Pregenerated sensors for TIPIN (Homo sapiens)
Ensembl gene IDs: ENSG00000075131Ensembl transcript IDs: ENST00000261881.9, ENST00000562124.5, ENST00000566524.5, ENST00000570251.1
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAAACTTCAACTAGACTACTCTGGGCACACTGTCCATGGATTAGCCCTGCTTTGGGCAGGAGAATTGCTTaGGCCCAGGAGGCAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: KTSTRLLWAHCPWISPALGRRIA*AQEAEV Trigger: AACCTCTGCCTCCTGGGCTCAAGCAATTCTCCTGCC...CAAAGCAGGGCTAATCCATGGACAGTGTGCCCAGAGTAGTCTAGTTGAAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261881.9 ENST00000566524.5 |
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| 3UTR-3UTR GCA 90 bp | AAAACTTCAACTAGACTACTCTGGGCACACTGTCCATGGATTAGCCCTGCTTTGCCAAGACTGTGCCACTaGACTCCAGCCTGGCCAACA | + |
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Preference number: 2 (lower is better) Translates to: KTSTRLLWAHCPWISPALPRLCH*TPAWPT Trigger: TGTTGGCCAGGCTGGAGTGCAGTGGCACAGTCTTGG...CAAAGCAGGGCTAATCCATGGACAGTGTGCCCAGAGTAGTCTAGTTGAAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261881.9 ENST00000566524.5 |
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| 3UTR-3UTR CCA 90 bp | AAAACTTCAACTAGACTACTCTGGGCACACTGTCCATGGATTAGCCCTGCTTTGATTAGCCAAGCGTGGTaGCACACGCCTGTAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: KTSTRLLWAHCPWISPALISQAW*HTPVVP Trigger: TGGGACTACAGGCGTGTGCCACCACGCTTGGCTAAT...CAAAGCAGGGCTAATCCATGGACAGTGTGCCCAGAGTAGTCTAGTTGAAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261881.9 ENST00000566524.5 |
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| 3UTR-3UTR CCA 90 bp | AAAACTTCAACTAGACTACTCTGGGCACACTGTCCATGGATTAGCCCTGCTTTGAAAATTAGCCAAGCGTaGTGGCACACGCCTGTAGTC | + |
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Preference number: 2 (lower is better) Translates to: KTSTRLLWAHCPWISPALKISQA*WHTPVV Trigger: GACTACAGGCGTGTGCCACCACGCTTGGCTAATTTT...CAAAGCAGGGCTAATCCATGGACAGTGTGCCCAGAGTAGTCTAGTTGAAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000261881.9 ENST00000566524.5 |
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| 3UTR-3UTR TCA 90 bp | AAAACTTCAACTAGACTACTCTGGGCACACTGTCCATGGATTAGCCCTGCTTTGCGTTTTAAACAGGTCTaGACTTCCTTTTTACTTCCC | + |
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Preference number: 2 (lower is better) Translates to: KTSTRLLWAHCPWISPALRFKQV*TSFLLP Trigger: GGGAAGTAAAAAGGAAGTTCAGACCTGTTTAAAACG...CAAAGCAGGGCTAATCCATGGACAGTGTGCCCAGAGTAGTCTAGTTGAAGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000566524.5 |
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| CDS-3UTR TCA 90 bp | ACTAGACTACTCTGGGCACACTGTCCATGGATTAGCCCTGCTTTGCAAGGAGCAGGCAGGAGAATTGCTTaGGCCCAGGAGGCAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: TRLLWAHCPWISPALQGAGRRIA*AQEAEV Trigger: AACCTCTGCCTCCTGGGCTCAAGCAATTCTCCTGCC...TGCTCCTTGCAAAGCAGGGCTAATCCATGGACAGTGTGCCCAGAGTAGTCTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261881.9 ENST00000566524.5 |
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| CDS-3UTR GCA 90 bp | ACTAGACTACTCTGGGCACACTGTCCATGGATTAGCCCTGCTTTGCAAGGAGCACCAAGACTGTGCCACTaGACTCCAGCCTGGCCAACA | + |
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Preference number: 4 (lower is better) Translates to: TRLLWAHCPWISPALQGAPRLCH*TPAWPT Trigger: TGTTGGCCAGGCTGGAGTGCAGTGGCACAGTCTTGG...TGCTCCTTGCAAAGCAGGGCTAATCCATGGACAGTGTGCCCAGAGTAGTCTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261881.9 ENST00000566524.5 |
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| CDS-3UTR CCA 90 bp | ACTAGACTACTCTGGGCACACTGTCCATGGATTAGCCCTGCTTTGCAAGGAGCAATTAGCCAAGCGTGGTaGCACACGCCTGTAGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: TRLLWAHCPWISPALQGAISQAW*HTPVVP Trigger: TGGGACTACAGGCGTGTGCCACCACGCTTGGCTAAT...TGCTCCTTGCAAAGCAGGGCTAATCCATGGACAGTGTGCCCAGAGTAGTCTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261881.9 ENST00000566524.5 |
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| CDS-3UTR TCA 90 bp | ACTAGACTACTCTGGGCACACTGTCCATGGATTAGCCCTGCTTTGCAAGGAGCACAAGTCTTCAGCCTCTaGGCATCCAGCTTGGGTATA | + |
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Preference number: 4 (lower is better) Translates to: TRLLWAHCPWISPALQGAQVFSL*ASSLGI Trigger: TATACCCAAGCTGGATGCTCAGAGGCTGAAGACTTG...TGCTCCTTGCAAAGCAGGGCTAATCCATGGACAGTGTGCCCAGAGTAGTCTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566524.5 |
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| CDS-3UTR CCA 90 bp | ACTAGACTACTCTGGGCACACTGTCCATGGATTAGCCCTGCTTTGCAAGGAGCAAAAATTAGCCAAGCGTaGTGGCACACGCCTGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: TRLLWAHCPWISPALQGAKISQA*WHTPVV Trigger: GACTACAGGCGTGTGCCACCACGCTTGGCTAATTTT...TGCTCCTTGCAAAGCAGGGCTAATCCATGGACAGTGTGCCCAGAGTAGTCTAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000261881.9 ENST00000566524.5 |
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| CDS-3UTR CCA 90 bp | ACTAGACTACTCTGGGCACACTGTCCATGGATTAGCCCTGCTTTGCAAGGAGCATTTAACTGTTCTCTTTaGAGGTACACGAACAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: TRLLWAHCPWISPALQGAFNCSL*RYTNRC Trigger: GCACCTGTTCGTGTACCTCCAAAGAGAACAGTTAAA...TGCTCCTTGCAAAGCAGGGCTAATCCATGGACAGTGTGCCCAGAGTAGTCTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261881.9 ENST00000566524.5 |
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| CDS-3UTR CCA 90 bp | AAAACTTCAACTAGACTACTCTGGGCACACTGTCCATGGATTAGCCCTGCTTTGTTTAACTGTTCTCTTTaGAGGTACACGAACAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: KTSTRLLWAHCPWISPALFNCSL*RYTNRC Trigger: GCACCTGTTCGTGTACCTCCAAAGAGAACAGTTAAA...CAAAGCAGGGCTAATCCATGGACAGTGTGCCCAGAGTAGTCTAGTTGAAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261881.9 ENST00000566524.5 |
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| CDS GCA 90 bp | CACCACACAGCGACACAGACTTCTTCTCAGCTGGGTCCACCTGCTTaGCTCGGGGCGACAGAGGGCGCCACGGCGTCCGCGACGGACCCC | + |
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Preference number: 5 (lower is better) Translates to: HHTATQTSSQLGPPA*LGATEGATASATDP Trigger: GGGGTCCGTCGCGGACGCCGTGGCGCCCTCTGTCGCCCCGAGGCAAGCAGGTGGACCCAGCTGAGAAGAAGTCTGTGTCGCTGTGTGGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570251.1 |
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| CDS CCA 90 bp | TCGGGGGCAGGCCGGTTACCGCAGAGGTGGAGGCCGCGCGGCACCTaGCCTGGAGAGCTCACCACACAGCGACACAGACTTCTTCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: SGAGRLPQRWRPRGT*PGELTTQRHRLLLS Trigger: GCTGAGAAGAAGTCTGTGTCGCTGTGTGGTGAGCTCTCCAGGCCAGGTGCCGCGCGGCCTCCACCTCTGCGGTAACCGGCCTGCCCCCGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000570251.1 |
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| CDS GCA 90 bp | AGCTCACCACACAGCGACACAGACTTCTTCTCAGCTGGGTCCACCTaGTTGCCTCGGGGCGACAGAGGGCGCCACGGCGTCCGCGACGGA | + |
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Preference number: 5 (lower is better) Translates to: SSPHSDTDFFSAGST*LPRGDRGRHGVRDG Trigger: TCCGTCGCGGACGCCGTGGCGCCCTCTGTCGCCCCGAGGCAAGCAGGTGGACCCAGCTGAGAAGAAGTCTGTGTCGCTGTGTGGTGAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570251.1 |
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| CDS CCA 90 bp | GGCAGGCCGGTTACCGCAGAGGTGGAGGCCGCGCGGCACCTGGCCTaGAGAGCTCACCACACAGCGACACAGACTTCTTCTCAGCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: GRPVTAEVEAARHLA*RAHHTATQTSSQLG Trigger: ACCCAGCTGAGAAGAAGTCTGTGTCGCTGTGTGGTGAGCTCTCCAGGCCAGGTGCCGCGCGGCCTCCACCTCTGCGGTAACCGGCCTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570251.1 |
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| CDS CCA 90 bp | TGGCCTGGAGAGCTCACCACACAGCGACACAGACTTCTTCTCAGCTaGGTCCACCTGCTTGCCTCGGGGCGACAGAGGGCGCCACGGCGT | + |
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Preference number: 5 (lower is better) Translates to: WPGELTTQRHRLLLS*VHLLASGRQRAPRR Trigger: ACGCCGTGGCGCCCTCTGTCGCCCCGAGGCAAGCAGGTGGACCCAGCTGAGAAGAAGTCTGTGTCGCTGTGTGGTGAGCTCTCCAGGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000562124.5 ENST00000570251.1 |
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| CDS CCA 90 bp | GGTTCTAGCATCTTTTCCTCGCAGAGGTGGAGGCCGCGCGGCACCTaGCCTGGAGAGCTCACCACACAGCGACACAGACTTCTTCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: GSSIFSSQRWRPRGT*PGELTTQRHRLLLS Trigger: GCTGAGAAGAAGTCTGTGTCGCTGTGTGGTGAGCTCTCCAGGCCAGGTGCCGCGCGGCCTCCACCTCTGCGAGGAAAAGATGCTAGAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562124.5 |
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| CDS CCA 72 bp | GGACAGGGGTCGGGGGCAGGCCGGTTACCGCAGAGGTaGAGGCCGCGCGGCACCTGGCCTGGAGAGCTCACC | + |
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Preference number: 6 (lower is better) Translates to: GQGSGAGRLPQR*RPRGTWPGELT Trigger: GGTGAGCTCTCCAGGCCAGGTGCCGCGCGGCCTCCACCTCTGCGGTAACCGGCCTGCCCCCGACCCCTGTCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000570251.1 |
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| CDS CAA 90 bp | TCACCACACAGCGACACAGACTTCTTCTCAGCTGGGTCCACCTGCTaGCCTCGGGGCGACAGAGGGCGCCACGGCGTCCGCGACGGACCC | + |
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Preference number: 6 (lower is better) Translates to: SPHSDTDFFSAGSTC*PRGDRGRHGVRDGP Trigger: GGGTCCGTCGCGGACGCCGTGGCGCCCTCTGTCGCCCCGAGGCAAGCAGGTGGACCCAGCTGAGAAGAAGTCTGTGTCGCTGTGTGGTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570251.1 |
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| CDS CCA 72 bp | GGCCGGTTACCGCAGAGGTGGAGGCCGCGCGGCACCTaGCCTGGAGAGCTCACCACACAGCGACACAGACTT | + |
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Preference number: 6 (lower is better) Translates to: GRLPQRWRPRGT*PGELTTQRHRL Trigger: AAGTCTGTGTCGCTGTGTGGTGAGCTCTCCAGGCCAGGTGCCGCGCGGCCTCCACCTCTGCGGTAACCGGCC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570251.1 |
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| CDS CAA 72 bp | AGCGACACAGACTTCTTCTCAGCTGGGTCCACCTGCTaGCCTCGGGGCGACAGAGGGCGCCACGGCGTCCGC | + |
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Preference number: 6 (lower is better) Translates to: SDTDFFSAGSTC*PRGDRGRHGVR Trigger: GCGGACGCCGTGGCGCCCTCTGTCGCCCCGAGGCAAGCAGGTGGACCCAGCTGAGAAGAAGTCTGTGTCGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570251.1 |
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| CDS GCA 72 bp | CACAGCGACACAGACTTCTTCTCAGCTGGGTCCACCTaGTTGCCTCGGGGCGACAGAGGGCGCCACGGCGTC | + |
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Preference number: 6 (lower is better) Translates to: HSDTDFFSAGST*LPRGDRGRHGV Trigger: GACGCCGTGGCGCCCTCTGTCGCCCCGAGGCAAGCAGGTGGACCCAGCTGAGAAGAAGTCTGTGTCGCTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000562124.5 ENST00000570251.1 |
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| CDS CCA 72 bp | TTCCTCGCAGAGGTGGAGGCCGCGCGGCACCTGGCCTaGAGAGCTCACCACACAGCGACACAGACTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: FLAEVEAARHLA*RAHHTATQTSS Trigger: AGAAGAAGTCTGTGTCGCTGTGTGGTGAGCTCTCCAGGCCAGGTGCCGCGCGGCCTCCACCTCTGCGAGGAA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562124.5 |
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| CDS CCA 72 bp | GTTACCGCAGAGGTGGAGGCCGCGCGGCACCTGGCCTaGAGAGCTCACCACACAGCGACACAGACTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VTAEVEAARHLA*RAHHTATQTSS Trigger: AGAAGAAGTCTGTGTCGCTGTGTGGTGAGCTCTCCAGGCCAGGTGCCGCGCGGCCTCCACCTCTGCGGTAAC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570251.1 |
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| CDS CCA 72 bp | ATCTTTTCCTCGCAGAGGTGGAGGCCGCGCGGCACCTaGCCTGGAGAGCTCACCACACAGCGACACAGACTT | + |
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Preference number: 6 (lower is better) Translates to: IFSSQRWRPRGT*PGELTTQRHRL Trigger: AAGTCTGTGTCGCTGTGTGGTGAGCTCTCCAGGCCAGGTGCCGCGCGGCCTCCACCTCTGCGAGGAAAAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562124.5 |
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