Pregenerated sensors for TLCD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000160606Ensembl transcript IDs: ENST00000292090.8, ENST00000394933.7, ENST00000580518.1, ENST00000581236.1
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CAGAGGACACCCAGGCTTGGGGCTAAGTCCCAGTGTCCATATGAAGCTGTTTCTTTGTCCCAGGCTCTGTaGCCCTCACTCAGTCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: QRTPRLGAKSQCPYEAVSLSQAL*PSLSQE Trigger: TTCTTGACTGAGTGAGGGGCACAGAGCCTGGGACAA...AGAAACAGCTTCATATGGACACTGGGACTTAGCCCCAAGCCTGGGTGTCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581236.1 |
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| 3UTR GCA 72 bp | TTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTaGCCCTCACTCAGTCAAGAACTTGTCTTTGTGTTG | + |
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Preference number: 3 (lower is better) Translates to: FWPCPFLLSQAL*PSLSQELVFVL Trigger: CAACACAAAGACAAGTTCTTGACTGAGTGAGGGGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000581236.1 |
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| 3UTR-3UTR CAA 90 bp | CCGTTTTTGTTGTCCCAGGCTCTGTGCCCCTCACTCAGTCAAGAACTTGTCTTTAAGCTGTTTCTGGCCTaGTCCGTTTTTGTTGTCCCA | + |
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Preference number: 3 (lower is better) Translates to: PFLLSQALCPSLSQELVFKLFLA*SVFVVP Trigger: TGGGACAACAAAAACGGACAAGGCCAGAAACAGCTT...AAAGACAAGTTCTTGACTGAGTGAGGGGCACAGAGCCTGGGACAACAAAAACGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000581236.1 |
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| CDS-3UTR GCA 90 bp | GGCCTCAGAGGACACCCAGGCTTGGGGCTAAGTCCCAGTGTCCATATGAAGCTGGGGTCGGCGCGCACGTaGACGGGTAGGGGCAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: GLRGHPGLGLSPSVHMKLGSART*TGRGRR Trigger: TCGCCTGCCCCTACCCGTGCACGTGCGCGCCGACCC...CAGCTTCATATGGACACTGGGACTTAGCCCCAAGCCTGGGTGTCCTCTGAGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS-3UTR GCA 90 bp | GGCCTCAGAGGACACCCAGGCTTGGGGCTAAGTCCCAGTGTCCATATGAAGCTGAGCGGCAGGGCGGGGTaGAGCAGTCGGGGCATGCTG | + |
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Preference number: 4 (lower is better) Translates to: GLRGHPGLGLSPSVHMKLSGRAG*SSRGML Trigger: CAGCATGCCCCGACTGCTGCACCCCGCCCTGCCGCT...CAGCTTCATATGGACACTGGGACTTAGCCCCAAGCCTGGGTGTCCTCTGAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS-3UTR GCA 90 bp | GGACACCCAGGCTTGGGGCTAAGTCCCAGTGTCCATATGAAGCTGTTTCTGGCCGAGACGAGCAGGTTGTaGCAGCGCCAGGTGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GHPGLGLSPSVHMKLFLAETSRL*QRQVRR Trigger: CCTGCGCACCTGGCGCTGGCACAACCTGCTCGTCTC...GGCCAGAAACAGCTTCATATGGACACTGGGACTTAGCCCCAAGCCTGGGTGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS-3UTR TCA 90 bp | GGCCTCAGAGGACACCCAGGCTTGGGGCTAAGTCCCAGTGTCCATATGAAGCTGTCATCACGTCCAGCATaGGCAGGATACCCAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GLRGHPGLGLSPSVHMKLSSRPA*AGYPAG Trigger: TCCTGCTGGGTATCCTGCTCATGCTGGACGTGATGA...CAGCTTCATATGGACACTGGGACTTAGCCCCAAGCCTGGGTGTCCTCTGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000581236.1 |
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| CDS-3UTR GCA 90 bp | AGTCCCAGTGTCCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGCAGCAGTCGGGGCATaGTGGCCCTCCCTGCCGTCC | + |
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Preference number: 4 (lower is better) Translates to: SPSVHMKLFLALSVFVVPAAVGA*WPSLPS Trigger: GGACGGCAGGGAGGGCCAGCATGCCCCGACTGCTGC...TGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGGACACTGGGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS-3UTR CCA 90 bp | GGAGTACTTTCATTAGTGTTTTCAATAGTGTGGGCGCAGGCTCAGAAGGTGGAGCCCGGAAGGTCAGCGTaGCGCCCAGGAGCAGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: GVLSLVFSIVWAQAQKVEPGRSA*RPGAAA Trigger: TGCCGCTGCTCCTGGGCGCCACGCTGACCTTCCGGG...CTCCACCTTCTGAGCCTGCGCCCACACTATTGAAAACACTAATGAAAGTACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS-3UTR CCA 90 bp | CCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCCGGCTCCCCGGAGGCTaGGCAAGCAAGACCTCCGAT | + |
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Preference number: 4 (lower is better) Translates to: PYEAVSGLVRFCCPRLCARLPGG*ASKTSD Trigger: ATCGGAGGTCTTGCTTGCCCAGCCTCCGGGGAGCCG...GGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394933.7 |
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| CDS-3UTR CCA 90 bp | CATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCCCGGCTCTTAAACTCCTaGGGCCGGGCGGCTGTCACA | + |
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Preference number: 4 (lower is better) Translates to: HMKLFLALSVFVVPGSVPRLLNS*GRAAVT Trigger: TGTGACAGCCGCCCGGCCCCAGGAGTTTAAGAGCCG...GGGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394933.7 |
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| CDS-3UTR GCA 90 bp | GGACACCCAGGCTTGGGGCTAAGTCCCAGTGTCCATATGAAGCTGTTTCTGGCCTTGTCCCAGGCTCTGTaGCCCTCACTCAGTCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: GHPGLGLSPSVHMKLFLALSQAL*PSLSQE Trigger: TTCTTGACTGAGTGAGGGGCACAGAGCCTGGGACAA...GGCCAGAAACAGCTTCATATGGACACTGGGACTTAGCCCCAAGCCTGGGTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000581236.1 |
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| CDS-3UTR TCA 90 bp | CCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCGCACTTGGGAACTGCTaGGTAACCCATCGCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: PYEAVSGLVRFCCPRLCAALGNC*VTHRHL Trigger: GAGGTGGCGATGGGTTACTCAGCAGTTCCCAAGTGC...GGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394933.7 |
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| CDS-3UTR GCA 90 bp | CCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCTACCCAGCAGGAAGGTaGCCAGGGTCCTCTGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: PYEAVSGLVRFCCPRLCAYPAGR*PGSSGS Trigger: TGAACCAGAGGACCCTGGGCACCTTCCTGCTGGGTA...GGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000394933.7 |
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| CDS-3UTR CCA 90 bp | CATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCCCGCGAGGTGGGCACTTaGGAACTGCTGAGTAACCCA | + |
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Preference number: 4 (lower is better) Translates to: HMKLFLALSVFVVPGSVPREVGT*ELLSNP Trigger: TGGGTTACTCAGCAGTTCCCAAGTGCCCACCTCGCG...GGGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394933.7 |
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| CDS-3UTR TCA 90 bp | GTACTTTCATTAGTGTTTTCAATAGTGTGGGCGCAGGCTCAGAAGGTGGAGAGGCCCGACACAATGGAGTaGGCGAAGGAGACGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VLSLVFSIVWAQAQKVERPDTME*AKETSR Trigger: CCTGCTCGTCTCCTTCGCTCACTCCATTGTGTCGGG...CCTCTCCACCTTCTGAGCCTGCGCCCACACTATTGAAAACACTAATGAAAGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS-3UTR TCA 90 bp | CCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCCCACCGTATCGTGGATaGAATACCCCGCAGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: PYEAVSGLVRFCCPRLCAPPYRG*NTPQRS Trigger: GCTTCTCTGCGGGGTATTTCATCCACGATACGGTGG...GGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000394933.7 |
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| CDS-3UTR TCA 90 bp | CATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCCCCACCGTATCGTGGATaGAATACCCCGCAGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: HMKLFLALSVFVVPGSVPPPYRG*NTPQRS Trigger: GCTTCTCTGCGGGGTATTTCATCCACGATACGGTGG...GGGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000394933.7 |
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| CDS-3UTR TCA 90 bp | CATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCCTCATCACGTCCAGCATaGGCAGGATACCCAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: HMKLFLALSVFVVPGSVPSSRPA*AGYPAG Trigger: TCCTGCTGGGTATCCTGCTCATGCTGGACGTGATGA...GGGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000292090.8 ENST00000394933.7 ENST00000581236.1 |
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| CDS-3UTR GCA 90 bp | CAGAGGACACCCAGGCTTGGGGCTAAGTCCCAGTGTCCATATGAAGCTGTTTCTCCATACACACAGCAGTaGCCAGATCCCCGACACAAT | + |
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Preference number: 4 (lower is better) Translates to: QRTPRLGAKSQCPYEAVSPYTQQ*PDPRHN Trigger: ATTGTGTCGGGGATCTGGGCACTGCTGTGTGTATGG...AGAAACAGCTTCATATGGACACTGGGACTTAGCCCCAAGCCTGGGTGTCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS-3UTR GCA 90 bp | CATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCCCCCCACCGACAAAGCTaGTCCAAAAGATGCCGGAGA | + |
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Preference number: 4 (lower is better) Translates to: HMKLFLALSVFVVPGSVPPHRQS*SKRCRR Trigger: TCTCCGGCATCTTTTGGAGCAGCTTTGTCGGTGGGG...GGGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATG 53% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000394933.7 |
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| CDS-3UTR GCA 90 bp | GGGGCTAAGTCCCAGTGTCCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTACCCAGCAGGAAGGTaGCCAGGGTCCTCTGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: GAKSQCPYEAVSGLVRFCYPAGR*PGSSGS Trigger: TGAACCAGAGGACCCTGGGCACCTTCCTGCTGGGTA...ACAAAAACGGACAAGGCCAGAAACAGCTTCATATGGACACTGGGACTTAGCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS-3UTR CCA 90 bp | AAGTCCCAGTGTCCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGAAGGTGGAGAGGCTaGCCTCAGAGGACACCCAGG | + |
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Preference number: 4 (lower is better) Translates to: KSQCPYEAVSGLVRFCCPRRWRG*PQRTPR Trigger: CCTGGGTGTCCTCTGAGGCCAGCCTCTCCACCTTCT...GGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGGACACTGGGACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000581236.1 |
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| 3UTR CAA 72 bp | CTAAGTCCCAGTGTCCATATGAAGCTGTTTCTGGCCTaGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LSPSVHMKLFLA*SVFVVPGSVPL Trigger: GAGGGGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGGACACTGGGACTTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000581236.1 |
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| CDS-3UTR TCA 90 bp | CATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCCCCCATGGCCATGACGTaGTGGACAAGGTATTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: HMKLFLALSVFVVPGSVPPMAMT*WTRYSQ Trigger: TTGGGAATACCTTGTCCATCACGTCATGGCCATGGG...GGGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000394933.7 |
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| CDS-3UTR TCA 90 bp | CCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCAGGCACCCATGGCCATaGCGTGATGGACAAGGTATT | + |
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Preference number: 4 (lower is better) Translates to: PYEAVSGLVRFCCPRLCARHPWP*RDGQGI Trigger: AATACCTTGTCCATCACGTCATGGCCATGGGTGCCT...GGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000394933.7 |
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| CDS-3UTR GCA 90 bp | CAGTGTCCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCCCCCACCGACAAAGCTaGTCCAAAAGATGCCGGAGA | + |
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Preference number: 4 (lower is better) Translates to: QCPYEAVSGLVRFCCPRLPHRQS*SKRCRR Trigger: TCTCCGGCATCTTTTGGAGCAGCTTTGTCGGTGGGG...GAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGGACACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS-3UTR GCA 90 bp | CCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCTTGTCCCAGGCTCTGTaGCCCTCACTCAGTCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: PYEAVSGLVRFCCPRLCALSQAL*PSLSQE Trigger: TTCTTGACTGAGTGAGGGGCACAGAGCCTGGGACAA...GGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000292090.8 ENST00000394933.7 ENST00000581236.1 |
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| CDS-3UTR GCA 90 bp | CATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCCAACATGTCAGGAGTCTaGCATACACTGTCCCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: HMKLFLALSVFVVPGSVPNMSGV*HTLSLP Trigger: CGGGAGGGACAGTGTATGGCAGACTCCTGACATGTT...GGGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394933.7 |
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| CDS-3UTR CCA 90 bp | AGAGGAGTACTTTCATTAGTGTTTTCAATAGTGTGGGCGCAGGCTCAGAAGGTGAGAAGGTGGAGAGGCTaGCCTCAGAGGACACCCAGG | + |
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Preference number: 4 (lower is better) Translates to: RGVLSLVFSIVWAQAQKVRRWRG*PQRTPR Trigger: CCTGGGTGTCCTCTGAGGCCAGCCTCTCCACCTTCT...CACCTTCTGAGCCTGCGCCCACACTATTGAAAACACTAATGAAAGTACTCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS-3UTR TCA 90 bp | CCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCCAAATAGCCAGAAAGTaGCCACGCCGTCTCAATCTC | + |
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Preference number: 4 (lower is better) Translates to: PYEAVSGLVRFCCPRLCAQIARK*PRRLNL Trigger: GAGATTGAGACGGCGTGGTCACTTTCTGGCTATTTG...GGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000394933.7 |
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| CDS-3UTR TCA 90 bp | AGTCCCAGTGTCCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCATCATCACGTCCAGCATaGGCAGGATACCCAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SPSVHMKLFLALSVFVVPSSRPA*AGYPAG Trigger: TCCTGCTGGGTATCCTGCTCATGCTGGACGTGATGA...TGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGGACACTGGGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000581236.1 |
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| CDS-3UTR GCA 90 bp | TGGCCTCAGAGGACACCCAGGCTTGGGGCTAAGTCCCAGTGTCCATATGAAGCTAACTTGTCTTTGTGTTaGTTCTTGGGGACATGCTCA | + |
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Preference number: 4 (lower is better) Translates to: WPQRTPRLGAKSQCPYEANLSLC*FLGTCS Trigger: TGAGCATGTCCCCAAGAAGCAACACAAAGACAAGTT...AGCTTCATATGGACACTGGGACTTAGCCCCAAGCCTGGGTGTCCTCTGAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000581236.1 |
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| CDS-3UTR GCA 90 bp | CCGTTTTTGTTGTCCCAGGCTCTGTGCCCCTCACTCAGTCAAGAACTTGTCTTTTTGTCCCAGGCTCTGTaGCCCTCACTCAGTCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: PFLLSQALCPSLSQELVFLSQAL*PSLSQE Trigger: TTCTTGACTGAGTGAGGGGCACAGAGCCTGGGACAA...AAAGACAAGTTCTTGACTGAGTGAGGGGCACAGAGCCTGGGACAACAAAAACGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000581236.1 |
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| CDS-3UTR CCA 90 bp | AGGAGTACTTTCATTAGTGTTTTCAATAGTGTGGGCGCAGGCTCAGAAGGTGGACTCCTAGGTCTGTTCTaGGAACCGGGATCCCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: RSTFISVFNSVGAGSEGGLLGLF*EPGSLS Trigger: CGAGAGGGATCCCGGTTCCCAGAACAGACCTAGGAG...TCCACCTTCTGAGCCTGCGCCCACACTATTGAAAACACTAATGAAAGTACTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS-3UTR CCA 90 bp | CCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCATGTCCACCGTATCGTaGATGAAATACCCCGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PYEAVSGLVRFCCPRLCAMSTVS*MKYPAE Trigger: CTCTGCGGGGTATTTCATCCACGATACGGTGGACAT...GGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000394933.7 |
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| CDS-3UTR CCA 90 bp | CATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCCGTGTTTTCAATAGTGTaGGCGCAGGCTCAGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: HMKLFLALSVFVVPGSVPVFSIV*AQAQKV Trigger: CACCTTCTGAGCCTGCGCCCACACTATTGAAAACAC...GGGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000581236.1 |
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| CDS-3UTR TCA 90 bp | GGGGCTAAGTCCCAGTGTCCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTCAAATAGCCAGAAAGTaGCCACGCCGTCTCAATCTC | + |
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Preference number: 4 (lower is better) Translates to: GAKSQCPYEAVSGLVRFCQIARK*PRRLNL Trigger: GAGATTGAGACGGCGTGGTCACTTTCTGGCTATTTG...ACAAAAACGGACAAGGCCAGAAACAGCTTCATATGGACACTGGGACTTAGCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS-3UTR TCA 90 bp | AAGTCCCAGTGTCCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCCCCATGGCCATGACGTaGTGGACAAGGTATTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: KSQCPYEAVSGLVRFCCPPMAMT*WTRYSQ Trigger: TTGGGAATACCTTGTCCATCACGTCATGGCCATGGG...GGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGGACACTGGGACTT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS-3UTR TCA 90 bp | GTACTTTCATTAGTGTTTTCAATAGTGTGGGCGCAGGCTCAGAAGGTGGAGAGGAGGCACCCATGGCCATaGCGTGATGGACAAGGTATT | + |
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Preference number: 4 (lower is better) Translates to: VLSLVFSIVWAQAQKVERRHPWP*RDGQGI Trigger: AATACCTTGTCCATCACGTCATGGCCATGGGTGCCT...CCTCTCCACCTTCTGAGCCTGCGCCCACACTATTGAAAACACTAATGAAAGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS-3UTR GCA 90 bp | AGTGTCCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTTACCCAGCAGGAAGGTaGCCAGGGTCCTTTGTTAAC | + |
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Preference number: 4 (lower is better) Translates to: SVHMKLFLALSVFVVPGSYPAGR*PGSFVN Trigger: GTTAACAAAGGACCCTGGGCACCTTCCTGCTGGGTA...AGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGGACACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000581236.1 |
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| CDS-3UTR CCA 90 bp | CTTGGGGCTAAGTCCCAGTGTCCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTATGTCCACCGTATCGTaGATGAAATACCCCGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LGAKSQCPYEAVSGLVRFMSTVS*MKYPAE Trigger: CTCTGCGGGGTATTTCATCCACGATACGGTGGACAT...AAAACGGACAAGGCCAGAAACAGCTTCATATGGACACTGGGACTTAGCCCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS-3UTR TCA 90 bp | CAGAGGACACCCAGGCTTGGGGCTAAGTCCCAGTGTCCATATGAAGCTGTTTCTGATCCTGGGCATTACTaGTTTTCATCATCATGCGAA | + |
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Preference number: 4 (lower is better) Translates to: QRTPRLGAKSQCPYEAVSDPGHY*FSSSCE Trigger: TTCGCATGATGATGAAAATCAGTAATGCCCAGGATC...AGAAACAGCTTCATATGGACACTGGGACTTAGCCCCAAGCCTGGGTGTCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000581236.1 |
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| CDS-3UTR GCA 90 bp | AAGTCCCAGTGTCCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAACATGTCAGGAGTCTaGCATACACACAGCAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: KSQCPYEAVSGLVRFCCPNMSGV*HTHSSA Trigger: GGCACTGCTGTGTGTATGGCAGACTCCTGACATGTT...GGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGGACACTGGGACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS-3UTR CCA 90 bp | AGGAGTACTTTCATTAGTGTTTTCAATAGTGTGGGCGCAGGCTCAGAAGGTGGAAGATCCCCGACACAATaGAGTGAGCGAAGGAGACGA | + |
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Preference number: 4 (lower is better) Translates to: RSTFISVFNSVGAGSEGGRSPTQ*SERRRR Trigger: TCGTCTCCTTCGCTCACTCCATTGTGTCGGGGATCT...TCCACCTTCTGAGCCTGCGCCCACACTATTGAAAACACTAATGAAAGTACTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS-3UTR CCA 90 bp | AGTCCCAGTGTCCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGTGTTTTCAATAGTGTaGGCGCAGGCTCAGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPSVHMKLFLALSVFVVPVFSIV*AQAQKV Trigger: CACCTTCTGAGCCTGCGCCCACACTATTGAAAACAC...TGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGGACACTGGGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000581236.1 |
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| CDS-3UTR TCA 90 bp | CCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCGATCCTGGGCATTACTaGTTTTCATCATCATGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PYEAVSGLVRFCCPRLCADPGHY*FSSSCE Trigger: TTCGCATGATGATGAAAATCAGTAATGCCCAGGATC...GGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000292090.8 ENST00000394933.7 ENST00000581236.1 |
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| CDS-3UTR GCA 90 bp | CCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCAACTTGTCTTTGTGTTaGTTCTTGGGGACATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PYEAVSGLVRFCCPRLCANLSLC*FLGTCS Trigger: TGAGCATGTCCCCAAGAAGCAACACAAAGACAAGTT...GGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000292090.8 ENST00000394933.7 ENST00000581236.1 |
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| CDS-3UTR GCA 90 bp | GGAGTACTTTCATTAGTGTTTTCAATAGTGTGGGCGCAGGCTCAGAAGGTGGAGAACTTGTCTTTGTGTTaGTTCTTGGGGACATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GVLSLVFSIVWAQAQKVENLSLC*FLGTCS Trigger: TGAGCATGTCCCCAAGAAGCAACACAAAGACAAGTT...CTCCACCTTCTGAGCCTGCGCCCACACTATTGAAAACACTAATGAAAGTACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS GCA 90 bp | AGCAGGTTGTGCCAGCGCCAGGTGCGCAGGGGGTCGGCGCGCACGTaGACGGGTAGGGGCAGGCGACAGAGCGCGCGCCGGAGCGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SRLCQRQVRRGSART*TGRGRRQSARRSAR Trigger: CCGGGCGCTCCGGCGCGCGCTCTGTCGCCTGCCCCTACCCGTGCACGTGCGCGCCGACCCCCTGCGCACCTGGCGCTGGCACAACCTGCT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS CCA 90 bp | GAGTCTGCCATACACTGTCCCTCCCGCGCCCGCGAGGTGGGCACTTaGGAACTGCTGAGTAACCCATCGCCACCTCTTCCCGCCGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ESAIHCPSRAREVGT*ELLSNPSPPLPAGS Trigger: AGAGCCGGCGGGAAGAGGTGGCGATGGGTTACTCAGCAGTTCCCAAGTGCCCACCTCGCGGGCGCGGGAGGGACAGTGTATGGCAGACTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394933.7 |
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| CDS CCA 90 bp | CAGGAGTCTGCCATACACACAGCAGTGCCCAGATCCCCGACACAATaGAGTGAGCGAAGGAGACGAGCAGGTTGTGCCAGCGCCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QESAIHTAVPRSPTQ*SERRRRAGCASARC Trigger: GCACCTGGCGCTGGCACAACCTGCTCGTCTCCTTCGCTCACTCCATTGTGTCGGGGATCTGGGCACTGCTGTGTGTATGGCAGACTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS-3UTR CAA 90 bp | TGGCCTCAGAGGACACCCAGGCTTGGGGCTAAGTCCCAGTGTCCATATGAAGCTCCTTGTCCGTTTTTGTaGTCCCAGGCTCTGTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: WPQRTPRLGAKSQCPYEAPCPFL*SQALCP Trigger: GGGGCACAGAGCCTGGGACAACAAAAACGGACAAGG...AGCTTCATATGGACACTGGGACTTAGCCCCAAGCCTGGGTGTCCTCTGAGGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000581236.1 |
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| CDS-3UTR CAA 90 bp | GCTAAGTCCCAGTGTCCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTAAGGAGACGAGCAGGTaGTGCCAGCGCCAGGTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: AKSQCPYEAVSGLVRFCCKETSR*CQRQVR Trigger: GCGCACCTGGCGCTGGCACAACCTGCTCGTCTCCTT...ACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGGACACTGGGACTTAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS-3UTR CAA 90 bp | GGCCTCAGAGGACACCCAGGCTTGGGGCTAAGTCCCAGTGTCCATATGAAGCTGATGGTGAGGAAGATGTaGCTGACTTCCACCAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: GLRGHPGLGLSPSVHMKLMVRKM*LTSTSS Trigger: ACTACTGGTGGAAGTCAGCAACATCTTCCTCACCAT...CAGCTTCATATGGACACTGGGACTTAGCCCCAAGCCTGGGTGTCCTCTGAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000581236.1 |
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| CDS-3UTR CAA 90 bp | CCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCCCTTGTCCGTTTTTGTaGTCCCAGGCTCTGTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PYEAVSGLVRFCCPRLCAPCPFL*SQALCP Trigger: GGGGCACAGAGCCTGGGACAACAAAAACGGACAAGG...GGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000292090.8 ENST00000394933.7 ENST00000581236.1 |
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| CDS-3UTR CAA 90 bp | CTTGGGGCTAAGTCCCAGTGTCCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTAGAGGACACCCAGGCTaGGGGCTAAGTCCCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LGAKSQCPYEAVSGLVRFRGHPG*GLSPSV Trigger: GACACTGGGACTTAGCCCCAAGCCTGGGTGTCCTCT...AAAACGGACAAGGCCAGAAACAGCTTCATATGGACACTGGGACTTAGCCCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000581236.1 |
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| CDS-3UTR CAA 90 bp | TCCCAGTGTCCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGAGAGGACACCCAGGCTaGGGGCTAAGTCCCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SQCPYEAVSGLVRFCCPRRGHPG*GLSPSV Trigger: GACACTGGGACTTAGCCCCAAGCCTGGGTGTCCTCT...CCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGGACACTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000581236.1 |
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| CDS-3UTR CAA 90 bp | CAGTGTCCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCCCTTGTCCGTTTTTGTaGTCCCAGGCTCTGTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QCPYEAVSGLVRFCCPRLPCPFL*SQALCP Trigger: GGGGCACAGAGCCTGGGACAACAAAAACGGACAAGG...GAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGGACACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000581236.1 |
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| CDS-3UTR CAA 90 bp | CAGAGGACACCCAGGCTTGGGGCTAAGTCCCAGTGTCCATATGAAGCTGTTTCTAAGCTGTTTCTGGCCTaGTCCGTTTTTGTTGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QRTPRLGAKSQCPYEAVSKLFLA*SVFVVP Trigger: TGGGACAACAAAAACGGACAAGGCCAGAAACAGCTT...AGAAACAGCTTCATATGGACACTGGGACTTAGCCCCAAGCCTGGGTGTCCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000581236.1 |
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| CDS-3UTR CAA 90 bp | CATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCCATGGTGAGGAAGATGTaGCTGACTTCCACCAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: HMKLFLALSVFVVPGSVPMVRKM*LTSTSS Trigger: ACTACTGGTGGAAGTCAGCAACATCTTCCTCACCAT...GGGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000292090.8 ENST00000394933.7 ENST00000581236.1 |
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| CDS-3UTR CAA 90 bp | CATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCCGAACTTGTCTTTGTGTaGCTTCTTGGGGACATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HMKLFLALSVFVVPGSVPELVFV*LLGDML Trigger: GAGCATGTCCCCAAGAAGCAACACAAAGACAAGTTC...GGGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000292090.8 ENST00000394933.7 ENST00000581236.1 |
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| CDS-3UTR CAA 90 bp | CATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCCAAGCTGTTTCTGGCCTaGTCCGTTTTTGTTGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HMKLFLALSVFVVPGSVPKLFLA*SVFVVP Trigger: TGGGACAACAAAAACGGACAAGGCCAGAAACAGCTT...GGGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000292090.8 ENST00000394933.7 ENST00000581236.1 |
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| CDS-3UTR CAA 90 bp | CCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCGTCAAGAACTTGTCTTaGTGTTGCTTCTTGGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: PYEAVSGLVRFCCPRLCAVKNLS*CCFLGT Trigger: TGTCCCCAAGAAGCAACACAAAGACAAGTTCTTGAC...GGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000292090.8 ENST00000394933.7 ENST00000581236.1 |
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| CDS-3UTR CAA 90 bp | GTCCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGAAGCTGTTTCTGGCCTaGTCCGTTTTTGTTGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VHMKLFLALSVFVVPGSVKLFLA*SVFVVP Trigger: TGGGACAACAAAAACGGACAAGGCCAGAAACAGCTT...CACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000581236.1 |
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| CDS-3UTR CAA 90 bp | GGAGTACTTTCATTAGTGTTTTCAATAGTGTGGGCGCAGGCTCAGAAGGTGGAGGAACTTGTCTTTGTGTaGCTTCTTGGGGACATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GVLSLVFSIVWAQAQKVEELVFV*LLGDML Trigger: GAGCATGTCCCCAAGAAGCAACACAAAGACAAGTTC...CTCCACCTTCTGAGCCTGCGCCCACACTATTGAAAACACTAATGAAAGTACTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS-3UTR CAA 90 bp | CAGTGTCCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCGTCAAGAACTTGTCTTaGTGTTGCTTCTTGGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: QCPYEAVSGLVRFCCPRLVKNLS*CCFLGT Trigger: TGTCCCCAAGAAGCAACACAAAGACAAGTTCTTGAC...GAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGGACACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000581236.1 |
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| CDS-3UTR CAA 90 bp | CCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTTGTTGTCCCAGGCTCTGTGCCCACTCAGTCAAGAACTaGTCTTTGTGTTGCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PYEAVSGLVRFCCPRLCAHSVKN*SLCCFL Trigger: CAAGAAGCAACACAAAGACAAGTTCTTGACTGAGTG...GGCACAGAGCCTGGGACAACAAAAACGGACAAGGCCAGAAACAGCTTCATATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000292090.8 ENST00000394933.7 ENST00000581236.1 |
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| CDS-3UTR CAA 90 bp | GTTGTCCCAGGCTCTGTGCCCCTCACTCAGTCAAGAACTTGTCTTTGTGTTGCTCACTCAGTCAAGAACTaGTCTTTGTGTTGCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VVPGSVPLTQSRTCLCVAHSVKN*SLCCFL Trigger: CAAGAAGCAACACAAAGACAAGTTCTTGACTGAGTG...AGCAACACAAAGACAAGTTCTTGACTGAGTGAGGGGCACAGAGCCTGGGACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581236.1 |
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| CDS-3UTR CAA 90 bp | CTTGGGGCTAAGTCCCAGTGTCCATATGAAGCTGTTTCTGGCCTTGTCCGTTTTCACTCAGTCAAGAACTaGTCTTTGTGTTGCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LGAKSQCPYEAVSGLVRFHSVKN*SLCCFL Trigger: CAAGAAGCAACACAAAGACAAGTTCTTGACTGAGTG...AAAACGGACAAGGCCAGAAACAGCTTCATATGGACACTGGGACTTAGCCCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000292090.8 ENST00000581236.1 |
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| CDS-3UTR CAA 90 bp | AGGAGTACTTTCATTAGTGTTTTCAATAGTGTGGGCGCAGGCTCAGAAGGTGGAGTCAAGAACTTGTCTTaGTGTTGCTTCTTGGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RSTFISVFNSVGAGSEGGVKNLS*CCFLGT Trigger: TGTCCCCAAGAAGCAACACAAAGACAAGTTCTTGAC...TCCACCTTCTGAGCCTGCGCCCACACTATTGAAAACACTAATGAAAGTACTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS GCA 72 bp | TGCCAGCGCCAGGTGCGCAGGGGGTCGGCGCGCACGTaGACGGGTAGGGGCAGGCGACAGAGCGCGCGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: CQRQVRRGSART*TGRGRRQSARR Trigger: CCGGCGCGCGCTCTGTCGCCTGCCCCTACCCGTGCACGTGCGCGCCGACCCCCTGCGCACCTGGCGCTGGCA 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS GCA 72 bp | GAGCGAAGGAGACGAGCAGGTTGTGCCAGCGCCAGGTaGGCAGGGGGTCGGCGCGCACGTGCACGGGTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ERRRRAGCASAR*AGGRRARARVG Trigger: CCCTACCCGTGCACGTGCGCGCCGACCCCCTGCGCACCTGGCGCTGGCACAACCTGCTCGTCTCCTTCGCTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS CCA 72 bp | CCCATCGCCACCTCTTCCCGCCGGCTCTTAAACTCCTaGGGCCGGGCGGCTGTCACAGTCCTCCCTCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: PIATSSRRLLNS*GRAAVTVLPQT Trigger: TGTCTGAGGGAGGACTGTGACAGCCGCCCGGCCCCAGGAGTTTAAGAGCCGGCGGGAAGAGGTGGCGATGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394933.7 |
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| CDS CCA 72 bp | ATACACTGTCCCTCCCGCGCCCGCGAGGTGGGCACTTaGGAACTGCTGAGTAACCCATCGCCACCTCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: IHCPSRAREVGT*ELLSNPSPPLP Trigger: GGGAAGAGGTGGCGATGGGTTACTCAGCAGTTCCCAAGTGCCCACCTCGCGGGCGCGGGAGGGACAGTGTAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394933.7 |
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| CDS CCA 72 bp | GCCATACACACAGCAGTGCCCAGATCCCCGACACAATaGAGTGAGCGAAGGAGACGAGCAGGTTGTGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AIHTAVPRSPTQ*SERRRRAGCAS Trigger: GCTGGCACAACCTGCTCGTCTCCTTCGCTCACTCCATTGTGTCGGGGATCTGGGCACTGCTGTGTGTATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292090.8 |
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| CDS GCA 72 bp | CCACCAGTAGTGTTAAGACACCCCCACCGACAAAGCTaGTCCAAAAGATGCCGGAGAAGAAGGCACCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: PPVVLRHPHRQS*SKRCRRRRHPW Trigger: CCATGGGTGCCTTCTTCTCCGGCATCTTTTGGAGCAGCTTTGTCGGTGGGGGTGTCTTAACACTACTGGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000292090.8 ENST00000394933.7 ENST00000580518.1 |
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| CDS CCA 72 bp | CGCGTCTGTCCGCTAGCCACGATGTCCACCGTATCGTaGATGAAATACCCCGCAGAGAAGCAAACGAGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RVCPLATMSTVS*MKYPAEKQTSK Trigger: TTTGCTCGTTTGCTTCTCTGCGGGGTATTTCATCCACGATACGGTGGACATCGTGGCTAGCGGACAGACGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000292090.8 ENST00000394933.7 ENST00000580518.1 |
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| CDS GCA 72 bp | CACGCCGTCTCAATCTCCACTAACATGTCAGGAGTCTaGCATACACATGTTGGCCAGGTTGGTCTCAAACTC | + |
|
Preference number: 6 (lower is better) Translates to: HAVSISTNMSGV*HTHVGQVGLKL Trigger: GAGTTTGAGACCAACCTGGCCAACATGTGTATGGCAGACTCCTGACATGTTAGTGGAGATTGAGACGGCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580518.1 |
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| CDS CAA 90 bp | TGGGCATTACTGATTTTCATCATCATGCGAATGGTGAGGAAGATGTaGCTGACTTCCACCAGTAGTGTTAAGACACCCCCACCGACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: WALLIFIIMRMVRKM*LTSTSSVKTPPPTK Trigger: CTTTGTCGGTGGGGGTGTCTTAACACTACTGGTGGAAGTCAGCAACATCTTCCTCACCATTCGCATGATGATGAAAATCAGTAATGCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000292090.8 ENST00000394933.7 ENST00000580518.1 |
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| CDS CAA 72 bp | CTGATTTTCATCATCATGCGAATGGTGAGGAAGATGTaGCTGACTTCCACCAGTAGTGTTAAGACACCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LIFIIMRMVRKM*LTSTSSVKTPP Trigger: TGGGGGTGTCTTAACACTACTGGTGGAAGTCAGCAACATCTTCCTCACCATTCGCATGATGATGAAAATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000292090.8 ENST00000394933.7 ENST00000580518.1 ENST00000581236.1 |
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