RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TIGIT (Homo sapiens)

Ensembl gene IDs: ENSG00000181847

Ensembl transcript IDs: ENST00000383671.8, ENST00000461158.5, ENST00000481065.5, ENST00000484319.1, ENST00000485814.1, ENST00000486257.5, ENST00000496848.1

Found 407 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCAAATGCTACGACTTGGCTCCCTGTGTGGGCATGTGCGTTTCCTaGGGCTTCCCCAGCACACACGGCCGGAAGAGGCTACAGGCCTGT +
Preference number: 1 (lower is better)
Translates to: PKCYDLAPCVGMCVS*GFPSTHGRKRLQAC
Trigger: ACAGGCCTGTAGCCTCTTCCGGCCGTGTGTGCTGGGGAAGCCCCAGGAAACGCACATGCCCACACAGGGAGCCAAGTCGTAGCATTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR GCA 90 bp AGATCAAGGCCCAAATGCTACGACTTGGCTCCCTGTGTGGGCATGTaGGTTTCCTGGGGCTTCCCCAGCACACACGGCCGGAAGAGGCTA +
Preference number: 1 (lower is better)
Translates to: RSRPKCYDLAPCVGM*VSWGFPSTHGRKRL
Trigger: TAGCCTCTTCCGGCCGTGTGTGCTGGGGAAGCCCCAGGAAACGCACATGCCCACACAGGGAGCCAAGTCGTAGCATTTGGGCCTTGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR GCA 90 bp ACATCCCCTTGGTGCTCCCAGGCCACTTCATCACAGATAAGCCTATaGCAACTACCTCACCCCAAACTGTCGTCTCTTCCTGAAGGCCTG +
Preference number: 1 (lower is better)
Translates to: TSPWCSQATSSQISL*QLPHPKLSSLPEGL
Trigger: CAGGCCTTCAGGAAGAGACGACAGTTTGGGGTGAGGTAGTTGGCATAGGCTTATCTGTGATGAAGTGGCCTGGGAGCACCAAGGGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR GCA 90 bp GACAAAACTCCTGCTCCTCCCAGACTAGCCTCAACATCCCCTTGGTaGTCCCAGGCCACTTCATCACAGATAAGCCTATGCCAACTACCT +
Preference number: 1 (lower is better)
Translates to: DKTPAPPRLASTSPW*SQATSSQISLCQLP
Trigger: AGGTAGTTGGCATAGGCTTATCTGTGATGAAGTGGCCTGGGAGCACCAAGGGGATGTTGAGGCTAGTCTGGGAGGAGCAGGAGTTTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR GCA 90 bp CTTTCAGCTCCAAGAATTTCCTACAAGTTCCCTAGACAAAACTCCTaGTCCTCCCAGACTAGCCTCAACATCCCCTTGGTGCTCCCAGGC +
Preference number: 1 (lower is better)
Translates to: LSAPRISYKFPRQNS*SSQTSLNIPLVLPG
Trigger: GCCTGGGAGCACCAAGGGGATGTTGAGGCTAGTCTGGGAGGAGCAGGAGTTTTGTCTAGGGAACTTGTAGGAAATTCTTGGAGCTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR CCA 90 bp CTAGACAAAACTCCTGCTCCTCCCAGACTAGCCTCAACATCCCCTTaGTGCTCCCAGGCCACTTCATCACAGATAAGCCTATGCCAACTA +
Preference number: 1 (lower is better)
Translates to: LDKTPAPPRLASTSP*CSQATSSQISLCQL
Trigger: TAGTTGGCATAGGCTTATCTGTGATGAAGTGGCCTGGGAGCACCAAGGGGATGTTGAGGCTAGTCTGGGAGGAGCAGGAGTTTTGTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR TCA 90 bp CACGGCCGGAAGAGGCTACAGGCCTGTATCAGGCTGTCTAATGGATaGGTATGTCACAGCAAAAGGAAACTTGAAATGCCTGCCCAGAGA +
Preference number: 1 (lower is better)
Translates to: HGRKRLQACIRLSNG*VCHSKRKLEMPAQR
Trigger: TCTCTGGGCAGGCATTTCAAGTTTCCTTTTGCTGTGACATACTCATCCATTAGACAGCCTGATACAGGCCTGTAGCCTCTTCCGGCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR TCA 90 bp AGGAAACTTGAAATGCCTGCCCAGAGAATAAAATCTGAAGTTTGCTaGCTCCCTTGGTGCCAGGGCCTTCTTTGTGGGACTTTCAGCTCC +
Preference number: 1 (lower is better)
Translates to: RKLEMPAQRIKSEVC*LPWCQGLLCGTFSS
Trigger: GGAGCTGAAAGTCCCACAAAGAAGGCCCTGGCACCAAGGGAGTCAGCAAACTTCAGATTTTATTCTCTGGGCAGGCATTTCAAGTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR CCA 90 bp CCATGCGCAAGACACAACCTTGCTTCACATTCTCTTTCAGTTCCTTaGCCCATGAAAGAAAATCAGTCACCAGTAAATCCAACCTCCCCG +
Preference number: 1 (lower is better)
Translates to: PCARHNLASHSLSVP*PMKENQSPVNPTSP
Trigger: CGGGGAGGTTGGATTTACTGGTGACTGATTTTCTTTCATGGGCCAAGGAACTGAAAGAGAATGTGAAGCAAGGTTGTGTCTTGCGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR TCA 90 bp GATAAGCCTATGCCAACTACCTCACCCCAAACTGTCGTCTCTTCCTaGAGGCCTGTGTATGTCTCCTTCTCTCCTTACTATAATACCTTT +
Preference number: 1 (lower is better)
Translates to: DKPMPTTSPQTVVSS*RPVYVSFSPYYNTF
Trigger: AAAGGTATTATAGTAAGGAGAGAAGGAGACATACACAGGCCTTCAGGAAGAGACGACAGTTTGGGGTGAGGTAGTTGGCATAGGCTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR GCA 90 bp AAGCAGGACAATGCTTTATTTTTAACCATGCGCAAGACACAACCTTaGTTCACATTCTCTTTCAGTTCCTTGGCCCATGAAAGAAAATCA +
Preference number: 1 (lower is better)
Translates to: KQDNALFLTMRKTQP*FTFSFSSLAHERKS
Trigger: TGATTTTCTTTCATGGGCCAAGGAACTGAAAGAGAATGTGAAGCAAGGTTGTGTCTTGCGCATGGTTAAAAATAAAGCATTGTCCTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR TCA 90 bp ATGTGCGTTTCCTGGGGCTTCCCCAGCACACACGGCCGGAAGAGGCTACAGGCCAAATGCTGGCCATTATaGGGAATGTGTCTCTCAGAG +
Preference number: 2 (lower is better)
Translates to: MCVSWGFPSTHGRKRLQAKCWPL*GMCLSE
Trigger: CTCTGAGAGACACATTCCTCATAATGGCCAGCATTT...GGCCTGTAGCCTCTTCCGGCCGTGTGTGCTGGGGAAGCCCCAGGAAACGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR CAA 90 bp CCTAGACAAAACTCCTGCTCCTCCCAGACTAGCCTCAACATCCCCTaGGTGCTCCCAGGCCACTTCATCACAGATAAGCCTATGCCAACT +
Preference number: 2 (lower is better)
Translates to: PRQNSCSSQTSLNIP*VLPGHFITDKPMPT
Trigger: AGTTGGCATAGGCTTATCTGTGATGAAGTGGCCTGGGAGCACCAAGGGGATGTTGAGGCTAGTCTGGGAGGAGCAGGAGTTTTGTCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR TCA 90 bp TACGTGGTGGATAGCGCATGTCTCCAGGAATCCAACTATGAAATGGTCTTCTCTACACACACGCAGCACTaGTGGAGAGTACAGCTGCTT +
Preference number: 2 (lower is better)
Translates to: YVVDSACLQESNYEMVFSTHTQH*WRVQLL
Trigger: AAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGT...AGAGAAGACCATTTCATAGTTGGATTCCTGGAGACATGCGCTATCCACCACGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR CCA 90 bp TACGTGGTGGATAGCGCATGTCTCCAGGAATCCAACTATGAAATGGTCTTCTCTCCAAATGCTACGACTTaGCTCCCTGTGTGGGCATGT +
Preference number: 2 (lower is better)
Translates to: YVVDSACLQESNYEMVFSPNATT*LPVWAC
Trigger: ACATGCCCACACAGGGAGCCAAGTCGTAGCATTTGG...AGAGAAGACCATTTCATAGTTGGATTCCTGGAGACATGCGCTATCCACCACGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR CCA 90 bp TACGTGGTGGATAGCGCATGTCTCCAGGAATCCAACTATGAAATGGTCTTCTCTCCAGGGCCTTCTTTGTaGGACTTTCAGCTCCAAGAA +
Preference number: 2 (lower is better)
Translates to: YVVDSACLQESNYEMVFSPGPSL*DFQLQE
Trigger: TTCTTGGAGCTGAAAGTCCCACAAAGAAGGCCCTGG...AGAGAAGACCATTTCATAGTTGGATTCCTGGAGACATGCGCTATCCACCACGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR CCA 90 bp TCATCTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCATTGGCATGTGCGTTTCCTaGGGCTTCCCCAGCACACAC +
Preference number: 2 (lower is better)
Translates to: SSNLSSKGLGALDRFQFIGMCVS*GFPSTH
Trigger: GTGTGTGCTGGGGAAGCCCCAGGAAACGCACATGCC...AATGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR CAA 90 bp ACCATGCGCAAGACACAACCTTGCTTCACATTCTCTTTCAGTTCCTaGGCCCATGAAAGAAAATCAGTCACCAGTAAATCCAACCTCCCC +
Preference number: 2 (lower is better)
Translates to: TMRKTQPCFTFSFSS*AHERKSVTSKSNLP
Trigger: GGGGAGGTTGGATTTACTGGTGACTGATTTTCTTTCATGGGCCAAGGAACTGAAAGAGAATGTGAAGCAAGGTTGTGTCTTGCGCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR TCA 90 bp ACAGAAATAAGCGGTTCAGTTACCCCAACCCCAGCACAAAGTCGTCAGGGAGTGCTGCCTTTGAATGAGTaGAAGTTACTGAAAATGACG +
Preference number: 2 (lower is better)
Translates to: TEISGSVTPTPAQSRQGVLPLNE*KLLKMT
Trigger: CGTCATTTTCAGTAACTTTCACTCATTCAAAGGCAG...CACTCCCTGACGACTTTGTGCTGGGGTTGGGGTAACTGAACCGCTTATTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR TCA 90 bp CTTGCTTCACATTCTCTTTCAGTTCCTTGGCCCATGAAAGAAAATCAGTCACCAAAATCTGAAGTTTGCTaGCTCCCTTGGTGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: LASHSLSVPWPMKENQSPKSEVC*LPWCQG
Trigger: GCCCTGGCACCAAGGGAGTCAGCAAACTTCAGATTT...TGGTGACTGATTTTCTTTCATGGGCCAAGGAACTGAAAGAGAATGTGAAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR TCA 90 bp GCCCATGAAAGAAAATCAGTCACCAGTAAATCCAACCTCCCCGCTCATTCCTCTAGGCTGTCTAATGGATaGGTATGTCACAGCAAAAGG +
Preference number: 2 (lower is better)
Translates to: AHERKSVTSKSNLPAHSSRLSNG*VCHSKR
Trigger: CCTTTTGCTGTGACATACTCATCCATTAGACAGCCT...AGAGGAATGAGCGGGGAGGTTGGATTTACTGGTGACTGATTTTCTTTCATGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR TCA 90 bp AACAGAAATAAGCGGTTCAGTTACCCCAACCCCAGCACAAAGTCGTCAGGGAGTGGCTCAAGAGTGTATTaGTGCAGAAAAGGTAGATCA +
Preference number: 2 (lower is better)
Translates to: NRNKRFSYPNPSTKSSGSGSRVY*CRKGRS
Trigger: TGATCTACCTTTTCTGCATCAATACACTCTTGAGCC...ACTCCCTGACGACTTTGTGCTGGGGTTGGGGTAACTGAACCGCTTATTTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR TCA 90 bp GTTCATCTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCACCCCGCTCATTCCTCTaGGAGAGATGGTGGAAGGAT +
Preference number: 2 (lower is better)
Translates to: VHLIFLPKDLELWTDFSSPRSFL*ERWWKD
Trigger: ATCCTTCCACCATCTCTCTCAGAGGAATGAGCGGGG...TGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAGATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR GCA 90 bp CTTGCTTCACATTCTCTTTCAGTTCCTTGGCCCATGAAAGAAAATCAGTCACCATCAACATCCCCTTGGTaGTCCCAGGCCACTTCATCA +
Preference number: 2 (lower is better)
Translates to: LASHSLSVPWPMKENQSPSTSPW*SQATSS
Trigger: TGATGAAGTGGCCTGGGAGCACCAAGGGGATGTTGA...TGGTGACTGATTTTCTTTCATGGGCCAAGGAACTGAAAGAGAATGTGAAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR TCA 90 bp TCATCTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCATTACTGTCGTCTCTTCCTaGAGGCCTGTGTATGTCTCC +
Preference number: 2 (lower is better)
Translates to: SSNLSSKGLGALDRFQFITVVSS*RPVYVS
Trigger: GGAGACATACACAGGCCTTCAGGAAGAGACGACAGT...AATGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR TCA 90 bp TCATCTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCATTAAATCTGAAGTTTGCTaGCTCCCTTGGTGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: SSNLSSKGLGALDRFQFIKSEVC*LPWCQG
Trigger: GCCCTGGCACCAAGGGAGTCAGCAAACTTCAGATTT...AATGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR TCA 90 bp TACGTGGTGGATAGCGCATGTCTCCAGGAATCCAACTATGAAATGGTCTTCTCTCCAGAGAATAAAATCTaGAGTTTGCTGACTCCCTTG +
Preference number: 2 (lower is better)
Translates to: YVVDSACLQESNYEMVFSPENKI*SLLTPL
Trigger: CAAGGGAGTCAGCAAACTTCAGATTTTATTCTCTGG...AGAGAAGACCATTTCATAGTTGGATTCCTGGAGACATGCGCTATCCACCACGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR TCA 90 bp ATAATTATGTTAAATAACACCCAACTCTCAGTCCAACCTCTGCCGAATATACACCCCCGCTCATTCCTCTaGGAGAGATGGTGGAAGGAT +
Preference number: 2 (lower is better)
Translates to: IIMLNNTQLSVQPLPNIHPRSFL*ERWWKD
Trigger: ATCCTTCCACCATCTCTCTCAGAGGAATGAGCGGGG...GTGTATATTCGGCAGAGGTTGGACTGAGAGTTGGGTGTTATTTAACATAATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR GCA 90 bp TCATCTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCATTCCTAGACAAAACTCCTaGTCCTCCCAGACTAGCCTC +
Preference number: 2 (lower is better)
Translates to: SSNLSSKGLGALDRFQFIPRQNS*SSQTSL
Trigger: GAGGCTAGTCTGGGAGGAGCAGGAGTTTTGTCTAGG...AATGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR GCA 90 bp CTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCATTCTTCAGATCAAGGCCCAAATaGTACGACTTGGCTCCCTGT +
Preference number: 2 (lower is better)
Translates to: LIFLPKDLELWTDFSSFFRSRPK*YDLAPC
Trigger: ACAGGGAGCCAAGTCGTAGCATTTGGGCCTTGATCT...GAAGAATGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR TCA 90 bp CTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCATTCTTCAGGCTGTCTAATGGATaGGTATGTCACAGCAAAAGG +
Preference number: 2 (lower is better)
Translates to: LIFLPKDLELWTDFSSFFRLSNG*VCHSKR
Trigger: CCTTTTGCTGTGACATACTCATCCATTAGACAGCCT...GAAGAATGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR GCA 90 bp GTTCATCTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCATCACAGATAAGCCTATaGCAACTACCTCACCCCAAA +
Preference number: 2 (lower is better)
Translates to: VHLIFLPKDLELWTDFSSSQISL*QLPHPK
Trigger: TTTGGGGTGAGGTAGTTGGCATAGGCTTATCTGTGA...TGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAGATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR TCA 90 bp CTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCATTCTTCAAAGTCGTCAGGGAGTaGATAAAAGGGTTCGAAGAA +
Preference number: 2 (lower is better)
Translates to: LIFLPKDLELWTDFSSFFKVVRE*IKGFEE
Trigger: TTCTTCGAACCCTTTTATTCACTCCCTGACGACTTT...GAAGAATGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR TCA 90 bp CTTGCTTCACATTCTCTTTCAGTTCCTTGGCCCATGAAAGAAAATCAGTCACCAATTTATTCACTCAACTaGACACACACACACATACAC +
Preference number: 2 (lower is better)
Translates to: LASHSLSVPWPMKENQSPIYSLN*THTHIH
Trigger: GTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAAT...TGGTGACTGATTTTCTTTCATGGGCCAAGGAACTGAAAGAGAATGTGAAGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR CCA 90 bp GTTCATCTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCATGCCATAATGCAAAATaGAATAGAACGAAAAGGCCA +
Preference number: 2 (lower is better)
Translates to: VHLIFLPKDLELWTDFSSCHNAK*NRTKRP
Trigger: TGGCCTTTTCGTTCTATTCCATTTTGCATTATGGCA...TGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAGATGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR CAA 90 bp ATGTGCGTTTCCTGGGGCTTCCCCAGCACACACGGCCGGAAGAGGCTACAGGCCAGCCTCAACATCCCCTaGGTGCTCCCAGGCCACTTC +
Preference number: 3 (lower is better)
Translates to: MCVSWGFPSTHGRKRLQASLNIP*VLPGHF
Trigger: GAAGTGGCCTGGGAGCACCAAGGGGATGTTGAGGCT...GGCCTGTAGCCTCTTCCGGCCGTGTGTGCTGGGGAAGCCCCAGGAAACGCACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR CCA 72 bp TACGACTTGGCTCCCTGTGTGGGCATGTGCGTTTCCTaGGGCTTCCCCAGCACACACGGCCGGAAGAGGCTA +
Preference number: 3 (lower is better)
Translates to: YDLAPCVGMCVS*GFPSTHGRKRL
Trigger: TAGCCTCTTCCGGCCGTGTGTGCTGGGGAAGCCCCAGGAAACGCACATGCCCACACAGGGAGCCAAGTCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR GCA 72 bp CCTGCTCCTCCCAGACTAGCCTCAACATCCCCTTGGTaGTCCCAGGCCACTTCATCACAGATAAGCCTATGC +
Preference number: 3 (lower is better)
Translates to: PAPPRLASTSPW*SQATSSQISLC
Trigger: GCATAGGCTTATCTGTGATGAAGTGGCCTGGGAGCACCAAGGGGATGTTGAGGCTAGTCTGGGAGGAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR CCA 72 bp GCAGAAAAGGTAGATCAAGGCCCAAATGCTACGACTTaGCTCCCTGTGTGGGCATGTGCGTTTCCTGGGGCT +
Preference number: 3 (lower is better)
Translates to: AEKVDQGPNATT*LPVWACAFPGA
Trigger: AGCCCCAGGAAACGCACATGCCCACACAGGGAGCCAAGTCGTAGCATTTGGGCCTTGATCTACCTTTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR CAA 90 bp ATGTGCGTTTCCTGGGGCTTCCCCAGCACACACGGCCGGAAGAGGCTACAGGCCCTTTTCATGACAACATaGTCTCCCCATTTAACTGTA +
Preference number: 3 (lower is better)
Translates to: MCVSWGFPSTHGRKRLQALFMTT*SPHLTV
Trigger: TACAGTTAAATGGGGAGACAATGTTGTCATGAAAAG...GGCCTGTAGCCTCTTCCGGCCGTGTGTGCTGGGGAAGCCCCAGGAAACGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR CAA 90 bp AACAGAAATAAGCGGTTCAGTTACCCCAACCCCAGCACAAAGTCGTCAGGGAGTCCCAAATGCTACGACTaGGCTCCCTGTGTGGGCATG +
Preference number: 3 (lower is better)
Translates to: NRNKRFSYPNPSTKSSGSPKCYD*APCVGM
Trigger: CATGCCCACACAGGGAGCCAAGTCGTAGCATTTGGG...ACTCCCTGACGACTTTGTGCTGGGGTTGGGGTAACTGAACCGCTTATTTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR GCA 72 bp TGGTGCTCCCAGGCCACTTCATCACAGATAAGCCTATaGCAACTACCTCACCCCAAACTGTCGTCTCTTCCT +
Preference number: 3 (lower is better)
Translates to: WCSQATSSQISL*QLPHPKLSSLP
Trigger: AGGAAGAGACGACAGTTTGGGGTGAGGTAGTTGGCATAGGCTTATCTGTGATGAAGTGGCCTGGGAGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR CAA 90 bp TCCTGCTCCTCCCAGACTAGCCTCAACATCCCCTTGGTGCTCCCAGGCCACTTCTTTAACTGTAAGTTCTaGAGGGCAGATACCAAGATT +
Preference number: 3 (lower is better)
Translates to: SCSSQTSLNIPLVLPGHFFNCKF*RADTKI
Trigger: AATCTTGGTATCTGCCCTCAAGAACTTACAGTTAAA...GAAGTGGCCTGGGAGCACCAAGGGGATGTTGAGGCTAGTCTGGGAGGAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR CCA 72 bp GTGGTTGATGGCCACATGTGGAAAGTGGCTACGTGGTaGATAGCGCATGTCTCCAGGAATCCAACTATGAAA +
Preference number: 3 (lower is better)
Translates to: VVDGHMWKVATW*IAHVSRNPTMK
Trigger: TTTCATAGTTGGATTCCTGGAGACATGCGCTATCCACCACGTAGCCACTTTCCACATGTGGCCATCAACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR TCA 72 bp ATGCCAACTACCTCACCCCAAACTGTCGTCTCTTCCTaGAGGCCTGTGTATGTCTCCTTCTCTCCTTACTAT +
Preference number: 3 (lower is better)
Translates to: MPTTSPQTVVSS*RPVYVSFSPYY
Trigger: ATAGTAAGGAGAGAAGGAGACATACACAGGCCTTCAGGAAGAGACGACAGTTTGGGGTGAGGTAGTTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR CAA 90 bp ATAATTATGTTAAATAACACCCAACTCTCAGTCCAACCTCTGCCGAATATACACCCCAAATGCTACGACTaGGCTCCCTGTGTGGGCATG +
Preference number: 3 (lower is better)
Translates to: IIMLNNTQLSVQPLPNIHPKCYD*APCVGM
Trigger: CATGCCCACACAGGGAGCCAAGTCGTAGCATTTGGG...GTGTATATTCGGCAGAGGTTGGACTGAGAGTTGGGTGTTATTTAACATAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR TCA 72 bp AAGAGGCTACAGGCCTGTATCAGGCTGTCTAATGGATaGGTATGTCACAGCAAAAGGAAACTTGAAATGCCT +
Preference number: 3 (lower is better)
Translates to: KRLQACIRLSNG*VCHSKRKLEMP
Trigger: AGGCATTTCAAGTTTCCTTTTGCTGTGACATACTCATCCATTAGACAGCCTGATACAGGCCTGTAGCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR CCA 72 bp GTTCATCTAATCTTTCTTCCAAAGGACTTGGAGCTCTaGACAGATTTCAGTTCATTCTTCCTATGTAACCCA +
Preference number: 3 (lower is better)
Translates to: VHLIFLPKDLEL*TDFSSFFLCNP
Trigger: TGGGTTACATAGGAAGAATGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAGATGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR CAA 90 bp CTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCATTCTTCCTTTTCATGACAACATaGTCTCCCCATTTAACTGTA +
Preference number: 3 (lower is better)
Translates to: LIFLPKDLELWTDFSSFFLFMTT*SPHLTV
Trigger: TACAGTTAAATGGGGAGACAATGTTGTCATGAAAAG...GAAGAATGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR-3UTR CAA 90 bp ATAATTATGTTAAATAACACCCAACTCTCAGTCCAACCTCTGCCGAATATACACTTTAACTGTAAGTTCTaGAGGGCAGATACCAAGATT +
Preference number: 3 (lower is better)
Translates to: IIMLNNTQLSVQPLPNIHFNCKF*RADTKI
Trigger: AATCTTGGTATCTGCCCTCAAGAACTTACAGTTAAA...GTGTATATTCGGCAGAGGTTGGACTGAGAGTTGGGTGTTATTTAACATAATTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp ATGTGCGTTTCCTGGGGCTTCCCCAGCACACACGGCCGGAAGAGGCTACAGGCCACAGAGCCCAGCAGGTaGAGCTTCTGCCTGGACACA +
Preference number: 4 (lower is better)
Translates to: MCVSWGFPSTHGRKRLQATEPSR*SFCLDT
Trigger: TGTGTCCAGGCAGAAGCTGCACCTGCTGGGCTCTGT...GGCCTGTAGCCTCTTCCGGCCGTGTGTGCTGGGGAAGCCCCAGGAAACGCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp ATGTGCGTTTCCTGGGGCTTCCCCAGCACACACGGCCGGAAGAGGCTACAGGCCTGCTCCCAGTTGACCTaGGTCACTTGTGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: MCVSWGFPSTHGRKRLQACSQLT*VTCAVV
Trigger: CACCACGGCACAAGTGACCCAGGTCAACTGGGAGCA...GGCCTGTAGCCTCTTCCGGCCGTGTGTGCTGGGGAAGCCCCAGGAAACGCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp TCCTGCTCCTCCCAGACTAGCCTCAACATCCCCTTGGTGCTCCCAGGCCACTTCGGAGACACCAGCGCATaGTTCTGCCCAGAGGGCCTA +
Preference number: 4 (lower is better)
Translates to: SCSSQTSLNIPLVLPGHFGDTSA*FCPEGL
Trigger: TAGGCCCTCTGGGCAGAAGCATGCGCTGGTGTCTCC...GAAGTGGCCTGGGAGCACCAAGGGGATGTTGAGGCTAGTCTGGGAGGAGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp AACAGAAATAAGCGGTTCAGTTACCCCAACCCCAGCACAAAGTCGTCAGGGAGTTCAGCGACTGGAGGGTaGGGCCCAGGCCGGGACCTG +
Preference number: 4 (lower is better)
Translates to: NRNKRFSYPNPSTKSSGSSATGG*GPGRDL
Trigger: CAGGTCCCGGCCTGGGCCTCACCCTCCAGTCGCTGA...ACTCCCTGACGACTTTGTGCTGGGGTTGGGGTAACTGAACCGCTTATTTCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATACCGCCCTGCGCCCTGTaGAAGTCCCGGGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYIPPCAL*KSRASR
Trigger: GCGGCTGGCCCGGGACTTTCACAGGGCGCAGGGCGG...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR GCA 90 bp ATGTGCGTTTCCTGGGGCTTCCCCAGCACACACGGCCGGAAGAGGCTACAGGCCAGATCAAGGCCCAAATaGTACGACTTGGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: MCVSWGFPSTHGRKRLQARSRPK*YDLAPC
Trigger: ACAGGGAGCCAAGTCGTAGCATTTGGGCCTTGATCT...GGCCTGTAGCCTCTTCCGGCCGTGTGTGCTGGGGAAGCCCCAGGAAACGCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp TCCTGCTCCTCCCAGACTAGCCTCAACATCCCCTTGGTGCTCCCAGGCCACTTCGGGTCACTTGTGCCGTaGTGGAGGAGAGGTGACATT +
Preference number: 4 (lower is better)
Translates to: SCSSQTSLNIPLVLPGHFGSLVP*WRRGDI
Trigger: AATGTCACCTCTCCTCCACCACGGCACAAGTGACCC...GAAGTGGCCTGGGAGCACCAAGGGGATGTTGAGGCTAGTCTGGGAGGAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp ATGTGCGTTTCCTGGGGCTTCCCCAGCACACACGGCCGGAAGAGGCTACAGGCCCCAGGGCCTTCTTTGTaGGACTTTCAGCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: MCVSWGFPSTHGRKRLQAPGPSL*DFQLQE
Trigger: TTCTTGGAGCTGAAAGTCCCACAAAGAAGGCCCTGG...GGCCTGTAGCCTCTTCCGGCCGTGTGTGCTGGGGAAGCCCCAGGAAACGCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp ATGTGCGTTTCCTGGGGCTTCCCCAGCACACACGGCCGGAAGAGGCTACAGGCCCAGCTGATTTTCTCCTaGGGTCACCTTCCACAGAAT +
Preference number: 4 (lower is better)
Translates to: MCVSWGFPSTHGRKRLQAQLIFS*GHLPQN
Trigger: ATTCTGTGGAAGGTGACCTCAGGAGAAAATCAGCTG...GGCCTGTAGCCTCTTCCGGCCGTGTGTGCTGGGGAAGCCCCAGGAAACGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp TCCTGCTCCTCCCAGACTAGCCTCAACATCCCCTTGGTGCTCCCAGGCCACTTCTTCCTCCTGTCCAGCTaGTTTTCTCCTGAGGTCACC +
Preference number: 4 (lower is better)
Translates to: SCSSQTSLNIPLVLPGHFFLLSS*FSPEVT
Trigger: GGTGACCTCAGGAGAAAATCAGCTGGACAGGAGGAA...GAAGTGGCCTGGGAGCACCAAGGGGATGTTGAGGCTAGTCTGGGAGGAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp TCCTGCTCCTCCCAGACTAGCCTCAACATCCCCTTGGTGCTCCCAGGCCACTTCACACACACGCAGCACTaGTGGAGAGTACAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SCSSQTSLNIPLVLPGHFTHTQH*WRVQLL
Trigger: AAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGT...GAAGTGGCCTGGGAGCACCAAGGGGATGTTGAGGCTAGTCTGGGAGGAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTTCACGGTCAGCGACTaGAGGGTGAGGCCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSFTVSD*RVRPRP
Trigger: CGGCCTGGGCCTCACCCTCCAGTCGCTGACCGTGAA...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR TCA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTCAGCGACTGGAGGGTaGGGCCCAGGCCGGGACCTG +
Preference number: 4 (lower is better)
Translates to: HTHTHAALMESTAAYIFISATGG*GPGRDL
Trigger: CAGGTCCCGGCCTGGGCCTCACCCTCCAGTCGCTGA...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR TCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCCTCCCCGGGCCACCCTaGGCTTTTAAGGCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSLPGPP*AFKASQ
Trigger: CTGACTGGCCTTAAAAGCTCAGGGTGGCCCGGGGAG...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR GCA 90 bp ATGTGCGTTTCCTGGGGCTTCCCCAGCACACACGGCCGGAAGAGGCTACAGGCCGTATCTTCCAGAAGATaGCTCTGGTTGCTAACCAGT +
Preference number: 4 (lower is better)
Translates to: MCVSWGFPSTHGRKRLQAVSSRR*LWLLTS
Trigger: ACTGGTTAGCAACCAGAGGCATCTTCTGGAAGATAC...GGCCTGTAGCCTCTTCCGGCCGTGTGTGCTGGGGAAGCCCCAGGAAACGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCCCCTGTGTGGGCATGTaGGTTTCCTGGGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSPCVGM*VSWGFP
Trigger: GGGGAAGCCCCAGGAAACGCACATGCCCACACAGGG...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTCAAGGGCAACATCCTaGGGCAGCAGCAGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSSRATS*GSSRGS
Trigger: CGACCCCCTGCTGCTGCCGCAGGATGTTGCCCTTGA...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CCA 90 bp ACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCCTGCCTCAGCCCCTaGGCCCAGATCAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHAALMESTAACLSP*AQIRRR
Trigger: TCTCCTCCTGATCTGGGCCCAGGGGCTGAGGCAGGC...AGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp CACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTAGCCTGCCTCAGCCCCTaGGCCCAGATCAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: HTYTHTHTRSTDGEYSCLACLSP*AQIRRR
Trigger: TCTCCTCCTGATCTGGGCCCAGGGGCTGAGGCAGGC...TAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp TCCTGCTCCTCCCAGACTAGCCTCAACATCCCCTTGGTGCTCCCAGGCCACTTCCCAGGGCCTTCTTTGTaGGACTTTCAGCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: SCSSQTSLNIPLVLPGHFPGPSL*DFQLQE
Trigger: TTCTTGGAGCTGAAAGTCCCACAAAGAAGGCCCTGG...GAAGTGGCCTGGGAGCACCAAGGGGATGTTGAGGCTAGTCTGGGAGGAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp AACAGAAATAAGCGGTTCAGTTACCCCAACCCCAGCACAAAGTCGTCAGGGAGTGCCTGTCATCATTCCTaGGGCGAGGGGAGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: NRNKRFSYPNPSTKSSGSACHHS*GEGSLP
Trigger: AGGCAGGCTCCCCTCGCCTCAGGAATGATGACAGGC...ACTCCCTGACGACTTTGTGCTGGGGTTGGGGTAACTGAACCGCTTATTTCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCGGGCCACTCGATCCTTaGAGGATGGGGAGATGTGCC +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSGPLDP*RMGRCA
Trigger: GGCACATCTCCCCATCCTTCAAGGATCGAGTGGCCC...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR TCA 90 bp TTATTCACTCAACTGAACACACACACACATACACACACACACACACACGCAGCATCAGCGACTGGAGGGTaGGGCCCAGGCCGGGACCTG +
Preference number: 4 (lower is better)
Translates to: LFTQLNTHTHTHTHTHAASATGG*GPGRDL
Trigger: CAGGTCCCGGCCTGGGCCTCACCCTCCAGTCGCTGA...TGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCGCATCTGAAGCCTGGTaGCCCACCCCCTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSASEAW*PTPSIP
Trigger: TGGAATGGAGGGGGTGGGGCACCAGGCTTCAGATGC...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481065.5
3UTR CAA 72 bp AACTCCTGCTCCTCCCAGACTAGCCTCAACATCCCCTaGGTGCTCCCAGGCCACTTCATCACAGATAAGCCT +
Preference number: 4 (lower is better)
Translates to: NSCSSQTSLNIP*VLPGHFITDKP
Trigger: AGGCTTATCTGTGATGAAGTGGCCTGGGAGCACCAAGGGGATGTTGAGGCTAGTCTGGGAGGAGCAGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
3UTR CAA 72 bp TGCAGAAAAGGTAGATCAAGGCCCAAATGCTACGACTaGGCTCCCTGTGTGGGCATGTGCGTTTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CRKGRSRPKCYD*APCVGMCVSWG
Trigger: GCCCCAGGAAACGCACATGCCCACACAGGGAGCCAAGTCGTAGCATTTGGGCCTTGATCTACCTTTTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp ACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATCCACAAGCACGGTCCTaGAAACCTGTGGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHAALMESTAAYPQARS*KPVARS
Trigger: GCTGCGGGCCACAGGTTTTCAGGACCGTGCTTGTGG...ATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR GCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCACCAGCGCATGCTTCTaGCCAGAGGGCCTACAGGAA +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSTSACF*PEGLQE
Trigger: TTCCTGTAGGCCCTCTGGGCAGAAGCATGCGCTGGT...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp CACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTAGACCTGGGTCACTTGTaGCGTGGTGGAGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: HTYTHTHTRSTDGEYSCLDLGHL*RGGGEV
Trigger: CACCTCTCCTCCACCACGGCACAAGTGACCCAGGTC...TAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCAGAAGCTGGTCCTGCTaGTCCCAGTTGACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSRSWSC*SQLTWV
Trigger: GACCCAGGTCAACTGGGAGCAGCAGGACCAGCTTCT...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp ACAGAAATAAGCGGTTCAGTTACCCCAACCCCAGCACAAAGTCGTCAGGGAGTGACAGAGCCCAGCAGGTaGAGCTTCTGCCTGGACACA +
Preference number: 4 (lower is better)
Translates to: TEISGSVTPTPAQSRQGVTEPSR*SFCLDT
Trigger: TGTGTCCAGGCAGAAGCTGCACCTGCTGGGCTCTGT...CACTCCCTGACGACTTTGTGCTGGGGTTGGGGTAACTGAACCGCTTATTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp TACGTGGTGGATAGCGCATGTCTCCAGGAATCCAACTATGAAATGGTCTTCTCTTTCACGGTCAGCGACTaGAGGGTGAGGCCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: YVVDSACLQESNYEMVFSFTVSD*RVRPRP
Trigger: CGGCCTGGGCCTCACCCTCCAGTCGCTGACCGTGAA...AGAGAAGACCATTTCATAGTTGGATTCCTGGAGACATGCGCTATCCACCACGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp ACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATGGGGTGAGGGAGCACTaGGGCTCCATTCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHAALMESTAAYGVREH*GSIPPV
Trigger: GACAGGAGGAATGGAGCCCCAGTGCTCCCTCACCCC...ATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp ACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGGCATGTGCGTTTCCTaGGGCTTCCCCAGCACACAC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHAALMESTAGMCVS*GFPSTH
Trigger: GTGTGTGCTGGGGAAGCCCCAGGAAACGCACATGCC...AGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp CACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTACACGGGGAACCTGGCTaGTTCCCACCCACTCAACAC +
Preference number: 4 (lower is better)
Translates to: HTYTHTHTRSTDGEYSCLHGEPG*FPPTQH
Trigger: GTGTTGAGTGGGTGGGAACCAGCCAGGTTCCCCGTG...TAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR TCA 90 bp TACGTGGTGGATAGCGCATGTCTCCAGGAATCCAACTATGAAATGGTCTTCTCTGCCTGTCATCATTCCTaGGGCGAGGGGAGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: YVVDSACLQESNYEMVFSACHHS*GEGSLP
Trigger: AGGCAGGCTCCCCTCGCCTCAGGAATGATGACAGGC...AGAGAAGACCATTTCATAGTTGGATTCCTGGAGACATGCGCTATCCACCACGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCCCCTGTGTGGGCATGTaGGTTTCCTGGGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: HTHTHAALMESTAAYIFIPCVGM*VSWGFP
Trigger: GGGGAAGCCCCAGGAAACGCACATGCCCACACAGGG...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCCAAATGGCCAGAAGCTaGTCCTGCTGCTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSQMARS*SCCSQL
Trigger: CAACTGGGAGCAGCAGGACCAGCTTCTGGCCATTTG...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp ACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATGCCCAGGCCGGGACCTaGGGCCACTCGATCCTTGAA +
Preference number: 4 (lower is better)
Translates to: THTHTRSTDGEYSCLYIHAQAGT*GHSILE
Trigger: TTCAAGGATCGAGTGGCCCCAGGTCCCGGCCTGGGC...ATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp ACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATTTCACGGTCAGCGACTaGAGGGTGAGGCCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: THTHTRSTDGEYSCLYIHFTVSD*RVRPRP
Trigger: CGGCCTGGGCCTCACCCTCCAGTCGCTGACCGTGAA...ATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp ACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATCGGGGCTGGGAGTGGTaGTACCTTCCACAAGATCGG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHAALMESTAAYRGWEW*YLPQDR
Trigger: CCGATCTTGTGGAAGGTACCACCACTCCCAGCCCCG...ATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CCA 90 bp ACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCCGGGGAGCCAGGAGTaGCAGGGCCAAGAGCAGCTA +
Preference number: 4 (lower is better)
Translates to: THTHTRSTDGEYSCLYIHPGSQE*QGQEQL
Trigger: TAGCTGCTCTTGGCCCTGCCACTCCTGGCTCCCCGG...ATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR TCA 90 bp ACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATGCCTGTCATCATTCCTaGGGCGAGGGGAGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: THTHTRSTDGEYSCLYIHACHHS*GEGSLP
Trigger: AGGCAGGCTCCCCTCGCCTCAGGAATGATGACAGGC...ATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR TCA 90 bp TCCTGCTCCTCCCAGACTAGCCTCAACATCCCCTTGGTGCTCCCAGGCCACTTCCTGCCTTTGAATGAGTaGAAGTTACTGAAAATGACG +
Preference number: 4 (lower is better)
Translates to: SCSSQTSLNIPLVLPGHFLPLNE*KLLKMT
Trigger: CGTCATTTTCAGTAACTTTCACTCATTCAAAGGCAG...GAAGTGGCCTGGGAGCACCAAGGGGATGTTGAGGCTAGTCTGGGAGGAGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp GCCCATGAAAGAAAATCAGTCACCAGTAAATCCAACCTCCCCGCTCATTCCTCTACCAGCGCATGCTTCTaGCCAGAGGGCCTACAGGAA +
Preference number: 4 (lower is better)
Translates to: AHERKSVTSKSNLPAHSSTSACF*PEGLQE
Trigger: TTCCTGTAGGCCCTCTGGGCAGAAGCATGCGCTGGT...AGAGGAATGAGCGGGGAGGTTGGATTTACTGGTGACTGATTTTCTTTCATGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCGACCTGGGTCACTTGTaGCGTGGTGGAGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: HTHTHAALMESTAAYIFIDLGHL*RGGGEV
Trigger: CACCTCTCCTCCACCACGGCACAAGTGACCCAGGTC...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCGCCAGAAGCTGGTCCTaGTGCTCCCAGTTGACCTGG +
Preference number: 4 (lower is better)
Translates to: HTHTHAALMESTAAYIFIARSWS*CSQLTW
Trigger: CCAGGTCAACTGGGAGCAGCAGGACCAGCTTCTGGC...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp ACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTTGGAACCTGGCACCGTaGTCAGCCACTGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHAALMESTAWNLAP*SATELS
Trigger: AGAAAGCTCAGTGGCTGAGCACGGTGCCAGGTTCCA...AGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp AACAGAAATAAGCGGTTCAGTTACCCCAACCCCAGCACAAAGTCGTCAGGGAGTTGGAACCTGGCACCGTaGTCAGCCACTGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: NRNKRFSYPNPSTKSSGSWNLAP*SATELS
Trigger: AGAAAGCTCAGTGGCTGAGCACGGTGCCAGGTTCCA...ACTCCCTGACGACTTTGTGCTGGGGTTGGGGTAACTGAACCGCTTATTTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp AACAGAAATAAGCGGTTCAGTTACCCCAACCCCAGCACAAAGTCGTCAGGGAGTGACCACCACGATGACTaGTGTGCAGATGACCACCAG +
Preference number: 4 (lower is better)
Translates to: NRNKRFSYPNPSTKSSGSDHHDD*CADDHQ
Trigger: CTGGTGGTCATCTGCACAGCAGTCATCGTGGTGGTC...ACTCCCTGACGACTTTGTGCTGGGGTTGGGGTAACTGAACCGCTTATTTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTCAACATCCCCTTGGTaGTCCCAGGCCACTTCATCA +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSSTSPW*SQATSS
Trigger: TGATGAAGTGGCCTGGGAGCACCAAGGGGATGTTGA...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp ACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATTGCTCCCAGTTGACCTaGGTCACTTGTGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHAALMESTAAYCSQLT*VTCAVV
Trigger: CACCACGGCACAAGTGACCCAGGTCAACTGGGAGCA...ATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp TTATTCACTCAACTGAACACACACACACATACACACACACACACACACGCAGCAGGGGTGAGGGAGCACTaGGGCTCCATTCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: LFTQLNTHTHTHTHTHAAGVREH*GSIPPV
Trigger: GACAGGAGGAATGGAGCCCCAGTGCTCCCTCACCCC...TGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCGTTGATGGCCACATGTaGAAAGTGGCTACGTGGTGG +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSVDGHM*KVATWW
Trigger: CCACCACGTAGCCACTTTCCACATGTGGCCATCAAC...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATAACTCCACGGGGAACCTaGCTGGTTCCCACCCACTCA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYITPRGT*LVPTHS
Trigger: TGAGTGGGTGGGAACCAGCCAGGTTCCCCGTGGAGT...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR TCA 90 bp CACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTAACACACACGCAGCACTaGTGGAGAGTACAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: HTYTHTHTRSTDGEYSCLTHTQH*WRVQLL
Trigger: AAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGT...TAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR TCA 90 bp AACAGAAATAAGCGGTTCAGTTACCCCAACCCCAGCACAAAGTCGTCAGGGAGTAAATCTGAAGTTTGCTaGCTCCCTTGGTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: NRNKRFSYPNPSTKSSGSKSEVC*LPWCQG
Trigger: GCCCTGGCACCAAGGGAGTCAGCAAACTTCAGATTT...ACTCCCTGACGACTTTGTGCTGGGGTTGGGGTAACTGAACCGCTTATTTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTCTAGAGGGGGATaGTTAACAGACTGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSCSRGG*LTDWVQ
Trigger: TTGGACCCAGTCTGTTAATCATCCCCCTCTAGAGCA...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR TCA 90 bp CACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTAAAGCTTGTTCCTTGGTaGACTCAGTCAGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: HTYTHTHTRSTDGEYSCLKLVPW*TQSGEG
Trigger: CCCCTCTCCTGACTGAGTTCACCAAGGAACAAGCTT...TAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR GCA 90 bp TACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTGGAGACACCAGCGCATaGTTCTGCCCAGAGGGCCTA +
Preference number: 4 (lower is better)
Translates to: YTHTHTRSTDGEYSCLYIGDTSA*FCPEGL
Trigger: TAGGCCCTCTGGGCAGAAGCATGCGCTGGTGTCTCC...AATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATAAGAAGCTGGTCCTGCTaGTCCCAGTTGACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYIRSWSC*SQLTWV
Trigger: GACCCAGGTCAACTGGGAGCAGCAGGACCAGCTTCT...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp TACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTGCCAGAAGCTGGTCCTaGTGCTCCCAGTTGACCTGG +
Preference number: 4 (lower is better)
Translates to: YTHTHTRSTDGEYSCLYIARSWS*CSQLTW
Trigger: CCAGGTCAACTGGGAGCAGCAGGACCAGCTTCTGGC...AATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp ACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTCCTAGACAAAACTCCTaGTCCTCCCAGACTAGCCTC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHAALMESTAPRQNS*SSQTSL
Trigger: GAGGCTAGTCTGGGAGGAGCAGGAGTTTTGTCTAGG...AGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCAAGTGTTCAGCACAGTaGCTGGAAGATGGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSKCSAQ*LEDGRS
Trigger: ACTCCTGCCATCTTCCAGGCACTGTGCTGAACACTT...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR GCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCCAGTTGCCTTGGGGATaGTCCATGTTGTACATCCTG +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSQLPWG*SMLYIL
Trigger: CAGGATGTACAACATGGAGCATCCCCAAGGCAACTG...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CCA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCGCCCAGGCCGGGACCTaGGGCCACTCGATCCTTGAA +
Preference number: 4 (lower is better)
Translates to: THAALMESTAAYIFIYNSAQAGT*GHSILE
Trigger: TTCAAGGATCGAGTGGCCCCAGGTCCCGGCCTGGGC...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp ACTCACCCTAGGCCTGCCATAATGCAAAATGGAATAGAACGAAAAGGCCAAGGACCAGCGTCGCGGCCATaGCTCCAAGCAATGGAATCT +
Preference number: 4 (lower is better)
Translates to: THPRPAIMQNGIERKGQGPASRP*LQAMES
Trigger: AGATTCCATTGCTTGGAGCCATGGCCGCGACGCTGG...TCCTTGGCCTTTTCGTTCTATTCCATTTTGCATTATGGCAGGCCTAGGGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp TACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTGGCATGTGCGTTTCCTaGGGCTTCCCCAGCACACAC +
Preference number: 4 (lower is better)
Translates to: YTHTHTRSTDGEYSCLYIGMCVS*GFPSTH
Trigger: GTGTGTGCTGGGGAAGCCCCAGGAAACGCACATGCC...AATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp ACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTCCAAATGCTACGACTTaGCTCCCTGTGTGGGCATGT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHAALMESTAPNATT*LPVWAC
Trigger: ACATGCCCACACAGGGAGCCAAGTCGTAGCATTTGG...AGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp TCCTGCTCCTCCCAGACTAGCCTCAACATCCCCTTGGTGCTCCCAGGCCACTTCAATCCAACTATGAAATaGTCTTCTCTGGTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: SCSSQTSLNIPLVLPGHFNPTMK*SSLVLR
Trigger: TCTGAGAACCAGAGAAGACCATTTCATAGTTGGATT...GAAGTGGCCTGGGAGCACCAAGGGGATGTTGAGGCTAGTCTGGGAGGAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCCTTCCACAAGATCGGTaGCTTGTACACGGGAAACAC +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSLPQDR*LVHGKH
Trigger: GTGTTTCCCGTGTACAAGCCACCGATCTTGTGGAAG...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp TACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTTCAGCCAAGCGGGGCTaGGAGTGGTGGTACCTTCCA +
Preference number: 4 (lower is better)
Translates to: YTHTHTRSTDGEYSCLYISAKRG*EWWYLP
Trigger: TGGAAGGTACCACCACTCCCAGCCCCGCTTGGCTGA...AATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CCA 90 bp TACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTGGTCCTGAAAACCTGTaGCCCGCAGCCCTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: YTHTHTRSTDGEYSCLYIGPENL*PAALSQ
Trigger: TTGGCTGAGGGCTGCGGGCCACAGGTTTTCAGGACC...AATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCACCCTGAGGCTGCCTTaGAGGAAAGCAAATGACAGA +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSTLRLP*RKANDR
Trigger: TCTGTCATTTGCTTTCCTCCAAGGCAGCCTCAGGGT...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CCA 90 bp CACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTACTGATGAGGAACTGTTaGCTGAGCTCCTCTGGCATC +
Preference number: 4 (lower is better)
Translates to: HTYTHTHTRSTDGEYSCLLMRNC*LSSSGI
Trigger: GATGCCAGAGGAGCTCAGCCAACAGTTCCTCATCAG...TAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR TCA 90 bp ACAGAAATAAGCGGTTCAGTTACCCCAACCCCAGCACAAAGTCGTCAGGGAGTGTGTAACTCAGGACATTaGAGTAGTCATGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: TEISGSVTPTPAQSRQGVCNSGH*SSHAAR
Trigger: CCGAGCTGCATGACTACTTCAATGTCCTGAGTTACA...CACTCCCTGACGACTTTGTGCTGGGGTTGGGGTAACTGAACCGCTTATTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp TACGTGGTGGATAGCGCATGTCTCCAGGAATCCAACTATGAAATGGTCTTCTCTCCCCGCTCATTCCTCTaGGAGAGATGGTGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: YVVDSACLQESNYEMVFSPRSFL*ERWWKD
Trigger: ATCCTTCCACCATCTCTCTCAGAGGAATGAGCGGGG...AGAGAAGACCATTTCATAGTTGGATTCCTGGAGACATGCGCTATCCACCACGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp ACAGAAATAAGCGGTTCAGTTACCCCAACCCCAGCACAAAGTCGTCAGGGAGTGCCCATCTTAAGTGGTTaGTGGCCACATGTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: TEISGSVTPTPAQSRQGVPILSG*WPHVES
Trigger: ACTTTCCACATGTGGCCATCAACCACTTAAGATGGG...CACTCCCTGACGACTTTGTGCTGGGGTTGGGGTAACTGAACCGCTTATTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp ATGACATTTATTCACTCAACTGAACACACACACACATACACACACACACACACACGGGCCAGCCGCACTTaGGTCCACAGCCTCCAACCA +
Preference number: 4 (lower is better)
Translates to: MTFIHSTEHTHTYTHTHTRASRT*VHSLQP
Trigger: TGGTTGGAGGCTGTGGACTCAAGTGCGGCTGGCCCG...TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAATGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR TCA 90 bp ACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATTTGCCAGCTAGACCCTaGGGCTGCCTTGGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: THTHTRSTDGEYSCLYIHLPARP*GCLGGK
Trigger: CTTTCCTCCAAGGCAGCCTCAGGGTCTAGCTGGCAA...ATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR TCA 90 bp ACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTACTTTCTCAACCTCCTaGAGGCTCAGTTTCCCCATG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHAALMESTATFSTS*RLSFPM
Trigger: CATGGGGAAACTGAGCCTTCAGGAGGTTGAGAAAGT...AGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR GCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCAGAGCCACCTTTCTCTaGAGAAATGTTCCCCGTTGT +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSRATFL*RNVPRC
Trigger: ACAACGGGGAACATTTCTGCAGAGAAAGGTGGCTCT...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp CTTGCTTCACATTCTCTTTCAGTTCCTTGGCCCATGAAAGAAAATCAGTCACCAGACCTGGGTCACTTGTaGCGTGGTGGAGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LASHSLSVPWPMKENQSPDLGHL*RGGGEV
Trigger: CACCTCTCCTCCACCACGGCACAAGTGACCCAGGTC...TGGTGACTGATTTTCTTTCATGGGCCAAGGAACTGAAAGAGAATGTGAAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp TACGTGGTGGATAGCGCATGTCTCCAGGAATCCAACTATGAAATGGTCTTCTCTGACCACCACGATGACTaGTGTGCAGATGACCACCAG +
Preference number: 4 (lower is better)
Translates to: YVVDSACLQESNYEMVFSDHHDD*CADDHQ
Trigger: CTGGTGGTCATCTGCACAGCAGTCATCGTGGTGGTC...AGAGAAGACCATTTCATAGTTGGATTCCTGGAGACATGCGCTATCCACCACGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp ACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTCCTCCATTCCAGCCATaGACCTCTAGCATTTCACAC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHAALMESTAPPFQP*TSSISH
Trigger: GTGTGAAATGCTAGAGGTGCATGGCTGGAATGGAGG...AGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CCA 90 bp ATGACATTTATTCACTCAACTGAACACACACACACATACACACACACACACACAGCCTGCCTCAGCCCCTaGGCCCAGATCAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: MTFIHSTEHTHTYTHTHTACLSP*AQIRRR
Trigger: TCTCCTCCTGATCTGGGCCCAGGGGCTGAGGCAGGC...TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAATGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp ACTCACCCTAGGCCTGCCATAATGCAAAATGGAATAGAACGAAAAGGCCAAGGAGGGTCACTTGTGCCGTaGTGGAGGAGAGGTGACATT +
Preference number: 4 (lower is better)
Translates to: THPRPAIMQNGIERKGQGGSLVP*WRRGDI
Trigger: AATGTCACCTCTCCTCCACCACGGCACAAGTGACCC...TCCTTGGCCTTTTCGTTCTATTCCATTTTGCATTATGGCAGGCCTAGGGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCAGTCAGCATTACAAATaGCCAGAAGCTGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSSQHYK*PEAGPA
Trigger: AGCAGGACCAGCTTCTGGCCATTTGTAATGCTGACT...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp ACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATTCGATCCTTGAAGGATaGGGAGATGTGCCACCCCAA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHAALMESTAAYSILEG*GDVPPQ
Trigger: TTGGGGTGGCACATCTCCCCATCCTTCAAGGATCGA...ATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp GCCCATGAAAGAAAATCAGTCACCAGTAAATCCAACCTCCCCGCTCATTCCTCTTCGATCCTTGAAGGATaGGGAGATGTGCCACCCCAA +
Preference number: 4 (lower is better)
Translates to: AHERKSVTSKSNLPAHSSSILEG*GDVPPQ
Trigger: TTGGGGTGGCACATCTCCCCATCCTTCAAGGATCGA...AGAGGAATGAGCGGGGAGGTTGGATTTACTGGTGACTGATTTTCTTTCATGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp ACTCACCCTAGGCCTGCCATAATGCAAAATGGAATAGAACGAAAAGGCCAAGGAATGGAATCTGGAACCTaGCACCGTGCTCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: THPRPAIMQNGIERKGQGMESGT*HRAQPL
Trigger: CAGTGGCTGAGCACGGTGCCAGGTTCCAGATTCCAT...TCCTTGGCCTTTTCGTTCTATTCCATTTTGCATTATGGCAGGCCTAGGGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp TACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCCAGCGTCGCGGCCATaGCTCCAAGCAATGGAATCT +
Preference number: 4 (lower is better)
Translates to: YTHTHTRSTDGEYSCLYIPASRP*LQAMES
Trigger: AGATTCCATTGCTTGGAGCCATGGCCGCGACGCTGG...AATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp ACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCCAGCGTCGCGGCCATaGCTCCAAGCAATGGAATCT +
Preference number: 4 (lower is better)
Translates to: THTHTRSTDGEYSCLYIHPASRP*LQAMES
Trigger: AGATTCCATTGCTTGGAGCCATGGCCGCGACGCTGG...ATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp GTTCATCTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCAGGGGTGAGGGAGCACTaGGGCTCCATTCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: VHLIFLPKDLELWTDFSSGVREH*GSIPPV
Trigger: GACAGGAGGAATGGAGCCCCAGTGCTCCCTCACCCC...TGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAGATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp TACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTACTTGGCTCCCTGTGTaGGCATGTGCGTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: YTHTHTRSTDGEYSCLYITWLPV*ACAFPG
Trigger: CCCAGGAAACGCACATGCCCACACAGGGAGCCAAGT...AATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATAGGTAGGGGAGCTCCATaGCTGTCACAGCTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYIGRGAP*LSQLSD
Trigger: ATCAGACAGCTGTGACAGCCATGGAGCTCCCCTACC...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp GCCCATGAAAGAAAATCAGTCACCAGTAAATCCAACCTCCCCGCTCATTCCTCTCCAAAGTCTTCCCTCTaGCTCAGAAGTGGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: AHERKSVTSKSNLPAHSSPKSSL*LRSGRG
Trigger: TCCCCTACCACTTCTGAGCCAGAGGGAAGACTTTGG...AGAGGAATGAGCGGGGAGGTTGGATTTACTGGTGACTGATTTTCTTTCATGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486257.5
CDS-3UTR CCA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCAAGCGGGGCTGGGAGTaGTGGTACCTTCCACAAGAT +
Preference number: 4 (lower is better)
Translates to: HTHTHAALMESTAAYIFIKRGWE*WYLPQD
Trigger: ATCTTGTGGAAGGTACCACCACTCCCAGCCCCGCTT...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CCA 90 bp TACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTGAAGCATCTGAAGCCTaGTGCCCCACCCCCTCCATT +
Preference number: 4 (lower is better)
Translates to: YTHTHTRSTDGEYSCLYIEASEA*CPTPSI
Trigger: AATGGAGGGGGTGGGGCACCAGGCTTCAGATGCTTC...AATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR TCA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTTCCTCCTGTCCAGCTaGTTTTCTCCTGAGGTCACC +
Preference number: 4 (lower is better)
Translates to: HTHTHAALMESTAAYIFIFLLSS*FSPEVT
Trigger: GGTGACCTCAGGAGAAAATCAGCTGGACAGGAGGAA...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR TCA 90 bp ACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTTGTAACTCAGGACATTaGAGTAGTCATGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHAALMESTACNSGH*SSHAAR
Trigger: CCGAGCTGCATGACTACTTCAATGTCCTGAGTTACA...AGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR TCA 90 bp ACTCACCCTAGGCCTGCCATAATGCAAAATGGAATAGAACGAAAAGGCCAAGGAACACACACGCAGCACTaGTGGAGAGTACAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: THPRPAIMQNGIERKGQGTHTQH*WRVQLL
Trigger: AAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGT...TCCTTGGCCTTTTCGTTCTATTCCATTTTGCATTATGGCAGGCCTAGGGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATAACTGTCGTCTCTTCCTaGAGGCCTGTGTATGTCTCC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYITVVSS*RPVYVS
Trigger: GGAGACATACACAGGCCTTCAGGAAGAGACGACAGT...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp TACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATAGCAGGGATCTGTaGGGTCCATCAGGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: YTHTHTRSTDGEYSCLYIHSRDL*GPSGAD
Trigger: GTCAGCACCTGATGGACCTCACAGATCCCTGCTATG...AATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR TCA 90 bp CACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATTCTCTAGTGTTTGGTaGAGTGTTCAGCACAGTGCC +
Preference number: 4 (lower is better)
Translates to: HTYTHTHTRSTDGEYSCLFSSVW*SVQHSA
Trigger: GGCACTGTGCTGAACACTTCACCAAACACTAGAGAA...TAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR GCA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCGCCAGAAGCTGGTCCTaGTGCTCCCAGTTGACCTGG +
Preference number: 4 (lower is better)
Translates to: THAALMESTAAYIFIYNSARSWS*CSQLTW
Trigger: CCAGGTCAACTGGGAGCAGCAGGACCAGCTTCTGGC...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp ACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATAAGGATGGGGAGATGTaGCACCCCAAGTCAGCATTA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHAALMESTAAYKDGEM*HPKSAL
Trigger: TAATGCTGACTTGGGGTGGCACATCTCCCCATCCTT...ATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp ACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATTGGAACCTGGCACCGTaGTCAGCCACTGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: THTHTRSTDGEYSCLYIHWNLAP*SATELS
Trigger: AGAAAGCTCAGTGGCTGAGCACGGTGCCAGGTTCCA...ATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATAAGGAAAGTGACCACTTaGCAGCTAGACCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYIRKVTT*QLDPEA
Trigger: AGCCTCAGGGTCTAGCTGGCAAGTGGTCACTTTCCT...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CCA 90 bp ACTCACCCTAGGCCTGCCATAATGCAAAATGGAATAGAACGAAAAGGCCAAGGACCAAATGCTACGACTTaGCTCCCTGTGTGGGCATGT +
Preference number: 4 (lower is better)
Translates to: THPRPAIMQNGIERKGQGPNATT*LPVWAC
Trigger: ACATGCCCACACAGGGAGCCAAGTCGTAGCATTTGG...TCCTTGGCCTTTTCGTTCTATTCCATTTTGCATTATGGCAGGCCTAGGGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATACCAAAGTCTTCCCTCTaGCTCAGAAGTGGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYIPKSSL*LRSGRG
Trigger: TCCCCTACCACTTCTGAGCCAGAGGGAAGACTTTGG...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp CACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATCAACACAGTTGCCTTaGGGATGCTCCATGTTGTAC +
Preference number: 4 (lower is better)
Translates to: HTYTHTHTRSTDGEYSCLSTQLP*GCSMLY
Trigger: GTACAACATGGAGCATCCCCAAGGCAACTGTGTTGA...TAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CCA 90 bp ACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTTACAGGAAGCAGATGTaGCCTCTTCTGCCACTGAAA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHAALMESTAYRKQM*PLLPLK
Trigger: TTTCAGTGGCAGAAGAGGCCACATCTGCTTCCTGTA...AGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp AACAGAAATAAGCGGTTCAGTTACCCCAACCCCAGCACAAAGTCGTCAGGGAGTTACAGGAAGCAGATGTaGCCTCTTCTGCCACTGAAA +
Preference number: 4 (lower is better)
Translates to: NRNKRFSYPNPSTKSSGSYRKQM*PLLPLK
Trigger: TTTCAGTGGCAGAAGAGGCCACATCTGCTTCCTGTA...ACTCCCTGACGACTTTGTGCTGGGGTTGGGGTAACTGAACCGCTTATTTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486257.5
CDS-3UTR TCA 90 bp ATGACATTTATTCACTCAACTGAACACACACACACATACACACACACACACACAGGGCCACTCGATCCTTaGAGGATGGGGAGATGTGCC +
Preference number: 4 (lower is better)
Translates to: MTFIHSTEHTHTYTHTHTGPLDP*RMGRCA
Trigger: GGCACATCTCCCCATCCTTCAAGGATCGAGTGGCCC...TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAATGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR TCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCAAAGTCGTCAGGGAGTaGATAAAAGGGTTCGAAGAA +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSKVVRE*IKGFEE
Trigger: TTCTTCGAACCCTTTTATTCACTCCCTGACGACTTT...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp CTTGCTTCACATTCTCTTTCAGTTCCTTGGCCCATGAAAGAAAATCAGTCACCACCCCGCTCATTCCTCTaGGAGAGATGGTGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: LASHSLSVPWPMKENQSPPRSFL*ERWWKD
Trigger: ATCCTTCCACCATCTCTCTCAGAGGAATGAGCGGGG...TGGTGACTGATTTTCTTTCATGGGCCAAGGAACTGAAAGAGAATGTGAAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp TACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTAAATGCAAAGAAGGGTaGGCCCCTGGGAGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: YTHTHTRSTDGEYSCLYIKCKEG*APGSLK
Trigger: TTTGAGGCTCCCAGGGGCTCACCCTTCTTTGCATTT...AATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR TCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATAACAAACTGCATAGGGTaGGCCACAAGAAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYITNCIG*ATRKAM
Trigger: CATGGCCTTTCTTGTGGCTCACCCTATGCAGTTTGT...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR GCA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCACCAGCGCATGCTTCTaGCCAGAGGGCCTACAGGAA +
Preference number: 4 (lower is better)
Translates to: THAALMESTAAYIFIYNSTSACF*PEGLQE
Trigger: TTCCTGTAGGCCCTCTGGGCAGAAGCATGCGCTGGT...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp ACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTCCGTTGTTTCTATTGTaGCTGTCATCATTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHAALMESTAPLFLL*LSSFLR
Trigger: CCTCAGGAATGATGACAGGCACAATAGAAACAACGG...AGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCAGAAGCTGGTCCTGCTaGTCCCAGTTGACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: THAALMESTAAYIFIYNSRSWSC*SQLTWV
Trigger: GACCCAGGTCAACTGGGAGCAGCAGGACCAGCTTCT...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp ACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGGTAGGTGTGATAGATaGAGAAGTACTCCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHAALMESTAGRCDR*RSTPLY
Trigger: ATACAGGGGAGTACTTCTGCATCTATCACACCTACC...AGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp ACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATTCAACATCCCCTTGGTaGTCCCAGGCCACTTCATCA +
Preference number: 4 (lower is better)
Translates to: THTHTRSTDGEYSCLYIHSTSPW*SQATSS
Trigger: TGATGAAGTGGCCTGGGAGCACCAAGGGGATGTTGA...ATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp TACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCCTAGACAAAACTCCTaGTCCTCCCAGACTAGCCTC +
Preference number: 4 (lower is better)
Translates to: YTHTHTRSTDGEYSCLYIPRQNS*SSQTSL
Trigger: GAGGCTAGTCTGGGAGGAGCAGGAGTTTTGTCTAGG...AATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCCGCAAGACACAACCTTaGTTCACATTCTCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSRKTQP*FTFSFS
Trigger: ACTGAAAGAGAATGTGAAGCAAGGTTGTGTCTTGCG...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp ACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTAGGATAGCATGTTTCTaGAGGAAAGTGACCACTTGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHAALMESTARIACF*RKVTTC
Trigger: GCAAGTGGTCACTTTCCTGCAGAAACATGCTATCCT...AGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR GCA 90 bp ACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTCTGAAAATCTGCATCTaGACCCAGAAGCATCTGAAG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHAALMESTALKICI*TQKHLK
Trigger: CTTCAGATGCTTCTGGGTGCAGATGCAGATTTTCAG...AGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR GCA 90 bp TACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTAGATCCACATTCACCTaGCTCGCAGGCTCTCAACAC +
Preference number: 4 (lower is better)
Translates to: YTHTHTRSTDGEYSCLYIRSTFT*LAGSQH
Trigger: GTGTTGAGAGCCTGCGAGGCAGGTGAATGTGGATCT...AATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CCA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTCACTTGTGCCGTGGTaGAGGAGAGGTGACATTGTA +
Preference number: 4 (lower is better)
Translates to: HTHTHAALMESTAAYIFISLVPW*RRGDIV
Trigger: TACAATGTCACCTCTCCTCCACCACGGCACAAGTGA...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATCACTTGTGCCGTGGTaGAGGAGAGGTGACATTGTA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYISLVPW*RRGDIV
Trigger: TACAATGTCACCTCTCCTCCACCACGGCACAAGTGA...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp CTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCATTCTTCTGCTCCCAGTTGACCTaGGTCACTTGTGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: LIFLPKDLELWTDFSSFFCSQLT*VTCAVV
Trigger: CACCACGGCACAAGTGACCCAGGTCAACTGGGAGCA...GAAGAATGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp ACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTTCACCTTCCACAGAATaGATTCTGAGGGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHAALMESTASPSTE*ILRAFF
Trigger: GAAGAAAGCCCTCAGAATCCATTCTGTGGAAGGTGA...AGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp AACAGAAATAAGCGGTTCAGTTACCCCAACCCCAGCACAAAGTCGTCAGGGAGTTCACCTTCCACAGAATaGATTCTGAGGGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: NRNKRFSYPNPSTKSSGSSPSTE*ILRAFF
Trigger: GAAGAAAGCCCTCAGAATCCATTCTGTGGAAGGTGA...ACTCCCTGACGACTTTGTGCTGGGGTTGGGGTAACTGAACCGCTTATTTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCCTTCCACAAGATCGGTaGCTTGTACACGGGAAACAC +
Preference number: 4 (lower is better)
Translates to: HTHTHAALMESTAAYIFILPQDR*LVHGKH
Trigger: GTGTTTCCCGTGTACAAGCCACCGATCTTGTGGAAG...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCCAAGAAGTGTTTACTTaGGGGATGATACATGGATGG +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSQEVFT*GMIHGW
Trigger: CCATCCATGTATCATCCCCCAAGTAAACACTTCTTG...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CCA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTTGGCTGAGCTCCTCTaGCATCCTCCTGATGAAGAA +
Preference number: 4 (lower is better)
Translates to: HTHTHAALMESTAAYIFILAELL*HPPDEE
Trigger: TTCTTCATCAGGAGGATGCCAGAGGAGCTCAGCCAA...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR TCA 90 bp ACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATAAATGCTGGCCATTATaGGGAATGTGTCTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHAALMESTAAYKCWPL*GMCLSE
Trigger: CTCTGAGAGACACATTCCTCATAATGGCCAGCATTT...ATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp ACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATCAGCAAAAGGAAACTTaGAATGCCTGCCCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHAALMESTAAYQQKET*NACPEN
Trigger: ATTCTCTGGGCAGGCATTTCAAGTTTCCTTTTGCTG...ATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp ACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATCCAGGAATCCAACTATaGAATGGTCTTCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHAALMESTAAYPGIQL*NGLLWF
Trigger: GAACCAGAGAAGACCATTTCATAGTTGGATTCCTGG...ATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCTGTCACGTTTGCCCGTaGAAGGGGAAGAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: THAALMESTAAYIFIYNSCHVCP*KGKKCW
Trigger: CCAGCACTTCTTCCCCTTTCACGGGCAAACGTGACA...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR TCA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCCTTTCCTGTGCACAATaGCCTCATGAGAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: HTHTHAALMESTAAYIFILSCAQ*PHESWK
Trigger: TTTCCAGCTCTCATGAGGTCATTGTGCACAGGAAAG...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR TCA 90 bp ACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATTGTTTACTTGGGGGATaGTACATGGATGGGACAAAG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHAALMESTAAYCLLGG*YMDGTK
Trigger: CTTTGTCCCATCCATGTATCATCCCCCAAGTAAACA...ATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR GCA 90 bp TACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTAAGGATGGGGAGATGTaGCACCCCAAGTCAGCATTA +
Preference number: 4 (lower is better)
Translates to: YTHTHTRSTDGEYSCLYIKDGEM*HPKSAL
Trigger: TAATGCTGACTTGGGGTGGCACATCTCCCCATCCTT...AATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp ACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATAAGGATGGGGAGATGTaGCACCCCAAGTCAGCATTA +
Preference number: 4 (lower is better)
Translates to: THTHTRSTDGEYSCLYIHKDGEM*HPKSAL
Trigger: TAATGCTGACTTGGGGTGGCACATCTCCCCATCCTT...ATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp ACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATGGTAGGTGTGATAGATaGAGAAGTACTCCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHAALMESTAAYGRCDR*RSTPLY
Trigger: ATACAGGGGAGTACTTCTGCATCTATCACACCTACC...ATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp ATGACATTTATTCACTCAACTGAACACACACACACATACACACACACACACACAACAGAGCCCAGCAGGTaGAGCTTCTGCCTGGACACA +
Preference number: 4 (lower is better)
Translates to: MTFIHSTEHTHTYTHTHTTEPSR*SFCLDT
Trigger: TGTGTCCAGGCAGAAGCTGCACCTGCTGGGCTCTGT...TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAATGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCGTGTCTTTGGGCTTCTaGTTCTCCAAAGTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: HTHTHAALMESTAAYIFIVSLGF*FSKVFP
Trigger: AGGGAAGACTTTGGAGAAGCAGAAGCCCAAAGACAC...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATACACTGTGCTTTATTCTaGCCTGACTTTTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYIHCALF*PDFWGC
Trigger: ACAGCCCCAAAAGTCAGGGCAGAATAAAGCACAGTG...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CCA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCGGGTCACTTGTGCCGTaGTGGAGGAGAGGTGACATT +
Preference number: 4 (lower is better)
Translates to: THAALMESTAAYIFIYNSGSLVP*WRRGDI
Trigger: AATGTCACCTCTCCTCCACCACGGCACAAGTGACCC...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCCAAATGGCCAGAAGCTaGTCCTGCTGCTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: THAALMESTAAYIFIYNSQMARS*SCCSQL
Trigger: CAACTGGGAGCAGCAGGACCAGCTTCTGGCCATTTG...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATAAGTCAGCATTACAAATaGCCAGAAGCTGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYISQHYK*PEAGPA
Trigger: AGCAGGACCAGCTTCTGGCCATTTGTAATGCTGACT...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCAGTCAGCATTACAAATaGCCAGAAGCTGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: HTHTHAALMESTAAYIFISQHYK*PEAGPA
Trigger: AGCAGGACCAGCTTCTGGCCATTTGTAATGCTGACT...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCATGGAATCTGGAACCTaGCACCGTGCTCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: THAALMESTAAYIFIYNSMESGT*HRAQPL
Trigger: CAGTGGCTGAGCACGGTGCCAGGTTCCAGATTCCAT...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATCCAGAAGATGCCTCTaGTTGCTAACCAGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYISRRCL*LLTSLC
Trigger: ACAGAGACTGGTTAGCAACCAGAGGCATCTTCTGGA...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp TCATCTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCATTACTTGGCTCCCTGTGTaGGCATGTGCGTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SSNLSSKGLGALDRFQFITWLPV*ACAFPG
Trigger: CCCAGGAAACGCACATGCCCACACAGGGAGCCAAGT...AATGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCGGTAGGGGAGCTCCATaGCTGTCACAGCTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: THAALMESTAAYIFIYNSGRGAP*LSQLSD
Trigger: ATCAGACAGCTGTGACAGCCATGGAGCTCCCCTACC...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCGAGCACAGAAAGTGGTaGACACTAGGATTTGGGCTA +
Preference number: 4 (lower is better)
Translates to: HTHTHAALMESTAAYIFIEHRKW*TLGFGL
Trigger: TAGCCCAAATCCTAGTGTCCACCACTTTCTGTGCTC...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CCA 90 bp ACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATAGAAGGGTGAGCCCCTaGGAGCCTCAAATAGTTTAC +
Preference number: 4 (lower is better)
Translates to: THTHTRSTDGEYSCLYIHRRVSP*EPQIVY
Trigger: GTAAACTATTTGAGGCTCCCAGGGGCTCACCCTTCT...ATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CCA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTTGGGGGATGATACATaGATGGGACAAAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: HTHTHAALMESTAAYIFILGDDT*MGQRSW
Trigger: CCAAGACCTTTGTCCCATCCATGTATCATCCCCCAA...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR TCA 90 bp TTATTCACTCAACTGAACACACACACACATACACACACACACACACACGCAGCATGTAACTCAGGACATTaGAGTAGTCATGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: LFTQLNTHTHTHTHTHAACNSGH*SSHAAR
Trigger: CCGAGCTGCATGACTACTTCAATGTCCTGAGTTACA...TGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR TCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATAAAATGCTGGCCATTATaGGGAATGTGTCTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYIKCWPL*GMCLSE
Trigger: CTCTGAGAGACACATTCCTCATAATGGCCAGCATTT...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCCCAGGAATCCAACTATaGAATGGTCTTCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: HTHTHAALMESTAAYIFIPGIQL*NGLLWF
Trigger: GAACCAGAGAAGACCATTTCATAGTTGGATTCCTGG...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATAGGTGAGTACAGGTGCTaGAAAAGAATGTCACGTTTG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYIGEYRC*KRMSRL
Trigger: CAAACGTGACATTCTTTTTCAGCACCTGTACTCACC...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR TCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATGGGAGCCAAAGAGGTaGGACCTCTCTTATATAATG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYIWEPKR*DLSYIM
Trigger: CATTATATAAGAGAGGTCTCACCTCTTTGGCTCCCA...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR TCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATAACAGCAACTTTCCCTTaGAGGAGATCTTCTACTCGA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYITATFP*RRSSTR
Trigger: TCGAGTAGAAGATCTCCTTCAAGGGAAAGTTGCTGT...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR GCA 90 bp TACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTAGAGCCACCTTTCTCTaGAGAAATGTTCCCCGTTGT +
Preference number: 4 (lower is better)
Translates to: YTHTHTRSTDGEYSCLYIRATFL*RNVPRC
Trigger: ACAACGGGGAACATTTCTGCAGAGAAAGGTGGCTCT...AATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATAGGTAGGTGTGATAGATaGAGAAGTACTCCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYIGRCDR*RSTPLY
Trigger: ATACAGGGGAGTACTTCTGCATCTATCACACCTACC...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp ATGACATTTATTCACTCAACTGAACACACACACACATACACACACACACACACAGACCACCACGATGACTaGTGTGCAGATGACCACCAG +
Preference number: 4 (lower is better)
Translates to: MTFIHSTEHTHTYTHTHTDHHDD*CADDHQ
Trigger: CTGGTGGTCATCTGCACAGCAGTCATCGTGGTGGTC...TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAATGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCGTATCTTCCAGAAGATaGCTCTGGTTGCTAACCAGT +
Preference number: 4 (lower is better)
Translates to: HTHTHAALMESTAAYIFIVSSRR*LWLLTS
Trigger: ACTGGTTAGCAACCAGAGGCATCTTCTGGAAGATAC...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATCACAGATAAGCCTATaGCAACTACCTCACCCCAAA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYISQISL*QLPHPK
Trigger: TTTGGGGTGAGGTAGTTGGCATAGGCTTATCTGTGA...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp ACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATCCAACCTCTTCATTCTaGCCTCCTTATCTGATAGAA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHAALMESTAAYPTSSF*PPYLIE
Trigger: TTCTATCAGATAAGGAGGGCAGAATGAAGAGGTTGG...ATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CCA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCTCGATCCTTGAAGGATaGGGAGATGTGCCACCCCAA +
Preference number: 4 (lower is better)
Translates to: THAALMESTAAYIFIYNSSILEG*GDVPPQ
Trigger: TTGGGGTGGCACATCTCCCCATCCTTCAAGGATCGA...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp ATGACATTTATTCACTCAACTGAACACACACACACATACACACACACACACACAATGGAATCTGGAACCTaGCACCGTGCTCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: MTFIHSTEHTHTYTHTHTMESGT*HRAQPL
Trigger: CAGTGGCTGAGCACGGTGCCAGGTTCCAGATTCCAT...TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAATGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp TTATTCACTCAACTGAACACACACACACATACACACACACACACACACGCAGCATCCAGAAGATGCCTCTaGTTGCTAACCAGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LFTQLNTHTHTHTHTHAASRRCL*LLTSLC
Trigger: ACAGAGACTGGTTAGCAACCAGAGGCATCTTCTGGA...TGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp CACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATCTCTTTCAGTTCCTTaGCCCATGAAAGAAAATCAG +
Preference number: 4 (lower is better)
Translates to: HTYTHTHTRSTDGEYSCLSLSVP*PMKENQ
Trigger: CTGATTTTCTTTCATGGGCCAAGGAACTGAAAGAGA...TAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp GCCCATGAAAGAAAATCAGTCACCAGTAAATCCAACCTCCCCGCTCATTCCTCTTTCTTCCAAAGGACTTaGAGCTCTGGACAGATTTCA +
Preference number: 4 (lower is better)
Translates to: AHERKSVTSKSNLPAHSSFFQRT*SSGQIS
Trigger: TGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAA...AGAGGAATGAGCGGGGAGGTTGGATTTACTGGTGACTGATTTTCTTTCATGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp CTTGCTTCACATTCTCTTTCAGTTCCTTGGCCCATGAAAGAAAATCAGTCACCACAGCTGATTTTCTCCTaGGGTCACCTTCCACAGAAT +
Preference number: 4 (lower is better)
Translates to: LASHSLSVPWPMKENQSPQLIFS*GHLPQN
Trigger: ATTCTGTGGAAGGTGACCTCAGGAGAAAATCAGCTG...TGGTGACTGATTTTCTTTCATGGGCCAAGGAACTGAAAGAGAATGTGAAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp ACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTATTTATTCACTCAACTaGACACACACACACATACAC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHAALMESTAIYSLN*THTHIH
Trigger: GTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAAT...AGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR TCA 90 bp TTATTCACTCAACTGAACACACACACACATACACACACACACACACACGCAGCACAGCAAAAGGAAACTTaGAATGCCTGCCCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: LFTQLNTHTHTHTHTHAAQQKET*NACPEN
Trigger: ATTCTCTGGGCAGGCATTTCAAGTTTCCTTTTGCTG...TGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp TACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTAGGCTGTCTAATGGATaGGTATGTCACAGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: YTHTHTRSTDGEYSCLYIRLSNG*VCHSKR
Trigger: CCTTTTGCTGTGACATACTCATCCATTAGACAGCCT...AATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp ACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATCCCATTTCAGTAACCTaGCCCATTTCTAACATCTAT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHAALMESTAAYPISVT*PISNIY
Trigger: ATAGATGTTAGAAATGGGTCAGGTTACTGAAATGGG...ATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCCTATCCCCAACTCTATaGCTTGTATACCCCTTATAC +
Preference number: 4 (lower is better)
Translates to: HTHTHAALMESTAAYIFILSPTL*LVYPLY
Trigger: GTATAAGGGGTATACAAGTCATAGAGTTGGGGATAG...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR TCA 90 bp TTATTCACTCAACTGAACACACACACACATACACACACACACACACACGCAGCATGCACAATGACCTCATaGGAGCTGGAAATGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LFTQLNTHTHTHTHTHAACTMTS*ELEMQR
Trigger: TCTTTGCATTTCCAGCTCTCATGAGGTCATTGTGCA...TGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR GCA 90 bp TTATTCACTCAACTGAACACACACACACATACACACACACACACACACGCAGCACCGTTGTTTCTATTGTaGCTGTCATCATTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LFTQLNTHTHTHTHTHAAPLFLL*LSSFLR
Trigger: CCTCAGGAATGATGACAGGCACAATAGAAACAACGG...TGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp GTTCATCTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCAAGATCAAGGCCCAAATaGTACGACTTGGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: VHLIFLPKDLELWTDFSSRSRPK*YDLAPC
Trigger: ACAGGGAGCCAAGTCGTAGCATTTGGGCCTTGATCT...TGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAGATGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp ACAGAAATAAGCGGTTCAGTTACCCCAACCCCAGCACAAAGTCGTCAGGGAGTGATTTTGCAAGAAAAATaGTGTAAACTGCCACAGCAA +
Preference number: 4 (lower is better)
Translates to: TEISGSVTPTPAQSRQGVILQEK*CKLPQQ
Trigger: TTGCTGTGGCAGTTTACAGCATTTTTCTTGCAAAAT...CACTCCCTGACGACTTTGTGCTGGGGTTGGGGTAACTGAACCGCTTATTTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp GTTCATCTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCATCTCAGTCCAACCTCTaGCGAATATACACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VHLIFLPKDLELWTDFSSSQSNL*RIYTSS
Trigger: GGAGGAGGTGTATATTCGGCAGAGGTTGGACTGAGA...TGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAGATGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCGATGCCTCCTGTCTCTaGCTAGAATCAAGGGCAACA +
Preference number: 4 (lower is better)
Translates to: THAALMESTAAYIFIYNSDASCL*LESRAT
Trigger: TGTTGCCCTTGATTCTAGGCAGAGACAGGAGGCATC...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATACATCCTGAAAATCTaGATCTGCACCCAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYIYILKI*ICTQKH
Trigger: ATGCTTCTGGGTGCAGATGCAGATTTTCAGGATGTA...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCTTCCAAAGGACTTaGAGCTCTGGACAGATTTCA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYIFFQRT*SSGQIS
Trigger: TGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAA...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp ATGACATTTATTCACTCAACTGAACACACACACACATACACACACACACACACATTTGGGGCTGTGAGTTaGACAAGTCTGGTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: MTFIHSTEHTHTYTHTHTFGAVS*TSLVRL
Trigger: AAGGCGGACCAGACTTGTCCAACTCACAGCCCCAAA...TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAATGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CCA 90 bp TACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTACAGTGCCTGGAAGATaGCAGGAGTTCAATACATCA +
Preference number: 4 (lower is better)
Translates to: YTHTHTRSTDGEYSCLYITVPGR*QEFNTS
Trigger: TGATGTATTGAACTCCTGCCATCTTCCAGGCACTGT...AATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CCA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCAGGTACACTCGTCTTTaGATTATAGTCAATCTATTG +
Preference number: 4 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSRYTRL*IIVNLL
Trigger: CAATAGATTGACTATAATCCAAAGACGAGTGTACCT...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR TCA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCCAGCTGATTTTCTCCTaGGGTCACCTTCCACAGAAT +
Preference number: 4 (lower is better)
Translates to: THAALMESTAAYIFIYNSQLIFS*GHLPQN
Trigger: ATTCTGTGGAAGGTGACCTCAGGAGAAAATCAGCTG...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR TCA 90 bp ATAATTATGTTAAATAACACCCAACTCTCAGTCCAACCTCTGCCGAATATACACTTCCTCCTGTCCAGCTaGTTTTCTCCTGAGGTCACC +
Preference number: 4 (lower is better)
Translates to: IIMLNNTQLSVQPLPNIHFLLSS*FSPEVT
Trigger: GGTGACCTCAGGAGAAAATCAGCTGGACAGGAGGAA...GTGTATATTCGGCAGAGGTTGGACTGAGAGTTGGGTGTTATTTAACATAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp ATAATTATGTTAAATAACACCCAACTCTCAGTCCAACCTCTGCCGAATATACACAAATCTGAAGTTTGCTaGCTCCCTTGGTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: IIMLNNTQLSVQPLPNIHKSEVC*LPWCQG
Trigger: GCCCTGGCACCAAGGGAGTCAGCAAACTTCAGATTT...GTGTATATTCGGCAGAGGTTGGACTGAGAGTTGGGTGTTATTTAACATAATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp CTTGCTTCACATTCTCTTTCAGTTCCTTGGCCCATGAAAGAAAATCAGTCACCAAGGCTGTCTAATGGATaGGTATGTCACAGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: LASHSLSVPWPMKENQSPRLSNG*VCHSKR
Trigger: CCTTTTGCTGTGACATACTCATCCATTAGACAGCCT...TGGTGACTGATTTTCTTTCATGGGCCAAGGAACTGAAAGAGAATGTGAAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp TTATTCACTCAACTGAACACACACACACATACACACACACACACACACGCAGCAGGCTCAAGAGTGTATTaGTGCAGAAAAGGTAGATCA +
Preference number: 4 (lower is better)
Translates to: LFTQLNTHTHTHTHTHAAGSRVY*CRKGRS
Trigger: TGATCTACCTTTTCTGCATCAATACACTCTTGAGCC...TGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCCCCATCTTAAGTGGTTaGTGGCCACATGTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: THAALMESTAAYIFIYNSPILSG*WPHVES
Trigger: ACTTTCCACATGTGGCCATCAACCACTTAAGATGGG...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp CTTGCTTCACATTCTCTTTCAGTTCCTTGGCCCATGAAAGAAAATCAGTCACCACCGTTGTTTCTATTGTaGCTGTCATCATTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LASHSLSVPWPMKENQSPPLFLL*LSSFLR
Trigger: CCTCAGGAATGATGACAGGCACAATAGAAACAACGG...TGGTGACTGATTTTCTTTCATGGGCCAAGGAACTGAAAGAGAATGTGAAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp ATGACATTTATTCACTCAACTGAACACACACACACATACACACACACACACACATCTCAGTCCAACCTCTaGCGAATATACACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: MTFIHSTEHTHTYTHTHTSQSNL*RIYTSS
Trigger: GGAGGAGGTGTATATTCGGCAGAGGTTGGACTGAGA...TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAATGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp ATGACATTTATTCACTCAACTGAACACACACACACATACACACACACACACACAGATGCCTCCTGTCTCTaGCTAGAATCAAGGGCAACA +
Preference number: 4 (lower is better)
Translates to: MTFIHSTEHTHTYTHTHTDASCL*LESRAT
Trigger: TGTTGCCCTTGATTCTAGGCAGAGACAGGAGGCATC...TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAATGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp ACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATTGCCATAATGCAAAATaGAATAGAACGAAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHAALMESTAAYCHNAK*NRTKRP
Trigger: TGGCCTTTTCGTTCTATTCCATTTTGCATTATGGCA...ATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp ATAATTATGTTAAATAACACCCAACTCTCAGTCCAACCTCTGCCGAATATACACGTTGATGGCCACATGTaGAAAGTGGCTACGTGGTGG +
Preference number: 4 (lower is better)
Translates to: IIMLNNTQLSVQPLPNIHVDGHM*KVATWW
Trigger: CCACCACGTAGCCACTTTCCACATGTGGCCATCAAC...GTGTATATTCGGCAGAGGTTGGACTGAGAGTTGGGTGTTATTTAACATAATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp ACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATATGGGACAAAGGTCTTaGACAAACACAGCAACTTTC +
Preference number: 4 (lower is better)
Translates to: THTHTRSTDGEYSCLYIHMGQRS*TNTATF
Trigger: GAAAGTTGCTGTGTTTGTCCAAGACCTTTGTCCCAT...ATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR TCA 90 bp ACTCACCCTAGGCCTGCCATAATGCAAAATGGAATAGAACGAAAAGGCCAAGGAATTTATTCACTCAACTaGACACACACACACATACAC +
Preference number: 4 (lower is better)
Translates to: THPRPAIMQNGIERKGQGIYSLN*THTHIH
Trigger: GTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAAT...TCCTTGGCCTTTTCGTTCTATTCCATTTTGCATTATGGCAGGCCTAGGGTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp ATGACATTTATTCACTCAACTGAACACACACACACATACACACACACACACACACCATGTTGTACATCCTaGAAATCTGCATCTGCACCC +
Preference number: 4 (lower is better)
Translates to: MTFIHSTEHTHTYTHTHTPCCTS*KSASAP
Trigger: GGGTGCAGATGCAGATTTTCAGGATGTACAACATGG...TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAATGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR TCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATACTTGTTTATCTGGACTaGGACTTTATTGAATTCTGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYILVYLD*DFIEFW
Trigger: CCAGAATTCAATAAAGTCTCAGTCCAGATAAACAAG...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR GCA 90 bp TCATCTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCATTAGAGCCACCTTTCTCTaGAGAAATGTTCCCCGTTGT +
Preference number: 4 (lower is better)
Translates to: SSNLSSKGLGALDRFQFIRATFL*RNVPRC
Trigger: ACAACGGGGAACATTTCTGCAGAGAAAGGTGGCTCT...AATGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp ACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATAAAAATGCTGTAAACTaGCACAGCAAACAACAACAT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHAALMESTAAYKNAVN*HSKQQH
Trigger: ATGTTGTTGTTTGCTGTGGCAGTTTACAGCATTTTT...ATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp TCATCTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCATTGTGTCTTTGGGCTTCTaGTTCTCCAAAGTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SSNLSSKGLGALDRFQFIVSLGF*FSKVFP
Trigger: AGGGAAGACTTTGGAGAAGCAGAAGCCCAAAGACAC...AATGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486257.5
CDS-3UTR GCA 90 bp TACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCAAGAGATGCCTTaGCTTTCAATAGCTACAAAG +
Preference number: 4 (lower is better)
Translates to: YTHTHTRSTDGEYSCLYIHQEMP*LSIATK
Trigger: CTTTGTAGCTATTGAAAGGCAAGGCATCTCTTGATG...AATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CCA 90 bp ACTCACCCTAGGCCTGCCATAATGCAAAATGGAATAGAACGAAAAGGCCAAGGATGCCATAATGCAAAATaGAATAGAACGAAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: THPRPAIMQNGIERKGQGCHNAK*NRTKRP
Trigger: TGGCCTTTTCGTTCTATTCCATTTTGCATTATGGCA...TCCTTGGCCTTTTCGTTCTATTCCATTTTGCATTATGGCAGGCCTAGGGTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATAGTGGACACTAGGATTTaGGCTATAAAAATTTACAGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYIVDTRI*AIKIYS
Trigger: GCTGTAAATTTTTATAGCCCAAATCCTAGTGTCCAC...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR TCA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCCCAGAGAATAAAATCTaGAGTTTGCTGACTCCCTTG +
Preference number: 4 (lower is better)
Translates to: THAALMESTAAYIFIYNSPENKI*SLLTPL
Trigger: CAAGGGAGTCAGCAAACTTCAGATTTTATTCTCTGG...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp CTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCATTCTTCGGCTCAAGAGTGTATTaGTGCAGAAAAGGTAGATCA +
Preference number: 4 (lower is better)
Translates to: LIFLPKDLELWTDFSSFFGSRVY*CRKGRS
Trigger: TGATCTACCTTTTCTGCATCAATACACTCTTGAGCC...GAAGAATGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCAGTCATCCTGTTTGGTaGCCTTGGAAAACTTTCTCA +
Preference number: 4 (lower is better)
Translates to: THAALMESTAAYIFIYNSSHPVW*PWKTFS
Trigger: TGAGAAAGTTTTCCAAGGTCACCAAACAGGATGACT...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR GCA 90 bp TCATCTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCATTGTATCTTCCAGAAGATaGCTCTGGTTGCTAACCAGT +
Preference number: 4 (lower is better)
Translates to: SSNLSSKGLGALDRFQFIVSSRR*LWLLTS
Trigger: ACTGGTTAGCAACCAGAGGCATCTTCTGGAAGATAC...AATGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp TCATCTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCATTTCACAGATAAGCCTATaGCAACTACCTCACCCCAAA +
Preference number: 4 (lower is better)
Translates to: SSNLSSKGLGALDRFQFISQISL*QLPHPK
Trigger: TTTGGGGTGAGGTAGTTGGCATAGGCTTATCTGTGA...AATGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATAATTTTGCAAGAAAAATaGTGTAAACTGCCACAGCAA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHAALMESTAAYIILQEK*CKLPQQ
Trigger: TTGCTGTGGCAGTTTACAGCATTTTTCTTGCAAAAT...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp ATGACATTTATTCACTCAACTGAACACACACACACATACACACACACACACACATCACCTTCCACAGAATaGATTCTGAGGGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: MTFIHSTEHTHTYTHTHTSPSTE*ILRAFF
Trigger: GAAGAAAGCCCTCAGAATCCATTCTGTGGAAGGTGA...TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAATGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CCA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCAAGGACTTGGAGCTCTaGACAGATTTCAGTTCATTC +
Preference number: 4 (lower is better)
Translates to: THAALMESTAAYIFIYNSKDLEL*TDFSSF
Trigger: GAATGAACTGAAATCTGTCCAGAGCTCCAAGTCCTT...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCCCCATTTCAGTAACCTaGCCCATTTCTAACATCTAT +
Preference number: 4 (lower is better)
Translates to: THAALMESTAAYIFIYNSPISVT*PISNIY
Trigger: ATAGATGTTAGAAATGGGTCAGGTTACTGAAATGGG...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR GCA 90 bp TACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTAAAAATGCTGTAAACTaGCACAGCAAACAACAACAT +
Preference number: 4 (lower is better)
Translates to: YTHTHTRSTDGEYSCLYIKNAVN*HSKQQH
Trigger: ATGTTGTTGTTTGCTGTGGCAGTTTACAGCATTTTT...AATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp TCATCTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCATTAAGGACTTGGAGCTCTaGACAGATTTCAGTTCATTC +
Preference number: 4 (lower is better)
Translates to: SSNLSSKGLGALDRFQFIKDLEL*TDFSSF
Trigger: GAATGAACTGAAATCTGTCCAGAGCTCCAAGTCCTT...AATGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCATTTATTCACTCAACTaGACACACACACACATACAC +
Preference number: 4 (lower is better)
Translates to: THAALMESTAAYIFIYNSIYSLN*THTHIH
Trigger: GTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAAT...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR GCA 90 bp ATAATTATGTTAAATAACACCCAACTCTCAGTCCAACCTCTGCCGAATATACACCGCAAGACACAACCTTaGTTCACATTCTCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: IIMLNNTQLSVQPLPNIHRKTQP*FTFSFS
Trigger: ACTGAAAGAGAATGTGAAGCAAGGTTGTGTCTTGCG...GTGTATATTCGGCAGAGGTTGGACTGAGAGTTGGGTGTTATTTAACATAATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR TCA 90 bp ATAATTATGTTAAATAACACCCAACTCTCAGTCCAACCTCTGCCGAATATACACCTGCCTTTGAATGAGTaGAAGTTACTGAAAATGACG +
Preference number: 4 (lower is better)
Translates to: IIMLNNTQLSVQPLPNIHLPLNE*KLLKMT
Trigger: CGTCATTTTCAGTAACTTTCACTCATTCAAAGGCAG...GTGTATATTCGGCAGAGGTTGGACTGAGAGTTGGGTGTTATTTAACATAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CCA 90 bp ATAATTATGTTAAATAACACCCAACTCTCAGTCCAACCTCTGCCGAATATACACTCTCTTTCAGTTCCTTaGCCCATGAAAGAAAATCAG +
Preference number: 4 (lower is better)
Translates to: IIMLNNTQLSVQPLPNIHSLSVP*PMKENQ
Trigger: CTGATTTTCTTTCATGGGCCAAGGAACTGAAAGAGA...GTGTATATTCGGCAGAGGTTGGACTGAGAGTTGGGTGTTATTTAACATAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS CCA 90 bp ATCGTTCACGGTCAGCGACTGGAGGGTGAGGCCCAGGCCGGGACCTaGGGCCACTCGATCCTTGAAGGATGGGGAGATGTGCCACCCCAA +
Preference number: 5 (lower is better)
Translates to: IVHGQRLEGEAQAGT*GHSILEGWGDVPPQ
Trigger: TTGGGGTGGCACATCTCCCCATCCTTCAAGGATCGAGTGGCCCCAGGTCCCGGCCTGGGCCTCACCCTCCAGTCGCTGACCGTGAACGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383671.8
ENST00000461158.5
ENST00000481065.5
ENST00000484319.1
ENST00000485814.1
ENST00000486257.5
CDS GCA 90 bp CCTGCCTCAGCCCCTGGGCCCAGATCAGGAGGAGACACCAGCGCATaGTTCTGCCCAGAGGGCCTACAGGAAGCAGATGTGGCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: PASAPGPRSGGDTSA*FCPEGLQEADVASS
Trigger: AGAAGAGGCCACATCTGCTTCCTGTAGGCCCTCTGGGCAGAAGCATGCGCTGGTGTCTCCTCCTGATCTGGGCCCAGGGGCTGAGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481065.5
ENST00000486257.5
CDS CCA 90 bp ACGGTCCTGAAAACCTGTGGCCCGCAGCCCTCAGCCAAGCGGGGCTaGGAGTGGTGGTACCTTCCACAAGATCGGTGGCTTGTACACGGG +
Preference number: 5 (lower is better)
Translates to: TVLKTCGPQPSAKRG*EWWYLPQDRWLVHG
Trigger: CCCGTGTACAAGCCACCGATCTTGTGGAAGGTACCACCACTCCCAGCCCCGCTTGGCTGAGGGCTGCGGGCCACAGGTTTTCAGGACCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS GCA 90 bp TCAGCCCCTGGGCCCAGATCAGGAGGAGACACCAGCGCATGCTTCTaGCCAGAGGGCCTACAGGAAGCAGATGTGGCCTCTTCTGCCACT +
Preference number: 5 (lower is better)
Translates to: SAPGPRSGGDTSACF*PEGLQEADVASSAT
Trigger: AGTGGCAGAAGAGGCCACATCTGCTTCCTGTAGGCCCTCTGGGCAGAAGCATGCGCTGGTGTCTCCTCCTGATCTGGGCCCAGGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481065.5
ENST00000486257.5
CDS CCA 90 bp CAGATGACCACCAGCGTCGCGGCCATGGCTCCAAGCAATGGAATCTaGAACCTGGCACCGTGCTCAGCCACTGAGCTTTCTAGGACCTCC +
Preference number: 5 (lower is better)
Translates to: QMTTSVAAMAPSNGI*NLAPCSATELSRTS
Trigger: GGAGGTCCTAGAAAGCTCAGTGGCTGAGCACGGTGCCAGGTTCCAGATTCCATTGCTTGGAGCCATGGCCGCGACGCTGGTGGTCATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383671.8
ENST00000461158.5
ENST00000481065.5
ENST00000484319.1
ENST00000486257.5
CDS GCA 90 bp TGCCACCCCAAGTCAGCATTACAAATGGCCAGAAGCTGGTCCTGCTaGTCCCAGTTGACCTGGGTCACTTGTGCCGTGGTGGAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: CHPKSALQMARSWSC*SQLTWVTCAVVEER
Trigger: CCTCTCCTCCACCACGGCACAAGTGACCCAGGTCAACTGGGAGCAGCAGGACCAGCTTCTGGCCATTTGTAATGCTGACTTGGGGTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383671.8
ENST00000461158.5
ENST00000481065.5
ENST00000484319.1
ENST00000485814.1
ENST00000486257.5
CDS CCA 90 bp GGGGAGATGTGCCACCCCAAGTCAGCATTACAAATGGCCAGAAGCTaGTCCTGCTGCTCCCAGTTGACCTGGGTCACTTGTGCCGTGGTG +
Preference number: 5 (lower is better)
Translates to: GEMCHPKSALQMARS*SCCSQLTWVTCAVV
Trigger: CACCACGGCACAAGTGACCCAGGTCAACTGGGAGCAGCAGGACCAGCTTCTGGCCATTTGTAATGCTGACTTGGGGTGGCACATCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383671.8
ENST00000461158.5
ENST00000481065.5
ENST00000484319.1
ENST00000485814.1
ENST00000486257.5
CDS CCA 90 bp CTGGAGGGATGTTTCCCAAACTCACTAAGGCCGGGGAGCCAGGAGTaGCAGGGCCAAGAGCAGCTAGTGGGACTAGAGCACAGAAAGTGG +
Preference number: 5 (lower is better)
Translates to: LEGCFPNSLRPGSQE*QGQEQLVGLEHRKW
Trigger: CCACTTTCTGTGCTCTAGTCCCACTAGCTGCTCTTGGCCCTGCCACTCCTGGCTCCCCGGCCTTAGTGAGTTTGGGAAACATCCCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CAA 90 bp TCCTGCTCCTCCCAGACTAGCCTCAACATCCCCTTGGTGCTCCCAGGCCACTTCGTGCCAGGGCCTTCTTaGTGGGACTTTCAGCTCCAA +
Preference number: 5 (lower is better)
Translates to: SCSSQTSLNIPLVLPGHFVPGPS*WDFQLQ
Trigger: TTGGAGCTGAAAGTCCCACAAAGAAGGCCCTGGCAC...GAAGTGGCCTGGGAGCACCAAGGGGATGTTGAGGCTAGTCTGGGAGGAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS GCA 90 bp ATGTGCCACCCCAAGTCAGCATTACAAATGGCCAGAAGCTGGTCCTaGTGCTCCCAGTTGACCTGGGTCACTTGTGCCGTGGTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: MCHPKSALQMARSWS*CSQLTWVTCAVVEE
Trigger: CTCCTCCACCACGGCACAAGTGACCCAGGTCAACTGGGAGCAGCAGGACCAGCTTCTGGCCATTTGTAATGCTGACTTGGGGTGGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383671.8
ENST00000461158.5
ENST00000481065.5
ENST00000484319.1
ENST00000485814.1
ENST00000486257.5
CDS CCA 90 bp TCAGCCAAGCGGGGCTGGGAGTGGTGGTACCTTCCACAAGATCGGTaGCTTGTACACGGGAAACACAACCTAGGGTTCTCCCAGAGCACA +
Preference number: 5 (lower is better)
Translates to: SAKRGWEWWYLPQDR*LVHGKHNLGFSQST
Trigger: TGTGCTCTGGGAGAACCCTAGGTTGTGTTTCCCGTGTACAAGCCACCGATCTTGTGGAAGGTACCACCACTCCCAGCCCCGCTTGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CAA 90 bp CACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTACCGGGCCAGCCGCACTaGAGTCCACAGCCTCCAACC +
Preference number: 5 (lower is better)
Translates to: HTYTHTHTRSTDGEYSCLPGQPH*SPQPPT
Trigger: GGTTGGAGGCTGTGGACTCAAGTGCGGCTGGCCCGG...TAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS GCA 90 bp TCTGAGGGCTTTCTTCTTTCTAGTCAACGCGACCACCACGATGACTaGTGTGCAGATGACCACCAGCGTCGCGGCCATGGCTCCAAGCAA +
Preference number: 5 (lower is better)
Translates to: SEGFLLSSQRDHHDD*CADDHQRRGHGSKQ
Trigger: TTGCTTGGAGCCATGGCCGCGACGCTGGTGGTCATCTGCACAGCAGTCATCGTGGTGGTCGCGTTGACTAGAAAGAAGAAAGCCCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383671.8
ENST00000461158.5
ENST00000481065.5
ENST00000484319.1
ENST00000486257.5
CDS CCA 90 bp TCCCAGCAGTGTCTTTGGGCTTCTGCTTCTCCAAAGTCTTCCCTCTaGCTCAGAAGTGGTAGGGGAGCTCCATGGCTGTCACAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: SQQCLWASASPKSSL*LRSGRGAPWLSQLS
Trigger: AGACAGCTGTGACAGCCATGGAGCTCCCCTACCACTTCTGAGCCAGAGGGAAGACTTTGGAGAAGCAGAAGCCCAAAGACACTGCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CAA 90 bp CACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTCCTGCTGCTCCCAGTaGACCTGGGTCACTTGTGCC +
Preference number: 5 (lower is better)
Translates to: HTHTYTHTHTRSTDGEYSSCCSQ*TWVTCA
Trigger: GGCACAAGTGACCCAGGTCAACTGGGAGCAGCAGGA...GCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS TCA 90 bp GGGGCTGTGAGTTGGACAAGTCTGGTCCGCCTTGATGCAGCTGGGTaGGTACAGGTGCTGAAAAAGAATGTCACGTTTGCCCGTGAAAGG +
Preference number: 5 (lower is better)
Translates to: GAVSWTSLVRLDAAG*VQVLKKNVTFARER
Trigger: CCTTTCACGGGCAAACGTGACATTCTTTTTCAGCACCTGTACTCACCCAGCTGCATCAAGGCGGACCAGACTTGTCCAACTCACAGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS GCA 90 bp GGAAGATTCTCCCAGTGTACGTCCCATCAGGGTAGGTGTGATAGATaGAGAAGTACTCCCCTGTATCGTTCACGGTCAGCGACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: GRFSQCTSHQGRCDR*RSTPLYRSRSATGG
Trigger: CCCTCCAGTCGCTGACCGTGAACGATACAGGGGAGTACTTCTGCATCTATCACACCTACCCTGATGGGACGTACACTGGGAGAATCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383671.8
ENST00000461158.5
ENST00000481065.5
ENST00000484319.1
ENST00000485814.1
ENST00000486257.5
CDS CCA 90 bp CCTAGGGTTCTCCCAGAGCACAGACCAATCTCCCAGCAGTGTCTTTaGGCTTCTGCTTCTCCAAAGTCTTCCCTCTGGCTCAGAAGTGGT +
Preference number: 5 (lower is better)
Translates to: PRVLPEHRPISQQCL*ASASPKSSLWLRSG
Trigger: ACCACTTCTGAGCCAGAGGGAAGACTTTGGAGAAGCAGAAGCCCAAAGACACTGCTGGGAGATTGGTCTGTGCTCTGGGAGAACCCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CAA 90 bp ATGTGCGTTTCCTGGGGCTTCCCCAGCACACACGGCCGGAAGAGGCTACAGGCCTTCTCTTTCAGTTCCTaGGCCCATGAAAGAAAATCA +
Preference number: 5 (lower is better)
Translates to: MCVSWGFPSTHGRKRLQAFSFSS*AHERKS
Trigger: TGATTTTCTTTCATGGGCCAAGGAACTGAAAGAGAA...GGCCTGTAGCCTCTTCCGGCCGTGTGTGCTGGGGAAGCCCCAGGAAACGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS GCA 90 bp CCTGTCATCATTCCTCAGATGGAAATGCAGAAATCACCCGTCTTCTaGGTCGCTCAGGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTC +
Preference number: 5 (lower is better)
Translates to: PVIIPQMEMQKSPVF*VAQAGSCRPELFLF
Trigger: GAATAGGAACAGCTCCGGTCTACAGCTCCCAGCCTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGAATGATGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461158.5
CDS-3UTR CAA 90 bp CACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTACAAGTCTGGTCCGCCTaGATGCAGCTGGGTGAGTAC +
Preference number: 5 (lower is better)
Translates to: HTYTHTHTRSTDGEYSCLQVWSA*MQLGEY
Trigger: GTACTCACCCAGCTGCATCAAGGCGGACCAGACTTG...TAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS TCA 90 bp GATAGCATGTTTCTGCAGGAAAGTGACCACTTGCCAGCTAGACCCTaGGGCTGCCTTGGAGGAAAGCAAATGACAGAAGTCTCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: DSMFLQESDHLPARP*GCLGGKQMTEVSPQ
Trigger: CTGGGGAGAGACTTCTGTCATTTGCTTTCCTCCAAGGCAGCCTCAGGGTCTAGCTGGCAAGTGGTCACTTTCCTGCAGAAACATGCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS TCA 90 bp CAGAGGAGATTAGAGGAGAGAGCTTTCCTGTGCACAATGACCTCATaGGAGCTGGAAATGCAAAGAAGGGTGAGCCCCTGGGAGCCTCAA +
Preference number: 5 (lower is better)
Translates to: QRRLEERAFLCTMTS*ELEMQRRVSPWEPQ
Trigger: TTGAGGCTCCCAGGGGCTCACCCTTCTTTGCATTTCCAGCTCTCATGAGGTCATTGTGCACAGGAAAGCTCTCTCCTCTAATCTCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS GCA 90 bp CACATTCACCTGCCTCGCAGGCTCTCAACACAGTTGCCTTGGGGATaGTCCATGTTGTACATCCTGAAAATCTGCATCTGCACCCAGAAG +
Preference number: 5 (lower is better)
Translates to: HIHLPRRLSTQLPWG*SMLYILKICICTQK
Trigger: CTTCTGGGTGCAGATGCAGATTTTCAGGATGTACAACATGGAGCATCCCCAAGGCAACTGTGTTGAGAGCCTGCGAGGCAGGTGAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CAA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATAAGCCTCAACATCCCCTaGGTGCTCCCAGGCCACTTC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHAALMESTAAYISLNIP*VLPGHF
Trigger: GAAGTGGCCTGGGAGCACCAAGGGGATGTTGAGGCT...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS TCA 90 bp TGCTCCCAGTTGACCTGGGTCACTTGTGCCGTGGTGGAGGAGAGGTaGCATTGTAAGATGATAGAGCCACCTTTCTCTGCAGAAATGTTC +
Preference number: 5 (lower is better)
Translates to: CSQLTWVTCAVVEER*HCKMIEPPFSAEMF
Trigger: GAACATTTCTGCAGAGAAAGGTGGCTCTATCATCTTACAATGTCACCTCTCCTCCACCACGGCACAAGTGACCCAGGTCAACTGGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383671.8
ENST00000461158.5
ENST00000481065.5
ENST00000484319.1
ENST00000485814.1
ENST00000486257.5
CDS GCA 90 bp AGTCTCCAGACTCCAAGGCCAGGGTTCCACCCAACCTCTTCATTCTaGCCTCCTTATCTGATAGAACAGGAGGATAGCATGTTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: SLQTPRPGFHPTSSF*PPYLIEQEDSMFLQ
Trigger: CTGCAGAAACATGCTATCCTCCTGTTCTATCAGATAAGGAGGGCAGAATGAAGAGGTTGGGTGGAACCCTGGCCTTGGAGTCTGGAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS CCA 90 bp AAGATCCACATTCACCTGCCTCGCAGGCTCTCAACACAGTTGCCTTaGGGATGCTCCATGTTGTACATCCTGAAAATCTGCATCTGCACC +
Preference number: 5 (lower is better)
Translates to: KIHIHLPRRLSTQLP*GCSMLYILKICICT
Trigger: GGTGCAGATGCAGATTTTCAGGATGTACAACATGGAGCATCCCCAAGGCAACTGTGTTGAGAGCCTGCGAGGCAGGTGAATGTGGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CAA 90 bp ACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATGGGGCCACTCGATCCTaGAAGGATGGGGAGATGTGC +
Preference number: 5 (lower is better)
Translates to: THTHTRSTDGEYSCLYIHGATRS*KDGEMC
Trigger: GCACATCTCCCCATCCTTCAAGGATCGAGTGGCCCC...ATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CAA 90 bp ACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTCTCCCAGCAGTGTCTTaGGGCTTCTGCTTCTCCAAA +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHAALMESTALPAVS*GFCFSK
Trigger: TTTGGAGAAGCAGAAGCCCAAAGACACTGCTGGGAG...AGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CAA 90 bp ACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCCCAAATGCTACGACTaGGCTCCCTGTGTGGGCATG +
Preference number: 5 (lower is better)
Translates to: THTHTRSTDGEYSCLYIHPKCYD*APCVGM
Trigger: CATGCCCACACAGGGAGCCAAGTCGTAGCATTTGGG...ATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CAA 90 bp ACACACACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTTACCCTCCTTCTCCCTaGCAAGGTCTTCTATCTCAG +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHAALMESTAYPPSP*QGLLSQ
Trigger: CTGAGATAGAAGACCTTGCAAGGGAGAAGGAGGGTA...AGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CAA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCGGGGCCACTCGATCCTaGAAGGATGGGGAGATGTGC +
Preference number: 5 (lower is better)
Translates to: THAALMESTAAYIFIYNSGATRS*KDGEMC
Trigger: GCACATCTCCCCATCCTTCAAGGATCGAGTGGCCCC...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CAA 90 bp CACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTAAGAAGATGCCTCTGGTaGCTAACCAGTCTCTGTGAA +
Preference number: 5 (lower is better)
Translates to: HTYTHTHTRSTDGEYSCLRRCLW*LTSLCE
Trigger: TTCACAGAGACTGGTTAGCAACCAGAGGCATCTTCT...TAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CAA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCAGCCTCAACATCCCCTaGGTGCTCCCAGGCCACTTC +
Preference number: 5 (lower is better)
Translates to: THAALMESTAAYIFIYNSSLNIP*VLPGHF
Trigger: GAAGTGGCCTGGGAGCACCAAGGGGATGTTGAGGCT...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CAA 90 bp ACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATAGTTTGCTGACTCCCTaGGTGCCAGGGCCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: THTHTRSTDGEYSCLYIHSLLTP*VPGPSL
Trigger: CAAAGAAGGCCCTGGCACCAAGGGAGTCAGCAAACT...ATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CAA 90 bp TTATTCACTCAACTGAACACACACACACATACACACACACACACACACGCAGCAAGTTTGCTGACTCCCTaGGTGCCAGGGCCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: LFTQLNTHTHTHTHTHAASLLTP*VPGPSL
Trigger: CAAAGAAGGCCCTGGCACCAAGGGAGTCAGCAAACT...TGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CAA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCCTCCCAGCAGTGTCTTaGGGCTTCTGCTTCTCCAAA +
Preference number: 5 (lower is better)
Translates to: HTHTHAALMESTAAYIFILPAVS*GFCFSK
Trigger: TTTGGAGAAGCAGAAGCCCAAAGACACTGCTGGGAG...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CAA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCACTGATGAGGAACTGTaGGCTGAGCTCCTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: HTHTHAALMESTAAYIFITDEEL*AELLWH
Trigger: ATGCCAGAGGAGCTCAGCCAACAGTTCCTCATCAGT...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CAA 90 bp GCCCATGAAAGAAAATCAGTCACCAGTAAATCCAACCTCCCCGCTCATTCCTCTTCCCCGTTGTTTCTATaGTGCCTGTCATCATTCCTG +
Preference number: 5 (lower is better)
Translates to: AHERKSVTSKSNLPAHSSSPLFL*CLSSFL
Trigger: CAGGAATGATGACAGGCACAATAGAAACAACGGGGA...AGAGGAATGAGCGGGGAGGTTGGATTTACTGGTGACTGATTTTCTTTCATGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CAA 90 bp ATGACATTTATTCACTCAACTGAACACACACACACATACACACACACACACACATCCTGCTGCTCCCAGTaGACCTGGGTCACTTGTGCC +
Preference number: 5 (lower is better)
Translates to: MTFIHSTEHTHTYTHTHTSCCSQ*TWVTCA
Trigger: GGCACAAGTGACCCAGGTCAACTGGGAGCAGCAGGA...TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAATGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CAA 90 bp ATGACATTTATTCACTCAACTGAACACACACACACATACACACACACACACACAGGGGCCACTCGATCCTaGAAGGATGGGGAGATGTGC +
Preference number: 5 (lower is better)
Translates to: MTFIHSTEHTHTYTHTHTGATRS*KDGEMC
Trigger: GCACATCTCCCCATCCTTCAAGGATCGAGTGGCCCC...TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAATGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CAA 90 bp GCCCATGAAAGAAAATCAGTCACCAGTAAATCCAACCTCCCCGCTCATTCCTCTGCGCAAGACACAACCTaGCTTCACATTCTCTTTCAG +
Preference number: 5 (lower is better)
Translates to: AHERKSVTSKSNLPAHSSAQDTT*LHILFQ
Trigger: CTGAAAGAGAATGTGAAGCAAGGTTGTGTCTTGCGC...AGAGGAATGAGCGGGGAGGTTGGATTTACTGGTGACTGATTTTCTTTCATGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CAA 90 bp TTATTCACTCAACTGAACACACACACACATACACACACACACACACACGCAGCACACAAGATCGGTGGCTaGTACACGGGAAACACAACC +
Preference number: 5 (lower is better)
Translates to: LFTQLNTHTHTHTHTHAAHKIGG*YTGNTT
Trigger: GGTTGTGTTTCCCGTGTACAAGCCACCGATCTTGTG...TGCTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CAA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCCTCAACACAGTTGCCTaGGGGATGCTCCATGTTGTA +
Preference number: 5 (lower is better)
Translates to: HTHTHAALMESTAAYIFILNTVA*GMLHVV
Trigger: TACAACATGGAGCATCCCCAAGGCAACTGTGTTGAG...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CAA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCGGCCAGGGACTGCACTaGAAATCTAATGAACAGGTG +
Preference number: 5 (lower is better)
Translates to: HTHTHAALMESTAAYIFIGQGLH*KSNEQV
Trigger: CACCTGTTCATTAGATTTCAAGTGCAGTCCCTGGCC...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CAA 90 bp ACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATCAGAAATGTTCCCCGTaGTTTCTATTGTGCCTGTCA +
Preference number: 5 (lower is better)
Translates to: THTHTHTHAALMESTAAYQKCSP*FLLCLS
Trigger: TGACAGGCACAATAGAAACAACGGGGAACATTTCTG...ATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CAA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATAAGAAGATGCCTCTGGTaGCTAACCAGTCTCTGTGAA +
Preference number: 5 (lower is better)
Translates to: HTHTHTHAALMESTAAYIRRCLW*LTSLCE
Trigger: TTCACAGAGACTGGTTAGCAACCAGAGGCATCTTCT...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CAA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCGTGCCAGGGCCTTCTTaGTGGGACTTTCAGCTCCAA +
Preference number: 5 (lower is better)
Translates to: THAALMESTAAYIFIYNSVPGPS*WDFQLQ
Trigger: TTGGAGCTGAAAGTCCCACAAAGAAGGCCCTGGCAC...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CAA 90 bp ACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCCCCATCTTAAGTGGTaGATGGCCACATGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: THTHTRSTDGEYSCLYIHPHLKW*MATCGK
Trigger: CTTTCCACATGTGGCCATCAACCACTTAAGATGGGG...ATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CAA 90 bp TACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCCCCATCTTAAGTGGTaGATGGCCACATGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: YTHTHTRSTDGEYSCLYIPHLKW*MATCGK
Trigger: CTTTCCACATGTGGCCATCAACCACTTAAGATGGGG...AATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CAA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCTTTTGGGGCTGTGAGTaGGACAAGTCTGGTCCGCCT +
Preference number: 5 (lower is better)
Translates to: THAALMESTAAYIFIYNSFWGCE*DKSGPP
Trigger: AGGCGGACCAGACTTGTCCAACTCACAGCCCCAAAA...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CAA 90 bp ACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATTCCTGTTTGGTGACCTaGGAAAACTTTCTCAACCTC +
Preference number: 5 (lower is better)
Translates to: THTHTHTHAALMESTAAYSCLVT*ENFLNL
Trigger: GAGGTTGAGAAAGTTTTCCAAGGTCACCAAACAGGA...ATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CAA 90 bp CACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTAATGGTCAAGTCCATTTaGATCAATGGTGCTCTAGAG +
Preference number: 5 (lower is better)
Translates to: HTYTHTHTRSTDGEYSCLMVKSI*INGALE
Trigger: CTCTAGAGCACCATTGATCAAAATGGACTTGACCAT...TAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CAA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTGGGGATGCTCCATGTaGTACATCCTGAAAATCTGC +
Preference number: 5 (lower is better)
Translates to: HTHTHAALMESTAAYIFIWGCSM*YILKIC
Trigger: GCAGATTTTCAGGATGTACAACATGGAGCATCCCCA...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS TCA 90 bp CCTCGGCATCAGTATGATTTAAAATCTCCTCAGGTGATTCAAATGTaGTCCCGAATTGAGAAGCCCTGCTGTGCAGTGTTTCAGGATTGC +
Preference number: 5 (lower is better)
Translates to: PRHQYDLKSPQVIQM*SRIEKPCCAVFQDC
Trigger: GCAATCCTGAAACACTGCACAGCAGGGCTTCTCAATTCGGGATCACATTTGAATCACCTGAGGAGATTTTAAATCATACTGATGCCGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485814.1
CDS-3UTR CAA 90 bp ACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATTCCCCGTTGTTTCTATaGTGCCTGTCATCATTCCTG +
Preference number: 5 (lower is better)
Translates to: THTHTRSTDGEYSCLYIHSPLFL*CLSSFL
Trigger: CAGGAATGATGACAGGCACAATAGAAACAACGGGGA...ATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CAA 90 bp ACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATGCGCAAGACACAACCTaGCTTCACATTCTCTTTCAG +
Preference number: 5 (lower is better)
Translates to: THTHTRSTDGEYSCLYIHAQDTT*LHILFQ
Trigger: CTGAAAGAGAATGTGAAGCAAGGTTGTGTCTTGCGC...ATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CAA 90 bp TACGTGGTGGATAGCGCATGTCTCCAGGAATCCAACTATGAAATGGTCTTCTCTTTTCTTCCAAAGGACTaGGAGCTCTGGACAGATTTC +
Preference number: 5 (lower is better)
Translates to: YVVDSACLQESNYEMVFSFLPKD*ELWTDF
Trigger: GAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAA...AGAGAAGACCATTTCATAGTTGGATTCCTGGAGACATGCGCTATCCACCACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CAA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCAAAAGAATGTCACGTTaGCCCGTGAAAGGGGAAGAA +
Preference number: 5 (lower is better)
Translates to: HTHTHAALMESTAAYIFIKRMSR*PVKGEE
Trigger: TTCTTCCCCTTTCACGGGCAAACGTGACATTCTTTT...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CAA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATACAAAGCTTGTTCCTaGGTGAACTCAGTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: HTHTHTHAALMESTAAYIYKACS*VNSVRR
Trigger: TCTCCTGACTGAGTTCACCAAGGAACAAGCTTTGTA...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS CCA 90 bp TCTGAAGAATCTGCTACTGATGAGGAACTGTTGGCTGAGCTCCTCTaGCATCCTCCTGATGAAGAATGTGCAATGATAAGAGAAGCTTAT +
Preference number: 5 (lower is better)
Translates to: SEESATDEELLAELL*HPPDEECAMIREAY
Trigger: ATAAGCTTCTCTTATCATTGCACATTCTTCATCAGGAGGATGCCAGAGGAGCTCAGCCAACAGTTCCTCATCAGTAGCAGATTCTTCAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CAA 90 bp ATGACATTTATTCACTCAACTGAACACACACACACATACACACACACACACACACACAAGATCGGTGGCTaGTACACGGGAAACACAACC +
Preference number: 5 (lower is better)
Translates to: MTFIHSTEHTHTYTHTHTHKIGG*YTGNTT
Trigger: GGTTGTGTTTCCCGTGTACAAGCCACCGATCTTGTG...TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAATGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CAA 90 bp CACACATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTAAATAGTTTACAAAGCTaGTTCCTTGGTGAACTCAGT +
Preference number: 5 (lower is better)
Translates to: HTYTHTHTRSTDGEYSCLNSLQS*FLGELS
Trigger: ACTGAGTTCACCAAGGAACAAGCTTTGTAAACTATT...TAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CAA 90 bp CATACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATAACAAGAAGTGTTTACTaGGGGGATGATACATGGATG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHAALMESTAAYITRSVY*GDDTWM
Trigger: CATCCATGTATCATCCCCCAAGTAAACACTTCTTGT...TATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS GCA 90 bp TACCCAAAGCAACCTGTCCTTCAAGGCTCACATCAAGAGATGCCTTaGCTTTCAATAGCTACAAAGCCTTCAGCTGAAGGAGAAATAATA +
Preference number: 5 (lower is better)
Translates to: YPKQPVLQGSHQEMP*LSIATKPSAEGEII
Trigger: TATTATTTCTCCTTCAGCTGAAGGCTTTGTAGCTATTGAAAGGCAAGGCATCTCTTGATGTGAGCCTTGAAGGACAGGTTGCTTTGGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CAA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCTCCCCGTTGTTTCTATaGTGCCTGTCATCATTCCTG +
Preference number: 5 (lower is better)
Translates to: THAALMESTAAYIFIYNSSPLFL*CLSSFL
Trigger: CAGGAATGATGACAGGCACAATAGAAACAACGGGGA...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CAA 90 bp CACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTTTAACTGTAAGTTCTaGAGGGCAGATACCAAGATT +
Preference number: 5 (lower is better)
Translates to: HTHTHAALMESTAAYIFIFNCKF*RADTKI
Trigger: AATCTTGGTATCTGCCCTCAAGAACTTACAGTTAAA...GATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CAA 90 bp ACTCACCCTAGGCCTGCCATAATGCAAAATGGAATAGAACGAAAAGGCCAAGGACTTTTCATGACAACATaGTCTCCCCATTTAACTGTA +
Preference number: 5 (lower is better)
Translates to: THPRPAIMQNGIERKGQGLFMTT*SPHLTV
Trigger: TACAGTTAAATGGGGAGACAATGTTGTCATGAAAAG...TCCTTGGCCTTTTCGTTCTATTCCATTTTGCATTATGGCAGGCCTAGGGTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CAA 90 bp ATGACATTTATTCACTCAACTGAACACACACACACATACACACACACACACACACACAGCAACTTTCCCTaGAAGGAGATCTTCTACTCG +
Preference number: 5 (lower is better)
Translates to: MTFIHSTEHTHTYTHTHTHSNFP*KEIFYS
Trigger: CGAGTAGAAGATCTCCTTCAAGGGAAAGTTGCTGTG...TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAATGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CAA 90 bp ATGACATTTATTCACTCAACTGAACACACACACACATACACACACACACACACACAGAAATGTTCCCCGTaGTTTCTATTGTGCCTGTCA +
Preference number: 5 (lower is better)
Translates to: MTFIHSTEHTHTYTHTHTQKCSP*FLLCLS
Trigger: TGACAGGCACAATAGAAACAACGGGGAACATTTCTG...TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAATGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS-3UTR CAA 90 bp ATAATTATGTTAAATAACACCCAACTCTCAGTCCAACCTCTGCCGAATATACACAGAAGATGCCTCTGGTaGCTAACCAGTCTCTGTGAA +
Preference number: 5 (lower is better)
Translates to: IIMLNNTQLSVQPLPNIHRRCLW*LTSLCE
Trigger: TTCACAGAGACTGGTTAGCAACCAGAGGCATCTTCT...GTGTATATTCGGCAGAGGTTGGACTGAGAGTTGGGTGTTATTTAACATAATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CAA 90 bp TACACACACACACACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCTTTTCATGACAACATaGTCTCCCCATTTAACTGTA +
Preference number: 5 (lower is better)
Translates to: YTHTHTRSTDGEYSCLYILFMTT*SPHLTV
Trigger: TACAGTTAAATGGGGAGACAATGTTGTCATGAAAAG...AATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGTGTGTGTGTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CAA 90 bp ATGACATTTATTCACTCAACTGAACACACACACACATACACACACACACACACATTTCTTCCAAAGGACTaGGAGCTCTGGACAGATTTC +
Preference number: 5 (lower is better)
Translates to: MTFIHSTEHTHTYTHTHTFLPKD*ELWTDF
Trigger: GAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAA...TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAATGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CAA 90 bp ATGACATTTATTCACTCAACTGAACACACACACACATACACACACACACACACAGATGGGACAAAGGTCTaGGACAAACACAGCAACTTT +
Preference number: 5 (lower is better)
Translates to: MTFIHSTEHTHTYTHTHTDGTKV*DKHSNF
Trigger: AAAGTTGCTGTGTTTGTCCAAGACCTTTGTCCCATC...TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAATGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CAA 90 bp CTAATCTTTCTTCCAAAGGACTTGGAGCTCTGGACAGATTTCAGTTCATTCTTCTTCTCTTTCAGTTCCTaGGCCCATGAAAGAAAATCA +
Preference number: 5 (lower is better)
Translates to: LIFLPKDLELWTDFSSFFFSFSS*AHERKS
Trigger: TGATTTTCTTTCATGGGCCAAGGAACTGAAAGAGAA...GAAGAATGAACTGAAATCTGTCCAGAGCTCCAAGTCCTTTGGAAGAAAGATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383671.8
ENST00000486257.5
CDS-3UTR CAA 90 bp ACACACGCAGCACTGATGGAGAGTACAGCTGCTTATATATTCATCTATAATAGCACATCAAGAGATGCCTaGCCTTTCAATAGCTACAAA +
Preference number: 5 (lower is better)
Translates to: THAALMESTAAYIFIYNSTSRDA*PFNSYK
Trigger: TTTGTAGCTATTGAAAGGCAAGGCATCTCTTGATGT...GCTATTATAGATGAATATATAAGCAGCTGTACTCTCCATCAGTGCTGCGTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS TCA 90 bp ACATGGATGGGACAAAGGTCTTGGACAAACACAGCAACTTTCCCTTaGAGGAGATCTTCTACTCGAATCTTATTTCTTTTGTCTTGTTTA +
Preference number: 5 (lower is better)
Translates to: TWMGQRSWTNTATFP*RRSSTRILFLLSCL
Trigger: TAAACAAGACAAAAGAAATAAGATTCGAGTAGAAGATCTCCTTCAAGGGAAAGTTGCTGTGTTTGTCCAAGACCTTTGTCCCATCCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS CCA 90 bp AATTCTCTAGTGTTTGGTGAAGTGTTCAGCACAGTGCCTGGAAGATaGCAGGAGTTCAATACATCAACAGTAGTATTGATAACAATATTA +
Preference number: 5 (lower is better)
Translates to: NSLVFGEVFSTVPGR*QEFNTSTVVLITIL
Trigger: TAATATTGTTATCAATACTACTGTTGATGTATTGAACTCCTGCCATCTTCCAGGCACTGTGCTGAACACTTCACCAAACACTAGAGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS-3UTR CAA 90 bp ATGACATTTATTCACTCAACTGAACACACACACACATACACACACACACACACAGAGGTACACTCGTCTTaGGATTATAGTCAATCTATT +
Preference number: 5 (lower is better)
Translates to: MTFIHSTEHTHTYTHTHTEVHSS*DYSQSI
Trigger: AATAGATTGACTATAATCCAAAGACGAGTGTACCTC...TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTTCAGTTGAGTGAATAAATGTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS CAA 72 bp GCCCTGCGCCCTGTGAAAGTCCCGGGCCAGCCGCACTaGAGTCCACAGCCTCCAACCACAAGCACGGTCCTG +
Preference number: 6 (lower is better)
Translates to: ALRPVKVPGQPH*SPQPPTTSTVL
Trigger: CAGGACCGTGCTTGTGGTTGGAGGCTGTGGACTCAAGTGCGGCTGGCCCGGGACTTTCACAGGGCGCAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS GCA 72 bp GCCCCTGGGCCCAGATCAGGAGGAGACACCAGCGCATaGTTCTGCCCAGAGGGCCTACAGGAAGCAGATGTG +
Preference number: 6 (lower is better)
Translates to: APGPRSGGDTSA*FCPEGLQEADV
Trigger: CACATCTGCTTCCTGTAGGCCCTCTGGGCAGAAGCATGCGCTGGTGTCTCCTCCTGATCTGGGCCCAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481065.5
ENST00000486257.5
CDS GCA 72 bp ATTGTGCCTGTCATCATTCCTGAGGCGAGGGGAGCCTaGCTCAGCCCCTGGGCCCAGATCAGGAGGAGACAC +
Preference number: 6 (lower is better)
Translates to: IVPVIIPEARGA*LSPWAQIRRRH
Trigger: GTGTCTCCTCCTGATCTGGGCCCAGGGGCTGAGGCAGGCTCCCCTCGCCTCAGGAATGATGACAGGCACAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000485814.1
ENST00000486257.5
CDS CCA 72 bp AAAACCTGTGGCCCGCAGCCCTCAGCCAAGCGGGGCTaGGAGTGGTGGTACCTTCCACAAGATCGGTGGCTT +
Preference number: 6 (lower is better)
Translates to: KTCGPQPSAKRG*EWWYLPQDRWL
Trigger: AAGCCACCGATCTTGTGGAAGGTACCACCACTCCCAGCCCCGCTTGGCTGAGGGCTGCGGGCCACAGGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS CCA 72 bp TGTTTCCCAAACTCACTAAGGCCGGGGAGCCAGGAGTaGCAGGGCCAAGAGCAGCTAGTGGGACTAGAGCAC +
Preference number: 6 (lower is better)
Translates to: CFPNSLRPGSQE*QGQEQLVGLEH
Trigger: GTGCTCTAGTCCCACTAGCTGCTCTTGGCCCTGCCACTCCTGGCTCCCCGGCCTTAGTGAGTTTGGGAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS CCA 72 bp CAGGCCGGGACCTGGGGCCACTCGATCCTTGAAGGATaGGGAGATGTGCCACCCCAAGTCAGCATTACAAAT +
Preference number: 6 (lower is better)
Translates to: QAGTWGHSILEG*GDVPPQVSITN
Trigger: ATTTGTAATGCTGACTTGGGGTGGCACATCTCCCCATCCTTCAAGGATCGAGTGGCCCCAGGTCCCGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383671.8
ENST00000461158.5
ENST00000481065.5
ENST00000484319.1
ENST00000485814.1
ENST00000486257.5
CDS CCA 72 bp TCGCGGCCATGGCTCCAAGCAATGGAATCTGGAACCTaGCACCGTGCTCAGCCACTGAGCTTTCTAGGACCT +
Preference number: 6 (lower is better)
Translates to: SRPWLQAMESGT*HRAQPLSFLGP
Trigger: AGGTCCTAGAAAGCTCAGTGGCTGAGCACGGTGCCAGGTTCCAGATTCCATTGCTTGGAGCCATGGCCGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383671.8
ENST00000461158.5
ENST00000481065.5
ENST00000484319.1
ENST00000486257.5
CDS CCA 72 bp CGGGGCTGGGAGTGGTGGTACCTTCCACAAGATCGGTaGCTTGTACACGGGAAACACAACCTAGGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: RGWEWWYLPQDR*LVHGKHNLGFS
Trigger: GGAGAACCCTAGGTTGTGTTTCCCGTGTACAAGCCACCGATCTTGTGGAAGGTACCACCACTCCCAGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS CAA 72 bp TTACAAATGGCCAGAAGCTGGTCCTGCTGCTCCCAGTaGACCTGGGTCACTTGTGCCGTGGTGGAGGAGAGG +
Preference number: 6 (lower is better)
Translates to: LQMARSWSCCSQ*TWVTCAVVEER
Trigger: CCTCTCCTCCACCACGGCACAAGTGACCCAGGTCAACTGGGAGCAGCAGGACCAGCTTCTGGCCATTTGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383671.8
ENST00000461158.5
ENST00000481065.5
ENST00000484319.1
ENST00000485814.1
ENST00000486257.5
CDS GCA 72 bp CCCAAGTCAGCATTACAAATGGCCAGAAGCTGGTCCTaGTGCTCCCAGTTGACCTGGGTCACTTGTGCCGTG +
Preference number: 6 (lower is better)
Translates to: PKSALQMARSWS*CSQLTWVTCAV
Trigger: CACGGCACAAGTGACCCAGGTCAACTGGGAGCAGCAGGACCAGCTTCTGGCCATTTGTAATGCTGACTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383671.8
ENST00000461158.5
ENST00000481065.5
ENST00000484319.1
ENST00000485814.1
ENST00000486257.5
CDS GCA 72 bp TTTCTTCTTTCTAGTCAACGCGACCACCACGATGACTaGTGTGCAGATGACCACCAGCGTCGCGGCCATGGC +
Preference number: 6 (lower is better)
Translates to: FLLSSQRDHHDD*CADDHQRRGHG
Trigger: GCCATGGCCGCGACGCTGGTGGTCATCTGCACAGCAGTCATCGTGGTGGTCGCGTTGACTAGAAAGAAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383671.8
ENST00000461158.5
ENST00000481065.5
ENST00000484319.1
ENST00000486257.5
CDS GCA 72 bp AAGTCAGCATTACAAATGGCCAGAAGCTGGTCCTGCTaGTCCCAGTTGACCTGGGTCACTTGTGCCGTGGTG +
Preference number: 6 (lower is better)
Translates to: KSALQMARSWSC*SQLTWVTCAVV
Trigger: CACCACGGCACAAGTGACCCAGGTCAACTGGGAGCAGCAGGACCAGCTTCTGGCCATTTGTAATGCTGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383671.8
ENST00000461158.5
ENST00000481065.5
ENST00000484319.1
ENST00000485814.1
ENST00000486257.5
CDS GCA 72 bp ATTCCTCAGATGGAAATGCAGAAATCACCCGTCTTCTaGGTCGCTCAGGCTGGGAGCTGTAGACCGGAGCTG +
Preference number: 6 (lower is better)
Translates to: IPQMEMQKSPVF*VAQAGSCRPEL
Trigger: CAGCTCCGGTCTACAGCTCCCAGCCTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461158.5
CDS GCA 72 bp TCCCAGTGTACGTCCCATCAGGGTAGGTGTGATAGATaGAGAAGTACTCCCCTGTATCGTTCACGGTCAGCG +
Preference number: 6 (lower is better)
Translates to: SQCTSHQGRCDR*RSTPLYRSRSA
Trigger: CGCTGACCGTGAACGATACAGGGGAGTACTTCTGCATCTATCACACCTACCCTGATGGGACGTACACTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383671.8
ENST00000461158.5
ENST00000481065.5
ENST00000484319.1
ENST00000485814.1
ENST00000486257.5
CDS GCA 72 bp AGGAGGATAGCATGTTTCTGCAGGAAAGTGACCACTTaGCAGCTAGACCCTGAGGCTGCCTTGGAGGAAAGC +
Preference number: 6 (lower is better)
Translates to: RRIACFCRKVTT*QLDPEAALEES
Trigger: GCTTTCCTCCAAGGCAGCCTCAGGGTCTAGCTGGCAAGTGGTCACTTTCCTGCAGAAACATGCTATCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS CCA 72 bp TGTCTTTGGGCTTCTGCTTCTCCAAAGTCTTCCCTCTaGCTCAGAAGTGGTAGGGGAGCTCCATGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: CLWASASPKSSL*LRSGRGAPWLS
Trigger: TGACAGCCATGGAGCTCCCCTACCACTTCTGAGCCAGAGGGAAGACTTTGGAGAAGCAGAAGCCCAAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481065.5
ENST00000486257.5
CDS TCA 72 bp GCCAGTCAGCAGCCCTCGTGGCATAGCAGGGATCTGTaGGGTCCATCAGGTGCTGACTCACATTTCTATTTT +
Preference number: 6 (lower is better)
Translates to: ASQQPSWHSRDL*GPSGADSHFYF
Trigger: AAAATAGAAATGTGAGTCAGCACCTGATGGACCTCACAGATCCCTGCTATGCCACGAGGGCTGCTGACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS GCA 72 bp CTTTCTCTGCAGAAATGTTCCCCGTTGTTTCTATTGTaGCTGTCATCATTCCTGAGGCGAGGGGAGCCTGCC +
Preference number: 6 (lower is better)
Translates to: LSLQKCSPLFLL*LSSFLRRGEPA
Trigger: GGCAGGCTCCCCTCGCCTCAGGAATGATGACAGGCACAATAGAAACAACGGGGAACATTTCTGCAGAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000485814.1
ENST00000486257.5
CDS GCA 72 bp CTGCCTCGCAGGCTCTCAACACAGTTGCCTTGGGGATaGTCCATGTTGTACATCCTGAAAATCTGCATCTGC +
Preference number: 6 (lower is better)
Translates to: LPRRLSTQLPWG*SMLYILKICIC
Trigger: GCAGATGCAGATTTTCAGGATGTACAACATGGAGCATCCCCAAGGCAACTGTGTTGAGAGCCTGCGAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS CCA 72 bp TCTGCCACTGAAAGTAGCCGACTTCCACAAGATCGGTaGCTTGTACACGGGAAACACAACCTAGGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: SATESSRLPQDR*LVHGKHNLGFS
Trigger: GGAGAACCCTAGGTTGTGTTTCCCGTGTACAAGCCACCGATCTTGTGGAAGTCGGCTACTTTCAGTGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486257.5
CDS CAA 90 bp GAAGATCCACATTCACCTGCCTCGCAGGCTCTCAACACAGTTGCCTaGGGGATGCTCCATGTTGTACATCCTGAAAATCTGCATCTGCAC +
Preference number: 6 (lower is better)
Translates to: EDPHSPASQALNTVA*GMLHVVHPENLHLH
Trigger: GTGCAGATGCAGATTTTCAGGATGTACAACATGGAGCATCCCCAAGGCAACTGTGTTGAGAGCCTGCGAGGCAGGTGAATGTGGATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS TCA 72 bp AGTTGGACAAGTCTGGTCCGCCTTGATGCAGCTGGGTaGGTACAGGTGCTGAAAAAGAATGTCACGTTTGCC +
Preference number: 6 (lower is better)
Translates to: SWTSLVRLDAAG*VQVLKKNVTFA
Trigger: GGCAAACGTGACATTCTTTTTCAGCACCTGTACTCACCCAGCTGCATCAAGGCGGACCAGACTTGTCCAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS TCA 72 bp TTAGAGGAGAGAGCTTTCCTGTGCACAATGACCTCATaGGAGCTGGAAATGCAAAGAAGGGTGAGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: LEERAFLCTMTS*ELEMQRRVSPW
Trigger: CCAGGGGCTCACCCTTCTTTGCATTTCCAGCTCTCATGAGGTCATTGTGCACAGGAAAGCTCTCTCCTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS GCA 72 bp ACTCCAAGGCCAGGGTTCCACCCAACCTCTTCATTCTaGCCTCCTTATCTGATAGAACAGGAGGATAGCATG +
Preference number: 6 (lower is better)
Translates to: TPRPGFHPTSSF*PPYLIEQEDSM
Trigger: CATGCTATCCTCCTGTTCTATCAGATAAGGAGGGCAGAATGAAGAGGTTGGGTGGAACCCTGGCCTTGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS CCA 72 bp ATTCACCTGCCTCGCAGGCTCTCAACACAGTTGCCTTaGGGATGCTCCATGTTGTACATCCTGAAAATCTGC +
Preference number: 6 (lower is better)
Translates to: IHLPRRLSTQLP*GCSMLYILKIC
Trigger: GCAGATTTTCAGGATGTACAACATGGAGCATCCCCAAGGCAACTGTGTTGAGAGCCTGCGAGGCAGGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS CAA 72 bp CACCTTTCTCTGCAGAAATGTTCCCCGTTGTTTCTATaGTGCCTGTCATCATTCCTGAGGCGAGGGGAGCCT +
Preference number: 6 (lower is better)
Translates to: HLSLQKCSPLFL*CLSSFLRRGEP
Trigger: AGGCTCCCCTCGCCTCAGGAATGATGACAGGCACAATAGAAACAACGGGGAACATTTCTGCAGAGAAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000485814.1
ENST00000486257.5
CDS CAA 72 bp CATTCACCTGCCTCGCAGGCTCTCAACACAGTTGCCTaGGGGATGCTCCATGTTGTACATCCTGAAAATCTG +
Preference number: 6 (lower is better)
Translates to: HSPASQALNTVA*GMLHVVHPENL
Trigger: CAGATTTTCAGGATGTACAACATGGAGCATCCCCAAGGCAACTGTGTTGAGAGCCTGCGAGGCAGGTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS CAA 72 bp ATCCACATTCACCTGCCTCGCAGGCTCTCAACACAGTaGCCTTGGGGATGCTCCATGTTGTACATCCTGAAA +
Preference number: 6 (lower is better)
Translates to: IHIHLPRRLSTQ*PWGCSMLYILK
Trigger: TTTCAGGATGTACAACATGGAGCATCCCCAAGGCAACTGTGTTGAGAGCCTGCGAGGCAGGTGAATGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS CAA 72 bp AGGCTCTCAACACAGTTGCCTTGGGGATGCTCCATGTaGTACATCCTGAAAATCTGCATCTGCACCCAGAAG +
Preference number: 6 (lower is better)
Translates to: RLSTQLPWGCSM*YILKICICTQK
Trigger: CTTCTGGGTGCAGATGCAGATTTTCAGGATGTACAACATGGAGCATCCCCAAGGCAACTGTGTTGAGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS TCA 72 bp TTCCAGAAGATGCCTCTGGTTGCTAACCAGTCTCTGTaGAGAAGCTGCAGTTACCCAGGCTTCTGTAACTCA +
Preference number: 6 (lower is better)
Translates to: FQKMPLVANQSL*RSCSYPGFCNS
Trigger: TGAGTTACAGAAGCCTGGGTAACTGCAGCTTCTTCACAGAGACTGGTTAGCAACCAGAGGCATCTTCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383671.8
ENST00000481065.5
ENST00000486257.5
CDS CCA 72 bp CCAGCTGATTTTCTCCTGAGGTCACCTTCCACAGAATaGATTCTGAGGGCTTTCTTCTTTCTAGTCAACGCG +
Preference number: 6 (lower is better)
Translates to: PADFLLRSPSTE*ILRAFFFLVNA
Trigger: CGCGTTGACTAGAAAGAAGAAAGCCCTCAGAATCCATTCTGTGGAAGGTGACCTCAGGAGAAAATCAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383671.8
ENST00000461158.5
ENST00000481065.5
ENST00000486257.5
CDS CAA 90 bp TGTAGTGCCCAAGATTCTGAAGAATCTGCTACTGATGAGGAACTGTaGGCTGAGCTCCTCTGGCATCCTCCTGATGAAGAATGTGCAATG +
Preference number: 6 (lower is better)
Translates to: CSAQDSEESATDEEL*AELLWHPPDEECAM
Trigger: CATTGCACATTCTTCATCAGGAGGATGCCAGAGGAGCTCAGCCAACAGTTCCTCATCAGTAGCAGATTCTTCAGAATCTTGGGCACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS GCA 72 bp CAACCTGTCCTTCAAGGCTCACATCAAGAGATGCCTTaGCTTTCAATAGCTACAAAGCCTTCAGCTGAAGGA +
Preference number: 6 (lower is better)
Translates to: QPVLQGSHQEMP*LSIATKPSAEG
Trigger: TCCTTCAGCTGAAGGCTTTGTAGCTATTGAAAGGCAAGGCATCTCTTGATGTGAGCCTTGAAGGACAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS GCA 72 bp CGAATTGAGAAGCCCTGCTGTGCAGTGTTTCAGGATTaGATTTTCTATGCTAGAGGGAGAGGTTTATCCACC +
Preference number: 6 (lower is better)
Translates to: RIEKPCCAVFQD*IFYARGRGLST
Trigger: GGTGGATAAACCTCTCCCTCTAGCATAGAAAATGCAATCCTGAAACACTGCACAGCAGGGCTTCTCAATTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485814.1
CDS CCA 72 bp TCTGCTACTGATGAGGAACTGTTGGCTGAGCTCCTCTaGCATCCTCCTGATGAAGAATGTGCAATGATAAGA +
Preference number: 6 (lower is better)
Translates to: SATDEELLAELL*HPPDEECAMIR
Trigger: TCTTATCATTGCACATTCTTCATCAGGAGGATGCCAGAGGAGCTCAGCCAACAGTTCCTCATCAGTAGCAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS CAA 72 bp CACCTTTCTCTGCAGAAATGTTCCCCGTTGTTTCTATaGTGCCTGTCATCATTCAACTTAGCACGTTGCCCC +
Preference number: 6 (lower is better)
Translates to: HLSLQKCSPLFL*CLSSFNLARCP
Trigger: GGGGCAACGTGCTAAGTTGAATGATGACAGGCACAATAGAAACAACGGGGAACATTTCTGCAGAGAAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484319.1
CDS CCA 72 bp AAGATTCTGAAGAATCTGCTACTGATGAGGAACTGTTaGCTGAGCTCCTCTGGCATCCTCCTGATGAAGAAT +
Preference number: 6 (lower is better)
Translates to: KILKNLLLMRNC*LSSSGILLMKN
Trigger: ATTCTTCATCAGGAGGATGCCAGAGGAGCTCAGCCAACAGTTCCTCATCAGTAGCAGATTCTTCAGAATCTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS CCA 72 bp CCAGCTGATTTTCTCCTGAGGTCACCTTCCACAGAATaGATTCTGAGGGCTTTCTTCTTGTTACTTCCTGTT +
Preference number: 6 (lower is better)
Translates to: PADFLLRSPSTE*ILRAFFLLLPV
Trigger: AACAGGAAGTAACAAGAAGAAAGCCCTCAGAATCCATTCTGTGGAAGGTGACCTCAGGAGAAAATCAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496848.1
CDS CAA 72 bp GGGATGATTAACAGACTGGGTCCAAAGTCATCCTGTTaGGTGACCTTGGAAAACTTTCTCAACCTCCTGAAG +
Preference number: 6 (lower is better)
Translates to: GMINRLGPKSSC*VTLENFLNLLK
Trigger: CTTCAGGAGGTTGAGAAAGTTTTCCAAGGTCACCAAACAGGATGACTTTGGACCCAGTCTGTTAATCATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS TCA 72 bp AAAATCTCCTCAGGTGATTCAAATGTGATCCCGAATTaGGAAGCCCTGCTGTGCAGTGTTTCAGGATTGCAT +
Preference number: 6 (lower is better)
Translates to: KISSGDSNVIPN*EALLCSVSGLH
Trigger: ATGCAATCCTGAAACACTGCACAGCAGGGCTTCTCAATTCGGGATCACATTTGAATCACCTGAGGAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485814.1
CDS GCA 72 bp CTTTCTCTGCAGAAATGTTCCCCGTTGTTTCTATTGTaGCTGTCATCATTCCTCAGATGGAAATGCAGAAAT +
Preference number: 6 (lower is better)
Translates to: LSLQKCSPLFLL*LSSFLRWKCRN
Trigger: ATTTCTGCATTTCCATCTGAGGAATGATGACAGGCACAATAGAAACAACGGGGAACATTTCTGCAGAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461158.5
CDS TCA 72 bp GGACAAAGGTCTTGGACAAACACAGCAACTTTCCCTTaGAGGAGATCTTCTACTCGAATCTTATTTCTTTTG +
Preference number: 6 (lower is better)
Translates to: GQRSWTNTATFP*RRSSTRILFLL
Trigger: CAAAAGAAATAAGATTCGAGTAGAAGATCTCCTTCAAGGGAAAGTTGCTGTGTTTGTCCAAGACCTTTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS CAA 72 bp GGGACAAAGGTCTTGGACAAACACAGCAACTTTCCCTaGAAGGAGATCTTCTACTCGAATCTTATTTCTTTT +
Preference number: 6 (lower is better)
Translates to: GTKVLDKHSNFP*KEIFYSNLISF
Trigger: AAAAGAAATAAGATTCGAGTAGAAGATCTCCTTCAAGGGAAAGTTGCTGTGTTTGTCCAAGACCTTTGTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS CAA 90 bp TACATGGATGGGACAAAGGTCTTGGACAAACACAGCAACTTTCCCTaGAAGGAGATCTTCTACTCGAATCTTATTTCTTTTGTCTTGTTT +
Preference number: 6 (lower is better)
Translates to: YMDGTKVLDKHSNFP*KEIFYSNLISFVLF
Trigger: AAACAAGACAAAAGAAATAAGATTCGAGTAGAAGATCTCCTTCAAGGGAAAGTTGCTGTGTTTGTCCAAGACCTTTGTCCCATCCATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS TCA 72 bp GCATATAGGAATAAGAGTACCTCTTTCATAGGGTTGTaGGGATTTAATTCTCTAGTGTTTGGTGAAGTGTTC +
Preference number: 6 (lower is better)
Translates to: AYRNKSTSFIGL*GFNSLVFGEVF
Trigger: GAACACTTCACCAAACACTAGAGAATTAAATCCTCACAACCCTATGAAAGAGGTACTCTTATTCCTATATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS TCA 72 bp CATAAAGTTGTCAACAAATACACAAACTGCATAGGGTaGGCCACAAGAAAGGCCATGAAGGAAACATTTAAA +
Preference number: 6 (lower is better)
Translates to: HKVVNKYTNCIG*ATRKAMKETFK
Trigger: TTTAAATGTTTCCTTCATGGCCTTTCTTGTGGCTCACCCTATGCAGTTTGTGTATTTGTTGACAACTTTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481065.5
CDS CAA 90 bp ACAGTGCCTGGAAGATGGCAGGAGTTCAATACATCAACAGTAGTATaGATAACAATATTAATTAAGGAAGTGAAAGGAAAATTGGAGGAC +
Preference number: 6 (lower is better)
Translates to: TVPGRWQEFNTSTVV*ITILIKEVKGKLED
Trigger: GTCCTCCAATTTTCCTTTCACTTCCTTAATTAATATTGTTATCAATACTACTGTTGATGTATTGAACTCCTGCCATCTTCCAGGCACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481065.5