RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TIMMDC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000113845

Ensembl transcript IDs: ENST00000264244.7, ENST00000463927.6, ENST00000466984.1, ENST00000469324.1, ENST00000486418.5, ENST00000492164.5, ENST00000493694.1, ENST00000494664.6, ENST00000498399.1

Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCACTTAAATTTGTCAGCAGGCTGACCAAAGAGTGGCCTGTCTGTTaGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGT +
Preference number: 1 (lower is better)
Translates to: ALKFVSRLTKEWPVC*HSSDMAAPFSSPVS
Trigger: ACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAGACAGGCCACTCTTTGGTCAGCCTGCTGACAAATTTAAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000494664.6
ENST00000498399.1
3UTR GCA 90 bp CCAGCCCATGGCTTTAGCTACCTCACTATGCTGCTTCACAAACCTTaGTCCTGTGTAAAACTATATTCTCAGTGTAGGGCAGAGAGGTCT +
Preference number: 1 (lower is better)
Translates to: PAHGFSYLTMLLHKP*SCVKLYSQCRAERS
Trigger: AGACCTCTCTGCCCTACACTGAGAATATAGTTTTACACAGGAGCAAGGTTTGTGAAGCAGCATAGTGAGGTAGCTAAAGCCATGGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494664.6
3UTR CCA 90 bp TGCCTGGCTCTGCTCAATGTATTGTTGTTTAGCATGAATAAAAGCTaGTATTCCCCCATACACCCAGCCAATGATGCCTGCTGTAGCTGC +
Preference number: 1 (lower is better)
Translates to: CLALLNVLLFSMNKS*YSPIHPANDACCSC
Trigger: GCAGCTACAGCAGGCATCATTGGCTGGGTGTATGGGGGAATACCAGCTTTTATTCATGCTAAACAACAATACATTGAGCAGAGCCAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463927.6
3UTR CCA 90 bp CAACATTTCTCAAATGCACATCTCATGGCAGCTAAGCCACATGGCTaGGATTTAAAGCCTTTAGAGCCAGCCCATGGCTTTAGCTACCTC +
Preference number: 1 (lower is better)
Translates to: QHFSNAHLMAAKPHG*DLKPLEPAHGFSYL
Trigger: GAGGTAGCTAAAGCCATGGGCTGGCTCTAAAGGCTTTAAATCCCAGCCATGTGGCTTAGCTGCCATGAGATGTGCATTTGAGAAATGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
3UTR TCA 90 bp TCTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTaGGTTTCAAGTTCAGAGCACTTTCAGTCCTTGTCTTGTTTATCT +
Preference number: 1 (lower is better)
Translates to: SVGIHRTWQLPSALQ*VSSSEHFQSLSCLS
Trigger: AGATAAACAAGACAAGGACTGAAAGTGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000498399.1
3UTR GCA 90 bp CCTCCTACAGGAGTGCACAGCATCAAACCGGTTATGATAAATTTCTaGCTGGCTCTGCTCAATGTATTGTTGTTTAGCATGAATAAAAGC +
Preference number: 1 (lower is better)
Translates to: PPTGVHSIKPVMINF*LALLNVLLFSMNKS
Trigger: GCTTTTATTCATGCTAAACAACAATACATTGAGCAGAGCCAGGCAGAAATTTATCATAACCGGTTTGATGCTGTGCACTCCTGTAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463927.6
3UTR-3UTR TCA 90 bp CCAGCAAGGCTCCAATTATGCCACCAGCCACCAGGCCACGCAGGCCTACGTTTATCACCAGAGTACTTCTaGAATGCCATCAGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: PARLQLCHQPPGHAGLRLSPEYF*NAISRP
Trigger: AGGCCTGCTGATGGCATTTCAGAAGTACTCTGGTGA...TAAACGTAGGCCTGCGTGGCCTGGTGGCTGGTGGCATAATTGGAGCCTTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486418.5
ENST00000492164.5
3UTR-3UTR CCA 90 bp CCACAGGTACCAGCACTTAAATTTGTCAGCAGGCTGACCAAAGAGTGGCCTGTCGGCATTCATCGGACATaGCAGCTCCCTTCAGCTCTC +
Preference number: 2 (lower is better)
Translates to: PQVPALKFVSRLTKEWPVGIHRT*QLPSAL
Trigger: GAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCC...GACAGGCCACTCTTTGGTCAGCCTGCTGACAAATTTAAGTGCTGGTACCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000494664.6
ENST00000498399.1
3UTR-3UTR CCA 90 bp CCACTGCCACCACAGGTACCAGCACTTAAATTTGTCAGCAGGCTGACCAAAGAGGAGTGGCCTGTCTGTTaGCATTCATCGGACATGGCA +
Preference number: 2 (lower is better)
Translates to: PLPPQVPALKFVSRLTKEEWPVC*HSSDMA
Trigger: TGCCATGTCCGATGAATGCCAACAGACAGGCCACTC...CTCTTTGGTCAGCCTGCTGACAAATTTAAGTGCTGGTACCTGTGGTGGCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000494664.6
ENST00000498399.1
3UTR-3UTR TCA 90 bp AGAGTGGCCTGTCTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCTTCTGTTTTCTTTCCTaGACAGTCTCACCAGAGTAC +
Preference number: 2 (lower is better)
Translates to: RVACLLAFIGHGSSLQLSFCFLS*TVSPEY
Trigger: GTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAA...GGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAGACAGGCCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000498399.1
3UTR-3UTR CCA 90 bp TACACTCACACTGCTTCCAGGACCCAAGGGTTTCACAGACCATTTGCCTACCTGAGGCTGACCAAAGAGTaGCCTGTCTGTTGGCATTCA +
Preference number: 2 (lower is better)
Translates to: YTHTASRTQGFHRPFAYLRLTKE*PVCWHS
Trigger: TGAATGCCAACAGACAGGCCACTCTTTGGTCAGCCT...CAGGTAGGCAAATGGTCTGTGAAACCCTTGGGTCCTGGAAGCAGTGTGAGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
3UTR-3UTR TCA 90 bp ATTATGCCACCAGCCACCAGGCCACGCAGGCCTACGTTTATCCTAAAAAGACTTTCACCAGAGTACTTCTaGAATGCCATCAGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: IMPPATRPRRPTFILKRLSPEYF*NAISRP
Trigger: AGGCCTGCTGATGGCATTTCAGAAGTACTCTGGTGA...AAGTCTTTTTAGGATAAACGTAGGCCTGCGTGGCCTGGTGGCTGGTGGCATAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492164.5
3UTR-3UTR TCA 90 bp ACTTCTGAAATGCCATCAGCAGGCCTCCTACAGGAGTGCACAGCATCAAACCGGATTAGCAAGGTCCTTTaGAATTCTCTGCTGTTCACC +
Preference number: 2 (lower is better)
Translates to: TSEMPSAGLLQECTASNRISKVL*NSLLFT
Trigger: GGTGAACAGCAGAGAATTTCAAAGGACCTTGCTAAT...CCGGTTTGATGCTGTGCACTCCTGTAGGAGGCCTGCTGATGGCATTTCAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463927.6
3UTR-3UTR GCA 90 bp CTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGACCAGCCAATGATGCCTaGTGTAGCTGCCGTCTTACA +
Preference number: 2 (lower is better)
Translates to: LMECLSILLFSFLNSLTRPANDA*CSCRLT
Trigger: TGTAAGACGGCAGCTACAGCAGGCATCATTGGCTGG...TCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTCCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463927.6
3UTR-3UTR CCA 90 bp CTTCACAAACCTTGCTCCTGTGTAAAACTATATTCTCAGTGTAGGGCAGAGAGGGGCATTCATCGGACATaGCAGCTCCCTTCAGCTCTC +
Preference number: 2 (lower is better)
Translates to: LHKPCSCVKLYSQCRAERGIHRT*QLPSAL
Trigger: GAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCC...CCTCTCTGCCCTACACTGAGAATATAGTTTTACACAGGAGCAAGGTTTGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494664.6
3UTR-3UTR GCA 90 bp CTTCCAGTTTTAGCTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAAGGCCTCCTACAGGAGTaGACAGCATCAAACCGGTTA +
Preference number: 2 (lower is better)
Translates to: LPVLAHGVPFDPSVFFPEGLLQE*TASNRL
Trigger: TAACCGGTTTGATGCTGTGCACTCCTGTAGGAGGCC...TTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463927.6
3UTR-3UTR GCA 90 bp CTGCCTTTCCACTCTTCCAGTTTTAGCTCATGGAGTGCCTTTCGATCCTTCTGTATTTTCTCAGGGAGGTaGTCAGTAACTTGTAGTCTG +
Preference number: 2 (lower is better)
Translates to: LPFHSSSFSSWSAFRSFCIFSGR*SVTCSL
Trigger: CAGACTACAAGTTACTGAGCACCTCCCTGAGAAAAT...ACAGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGAAGAGTGGAAAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000498399.1
3UTR-3UTR GCA 90 bp ACCAGAGTACTTCTGAAATGCCATCAGCAGGCCTCCTACAGGAGTGCACAGCATATTTCTGCCTGGCTCTaGTCAATGTATTGTTGTTTA +
Preference number: 2 (lower is better)
Translates to: TRVLLKCHQQASYRSAQHISAWL*SMYCCL
Trigger: TAAACAACAATACATTGAGCAGAGCCAGGCAGAAAT...ATGCTGTGCACTCCTGTAGGAGGCCTGCTGATGGCATTTCAGAAGTACTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463927.6
3UTR-3UTR TCA 90 bp CAGCATCAAACCGGTTATGATAAATTTCTGCCTGGCTCTGCTCAATGTATTGTTTCACCAGAGTACTTCTaGAATGCCATCAGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: QHQTGYDKFLPGSAQCIVSPEYF*NAISRP
Trigger: AGGCCTGCTGATGGCATTTCAGAAGTACTCTGGTGA...AACAATACATTGAGCAGAGCCAGGCAGAAATTTATCATAACCGGTTTGATGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463927.6
3UTR-3UTR GCA 90 bp TTCCACTCTTCCAGTTTTAGCTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTGATGCCTGCTGTAGCTaGCGTCTTACAGATATTAGC +
Preference number: 2 (lower is better)
Translates to: FHSSSFSSWSAFRSFCFLDACCS*RLTDIS
Trigger: GCTAATATCTGTAAGACGGCAGCTACAGCAGGCATC...AAGAAAACAGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGAAGAGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463927.6
3UTR CAA 90 bp AAACCGGTTATGATAAATTTCTGCCTGGCTCTGCTCAATGTATTGTaGTTTAGCATGAATAAAAGCTGGTATTCCCCCATACACCCAGCC +
Preference number: 2 (lower is better)
Translates to: KPVMINFCLALLNVL*FSMNKSWYSPIHPA
Trigger: GGCTGGGTGTATGGGGGAATACCAGCTTTTATTCATGCTAAACAACAATACATTGAGCAGAGCCAGGCAGAAATTTATCATAACCGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463927.6
3UTR-3UTR TCA 90 bp ACTCTTCCAGTTTTAGCTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTTTCTGTTTTCTTTCCTaGACAGTCTCACCAGAGTAC +
Preference number: 2 (lower is better)
Translates to: TLPVLAHGVPFDPSVFFPFCFLS*TVSPEY
Trigger: GTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAA...AGGAAAGAAAACAGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000486418.5
ENST00000492164.5
ENST00000498399.1
3UTR-3UTR GCA 90 bp CTTCCAGTTTTAGCTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAAATTTTCTCAGGGAGGTaGTCAGTAACTTGTAGTCTG +
Preference number: 2 (lower is better)
Translates to: LPVLAHGVPFDPSVFFPEIFSGR*SVTCSL
Trigger: CAGACTACAAGTTACTGAGCACCTCCCTGAGAAAAT...TTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000498399.1
3UTR CAA 90 bp ATCAAACCGGTTATGATAAATTTCTGCCTGGCTCTGCTCAATGTATaGTTGTTTAGCATGAATAAAAGCTGGTATTCCCCCATACACCCA +
Preference number: 2 (lower is better)
Translates to: IKPVMINFCLALLNV*LFSMNKSWYSPIHP
Trigger: TGGGTGTATGGGGGAATACCAGCTTTTATTCATGCTAAACAACAATACATTGAGCAGAGCCAGGCAGAAATTTATCATAACCGGTTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463927.6
3UTR-3UTR CCA 90 bp ATAAATTTCTGCCTGGCTCTGCTCAATGTATTGTTGTTTAGCATGAATAAAAGCTCCAGTTTTAGCTCATaGAGTGCCTTTCGATCCTTC +
Preference number: 2 (lower is better)
Translates to: INFCLALLNVLLFSMNKSSSFSS*SAFRSF
Trigger: GAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGA...GCTTTTATTCATGCTAAACAACAATACATTGAGCAGAGCCAGGCAGAAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463927.6
3UTR CCA 72 bp TTTGTCAGCAGGCTGACCAAAGAGTGGCCTGTCTGTTaGCATTCATCGGACATGGCAGCTCCCTTCAGCTCT +
Preference number: 3 (lower is better)
Translates to: FVSRLTKEWPVC*HSSDMAAPFSS
Trigger: AGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAGACAGGCCACTCTTTGGTCAGCCTGCTGACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000494664.6
ENST00000498399.1
3UTR GCA 72 bp AGCTGGTATTCCCCCATACACCCAGCCAATGATGCCTaGTGTAGCTGCCGTCTTACAGATATTAGCAAGGTC +
Preference number: 3 (lower is better)
Translates to: SWYSPIHPANDA*CSCRLTDISKV
Trigger: GACCTTGCTAATATCTGTAAGACGGCAGCTACAGCAGGCATCATTGGCTGGGTGTATGGGGGAATACCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463927.6
3UTR CCA 72 bp TCAAATGCACATCTCATGGCAGCTAAGCCACATGGCTaGGATTTAAAGCCTTTAGAGCCAGCCCATGGCTTT +
Preference number: 3 (lower is better)
Translates to: SNAHLMAAKPHG*DLKPLEPAHGF
Trigger: AAAGCCATGGGCTGGCTCTAAAGGCTTTAAATCCCAGCCATGTGGCTTAGCTGCCATGAGATGTGCATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
3UTR GCA 72 bp GGCTTTAGCTACCTCACTATGCTGCTTCACAAACCTTaGTCCTGTGTAAAACTATATTCTCAGTGTAGGGCA +
Preference number: 3 (lower is better)
Translates to: GFSYLTMLLHKP*SCVKLYSQCRA
Trigger: TGCCCTACACTGAGAATATAGTTTTACACAGGAGCAAGGTTTGTGAAGCAGCATAGTGAGGTAGCTAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494664.6
3UTR CCA 72 bp CTGCTCAATGTATTGTTGTTTAGCATGAATAAAAGCTaGTATTCCCCCATACACCCAGCCAATGATGCCTGC +
Preference number: 3 (lower is better)
Translates to: LLNVLLFSMNKS*YSPIHPANDAC
Trigger: GCAGGCATCATTGGCTGGGTGTATGGGGGAATACCAGCTTTTATTCATGCTAAACAACAATACATTGAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463927.6
3UTR GCA 72 bp GGAGTGCACAGCATCAAACCGGTTATGATAAATTTCTaGCTGGCTCTGCTCAATGTATTGTTGTTTAGCATG +
Preference number: 3 (lower is better)
Translates to: GVHSIKPVMINF*LALLNVLLFSM
Trigger: CATGCTAAACAACAATACATTGAGCAGAGCCAGGCAGAAATTTATCATAACCGGTTTGATGCTGTGCACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463927.6
3UTR TCA 72 bp GGACGCAACTTAAGCTGGGATAATCACATTATCATCTaGAAATCTGGAGTTGAACAGCAAAAGAAGACAACA +
Preference number: 3 (lower is better)
Translates to: GRNLSWDNHIII*KSGVEQQKKTT
Trigger: TGTTGTCTTCTTTTGCTGTTCAACTCCAGATTTTCAGATGATAATGTGATTATCCCAGCTTAAGTTGCGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR GCA 90 bp AGTGCCCAGCAAGGCTCCAATTATGCCACCAGCCACCAGGCCACGCAGGCCTACGAGAAAGCTCCGCGGTaGCGGTGGCGGCACCTCCAT +
Preference number: 4 (lower is better)
Translates to: SAQQGSNYATSHQATQAYEKAPR*RWRHLH
Trigger: ATGGAGGTGCCGCCACCGGCACCGCGGAGCTTTCTC...GTAGGCCTGCGTGGCCTGGTGGCTGGTGGCATAATTGGAGCCTTGCTGGGCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486418.5
ENST00000492164.5
CDS-3UTR CCA 90 bp GCCCAGCAAGGCTCCAATTATGCCACCAGCCACCAGGCCACGCAGGCCTACGTTGTGGCGGCACCTCCATaGCCTTCTCTCGACCTACGG +
Preference number: 4 (lower is better)
Translates to: AQQGSNYATSHQATQAYVVAAPP*PSLDLR
Trigger: CCGTAGGTCGAGAGAAGGCCATGGAGGTGCCGCCAC...AACGTAGGCCTGCGTGGCCTGGTGGCTGGTGGCATAATTGGAGCCTTGCTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486418.5
ENST00000492164.5
CDS-3UTR CCA 90 bp AGTGCCCAGCAAGGCTCCAATTATGCCACCAGCCACCAGGCCACGCAGGCCTACGTGGCGGCACCTCCATaGCCTTCTCTCGACCTACGG +
Preference number: 4 (lower is better)
Translates to: SAQQGSNYATSHQATQAYVAAPP*PSLDLR
Trigger: CCGTAGGTCGAGAGAAGGCCATGGAGGTGCCGCCAC...GTAGGCCTGCGTGGCCTGGTGGCTGGTGGCATAATTGGAGCCTTGCTGGGCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486418.5
ENST00000492164.5
CDS-3UTR CCA 90 bp GGCCTCCTACAGGAGTGCCCAGCAAGGCTCCAATTATGCCACCAGCCACCAGGCCGGGTAATAGGGCTCTaGGACGTAGGGAAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: GLLQECPARLQLCHQPPGRVIGL*DVGKPL
Trigger: AAGCGGCTTCCCTACGTCCCAGAGCCCTATTACCCG...GCCTGGTGGCTGGTGGCATAATTGGAGCCTTGCTGGGCACTCCTGTAGGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486418.5
ENST00000492164.5
CDS-3UTR CCA 90 bp CCAATTATGCCACCAGCCACCAGGCCACGCAGGCCTACGTTTATCCTAAAAAGAGCTCCGCGGTGCCGGTaGCGGCACCTCCATGGCCTT +
Preference number: 4 (lower is better)
Translates to: PIMPPATRPRRPTFILKRAPRCR*RHLHGL
Trigger: AAGGCCATGGAGGTGCCGCCACCGGCACCGCGGAGC...TCTTTTTAGGATAAACGTAGGCCTGCGTGGCCTGGTGGCTGGTGGCATAATTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492164.5
CDS-3UTR CCA 90 bp CTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGCTCCGCGGTGCCGGTaGCGGCACCTCCATGGCCTT +
Preference number: 4 (lower is better)
Translates to: LLAFIGHGSSLQLSSEFQAPRCR*RHLHGL
Trigger: AAGGCCATGGAGGTGCCGCCACCGGCACCGCGGAGC...TTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
CDS-3UTR TCA 90 bp GCCTGTCTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGGCCAGCCATAACGAATaGAGCCTCGTGTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: ACLLAFIGHGSSLQLSSEASHNE*SLVWQH
Trigger: GTGCTGCCACACGAGGCTTCATTCGTTATGGCTGGC...CTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAGACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000494664.6
CDS-3UTR GCA 90 bp ACCAGCCACCAGGCCACGCAGGCCTACGTTTATCCTAAAAAGACTTCCCGTGACCCCAGGTTAACCCTCTaGCAGAGGGCTCGACACCCA +
Preference number: 4 (lower is better)
Translates to: TSHQATQAYVYPKKTSRDPRLTL*QRARHP
Trigger: TGGGTGTCGAGCCCTCTGGCAGAGGGTTAACCTGGG...GTCACGGGAAGTCTTTTTAGGATAAACGTAGGCCTGCGTGGCCTGGTGGCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492164.5
CDS-3UTR GCA 90 bp TCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGCACTTGAGAAAGCTCCGCGGTaGCGGTGGCGGCACCTCCAT +
Preference number: 4 (lower is better)
Translates to: SDMAAPFSSPVSFKFRALEKAPR*RWRHLH
Trigger: ATGGAGGTGCCGCCACCGGCACCGCGGAGCTTTCTC...AAGTGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
CDS-3UTR GCA 90 bp GCTTCCAGGACCCAAGGGTTTCACAGACCATTTGCCTACCTGGTTCTTTCCTCTGAGAAAGCTCCGCGGTaGCGGTGGCGGCACCTCCAT +
Preference number: 4 (lower is better)
Translates to: ASRTQGFHRPFAYLVLSSEKAPR*RWRHLH
Trigger: ATGGAGGTGCCGCCACCGGCACCGCGGAGCTTTCTC...AGAGGAAAGAACCAGGTAGGCAAATGGTCTGTGAAACCCTTGGGTCCTGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR GCA 90 bp GTGCCCAGCAAGGCTCCAATTATGCCACCAGCCACCAGGCCACGCAGGCCTACGAGAGTACTTCTGAAATaGCATCAGCAGGCCTCCTAC +
Preference number: 4 (lower is better)
Translates to: VPSKAPIMPPATRPRRPTRVLLK*HQQASY
Trigger: GTAGGAGGCCTGCTGATGGCATTTCAGAAGTACTCT...CGTAGGCCTGCGTGGCCTGGTGGCTGGTGGCATAATTGGAGCCTTGCTGGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486418.5
ENST00000492164.5
CDS-3UTR TCA 90 bp GCAGGCCTCCTACAGGAGTGCCCAGCAAGGCTCCAATTATGCCACCAGCCACCAACCTACGGACAAACTTaGGCGCTCAGGACTTCAAGT +
Preference number: 4 (lower is better)
Translates to: AGLLQECPARLQLCHQPPTYGQT*ALRTSS
Trigger: ACTTGAAGTCCTGAGCGCTCAAGTTTGTCCGTAGGT...TGGTGGCTGGTGGCATAATTGGAGCCTTGCTGGGCACTCCTGTAGGAGGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486418.5
ENST00000492164.5
CDS-3UTR TCA 90 bp CCCAGCAAGGCTCCAATTATGCCACCAGCCACCAGGCCACGCAGGCCTACGTTTACCTACGGACAAACTTaGGCGCTCAGGACTTCAAGT +
Preference number: 4 (lower is better)
Translates to: PSKAPIMPPATRPRRPTFTYGQT*ALRTSS
Trigger: ACTTGAAGTCCTGAGCGCTCAAGTTTGTCCGTAGGT...AAACGTAGGCCTGCGTGGCCTGGTGGCTGGTGGCATAATTGGAGCCTTGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486418.5
ENST00000492164.5
CDS-3UTR GCA 90 bp CATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGAGAAAGCTCCGCGGTaGCGGTGGCGGCACCTCCAT +
Preference number: 4 (lower is better)
Translates to: HSSDMAAPFSSPVSFKFREKAPR*RWRHLH
Trigger: ATGGAGGTGCCGCCACCGGCACCGCGGAGCTTTCTC...TCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
CDS-3UTR GCA 90 bp CAGCAAGGCTCCAATTATGCCACCAGCCACCAGGCCACGCAGGCCTACGTTTATGGCCTCCTACAGGAGTaGCCAGCAAGGCTCCAATTA +
Preference number: 4 (lower is better)
Translates to: QQGSNYATSHQATQAYVYGLLQE*PARLQL
Trigger: TAATTGGAGCCTTGCTGGGCACTCCTGTAGGAGGCC...ATAAACGTAGGCCTGCGTGGCCTGGTGGCTGGTGGCATAATTGGAGCCTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486418.5
ENST00000492164.5
CDS-3UTR GCA 90 bp CACCAGAGTACTTCTGAAATGCCATCAGCAGGCCTCCTACAGGAGTGCCCAGCATCCCGTGACAGTCTTTaGCAAACAGCTCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: HQSTSEMPSAGLLQECPASRDSL*QTAPGG
Trigger: GCCTCCGGGAGCTGTTTGGCAAAGACTGTCACGGGA...TGCTGGGCACTCCTGTAGGAGGCCTGCTGATGGCATTTCAGAAGTACTCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486418.5
CDS-3UTR GCA 90 bp GCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGCCCAGGTTAACCCTCTaGCAGAGGGCTCGACACCCA +
Preference number: 4 (lower is better)
Translates to: AFIGHGSSLQLSSEFQVQPRLTL*QRARHP
Trigger: TGGGTGTCGAGCCCTCTGGCAGAGGGTTAACCTGGG...CTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
CDS-3UTR GCA 90 bp CAGGCCACGCAGGCCTACGTTTATCCTAAAAAGACTTCCCGTGACAGCTCCTGCGGCCTCCTACAGGAGTaGCCAGCAAGGCTCCAATTA +
Preference number: 4 (lower is better)
Translates to: QATQAYVYPKKTSRDSSCGLLQE*PARLQL
Trigger: TAATTGGAGCCTTGCTGGGCACTCCTGTAGGAGGCC...GCAGGAGCTGTCACGGGAAGTCTTTTTAGGATAAACGTAGGCCTGCGTGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492164.5
CDS-3UTR GCA 90 bp GCAGGCCTCCTACAGGAGTGCCCAGCAAGGCTCCAATTATGCCACCAGCCACCATGTGGCAGCACGATGTaGAGATTGTCTTTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: AGLLQECPARLQLCHQPPCGSTM*RLSLPN
Trigger: GTTTGGCAAAGACAATCTGCACATCGTGCTGCCACA...TGGTGGCTGGTGGCATAATTGGAGCCTTGCTGGGCACTCCTGTAGGAGGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492164.5
CDS-3UTR CCA 90 bp CATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGTGGCGGCACCTCCATaGCCTTCTCTCGACCTACGG +
Preference number: 4 (lower is better)
Translates to: HSSDMAAPFSSPVSFKFRVAAPP*PSLDLR
Trigger: CCGTAGGTCGAGAGAAGGCCATGGAGGTGCCGCCAC...TCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
CDS-3UTR CCA 90 bp ATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTAGCTCCGCGGTGCCGGTaGCGGCACCTCCATGGCCTT +
Preference number: 4 (lower is better)
Translates to: MECLSILLFSFLNSLTRVAPRCR*RHLHGL
Trigger: AAGGCCATGGAGGTGCCGCCACCGGCACCGCGGAGC...TACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000486418.5
ENST00000492164.5
CDS-3UTR CCA 90 bp CTCACACTGCTTCCAGGACCCAAGGGTTTCACAGACCATTTGCCTACCTGGTTCCGGGTAATAGGGCTCTaGGACGTAGGGAAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: LTLLPGPKGFTDHLPTWFRVIGL*DVGKPL
Trigger: AAGCGGCTTCCCTACGTCCCAGAGCCCTATTACCCG...GAACCAGGTAGGCAAATGGTCTGTGAAACCCTTGGGTCCTGGAAGCAGTGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR CCA 90 bp GGCCTCCTACAGGAGTGCCCAGCAAGGCTCCAATTATGCCACCAGCCACCAGGCTCCAGTTTTAGCTCATaGAGTGCCTTTCGATCCTTC +
Preference number: 4 (lower is better)
Translates to: GLLQECPARLQLCHQPPGSSFSS*SAFRSF
Trigger: GAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGA...GCCTGGTGGCTGGTGGCATAATTGGAGCCTTGCTGGGCACTCCTGTAGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486418.5
ENST00000492164.5
CDS-3UTR TCA 90 bp CACCAGAGTACTTCTGAAATGCCATCAGCAGGCCTCCTACAGGAGTGCCCAGCAGAGAATCCGTGCATTTaGCCCAGGTTAACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: HQSTSEMPSAGLLQECPAENPCI*PRLTLC
Trigger: GCAGAGGGTTAACCTGGGTCAAATGCACGGATTCTC...TGCTGGGCACTCCTGTAGGAGGCCTGCTGATGGCATTTCAGAAGTACTCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486418.5
ENST00000492164.5
CDS-3UTR TCA 90 bp AGAGTGGCCTGTCTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCACCTACGGACAAACTTaGGCGCTCAGGACTTCAAGT +
Preference number: 4 (lower is better)
Translates to: RVACLLAFIGHGSSLQLSTYGQT*ALRTSS
Trigger: ACTTGAAGTCCTGAGCGCTCAAGTTTGTCCGTAGGT...GGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAGACAGGCCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000494664.6
CDS-3UTR TCA 90 bp GAGTGGCCTGTCTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAACCTACGGACAAACTTaGGCGCTCAGGACTTCAAGT +
Preference number: 4 (lower is better)
Translates to: EWPVCWHSSDMAAPFSSPTYGQT*ALRTSS
Trigger: ACTTGAAGTCCTGAGCGCTCAAGTTTGTCCGTAGGT...TGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAGACAGGCCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000494664.6
CDS-3UTR TCA 90 bp GAGTGGCCTGTCTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCATCACCAGAGTACTTCTaGAATGCCATCAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: EWPVCWHSSDMAAPFSSPSPEYF*NAISRP
Trigger: AGGCCTGCTGATGGCATTTCAGAAGTACTCTGGTGA...TGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAGACAGGCCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000494664.6
ENST00000498399.1
CDS-3UTR GCA 90 bp CCAGCAAGGCTCCAATTATGCCACCAGCCACCAGGCCACGCAGGCCTACGTTTAAGAGTACTTCTGAAATaGCATCAGCAGGCCTCCTAC +
Preference number: 4 (lower is better)
Translates to: PARLQLCHQPPGHAGLRLRVLLK*HQQASY
Trigger: GTAGGAGGCCTGCTGATGGCATTTCAGAAGTACTCT...TAAACGTAGGCCTGCGTGGCCTGGTGGCTGGTGGCATAATTGGAGCCTTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486418.5
ENST00000492164.5
CDS-3UTR CCA 90 bp ACTCTTCCAGTTTTAGCTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGCTCCGCGGTGCCGGTaGCGGCACCTCCATGGCCTT +
Preference number: 4 (lower is better)
Translates to: TLPVLAHGVPFDPSVFFPAPRCR*RHLHGL
Trigger: AAGGCCATGGAGGTGCCGCCACCGGCACCGCGGAGC...AGGAAAGAAAACAGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000486418.5
ENST00000492164.5
CDS-3UTR CCA 90 bp GATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACTTCTGAAATGCCAGCTCCGCGGTGCCGGTaGCGGCACCTCCATGGCCTT +
Preference number: 4 (lower is better)
Translates to: DPSVFFPEQSHQSTSEMPAPRCR*RHLHGL
Trigger: AAGGCCATGGAGGTGCCGCCACCGGCACCGCGGAGC...TGGCATTTCAGAAGTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000486418.5
ENST00000492164.5
CDS-3UTR CCA 90 bp GCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGCGGGTAATAGGGCTCTaGGACGTAGGGAAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: AFIGHGSSLQLSSEFQVQRVIGL*DVGKPL
Trigger: AAGCGGCTTCCCTACGTCCCAGAGCCCTATTACCCG...CTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
ENST00000498399.1
CDS-3UTR CCA 90 bp TCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGCACTTCGGGTAATAGGGCTCTaGGACGTAGGGAAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: SDMAAPFSSPVSFKFRALRVIGL*DVGKPL
Trigger: AAGCGGCTTCCCTACGTCCCAGAGCCCTATTACCCG...AAGTGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
ENST00000498399.1
3UTR CAA 72 bp ATTTGTCAGCAGGCTGACCAAAGAGTGGCCTGTCTGTaGGCATTCATCGGACATGGCAGCTCCCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: ICQQADQRVACL*AFIGHGSSLQL
Trigger: GAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAGACAGGCCACTCTTTGGTCAGCCTGCTGACAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000494664.6
ENST00000498399.1
CDS-3UTR GCA 90 bp TTAGCTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACGAGAAAGCTCCGCGGTaGCGGTGGCGGCACCTCCAT +
Preference number: 4 (lower is better)
Translates to: LAHGVPFDPSVFFPEQSHEKAPR*RWRHLH
Trigger: ATGGAGGTGCCGCCACCGGCACCGCGGAGCTTTCTC...GTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTCCATGAGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000486418.5
ENST00000492164.5
CDS-3UTR GCA 90 bp GAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACTTGAGAAAGCTCCGCGGTaGCGGTGGCGGCACCTCCAT +
Preference number: 4 (lower is better)
Translates to: ECLSILLFSFLNSLTRVLEKAPR*RWRHLH
Trigger: ATGGAGGTGCCGCCACCGGCACCGCGGAGCTTTCTC...AAGTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000486418.5
ENST00000492164.5
CDS-3UTR GCA 90 bp GCCTGTCTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGAGAGTACTTCTGAAATaGCATCAGCAGGCCTCCTAC +
Preference number: 4 (lower is better)
Translates to: ACLLAFIGHGSSLQLSSERVLLK*HQQASY
Trigger: GTAGGAGGCCTGCTGATGGCATTTCAGAAGTACTCT...CTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAGACAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000494664.6
ENST00000498399.1
CDS-3UTR GCA 90 bp TCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGCACTTACAAGAGCAAGCCACTaGCACCACAGGTACCAGCAC +
Preference number: 4 (lower is better)
Translates to: SDMAAPFSSPVSFKFRALTRASH*HHRYQH
Trigger: GTGCTGGTACCTGTGGTGGCAGTGGCTTGCTCTTGT...AAGTGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000494664.6
ENST00000498399.1
CDS-3UTR GCA 90 bp TTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGCCTACAGGAGTGTCTTTaGCAAACAGCTCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: FIGHGSSLQLSSEFQVQSLQECL*QTAPGG
Trigger: GCCTCCGGGAGCTGTTTGGCAAAGACACTCCTGTAG...GCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493694.1
CDS-3UTR CCA 90 bp GCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGGGCATTCATCGGACATaGCAGCTCCCTTCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: AFIGHGSSLQLSSEFQVQGIHRT*QLPSAL
Trigger: GAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCC...CTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
ENST00000498399.1
CDS-3UTR CCA 90 bp CTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGGCATTCATCGGACATaGCAGCTCCCTTCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: LLAFIGHGSSLQLSSEFQGIHRT*QLPSAL
Trigger: GAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCC...TTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
ENST00000498399.1
CDS-3UTR CCA 90 bp CTCACACTGCTTCCAGGACCCAAGGGTTTCACAGACCATTTGCCTACCTGGTTCGAGTGGCCTGTCTGTTaGCATTCATCGGACATGGCA +
Preference number: 4 (lower is better)
Translates to: LTLLPGPKGFTDHLPTWFEWPVC*HSSDMA
Trigger: TGCCATGTCCGATGAATGCCAACAGACAGGCCACTC...GAACCAGGTAGGCAAATGGTCTGTGAAACCCTTGGGTCCTGGAAGCAGTGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR CCA 90 bp CCTGTCTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTAGGCTGACCAAAGAGTaGCCTGTCTGTTGGCATTCA +
Preference number: 4 (lower is better)
Translates to: PVCWHSSDMAAPFSSPVSRLTKE*PVCWHS
Trigger: TGAATGCCAACAGACAGGCCACTCTTTGGTCAGCCT...ACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000494664.6
ENST00000498399.1
CDS-3UTR CCA 90 bp ATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGCACTTCCCCGGCCTCGCTTTaGAGTCCTTGGAAATACGAC +
Preference number: 4 (lower is better)
Translates to: IGHGSSLQLSSEFQVQSTSPASL*SPWKYD
Trigger: GTCGTATTTCCAAGGACTCCAAAGCGAGGCCGGGGA...AGTGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493694.1
ENST00000494664.6
CDS-3UTR CCA 90 bp CCACTGCCACCACAGGTACCAGCACTTAAATTTGTCAGCAGGCTGACCAAAGAGTCCCCGGCCTCGCTTTaGAGTCCTTGGAAATACGAC +
Preference number: 4 (lower is better)
Translates to: PLPPQVPALKFVSRLTKESPASL*SPWKYD
Trigger: GTCGTATTTCCAAGGACTCCAAAGCGAGGCCGGGGA...CTCTTTGGTCAGCCTGCTGACAAATTTAAGTGCTGGTACCTGTGGTGGCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR TCA 90 bp CTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGAGAATCCGTGCATTTaGCCCAGGTTAACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LLAFIGHGSSLQLSSEFQENPCI*PRLTLC
Trigger: GCAGAGGGTTAACCTGGGTCAAATGCACGGATTCTC...TTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
CDS-3UTR TCA 90 bp GCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGGAGAATCCGTGCATTTaGCCCAGGTTAACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: AFIGHGSSLQLSSEFQVQENPCI*PRLTLC
Trigger: GCAGAGGGTTAACCTGGGTCAAATGCACGGATTCTC...CTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
CDS-3UTR TCA 90 bp CTCACACTGCTTCCAGGACCCAAGGGTTTCACAGACCATTTGCCTACCTGGTTCCGTAACTGTACGAGGTaGGAATCCGTGCATTTGACC +
Preference number: 4 (lower is better)
Translates to: LTLLPGPKGFTDHLPTWFRNCTR*ESVHLT
Trigger: GGTCAAATGCACGGATTCTCACCTCGTACAGTTACG...GAACCAGGTAGGCAAATGGTCTGTGAAACCCTTGGGTCCTGGAAGCAGTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR GCA 90 bp GCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGTCTGCTGTTCATCTTTaGCAAACAGCTCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: AFIGHGSSLQLSSEFQVQSAVHL*QTAPGG
Trigger: GCCTCCGGGAGCTGTTTGGCAAAGATGAACAGCAGA...CTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000494664.6
CDS-3UTR GCA 90 bp CACACTGCTTCCAGGACCCAAGGGTTTCACAGACCATTTGCCTACCTGGTTCTTCCAGCCAATGATGCCTaGTGTAGCTGCCGTCTTACA +
Preference number: 4 (lower is better)
Translates to: HTASRTQGFHRPFAYLVLPANDA*CSCRLT
Trigger: TGTAAGACGGCAGCTACAGCAGGCATCATTGGCTGG...AAGAACCAGGTAGGCAAATGGTCTGTGAAACCCTTGGGTCCTGGAAGCAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR GCA 90 bp TTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTACAAGAGCAAGCCACTaGCACCACAGGTACCAGCAC +
Preference number: 4 (lower is better)
Translates to: LAFIGHGSSLQLSSEFQVTRASH*HHRYQH
Trigger: GTGCTGGTACCTGTGGTGGCAGTGGCTTGCTCTTGT...AACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000494664.6
ENST00000498399.1
CDS-3UTR GCA 90 bp CCTGTCTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTCATTTACACTCACACTaGTTCCAGGACCCAAGGGTT +
Preference number: 4 (lower is better)
Translates to: PVCWHSSDMAAPFSSPVSHLHSH*FQDPRV
Trigger: AACCCTTGGGTCCTGGAAGCAGTGTGAGTGTAAATG...ACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR GCA 90 bp CCTGTCTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTGCTACCTCACTATGCTaGTTCACAAACCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PVCWHSSDMAAPFSSPVSATSLC*FTNLAP
Trigger: AGGAGCAAGGTTTGTGAAGCAGCATAGTGAGGTAGC...ACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR CCA 90 bp CCAGTTTTAGCTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGGTGGCGGCACCTCCATaGCCTTCTCTCGACCTACGG +
Preference number: 4 (lower is better)
Translates to: PVLAHGVPFDPSVFFPEQVAAPP*PSLDLR
Trigger: CCGTAGGTCGAGAGAAGGCCATGGAGGTGCCGCCAC...CTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000486418.5
ENST00000492164.5
CDS-3UTR CCA 90 bp CCTACAGGAGTGCACAGCATCAAACCGGTTATGATAAATTTCTGCCTGGCTCTGCGGGTAATAGGGCTCTaGGACGTAGGGAAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: PTGVHSIKPVMINFCLALRVIGL*DVGKPL
Trigger: AAGCGGCTTCCCTACGTCCCAGAGCCCTATTACCCG...CAGAGCCAGGCAGAAATTTATCATAACCGGTTTGATGCTGTGCACTCCTGTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463927.6
CDS-3UTR CCA 90 bp CTGCCTTTCCACTCTTCCAGTTTTAGCTCATGGAGTGCCTTTCGATCCTTCTGTCGGGTAATAGGGCTCTaGGACGTAGGGAAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: LPFHSSSFSSWSAFRSFCRVIGL*DVGKPL
Trigger: AAGCGGCTTCCCTACGTCCCAGAGCCCTATTACCCG...ACAGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGAAGAGTGGAAAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000492164.5
ENST00000498399.1
CDS-3UTR TCA 90 bp CTGAACAGTCTCACCAGAGTACTTCTGAAATGCCATCAGCAGGCCTCCTACAGGCGTAACTGTACGAGGTaGGAATCCGTGCATTTGACC +
Preference number: 4 (lower is better)
Translates to: LNSLTRVLLKCHQQASYRRNCTR*ESVHLT
Trigger: GGTCAAATGCACGGATTCTCACCTCGTACAGTTACG...CCTGTAGGAGGCCTGCTGATGGCATTTCAGAAGTACTCTGGTGAGACTGTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463927.6
ENST00000486418.5
ENST00000492164.5
CDS-3UTR TCA 90 bp TGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGCGTAACTGTACGAGGTaGGAATCCGTGCATTTGACC +
Preference number: 4 (lower is better)
Translates to: CWHSSDMAAPFSSPVSFKRNCTR*ESVHLT
Trigger: GGTCAAATGCACGGATTCTCACCTCGTACAGTTACG...CTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
CDS-3UTR TCA 90 bp TCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGCACTTACCTACGGACAAACTTaGGCGCTCAGGACTTCAAGT +
Preference number: 4 (lower is better)
Translates to: SDMAAPFSSPVSFKFRALTYGQT*ALRTSS
Trigger: ACTTGAAGTCCTGAGCGCTCAAGTTTGTCCGTAGGT...AAGTGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
CDS-3UTR TCA 90 bp TCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGCACTTTCACCAGAGTACTTCTaGAATGCCATCAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SDMAAPFSSPVSFKFRALSPEYF*NAISRP
Trigger: AGGCCTGCTGATGGCATTTCAGAAGTACTCTGGTGA...AAGTGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
ENST00000498399.1
CDS-3UTR TCA 90 bp GCTTCCAGGACCCAAGGGTTTCACAGACCATTTGCCTACCTGGTTCTTTCCTCTTCACCAGAGTACTTCTaGAATGCCATCAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ASRTQGFHRPFAYLVLSSSPEYF*NAISRP
Trigger: AGGCCTGCTGATGGCATTTCAGAAGTACTCTGGTGA...AGAGGAAAGAACCAGGTAGGCAAATGGTCTGTGAAACCCTTGGGTCCTGGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR TCA 90 bp ATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGCACTCCTTCAGCTCTCCAGTaGGTTTCAAGTTCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: IGHGSSLQLSSEFQVQSTPSALQ*VSSSEH
Trigger: GTGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGG...AGTGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
ENST00000498399.1
CDS-3UTR GCA 90 bp ATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACCCAGGTTAACCCTCTaGCAGAGGGCTCGACACCCA +
Preference number: 4 (lower is better)
Translates to: MECLSILLFSFLNSLTRVPRLTL*QRARHP
Trigger: TGGGTGTCGAGCCCTCTGGCAGAGGGTTAACCTGGG...TACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000486418.5
ENST00000492164.5
CDS-3UTR GCA 90 bp CATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGATCTGCTGTTCATCTTTaGCAAACAGCTCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: HSSDMAAPFSSPVSFKFRSAVHL*QTAPGG
Trigger: GCCTCCGGGAGCTGTTTGGCAAAGATGAACAGCAGA...TCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000494664.6
CDS-3UTR GCA 90 bp GCCTGTCTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGATTTTCTCAGGGAGGTaGTCAGTAACTTGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: ACLLAFIGHGSSLQLSSEIFSGR*SVTCSL
Trigger: CAGACTACAAGTTACTGAGCACCTCCCTGAGAAAAT...CTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAGACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000494664.6
ENST00000498399.1
CDS-3UTR GCA 90 bp TGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGGAGTGTTTTACTCTTTaGCAAACAGCTCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: CWHSSDMAAPFSSPVSFKECFTL*QTAPGG
Trigger: GCCTCCGGGAGCTGTTTGGCAAAGAGTAAAACACTC...CTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498399.1
CDS-3UTR GCA 90 bp GCCTGTCTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTAGCTACCTCACTATaGTGCTTCACAAACCTTGCT +
Preference number: 4 (lower is better)
Translates to: ACLLAFIGHGSSLQLSSELATSL*CFTNLA
Trigger: AGCAAGGTTTGTGAAGCAGCATAGTGAGGTAGCTAA...CTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAGACAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR CCA 90 bp TCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACTTCTGAAATGCGTGGCGGCACCTCCATaGCCTTCTCTCGACCTACGG +
Preference number: 4 (lower is better)
Translates to: SILLFSFLNSLTRVLLKCVAAPP*PSLDLR
Trigger: CCGTAGGTCGAGAGAAGGCCATGGAGGTGCCGCCAC...GCATTTCAGAAGTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000486418.5
ENST00000492164.5
CDS-3UTR CCA 90 bp GCCTGTCTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGAGCATGAATAAAAGCTaGTATTCCCCCATACACCCA +
Preference number: 4 (lower is better)
Translates to: ACLLAFIGHGSSLQLSSESMNKS*YSPIHP
Trigger: TGGGTGTATGGGGGAATACCAGCTTTTATTCATGCT...CTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAGACAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000494664.6
CDS-3UTR CCA 90 bp CCACAGGTACCAGCACTTAAATTTGTCAGCAGGCTGACCAAAGAGTGGCCTGTCAGGCTGACCAAAGAGTaGCCTGTCTGTTGGCATTCA +
Preference number: 4 (lower is better)
Translates to: PQVPALKFVSRLTKEWPVRLTKE*PVCWHS
Trigger: TGAATGCCAACAGACAGGCCACTCTTTGGTCAGCCT...GACAGGCCACTCTTTGGTCAGCCTGCTGACAAATTTAAGTGCTGGTACCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000494664.6
ENST00000498399.1
CDS-3UTR CCA 90 bp TCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGCAAGGCTGACCAAAGAGTaGCCTGTCTGTTGGCATTCA +
Preference number: 4 (lower is better)
Translates to: SSDMAAPFSSPVSFKFRARLTKE*PVCWHS
Trigger: TGAATGCCAACAGACAGGCCACTCTTTGGTCAGCCT...TGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000494664.6
ENST00000498399.1
CDS-3UTR TCA 90 bp CTGCCTTTCCACTCTTCCAGTTTTAGCTCATGGAGTGCCTTTCGATCCTTCTGTGAGAATCCGTGCATTTaGCCCAGGTTAACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LPFHSSSFSSWSAFRSFCENPCI*PRLTLC
Trigger: GCAGAGGGTTAACCTGGGTCAAATGCACGGATTCTC...ACAGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGAAGAGTGGAAAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000492164.5
CDS-3UTR TCA 90 bp TTAGCTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACGCCAGCCATAACGAATaGAGCCTCGTGTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LAHGVPFDPSVFFPEQSHASHNE*SLVWQH
Trigger: GTGCTGCCACACGAGGCTTCATTCGTTATGGCTGGC...GTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTCCATGAGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000492164.5
CDS-3UTR TCA 90 bp AAATGCCATCAGCAGGCCTCCTACAGGAGTGCCCAGCAAGGCTCCAATTATGCCTTCTGTTTTCTTTCCTaGACAGTCTCACCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: KCHQQASYRSAQQGSNYAFCFLS*TVSPEY
Trigger: GTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAA...GGCATAATTGGAGCCTTGCTGGGCACTCCTGTAGGAGGCCTGCTGATGGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486418.5
ENST00000492164.5
CDS-3UTR TCA 90 bp CTTCTGAAATGCCATCAGCAGGCCTCCTACAGGAGTGCCCAGCAAGGCTCCAATTTCTGTTTTCTTTCCTaGACAGTCTCACCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: LLKCHQQASYRSAQQGSNFCFLS*TVSPEY
Trigger: GTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAA...ATTGGAGCCTTGCTGGGCACTCCTGTAGGAGGCCTGCTGATGGCATTTCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486418.5
ENST00000492164.5
CDS-3UTR TCA 90 bp CTCACACTGCTTCCAGGACCCAAGGGTTTCACAGACCATTTGCCTACCTGGTTCATTTCTGGGTCTTTCTaGCATCAGCAGAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: LTLLPGPKGFTDHLPTWFISGSF*HQQRTG
Trigger: TCCAGTTCTCTGCTGATGTCAGAAAGACCCAGAAAT...GAACCAGGTAGGCAAATGGTCTGTGAAACCCTTGGGTCCTGGAAGCAGTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR GCA 90 bp TCCACTCTTCCAGTTTTAGCTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCCAGGTTAACCCTCTaGCAGAGGGCTCGACACCCA +
Preference number: 4 (lower is better)
Translates to: STLPVLAHGVPFDPSVFFPRLTL*QRARHP
Trigger: TGGGTGTCGAGCCCTCTGGCAGAGGGTTAACCTGGG...AAAGAAAACAGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGAAGAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000492164.5
CDS-3UTR GCA 90 bp TTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGCTGTGGCAGCACGATGTaGAGATTGCACAGCATCAAA +
Preference number: 4 (lower is better)
Translates to: FIGHGSSLQLSSEFQVQSCGSTM*RLHSIK
Trigger: TTTGATGCTGTGCAATCTGCACATCGTGCTGCCACA...GCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000494664.6
CDS-3UTR GCA 90 bp TTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGCAGAGTACTTCTGAAATaGCATCAGCAGGCCTCCTAC +
Preference number: 4 (lower is better)
Translates to: FIGHGSSLQLSSEFQVQSRVLLK*HQQASY
Trigger: GTAGGAGGCCTGCTGATGGCATTTCAGAAGTACTCT...GCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
ENST00000498399.1
CDS-3UTR CCA 90 bp TTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGCTCACTAGACCAGAAGTaGACGCAACTTAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: FIGHGSSLQLSSEFQVQSSLDQK*TQLKLG
Trigger: TCCCAGCTTAAGTTGCGTCCACTTCTGGTCTAGTGA...GCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR GCA 90 bp TGGCCTGTCTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGTCCTTTGAAATTCTCTaGTGTTCATCTTTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: WPVCWHSSDMAAPFSSPVSFEIL*CSSLPN
Trigger: GTTTGGCAAAGATGAACAGCAGAGAATTTCAAAGGA...CACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAGACAGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000494664.6
CDS-3UTR GCA 90 bp CATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGATGCCTGCTGTAGCTaGCGTCTTACAGATATTAGC +
Preference number: 4 (lower is better)
Translates to: HSSDMAAPFSSPVSFKFRDACCS*RLTDIS
Trigger: GCTAATATCTGTAAGACGGCAGCTACAGCAGGCATC...TCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000494664.6
CDS-3UTR GCA 90 bp GGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACTCCAGCCAATGATGCCTaGTGTAGCTGCCGTCTTACA +
Preference number: 4 (lower is better)
Translates to: GVPFDPSVFFPEQSHQSTPANDA*CSCRLT
Trigger: TGTAAGACGGCAGCTACAGCAGGCATCATTGGCTGG...AGTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000463927.6
CDS-3UTR GCA 90 bp TGGCCTGTCTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGATTTCTGCCTGGCTCTaGTCAATGTATTGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: WPVCWHSSDMAAPFSSPVISAWL*SMYCCL
Trigger: TAAACAACAATACATTGAGCAGAGCCAGGCAGAAAT...CACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAGACAGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000494664.6
CDS-3UTR GCA 90 bp GCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGCACTTTCAGTCCTTGTCTGTGGCAGCACGATGTaGAGATTGCACAGCATCAAA +
Preference number: 4 (lower is better)
Translates to: APFSSPVSFKFRALSVLVCGSTM*RLHSIK
Trigger: TTTGATGCTGTGCAATCTGCACATCGTGCTGCCACA...GACAAGGACTGAAAGTGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264244.7
CDS-3UTR GCA 90 bp CACTCTTCCAGTTTTAGCTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCACAAGAGCAAGCCACTaGCACCACAGGTACCAGCAC +
Preference number: 4 (lower is better)
Translates to: HSSSFSSWSAFRSFCFLSTRASH*HHRYQH
Trigger: GTGCTGGTACCTGTGGTGGCAGTGGCTTGCTCTTGT...GGAAAGAAAACAGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGAAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000498399.1
CDS-3UTR GCA 90 bp CATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTGGCACTTTTACTCTTTaGCAAACAGCTCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: HGVPFDPSVFFPEQSHQSGTFTL*QTAPGG
Trigger: GCCTCCGGGAGCTGTTTGGCAAAGAGTAAAAGTGCC...ACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463927.6
CDS-3UTR GCA 90 bp GACATCAGCAGAGAACTGGAAAGACATAGCCAACTGCTGTTCATGTTACTCATGGGCCTCCTACAGGAGTaGCCAGCAAGGCTCCAATTA +
Preference number: 4 (lower is better)
Translates to: DISRELERHSQLLFMLLMGLLQE*PARLQL
Trigger: TAATTGGAGCCTTGCTGGGCACTCCTGTAGGAGGCC...CATGAGTAACATGAACAGCAGTTGGCTATGTCTTTCCAGTTCTCTGCTGATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR GCA 90 bp CTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGATGTGCAGATTGTCTTTaGCAAACAGCTCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LMECLSILLFSFLNSLTRCADCL*QTAPGG
Trigger: GCCTCCGGGAGCTGTTTGGCAAAGACAATCTGCACA...TCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTCCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492164.5
CDS-3UTR CCA 90 bp CTTCCAGTTTTAGCTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACGGGTAATAGGGCTCTaGGACGTAGGGAAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: LPVLAHGVPFDPSVFFPERVIGL*DVGKPL
Trigger: AAGCGGCTTCCCTACGTCCCAGAGCCCTATTACCCG...TTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000486418.5
ENST00000492164.5
ENST00000498399.1
CDS-3UTR CCA 90 bp GCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGTCCAGTTTTAGCTCATaGAGTGCCTTTCGATCCTTC +
Preference number: 4 (lower is better)
Translates to: AFIGHGSSLQLSSEFQVQSSFSS*SAFRSF
Trigger: GAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGA...CTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
ENST00000498399.1
CDS-3UTR CCA 90 bp CTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGCTAAGCCACATGGCTaGGATTTAAAGCCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: LLAFIGHGSSLQLSSEFQAKPHG*DLKPLE
Trigger: CTCTAAAGGCTTTAAATCCCAGCCATGTGGCTTAGC...TTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR CCA 90 bp CCACTGCCACCACAGGTACCAGCACTTAAATTTGTCAGCAGGCTGACCAAAGAGACATCAGCAGAGAACTaGAAAGACATAGCCAACTGC +
Preference number: 4 (lower is better)
Translates to: PLPPQVPALKFVSRLTKETSAEN*KDIANC
Trigger: GCAGTTGGCTATGTCTTTCCAGTTCTCTGCTGATGT...CTCTTTGGTCAGCCTGCTGACAAATTTAAGTGCTGGTACCTGTGGTGGCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR TCA 90 bp TTAGCTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACGAGAATCCGTGCATTTaGCCCAGGTTAACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LAHGVPFDPSVFFPEQSHENPCI*PRLTLC
Trigger: GCAGAGGGTTAACCTGGGTCAAATGCACGGATTCTC...GTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTCCATGAGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000486418.5
ENST00000492164.5
CDS-3UTR TCA 90 bp CTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGACGTAACTGTACGAGGTaGGAATCCGTGCATTTGACC +
Preference number: 4 (lower is better)
Translates to: LMECLSILLFSFLNSLTRRNCTR*ESVHLT
Trigger: GGTCAAATGCACGGATTCTCACCTCGTACAGTTACG...TCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTCCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000486418.5
ENST00000492164.5
CDS-3UTR TCA 90 bp AAAAGACTTCCCGTGACAGCTCCTGCAATTACAAAATGGCTTAAGGCATCTTTAGCCAGCCATAACGAATaGAGCCTCGTGTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: KRLPVTAPAITKWLKASLASHNE*SLVWQH
Trigger: GTGCTGCCACACGAGGCTTCATTCGTTATGGCTGGC...TAAAGATGCCTTAAGCCATTTTGTAATTGCAGGAGCTGTCACGGGAAGTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492164.5
CDS-3UTR TCA 90 bp CATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTTCACCAGAGTACTTCTaGAATGCCATCAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: HGVPFDPSVFFPEQSHQSSPEYF*NAISRP
Trigger: AGGCCTGCTGATGGCATTTCAGAAGTACTCTGGTGA...ACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000486418.5
ENST00000492164.5
ENST00000498399.1
CDS-3UTR TCA 90 bp TCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGCACTTTTCTGTTTTCTTTCCTaGACAGTCTCACCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: SDMAAPFSSPVSFKFRALFCFLS*TVSPEY
Trigger: GTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAA...AAGTGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
ENST00000498399.1
CDS-3UTR TCA 90 bp ATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGCACTTTCTGTTTTCTTTCCTaGACAGTCTCACCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: IGHGSSLQLSSEFQVQSTFCFLS*TVSPEY
Trigger: GTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAA...AGTGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
ENST00000498399.1
CDS-3UTR TCA 90 bp CTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGACCTTCAGCTCTCCAGTaGGTTTCAAGTTCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: LMECLSILLFSFLNSLTRPSALQ*VSSSEH
Trigger: GTGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGG...TCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTCCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000498399.1
CDS-3UTR TCA 90 bp ACTACACATTTACACTCACACTGCTTCCAGGACCCAAGGGTTTCACAGACCATTCCTTCAGCTCTCCAGTaGGTTTCAAGTTCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: TTHLHSHCFQDPRVSQTIPSALQ*VSSSEH
Trigger: GTGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGG...AATGGTCTGTGAAACCCTTGGGTCCTGGAAGCAGTGTGAGTGTAAATGTGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR GCA 90 bp TCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGCACTTATTTTCTCAGGGAGGTaGTCAGTAACTTGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: SDMAAPFSSPVSFKFRALIFSGR*SVTCSL
Trigger: CAGACTACAAGTTACTGAGCACCTCCCTGAGAAAAT...AAGTGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
ENST00000498399.1
CDS-3UTR GCA 90 bp GCTTCCAGGACCCAAGGGTTTCACAGACCATTTGCCTACCTGGTTCTTTCCTCTATTTTCTCAGGGAGGTaGTCAGTAACTTGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: ASRTQGFHRPFAYLVLSSIFSGR*SVTCSL
Trigger: CAGACTACAAGTTACTGAGCACCTCCCTGAGAAAAT...AGAGGAAAGAACCAGGTAGGCAAATGGTCTGTGAAACCCTTGGGTCCTGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR CCA 90 bp TTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTTCCAGTTTTAGCTCATaGAGTGCCTTTCGATCCTTC +
Preference number: 4 (lower is better)
Translates to: LAFIGHGSSLQLSSEFQVSSFSS*SAFRSF
Trigger: GAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGA...AACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
ENST00000498399.1
CDS-3UTR CCA 90 bp GATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACTTCTGAAATGCCAGGCATTCATCGGACATaGCAGCTCCCTTCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: DPSVFFPEQSHQSTSEMPGIHRT*QLPSAL
Trigger: GAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCC...TGGCATTTCAGAAGTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000498399.1
CDS-3UTR CCA 90 bp CTTTCCACTCTTCCAGTTTTAGCTCATGGAGTGCCTTTCGATCCTTCTGTTTTCGAGTGGCCTGTCTGTTaGCATTCATCGGACATGGCA +
Preference number: 4 (lower is better)
Translates to: LSTLPVLAHGVPFDPSVFEWPVC*HSSDMA
Trigger: TGCCATGTCCGATGAATGCCAACAGACAGGCCACTC...GAAAACAGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGAAGAGTGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000498399.1
CDS-3UTR TCA 90 bp CCTTTCCACTCTTCCAGTTTTAGCTCATGGAGTGCCTTTCGATCCTTCTGTTTTCGTAACTGTACGAGGTaGGAATCCGTGCATTTGACC +
Preference number: 4 (lower is better)
Translates to: PFHSSSFSSWSAFRSFCFRNCTR*ESVHLT
Trigger: GGTCAAATGCACGGATTCTCACCTCGTACAGTTACG...AAAACAGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGAAGAGTGGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000492164.5
CDS-3UTR TCA 90 bp ATGCCTGCTGTAGCTGCCGTCTTACAGATATTAGCAAGGTCCTTTGAAATTCTCCGTAACTGTACGAGGTaGGAATCCGTGCATTTGACC +
Preference number: 4 (lower is better)
Translates to: MPAVAAVLQILARSFEILRNCTR*ESVHLT
Trigger: GGTCAAATGCACGGATTCTCACCTCGTACAGTTACG...GAGAATTTCAAAGGACCTTGCTAATATCTGTAAGACGGCAGCTACAGCAGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463927.6
CDS-3UTR TCA 90 bp ATGCCTGCTGTAGCTGCCGTCTTACAGATATTAGCAAGGTCCTTTGAAATTCTCTCACCAGAGTACTTCTaGAATGCCATCAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: MPAVAAVLQILARSFEILSPEYF*NAISRP
Trigger: AGGCCTGCTGATGGCATTTCAGAAGTACTCTGGTGA...GAGAATTTCAAAGGACCTTGCTAATATCTGTAAGACGGCAGCTACAGCAGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463927.6
CDS-3UTR TCA 90 bp TGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCCAGTGTTTCCCGTATTaGCAGGAATACTTAACTCAA +
Preference number: 4 (lower is better)
Translates to: WHSSDMAAPFSSPVSFKFQCFPY*QEYLTQ
Trigger: TTGAGTTAAGTATTCCTGTCAATACGGGAAACACTG...GAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR CCA 90 bp AACAGTCTCACCAGAGTACTTCTGAAATGCCATCAGCAGGCCTCCTACAGGAGTAGCATGAATAAAAGCTaGTATTCCCCCATACACCCA +
Preference number: 4 (lower is better)
Translates to: NSLTRVLLKCHQQASYRSSMNKS*YSPIHP
Trigger: TGGGTGTATGGGGGAATACCAGCTTTTATTCATGCT...ACTCCTGTAGGAGGCCTGCTGATGGCATTTCAGAAGTACTCTGGTGAGACTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463927.6
CDS-3UTR CCA 90 bp CGCAGGCCTACGTTTATCCTAAAAAGACTTCCCGTGACAGCTCCTGCAATTACATCCAGTTTTAGCTCATaGAGTGCCTTTCGATCCTTC +
Preference number: 4 (lower is better)
Translates to: RRPTFILKRLPVTAPAITSSFSS*SAFRSF
Trigger: GAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGA...TGTAATTGCAGGAGCTGTCACGGGAAGTCTTTTTAGGATAAACGTAGGCCTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492164.5
CDS-3UTR CCA 90 bp CTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACTTCTGAAAGGCATTCATCGGACATaGCAGCTCCCTTCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: LSILLFSFLNSLTRVLLKGIHRT*QLPSAL
Trigger: GAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCC...TTTCAGAAGTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000498399.1
CDS-3UTR CCA 90 bp TCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGCAGGACGCAACTTAAGCTaGGATAATCACATTATCATC +
Preference number: 4 (lower is better)
Translates to: SSDMAAPFSSPVSFKFRAGRNLS*DNHIII
Trigger: GATGATAATGTGATTATCCCAGCTTAAGTTGCGTCC...TGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR TCA 90 bp TCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACTTCTGAAATGCTCACCAGAGTACTTCTaGAATGCCATCAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SILLFSFLNSLTRVLLKCSPEYF*NAISRP
Trigger: AGGCCTGCTGATGGCATTTCAGAAGTACTCTGGTGA...GCATTTCAGAAGTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000486418.5
ENST00000492164.5
ENST00000498399.1
CDS-3UTR TCA 90 bp ACTCTTCCAGTTTTAGCTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTCCTTCAGCTCTCCAGTaGGTTTCAAGTTCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: TLPVLAHGVPFDPSVFFPPSALQ*VSSSEH
Trigger: GTGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGG...AGGAAAGAAAACAGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000498399.1
CDS-3UTR GCA 90 bp ATAAATTTCTGCCTGGCTCTGCTCAATGTATTGTTGTTTAGCATGAATAAAAGCCCCAGGTTAACCCTCTaGCAGAGGGCTCGACACCCA +
Preference number: 4 (lower is better)
Translates to: INFCLALLNVLLFSMNKSPRLTL*QRARHP
Trigger: TGGGTGTCGAGCCCTCTGGCAGAGGGTTAACCTGGG...GCTTTTATTCATGCTAAACAACAATACATTGAGCAGAGCCAGGCAGAAATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463927.6
CDS-3UTR GCA 90 bp GCTGTAGCTGCCGTCTTACAGATATTAGCAAGGTCCTTTGAAATTCTCTGCTGTGATGCCTGCTGTAGCTaGCGTCTTACAGATATTAGC +
Preference number: 4 (lower is better)
Translates to: AVAAVLQILARSFEILCCDACCS*RLTDIS
Trigger: GCTAATATCTGTAAGACGGCAGCTACAGCAGGCATC...ACAGCAGAGAATTTCAAAGGACCTTGCTAATATCTGTAAGACGGCAGCTACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463927.6
CDS-3UTR GCA 90 bp CTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACTTCTGAAACCAGCCAATGATGCCTaGTGTAGCTGCCGTCTTACA +
Preference number: 4 (lower is better)
Translates to: LSILLFSFLNSLTRVLLKPANDA*CSCRLT
Trigger: TGTAAGACGGCAGCTACAGCAGGCATCATTGGCTGG...TTTCAGAAGTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000463927.6
CDS-3UTR GCA 90 bp CCACTGCCACCACAGGTACCAGCACTTAAATTTGTCAGCAGGCTGACCAAAGAGGTTATGATAAATTTCTaGCTGGCTCTGCTCAATGTA +
Preference number: 4 (lower is better)
Translates to: PLPPQVPALKFVSRLTKEVMINF*LALLNV
Trigger: TACATTGAGCAGAGCCAGGCAGAAATTTATCATAAC...CTCTTTGGTCAGCCTGCTGACAAATTTAAGTGCTGGTACCTGTGGTGGCAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000494664.6
CDS-3UTR GCA 90 bp CTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACTTCTGAAAGGCCTCCTACAGGAGTaGACAGCATCAAACCGGTTA +
Preference number: 4 (lower is better)
Translates to: LSILLFSFLNSLTRVLLKGLLQE*TASNRL
Trigger: TAACCGGTTTGATGCTGTGCACTCCTGTAGGAGGCC...TTTCAGAAGTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463927.6
CDS-3UTR GCA 90 bp TGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGCTGCTTCACAAACCTTaGTCCTGTGTAAAACTATAT +
Preference number: 4 (lower is better)
Translates to: CWHSSDMAAPFSSPVSFKLLHKP*SCVKLY
Trigger: ATATAGTTTTACACAGGAGCAAGGTTTGTGAAGCAG...CTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR CCA 90 bp AGGAGTGCACAGCATCAAACCGGTTATGATAAATTTCTGCCTGGCTCTGCTCAATCCAGTTTTAGCTCATaGAGTGCCTTTCGATCCTTC +
Preference number: 4 (lower is better)
Translates to: RSAQHQTGYDKFLPGSAQSSFSS*SAFRSF
Trigger: GAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGA...TTGAGCAGAGCCAGGCAGAAATTTATCATAACCGGTTTGATGCTGTGCACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463927.6
CDS-3UTR CCA 90 bp ACTACACATTTACACTCACACTGCTTCCAGGACCCAAGGGTTTCACAGACCATTTCCAGTTTTAGCTCATaGAGTGCCTTTCGATCCTTC +
Preference number: 4 (lower is better)
Translates to: TTHLHSHCFQDPRVSQTISSFSS*SAFRSF
Trigger: GAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGA...AATGGTCTGTGAAACCCTTGGGTCCTGGAAGCAGTGTGAGTGTAAATGTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR CCA 90 bp TTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACTTCTGAAATGGAGTGGCCTGTCTGTTaGCATTCATCGGACATGGCA +
Preference number: 4 (lower is better)
Translates to: FDPSVFFPEQSHQSTSEMEWPVC*HSSDMA
Trigger: TGCCATGTCCGATGAATGCCAACAGACAGGCCACTC...CATTTCAGAAGTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000498399.1
CDS-3UTR TCA 90 bp CTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACTTCTGAAAACCTACGGACAAACTTaGGCGCTCAGGACTTCAAGT +
Preference number: 4 (lower is better)
Translates to: LSILLFSFLNSLTRVLLKTYGQT*ALRTSS
Trigger: ACTTGAAGTCCTGAGCGCTCAAGTTTGTCCGTAGGT...TTTCAGAAGTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000486418.5
ENST00000492164.5
CDS-3UTR TCA 90 bp ACTACACATTTACACTCACACTGCTTCCAGGACCCAAGGGTTTCACAGACCATTTTCTGTTTTCTTTCCTaGACAGTCTCACCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: TTHLHSHCFQDPRVSQTIFCFLS*TVSPEY
Trigger: GTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAA...AATGGTCTGTGAAACCCTTGGGTCCTGGAAGCAGTGTGAGTGTAAATGTGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR CCA 90 bp GAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACTTTCCAGTTTTAGCTCATaGAGTGCCTTTCGATCCTTC +
Preference number: 4 (lower is better)
Translates to: ECLSILLFSFLNSLTRVLSSFSS*SAFRSF
Trigger: GAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGA...AAGTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000486418.5
ENST00000492164.5
ENST00000498399.1
CDS-3UTR TCA 90 bp GAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACTTTTCTGTTTTCTTTCCTaGACAGTCTCACCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: ECLSILLFSFLNSLTRVLFCFLS*TVSPEY
Trigger: GTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAA...AAGTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000486418.5
ENST00000492164.5
ENST00000498399.1
CDS-3UTR TCA 90 bp CCAGTTTTAGCTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGATTAGCAAGGTCCTTTaGAATTCTCTGCTGTTCACC +
Preference number: 4 (lower is better)
Translates to: PVLAHGVPFDPSVFFPEQISKVL*NSLLFT
Trigger: GGTGAACAGCAGAGAATTTCAAAGGACCTTGCTAAT...CTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463927.6
CDS-3UTR GCA 90 bp CTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACTTCTGAAAGATGCCTGCTGTAGCTaGCGTCTTACAGATATTAGC +
Preference number: 4 (lower is better)
Translates to: LSILLFSFLNSLTRVLLKDACCS*RLTDIS
Trigger: GCTAATATCTGTAAGACGGCAGCTACAGCAGGCATC...TTTCAGAAGTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000463927.6
CDS-3UTR GCA 90 bp CTGCCTTTCCACTCTTCCAGTTTTAGCTCATGGAGTGCCTTTCGATCCTTCTGTATTTCTGCCTGGCTCTaGTCAATGTATTGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: LPFHSSSFSSWSAFRSFCISAWL*SMYCCL
Trigger: TAAACAACAATACATTGAGCAGAGCCAGGCAGAAAT...ACAGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGAAGAGTGGAAAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000463927.6
CDS-3UTR GCA 90 bp CTGCCTTTCCACTCTTCCAGTTTTAGCTCATGGAGTGCCTTTCGATCCTTCTGTGTTATGATAAATTTCTaGCTGGCTCTGCTCAATGTA +
Preference number: 4 (lower is better)
Translates to: LPFHSSSFSSWSAFRSFCVMINF*LALLNV
Trigger: TACATTGAGCAGAGCCAGGCAGAAATTTATCATAAC...ACAGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGAAGAGTGGAAAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000463927.6
CDS-3UTR TCA 90 bp TCCACTCTTCCAGTTTTAGCTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTTTCTGTTTTCTTTCCTaGACAGTCTCACCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: STLPVLAHGVPFDPSVFFFCFLS*TVSPEY
Trigger: GTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAA...AAAGAAAACAGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGAAGAGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000492164.5
ENST00000498399.1
CDS-3UTR GCA 90 bp GCTCTGCTCAATGTATTGTTGTTTAGCATGAATAAAAGCTGGTATTCCCCCATAAGAGTACTTCTGAAATaGCATCAGCAGGCCTCCTAC +
Preference number: 4 (lower is better)
Translates to: ALLNVLLFSMNKSWYSPIRVLLK*HQQASY
Trigger: GTAGGAGGCCTGCTGATGGCATTTCAGAAGTACTCT...TATGGGGGAATACCAGCTTTTATTCATGCTAAACAACAATACATTGAGCAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463927.6
CDS-3UTR GCA 90 bp TCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACTTCTGAAATGCATTTTCTCAGGGAGGTaGTCAGTAACTTGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: SILLFSFLNSLTRVLLKCIFSGR*SVTCSL
Trigger: CAGACTACAAGTTACTGAGCACCTCCCTGAGAAAAT...GCATTTCAGAAGTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000498399.1
CDS-3UTR GCA 90 bp TTAGCTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACTCCTTTGAAATTCTCTaGTGTTCATCTTTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: LAHGVPFDPSVFFPEQSHSFEIL*CSSLPN
Trigger: GTTTGGCAAAGATGAACAGCAGAGAATTTCAAAGGA...GTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTCCATGAGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264244.7
CDS-3UTR GCA 90 bp GAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACTTGTTATGATAAATTTCTaGCTGGCTCTGCTCAATGTA +
Preference number: 4 (lower is better)
Translates to: ECLSILLFSFLNSLTRVLVMINF*LALLNV
Trigger: TACATTGAGCAGAGCCAGGCAGAAATTTATCATAAC...AAGTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000463927.6
CDS-3UTR GCA 90 bp TCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACTTCTGAAATGCTCCTTTGAAATTCTCTaGTGTTCACCTAGGCACTTT +
Preference number: 4 (lower is better)
Translates to: SILLFSFLNSLTRVLLKCSFEIL*CSPRHF
Trigger: AAAGTGCCTAGGTGAACAGCAGAGAATTTCAAAGGA...GCATTTCAGAAGTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463927.6
CDS-3UTR CCA 90 bp GGGTTTCTAGGAAGGTTTAGCAGTGCTTCAATTTTCTTAGCATCATTCTCAGGTAGCATGAATAAAAGCTaGTATTCCCCCATACACCCA +
Preference number: 4 (lower is better)
Translates to: GFLGRFSSASIFLASFSGSMNKS*YSPIHP
Trigger: TGGGTGTATGGGGGAATACCAGCTTTTATTCATGCT...ACCTGAGAATGATGCTAAGAAAATTGAAGCACTGCTAAACCTTCCTAGAAACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264244.7
CDS-3UTR CCA 90 bp CTTCACAAACCTTGCTCCTGTGTAAAACTATATTCTCAGTGTAGGGCAGAGAGGCTTAGATCCCTAAGATaGCTTTTTCTCCTTGGTATT +
Preference number: 4 (lower is better)
Translates to: LHKPCSCVKLYSQCRAERLRSLR*LFLLGI
Trigger: AATACCAAGGAGAAAAAGCCATCTTAGGGATCTAAG...CCTCTCTGCCCTACACTGAGAATATAGTTTTACACAGGAGCAAGGTTTGTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR GCA 90 bp CTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACTTCTGAAAATTTCTGCCTGGCTCTaGTCAATGTATTGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: LSILLFSFLNSLTRVLLKISAWL*SMYCCL
Trigger: TAAACAACAATACATTGAGCAGAGCCAGGCAGAAAT...TTTCAGAAGTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000463927.6
3UTR CAA 72 bp GTTATGATAAATTTCTGCCTGGCTCTGCTCAATGTATaGTTGTTTAGCATGAATAAAAGCTGGTATTCCCCC +
Preference number: 4 (lower is better)
Translates to: VMINFCLALLNV*LFSMNKSWYSP
Trigger: GGGGGAATACCAGCTTTTATTCATGCTAAACAACAATACATTGAGCAGAGCCAGGCAGAAATTTATCATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463927.6
3UTR CAA 72 bp ATGATAAATTTCTGCCTGGCTCTGCTCAATGTATTGTaGTTTAGCATGAATAAAAGCTGGTATTCCCCCATA +
Preference number: 4 (lower is better)
Translates to: MINFCLALLNVL*FSMNKSWYSPI
Trigger: TATGGGGGAATACCAGCTTTTATTCATGCTAAACAACAATACATTGAGCAGAGCCAGGCAGAAATTTATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463927.6
CDS TCA 90 bp CGGTGGCGGCACCTCCATGGCCTTCTCTCGACCTACGGACAAACTTaGGCGCTCAGGACTTCAAGTCCTCGCGGACGTGCCGCGGGAGAG +
Preference number: 5 (lower is better)
Translates to: RWRHLHGLLSTYGQT*ALRTSSPRGRAAGE
Trigger: CTCTCCCGCGGCACGTCCGCGAGGACTTGAAGTCCTGAGCGCTCAAGTTTGTCCGTAGGTCGAGAGAAGGCCATGGAGGTGCCGCCACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000466984.1
ENST00000486418.5
ENST00000492164.5
ENST00000493694.1
ENST00000494664.6
CDS CCA 90 bp CAGCTCCCGGAGGCGGTCCCATCCAGATTCCGGGTAATAGGGCTCTaGGACGTAGGGAAGCCGCTTCTGACGCTCCTCAAGGACTTCCGA +
Preference number: 5 (lower is better)
Translates to: QLPEAVPSRFRVIGL*DVGKPLLTLLKDFR
Trigger: TCGGAAGTCCTTGAGGAGCGTCAGAAGCGGCTTCCCTACGTCCCAGAGCCCTATTACCCGGAATCTGGATGGGACCGCCTCCGGGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000466984.1
ENST00000486418.5
ENST00000492164.5
ENST00000493694.1
ENST00000494664.6
ENST00000498399.1
CDS TCA 90 bp TCAAGTCCTCGCGGACGTGCCGCGGGAGAGCGTAACTGTACGAGGTaGGAATCCGTGCATTTGACCCAGGTTAACCCTCTGCCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: SSPRGRAAGERNCTR*ESVHLTQVNPLPEG
Trigger: GCCCTCTGGCAGAGGGTTAACCTGGGTCAAATGCACGGATTCTCACCTCGTACAGTTACGCTCTCCCGCGGCACGTCCGCGAGGACTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000466984.1
ENST00000486418.5
ENST00000492164.5
ENST00000493694.1
ENST00000494664.6
CDS CCA 90 bp ATGCTCTACAGAGAAAGCTCCGCGGTGCCGGTGGCGGCACCTCCATaGCCTTCTCTCGACCTACGGACAAACTTGAGCGCTCAGGACTTC +
Preference number: 5 (lower is better)
Translates to: MLYRESSAVPVAAPP*PSLDLRTNLSAQDF
Trigger: GAAGTCCTGAGCGCTCAAGTTTGTCCGTAGGTCGAGAGAAGGCCATGGAGGTGCCGCCACCGGCACCGCGGAGCTTTCTCTGTAGAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000466984.1
ENST00000486418.5
ENST00000492164.5
ENST00000493694.1
ENST00000494664.6
CDS TCA 90 bp GTGCCGCGGGAGAGCGTAACTGTACGAGGTGAGAATCCGTGCATTTaGCCCAGGTTAACCCTCTGCCAGAGGGCTCGACACCCACACCTT +
Preference number: 5 (lower is better)
Translates to: VPRESVTVRGENPCI*PRLTLCQRARHPHL
Trigger: AAGGTGTGGGTGTCGAGCCCTCTGGCAGAGGGTTAACCTGGGTCAAATGCACGGATTCTCACCTCGTACAGTTACGCTCTCCCGCGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000466984.1
ENST00000486418.5
ENST00000492164.5
ENST00000493694.1
ENST00000494664.6
CDS-3UTR CAA 90 bp CCAGCAAGGCTCCAATTATGCCACCAGCCACCAGGCCACGCAGGCCTACGTTTAGACCTACGGACAAACTaGAGCGCTCAGGACTTCAAG +
Preference number: 5 (lower is better)
Translates to: PARLQLCHQPPGHAGLRLDLRTN*SAQDFK
Trigger: CTTGAAGTCCTGAGCGCTCAAGTTTGTCCGTAGGTC...TAAACGTAGGCCTGCGTGGCCTGGTGGCTGGTGGCATAATTGGAGCCTTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486418.5
ENST00000492164.5
CDS-3UTR CAA 90 bp GCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGGTCCCCGGCCTCGCTTaGGAGTCCTTGGAAATACGA +
Preference number: 5 (lower is better)
Translates to: AFIGHGSSLQLSSEFQVQVPGLA*ESLEIR
Trigger: TCGTATTTCCAAGGACTCCAAAGCGAGGCCGGGGAC...CTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493694.1
ENST00000494664.6
CDS-3UTR CAA 90 bp TCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGCACCTACAGGAGTGTCTTaGCCAAACAGCTCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: SSDMAAPFSSPVSFKFRAPTGVS*PNSSRR
Trigger: CCTCCGGGAGCTGTTTGGCAAAGACACTCCTGTAGG...TGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493694.1
CDS TCA 90 bp TCACAAACACTGCAGTTCTCCAACCCCAGCGCCAGCCATAACGAATaGAGCCTCGTGTGGCAGCACGATGTGCAGATTGCACAGCATCAA +
Preference number: 5 (lower is better)
Translates to: SQTLQFSNPSASHNE*SLVWQHDVQIAQHQ
Trigger: TTGATGCTGTGCAATCTGCACATCGTGCTGCCACACGAGGCTTCATTCGTTATGGCTGGCGCTGGGGTTGGAGAACTGCAGTGTTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000494664.6
CDS-3UTR CAA 90 bp TCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGCACTTCTCTGCTGTTCATCTTaGCCAAACAGCTCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: SDMAAPFSSPVSFKFRALLCCSS*PNSSRR
Trigger: CCTCCGGGAGCTGTTTGGCAAAGATGAACAGCAGAG...AAGTGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000494664.6
CDS-3UTR CAA 90 bp GCTTCCAGGACCCAAGGGTTTCACAGACCATTTGCCTACCTGGTTCTTTCCTCTCTCTGCTGTTCATCTTaGCCAAACAGCTCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: ASRTQGFHRPFAYLVLSSLCCSS*PNSSRR
Trigger: CCTCCGGGAGCTGTTTGGCAAAGATGAACAGCAGAG...AGAGGAAAGAACCAGGTAGGCAAATGGTCTGTGAAACCCTTGGGTCCTGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR CAA 90 bp TCTCACCAGAGTACTTCTGAAATGCCATCAGCAGGCCTCCTACAGGAGTGCCCAATGTGCAGATTGTCTTaGCCAAACAGCTCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: SHQSTSEMPSAGLLQECPMCRLS*PNSSRR
Trigger: CCTCCGGGAGCTGTTTGGCAAAGACAATCTGCACAT...TGGGCACTCCTGTAGGAGGCCTGCTGATGGCATTTCAGAAGTACTCTGGTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492164.5
CDS TCA 90 bp TCACAAACACTGCAGTTCTCCAACCCCAGCGCCAGCCATAACGAATaGAGCCTCGTGTGGCAGCACGATGTGCAGATTGTCTTTGCCAAA +
Preference number: 5 (lower is better)
Translates to: SQTLQFSNPSASHNE*SLVWQHDVQIVFAK
Trigger: TTTGGCAAAGACAATCTGCACATCGTGCTGCCACACGAGGCTTCATTCGTTATGGCTGGCGCTGGGGTTGGAGAACTGCAGTGTTTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492164.5
CDS-3UTR CAA 90 bp TGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCGACCTACGGACAAACTaGAGCGCTCAGGACTTCAAG +
Preference number: 5 (lower is better)
Translates to: WHSSDMAAPFSSPVSFKFDLRTN*SAQDFK
Trigger: CTTGAAGTCCTGAGCGCTCAAGTTTGTCCGTAGGTC...GAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
CDS-3UTR CAA 90 bp CTGAACAGTCTCACCAGAGTACTTCTGAAATGCCATCAGCAGGCCTCCTACAGGGACCTACGGACAAACTaGAGCGCTCAGGACTTCAAG +
Preference number: 5 (lower is better)
Translates to: LNSLTRVLLKCHQQASYRDLRTN*SAQDFK
Trigger: CTTGAAGTCCTGAGCGCTCAAGTTTGTCCGTAGGTC...CCTGTAGGAGGCCTGCTGATGGCATTTCAGAAGTACTCTGGTGAGACTGTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463927.6
ENST00000486418.5
ENST00000492164.5
CDS-3UTR CAA 90 bp TCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGCACTTGACCTACGGACAAACTaGAGCGCTCAGGACTTCAAG +
Preference number: 5 (lower is better)
Translates to: SDMAAPFSSPVSFKFRALDLRTN*SAQDFK
Trigger: CTTGAAGTCCTGAGCGCTCAAGTTTGTCCGTAGGTC...AAGTGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
CDS-3UTR CAA 90 bp TCTCACCAGAGTACTTCTGAAATGCCATCAGCAGGCCTCCTACAGGAGTGCCCAAGCACGATGTGCAGATaGTCTTTGCCAAACAGCTCC +
Preference number: 5 (lower is better)
Translates to: SHQSTSEMPSAGLLQECPSTMCR*SLPNSS
Trigger: GGAGCTGTTTGGCAAAGACAATCTGCACATCGTGCT...TGGGCACTCCTGTAGGAGGCCTGCTGATGGCATTTCAGAAGTACTCTGGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492164.5
CDS-3UTR CAA 90 bp CCACTGCCACCACAGGTACCAGCACTTAAATTTGTCAGCAGGCTGACCAAAGAGAGCACGATGTGCAGATaGCACAGCATCAAACCGGTT +
Preference number: 5 (lower is better)
Translates to: PLPPQVPALKFVSRLTKESTMCR*HSIKPV
Trigger: AACCGGTTTGATGCTGTGCAATCTGCACATCGTGCT...CTCTTTGGTCAGCCTGCTGACAAATTTAAGTGCTGGTACCTGTGGTGGCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000494664.6
CDS-3UTR CAA 90 bp CTCACACTGCTTCCAGGACCCAAGGGTTTCACAGACCATTTGCCTACCTGGTTCGGTTTCACAGACCATTaGCCTACCTGGTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: LTLLPGPKGFTDHLPTWFGFTDH*PTWFFP
Trigger: AGGAAAGAACCAGGTAGGCAAATGGTCTGTGAAACC...GAACCAGGTAGGCAAATGGTCTGTGAAACCCTTGGGTCCTGGAAGCAGTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR CAA 90 bp TGGCCTGTCTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGGCAGTGTTTCCCGTATaGACAGGAATACTTAACTCA +
Preference number: 5 (lower is better)
Translates to: WPVCWHSSDMAAPFSSPVAVFPV*TGILNS
Trigger: TGAGTTAAGTATTCCTGTCAATACGGGAAACACTGC...CACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAGACAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR CAA 90 bp GTGGCCTGTCTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGCTGCTTCACAAACCTaGCTCCTGTGTAAAACTATA +
Preference number: 5 (lower is better)
Translates to: VACLLAFIGHGSSLQLSSAASQT*LLCKTI
Trigger: TATAGTTTTACACAGGAGCAAGGTTTGTGAAGCAGC...ACTGGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAGACAGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR CAA 90 bp CCAGCAAGGCTCCAATTATGCCACCAGCCACCAGGCCACGCAGGCCTACGTTTACTAGTGTTCACTGTGTaGAATATAGTCACAAACACT +
Preference number: 5 (lower is better)
Translates to: PARLQLCHQPPGHAGLRLLVFTV*NIVTNT
Trigger: AGTGTTTGTGACTATATTCAACACAGTGAACACTAG...TAAACGTAGGCCTGCGTGGCCTGGTGGCTGGTGGCATAATTGGAGCCTTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492164.5
CDS-3UTR CAA 90 bp CTTCACAAACCTTGCTCCTGTGTAAAACTATATTCTCAGTGTAGGGCAGAGAGGGTCCCCGGCCTCGCTTaGGAGTCCTTGGAAATACGA +
Preference number: 5 (lower is better)
Translates to: LHKPCSCVKLYSQCRAERVPGLA*ESLEIR
Trigger: TCGTATTTCCAAGGACTCCAAAGCGAGGCCGGGGAC...CCTCTCTGCCCTACACTGAGAATATAGTTTTACACAGGAGCAAGGTTTGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR CAA 90 bp AGAGTGGCCTGTCTGTTGGCATTCATCGGACATGGCAGCTCCCTTCAGCTCTCCCTAGTGTTCACTGTGTaGAATATAGTCACAAACACT +
Preference number: 5 (lower is better)
Translates to: RVACLLAFIGHGSSLQLSLVFTV*NIVTNT
Trigger: AGTGTTTGTGACTATATTCAACACAGTGAACACTAG...GGAGAGCTGAAGGGAGCTGCCATGTCCGATGAATGCCAACAGACAGGCCACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000494664.6
CDS-3UTR CAA 90 bp GACATCAGCAGAGAACTGGAAAGACATAGCCAACTGCTGTTCATGTTACTCATGAGAGTGGCCTGTCTGTaGGCATTCATCGGACATGGC +
Preference number: 5 (lower is better)
Translates to: DISRELERHSQLLFMLLMRVACL*AFIGHG
Trigger: GCCATGTCCGATGAATGCCAACAGACAGGCCACTCT...CATGAGTAACATGAACAGCAGTTGGCTATGTCTTTCCAGTTCTCTGCTGATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494664.6
CDS-3UTR CAA 90 bp TTAGCTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACAGAGTGGCCTGTCTGTaGGCATTCATCGGACATGGC +
Preference number: 5 (lower is better)
Translates to: LAHGVPFDPSVFFPEQSHRVACL*AFIGHG
Trigger: GCCATGTCCGATGAATGCCAACAGACAGGCCACTCT...GTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTCCATGAGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000498399.1
CDS-3UTR CAA 90 bp AGCTCTCCAGTGAGTTTCAAGTTCAGAGCACTTTCAGTCCTTGTCTTGTTTATCAGAGTGGCCTGTCTGTaGGCATTCATCGGACATGGC +
Preference number: 5 (lower is better)
Translates to: SSPVSFKFRALSVLVLFIRVACL*AFIGHG
Trigger: GCCATGTCCGATGAATGCCAACAGACAGGCCACTCT...GATAAACAAGACAAGGACTGAAAGTGCTCTGAACTTGAAACTCACTGGAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000498399.1
CDS-3UTR CAA 90 bp CCAGTTTTAGCTCATGGAGTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGGGAGTGTTTTACTCTTaGCCAAACAGCTCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: PVLAHGVPFDPSVFFPEQGVFYS*PNSSRR
Trigger: CCTCCGGGAGCTGTTTGGCAAAGAGTAAAACACTCC...CTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498399.1
CDS-3UTR CAA 90 bp GTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACTTCTAGCACGATGTGCAGATaGCACAGCATCAAACCGGTT +
Preference number: 5 (lower is better)
Translates to: VPFDPSVFFPEQSHQSTSSTMCR*HSIKPV
Trigger: AACCGGTTTGATGCTGTGCAATCTGCACATCGTGCT...AGAAGTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264244.7
CDS-3UTR CAA 90 bp TTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACTTCTGAAATGGACCTACGGACAAACTaGAGCGCTCAGGACTTCAAG +
Preference number: 5 (lower is better)
Translates to: FDPSVFFPEQSHQSTSEMDLRTN*SAQDFK
Trigger: CTTGAAGTCCTGAGCGCTCAAGTTTGTCCGTAGGTC...CATTTCAGAAGTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000486418.5
ENST00000492164.5
CDS-3UTR CAA 90 bp CCACAGGTACCAGCACTTAAATTTGTCAGCAGGCTGACCAAAGAGTGGCCTGTCCTAGTGTTCACTGTGTaGAATATAGTCACAAACACT +
Preference number: 5 (lower is better)
Translates to: PQVPALKFVSRLTKEWPVLVFTV*NIVTNT
Trigger: AGTGTTTGTGACTATATTCAACACAGTGAACACTAG...GACAGGCCACTCTTTGGTCAGCCTGCTGACAAATTTAAGTGCTGGTACCTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000494664.6
CDS-3UTR CAA 90 bp TCGGACATGGCAGCTCCCTTCAGCTCTCCAGTGAGTTTCAAGTTCAGAGCACTTGAGCACTTTCAGTCCTaGTCTTGTTTATCTATTACT +
Preference number: 5 (lower is better)
Translates to: SDMAAPFSSPVSFKFRALEHFQS*SCLSIT
Trigger: AGTAATAGATAAACAAGACAAGGACTGAAAGTGCTC...AAGTGCTCTGAACTTGAAACTCACTGGAGAGCTGAAGGGAGCTGCCATGTCCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264244.7
ENST00000493694.1
ENST00000494664.6
ENST00000498399.1
CDS-3UTR CAA 90 bp CCACAGGTACCAGCACTTAAATTTGTCAGCAGGCTGACCAAAGAGTGGCCTGTCGAGCACTTTCAGTCCTaGTCTTGTTTATCTATTACT +
Preference number: 5 (lower is better)
Translates to: PQVPALKFVSRLTKEWPVEHFQS*SCLSIT
Trigger: AGTAATAGATAAACAAGACAAGGACTGAAAGTGCTC...GACAGGCCACTCTTTGGTCAGCCTGCTGACAAATTTAAGTGCTGGTACCTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264244.7
ENST00000494664.6
ENST00000498399.1
CDS-3UTR CAA 90 bp CAGCATCAAACCGGTTATGATAAATTTCTGCCTGGCTCTGCTCAATGTATTGTTAGGCACTTTTACTCTTaGCCAAACAGCTCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: QHQTGYDKFLPGSAQCIVRHFYS*PNSSRR
Trigger: CCTCCGGGAGCTGTTTGGCAAAGAGTAAAAGTGCCT...AACAATACATTGAGCAGAGCCAGGCAGAAATTTATCATAACCGGTTTGATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463927.6
CDS TCA 90 bp GATGCCTGCTGTAGCTGCCGTCTTACAGATATTAGCAAGGTCCTTTaGAATTCTCTGCTGTTCACTACAACATCAAAAAGACAATGTTGT +
Preference number: 5 (lower is better)
Translates to: DACCSCRLTDISKVL*NSLLFTTTSKRQCC
Trigger: ACAACATTGTCTTTTTGATGTTGTAGTGAACAGCAGAGAATTTCAAAGGACCTTGCTAATATCTGTAAGACGGCAGCTACAGCAGGCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469324.1
CDS-3UTR CAA 90 bp GTGCCTTTCGATCCTTCTGTTTTCTTTCCTGAACAGTCTCACCAGAGTACTTCTGAGCACTTTCAGTCCTaGTCTTGTTTATCTATTACT +
Preference number: 5 (lower is better)
Translates to: VPFDPSVFFPEQSHQSTSEHFQS*SCLSIT
Trigger: AGTAATAGATAAACAAGACAAGGACTGAAAGTGCTC...AGAAGTACTCTGGTGAGACTGTTCAGGAAAGAAAACAGAAGGATCGAAAGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000498399.1
CDS GCA 90 bp ACGATGTGCAGATTGCACAGCATCAAACCGGTTATGATAAATTTCTaGCTGGCTCTGCTCAATGTATTGTTGTTTAGCATGAATAAAAGC +
Preference number: 5 (lower is better)
Translates to: TMCRLHSIKPVMINF*LALLNVLLFSMNKS
Trigger: GCTTTTATTCATGCTAAACAACAATACATTGAGCAGAGCCAGGCAGAAATTTATCATAACCGGTTTGATGCTGTGCAATCTGCACATCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000494664.6
CDS GCA 90 bp CTAGTGTTCACTGTGCACAGCATCAAACCGGTTATGATAAATTTCTaGCTGGCTCTGCTCAATGTATTGTTGTTTAGCATGAATAAAAGC +
Preference number: 5 (lower is better)
Translates to: LVFTVHSIKPVMINF*LALLNVLLFSMNKS
Trigger: GCTTTTATTCATGCTAAACAACAATACATTGAGCAGAGCCAGGCAGAAATTTATCATAACCGGTTTGATGCTGTGCACAGTGAACACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469324.1
CDS-3UTR CAA 90 bp CTCTCCAGTGAGTTTCAAGTTCAGAGCACTTTCAGTCCTTGTCTTGTTTATCTAGAGCACTTTCAGTCCTaGTCTTGTTTATCTATTACT +
Preference number: 5 (lower is better)
Translates to: LSSEFQVQSTFSPCLVYLEHFQS*SCLSIT
Trigger: AGTAATAGATAAACAAGACAAGGACTGAAAGTGCTC...TAGATAAACAAGACAAGGACTGAAAGTGCTCTGAACTTGAAACTCACTGGAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000498399.1
CDS GCA 90 bp ACAACATCAAAAAGACAATGTTGTTTGGGATTAGTTTATGGACATTaGTCTCCAAGAGACTCTATAATCAGAATTAACCCAAATGCTACC +
Preference number: 5 (lower is better)
Translates to: TTSKRQCCLGLVYGH*SPRDSIIRINPNAT
Trigger: GGTAGCATTTGGGTTAATTCTGATTATAGAGTCTCTTGGAGAGCAATGTCCATAAACTAATCCCAAACAACATTGTCTTTTTGATGTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469324.1
CDS CAA 90 bp CCGGTGGCGGCACCTCCATGGCCTTCTCTCGACCTACGGACAAACTaGAGCGCTCAGGACTTCAAGTCCTCGCGGACGTGCCGCGGGAGA +
Preference number: 6 (lower is better)
Translates to: PVAAPPWPSLDLRTN*SAQDFKSSRTCRGR
Trigger: TCTCCCGCGGCACGTCCGCGAGGACTTGAAGTCCTGAGCGCTCAAGTTTGTCCGTAGGTCGAGAGAAGGCCATGGAGGTGCCGCCACCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000466984.1
ENST00000486418.5
ENST00000492164.5
ENST00000493694.1
ENST00000494664.6
CDS CCA 72 bp AGAGAAAGCTCCGCGGTGCCGGTGGCGGCACCTCCATaGCCTTCTCTCGACCTACGGACAAACTTGAGCGCT +
Preference number: 6 (lower is better)
Translates to: RESSAVPVAAPP*PSLDLRTNLSA
Trigger: AGCGCTCAAGTTTGTCCGTAGGTCGAGAGAAGGCCATGGAGGTGCCGCCACCGGCACCGCGGAGCTTTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000466984.1
ENST00000486418.5
ENST00000492164.5
ENST00000493694.1
ENST00000494664.6
CDS CCA 72 bp GCACAATGCTCTACAGAGAAAGCTCCGCGGTGCCGGTaGCGGCACCTCCATGGCCTTCTCTCGACCTACGGA +
Preference number: 6 (lower is better)
Translates to: AQCSTEKAPRCR*RHLHGLLSTYG
Trigger: TCCGTAGGTCGAGAGAAGGCCATGGAGGTGCCGCCACCGGCACCGCGGAGCTTTCTCTGTAGAGCATTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000466984.1
ENST00000486418.5
ENST00000492164.5
ENST00000493694.1
ENST00000494664.6
CDS CCA 72 bp GAGGCGGTCCCATCCAGATTCCGGGTAATAGGGCTCTaGGACGTAGGGAAGCCGCTTCTGACGCTCCTCAAG +
Preference number: 6 (lower is better)
Translates to: EAVPSRFRVIGL*DVGKPLLTLLK
Trigger: CTTGAGGAGCGTCAGAAGCGGCTTCCCTACGTCCCAGAGCCCTATTACCCGGAATCTGGATGGGACCGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000466984.1
ENST00000486418.5
ENST00000492164.5
ENST00000493694.1
ENST00000494664.6
ENST00000498399.1
CDS TCA 72 bp CGCGGACGTGCCGCGGGAGAGCGTAACTGTACGAGGTaGGAATCCGTGCATTTGACCCAGGTTAACCCTCTG +
Preference number: 6 (lower is better)
Translates to: RGRAAGERNCTR*ESVHLTQVNPL
Trigger: CAGAGGGTTAACCTGGGTCAAATGCACGGATTCTCACCTCGTACAGTTACGCTCTCCCGCGGCACGTCCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000466984.1
ENST00000486418.5
ENST00000492164.5
ENST00000493694.1
ENST00000494664.6
CDS TCA 72 bp CACCTCCATGGCCTTCTCTCGACCTACGGACAAACTTaGGCGCTCAGGACTTCAAGTCCTCGCGGACGTGCC +
Preference number: 6 (lower is better)
Translates to: HLHGLLSTYGQT*ALRTSSPRGRA
Trigger: GGCACGTCCGCGAGGACTTGAAGTCCTGAGCGCTCAAGTTTGTCCGTAGGTCGAGAGAAGGCCATGGAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000466984.1
ENST00000486418.5
ENST00000492164.5
ENST00000493694.1
ENST00000494664.6
CDS CAA 72 bp GCACCTCCATGGCCTTCTCTCGACCTACGGACAAACTaGAGCGCTCAGGACTTCAAGTCCTCGCGGACGTGC +
Preference number: 6 (lower is better)
Translates to: APPWPSLDLRTN*SAQDFKSSRTC
Trigger: GCACGTCCGCGAGGACTTGAAGTCCTGAGCGCTCAAGTTTGTCCGTAGGTCGAGAGAAGGCCATGGAGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000466984.1
ENST00000486418.5
ENST00000492164.5
ENST00000493694.1
ENST00000494664.6
CDS TCA 72 bp CTGCAGTTCTCCAACCCCAGCGCCAGCCATAACGAATaGAGCCTCGTGTGGCAGCACGATGTGCAGATTGCA +
Preference number: 6 (lower is better)
Translates to: LQFSNPSASHNE*SLVWQHDVQIA
Trigger: TGCAATCTGCACATCGTGCTGCCACACGAGGCTTCATTCGTTATGGCTGGCGCTGGGGTTGGAGAACTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000494664.6
CDS TCA 72 bp CTGCAGTTCTCCAACCCCAGCGCCAGCCATAACGAATaGAGCCTCGTGTGGCAGCACGATGTGCAGATTGTC +
Preference number: 6 (lower is better)
Translates to: LQFSNPSASHNE*SLVWQHDVQIV
Trigger: GACAATCTGCACATCGTGCTGCCACACGAGGCTTCATTCGTTATGGCTGGCGCTGGGGTTGGAGAACTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492164.5
CDS TCA 72 bp GAGAGCGTAACTGTACGAGGTGAGAATCCGTGCATTTaGCCCAGGTTAACCCTCTGCCAGAGGGCTCGACAC +
Preference number: 6 (lower is better)
Translates to: ESVTVRGENPCI*PRLTLCQRARH
Trigger: GTGTCGAGCCCTCTGGCAGAGGGTTAACCTGGGTCAAATGCACGGATTCTCACCTCGTACAGTTACGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264244.7
ENST00000463927.6
ENST00000466984.1
ENST00000486418.5
ENST00000492164.5
ENST00000493694.1
ENST00000494664.6
CDS CAA 72 bp GAAATTCTCTGCTGTTCACCTAGGCACTTTTACTCTTaGCCAAACAGCTCCCGGAGGCGGTCCCATCCAGAT +
Preference number: 6 (lower is better)
Translates to: EILCCSPRHFYS*PNSSRRRSHPD
Trigger: ATCTGGATGGGACCGCCTCCGGGAGCTGTTTGGCAAAGAGTAAAAGTGCCTAGGTGAACAGCAGAGAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463927.6
CDS GCA 72 bp AAATTCTCTGCTGTTCACCTAGGCACTTTTACTCTTTaGCAAACAGCTCCCGGAGGCGGTCCCATCCAGATT +
Preference number: 6 (lower is better)
Translates to: KFSAVHLGTFTL*QTAPGGGPIQI
Trigger: AATCTGGATGGGACCGCCTCCGGGAGCTGTTTGGCAAAGAGTAAAAGTGCCTAGGTGAACAGCAGAGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463927.6
CDS GCA 72 bp ACTGTGCACAGCATCAAACCGGTTATGATAAATTTCTaGCTGGCTCTGCTCAATGTATTGTTGTTTAGCATG +
Preference number: 6 (lower is better)
Translates to: TVHSIKPVMINF*LALLNVLLFSM
Trigger: CATGCTAAACAACAATACATTGAGCAGAGCCAGGCAGAAATTTATCATAACCGGTTTGATGCTGTGCACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469324.1
CDS GCA 72 bp AGATTGCACAGCATCAAACCGGTTATGATAAATTTCTaGCTGGCTCTGCTCAATGTATTGTTGTTTAGCATG +
Preference number: 6 (lower is better)
Translates to: RLHSIKPVMINF*LALLNVLLFSM
Trigger: CATGCTAAACAACAATACATTGAGCAGAGCCAGGCAGAAATTTATCATAACCGGTTTGATGCTGTGCAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264244.7
ENST00000494664.6
CDS TCA 72 bp TGTAGCTGCCGTCTTACAGATATTAGCAAGGTCCTTTaGAATTCTCTGCTGTTCACTACAACATCAAAAAGA +
Preference number: 6 (lower is better)
Translates to: CSCRLTDISKVL*NSLLFTTTSKR
Trigger: TCTTTTTGATGTTGTAGTGAACAGCAGAGAATTTCAAAGGACCTTGCTAATATCTGTAAGACGGCAGCTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469324.1
CDS CAA 90 bp CCTTTGAAATTCTCTGCTGTTCACTACAACATCAAAAAGACAATGTaGTTTGGGATTAGTTTATGGACATTGCTCTCCAAGAGACTCTAT +
Preference number: 6 (lower is better)
Translates to: PLKFSAVHYNIKKTM*FGISLWTLLSKRLY
Trigger: ATAGAGTCTCTTGGAGAGCAATGTCCATAAACTAATCCCAAACAACATTGTCTTTTTGATGTTGTAGTGAACAGCAGAGAATTTCAAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469324.1
CDS GCA 72 bp AAAAGACAATGTTGTTTGGGATTAGTTTATGGACATTaGTCTCCAAGAGACTCTATAATCAGAATTAACCCA +
Preference number: 6 (lower is better)
Translates to: KRQCCLGLVYGH*SPRDSIIRINP
Trigger: TGGGTTAATTCTGATTATAGAGTCTCTTGGAGAGCAATGTCCATAAACTAATCCCAAACAACATTGTCTTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469324.1