RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TIMP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000100234

Ensembl transcript IDs: ENST00000266085.7

Found 331 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTCAGGTGCCTCACACTCAGCCTTCACCCAAGTTCCTCCTTGTGTaGGAGAGGCTGACCACACCAGGGAGTGCGAATGGCCAGATGCCT +
Preference number: 1 (lower is better)
Translates to: LQVPHTQPSPKFLLV*ERLTTPGSANGQMP
Trigger: AGGCATCTGGCCATTCGCACTCCCTGGTGTGGTCAGCCTCTCTCACACAAGGAGGAACTTGGGTGAAGGCTGAGTGTGAGGCACCTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR TCA 90 bp ACCTACCCTGGACAGAGCAGAGCACTGGCCCGAGAGCTGAGAGCCTaGGCATGGAGCTTCCTTGATTGGGAGGCAGAAGAGATGCCCAAA +
Preference number: 1 (lower is better)
Translates to: TYPGQSRALARELRA*AWSFLDWEAEEMPK
Trigger: TTTGGGCATCTCTTCTGCCTCCCAATCAAGGAAGCTCCATGCTCAGGCTCTCAGCTCTCGGGCCAGTGCTCTGCTCTGTCCAGGGTAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR GCA 90 bp CCCAAGGAAACCCGATGCCGGTACTCTCTTCCCACTCTGCGGTTCTaGCAAGCACCTTGCCTGGGCACTTGTGTGTGTGCAAGACTCTAC +
Preference number: 1 (lower is better)
Translates to: PKETRCRYSLPTLRF*QAPCLGTCVCARLY
Trigger: GTAGAGTCTTGCACACACACAAGTGCCCAGGCAAGGTGCTTGGCAGAACCGCAGAGTGGGAAGAGAGTACCGGCATCGGGTTTCCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR TCA 90 bp CTCACACTCAGCCTTCACCCAAGTTCCTCCTTGTGTGAGAGAGGCTaGCCACACCAGGGAGTGCGAATGGCCAGATGCCTCACAGAGAAG +
Preference number: 1 (lower is better)
Translates to: LTLSLHPSSSLCERG*PHQGVRMARCLTEK
Trigger: CTTCTCTGTGAGGCATCTGGCCATTCGCACTCCCTGGTGTGGTCAGCCTCTCTCACACAAGGAGGAACTTGGGTGAAGGCTGAGTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR TCA 90 bp CAGAGCACTGGCCCGAGAGCTGAGAGCCTGAGCATGGAGCTTCCTTaGTTGGGAGGCAGAAGAGATGCCCAAAGGAGGAAGCGAGAACTT +
Preference number: 1 (lower is better)
Translates to: QSTGPRAESLSMELP*LGGRRDAQRRKREL
Trigger: AAGTTCTCGCTTCCTCCTTTGGGCATCTCTTCTGCCTCCCAATCAAGGAAGCTCCATGCTCAGGCTCTCAGCTCTCGGGCCAGTGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR TCA 90 bp CCAGTATTACCTACCCTGGACAGAGCAGAGCACTGGCCCGAGAGCTaGGAGCCTGAGCATGGAGCTTCCTTGATTGGGAGGCAGAAGAGA +
Preference number: 1 (lower is better)
Translates to: PVLPTLDRAEHWPES*EPEHGASLIGRQKR
Trigger: TCTCTTCTGCCTCCCAATCAAGGAAGCTCCATGCTCAGGCTCTCAGCTCTCGGGCCAGTGCTCTGCTCTGTCCAGGGTAGGTAATACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 90 bp GCCGGTACTCTCTTCCCACTCTGCGGTTCTGCCAAGCACCTTGCCTaGGCACTTGTGTGTGTGCAAGACTCTACAGTGTGTTGTCTGCTG +
Preference number: 1 (lower is better)
Translates to: AGTLFPLCGSAKHLA*ALVCVQDSTVCCLL
Trigger: CAGCAGACAACACACTGTAGAGTCTTGCACACACACAAGTGCCCAGGCAAGGTGCTTGGCAGAACCGCAGAGTGGGAAGAGAGTACCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR GCA 90 bp AGCTCAAAACCGCCCTCTGACATCGCTTTGCGAAAGACCCTTCTTTaGCCAGGGCCTCCTCACCAAGGCCTAACAGATGGGGATGTGGTT +
Preference number: 1 (lower is better)
Translates to: SSKPPSDIALRKTLL*PGPPHQGLTDGDVV
Trigger: AACCACATCCCCATCTGTTAGGCCTTGGTGAGGAGGCCCTGGGCAAAGAAGGGTCTTTCGCAAAGCGATGTCAGAGGGCGGTTTTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR GCA 90 bp AAATTGATCCCAAGGAAACCCGATGCCGGTACTCTCTTCCCACTCTaGGGTTCTGCCAAGCACCTTGCCTGGGCACTTGTGTGTGTGCAA +
Preference number: 1 (lower is better)
Translates to: KLIPRKPDAGTLFPL*GSAKHLAWALVCVQ
Trigger: TTGCACACACACAAGTGCCCAGGCAAGGTGCTTGGCAGAACCGCAGAGTGGGAAGAGAGTACCGGCATCGGGTTTCCTTGGGATCAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 90 bp CTCTGTTATTCTGGCCTGGGTGCTTGCTCCAGACTCAGGAACATCTaGTCAACACAAGCATCACTGGGCTGGGGAATTGTGTGTGTGCTG +
Preference number: 1 (lower is better)
Translates to: LCYSGLGACSRLRNI*STQASLGWGIVCVL
Trigger: CAGCACACACACAATTCCCCAGCCCAGTGATGCTTGTGTTGACCAGATGTTCCTGAGTCTGGAGCAAGCACCCAGGCCAGAATAACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR GCA 90 bp TCTGGTCAACACAAGCATCACTGGGCTGGGGAATTGTGTGTGTGCTaGATCATCTCCGACTCTCTTGTAGTTCCTTCCTTCCCTCCCTCA +
Preference number: 1 (lower is better)
Translates to: SGQHKHHWAGELCVC*IISDSLVVPSFPPS
Trigger: TGAGGGAGGGAAGGAAGGAACTACAAGAGAGTCGGAGATGATGCAGCACACACACAATTCCCCAGCCCAGTGATGCTTGTGTTGACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR GCA 90 bp ACATCTGGTCAACACAAGCATCACTGGGCTGGGGAATTGTGTGTGTaGTGCATCATCTCCGACTCTCTTGTAGTTCCTTCCTTCCCTCCC +
Preference number: 1 (lower is better)
Translates to: TSGQHKHHWAGELCV*CIISDSLVVPSFPP
Trigger: GGGAGGGAAGGAAGGAACTACAAGAGAGTCGGAGATGATGCAGCACACACACAATTCCCCAGCCCAGTGATGCTTGTGTTGACCAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR GCA 90 bp ATGGGAAAGGTACACGGTAATGAAATTGATCCCAAGGAAACCCGATaGCGGTACTCTCTTCCCACTCTGCGGTTCTGCCAAGCACCTTGC +
Preference number: 1 (lower is better)
Translates to: MGKVHGNEIDPKETR*RYSLPTLRFCQAPC
Trigger: GCAAGGTGCTTGGCAGAACCGCAGAGTGGGAAGAGAGTACCGGCATCGGGTTTCCTTGGGATCAATTTCATTACCGTGTACCTTTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 90 bp GTGCTTGCTCCAGACTCAGGAACATCTGGTCAACACAAGCATCACTaGGCTGGGGAATTGTGTGTGTGCTGCATCATCTCCGACTCTCTT +
Preference number: 1 (lower is better)
Translates to: VLAPDSGTSGQHKHH*AGELCVCCIISDSL
Trigger: AAGAGAGTCGGAGATGATGCAGCACACACACAATTCCCCAGCCCAGTGATGCTTGTGTTGACCAGATGTTCCTGAGTCTGGAGCAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 90 bp AAAGACCCTTCTTTGCCCAGGGCCTCCTCACCAAGGCCTAACAGATaGGGATGTGGTTCTGCTAATTTATCGACTCCGCAGGGAAACTTC +
Preference number: 1 (lower is better)
Translates to: KDPSLPRASSPRPNR*GCGSANLSTPQGNF
Trigger: GAAGTTTCCCTGCGGAGTCGATAAATTAGCAGAACCACATCCCCATCTGTTAGGCCTTGGTGAGGAGGCCCTGGGCAAAGAAGGGTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 90 bp TGCTCCAGACTCAGGAACATCTGGTCAACACAAGCATCACTGGGCTaGGGAATTGTGTGTGTGCTGCATCATCTCCGACTCTCTTGTAGT +
Preference number: 1 (lower is better)
Translates to: CSRLRNIWSTQASLG*GIVCVLHHLRLSCS
Trigger: ACTACAAGAGAGTCGGAGATGATGCAGCACACACACAATTCCCCAGCCCAGTGATGCTTGTGTTGACCAGATGTTCCTGAGTCTGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 90 bp CAAAACATCAAGTCTGGGCTCATCCCTTCAAAACCAGTGACATGCTaGCATCAGCTTCTGCTCACACTGCCTCACAAAGAAGGCCAAGCC +
Preference number: 1 (lower is better)
Translates to: QNIKSGLIPSKPVTC*HQLLLTLPHKEGQA
Trigger: GGCTTGGCCTTCTTTGTGAGGCAGTGTGAGCAGAAGCTGATGCCAGCATGTCACTGGTTTTGAAGGGATGAGCCCAGACTTGATGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 90 bp ATCTCCCATGGCCCTGGATTCTTAGGAAAATCATGGCTTCCCAACTaGATGGGCAGCAGGACTTGGGGTGAAGTAAATGGTAGACTACCC +
Preference number: 1 (lower is better)
Translates to: ISHGPGFLGKSWLPN*MGSRTWGEVNGRLP
Trigger: GGGTAGTCTACCATTTACTTCACCCCAAGTCCTGCTGCCCATCCAGTTGGGAAGCCATGATTTTCCTAAGAATCCAGGGCCATGGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 90 bp CCCAAAGGAGGAAGCGAGAACTTGGAATTGTATCTCCCATGGCCCTaGATTCTTAGGAAAATCATGGCTTCCCAACTGGATGGGCAGCAG +
Preference number: 1 (lower is better)
Translates to: PKGGSENLELYLPWP*ILRKIMASQLDGQQ
Trigger: CTGCTGCCCATCCAGTTGGGAAGCCATGATTTTCCTAAGAATCCAGGGCCATGGGAGATACAATTCCAAGTTCTCGCTTCCTCCTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR TCA 90 bp AAACTCAGGCTTTCCCCAGTGACCAACAATTTTAATTCCAAGAGGTaGGGATCTCAGGAGGTGGCATTCACCCACCAGGGAGCTAGGGAA +
Preference number: 1 (lower is better)
Translates to: KLRLSPVTNNFNSKR*GSQEVAFTHQGARE
Trigger: TTCCCTAGCTCCCTGGTGGGTGAATGCCACCTCCTGAGATCCTCACCTCTTGGAATTAAAATTGTTGGTCACTGGGGAAAGCCTGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR GCA 90 bp AGTCTTCACCAACTAAGAAAGCTCTGTTATTCTGGCCTGGGTGCTTaGTCCAGACTCAGGAACATCTGGTCAACACAAGCATCACTGGGC +
Preference number: 1 (lower is better)
Translates to: SLHQLRKLCYSGLGA*SRLRNIWSTQASLG
Trigger: GCCCAGTGATGCTTGTGTTGACCAGATGTTCCTGAGTCTGGAGCAAGCACCCAGGCCAGAATAACAGAGCTTTCTTAGTTGGTGAAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR GCA 90 bp TCCCAAAACATCAAGTCTGGGCTCATCCCTTCAAAACCAGTGACATaGTGGCATCAGCTTCTGCTCACACTGCCTCACAAAGAAGGCCAA +
Preference number: 1 (lower is better)
Translates to: SQNIKSGLIPSKPVT*WHQLLLTLPHKEGQ
Trigger: TTGGCCTTCTTTGTGAGGCAGTGTGAGCAGAAGCTGATGCCAGCATGTCACTGGTTTTGAAGGGATGAGCCCAGACTTGATGTTTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 90 bp GACACAGACAGACACAGTCTGGTTGGGACATGCAGTGGCAGCTCCTaGTGTATAACATCTTTCACACACCTTGAGTCTATCTGCTTGCTG +
Preference number: 1 (lower is better)
Translates to: DTDRHSLVGTCSGSS*CITSFTHLESICLL
Trigger: CAGCAAGCAGATAGACTCAAGGTGTGTGAAAGATGTTATACACCAGGAGCTGCCACTGCATGTCCCAACCAGACTGTGTCTGTCTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR TCA 90 bp GACAATCCCAAAACATCAAGTCTGGGCTCATCCCTTCAAAACCAGTaGCATGCTGGCATCAGCTTCTGCTCACACTGCCTCACAAAGAAG +
Preference number: 1 (lower is better)
Translates to: DNPKTSSLGSSLQNQ*HAGISFCSHCLTKK
Trigger: CTTCTTTGTGAGGCAGTGTGAGCAGAAGCTGATGCCAGCATGTCACTGGTTTTGAAGGGATGAGCCCAGACTTGATGTTTTGGGATTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR TCA 90 bp ACAACAGAAACCCTACAACTGGTTGCAAACTCAGGCTTTCCCCAGTaGCCAACAATTTTAATTCCAAGAGGTGAGGATCTCAGGAGGTGG +
Preference number: 1 (lower is better)
Translates to: TTETLQLVANSGFPQ*PTILIPRGEDLRRW
Trigger: CCACCTCCTGAGATCCTCACCTCTTGGAATTAAAATTGTTGGTCACTGGGGAAAGCCTGAGTTTGCAACCAGTTGTAGGGTTTCTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR TCA 90 bp GAAATAAACAAAGCTATAGCTTATAGAAAGCTCAAAACCGCCCTCTaGCATCGCTTTGCGAAAGACCCTTCTTTGCCCAGGGCCTCCTCA +
Preference number: 1 (lower is better)
Translates to: EINKAIAYRKLKTAL*HRFAKDPSLPRASS
Trigger: TGAGGAGGCCCTGGGCAAAGAAGGGTCTTTCGCAAAGCGATGTCAGAGGGCGGTTTTGAGCTTTCTATAAGCTATAGCTTTGTTTATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 90 bp AGGCAGATGTTTAAGTCTTCACCAACTAAGAAAGCTCTGTTATTCTaGCCTGGGTGCTTGCTCCAGACTCAGGAACATCTGGTCAACACA +
Preference number: 1 (lower is better)
Translates to: RQMFKSSPTKKALLF*PGCLLQTQEHLVNT
Trigger: TGTGTTGACCAGATGTTCCTGAGTCTGGAGCAAGCACCCAGGCCAGAATAACAGAGCTTTCTTAGTTGGTGAAGACTTAAACATCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR GCA 90 bp TTTAAGTCTTCACCAACTAAGAAAGCTCTGTTATTCTGGCCTGGGTaGTTGCTCCAGACTCAGGAACATCTGGTCAACACAAGCATCACT +
Preference number: 1 (lower is better)
Translates to: FKSSPTKKALLFWPG*LLQTQEHLVNTSIT
Trigger: AGTGATGCTTGTGTTGACCAGATGTTCCTGAGTCTGGAGCAAGCACCCAGGCCAGAATAACAGAGCTTTCTTAGTTGGTGAAGACTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 90 bp TACTCTAGTGACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTaGGTGCCATCTTGGGGTAGTCCAGATTGTCAATTGTCACATGCA +
Preference number: 1 (lower is better)
Translates to: YSSDMLTLGSQKPNT*VPSWGSPDCQLSHA
Trigger: TGCATGTGACAATTGACAATCTGGACTACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTCACTAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR GCA 90 bp TTCATCTCAGTCTTTCACCTGAGCTTTTGTACAAGGCAGGCAAATTaGCTCCTGACCTCAGGCAGATGTTTAAGTCTTCACCAACTAAGA +
Preference number: 1 (lower is better)
Translates to: FISVFHLSFCTRQAN*LLTSGRCLSLHQLR
Trigger: TCTTAGTTGGTGAAGACTTAAACATCTGCCTGAGGTCAGGAGGCAATTTGCCTGCCTTGTACAAAAGCTCAGGTGAAAGACTGAGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 90 bp ATTATATTATCACGAAGAAGAGGAATACAGGTTCCTCATTCTTTCTaGCATGGCACCAGAAATTCCCAGGTGGAAATGAATGATGTCAAA +
Preference number: 1 (lower is better)
Translates to: IILSRRRGIQVPHSF*HGTRNSQVEMNDVK
Trigger: TTTGACATCATTCATTTCCACCTGGGAATTTCTGGTGCCATGCCAGAAAGAATGAGGAACCTGTATTCCTCTTCTTCGTGATAATATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR TCA 90 bp CAAGACAGAGGTCTGGGGCATGGAAGGGTAGTGTCTCCTGGGGGCCACAGTTTGCACTGGCCCGAGAGCTaGGAGCCTGAGCATGGAGCT +
Preference number: 2 (lower is better)
Translates to: QDRGLGHGRVVSPGGHSLHWPES*EPEHGA
Trigger: AGCTCCATGCTCAGGCTCTCAGCTCTCGGGCCAGTG...CAAACTGTGGCCCCCAGGAGACACTACCCTTCCATGCCCCAGACCTCTGTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 90 bp CCGATGCCGGTACTCTCTTCCCACTCTGCGGTTCTGCCAAGCACCTaGCCTGGGCACTTGTGTGTGTGCAAGACTCTACAGTGTGTTGTC +
Preference number: 2 (lower is better)
Translates to: PMPVLSSHSAVLPST*PGHLCVCKTLQCVV
Trigger: GACAACACACTGTAGAGTCTTGCACACACACAAGTGCCCAGGCAAGGTGCTTGGCAGAACCGCAGAGTGGGAAGAGAGTACCGGCATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 90 bp AGTGCGAATGGCCAGATGCCTCACAGAGAAGACACTGATGTCCACTaGTGGGAGGGAACTTGTGTAGGTTGGTCAGGGGCCCCACCATGC +
Preference number: 2 (lower is better)
Translates to: SANGQMPHREDTDVH*WEGTCVGWSGAPPC
Trigger: GCATGGTGGGGCCCCTGACCAACCTACACAAGTTCCCTCCCACAAGTGGACATCAGTGTCTTCTCTGTGAGGCATCTGGCCATTCGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR TCA 90 bp CAAGACAGAGGTCTGGGGCATGGAAGGGTAGTGTCTCCTGGGGGCCACAGTTTGAGCATGGAGCTTCCTTaGTTGGGAGGCAGAAGAGAT +
Preference number: 2 (lower is better)
Translates to: QDRGLGHGRVVSPGGHSLSMELP*LGGRRD
Trigger: ATCTCTTCTGCCTCCCAATCAAGGAAGCTCCATGCT...CAAACTGTGGCCCCCAGGAGACACTACCCTTCCATGCCCCAGACCTCTGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR GCA 90 bp CAAGACAGAGGTCTGGGGCATGGAAGGGTAGTGTCTCCTGGGGGCCACAGTTTGGGGGAATTGTGTGTGTaGTGCATCATCTCCGACTCT +
Preference number: 2 (lower is better)
Translates to: QDRGLGHGRVVSPGGHSLGELCV*CIISDS
Trigger: AGAGTCGGAGATGATGCAGCACACACACAATTCCCC...CAAACTGTGGCCCCCAGGAGACACTACCCTTCCATGCCCCAGACCTCTGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp AGACTGGCTAAAGGGAAAGGCGGATGCTGGGAGAATCTAAGAAGCCTCTACCCCGGAACTTGTGTAGGTTaGTCAGGGGCCCCACCATGC +
Preference number: 2 (lower is better)
Translates to: RLAKGKGGCWENLRSLYPGTCVG*SGAPPC
Trigger: GCATGGTGGGGCCCCTGACCAACCTACACAAGTTCC...GGGGTAGAGGCTTCTTAGATTCTCCCAGCATCCGCCTTTCCCTTTAGCCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp CAAGACAGAGGTCTGGGGCATGGAAGGGTAGTGTCTCCTGGGGGCCACAGTTTGTACTCCAGGAGCCATTaGGATTCCAATAGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: QDRGLGHGRVVSPGGHSLYSRSH*DSNREE
Trigger: CTCCTCCCTATTGGAATCCCAATGGCTCCTGGAGTA...CAAACTGTGGCCCCCAGGAGACACTACCCTTCCATGCCCCAGACCTCTGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR TCA 90 bp CAAGACAGAGGTCTGGGGCATGGAAGGGTAGTGTCTCCTGGGGGCCACAGTTTGTTTAATTCCAAGAGGTaGGGATCTCAGGAGGTGGCA +
Preference number: 2 (lower is better)
Translates to: QDRGLGHGRVVSPGGHSLFNSKR*GSQEVA
Trigger: TGCCACCTCCTGAGATCCTCACCTCTTGGAATTAAA...CAAACTGTGGCCCCCAGGAGACACTACCCTTCCATGCCCCAGACCTCTGTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR GCA 90 bp TTTGCGAAAGACCCTTCTTTGCCCAGGGCCTCCTCACCAAGGCCTAACAGATGGGCTGGCATCAGCTTCTaGTCACACTGCCTCACAAAG +
Preference number: 2 (lower is better)
Translates to: FAKDPSLPRASSPRPNRWAGISF*SHCLTK
Trigger: CTTTGTGAGGCAGTGTGAGCAGAAGCTGATGCCAGC...CCATCTGTTAGGCCTTGGTGAGGAGGCCCTGGGCAAAGAAGGGTCTTTCGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR GCA 90 bp GGGAGGCAGAAGAGATGCCCAAAGGAGGAAGCGAGAACTTGGAATTGTATCTCCGACCACACCAGGGAGTaGGAATGGCCAGATGCCTCA +
Preference number: 2 (lower is better)
Translates to: GRQKRCPKEEARTWNCISDHTRE*EWPDAS
Trigger: TGAGGCATCTGGCCATTCGCACTCCCTGGTGTGGTC...GGAGATACAATTCCAAGTTCTCGCTTCCTCCTTTGGGCATCTCTTCTGCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR TCA 90 bp GCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTAGTCCAGATTGTCAATTGTTTGTGTGAGAGAGGCTaGCCACACCAGGGAGTGCGA +
Preference number: 2 (lower is better)
Translates to: ARSQTLGCHLGVVQIVNCLCERG*PHQGVR
Trigger: TCGCACTCCCTGGTGTGGTCAGCCTCTCTCACACAA...ACAATTGACAATCTGGACTACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR TCA 90 bp AGACTGGCTAAAGGGAAAGGCGGATGCTGGGAGAATCTAAGAAGCCTCTACCCCAAGTTCCTCCTTGTGTaGGAGAGGCTGACCACACCA +
Preference number: 2 (lower is better)
Translates to: RLAKGKGGCWENLRSLYPKFLLV*ERLTTP
Trigger: TGGTGTGGTCAGCCTCTCTCACACAAGGAGGAACTT...GGGGTAGAGGCTTCTTAGATTCTCCCAGCATCCGCCTTTCCCTTTAGCCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR TCA 90 bp GCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTAGTCCAGATTGTCAATTGTACCATGTTGCCACCATaGGGCAGGTCTGGAACGAGG +
Preference number: 2 (lower is better)
Translates to: ARSQTLGCHLGVVQIVNCTMLPP*GRSGTR
Trigger: CCTCGTTCCAGACCTGCCTCATGGTGGCAACATGGT...ACAATTGACAATCTGGACTACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp AGACTGGCTAAAGGGAAAGGCGGATGCTGGGAGAATCTAAGAAGCCTCTACCCCACCATGAGGCAGGTCTaGAACGAGGGGAGGGTAAAA +
Preference number: 2 (lower is better)
Translates to: RLAKGKGGCWENLRSLYPTMRQV*NEGRVK
Trigger: TTTTACCCTCCCCTCGTTCCAGACCTGCCTCATGGT...GGGGTAGAGGCTTCTTAGATTCTCCCAGCATCCGCCTTTCCCTTTAGCCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR TCA 90 bp GGGAGGCAGAAGAGATGCCCAAAGGAGGAAGCGAGAACTTGGAATTGTATCTCCCTCAAAACCGCCCTCTaGCATCGCTTTGCGAAAGAC +
Preference number: 2 (lower is better)
Translates to: GRQKRCPKEEARTWNCISLKTAL*HRFAKD
Trigger: GTCTTTCGCAAAGCGATGTCAGAGGGCGGTTTTGAG...GGAGATACAATTCCAAGTTCTCGCTTCCTCCTTTGGGCATCTCTTCTGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR GCA 90 bp TTTGCGAAAGACCCTTCTTTGCCCAGGGCCTCCTCACCAAGGCCTAACAGATGGAACCCTACAACTGGTTaGAAACTCAGGCTTTCCCCA +
Preference number: 2 (lower is better)
Translates to: FAKDPSLPRASSPRPNRWNPTTG*KLRLSP
Trigger: TGGGGAAAGCCTGAGTTTGCAACCAGTTGTAGGGTT...CCATCTGTTAGGCCTTGGTGAGGAGGCCCTGGGCAAAGAAGGGTCTTTCGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR GCA 90 bp GACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTCGAAAGACCCTTCTTTaGCCAGGGCCTCCTCACCAA +
Preference number: 2 (lower is better)
Translates to: DMLTLGSQKPNTWVPSWGRKTLL*PGPPHQ
Trigger: TTGGTGAGGAGGCCCTGGGCAAAGAAGGGTCTTTCG...ACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp GGGAGGCAGAAGAGATGCCCAAAGGAGGAAGCGAGAACTTGGAATTGTATCTCCCAAGCATCACTGGGCTaGGGAATTGTGTGTGTGCTG +
Preference number: 2 (lower is better)
Translates to: GRQKRCPKEEARTWNCISQASLG*GIVCVL
Trigger: CAGCACACACACAATTCCCCAGCCCAGTGATGCTTG...GGAGATACAATTCCAAGTTCTCGCTTCCTCCTTTGGGCATCTCTTCTGCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 90 bp GACTCAGGAACATCTGGTCAACACAAGCATCACTGGGCTGGGGAATaGTGTGTGTGCTGCATCATCTCCGACTCTCTTGTAGTTCCTTCC +
Preference number: 2 (lower is better)
Translates to: DSGTSGQHKHHWAGE*CVCCIISDSLVVPS
Trigger: GGAAGGAACTACAAGAGAGTCGGAGATGATGCAGCACACACACAATTCCCCAGCCCAGTGATGCTTGTGTTGACCAGATGTTCCTGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 90 bp AAGCCAAACACTTGGGTGCCATCTTGGGGTAGTCCAGATTGTCAATaGTCACATGCAAGACAGAGGTCTGGGGCATGGAAGGGTAGTGTC +
Preference number: 2 (lower is better)
Translates to: KPNTWVPSWGSPDCQ*SHARQRSGAWKGSV
Trigger: GACACTACCCTTCCATGCCCCAGACCTCTGTCTTGCATGTGACAATTGACAATCTGGACTACCCCAAGATGGCACCCAAGTGTTTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR GCA 90 bp AGACTGGCTAAAGGGAAAGGCGGATGCTGGGAGAATCTAAGAAGCCTCTACCCCGGGCACTTGTGTGTGTaGAAGACTCTACAGTGTGTT +
Preference number: 2 (lower is better)
Translates to: RLAKGKGGCWENLRSLYPGHLCV*KTLQCV
Trigger: AACACACTGTAGAGTCTTGCACACACACAAGTGCCC...GGGGTAGAGGCTTCTTAGATTCTCCCAGCATCCGCCTTTCCCTTTAGCCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp CAAGACAGAGGTCTGGGGCATGGAAGGGTAGTGTCTCCTGGGGGCCACAGTTTGAAGAAGCAAGAGGGGTaGGAATTACAATCCTCAAAT +
Preference number: 2 (lower is better)
Translates to: QDRGLGHGRVVSPGGHSLKKQEG*ELQSSN
Trigger: ATTTGAGGATTGTAATTCCCACCCCTCTTGCTTCTT...CAAACTGTGGCCCCCAGGAGACACTACCCTTCCATGCCCCAGACCTCTGTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp GGGAGGCAGAAGAGATGCCCAAAGGAGGAAGCGAGAACTTGGAATTGTATCTCCAAAGCTCTGTTATTCTaGCCTGGGTGCTTGCTCCAG +
Preference number: 2 (lower is better)
Translates to: GRQKRCPKEEARTWNCISKALLF*PGCLLQ
Trigger: CTGGAGCAAGCACCCAGGCCAGAATAACAGAGCTTT...GGAGATACAATTCCAAGTTCTCGCTTCCTCCTTTGGGCATCTCTTCTGCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp TTTGCGAAAGACCCTTCTTTGCCCAGGGCCTCCTCACCAAGGCCTAACAGATGGCCAAAACATCAAGTCTaGGCTCATCCCTTCAAAACC +
Preference number: 2 (lower is better)
Translates to: FAKDPSLPRASSPRPNRWPKHQV*AHPFKT
Trigger: GGTTTTGAAGGGATGAGCCCAGACTTGATGTTTTGG...CCATCTGTTAGGCCTTGGTGAGGAGGCCCTGGGCAAAGAAGGGTCTTTCGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp AGACTGGCTAAAGGGAAAGGCGGATGCTGGGAGAATCTAAGAAGCCTCTACCCCACTGATGTCCACTTGTaGGAGGGAACTTGTGTAGGT +
Preference number: 2 (lower is better)
Translates to: RLAKGKGGCWENLRSLYPTDVHL*EGTCVG
Trigger: ACCTACACAAGTTCCCTCCCACAAGTGGACATCAGT...GGGGTAGAGGCTTCTTAGATTCTCCCAGCATCCGCCTTTCCCTTTAGCCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 90 bp TGGGAGGCAGAAGAGATGCCCAAAGGAGGAAGCGAGAACTTGGAATaGTATCTCCCATGGCCCTGGATTCTTAGGAAAATCATGGCTTCC +
Preference number: 2 (lower is better)
Translates to: WEAEEMPKGGSENLE*YLPWPWILRKIMAS
Trigger: GGAAGCCATGATTTTCCTAAGAATCCAGGGCCATGGGAGATACAATTCCAAGTTCTCGCTTCCTCCTTTGGGCATCTCTTCTGCCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR GCA 90 bp GGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTTGTACAAGGCAGAGTCTGGTTGGGACATaGAGTGGCAGCTCCTGGTGT +
Preference number: 2 (lower is better)
Translates to: GRGKTFISVFHLSFCTRQSLVGT*SGSSWC
Trigger: ACACCAGGAGCTGCCACTGCATGTCCCAACCAGACT...CTGCCTTGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR GCA 90 bp GACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTAGCTTCTGCTCACACTaGCTCACAAAGAAGGCCAAG +
Preference number: 2 (lower is better)
Translates to: DMLTLGSQKPNTWVPSWGSFCSH*LTKKAK
Trigger: CTTGGCCTTCTTTGTGAGGCAGTGTGAGCAGAAGCT...ACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp AGACTGGCTAAAGGGAAAGGCGGATGCTGGGAGAATCTAAGAAGCCTCTACCCCTCATTCTTTCTGGCATaGCACCAGAAATTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: RLAKGKGGCWENLRSLYPSFFLA*HQKFPG
Trigger: ACCTGGGAATTTCTGGTGCCATGCCAGAAAGAATGA...GGGGTAGAGGCTTCTTAGATTCTCCCAGCATCCGCCTTTCCCTTTAGCCAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp CACAACAGAAACCCTACAACTGGTTGCAAACTCAGGCTTTCCCCAGTGACCAACTCTGTTATTCTGGCCTaGGTGCTTGCTCCAGACTCA +
Preference number: 2 (lower is better)
Translates to: HNRNPTTGCKLRLSPVTNSVILA*VLAPDS
Trigger: TGAGTCTGGAGCAAGCACCCAGGCCAGAATAACAGA...GTTGGTCACTGGGGAAAGCCTGAGTTTGCAACCAGTTGTAGGGTTTCTGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp GCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTAGTCCAGATTGTCAATTGTTCTCCCCCTGCCAAATaGCATGACCACAATGGGAAA +
Preference number: 2 (lower is better)
Translates to: ARSQTLGCHLGVVQIVNCSPPAK*HDHNGK
Trigger: TTTCCCATTGTGGTCATGCCATTTGGCAGGGGGAGA...ACAATTGACAATCTGGACTACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 90 bp GGCAGGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTaGTACAAGGCAGGCAAATTGCCTCCTGACCTCAGGCAGATGTTT +
Preference number: 2 (lower is better)
Translates to: GRERKDIHLSLSPEL*YKAGKLPPDLRQMF
Trigger: AAACATCTGCCTGAGGTCAGGAGGCAATTTGCCTGCCTTGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp CTTCTAGACAGGGTTCGAGATCTCTTGTTGGTTTCTCTCCATCACTTCTGGGTTCAGACAGACACAGTCTaGTTGGGACATGCAGTGGCA +
Preference number: 2 (lower is better)
Translates to: LLDRVRDLLLVSLHHFWVQTDTV*LGHAVA
Trigger: TGCCACTGCATGTCCCAACCAGACTGTGTCTGTCTG...AACCCAGAAGTGATGGAGAGAAACCAACAAGAGATCTCGAACCCTGTCTAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp CAAGACAGAGGTCTGGGGCATGGAAGGGTAGTGTCTCCTGGGGGCCACAGTTTGTCTGTGGATAGTGTATaGTGTGTGTATTTATCCAAT +
Preference number: 2 (lower is better)
Translates to: QDRGLGHGRVVSPGGHSLSVDSV*CVYLSN
Trigger: ATTGGATAAATACACACACCATACACTATCCACAGA...CAAACTGTGGCCCCCAGGAGACACTACCCTTCCATGCCCCAGACCTCTGTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp GGGAGGCAGAAGAGATGCCCAAAGGAGGAAGCGAGAACTTGGAATTGTATCTCCCAGAAACCCTACAACTaGTTGCAAACTCAGGCTTTC +
Preference number: 2 (lower is better)
Translates to: GRQKRCPKEEARTWNCISQKPYN*LQTQAF
Trigger: GAAAGCCTGAGTTTGCAACCAGTTGTAGGGTTTCTG...GGAGATACAATTCCAAGTTCTCGCTTCCTCCTTTGGGCATCTCTTCTGCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp GACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTGAGGAAGCGAGAACTTaGAATTGTATCTCCCATGGC +
Preference number: 2 (lower is better)
Translates to: DMLTLGSQKPNTWVPSWGEEART*NCISHG
Trigger: GCCATGGGAGATACAATTCCAAGTTCTCGCTTCCTC...ACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp GACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTAGACTCAGGAACATCTaGTCAACACAAGCATCACTG +
Preference number: 2 (lower is better)
Translates to: DMLTLGSQKPNTWVPSWGRLRNI*STQASL
Trigger: CAGTGATGCTTGTGTTGACCAGATGTTCCTGAGTCT...ACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp GAGGTTAAAATAAGGACAATCCCAAAACATCAAGTCTGGGCTCATCCCTTCAAAGAGGATCTCAGGAGGTaGCATTCACCCACCAGGGAG +
Preference number: 2 (lower is better)
Translates to: EVKIRTIPKHQVWAHPFKEDLRR*HSPTRE
Trigger: CTCCCTGGTGGGTGAATGCCACCTCCTGAGATCCTC...TTTGAAGGGATGAGCCCAGACTTGATGTTTTGGGATTGTCCTTATTTTAACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 90 bp CTGCCTTTGACTGATCCTGAAATGGTTGGCCTTTCAGCAAGTTCCTaGTCTGTGTCCTTTATGTATTGGAGGAGAAGGGCAAAGGGAAGA +
Preference number: 2 (lower is better)
Translates to: LPLTDPEMVGLSASS*SVSFMYWRRRAKGR
Trigger: TCTTCCCTTTGCCCTTCTCCTCCAATACATAAAGGACACAGACAAGGAACTTGCTGAAAGGCCAACCATTTCAGGATCAGTCAAAGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR TCA 90 bp GAGGCAGGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTTGTACAATCTTTCACACACCTTaGGTCTATCTGCTTGCTGCC +
Preference number: 2 (lower is better)
Translates to: EAGRGKTFISVFHLSFCTIFHTP*VYLLAA
Trigger: GGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGAT...TGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCCTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR TCA 90 bp AATCATGTTCAATGTCACCATCCTGCCAACCCCCACTCTGTAAAATATACATTACTGTGCCCAGGCCCTTaGCTACACTCTCATCTGCCA +
Preference number: 2 (lower is better)
Translates to: NHVQCHHPANPHSVKYTLLCPGP*LHSHLP
Trigger: TGGCAGATGAGAGTGTAGTCAAGGGCCTGGGCACAG...TAATGTATATTTTACAGAGTGGGGGTTGGCAGGATGGTGACATTGAACATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR TCA 90 bp AGTGACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGTTCCACTGCAGAATTTaGTTCAGGAAAATGGCGGCA +
Preference number: 2 (lower is better)
Translates to: SDMLTLGSQKPNTWVPSWFHCRI*FRKMAA
Trigger: TGCCGCCATTTTCCTGAATCAAATTCTGCAGTGGAA...CCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR GCA 90 bp TATTTTCCTCTCCATTCCACTGCAGAATTTGATTCAGGAAAATGGCGGCATGTGTCAGGGGCCCCACCATaGGAGACCTTGAGGTTAAAA +
Preference number: 2 (lower is better)
Translates to: YFPLHSTAEFDSGKWRHVSGAPP*ETLRLK
Trigger: TTTTAACCTCAAGGTCTCGCATGGTGGGGCCCCTGA...CACATGCCGCCATTTTCCTGAATCAAATTCTGCAGTGGAATGGAGAGGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR GCA 90 bp GGGAGGCAGAAGAGATGCCCAAAGGAGGAAGCGAGAACTTGGAATTGTATCTCCATTCACCAGTCTAGCTaGTTGCCTAGAAGTATTTTC +
Preference number: 2 (lower is better)
Translates to: GRQKRCPKEEARTWNCISIHQSS*LPRSIF
Trigger: GAAAATACTTCTAGGCAAGCAGCTAGACTGGTGAAT...GGAGATACAATTCCAAGTTCTCGCTTCCTCCTTTGGGCATCTCTTCTGCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp GAGGTTAAAATAAGGACAATCCCAAAACATCAAGTCTGGGCTCATCCCTTCAAACAGACACAGTCTGGTTaGGACATGCAGTGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: EVKIRTIPKHQVWAHPFKQTQSG*DMQWQL
Trigger: GAGCTGCCACTGCATGTCCCAACCAGACTGTGTCTG...TTTGAAGGGATGAGCCCAGACTTGATGTTTTGGGATTGTCCTTATTTTAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 90 bp AGCTCCTGGTGTATAACATCTTTCACACACCTTGAGTCTATCTGCTaGCTGCCTTTGACTGATCCTGAAATGGTTGGCCTTTCAGCAAGT +
Preference number: 2 (lower is better)
Translates to: SSWCITSFTHLESIC*LPLTDPEMVGLSAS
Trigger: ACTTGCTGAAAGGCCAACCATTTCAGGATCAGTCAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGATGTTATACACCAGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 90 bp TTAGCAACAAATACATTCCTTCTAGACAGGGTTCGAGATCTCTTGTaGGTTTCTCTCCATCACTTCTGGGTTTCAGGACAGCAGACTGGC +
Preference number: 2 (lower is better)
Translates to: LATNTFLLDRVRDLL*VSLHHFWVSGQQTG
Trigger: GCCAGTCTGCTGTCCTGAAACCCAGAAGTGATGGAGAGAAACCAACAAGAGATCTCGAACCCTGTCTAGAAGGAATGTATTTGTTGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR TCA 90 bp AGCGAGAACTTGGAATTGTATCTCCCATGGCCCTGGATTCTTAGGAAAATCATGTCTGCTTGCTGCCTTTaGCTGATCCTGAAATGGTTG +
Preference number: 2 (lower is better)
Translates to: SENLELYLPWPWILRKIMSACCL*LILKWL
Trigger: CAACCATTTCAGGATCAGTCAAAGGCAGCAAGCAGA...CATGATTTTCCTAAGAATCCAGGGCCATGGGAGATACAATTCCAAGTTCTCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR GCA 90 bp GACCTTGAGGTTAAAATAAGGACAATCCCAAAACATCAAGTCTGGGCTCATCCCTCAATGTCACCATCCTaGCAACCCCCACTCTGTAAA +
Preference number: 2 (lower is better)
Translates to: DLEVKIRTIPKHQVWAHPSMSPS*QPPLCK
Trigger: TTTACAGAGTGGGGGTTGGCAGGATGGTGACATTGA...GGGATGAGCCCAGACTTGATGTTTTGGGATTGTCCTTATTTTAACCTCAAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR GCA 90 bp AGTGACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGACCAGTCTAGCTGCTTaGCTAGAAGTATTTTCCTCT +
Preference number: 2 (lower is better)
Translates to: SDMLTLGSQKPNTWVPSWTSLAA*LEVFSS
Trigger: AGAGGAAAATACTTCTAGGCAAGCAGCTAGACTGGT...CCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp GACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTTTCATTGTCATCATCTaGGAAGAGTTAGTGTCCAAG +
Preference number: 2 (lower is better)
Translates to: DMLTLGSQKPNTWVPSWGFIVII*EELVSK
Trigger: CTTGGACACTAACTCTTCCCAGATGATGACAATGAA...ACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp GGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTTGTACAAGGCAGGTTCCTCATTCTTTCTaGCATGGCACCAGAAATTCC +
Preference number: 2 (lower is better)
Translates to: GRGKTFISVFHLSFCTRQVPHSF*HGTRNS
Trigger: GGAATTTCTGGTGCCATGCCAGAAAGAATGAGGAAC...CTGCCTTGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp GAGGCAGGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTTGTACATGCAGTGGCAGCTCCTaGTGTATAACATCTTTCACA +
Preference number: 2 (lower is better)
Translates to: EAGRGKTFISVFHLSFCTCSGSS*CITSFT
Trigger: TGTGAAAGATGTTATACACCAGGAGCTGCCACTGCA...TGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCCTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp CACAACAGAAACCCTACAACTGGTTGCAAACTCAGGCTTTCCCCAGTGACCAACCTACCCAAATCTACTTaGCTATATCTGTGGATAGTG +
Preference number: 2 (lower is better)
Translates to: HNRNPTTGCKLRLSPVTNLPKST*LYLWIV
Trigger: CACTATCCACAGATATAGCCAAGTAGATTTGGGTAG...GTTGGTCACTGGGGAAAGCCTGAGTTTGCAACCAGTTGTAGGGTTTCTGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 90 bp ATTCATCTCAGTCTTTCACCTGAGCTTTTGTACAAGGCAGGCAAATaGCCTCCTGACCTCAGGCAGATGTTTAAGTCTTCACCAACTAAG +
Preference number: 2 (lower is better)
Translates to: IHLSLSPELLYKAGK*PPDLRQMFKSSPTK
Trigger: CTTAGTTGGTGAAGACTTAAACATCTGCCTGAGGTCAGGAGGCAATTTGCCTGCCTTGTACAAAAGCTCAGGTGAAAGACTGAGATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp TATTTTCCTCTCCATTCCACTGCAGAATTTGATTCAGGAAAATGGCGGCATGTGAAACCAGTGACATGCTaGCATCAGCTTCTGCTCACA +
Preference number: 2 (lower is better)
Translates to: YFPLHSTAEFDSGKWRHVKPVTC*HQLLLT
Trigger: TGTGAGCAGAAGCTGATGCCAGCATGTCACTGGTTT...CACATGCCGCCATTTTCCTGAATCAAATTCTGCAGTGGAATGGAGAGGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 90 bp TGTATAACATCTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTaGACTGATCCTGAAATGGTTGGCCTTTCAGCAAGTTCCTTGTCT +
Preference number: 2 (lower is better)
Translates to: CITSFTHLESICLLP*TDPEMVGLSASSLS
Trigger: AGACAAGGAACTTGCTGAAAGGCCAACCATTTCAGGATCAGTCAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGATGTTATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR TCA 90 bp GAGGTTAAAATAAGGACAATCCCAAAACATCAAGTCTGGGCTCATCCCTTCAAATCTCAGTCTTTCACCTaGGCTTTTGTACAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: EVKIRTIPKHQVWAHPFKSQSFT*AFVQGR
Trigger: CCTGCCTTGTACAAAAGCTCAGGTGAAAGACTGAGA...TTTGAAGGGATGAGCCCAGACTTGATGTTTTGGGATTGTCCTTATTTTAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR TCA 90 bp GACCTTGAGGTTAAAATAAGGACAATCCCAAAACATCAAGTCTGGGCTCATCCCTCAGGCTTTCCCCAGTaGCCAACAATTTTAATTCCA +
Preference number: 2 (lower is better)
Translates to: DLEVKIRTIPKHQVWAHPSGFPQ*PTILIP
Trigger: TGGAATTAAAATTGTTGGTCACTGGGGAAAGCCTGA...GGGATGAGCCCAGACTTGATGTTTTGGGATTGTCCTTATTTTAACCTCAAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR GCA 90 bp TATTTTCCTCTCCATTCCACTGCAGAATTTGATTCAGGAAAATGGCGGCATGTGCACCTTGAGTCTATCTaGTTGCTGCCTTTGACTGAT +
Preference number: 2 (lower is better)
Translates to: YFPLHSTAEFDSGKWRHVHLESI*LLPLTD
Trigger: ATCAGTCAAAGGCAGCAAGCAGATAGACTCAAGGTG...CACATGCCGCCATTTTCCTGAATCAAATTCTGCAGTGGAATGGAGAGGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 90 bp AATTTAGCAACAAATACATTCCTTCTAGACAGGGTTCGAGATCTCTaGTTGGTTTCTCTCCATCACTTCTGGGTTTCAGGACAGCAGACT +
Preference number: 2 (lower is better)
Translates to: NLATNTFLLDRVRDL*LVSLHHFWVSGQQT
Trigger: AGTCTGCTGTCCTGAAACCCAGAAGTGATGGAGAGAAACCAACAAGAGATCTCGAACCCTGTCTAGAAGGAATGTATTTGTTGCTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR TCA 90 bp CTTCTAGACAGGGTTCGAGATCTCTTGTTGGTTTCTCTCCATCACTTCTGGGTTCCAGGTGGAAATGAATaGTGTCAAAACCAAAAAGAA +
Preference number: 2 (lower is better)
Translates to: LLDRVRDLLLVSLHHFWVPGGNE*CQNQKE
Trigger: TTCTTTTTGGTTTTGACATCATTCATTTCCACCTGG...AACCCAGAAGTGATGGAGAGAAACCAACAAGAGATCTCGAACCCTGTCTAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp GACCTTGAGGTTAAAATAAGGACAATCCCAAAACATCAAGTCTGGGCTCATCCCACTTGGCTATATCTGTaGATAGTGTATGGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: DLEVKIRTIPKHQVWAHPTWLYL*IVYGVC
Trigger: ACACACACCATACACTATCCACAGATATAGCCAAGT...GGGATGAGCCCAGACTTGATGTTTTGGGATTGTCCTTATTTTAACCTCAAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR GCA 90 bp AATCATGTTCAATGTCACCATCCTGCCAACCCCCACTCTGTAAAATATACATTAGAATTGTGTGTGTGCTaGATCATCTCCGACTCTCTT +
Preference number: 2 (lower is better)
Translates to: NHVQCHHPANPHSVKYTLELCVC*IISDSL
Trigger: AAGAGAGTCGGAGATGATGCAGCACACACACAATTC...TAATGTATATTTTACAGAGTGGGGGTTGGCAGGATGGTGACATTGAACATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR TCA 90 bp AATCATGTTCAATGTCACCATCCTGCCAACCCCCACTCTGTAAAATATACATTACCAATAAACCCCATATaGCAGCATAGACCTTTCTTT +
Preference number: 2 (lower is better)
Translates to: NHVQCHHPANPHSVKYTLPINPI*QHRPFF
Trigger: AAAGAAAGGTCTATGCTGTCATATGGGGTTTATTGG...TAATGTATATTTTACAGAGTGGGGGTTGGCAGGATGGTGACATTGAACATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CCA 90 bp GAGGTTAAAATAAGGACAATCCCAAAACATCAAGTCTGGGCTCATCCCTTCAAACTCTGTTTCCTAAAGTaGAATGAACTGAAGATACAA +
Preference number: 2 (lower is better)
Translates to: EVKIRTIPKHQVWAHPFKLCFLK*NELKIQ
Trigger: TTGTATCTTCAGTTCATTCCACTTTAGGAAACAGAG...TTTGAAGGGATGAGCCCAGACTTGATGTTTTGGGATTGTCCTTATTTTAACCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR TCA 72 bp CCTACCCTGGACAGAGCAGAGCACTGGCCCGAGAGCTaGGAGCCTGAGCATGGAGCTTCCTTGATTGGGAGG +
Preference number: 3 (lower is better)
Translates to: PTLDRAEHWPES*EPEHGASLIGR
Trigger: CCTCCCAATCAAGGAAGCTCCATGCTCAGGCTCTCAGCTCTCGGGCCAGTGCTCTGCTCTGTCCAGGGTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR TCA 72 bp GGACAGAGCAGAGCACTGGCCCGAGAGCTGAGAGCCTaGGCATGGAGCTTCCTTGATTGGGAGGCAGAAGAG +
Preference number: 3 (lower is better)
Translates to: GQSRALARELRA*AWSFLDWEAEE
Trigger: CTCTTCTGCCTCCCAATCAAGGAAGCTCCATGCTCAGGCTCTCAGCTCTCGGGCCAGTGCTCTGCTCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR GCA 72 bp ACCCGATGCCGGTACTCTCTTCCCACTCTGCGGTTCTaGCAAGCACCTTGCCTGGGCACTTGTGTGTGTGCA +
Preference number: 3 (lower is better)
Translates to: TRCRYSLPTLRF*QAPCLGTCVCA
Trigger: TGCACACACACAAGTGCCCAGGCAAGGTGCTTGGCAGAACCGCAGAGTGGGAAGAGAGTACCGGCATCGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR GCA 72 bp CCAAGGAAACCCGATGCCGGTACTCTCTTCCCACTCTaGGGTTCTGCCAAGCACCTTGCCTGGGCACTTGTG +
Preference number: 3 (lower is better)
Translates to: PRKPDAGTLFPL*GSAKHLAWALV
Trigger: CACAAGTGCCCAGGCAAGGTGCTTGGCAGAACCGCAGAGTGGGAAGAGAGTACCGGCATCGGGTTTCCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR GCA 72 bp CCGCCCTCTGACATCGCTTTGCGAAAGACCCTTCTTTaGCCAGGGCCTCCTCACCAAGGCCTAACAGATGGG +
Preference number: 3 (lower is better)
Translates to: PPSDIALRKTLL*PGPPHQGLTDG
Trigger: CCCATCTGTTAGGCCTTGGTGAGGAGGCCCTGGGCAAAGAAGGGTCTTTCGCAAAGCGATGTCAGAGGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CAA 90 bp CAAGACAGAGGTCTGGGGCATGGAAGGGTAGTGTCTCCTGGGGGCCACAGTTTGGTTCTGCCAAGCACCTaGCCTGGGCACTTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: QDRGLGHGRVVSPGGHSLVLPST*PGHLCV
Trigger: CACACACAAGTGCCCAGGCAAGGTGCTTGGCAGAAC...CAAACTGTGGCCCCCAGGAGACACTACCCTTCCATGCCCCAGACCTCTGTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR TCA 72 bp AGCCTTCACCCAAGTTCCTCCTTGTGTGAGAGAGGCTaGCCACACCAGGGAGTGCGAATGGCCAGATGCCTC +
Preference number: 3 (lower is better)
Translates to: SLHPSSSLCERG*PHQGVRMARCL
Trigger: GAGGCATCTGGCCATTCGCACTCCCTGGTGTGGTCAGCCTCTCTCACACAAGGAGGAACTTGGGTGAAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR TCA 72 bp CCTCACACTCAGCCTTCACCCAAGTTCCTCCTTGTGTaGGAGAGGCTGACCACACCAGGGAGTGCGAATGGC +
Preference number: 3 (lower is better)
Translates to: PHTQPSPKFLLV*ERLTTPGSANG
Trigger: GCCATTCGCACTCCCTGGTGTGGTCAGCCTCTCTCACACAAGGAGGAACTTGGGTGAAGGCTGAGTGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 72 bp AGACAGAGGTCTGGGGCATGGAAGGGTAGTGTCTCCTaGGGGCCACAGTTTGCCCTAGACAGGGCTATTCCA +
Preference number: 3 (lower is better)
Translates to: RQRSGAWKGSVS*GPQFALDRAIP
Trigger: TGGAATAGCCCTGTCTAGGGCAAACTGTGGCCCCCAGGAGACACTACCCTTCCATGCCCCAGACCTCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR TCA 72 bp GTGCCCAGGCCCTTGACTACACTCTCATCTGCCATCTaGGCTAAGCCAGGAAGGCAGTTAAAGAAAGGCCCC +
Preference number: 3 (lower is better)
Translates to: VPRPLTTLSSAI*AKPGRQLKKGP
Trigger: GGGGCCTTTCTTTAACTGCCTTCCTGGCTTAGCTCAGATGGCAGATGAGAGTGTAGTCAAGGGCCTGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 72 bp TCTGGCCTGGGTGCTTGCTCCAGACTCAGGAACATCTaGTCAACACAAGCATCACTGGGCTGGGGAATTGTG +
Preference number: 3 (lower is better)
Translates to: SGLGACSRLRNI*STQASLGWGIV
Trigger: CACAATTCCCCAGCCCAGTGATGCTTGTGTTGACCAGATGTTCCTGAGTCTGGAGCAAGCACCCAGGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 72 bp CTCTTCCCACTCTGCGGTTCTGCCAAGCACCTTGCCTaGGCACTTGTGTGTGTGCAAGACTCTACAGTGTGT +
Preference number: 3 (lower is better)
Translates to: LFPLCGSAKHLA*ALVCVQDSTVC
Trigger: ACACACTGTAGAGTCTTGCACACACACAAGTGCCCAGGCAAGGTGCTTGGCAGAACCGCAGAGTGGGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 72 bp ACTGATGTCCACTTGTGGGAGGGAACTTGTGTAGGTTaGTCAGGGGCCCCACCATGCGAGACCTTGAGGTTA +
Preference number: 3 (lower is better)
Translates to: TDVHLWEGTCVG*SGAPPCETLRL
Trigger: TAACCTCAAGGTCTCGCATGGTGGGGCCCCTGACCAACCTACACAAGTTCCCTCCCACAAGTGGACATCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 72 bp TGTCAATTGTCACATGCAAGACAGAGGTCTGGGGCATaGAAGGGTAGTGTCTCCTGGGGGCCACAGTTTGCC +
Preference number: 3 (lower is better)
Translates to: CQLSHARQRSGA*KGSVSWGPQFA
Trigger: GGCAAACTGTGGCCCCCAGGAGACACTACCCTTCCATGCCCCAGACCTCTGTCTTGCATGTGACAATTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 72 bp TCTTTGCCCAGGGCCTCCTCACCAAGGCCTAACAGATaGGGATGTGGTTCTGCTAATTTATCGACTCCGCAG +
Preference number: 3 (lower is better)
Translates to: SLPRASSPRPNR*GCGSANLSTPQ
Trigger: CTGCGGAGTCGATAAATTAGCAGAACCACATCCCCATCTGTTAGGCCTTGGTGAGGAGGCCCTGGGCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 72 bp AAATCATGGCTTCCCAACTGGATGGGCAGCAGGACTTaGGGTGAAGTAAATGGTAGACTACCCAGGGCCGAG +
Preference number: 3 (lower is better)
Translates to: KSWLPNWMGSRT*GEVNGRLPRAE
Trigger: CTCGGCCCTGGGTAGTCTACCATTTACTTCACCCCAAGTCCTGCTGCCCATCCAGTTGGGAAGCCATGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR GCA 72 bp TTTCAGGACAGCAGACTGGCTAAAGGGAAAGGCGGATaGTGGGAGAATCTAAGAAGCCTCTACCCCCAAAGC +
Preference number: 3 (lower is better)
Translates to: FQDSRLAKGKGG*WENLRSLYPQS
Trigger: GCTTTGGGGGTAGAGGCTTCTTAGATTCTCCCAGCATCCGCCTTTCCCTTTAGCCAGTCTGCTGTCCTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 72 bp CCAGACTCAGGAACATCTGGTCAACACAAGCATCACTaGGCTGGGGAATTGTGTGTGTGCTGCATCATCTCC +
Preference number: 3 (lower is better)
Translates to: PDSGTSGQHKHH*AGELCVCCIIS
Trigger: GGAGATGATGCAGCACACACACAATTCCCCAGCCCAGTGATGCTTGTGTTGACCAGATGTTCCTGAGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 72 bp TTGTTCAAGAACCATGTTGCCACCATGAGGCAGGTCTaGAACGAGGGGAGGGTAAAAGACAGGAGTCTCCCA +
Preference number: 3 (lower is better)
Translates to: LFKNHVATMRQV*NEGRVKDRSLP
Trigger: TGGGAGACTCCTGTCTTTTACCCTCCCCTCGTTCCAGACCTGCCTCATGGTGGCAACATGGTTCTTGAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CAA 90 bp CTTCTAGACAGGGTTCGAGATCTCTTGTTGGTTTCTCTCCATCACTTCTGGGTTCCTGTGCCCAGGCCCTaGACTACACTCTCATCTGCC +
Preference number: 3 (lower is better)
Translates to: LLDRVRDLLLVSLHHFWVPVPRP*TTLSSA
Trigger: GGCAGATGAGAGTGTAGTCAAGGGCCTGGGCACAGG...AACCCAGAAGTGATGGAGAGAAACCAACAAGAGATCTCGAACCCTGTCTAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CAA 90 bp CTTCTAGACAGGGTTCGAGATCTCTTGTTGGTTTCTCTCCATCACTTCTGGGTTGCGAAAGACCCTTCTTaGCCCAGGGCCTCCTCACCA +
Preference number: 3 (lower is better)
Translates to: LLDRVRDLLLVSLHHFWVAKDPS*PRASSP
Trigger: TGGTGAGGAGGCCCTGGGCAAAGAAGGGTCTTTCGC...AACCCAGAAGTGATGGAGAGAAACCAACAAGAGATCTCGAACCCTGTCTAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CAA 90 bp AGTGACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGTACAAGGCAGGCAAATaGCCTCCTGACCTCAGGCAG +
Preference number: 3 (lower is better)
Translates to: SDMLTLGSQKPNTWVPSWYKAGK*PPDLRQ
Trigger: CTGCCTGAGGTCAGGAGGCAATTTGCCTGCCTTGTA...CCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CAA 90 bp AGACTGGCTAAAGGGAAAGGCGGATGCTGGGAGAATCTAAGAAGCCTCTACCCCCACCAGTCTAGCTGCTaGCCTAGAAGTATTTTCCTC +
Preference number: 3 (lower is better)
Translates to: RLAKGKGGCWENLRSLYPHQSSC*PRSIFL
Trigger: GAGGAAAATACTTCTAGGCAAGCAGCTAGACTGGTG...GGGGTAGAGGCTTCTTAGATTCTCCCAGCATCCGCCTTTCCCTTTAGCCAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR GCA 72 bp CACAAGCATCACTGGGCTGGGGAATTGTGTGTGTGCTaGATCATCTCCGACTCTCTTGTAGTTCCTTCCTTC +
Preference number: 3 (lower is better)
Translates to: HKHHWAGELCVC*IISDSLVVPSF
Trigger: GAAGGAAGGAACTACAAGAGAGTCGGAGATGATGCAGCACACACACAATTCCCCAGCCCAGTGATGCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR GCA 72 bp CAACACAAGCATCACTGGGCTGGGGAATTGTGTGTGTaGTGCATCATCTCCGACTCTCTTGTAGTTCCTTCC +
Preference number: 3 (lower is better)
Translates to: QHKHHWAGELCV*CIISDSLVVPS
Trigger: GGAAGGAACTACAAGAGAGTCGGAGATGATGCAGCACACACACAATTCCCCAGCCCAGTGATGCTTGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR GCA 72 bp GTACACGGTAATGAAATTGATCCCAAGGAAACCCGATaGCGGTACTCTCTTCCCACTCTGCGGTTCTGCCAA +
Preference number: 3 (lower is better)
Translates to: VHGNEIDPKETR*RYSLPTLRFCQ
Trigger: TTGGCAGAACCGCAGAGTGGGAAGAGAGTACCGGCATCGGGTTTCCTTGGGATCAATTTCATTACCGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 72 bp GGCCCTGGATTCTTAGGAAAATCATGGCTTCCCAACTaGATGGGCAGCAGGACTTGGGGTGAAGTAAATGGT +
Preference number: 3 (lower is better)
Translates to: GPGFLGKSWLPN*MGSRTWGEVNG
Trigger: ACCATTTACTTCACCCCAAGTCCTGCTGCCCATCCAGTTGGGAAGCCATGATTTTCCTAAGAATCCAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CAA 90 bp TTTGCGAAAGACCCTTCTTTGCCCAGGGCCTCCTCACCAAGGCCTAACAGATGGCAGGCACTAATTTCATaGTCATCATCTGGGAAGAGT +
Preference number: 3 (lower is better)
Translates to: FAKDPSLPRASSPRPNRWQALIS*SSSGKS
Trigger: ACTCTTCCCAGATGATGACAATGAAATTAGTGCCTG...CCATCTGTTAGGCCTTGGTGAGGAGGCCCTGGGCAAAGAAGGGTCTTTCGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR TCA 72 bp CTTTCCCCAGTGACCAACAATTTTAATTCCAAGAGGTaGGGATCTCAGGAGGTGGCATTCACCCACCAGGGA +
Preference number: 3 (lower is better)
Translates to: LSPVTNNFNSKR*GSQEVAFTHQG
Trigger: TCCCTGGTGGGTGAATGCCACCTCCTGAGATCCTCACCTCTTGGAATTAAAATTGTTGGTCACTGGGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR TCA 72 bp AAAACATCAAGTCTGGGCTCATCCCTTCAAAACCAGTaGCATGCTGGCATCAGCTTCTGCTCACACTGCCTC +
Preference number: 3 (lower is better)
Translates to: KTSSLGSSLQNQ*HAGISFCSHCL
Trigger: GAGGCAGTGTGAGCAGAAGCTGATGCCAGCATGTCACTGGTTTTGAAGGGATGAGCCCAGACTTGATGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 72 bp AAGTCTGGGCTCATCCCTTCAAAACCAGTGACATGCTaGCATCAGCTTCTGCTCACACTGCCTCACAAAGAA +
Preference number: 3 (lower is better)
Translates to: KSGLIPSKPVTC*HQLLLTLPHKE
Trigger: TTCTTTGTGAGGCAGTGTGAGCAGAAGCTGATGCCAGCATGTCACTGGTTTTGAAGGGATGAGCCCAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 72 bp AGGCAGAAGAGATGCCCAAAGGAGGAAGCGAGAACTTaGAATTGTATCTCCCATGGCCCTGGATTCTTAGGA +
Preference number: 3 (lower is better)
Translates to: RQKRCPKEEART*NCISHGPGFLG
Trigger: TCCTAAGAATCCAGGGCCATGGGAGATACAATTCCAAGTTCTCGCTTCCTCCTTTGGGCATCTCTTCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR GCA 72 bp TCACCAACTAAGAAAGCTCTGTTATTCTGGCCTGGGTaGTTGCTCCAGACTCAGGAACATCTGGTCAACACA +
Preference number: 3 (lower is better)
Translates to: SPTKKALLFWPG*LLQTQEHLVNT
Trigger: TGTGTTGACCAGATGTTCCTGAGTCTGGAGCAAGCACCCAGGCCAGAATAACAGAGCTTTCTTAGTTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 72 bp AGACACAGTCTGGTTGGGACATGCAGTGGCAGCTCCTaGTGTATAACATCTTTCACACACCTTGAGTCTATC +
Preference number: 3 (lower is better)
Translates to: RHSLVGTCSGSS*CITSFTHLESI
Trigger: GATAGACTCAAGGTGTGTGAAAGATGTTATACACCAGGAGCTGCCACTGCATGTCCCAACCAGACTGTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR TCA 72 bp AAAGCTATAGCTTATAGAAAGCTCAAAACCGCCCTCTaGCATCGCTTTGCGAAAGACCCTTCTTTGCCCAGG +
Preference number: 3 (lower is better)
Translates to: KAIAYRKLKTAL*HRFAKDPSLPR
Trigger: CCTGGGCAAAGAAGGGTCTTTCGCAAAGCGATGTCAGAGGGCGGTTTTGAGCTTTCTATAAGCTATAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR GCA 72 bp GTCTTTCACCTGAGCTTTTGTACAAGGCAGGCAAATTaGCTCCTGACCTCAGGCAGATGTTTAAGTCTTCAC +
Preference number: 3 (lower is better)
Translates to: VFHLSFCTRQAN*LLTSGRCLSLH
Trigger: GTGAAGACTTAAACATCTGCCTGAGGTCAGGAGGCAATTTGCCTGCCTTGTACAAAAGCTCAGGTGAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CCA 72 bp GACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTaGGTGCCATCTTGGGGTAGTCCAGATTGTCAATTG +
Preference number: 3 (lower is better)
Translates to: DMLTLGSQKPNT*VPSWGSPDCQL
Trigger: CAATTGACAATCTGGACTACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CAA 90 bp GCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTAGTCCAGATTGTCAATTGTTCTACCCAAATCTACTaGGCTATATCTGTGGATAGT +
Preference number: 3 (lower is better)
Translates to: ARSQTLGCHLGVVQIVNCSTQIY*AISVDS
Trigger: ACTATCCACAGATATAGCCAAGTAGATTTGGGTAGA...ACAATTGACAATCTGGACTACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CAA 90 bp TATTTTCCTCTCCATTCCACTGCAGAATTTGATTCAGGAAAATGGCGGCATGTGAAACCCTACAACTGGTaGCAAACTCAGGCTTTCCCC +
Preference number: 3 (lower is better)
Translates to: YFPLHSTAEFDSGKWRHVKPYNW*QTQAFP
Trigger: GGGGAAAGCCTGAGTTTGCAACCAGTTGTAGGGTTT...CACATGCCGCCATTTTCCTGAATCAAATTCTGCAGTGGAATGGAGAGGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR TCA 72 bp CTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTTaGCTGATCCTGAAATGGTTGGCCTTTCAGCAAGTT +
Preference number: 3 (lower is better)
Translates to: LSHTLSLSACCL*LILKWLAFQQV
Trigger: AACTTGCTGAAAGGCCAACCATTTCAGGATCAGTCAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR TCA 72 bp ACCCTACAACTGGTTGCAAACTCAGGCTTTCCCCAGTaGCCAACAATTTTAATTCCAAGAGGTGAGGATCTC +
Preference number: 3 (lower is better)
Translates to: TLQLVANSGFPQ*PTILIPRGEDL
Trigger: GAGATCCTCACCTCTTGGAATTAAAATTGTTGGTCACTGGGGAAAGCCTGAGTTTGCAACCAGTTGTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CAA 90 bp GACCTTGAGGTTAAAATAAGGACAATCCCAAAACATCAAGTCTGGGCTCATCCCATCTGCTTGCTGCCTTaGACTGATCCTGAAATGGTT +
Preference number: 3 (lower is better)
Translates to: DLEVKIRTIPKHQVWAHPICLLP*TDPEMV
Trigger: AACCATTTCAGGATCAGTCAAAGGCAGCAAGCAGAT...GGGATGAGCCCAGACTTGATGTTTTGGGATTGTCCTTATTTTAACCTCAAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CAA 90 bp AGTGACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGCTTCTTCTGTTTCAATaGGCAGCTCTGTTTCCTAAA +
Preference number: 3 (lower is better)
Translates to: SDMLTLGSQKPNTWVPSWLLLFQ*AALFPK
Trigger: TTTAGGAAACAGAGCTGCCAATTGAAACAGAAGAAG...CCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CAA 90 bp GAGGTTAAAATAAGGACAATCCCAAAACATCAAGTCTGGGCTCATCCCTTCAAATGTGTCCTTTATGTATaGGAGGAGAAGGGCAAAGGG +
Preference number: 3 (lower is better)
Translates to: EVKIRTIPKHQVWAHPFKCVLYV*EEKGKG
Trigger: CCCTTTGCCCTTCTCCTCCAATACATAAAGGACACA...TTTGAAGGGATGAGCCCAGACTTGATGTTTTGGGATTGTCCTTATTTTAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CAA 90 bp TATTTTCCTCTCCATTCCACTGCAGAATTTGATTCAGGAAAATGGCGGCATGTGCTTTCACCTGAGCTTTaGTACAAGGCAGGCAAATTG +
Preference number: 3 (lower is better)
Translates to: YFPLHSTAEFDSGKWRHVLSPEL*YKAGKL
Trigger: CAATTTGCCTGCCTTGTACAAAAGCTCAGGTGAAAG...CACATGCCGCCATTTTCCTGAATCAAATTCTGCAGTGGAATGGAGAGGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR GCA 72 bp AGAGACAGAGAGCAATCATGTTCAATGTCACCATCCTaGCAACCCCCACTCTGTAAAATATACATTATCACC +
Preference number: 3 (lower is better)
Translates to: RDREQSCSMSPS*QPPLCKIYIIT
Trigger: GGTGATAATGTATATTTTACAGAGTGGGGGTTGGCAGGATGGTGACATTGAACATGATTGCTCTCTGTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR-3UTR CAA 90 bp AATCATGTTCAATGTCACCATCCTGCCAACCCCCACTCTGTAAAATATACATTACTTGAGTCTATCTGCTaGCTGCCTTTGACTGATCCT +
Preference number: 3 (lower is better)
Translates to: NHVQCHHPANPHSVKYTLLESIC*LPLTDP
Trigger: AGGATCAGTCAAAGGCAGCAAGCAGATAGACTCAAG...TAATGTATATTTTACAGAGTGGGGGTTGGCAGGATGGTGACATTGAACATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp AGACTGGCTAAAGGGAAAGGCGGATGCTGGGAGAATCTAAGAAGCCTCTACCCCAGGGGTCATTGCCGCTaGTGCCGCCGCTGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: RLAKGKGGCWENLRSLYPRGHCR*CRRCRG
Trigger: GCCCCGGCAGCGGCGGCAGCAGCGGCAATGACCCCT...GGGGTAGAGGCTTCTTAGATTCTCCCAGCATCCGCCTTTCCCTTTAGCCAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp AGACTGGCTAAAGGGAAAGGCGGATGCTGGGAGAATCTAAGAAGCCTCTACCCCCGTGCGGGGCAACCTTaGCCTCCGGCGCGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: RLAKGKGGCWENLRSLYPRAGQP*PPARCP
Trigger: AGGGCAGCGCGCCGGAGGCCAAGGTTGCCCCGCACG...GGGGTAGAGGCTTCTTAGATTCTCCCAGCATCCGCCTTTCCCTTTAGCCAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp GACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTTCTCCAAAGTTGCCGTaGGCGCCGCCGGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: DMLTLGSQKPNTWVPSWGSPKLP*APPAGL
Trigger: CAGCCCCGCCGGCGGCGCGCACGGCAACTTTGGAGA...ACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp GACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTTCGCCTCTCCAAAGTTaGCGTGCGCGCCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: DMLTLGSQKPNTWVPSWGSPLQS*RARRRR
Trigger: CCGCCGGCGGCGCGCACGGCAACTTTGGAGAGGCGA...ACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp CAAGACAGAGGTCTGGGGCATGGAAGGGTAGTGTCTCCTGGGGGCCACAGTTTGCTGGGGGCCACAGTTTaGCCTAGACAGGGCTATTCC +
Preference number: 4 (lower is better)
Translates to: QDRGLGHGRVVSPGGHSLLGATV*PRQGYS
Trigger: GGAATAGCCCTGTCTAGGGCAAACTGTGGCCCCCAG...CAAACTGTGGCCCCCAGGAGACACTACCCTTCCATGCCCCAGACCTCTGTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp GGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTTGTACAAGGCAGGGAGGAGAAGCCGTCTaGGCGCCCGCCGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GRGKTFISVFHLSFCTRQGGEAV*APAACL
Trigger: CAGGCAGGCGGCGGGCGCTCAGACGGCTTCTCCTCC...CTGCCTTGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp GCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTAGTCCAGATTGTCAATTGTAGGTGGGGCAGGGTCTaGCGCTCAGGGGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: ARSQTLGCHLGVVQIVNCRWGRV*RSGVCG
Trigger: GCCACAGACCCCTGAGCGCCAGACCCTGCCCCACCT...ACAATTGACAATCTGGACTACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp CAAGACAGAGGTCTGGGGCATGGAAGGGTAGTGTCTCCTGGGGGCCACAGTTTGAAGTTCCTCCTTGTGTaGGAGAGGCTGACCACACCA +
Preference number: 4 (lower is better)
Translates to: QDRGLGHGRVVSPGGHSLKFLLV*ERLTTP
Trigger: TGGTGTGGTCAGCCTCTCTCACACAAGGAGGAACTT...CAAACTGTGGCCCCCAGGAGACACTACCCTTCCATGCCCCAGACCTCTGTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp GGGAGGCAGAAGAGATGCCCAAAGGAGGAAGCGAGAACTTGGAATTGTATCTCCCACTGGCCCGAGAGCTaGGAGCCTGAGCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: GRQKRCPKEEARTWNCISHWPES*EPEHGA
Trigger: AGCTCCATGCTCAGGCTCTCAGCTCTCGGGCCAGTG...GGAGATACAATTCCAAGTTCTCGCTTCCTCCTTTGGGCATCTCTTCTGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp TTTGCGAAAGACCCTTCTTTGCCCAGGGCCTCCTCACCAAGGCCTAACAGATGGACCATGTTGCCACCATaGGGCAGGTCTGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: FAKDPSLPRASSPRPNRWTMLPP*GRSGTR
Trigger: CCTCGTTCCAGACCTGCCTCATGGTGGCAACATGGT...CCATCTGTTAGGCCTTGGTGAGGAGGCCCTGGGCAAAGAAGGGTCTTTCGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp AGACTGGCTAAAGGGAAAGGCGGATGCTGGGAGAATCTAAGAAGCCTCTACCCCTGGGAGAGGGTGAGCTaGTCCCACCTCTCCACGAAG +
Preference number: 4 (lower is better)
Translates to: RLAKGKGGCWENLRSLYPWERVS*SHLSTK
Trigger: CTTCGTGGAGAGGTGGGACCAGCTCACCCTCTCCCA...GGGGTAGAGGCTTCTTAGATTCTCCCAGCATCCGCCTTTCCCTTTAGCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp GGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTTGTACAAGGCAGCGTCCTGGGGGTGGCTaGGCGAGCATGTGCACGCCT +
Preference number: 4 (lower is better)
Translates to: GRGKTFISVFHLSFCTRQRPGGG*ASMCTP
Trigger: AGGCGTGCACATGCTCGCCCAGCCACCCCCAGGACG...CTGCCTTGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 72 bp GTACTCTCTTCCCACTCTGCGGTTCTGCCAAGCACCTaGCCTGGGCACTTGTGTGTGTGCAAGACTCTACAG +
Preference number: 4 (lower is better)
Translates to: VLSSHSAVLPST*PGHLCVCKTLQ
Trigger: CTGTAGAGTCTTGCACACACACAAGTGCCCAGGCAAGGTGCTTGGCAGAACCGCAGAGTGGGAAGAGAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp TTTGCGAAAGACCCTTCTTTGCCCAGGGCCTCCTCACCAAGGCCTAACAGATGGCTCAAAACCGCCCTCTaGCATCGCTTTGCGAAAGAC +
Preference number: 4 (lower is better)
Translates to: FAKDPSLPRASSPRPNRWLKTAL*HRFAKD
Trigger: GTCTTTCGCAAAGCGATGTCAGAGGGCGGTTTTGAG...CCATCTGTTAGGCCTTGGTGAGGAGGCCCTGGGCAAAGAAGGGTCTTTCGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp TATTTTCCTCTCCATTCCACTGCAGAATTTGATTCAGGAAAATGGCGGCATGTGGGCTGGGCGAGCATGTaGACGCCTCGGCGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: YFPLHSTAEFDSGKWRHVGWASM*TPRRPS
Trigger: ACTGGGGCGCCGAGGCGTGCACATGCTCGCCCAGCC...CACATGCCGCCATTTTCCTGAATCAAATTCTGCAGTGGAATGGAGAGGAAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp GGGAGGCAGAAGAGATGCCCAAAGGAGGAAGCGAGAACTTGGAATTGTATCTCCTGGTGTAGACCAGCGTaGCGAAGGGCCCCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: GRQKRCPKEEARTWNCISWCRPA*RRAPPL
Trigger: TAAAGGAGGGGCCCTTCGGCACGCTGGTCTACACCA...GGAGATACAATTCCAAGTTCTCGCTTCCTCCTTTGGGCATCTCTTCTGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp TTTGCGAAAGACCCTTCTTTGCCCAGGGCCTCCTCACCAAGGCCTAACAGATGGACCTCTCCACGAAGTTaGACAGCCCCGTGTACATCT +
Preference number: 4 (lower is better)
Translates to: FAKDPSLPRASSPRPNRWTSPRS*TAPCTS
Trigger: AGATGTACACGGGGCTGTGCAACTTCGTGGAGAGGT...CCATCTGTTAGGCCTTGGTGAGGAGGCCCTGGGCAAAGAAGGGTCTTTCGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp GGGAGGCAGAAGAGATGCCCAAAGGAGGAAGCGAGAACTTGGAATTGTATCTCCCGCCCTTCTGCCGGATaGAGGCGTAGTGTTTGGACT +
Preference number: 4 (lower is better)
Translates to: GRQKRCPKEEARTWNCISRPSAG*RRSVWT
Trigger: AGTCCAAACACTACGCCTGCATCCGGCAGAAGGGCG...GGAGATACAATTCCAAGTTCTCGCTTCCTCCTTTGGGCATCTCTTCTGCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp CAAGACAGAGGTCTGGGGCATGGAAGGGTAGTGTCTCCTGGGGGCCACAGTTTGAACCCTACAACTGGTTaGAAACTCAGGCTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: QDRGLGHGRVVSPGGHSLNPTTG*KLRLSP
Trigger: TGGGGAAAGCCTGAGTTTGCAACCAGTTGTAGGGTT...CAAACTGTGGCCCCCAGGAGACACTACCCTTCCATGCCCCAGACCTCTGTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp AGACTGGCTAAAGGGAAAGGCGGATGCTGGGAGAATCTAAGAAGCCTCTACCCCCCCAAGGAAACCCGATaGCGGTACTCTCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: RLAKGKGGCWENLRSLYPPKETR*RYSLPT
Trigger: AGTGGGAAGAGAGTACCGGCATCGGGTTTCCTTGGG...GGGGTAGAGGCTTCTTAGATTCTCCCAGCATCCGCCTTTCCCTTTAGCCAGTCT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp GGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTTGTACAAGGCAGAAGGCGTCCTGGGGGTaGCTGGGCGAGCATGTGCAC +
Preference number: 4 (lower is better)
Translates to: GRGKTFISVFHLSFCTRQKASWG*LGEHVH
Trigger: GTGCACATGCTCGCCCAGCCACCCCCAGGACGCCTT...CTGCCTTGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp GACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTTCTTCCCCACCACCTTaGCCCGGATCACGATGTCGG +
Preference number: 4 (lower is better)
Translates to: DMLTLGSQKPNTWVPSWGSSPPP*PGSRCR
Trigger: CCGACATCGTGATCCGGGCCAAGGTGGTGGGGAAGA...ACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp AGACTGGCTAAAGGGAAAGGCGGATGCTGGGAGAATCTAAGAAGCCTCTACCCCCAGACACAGTCTGGTTaGGACATGCAGTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RLAKGKGGCWENLRSLYPQTQSG*DMQWQL
Trigger: GAGCTGCCACTGCATGTCCCAACCAGACTGTGTCTG...GGGGTAGAGGCTTCTTAGATTCTCCCAGCATCCGCCTTTCCCTTTAGCCAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp CAAGACAGAGGTCTGGGGCATGGAAGGGTAGTGTCTCCTGGGGGCCACAGTTTGACTGATGTCCACTTGTaGGAGGGAACTTGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: QDRGLGHGRVVSPGGHSLTDVHL*EGTCVG
Trigger: ACCTACACAAGTTCCCTCCCACAAGTGGACATCAGT...CAAACTGTGGCCCCCAGGAGACACTACCCTTCCATGCCCCAGACCTCTGTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp TCCTGGTGTATAACATCTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTTGTGCCCAGGAGCACGATaGGCCCGAGCCAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: SWCITSFTHLESICLLPLCPGAR*ARAKGS
Trigger: TGACCCCTTGGCTCGGGCTCATCGTGCTCCTGGGCA...CAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGATGTTATACACCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp CAAGACAGAGGTCTGGGGCATGGAAGGGTAGTGTCTCCTGGGGGCCACAGTTTGTTCCACTGCAGAATTTaGTTCAGGAAAATGGCGGCA +
Preference number: 4 (lower is better)
Translates to: QDRGLGHGRVVSPGGHSLFHCRI*FRKMAA
Trigger: TGCCGCCATTTTCCTGAATCAAATTCTGCAGTGGAA...CAAACTGTGGCCCCCAGGAGACACTACCCTTCCATGCCCCAGACCTCTGTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp AGCGAGAACTTGGAATTGTATCTCCCATGGCCCTGGATTCTTAGGAAAATCATGCGCTGCCGGGGCTGCTaGTCGCCTCTCCAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: SENLELYLPWPWILRKIMRCRGC*SPLQSC
Trigger: GCAACTTTGGAGAGGCGAGCAGCAGCCCCGGCAGCG...CATGATTTTCCTAAGAATCCAGGGCCATGGGAGATACAATTCCAAGTTCTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp AATCATGTTCAATGTCACCATCCTGCCAACCCCCACTCTGTAAAATATACATTAGGTCATTGCCGCTGCTaGCGCCGCTGCCGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: NHVQCHHPANPHSVKYTLGHCRC*RRCRGC
Trigger: GCAGCCCCGGCAGCGGCGGCAGCAGCGGCAATGACC...TAATGTATATTTTACAGAGTGGGGGTTGGCAGGATGGTGACATTGAACATGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp GCAACAAATACATTCCTTCTAGACAGGGTTCGAGATCTCTTGTTGGTTTCTCTCGAGCCAAGGGGTCATTaGCGCTGCTGCCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ATNTFLLDRVRDLLLVSLEPRGH*RCCRRC
Trigger: GCAGCGGCGGCAGCAGCGGCAATGACCCCTTGGCTC...GAGAGAAACCAACAAGAGATCTCGAACCCTGTCTAGAAGGAATGTATTTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp GCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTAGTCCAGATTGTCAATTGTTCACGATGTCGGAGTTaGAGAAGGCGTCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: ARSQTLGCHLGVVQIVNCSRCRS*RRRPGG
Trigger: ACCCCCAGGACGCCTTCTGCAACTCCGACATCGTGA...ACAATTGACAATCTGGACTACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp CTTCTAGACAGGGTTCGAGATCTCTTGTTGGTTTCTCTCCATCACTTCTGGGTTGCAGGCAGGACACTCTaGAGCTCTCCCTCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LLDRVRDLLLVSLHHFWVAGRTL*SSPSCA
Trigger: GGCACAGGAGGGAGAGCTGCAGAGTGTCCTGCCTGC...AACCCAGAAGTGATGGAGAGAAACCAACAAGAGATCTCGAACCCTGTCTAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp CTTCTAGACAGGGTTCGAGATCTCTTGTTGGTTTCTCTCCATCACTTCTGGGTTTTGCAGAAGGCGTCCTaGGGGTGGCTGGGCGAGCAT +
Preference number: 4 (lower is better)
Translates to: LLDRVRDLLLVSLHHFWVLQKAS*GWLGEH
Trigger: ATGCTCGCCCAGCCACCCCCAGGACGCCTTCTGCAA...AACCCAGAAGTGATGGAGAGAAACCAACAAGAGATCTCGAACCCTGTCTAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp AGACTGGCTAAAGGGAAAGGCGGATGCTGGGAGAATCTAAGAAGCCTCTACCCCCCTGTCAGCAGGTACTaGTACTTGTTGACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RLAKGKGGCWENLRSLYPPVSRY*YLLTSS
Trigger: GCTGGAGGTCAACAAGTACCAGTACCTGCTGACAGG...GGGGTAGAGGCTTCTTAGATTCTCCCAGCATCCGCCTTTCCCTTTAGCCAGTCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp CAAGACAGAGGTCTGGGGCATGGAAGGGTAGTGTCTCCTGGGGGCCACAGTTTGTCATTCTTTCTGGCATaGCACCAGAAATTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: QDRGLGHGRVVSPGGHSLSFFLA*HQKFPG
Trigger: ACCTGGGAATTTCTGGTGCCATGCCAGAAAGAATGA...CAAACTGTGGCCCCCAGGAGACACTACCCTTCCATGCCCCAGACCTCTGTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp GACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTGAGGATCTCAGGAGGTaGCATTCACCCACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: DMLTLGSQKPNTWVPSWGEDLRR*HSPTRE
Trigger: CTCCCTGGTGGGTGAATGCCACCTCCTGAGATCCTC...ACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 72 bp CTTATAGAAAGCTCAAAACCGCCCTCTGACATCGCTTaGCGAAAGACCCTTCTTTGCCCAGGGCCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LIESSKPPSDIA*RKTLLCPGPPH
Trigger: GTGAGGAGGCCCTGGGCAAAGAAGGGTCTTTCGCAAAGCGATGTCAGAGGGCGGTTTTGAGCTTTCTATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp CTTCTAGACAGGGTTCGAGATCTCTTGTTGGTTTCTCTCCATCACTTCTGGGTTATCCTCGGTACCAGCTaGAGTAGCCGCCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LLDRVRDLLLVSLHHFWVILGTS*SSRPSA
Trigger: GGCAGAAGGGCGGCTACTGCAGCTGGTACCGAGGAT...AACCCAGAAGTGATGGAGAGAAACCAACAAGAGATCTCGAACCCTGTCTAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp AGCGAGAACTTGGAATTGTATCTCCCATGGCCCTGGATTCTTAGGAAAATCATGCCCACTCTGCGGTTCTaGCAAGCACCTTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SENLELYLPWPWILRKIMPTLRF*QAPCLG
Trigger: GCCCAGGCAAGGTGCTTGGCAGAACCGCAGAGTGGG...CATGATTTTCCTAAGAATCCAGGGCCATGGGAGATACAATTCCAAGTTCTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp GACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTCATGGGGCATCTTGGTaGAGCCTCGGTACATCTTCA +
Preference number: 4 (lower is better)
Translates to: DMLTLGSQKPNTWVPSWGHGASW*SLGTSS
Trigger: TGAAGATGTACCGAGGCTTCACCAAGATGCCCCATG...ACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp GAGGCAGGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTTGTACACTGTGCCCAGGCCCTTaGCTACACTCTCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: EAGRGKTFISVFHLSFCTLCPGP*LHSHLP
Trigger: TGGCAGATGAGAGTGTAGTCAAGGGCCTGGGCACAG...TGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCCTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp AATCATGTTCAATGTCACCATCCTGCCAACCCCCACTCTGTAAAATATACATTACGCCGCTGCCGGGGCTaGTGCTCGCCTCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: NHVQCHHPANPHSVKYTLRRCRG*CSPLQS
Trigger: ACTTTGGAGAGGCGAGCAGCAGCCCCGGCAGCGGCG...TAATGTATATTTTACAGAGTGGGGGTTGGCAGGATGGTGACATTGAACATGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp TTTGCGAAAGACCCTTCTTTGCCCAGGGCCTCCTCACCAAGGCCTAACAGATGGGAATTGTGTGTGTGCTaGATCATCTCCGACTCTCTT +
Preference number: 4 (lower is better)
Translates to: FAKDPSLPRASSPRPNRWELCVC*IISDSL
Trigger: AAGAGAGTCGGAGATGATGCAGCACACACACAATTC...CCATCTGTTAGGCCTTGGTGAGGAGGCCCTGGGCAAAGAAGGGTCTTTCGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp AGACTGGCTAAAGGGAAAGGCGGATGCTGGGAGAATCTAAGAAGCCTCTACCCCAAAGGGAAAGGCGGATaGTGGGAGAATCTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: RLAKGKGGCWENLRSLYPKGKGG*WENLRS
Trigger: GCTTCTTAGATTCTCCCAGCATCCGCCTTTCCCTTT...GGGGTAGAGGCTTCTTAGATTCTCCCAGCATCCGCCTTTCCCTTTAGCCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp GGGAGGCAGAAGAGATGCCCAAAGGAGGAAGCGAGAACTTGGAATTGTATCTCCTCTCCCCCTGCCAAATaGCATGACCACAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: GRQKRCPKEEARTWNCISSPPAK*HDHNGK
Trigger: TTTCCCATTGTGGTCATGCCATTTGGCAGGGGGAGA...GGAGATACAATTCCAAGTTCTCGCTTCCTCCTTTGGGCATCTCTTCTGCCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 72 bp ACTTGGGTGCCATCTTGGGGTAGTCCAGATTGTCAATaGTCACATGCAAGACAGAGGTCTGGGGCATGGAAG +
Preference number: 4 (lower is better)
Translates to: TWVPSWGSPDCQ*SHARQRSGAWK
Trigger: CTTCCATGCCCCAGACCTCTGTCTTGCATGTGACAATTGACAATCTGGACTACCCCAAGATGGCACCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp GGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTTGTACAAGGCAGCTCTCATCTGCCATCTaGGCTAAGCCAGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GRGKTFISVFHLSFCTRQLSSAI*AKPGRQ
Trigger: CTGCCTTCCTGGCTTAGCTCAGATGGCAGATGAGAG...CTGCCTTGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp TCTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTTGACTGATCCTGAAATGTTGTGTGAGAGAGGCTaGCCACACCAGGGAGTGCGA +
Preference number: 4 (lower is better)
Translates to: SFTHLESICLLPLTDPEMLCERG*PHQGVR
Trigger: TCGCACTCCCTGGTGTGGTCAGCCTCTCTCACACAA...CATTTCAGGATCAGTCAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp AGTGACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGGCTGGCATCAGCTTCTaGTCACACTGCCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: SDMLTLGSQKPNTWVPSWAGISF*SHCLTK
Trigger: CTTTGTGAGGCAGTGTGAGCAGAAGCTGATGCCAGC...CCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp AGTGACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGTCAGGGGCCCCACCATaGGAGACCTTGAGGTTAAAA +
Preference number: 4 (lower is better)
Translates to: SDMLTLGSQKPNTWVPSWSGAPP*ETLRLK
Trigger: TTTTAACCTCAAGGTCTCGCATGGTGGGGCCCCTGA...CCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp AGCGAGAACTTGGAATTGTATCTCCCATGGCCCTGGATTCTTAGGAAAATCATGGACCACACCAGGGAGTaGGAATGGCCAGATGCCTCA +
Preference number: 4 (lower is better)
Translates to: SENLELYLPWPWILRKIMDHTRE*EWPDAS
Trigger: TGAGGCATCTGGCCATTCGCACTCCCTGGTGTGGTC...CATGATTTTCCTAAGAATCCAGGGCCATGGGAGATACAATTCCAAGTTCTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp GACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTTACTCCAGGAGCCATTaGGATTCCAATAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: DMLTLGSQKPNTWVPSWGYSRSH*DSNREE
Trigger: CTCCTCCCTATTGGAATCCCAATGGCTCCTGGAGTA...ACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp TATTTTCCTCTCCATTCCACTGCAGAATTTGATTCAGGAAAATGGCGGCATGTGGGCTTCCCAACTGGATaGGCAGCAGGACTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: YFPLHSTAEFDSGKWRHVGFPTG*AAGLGV
Trigger: CACCCCAAGTCCTGCTGCCCATCCAGTTGGGAAGCC...CACATGCCGCCATTTTCCTGAATCAAATTCTGCAGTGGAATGGAGAGGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 72 bp AAGTTCTCCCCTTCCTCTCGCCTCCAAAGAGCCAATTaGGAAGTTGTTGTCACATCCACCTCCCCTACTTTC +
Preference number: 4 (lower is better)
Translates to: KFSPSSRLQRAN*EVVVTSTSPTF
Trigger: GAAAGTAGGGGAGGTGGATGTGACAACAACTTCCAAATTGGCTCTTTGGAGGCGAGAGGAAGGGGAGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp GACCTTGAGGTTAAAATAAGGACAATCCCAAAACATCAAGTCTGGGCTCATCCCAAAGGCCCCCAAACATaGAGCAGGGACAAGGAGACG +
Preference number: 4 (lower is better)
Translates to: DLEVKIRTIPKHQVWAHPKGPQT*SRDKET
Trigger: CGTCTCCTTGTCCCTGCTTCATGTTTGGGGGCCTTT...GGGATGAGCCCAGACTTGATGTTTTGGGATTGTCCTTATTTTAACCTCAAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp CACAACAGAAACCCTACAACTGGTTGCAAACTCAGGCTTTCCCCAGTGACCAACTCAATGTCACCATCCTaGCAACCCCCACTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: HNRNPTTGCKLRLSPVTNSMSPS*QPPLCK
Trigger: TTTACAGAGTGGGGGTTGGCAGGATGGTGACATTGA...GTTGGTCACTGGGGAAAGCCTGAGTTTGCAACCAGTTGTAGGGTTTCTGTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp GACCTTGAGGTTAAAATAAGGACAATCCCAAAACATCAAGTCTGGGCTCATCCCCGAAAGACCCTTCTTTaGCCAGGGCCTCCTCACCAA +
Preference number: 4 (lower is better)
Translates to: DLEVKIRTIPKHQVWAHPRKTLL*PGPPHQ
Trigger: TTGGTGAGGAGGCCCTGGGCAAAGAAGGGTCTTTCG...GGGATGAGCCCAGACTTGATGTTTTGGGATTGTCCTTATTTTAACCTCAAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp GACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTTTGTCAATTGTCACATaGAAGACAGAGGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: DMLTLGSQKPNTWVPSWGLSIVT*KTEVWG
Trigger: GCCCCAGACCTCTGTCTTGCATGTGACAATTGACAA...ACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp TTTGCGAAAGACCCTTCTTTGCCCAGGGCCTCCTCACCAAGGCCTAACAGATGGATAAAAGAAAGCTCCTaGCCAAATCTACCAAAGCGT +
Preference number: 4 (lower is better)
Translates to: FAKDPSLPRASSPRPNRWIKESS*PNLPKR
Trigger: ACGCTTTGGTAGATTTGGCCAGGAGCTTTCTTTTAT...CCATCTGTTAGGCCTTGGTGAGGAGGCCCTGGGCAAAGAAGGGTCTTTCGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp CAAGACAGAGGTCTGGGGCATGGAAGGGTAGTGTCTCCTGGGGGCCACAGTTTGCTCTGTTTCCTAAAGTaGAATGAACTGAAGATACAA +
Preference number: 4 (lower is better)
Translates to: QDRGLGHGRVVSPGGHSLLCFLK*NELKIQ
Trigger: TTGTATCTTCAGTTCATTCCACTTTAGGAAACAGAG...CAAACTGTGGCCCCCAGGAGACACTACCCTTCCATGCCCCAGACCTCTGTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp CACAACAGAAACCCTACAACTGGTTGCAAACTCAGGCTTTCCCCAGTGACCAACAAACCAGTGACATGCTaGCATCAGCTTCTGCTCACA +
Preference number: 4 (lower is better)
Translates to: HNRNPTTGCKLRLSPVTNKPVTC*HQLLLT
Trigger: TGTGAGCAGAAGCTGATGCCAGCATGTCACTGGTTT...GTTGGTCACTGGGGAAAGCCTGAGTTTGCAACCAGTTGTAGGGTTTCTGTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp TCCTGGTGTATAACATCTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTTGACCAGGGAGTGCGAATaGCCAGATGCCTCACAGAGA +
Preference number: 4 (lower is better)
Translates to: SWCITSFTHLESICLLPLTRECE*PDASQR
Trigger: TCTCTGTGAGGCATCTGGCCATTCGCACTCCCTGGT...CAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGATGTTATACACCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp TCCTGGTGTATAACATCTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTTGTCATGGCTTCCCAACTaGATGGGCAGCAGGACTTGG +
Preference number: 4 (lower is better)
Translates to: SWCITSFTHLESICLLPLSWLPN*MGSRTW
Trigger: CCAAGTCCTGCTGCCCATCCAGTTGGGAAGCCATGA...CAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGATGTTATACACCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp GGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTTGTACAAGGCAGACCATGAGGCAGGTCTaGAACGAGGGGAGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: GRGKTFISVFHLSFCTRQTMRQV*NEGRVK
Trigger: TTTTACCCTCCCCTCGTTCCAGACCTGCCTCATGGT...CTGCCTTGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp GCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTAGTCCAGATTGTCAATTGTACATATCCCCCTAGGTaGGCTAAACACTATTCTGGA +
Preference number: 4 (lower is better)
Translates to: ARSQTLGCHLGVVQIVNCTYPPR*AKHYSG
Trigger: TCCAGAATAGTGTTTAGCTCACCTAGGGGGATATGT...ACAATTGACAATCTGGACTACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp TCCTGGTGTATAACATCTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTTGCCCTGCCAAATGGCATaGCCACAATGGGAAAGGTAC +
Preference number: 4 (lower is better)
Translates to: SWCITSFTHLESICLLPLPCQMA*PQWERY
Trigger: GTACCTTTCCCATTGTGGTCATGCCATTTGGCAGGG...CAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGATGTTATACACCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp CTTCTAGACAGGGTTCGAGATCTCTTGTTGGTTTCTCTCCATCACTTCTGGGTTTCCCTTCAAAACCAGTaGCATGCTGGCATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LLDRVRDLLLVSLHHFWVSLQNQ*HAGISF
Trigger: GAAGCTGATGCCAGCATGTCACTGGTTTTGAAGGGA...AACCCAGAAGTGATGGAGAGAAACCAACAAGAGATCTCGAACCCTGTCTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp CTTCTAGACAGGGTTCGAGATCTCTTGTTGGTTTCTCTCCATCACTTCTGGGTTTCCGTATGGATGTACTaGACATGGGGCATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LLDRVRDLLLVSLHHFWVSVWMY*TWGILV
Trigger: CACCAAGATGCCCCATGTGCAGTACATCCATACGGA...AACCCAGAAGTGATGGAGAGAAACCAACAAGAGATCTCGAACCCTGTCTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp GAGGCAGGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTTGTACATTATTCTGGCCTGGGTaGTTGCTCCAGACTCAGGAA +
Preference number: 4 (lower is better)
Translates to: EAGRGKTFISVFHLSFCTLFWPG*LLQTQE
Trigger: TTCCTGAGTCTGGAGCAAGCACCCAGGCCAGAATAA...TGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCCTGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp CTTCTAGACAGGGTTCGAGATCTCTTGTTGGTTTCTCTCCATCACTTCTGGGTTCCTCTGACATCGCTTTaGGAAAGACCCTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: LLDRVRDLLLVSLHHFWVPLTSL*ERPFFA
Trigger: GGCAAAGAAGGGTCTTTCGCAAAGCGATGTCAGAGG...AACCCAGAAGTGATGGAGAGAAACCAACAAGAGATCTCGAACCCTGTCTAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp TCTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTTGACTGATCCTGAAATGTCGGAAGCTTCCGTATaGATGTACTGCACATGGGGC +
Preference number: 4 (lower is better)
Translates to: SFTHLESICLLPLTDPEMSEASV*MYCTWG
Trigger: GCCCCATGTGCAGTACATCCATACGGAAGCTTCCGA...CATTTCAGGATCAGTCAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp GACCTTGAGGTTAAAATAAGGACAATCCCAAAACATCAAGTCTGGGCTCATCCCCAGACAGACACAGTCTaGTTGGGACATGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: DLEVKIRTIPKHQVWAHPQTDTV*LGHAVA
Trigger: TGCCACTGCATGTCCCAACCAGACTGTGTCTGTCTG...GGGATGAGCCCAGACTTGATGTTTTGGGATTGTCCTTATTTTAACCTCAAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp TCTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTTGACTGATCCTGAAATGCAAGCATCACTGGGCTaGGGAATTGTGTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SFTHLESICLLPLTDPEMQASLG*GIVCVL
Trigger: CAGCACACACACAATTCCCCAGCCCAGTGATGCTTG...CATTTCAGGATCAGTCAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp CTTCTAGACAGGGTTCGAGATCTCTTGTTGGTTTCTCTCCATCACTTCTGGGTTCAACACAAGCATCACTaGGCTGGGGAATTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LLDRVRDLLLVSLHHFWVQHKHH*AGELCV
Trigger: CACACACAATTCCCCAGCCCAGTGATGCTTGTGTTG...AACCCAGAAGTGATGGAGAGAAACCAACAAGAGATCTCGAACCCTGTCTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp GAGGCAGGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTTGTACATCTGTTATTCTGGCCTaGGTGCTTGCTCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: EAGRGKTFISVFHLSFCTSVILA*VLAPDS
Trigger: TGAGTCTGGAGCAAGCACCCAGGCCAGAATAACAGA...TGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCCTGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp AGACTGGCTAAAGGGAAAGGCGGATGCTGGGAGAATCTAAGAAGCCTCTACCCCTCCAAAGAGCCAATTTaGAAGTTGTTGTCACATCCA +
Preference number: 4 (lower is better)
Translates to: RLAKGKGGCWENLRSLYPSKEPI*KLLSHP
Trigger: TGGATGTGACAACAACTTCCAAATTGGCTCTTTGGA...GGGGTAGAGGCTTCTTAGATTCTCCCAGCATCCGCCTTTCCCTTTAGCCAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp GACCTTGAGGTTAAAATAAGGACAATCCCAAAACATCAAGTCTGGGCTCATCCCGGGAAAGGCGGATGCTaGGAGAATCTAAGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: DLEVKIRTIPKHQVWAHPGKGGC*ENLRSL
Trigger: GAGGCTTCTTAGATTCTCCCAGCATCCGCCTTTCCC...GGGATGAGCCCAGACTTGATGTTTTGGGATTGTCCTTATTTTAACCTCAAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp GAGGCAGGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTTGTACATCTCAGTCTTTCACCTaGGCTTTTGTACAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: EAGRGKTFISVFHLSFCTSQSFT*AFVQGR
Trigger: CCTGCCTTGTACAAAAGCTCAGGTGAAAGACTGAGA...TGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCCTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp GCAACAAATACATTCCTTCTAGACAGGGTTCGAGATCTCTTGTTGGTTTCTCTCACAAGGCAGGCAAATTaGCTCCTGACCTCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: ATNTFLLDRVRDLLLVSLTRQAN*LLTSGR
Trigger: TCTGCCTGAGGTCAGGAGGCAATTTGCCTGCCTTGT...GAGAGAAACCAACAAGAGATCTCGAACCCTGTCTAGAAGGAATGTATTTGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp GAGGCAGGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTTGTACAACTTGGGTGCCATCTTaGGGTAGTCCAGATTGTCAA +
Preference number: 4 (lower is better)
Translates to: EAGRGKTFISVFHLSFCTTWVPS*GSPDCQ
Trigger: TTGACAATCTGGACTACCCCAAGATGGCACCCAAGT...TGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCCTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp TCTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTTGACTGATCCTGAAATGTTCAGGACAGCAGACTaGCTAAAGGGAAAGGCGGAT +
Preference number: 4 (lower is better)
Translates to: SFTHLESICLLPLTDPEMFRTAD*LKGKAD
Trigger: ATCCGCCTTTCCCTTTAGCCAGTCTGCTGTCCTGAA...CATTTCAGGATCAGTCAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 72 bp AGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTaGTACAAGGCAGGCAAATTGCCTCCTGACCTCAGG +
Preference number: 4 (lower is better)
Translates to: RKDIHLSLSPEL*YKAGKLPPDLR
Trigger: CCTGAGGTCAGGAGGCAATTTGCCTGCCTTGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp GCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTAGTCCAGATTGTCAATTGTCCAATAAACCCCATATaGCAGCATAGACCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: ARSQTLGCHLGVVQIVNCPINPI*QHRPFF
Trigger: AAAGAAAGGTCTATGCTGTCATATGGGGTTTATTGG...ACAATTGACAATCTGGACTACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp TCTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTTGACTGATCCTGAAATGTCTGCTTGCTGCCTTTaGCTGATCCTGAAATGGTTG +
Preference number: 4 (lower is better)
Translates to: SFTHLESICLLPLTDPEMSACCL*LILKWL
Trigger: CAACCATTTCAGGATCAGTCAAAGGCAGCAAGCAGA...CATTTCAGGATCAGTCAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp TCCTGGTGTATAACATCTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTTGATCTTTCACACACCTTaGGTCTATCTGCTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SWCITSFTHLESICLLPLIFHTP*VYLLAA
Trigger: GGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGAT...CAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGATGTTATACACCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp TCCTGGTGTATAACATCTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTTGTTTAATTCCAAGAGGTaGGGATCTCAGGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SWCITSFTHLESICLLPLFNSKR*GSQEVA
Trigger: TGCCACCTCCTGAGATCCTCACCTCTTGGAATTAAA...CAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGATGTTATACACCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp AATCATGTTCAATGTCACCATCCTGCCAACCCCCACTCTGTAAAATATACATTAGCCCCGTGTACATCTTaGCATCATAGACGCGACCTG +
Preference number: 4 (lower is better)
Translates to: NHVQCHHPANPHSVKYTLAPCTS*HHRRDL
Trigger: CAGGTCGCGTCTATGATGGCAAGATGTACACGGGGC...TAATGTATATTTTACAGAGTGGGGGTTGGCAGGATGGTGACATTGAACATGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp GGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTTGTACAAGGCAGCACCTTGAGTCTATCTaGTTGCTGCCTTTGACTGAT +
Preference number: 4 (lower is better)
Translates to: GRGKTFISVFHLSFCTRQHLESI*LLPLTD
Trigger: ATCAGTCAAAGGCAGCAAGCAGATAGACTCAAGGTG...CTGCCTTGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp GAGGCAGGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTTGTACAAGAGACACTCGTTCTTaGAAGTCACAAAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: EAGRGKTFISVFHLSFCTRDTRS*KSQSKA
Trigger: TGCCTTGCTTTGTGACTTCCAAGAACGAGTGTCTCT...TGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCCTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp TATTTTCCTCTCCATTCCACTGCAGAATTTGATTCAGGAAAATGGCGGCATGTGCAGGGTAACCGAAATTaGAGAGCATGTCGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: YFPLHSTAEFDSGKWRHVQGNRN*RACRSR
Trigger: TCTGGACCGACATGCTCTCCAATTTCGGTTACCCTG...CACATGCCGCCATTTTCCTGAATCAAATTCTGCAGTGGAATGGAGAGGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp GCAACAAATACATTCCTTCTAGACAGGGTTCGAGATCTCTTGTTGGTTTCTCTCAAAGCTCTGTTATTCTaGCCTGGGTGCTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: ATNTFLLDRVRDLLLVSLKALLF*PGCLLQ
Trigger: CTGGAGCAAGCACCCAGGCCAGAATAACAGAGCTTT...GAGAGAAACCAACAAGAGATCTCGAACCCTGTCTAGAAGGAATGTATTTGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp TCTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTTGACTGATCCTGAAATGCCAAGGCCTAACAGATaGGGATGTGGTTCTGCTAAT +
Preference number: 4 (lower is better)
Translates to: SFTHLESICLLPLTDPEMPRPNR*GCGSAN
Trigger: ATTAGCAGAACCACATCCCCATCTGTTAGGCCTTGG...CATTTCAGGATCAGTCAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp TATTTTCCTCTCCATTCCACTGCAGAATTTGATTCAGGAAAATGGCGGCATGTGCAGAAGCCAAACACTTaGGTGCCATCTTGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: YFPLHSTAEFDSGKWRHVQKPNT*VPSWGS
Trigger: ACTACCCCAAGATGGCACCCAAGTGTTTGGCTTCTG...CACATGCCGCCATTTTCCTGAATCAAATTCTGCAGTGGAATGGAGAGGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 72 bp ACTGATCCTGAAATGGTTGGCCTTTCAGCAAGTTCCTaGTCTGTGTCCTTTATGTATTGGAGGAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: TDPEMVGLSASS*SVSFMYWRRRA
Trigger: TGCCCTTCTCCTCCAATACATAAAGGACACAGACAAGGAACTTGCTGAAAGGCCAACCATTTCAGGATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 72 bp TCTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTaGACTGATCCTGAAATGGTTGGCCTTTCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: SFTHLESICLLP*TDPEMVGLSAS
Trigger: ACTTGCTGAAAGGCCAACCATTTCAGGATCAGTCAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 72 bp AGTCTTTCACCTGAGCTTTTGTACAAGGCAGGCAAATaGCCTCCTGACCTCAGGCAGATGTTTAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SLSPELLYKAGK*PPDLRQMFKSS
Trigger: TGAAGACTTAAACATCTGCCTGAGGTCAGGAGGCAATTTGCCTGCCTTGTACAAAAGCTCAGGTGAAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 72 bp CTTCCTCTCGCCTCCAAAGAGCCAATTTGGAAGTTGTaGTCACATCCACCTCCCCTACTTTCCATTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LPLASKEPIWKL*SHPPPLLSILF
Trigger: AAACAAAATGGAAAGTAGGGGAGGTGGATGTGACAACAACTTCCAAATTGGCTCTTTGGAGGCGAGAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp TATTTTCCTCTCCATTCCACTGCAGAATTTGATTCAGGAAAATGGCGGCATGTGTCCCTCACTCTTACATaGAGACACAGACAGACACAG +
Preference number: 4 (lower is better)
Translates to: YFPLHSTAEFDSGKWRHVSLTLT*RHRQTQ
Trigger: CTGTGTCTGTCTGTGTCTGCATGTAAGAGTGAGGGA...CACATGCCGCCATTTTCCTGAATCAAATTCTGCAGTGGAATGGAGAGGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp GAGGTTAAAATAAGGACAATCCCAAAACATCAAGTCTGGGCTCATCCCTTCAAAGGGGAATTGTGTGTGTaGTGCATCATCTCCGACTCT +
Preference number: 4 (lower is better)
Translates to: EVKIRTIPKHQVWAHPFKGELCV*CIISDS
Trigger: AGAGTCGGAGATGATGCAGCACACACACAATTCCCC...TTTGAAGGGATGAGCCCAGACTTGATGTTTTGGGATTGTCCTTATTTTAACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp AATCATGTTCAATGTCACCATCCTGCCAACCCCCACTCTGTAAAATATACATTATGCAGGCGTAGTGTTTaGACTGGTAGCCAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: NHVQCHHPANPHSVKYTLCRRSV*TGSQGN
Trigger: GTTACCCTGGCTACCAGTCCAAACACTACGCCTGCA...TAATGTATATTTTACAGAGTGGGGGTTGGCAGGATGGTGACATTGAACATGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp GACCTTGAGGTTAAAATAAGGACAATCCCAAAACATCAAGTCTGGGCTCATCCCAGACTCAGGAACATCTaGTCAACACAAGCATCACTG +
Preference number: 4 (lower is better)
Translates to: DLEVKIRTIPKHQVWAHPRLRNI*STQASL
Trigger: CAGTGATGCTTGTGTTGACCAGATGTTCCTGAGTCT...GGGATGAGCCCAGACTTGATGTTTTGGGATTGTCCTTATTTTAACCTCAAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp GGGAGGCAGAAGAGATGCCCAAAGGAGGAAGCGAGAACTTGGAATTGTATCTCCTCTGTGGATAGTGTATaGTGTGTGTATTTATCCAAT +
Preference number: 4 (lower is better)
Translates to: GRQKRCPKEEARTWNCISSVDSV*CVYLSN
Trigger: ATTGGATAAATACACACACCATACACTATCCACAGA...GGAGATACAATTCCAAGTTCTCGCTTCCTCCTTTGGGCATCTCTTCTGCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp TCCTGGTGTATAACATCTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTTGCCAAAACATCAAGTCTaGGCTCATCCCTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: SWCITSFTHLESICLLPLPKHQV*AHPFKT
Trigger: GGTTTTGAAGGGATGAGCCCAGACTTGATGTTTTGG...CAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGATGTTATACACCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp AGATTATATTATCACGAAGAAGAGGAATACAGGTTCCTCATTCTTTCTGGCATGAAGGGTAGTGTCTCCTaGGGGCCACAGTTTGCCCTA +
Preference number: 4 (lower is better)
Translates to: RLYYHEEEEYRFLILSGMKGSVS*GPQFAL
Trigger: TAGGGCAAACTGTGGCCCCCAGGAGACACTACCCTT...CATGCCAGAAAGAATGAGGAACCTGTATTCCTCTTCTTCGTGATAATATAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp AATCATGTTCAATGTCACCATCCTGCCAACCCCCACTCTGTAAAATATACATTAACATCTTCATCTGCTTaGTGGTGTAGACCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: NHVQCHHPANPHSVKYTLTSSSA*WCRPAC
Trigger: GCACGCTGGTCTACACCATCAAGCAGATGAAGATGT...TAATGTATATTTTACAGAGTGGGGGTTGGCAGGATGGTGACATTGAACATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp AGTGACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGCCAGGTGGAAATGAATaGTGTCAAAACCAAAAAGAA +
Preference number: 4 (lower is better)
Translates to: SDMLTLGSQKPNTWVPSWPGGNE*CQNQKE
Trigger: TTCTTTTTGGTTTTGACATCATTCATTTCCACCTGG...CCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp AGATTATATTATCACGAAGAAGAGGAATACAGGTTCCTCATTCTTTCTGGCATGGTGCGAATGGCCAGATaGCTCACAGAGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: RLYYHEEEEYRFLILSGMVRMAR*LTEKTL
Trigger: CAGTGTCTTCTCTGTGAGGCATCTGGCCATTCGCAC...CATGCCAGAAAGAATGAGGAACCTGTATTCCTCTTCTTCGTGATAATATAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp AGATTATATTATCACGAAGAAGAGGAATACAGGTTCCTCATTCTTTCTGGCATGAGCCAAACACTTGGGTaGCATCTTGGGGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: RLYYHEEEEYRFLILSGMSQTLG*HLGVVQ
Trigger: CTGGACTACCCCAAGATGGCACCCAAGTGTTTGGCT...CATGCCAGAAAGAATGAGGAACCTGTATTCCTCTTCTTCGTGATAATATAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp CTTCTAGACAGGGTTCGAGATCTCTTGTTGGTTTCTCTCCATCACTTCTGGGTTAAGAAGCAAGAGGGGTaGGAATTACAATCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: LLDRVRDLLLVSLHHFWVKKQEG*ELQSSN
Trigger: ATTTGAGGATTGTAATTCCCACCCCTCTTGCTTCTT...AACCCAGAAGTGATGGAGAGAAACCAACAAGAGATCTCGAACCCTGTCTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp GAGGTTAAAATAAGGACAATCCCAAAACATCAAGTCTGGGCTCATCCCTTCAAAGAGGAAGCGAGAACTTaGAATTGTATCTCCCATGGC +
Preference number: 4 (lower is better)
Translates to: EVKIRTIPKHQVWAHPFKEEART*NCISHG
Trigger: GCCATGGGAGATACAATTCCAAGTTCTCGCTTCCTC...TTTGAAGGGATGAGCCCAGACTTGATGTTTTGGGATTGTCCTTATTTTAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp AGATTATATTATCACGAAGAAGAGGAATACAGGTTCCTCATTCTTTCTGGCATGCAGTATTACCTACCCTaGACAGAGCAGAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: RLYYHEEEEYRFLILSGMQYYLP*TEQSTG
Trigger: GCCAGTGCTCTGCTCTGTCCAGGGTAGGTAATACTG...CATGCCAGAAAGAATGAGGAACCTGTATTCCTCTTCTTCGTGATAATATAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 72 bp TGTATAACATCTTTCACACACCTTGAGTCTATCTGCTaGCTGCCTTTGACTGATCCTGAAATGGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: CITSFTHLESIC*LPLTDPEMVGL
Trigger: AAGGCCAACCATTTCAGGATCAGTCAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGATGTTATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR TCA 90 bp GCAACAAATACATTCCTTCTAGACAGGGTTCGAGATCTCTTGTTGGTTTCTCTCTCAGGCTTTCCCCAGTaGCCAACAATTTTAATTCCA +
Preference number: 4 (lower is better)
Translates to: ATNTFLLDRVRDLLLVSLSGFPQ*PTILIP
Trigger: TGGAATTAAAATTGTTGGTCACTGGGGAAAGCCTGA...GAGAGAAACCAACAAGAGATCTCGAACCCTGTCTAGAAGGAATGTATTTGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp TATTTTCCTCTCCATTCCACTGCAGAATTTGATTCAGGAAAATGGCGGCATGTGACCAGTCTAGCTGCTTaGCTAGAAGTATTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: YFPLHSTAEFDSGKWRHVTSLAA*LEVFSS
Trigger: AGAGGAAAATACTTCTAGGCAAGCAGCTAGACTGGT...CACATGCCGCCATTTTCCTGAATCAAATTCTGCAGTGGAATGGAGAGGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp AGATTATATTATCACGAAGAAGAGGAATACAGGTTCCTCATTCTTTCTGGCATGGTTCAAGAACCATGTTaGCACCATGAGGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RLYYHEEEEYRFLILSGMVQEPC*HHEAGL
Trigger: CAGACCTGCCTCATGGTGGCAACATGGTTCTTGAAC...CATGCCAGAAAGAATGAGGAACCTGTATTCCTCTTCTTCGTGATAATATAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp GACCTTGAGGTTAAAATAAGGACAATCCCAAAACATCAAGTCTGGGCTCATCCCTTCATTGTCATCATCTaGGAAGAGTTAGTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: DLEVKIRTIPKHQVWAHPFIVII*EELVSK
Trigger: CTTGGACACTAACTCTTCCCAGATGATGACAATGAA...GGGATGAGCCCAGACTTGATGTTTTGGGATTGTCCTTATTTTAACCTCAAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
3UTR CAA 72 bp CCTAGAAGTATTTTCCTCTCCATTCCACTGCAGAATTaGATTCAGGAAAATGGCGGCATGTGGGTTTCATTT +
Preference number: 4 (lower is better)
Translates to: PRSIFLSIPLQN*IQENGGMWVSF
Trigger: AAATGAAACCCACATGCCGCCATTTTCCTGAATCAAATTCTGCAGTGGAATGGAGAGGAAAATACTTCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp AATCATGTTCAATGTCACCATCCTGCCAACCCCCACTCTGTAAAATATACATTACAGAAACCCTACAACTaGTTGCAAACTCAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: NHVQCHHPANPHSVKYTLQKPYN*LQTQAF
Trigger: GAAAGCCTGAGTTTGCAACCAGTTGTAGGGTTTCTG...TAATGTATATTTTACAGAGTGGGGGTTGGCAGGATGGTGACATTGAACATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp AGATTATATTATCACGAAGAAGAGGAATACAGGTTCCTCATTCTTTCTGGCATGGTTCCTCATTCTTTCTaGCATGGCACCAGAAATTCC +
Preference number: 4 (lower is better)
Translates to: RLYYHEEEEYRFLILSGMVPHSF*HGTRNS
Trigger: GGAATTTCTGGTGCCATGCCAGAAAGAATGAGGAAC...CATGCCAGAAAGAATGAGGAACCTGTATTCCTCTTCTTCGTGATAATATAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CCA 90 bp AGATTATATTATCACGAAGAAGAGGAATACAGGTTCCTCATTCTTTCTGGCATGTGCAGTGGCAGCTCCTaGTGTATAACATCTTTCACA +
Preference number: 4 (lower is better)
Translates to: RLYYHEEEEYRFLILSGMCSGSS*CITSFT
Trigger: TGTGAAAGATGTTATACACCAGGAGCTGCCACTGCA...CATGCCAGAAAGAATGAGGAACCTGTATTCCTCTTCTTCGTGATAATATAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR GCA 90 bp AGATTATATTATCACGAAGAAGAGGAATACAGGTTCCTCATTCTTTCTGGCATGATTCACCAGTCTAGCTaGTTGCCTAGAAGTATTTTC +
Preference number: 4 (lower is better)
Translates to: RLYYHEEEEYRFLILSGMIHQSS*LPRSIF
Trigger: GAAAATACTTCTAGGCAAGCAGCTAGACTGGTGAAT...CATGCCAGAAAGAATGAGGAACCTGTATTCCTCTTCTTCGTGATAATATAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS GCA 90 bp GGGCCGTGCGGGGCAACCTTGGCCTCCGGCGCGCTGCCCTCCGAGTaGCCGGCGGGACGGGATGGGGCGCAGCGAGGCTGCCTCGGCGCT +
Preference number: 5 (lower is better)
Translates to: GPCGATLASGALPSE*PAGRDGAQRGCLGA
Trigger: AGCGCCGAGGCAGCCTCGCTGCGCCCCATCCCGTCCCGCCGGGCACTCGGAGGGCAGCGCGCCGGAGGCCAAGGTTGCCCCGCACGGCCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS CCA 90 bp CTGCAGCCCGAGCTCGCTCGCCCGCCGGGCCGTGCGGGGCAACCTTaGCCTCCGGCGCGCTGCCCTCCGAGTGCCCGGCGGGACGGGATG +
Preference number: 5 (lower is better)
Translates to: LQPELARPPGRAGQP*PPARCPPSARRDGM
Trigger: CATCCCGTCCCGCCGGGCACTCGGAGGGCAGCGCGCCGGAGGCCAAGGTTGCCCCGCACGGCCCGGCGGGCGAGCGAGCTCGGGCTGCAG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS GCA 90 bp TGCTGCTCGCCTCTCCAAAGTTGCCGTGCGCGCCGCCGGCGGGGCTaGTGCAGCCCGAGCTCGCTCGCCCGCCGGGCCGTGCGGGGCAAC +
Preference number: 5 (lower is better)
Translates to: CCSPLQSCRARRRRG*CSPSSLARRAVRGN
Trigger: GTTGCCCCGCACGGCCCGGCGGGCGAGCGAGCTCGGGCTGCAGCAGCCCCGCCGGCGGCGCGCACGGCAACTTTGGAGAGGCGAGCAGCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS GCA 90 bp TGCTCGCCTCTCCAAAGTTGCCGTGCGCGCCGCCGGCGGGGCTGCTaGAGCCCGAGCTCGCTCGCCCGCCGGGCCGTGCGGGGCAACCTT +
Preference number: 5 (lower is better)
Translates to: CSPLQSCRARRRRGC*SPSSLARRAVRGNL
Trigger: AAGGTTGCCCCGCACGGCCCGGCGGGCGAGCGAGCTCGGGCTGCAGCAGCCCCGCCGGCGGCGCGCACGGCAACTTTGGAGAGGCGAGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS GCA 90 bp CACGATGAGCCCGAGCCAAGGGGTCATTGCCGCTGCTGCCGCCGCTaGCGGGGCTGCTGCTCGCCTCTCCAAAGTTGCCGTGCGCGCCGC +
Preference number: 5 (lower is better)
Translates to: HDEPEPRGHCRCCRR*RGCCSPLQSCRARR
Trigger: GCGGCGCGCACGGCAACTTTGGAGAGGCGAGCAGCAGCCCCGGCAGCGGCGGCAGCAGCGGCAATGACCCCTTGGCTCGGGCTCATCGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS GCA 90 bp GCCCAGGAGCACGATGAGCCCGAGCCAAGGGGTCATTGCCGCTGCTaGCGCCGCTGCCGGGGCTGCTGCTCGCCTCTCCAAAGTTGCCGT +
Preference number: 5 (lower is better)
Translates to: AQEHDEPEPRGHCRC*RRCRGCCSPLQSCR
Trigger: ACGGCAACTTTGGAGAGGCGAGCAGCAGCCCCGGCAGCGGCGGCAGCAGCGGCAATGACCCCTTGGCTCGGGCTCATCGTGCTCCTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS GCA 90 bp GCTGCCCAGGAGCACGATGAGCCCGAGCCAAGGGGTCATTGCCGCTaGTGCCGCCGCTGCCGGGGCTGCTGCTCGCCTCTCCAAAGTTGC +
Preference number: 5 (lower is better)
Translates to: AAQEHDEPEPRGHCR*CRRCRGCCSPLQSC
Trigger: GCAACTTTGGAGAGGCGAGCAGCAGCCCCGGCAGCGGCGGCAGCAGCGGCAATGACCCCTTGGCTCGGGCTCATCGTGCTCCTGGGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS CCA 90 bp ACCACCTTGGCCCGGATCACGATGTCGGAGTTGCAGAAGGCGTCCTaGGGGTGGCTGGGCGAGCATGTGCACGCCTCGGCGCCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: TTLARITMSELQKAS*GWLGEHVHASAPQS
Trigger: GGACTGGGGCGCCGAGGCGTGCACATGCTCGCCCAGCCACCCCCAGGACGCCTTCTGCAACTCCGACATCGTGATCCGGGCCAAGGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp TTTGCGAAAGACCCTTCTTTGCCCAGGGCCTCCTCACCAAGGCCTAACAGATGGCGAGCCAAGGGGTCATaGCCGCTGCTGCCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: FAKDPSLPRASSPRPNRWRAKGS*PLLPPL
Trigger: CAGCGGCGGCAGCAGCGGCAATGACCCCTTGGCTCG...CCATCTGTTAGGCCTTGGTGAGGAGGCCCTGGGCAAAGAAGGGTCTTTCGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS GCA 90 bp GGGCCCATCCTCGGTACCAGCTGCAGTAGCCGCCCTTCTGCCGGATaGAGGCGTAGTGTTTGGACTGGTAGCCAGGGTAACCGAAATTGG +
Preference number: 5 (lower is better)
Translates to: GPILGTSCSSRPSAG*RRSVWTGSQGNRNW
Trigger: CCAATTTCGGTTACCCTGGCTACCAGTCCAAACACTACGCCTGCATCCGGCAGAAGGGCGGCTACTGCAGCTGGTACCGAGGATGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS TCA 90 bp AACCCAGGTGATACCGATAGTTCAGCCCCTTGCGCTGGGAGAGGGTaGGCTGGTCCCACCTCTCCACGAAGTTGCACAGCCCCGTGTACA +
Preference number: 5 (lower is better)
Translates to: NPGDTDSSAPCAGRG*AGPTSPRSCTAPCT
Trigger: TGTACACGGGGCTGTGCAACTTCGTGGAGAGGTGGGACCAGCTCACCCTCTCCCAGCGCAAGGGGCTGAACTATCGGTATCACCTGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS CCA 90 bp ACCAGCTGCAGTAGCCGCCCTTCTGCCGGATGCAGGCGTAGTGTTTaGACTGGTAGCCAGGGTAACCGAAATTGGAGAGCATGTCGGTCC +
Preference number: 5 (lower is better)
Translates to: TSCSSRPSAGCRRSV*TGSQGNRNWRACRS
Trigger: GGACCGACATGCTCTCCAATTTCGGTTACCCTGGCTACCAGTCCAAACACTACGCCTGCATCCGGCAGAAGGGCGGCTACTGCAGCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp CAAGACAGAGGTCTGGGGCATGGAAGGGTAGTGTCTCCTGGGGGCCACAGTTTGTACAAGGCAGGCAAATaGCCTCCTGACCTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: QDRGLGHGRVVSPGGHSLYKAGK*PPDLRQ
Trigger: CTGCCTGAGGTCAGGAGGCAATTTGCCTGCCTTGTA...CAAACTGTGGCCCCCAGGAGACACTACCCTTCCATGCCCCAGACCTCTGTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp AGCGAGAACTTGGAATTGTATCTCCCATGGCCCTGGATTCTTAGGAAAATCATGCTCGCCTCTCCAAAGTaGCCGTGCGCGCCGCCGGCG +
Preference number: 5 (lower is better)
Translates to: SENLELYLPWPWILRKIMLASPK*PCAPPA
Trigger: CGCCGGCGGCGCGCACGGCAACTTTGGAGAGGCGAG...CATGATTTTCCTAAGAATCCAGGGCCATGGGAGATACAATTCCAAGTTCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp CAAGACAGAGGTCTGGGGCATGGAAGGGTAGTGTCTCCTGGGGGCCACAGTTTGGAGCCAATTTGGAAGTaGTTGTCACATCCACCTCCC +
Preference number: 5 (lower is better)
Translates to: QDRGLGHGRVVSPGGHSLEPIWK*LSHPPP
Trigger: GGGAGGTGGATGTGACAACAACTTCCAAATTGGCTC...CAAACTGTGGCCCCCAGGAGACACTACCCTTCCATGCCCCAGACCTCTGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp GACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTGCGAAAGACCCTTCTTaGCCCAGGGCCTCCTCACCA +
Preference number: 5 (lower is better)
Translates to: DMLTLGSQKPNTWVPSWGAKDPS*PRASSP
Trigger: TGGTGAGGAGGCCCTGGGCAAAGAAGGGTCTTTCGC...ACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp GACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGGGTGTTCTGCCAAGCACCTaGCCTGGGCACTTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: DMLTLGSQKPNTWVPSWGVLPST*PGHLCV
Trigger: CACACACAAGTGCCCAGGCAAGGTGCTTGGCAGAAC...ACCCCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp TTTGCGAAAGACCCTTCTTTGCCCAGGGCCTCCTCACCAAGGCCTAACAGATGGGACACTGATGTCCACTaGTGGGAGGGAACTTGTGTA +
Preference number: 5 (lower is better)
Translates to: FAKDPSLPRASSPRPNRWDTDVH*WEGTCV
Trigger: TACACAAGTTCCCTCCCACAAGTGGACATCAGTGTC...CCATCTGTTAGGCCTTGGTGAGGAGGCCCTGGGCAAAGAAGGGTCTTTCGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS GCA 90 bp AGCTTAAGGCCACAGAGACTCTCGGAAGCTTCCGTATGGATGTACTaGACATGGGGCATCTTGGTGAAGCCTCGGTACATCTTCATCTGC +
Preference number: 5 (lower is better)
Translates to: SLRPQRLSEASVWMY*TWGILVKPRYIFIC
Trigger: GCAGATGAAGATGTACCGAGGCTTCACCAAGATGCCCCATGTGCAGTACATCCATACGGAAGCTTCCGAGAGTCTCTGTGGCCTTAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS CCA 90 bp AGGCCACAGAGACTCTCGGAAGCTTCCGTATGGATGTACTGCACATaGGGCATCTTGGTGAAGCCTCGGTACATCTTCATCTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: RPQRLSEASVWMYCT*GILVKPRYIFICLM
Trigger: CATCAAGCAGATGAAGATGTACCGAGGCTTCACCAAGATGCCCCATGTGCAGTACATCCATACGGAAGCTTCCGAGAGTCTCTGTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS CCA 90 bp GGATGCAGGCGTAGTGTTTGGACTGGTAGCCAGGGTAACCGAAATTaGAGAGCATGTCGGTCCAGAGACACTCGTTCTTGGAAGTCACAA +
Preference number: 5 (lower is better)
Translates to: GCRRSVWTGSQGNRN*RACRSRDTRSWKSQ
Trigger: TTGTGACTTCCAAGAACGAGTGTCTCTGGACCGACATGCTCTCCAATTTCGGTTACCCTGGCTACCAGTCCAAACACTACGCCTGCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp CTTCTAGACAGGGTTCGAGATCTCTTGTTGGTTTCTCTCCATCACTTCTGGGTTTTCTTCCCCACCACCTaGGCCCGGATCACGATGTCG +
Preference number: 5 (lower is better)
Translates to: LLDRVRDLLLVSLHHFWVFFPTT*ARITMS
Trigger: CGACATCGTGATCCGGGCCAAGGTGGTGGGGAAGAA...AACCCAGAAGTGATGGAGAGAAACCAACAAGAGATCTCGAACCCTGTCTAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp AGACTGGCTAAAGGGAAAGGCGGATGCTGGGAGAATCTAAGAAGCCTCTACCCCAGCAGGTACTGGTACTaGTTGACCTCCAGCTTAAGG +
Preference number: 5 (lower is better)
Translates to: RLAKGKGGCWENLRSLYPSRYWY*LTSSLR
Trigger: CCTTAAGCTGGAGGTCAACAAGTACCAGTACCTGCT...GGGGTAGAGGCTTCTTAGATTCTCCCAGCATCCGCCTTTCCCTTTAGCCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp TTTGCGAAAGACCCTTCTTTGCCCAGGGCCTCCTCACCAAGGCCTAACAGATGGCTTGAGTCTATCTGCTaGCTGCCTTTGACTGATCCT +
Preference number: 5 (lower is better)
Translates to: FAKDPSLPRASSPRPNRWLESIC*LPLTDP
Trigger: AGGATCAGTCAAAGGCAGCAAGCAGATAGACTCAAG...CCATCTGTTAGGCCTTGGTGAGGAGGCCCTGGGCAAAGAAGGGTCTTTCGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp GACCTTGAGGTTAAAATAAGGACAATCCCAAAACATCAAGTCTGGGCTCATCCCATCACGATGTCGGAGTaGCAGAAGGCGTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: DLEVKIRTIPKHQVWAHPITMSE*QKASWG
Trigger: CCCCCAGGACGCCTTCTGCAACTCCGACATCGTGAT...GGGATGAGCCCAGACTTGATGTTTTGGGATTGTCCTTATTTTAACCTCAAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp TTTGCGAAAGACCCTTCTTTGCCCAGGGCCTCCTCACCAAGGCCTAACAGATGGCTTTCACCTGAGCTTTaGTACAAGGCAGGCAAATTG +
Preference number: 5 (lower is better)
Translates to: FAKDPSLPRASSPRPNRWLSPEL*YKAGKL
Trigger: CAATTTGCCTGCCTTGTACAAAAGCTCAGGTGAAAG...CCATCTGTTAGGCCTTGGTGAGGAGGCCCTGGGCAAAGAAGGGTCTTTCGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp TCTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTTGACTGATCCTGAAATGCCTGTGCCCAGGCCCTaGACTACACTCTCATCTGCC +
Preference number: 5 (lower is better)
Translates to: SFTHLESICLLPLTDPEMPVPRP*TTLSSA
Trigger: GGCAGATGAGAGTGTAGTCAAGGGCCTGGGCACAGG...CATTTCAGGATCAGTCAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp TCTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTTGACTGATCCTGAAATGCACCTCTCCACGAAGTaGCACAGCCCCGTGTACATC +
Preference number: 5 (lower is better)
Translates to: SFTHLESICLLPLTDPEMHLSTK*HSPVYI
Trigger: GATGTACACGGGGCTGTGCAACTTCGTGGAGAGGTG...CATTTCAGGATCAGTCAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp GGGAGGCAGAAGAGATGCCCAAAGGAGGAAGCGAGAACTTGGAATTGTATCTCCTGTGTCCTTTATGTATaGGAGGAGAAGGGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: GRQKRCPKEEARTWNCISCVLYV*EEKGKG
Trigger: CCCTTTGCCCTTCTCCTCCAATACATAAAGGACACA...GGAGATACAATTCCAAGTTCTCGCTTCCTCCTTTGGGCATCTCTTCTGCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp GACCTTGAGGTTAAAATAAGGACAATCCCAAAACATCAAGTCTGGGCTCATCCCCTTGTGGGAGGGAACTaGTGTAGGTTGGTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: DLEVKIRTIPKHQVWAHPLVGGN*CRLVRG
Trigger: GCCCCTGACCAACCTACACAAGTTCCCTCCCACAAG...GGGATGAGCCCAGACTTGATGTTTTGGGATTGTCCTTATTTTAACCTCAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp AGTGACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGCAGAGACACTCGTTCTaGGAAGTCACAAAGCAAGGC +
Preference number: 5 (lower is better)
Translates to: SDMLTLGSQKPNTWVPSWQRHSF*EVTKQG
Trigger: GCCTTGCTTTGTGACTTCCAAGAACGAGTGTCTCTG...CCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp TCTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTTGACTGATCCTGAAATGTTCTGGCCTGGGTGCTaGCTCCAGACTCAGGAACAT +
Preference number: 5 (lower is better)
Translates to: SFTHLESICLLPLTDPEMFWPGC*LQTQEH
Trigger: ATGTTCCTGAGTCTGGAGCAAGCACCCAGGCCAGAA...CATTTCAGGATCAGTCAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp GGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTTGTACAAGGCAGCCCTCTGACATCGCTTaGCGAAAGACCCTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: GRGKTFISVFHLSFCTRQPSDIA*RKTLLC
Trigger: GCAAAGAAGGGTCTTTCGCAAAGCGATGTCAGAGGG...CTGCCTTGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp CTTCTAGACAGGGTTCGAGATCTCTTGTTGGTTTCTCTCCATCACTTCTGGGTTAGCGAGAACTTGGAATaGTATCTCCCATGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: LLDRVRDLLLVSLHHFWVSENLE*YLPWPW
Trigger: CCAGGGCCATGGGAGATACAATTCCAAGTTCTCGCT...AACCCAGAAGTGATGGAGAGAAACCAACAAGAGATCTCGAACCCTGTCTAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp GAGGCAGGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTTGTACAAGGTACTGGTACTTGTaGACCTCCAGCTTAAGGCCA +
Preference number: 5 (lower is better)
Translates to: EAGRGKTFISVFHLSFCTRYWYL*TSSLRP
Trigger: TGGCCTTAAGCTGGAGGTCAACAAGTACCAGTACCT...TGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCCTGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp AGACTGGCTAAAGGGAAAGGCGGATGCTGGGAGAATCTAAGAAGCCTCTACCCCTCTACCCAAATCTACTaGGCTATATCTGTGGATAGT +
Preference number: 5 (lower is better)
Translates to: RLAKGKGGCWENLRSLYPSTQIY*AISVDS
Trigger: ACTATCCACAGATATAGCCAAGTAGATTTGGGTAGA...GGGGTAGAGGCTTCTTAGATTCTCCCAGCATCCGCCTTTCCCTTTAGCCAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp AGTGACATGTTAACCTTAGGTAGCCAGAAGCCAAACACTTGGGTGCCATCTTGGCACCAGTCTAGCTGCTaGCCTAGAAGTATTTTCCTC +
Preference number: 5 (lower is better)
Translates to: SDMLTLGSQKPNTWVPSWHQSSC*PRSIFL
Trigger: GAGGAAAATACTTCTAGGCAAGCAGCTAGACTGGTG...CCAAGATGGCACCCAAGTGTTTGGCTTCTGGCTACCTAAGGTTAACATGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp TCCTGGTGTATAACATCTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTTGGAGCATGGAGCTTCCTaGATTGGGAGGCAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: SWCITSFTHLESICLLPLEHGAS*IGRQKR
Trigger: TCTCTTCTGCCTCCCAATCAAGGAAGCTCCATGCTC...CAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGATGTTATACACCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp GAGGTTAAAATAAGGACAATCCCAAAACATCAAGTCTGGGCTCATCCCTTCAAATGCACATGGGGCATCTaGGTGAAGCCTCGGTACATC +
Preference number: 5 (lower is better)
Translates to: EVKIRTIPKHQVWAHPFKCTWGI*VKPRYI
Trigger: GATGTACCGAGGCTTCACCAAGATGCCCCATGTGCA...TTTGAAGGGATGAGCCCAGACTTGATGTTTTGGGATTGTCCTTATTTTAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp GAGGCAGGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTTGTACACCAATTTGGAAGTTGTaGTCACATCCACCTCCCCTA +
Preference number: 5 (lower is better)
Translates to: EAGRGKTFISVFHLSFCTPIWKL*SHPPPL
Trigger: TAGGGGAGGTGGATGTGACAACAACTTCCAAATTGG...TGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCCTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp TCTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTTGACTGATCCTGAAATGCTGATCCTGAAATGGTaGGCCTTTCAGCAAGTTCCT +
Preference number: 5 (lower is better)
Translates to: SFTHLESICLLPLTDPEMLILKW*AFQQVP
Trigger: AGGAACTTGCTGAAAGGCCAACCATTTCAGGATCAG...CATTTCAGGATCAGTCAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp GAGGCAGGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTTGTACAATCTGCTTGCTGCCTTaGACTGATCCTGAAATGGTT +
Preference number: 5 (lower is better)
Translates to: EAGRGKTFISVFHLSFCTICLLP*TDPEMV
Trigger: AACCATTTCAGGATCAGTCAAAGGCAGCAAGCAGAT...TGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCCTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp GGGAGAGGAAAGACATTCATCTCAGTCTTTCACCTGAGCTTTTGTACAAGGCAGCTCCAAAGAGCCAATTaGGAAGTTGTTGTCACATCC +
Preference number: 5 (lower is better)
Translates to: GRGKTFISVFHLSFCTRQLQRAN*EVVVTS
Trigger: GGATGTGACAACAACTTCCAAATTGGCTCTTTGGAG...CTGCCTTGTACAAAAGCTCAGGTGAAAGACTGAGATGAATGTCTTTCCTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp AGCGAGAACTTGGAATTGTATCTCCCATGGCCCTGGATTCTTAGGAAAATCATGAGGGTTCGAGATCTCTaGTTGGTTTCTCTCCATCAC +
Preference number: 5 (lower is better)
Translates to: SENLELYLPWPWILRKIMRVRDL*LVSLHH
Trigger: GTGATGGAGAGAAACCAACAAGAGATCTCGAACCCT...CATGATTTTCCTAAGAATCCAGGGCCATGGGAGATACAATTCCAAGTTCTCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp TCTTTCACACACCTTGAGTCTATCTGCTTGCTGCCTTTGACTGATCCTGAAATGATTCCACTGCAGAATTaGATTCAGGAAAATGGCGGC +
Preference number: 5 (lower is better)
Translates to: SFTHLESICLLPLTDPEMIPLQN*IQENGG
Trigger: GCCGCCATTTTCCTGAATCAAATTCTGCAGTGGAAT...CATTTCAGGATCAGTCAAAGGCAGCAAGCAGATAGACTCAAGGTGTGTGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp AGCGAGAACTTGGAATTGTATCTCCCATGGCCCTGGATTCTTAGGAAAATCATGGTTCGAGATCTCTTGTaGGTTTCTCTCCATCACTTC +
Preference number: 5 (lower is better)
Translates to: SENLELYLPWPWILRKIMVRDLL*VSLHHF
Trigger: GAAGTGATGGAGAGAAACCAACAAGAGATCTCGAAC...CATGATTTTCCTAAGAATCCAGGGCCATGGGAGATACAATTCCAAGTTCTCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp TATTTTCCTCTCCATTCCACTGCAGAATTTGATTCAGGAAAATGGCGGCATGTGCAGGCACTAATTTCATaGTCATCATCTGGGAAGAGT +
Preference number: 5 (lower is better)
Translates to: YFPLHSTAEFDSGKWRHVQALIS*SSSGKS
Trigger: ACTCTTCCCAGATGATGACAATGAAATTAGTGCCTG...CACATGCCGCCATTTTCCTGAATCAAATTCTGCAGTGGAATGGAGAGGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp AGATTATATTATCACGAAGAAGAGGAATACAGGTTCCTCATTCTTTCTGGCATGAAACCCTACAACTGGTaGCAAACTCAGGCTTTCCCC +
Preference number: 5 (lower is better)
Translates to: RLYYHEEEEYRFLILSGMKPYNW*QTQAFP
Trigger: GGGGAAAGCCTGAGTTTGCAACCAGTTGTAGGGTTT...CATGCCAGAAAGAATGAGGAACCTGTATTCCTCTTCTTCGTGATAATATAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp AGATTATATTATCACGAAGAAGAGGAATACAGGTTCCTCATTCTTTCTGGCATGAGTCCAGATTGTCAATaGTCACATGCAAGACAGAGG +
Preference number: 5 (lower is better)
Translates to: RLYYHEEEEYRFLILSGMSPDCQ*SHARQR
Trigger: CCTCTGTCTTGCATGTGACAATTGACAATCTGGACT...CATGCCAGAAAGAATGAGGAACCTGTATTCCTCTTCTTCGTGATAATATAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS-3UTR CAA 90 bp AATCATGTTCAATGTCACCATCCTGCCAACCCCCACTCTGTAAAATATACATTACTTCTTCTGTTTCAATaGGCAGCTCTGTTTCCTAAA +
Preference number: 5 (lower is better)
Translates to: NHVQCHHPANPHSVKYTLLLLFQ*AALFPK
Trigger: TTTAGGAAACAGAGCTGCCAATTGAAACAGAAGAAG...TAATGTATATTTTACAGAGTGGGGGTTGGCAGGATGGTGACATTGAACATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS GCA 72 bp GGGGCAACCTTGGCCTCCGGCGCGCTGCCCTCCGAGTaGCCGGCGGGACGGGATGGGGCGCAGCGAGGCTGC +
Preference number: 6 (lower is better)
Translates to: GATLASGALPSE*PAGRDGAQRGC
Trigger: GCAGCCTCGCTGCGCCCCATCCCGTCCCGCCGGGCACTCGGAGGGCAGCGCGCCGGAGGCCAAGGTTGCCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS GCA 72 bp CCTCTCCAAAGTTGCCGTGCGCGCCGCCGGCGGGGCTaGTGCAGCCCGAGCTCGCTCGCCCGCCGGGCCGTG +
Preference number: 6 (lower is better)
Translates to: PLQSCRARRRRG*CSPSSLARRAV
Trigger: CACGGCCCGGCGGGCGAGCGAGCTCGGGCTGCAGCAGCCCCGCCGGCGGCGCGCACGGCAACTTTGGAGAGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS GCA 72 bp CGCCGCTGCCGGGGCTGCTGCTCGCCTCTCCAAAGTTaGCGTGCGCGCCGCCGGCGGGGCTGCTGCAGCCCG +
Preference number: 6 (lower is better)
Translates to: RRCRGCCSPLQS*RARRRRGCCSP
Trigger: CGGGCTGCAGCAGCCCCGCCGGCGGCGCGCACGGCAACTTTGGAGAGGCGAGCAGCAGCCCCGGCAGCGGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS CAA 72 bp CCGCCGCTGCCGGGGCTGCTGCTCGCCTCTCCAAAGTaGCCGTGCGCGCCGCCGGCGGGGCTGCTGCAGCCC +
Preference number: 6 (lower is better)
Translates to: PPLPGLLLASPK*PCAPPAGLLQP
Trigger: GGGCTGCAGCAGCCCCGCCGGCGGCGCGCACGGCAACTTTGGAGAGGCGAGCAGCAGCCCCGGCAGCGGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS GCA 72 bp CTGCCGGGGCTGCTGCTCGCCTCTCCAAAGTTGCCGTaGGCGCCGCCGGCGGGGCTGCTGCAGCCCGAGCTC +
Preference number: 6 (lower is better)
Translates to: LPGLLLASPKLP*APPAGLLQPEL
Trigger: GAGCTCGGGCTGCAGCAGCCCCGCCGGCGGCGCGCACGGCAACTTTGGAGAGGCGAGCAGCAGCCCCGGCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS GCA 72 bp AGGGGTCATTGCCGCTGCTGCCGCCGCTGCCGGGGCTaGTGCTCGCCTCTCCAAAGTTGCCGTGCGCGCCGC +
Preference number: 6 (lower is better)
Translates to: RGHCRCCRRCRG*CSPLQSCRARR
Trigger: GCGGCGCGCACGGCAACTTTGGAGAGGCGAGCAGCAGCCCCGGCAGCGGCGGCAGCAGCGGCAATGACCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS GCA 72 bp GAGCACGATGAGCCCGAGCCAAGGGGTCATTGCCGCTaGTGCCGCCGCTGCCGGGGCTGCTGCTCGCCTCTC +
Preference number: 6 (lower is better)
Translates to: EHDEPEPRGHCR*CRRCRGCCSPL
Trigger: GAGAGGCGAGCAGCAGCCCCGGCAGCGGCGGCAGCAGCGGCAATGACCCCTTGGCTCGGGCTCATCGTGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS GCA 72 bp CACGATGAGCCCGAGCCAAGGGGTCATTGCCGCTGCTaGCGCCGCTGCCGGGGCTGCTGCTCGCCTCTCCAA +
Preference number: 6 (lower is better)
Translates to: HDEPEPRGHCRC*RRCRGCCSPLQ
Trigger: TTGGAGAGGCGAGCAGCAGCCCCGGCAGCGGCGGCAGCAGCGGCAATGACCCCTTGGCTCGGGCTCATCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS CCA 72 bp GCCCGGATCACGATGTCGGAGTTGCAGAAGGCGTCCTaGGGGTGGCTGGGCGAGCATGTGCACGCCTCGGCG +
Preference number: 6 (lower is better)
Translates to: ARITMSELQKAS*GWLGEHVHASA
Trigger: CGCCGAGGCGTGCACATGCTCGCCCAGCCACCCCCAGGACGCCTTCTGCAACTCCGACATCGTGATCCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS CCA 72 bp ATCACGATGTCGGAGTTGCAGAAGGCGTCCTGGGGGTaGCTGGGCGAGCATGTGCACGCCTCGGCGCCCCAG +
Preference number: 6 (lower is better)
Translates to: ITMSELQKASWG*LGEHVHASAPQ
Trigger: CTGGGGCGCCGAGGCGTGCACATGCTCGCCCAGCCACCCCCAGGACGCCTTCTGCAACTCCGACATCGTGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS GCA 72 bp CTCGGTACCAGCTGCAGTAGCCGCCCTTCTGCCGGATaGAGGCGTAGTGTTTGGACTGGTAGCCAGGGTAAC +
Preference number: 6 (lower is better)
Translates to: LGTSCSSRPSAG*RRSVWTGSQGN
Trigger: GTTACCCTGGCTACCAGTCCAAACACTACGCCTGCATCCGGCAGAAGGGCGGCTACTGCAGCTGGTACCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS CCA 72 bp AGTAGCCGCCCTTCTGCCGGATGCAGGCGTAGTGTTTaGACTGGTAGCCAGGGTAACCGAAATTGGAGAGCA +
Preference number: 6 (lower is better)
Translates to: SSRPSAGCRRSV*TGSQGNRNWRA
Trigger: TGCTCTCCAATTTCGGTTACCCTGGCTACCAGTCCAAACACTACGCCTGCATCCGGCAGAAGGGCGGCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS GCA 72 bp ACCTCTCCACGAAGTTGCACAGCCCCGTGTACATCTTaGCATCATAGACGCGACCTGTCAGCAGGTACTGGT +
Preference number: 6 (lower is better)
Translates to: TSPRSCTAPCTS*HHRRDLSAGTG
Trigger: ACCAGTACCTGCTGACAGGTCGCGTCTATGATGGCAAGATGTACACGGGGCTGTGCAACTTCGTGGAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS GCA 72 bp CCACAGAGACTCTCGGAAGCTTCCGTATGGATGTACTaGACATGGGGCATCTTGGTGAAGCCTCGGTACATC +
Preference number: 6 (lower is better)
Translates to: PQRLSEASVWMY*TWGILVKPRYI
Trigger: GATGTACCGAGGCTTCACCAAGATGCCCCATGTGCAGTACATCCATACGGAAGCTTCCGAGAGTCTCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS CCA 72 bp CGTAGTGTTTGGACTGGTAGCCAGGGTAACCGAAATTaGAGAGCATGTCGGTCCAGAGACACTCGTTCTTGG +
Preference number: 6 (lower is better)
Translates to: RSVWTGSQGNRN*RACRSRDTRSW
Trigger: CCAAGAACGAGTGTCTCTGGACCGACATGCTCTCCAATTTCGGTTACCCTGGCTACCAGTCCAAACACTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS CCA 72 bp AATTGGAGAGCATGTCGGTCCAGAGACACTCGTTCTTaGAAGTCACAAAGCAAGGCAGGTAGTAGCAGGACT +
Preference number: 6 (lower is better)
Translates to: NWRACRSRDTRS*KSQSKAGSSRT
Trigger: AGTCCTGCTACTACCTGCCTTGCTTTGTGACTTCCAAGAACGAGTGTCTCTGGACCGACATGCTCTCCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266085.7
CDS CAA 72 bp GAAGCTTCCGTATGGATGTACTGCACATGGGGCATCTaGGTGAAGCCTCGGTACATCTTCATCTGCTTGATG +
Preference number: 6 (lower is better)
Translates to: EASVWMYCTWGI*VKPRYIFICLM
Trigger: CATCAAGCAGATGAAGATGTACCGAGGCTTCACCAAGATGCCCCATGTGCAGTACATCCATACGGAAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266085.7