RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for THRA (Homo sapiens)

Ensembl gene IDs: ENSG00000126351

Ensembl transcript IDs: ENST00000264637.8, ENST00000394121.8, ENST00000450525.7, ENST00000546243.5, ENST00000577288.5, ENST00000577486.1, ENST00000577637.1, ENST00000578218.5, ENST00000584985.5, ENST00000585047.5

Found 635 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACAGCGCGGGCAGCCCGAGGCCCCAGCAGGGTGGGACAGGCACATaGACAGGTGACAGCGGGTGCTCCTCCAGGCCCTCCACCCCTGTT +
Preference number: 1 (lower is better)
Translates to: DSAGSPRPQQGGTGT*TGDSGCSSRPSTPV
Trigger: AACAGGGGTGGAGGGCCTGGAGGAGCACCCGCTGTCACCTGTGCATGTGCCTGTCCCACCCTGCTGGGGCCTCGGGCTGCCCGCGCTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR GCA 90 bp GTGGGCGGCAGCCACAGGGAGGGGGAGGAGGACAGCTCACCCAAGTaGAGACCAACAGAGCACCCTCACCAGGAGGGCGAGAGGGGCTCA +
Preference number: 1 (lower is better)
Translates to: VGGSHREGEEDSSPK*RPTEHPHQEGERGS
Trigger: TGAGCCCCTCTCGCCCTCCTGGTGAGGGTGCTCTGTTGGTCTGCACTTGGGTGAGCTGTCCTCCTCCCCCTCCCTGTGGCTGCCGCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR GCA 90 bp CAACCCGTCCTCCCACCGATACTGCACCTGCTGCTCCACCCTGCCTaGCCTAGTGCCCCGGGCCAATACTGGGGGAGGCATGCTGAGCAC +
Preference number: 1 (lower is better)
Translates to: QPVLPPILHLLLHPA*PSAPGQYWGRHAEH
Trigger: GTGCTCAGCATGCCTCCCCCAGTATTGGCCCGGGGCACTAGGGCAGGCAGGGTGGAGCAGCAGGTGCAGTATCGGTGGGAGGACGGGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR GCA 90 bp TGGCCCCCTCGTCCTATTCCCAGCAACCCGTCCTCCCACCGATACTaGACCTGCTGCTCCACCCTGCCTGCCCTAGTGCCCCGGGCCAAT +
Preference number: 1 (lower is better)
Translates to: WPPRPIPSNPSSHRY*TCCSTLPALVPRAN
Trigger: ATTGGCCCGGGGCACTAGGGCAGGCAGGGTGGAGCAGCAGGTGCAGTATCGGTGGGAGGACGGGTTGCTGGGAATAGGACGAGGGGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR GCA 90 bp AGGCCCCAGCAGGGTGGGACAGGCACATGCACAGGTGACAGCGGGTaGTCCTCCAGGCCCTCCACCCCTGTTGGAACACCTGAACGATTG +
Preference number: 1 (lower is better)
Translates to: RPQQGGTGTCTGDSG*SSRPSTPVGTPERL
Trigger: CAATCGTTCAGGTGTTCCAACAGGGGTGGAGGGCCTGGAGGAGCACCCGCTGTCACCTGTGCATGTGCCTGTCCCACCCTGCTGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR TCA 90 bp AGGAAGGGAAGGTGGTCTTACGGGATGGGAGGTGACCAGCCCTGCTaGGCCCACGCTCCCAGCTTTCAGGCACCTCCTGCTCTTGGGGCA +
Preference number: 1 (lower is better)
Translates to: RKGRWSYGMGGDQPC*AHAPSFQAPPALGA
Trigger: TGCCCCAAGAGCAGGAGGTGCCTGAAAGCTGGGAGCGTGGGCTCAGCAGGGCTGGTCACCTCCCATCCCGTAAGACCACCTTCCCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
3UTR TCA 90 bp AGGGACTGGGACAGCTGCCGCTCTAGAGCAGGTGCGTGGCACTCCTaGGTCGCCCTGGCTCCTCCCCTACCATGTGTACTCACTCACACA +
Preference number: 1 (lower is better)
Translates to: RDWDSCRSRAGAWHS*VALAPPLPCVLTHT
Trigger: TGTGTGAGTGAGTACACATGGTAGGGGAGGAGCCAGGGCGACTCAGGAGTGCCACGCACCTGCTCTAGAGCGGCAGCTGTCCCAGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR CCA 90 bp CACGCTCCCAGCTTTCAGGCACCTCCTGCTCTTGGGGCAGAGGCCTaGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTG +
Preference number: 1 (lower is better)
Translates to: HAPSFQAPPALGAEA*EKVWHSFSFPIGLL
Trigger: CAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGCCCCAAGAGCAGGAGGTGCCTGAAAGCTGGGAGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
3UTR CCA 90 bp GCCCAGAAGACAGATGGGAAACAGGGAAACAGAGTGCTAAAGGGGTaGAGGGTTCTGGGAGACGCTCACGCACAGCCCTCCTACCCCCGA +
Preference number: 1 (lower is better)
Translates to: AQKTDGKQGNRVLKG*RVLGDAHAQPSYPR
Trigger: TCGGGGGTAGGAGGGCTGTGCGTGAGCGTCTCCCAGAACCCTCCACCCCTTTAGCACTCTGTTTCCCTGTTTCCCATCTGTCTTCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR CCA 90 bp ACAGCTGCCGCTCTAGAGCAGGTGCGTGGCACTCCTGAGTCGCCCTaGCTCCTCCCCTACCATGTGTACTCACTCACACATTCACGCAGA +
Preference number: 1 (lower is better)
Translates to: TAAALEQVRGTPESP*LLPYHVYSLTHSRR
Trigger: TCTGCGTGAATGTGTGAGTGAGTACACATGGTAGGGGAGGAGCCAGGGCGACTCAGGAGTGCCACGCACCTGCTCTAGAGCGGCAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR CCA 90 bp GACCCTGTTGTGTTAACTCACAGCTCTGATCGGCAGCCCTACCCTTaGGGCTCTGGTGTGGGGGCATTTCTCTCTGATGTGGGGGAAGAA +
Preference number: 1 (lower is better)
Translates to: DPVVLTHSSDRQPYP*GSGVGAFLSDVGEE
Trigger: TTCTTCCCCCACATCAGAGAGAAATGCCCCCACACCAGAGCCCCAAGGGTAGGGCTGCCGATCAGAGCTGTGAGTTAACACAACAGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR CCA 90 bp ACTGGGCCCCCAGGCGTGGTAGGAAGGTACAAGAGGGCCTACCCATaGGACTGGAGTAATACAGGATTCAGTACTCCAGGAGAGAGAGAG +
Preference number: 1 (lower is better)
Translates to: TGPPGVVGRYKRAYP*DWSNTGFSTPGERE
Trigger: CTCTCTCTCTCCTGGAGTACTGAATCCTGTATTACTCCAGTCCCATGGGTAGGCCCTCTTGTACCTTCCTACCACGCCTGGGGGCCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR TCA 90 bp AACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTaGGGAAGGGAAGGTGGTCTTACGGGATGGGAGGTGACCAGCCCT +
Preference number: 1 (lower is better)
Translates to: NYTAKSKGVWPCLAC*GREGGLTGWEVTSP
Trigger: AGGGCTGGTCACCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
3UTR CCA 90 bp CCCCCAGGCGTGGTAGGAAGGTACAAGAGGGCCTACCCATGGGACTaGAGTAATACAGGATTCAGTACTCCAGGAGAGAGAGAGAGGATA +
Preference number: 1 (lower is better)
Translates to: PPGVVGRYKRAYPWD*SNTGFSTPGERERI
Trigger: TATCCTCTCTCTCTCTCCTGGAGTACTGAATCCTGTATTACTCCAGTCCCATGGGTAGGCCCTCTTGTACCTTCCTACCACGCCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CCA 90 bp GCAGGGACTGGGACAGCTGCCGCTCTAGAGCAGGTGCGTGGCACTCCTGAGTCGAGGGGTGGAGGGTTCTaGGAGACGCTCACGCACAGC +
Preference number: 2 (lower is better)
Translates to: AGTGTAAALEQVRGTPESRGGGF*ETLTHS
Trigger: GCTGTGCGTGAGCGTCTCCCAGAACCCTCCACCCCT...CGACTCAGGAGTGCCACGCACCTGCTCTAGAGCGGCAGCTGTCCCAGTCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR GCA 90 bp ACCCACATCAAGGCCATCCCCCTCATTAGCACCAATGGCCCCCAGGAGAGGGCCTCCCACCCCACCTCCTaGTCCCATGGGAGGACCACC +
Preference number: 2 (lower is better)
Translates to: THIKAIPLISTNGPQERASHPTS*SHGRTT
Trigger: GGTGGTCCTCCCATGGGAGCAGGAGGTGGGGTGGGA...GGCCCTCTCCTGGGGGCCATTGGTGCTAATGAGGGGGATGGCCTTGATGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CCA 90 bp GGAGGGTTCTGGGAGACGCTCACGCACAGCCCTCCTACCCCCGACCCAACCAATGAGAGGCCCTCAGCCTaGAGGGGAGACCTAGGCCAA +
Preference number: 2 (lower is better)
Translates to: GGFWETLTHSPPTPDPTNERPSA*RGDLGQ
Trigger: TTGGCCTAGGTCTCCCCTCCAGGCTGAGGGCCTCTC...ATTGGTTGGGTCGGGGGTAGGAGGGCTGTGCGTGAGCGTCTCCCAGAACCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CCA 90 bp GCAGGGACTGGGACAGCTGCCGCTCTAGAGCAGGTGCGTGGCACTCCTGAGTCGAGGGTCAGGGTGGGGTaGCAGGTTCCCCACTGCTTA +
Preference number: 2 (lower is better)
Translates to: AGTGTAAALEQVRGTPESRVRVG*QVPHCL
Trigger: TAAGCAGTGGGGAACCTGCCACCCCACCCTGACCCT...CGACTCAGGAGTGCCACGCACCTGCTCTAGAGCGGCAGCTGTCCCAGTCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR TCA 90 bp AGACAGCAGACAGGTCAGGAATTCCACTGGGCCCCCAGGCGTGGTAGGAAGGTATCTCCCTCTCTCCCCTaGGGAGTGGGCGGCAGCCAC +
Preference number: 2 (lower is better)
Translates to: RQQTGQEFHWAPRRGRKVSPSLP*GVGGSH
Trigger: GTGGCTGCCGCCCACTCCTCAGGGGAGAGAGGGAGA...TACCTTCCTACCACGCCTGGGGGCCCAGTGGAATTCCTGACCTGTCTGCTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR TCA 90 bp ACCCACATCAAGGCCATCCCCCTCATTAGCACCAATGGCCCCCAGGAGAGGGCCAGGCACATGCACAGGTaGCAGCGGGTGCTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: THIKAIPLISTNGPQERARHMHR*QRVLLQ
Trigger: CTGGAGGAGCACCCGCTGTCACCTGTGCATGTGCCT...GGCCCTCTCCTGGGGGCCATTGGTGCTAATGAGGGGGATGGCCTTGATGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CCA 90 bp ACCCACATCAAGGCCATCCCCCTCATTAGCACCAATGGCCCCCAGGAGAGGGCCGGTCAGGAATTCCACTaGGCCCCCAGGCGTGGTAGG +
Preference number: 2 (lower is better)
Translates to: THIKAIPLISTNGPQERAGQEFH*APRRGR
Trigger: CCTACCACGCCTGGGGGCCCAGTGGAATTCCTGACC...GGCCCTCTCCTGGGGGCCATTGGTGCTAATGAGGGGGATGGCCTTGATGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR TCA 90 bp GCAGGGACTGGGACAGCTGCCGCTCTAGAGCAGGTGCGTGGCACTCCTGAGTCGCCCTGTTGGAACACCTaGACGATTGGGGAAGGACAG +
Preference number: 2 (lower is better)
Translates to: AGTGTAAALEQVRGTPESPCWNT*TIGEGQ
Trigger: CTGTCCTTCCCCAATCGTTCAGGTGTTCCAACAGGG...CGACTCAGGAGTGCCACGCACCTGCTCTAGAGCGGCAGCTGTCCCAGTCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CCA 90 bp AGCACCCTCACCAGGAGGGCGAGAGGGGCTCAAGCCAAAGTCCCTGAATTAGAGGCCCTGTCCCAGGGCTaGAGGTCTGAGGAGGGACCT +
Preference number: 2 (lower is better)
Translates to: STLTRRARGAQAKVPELEALSQG*RSEEGP
Trigger: AGGTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGC...CTCTAATTCAGGGACTTTGGCTTGAGCCCCTCTCGCCCTCCTGGTGAGGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CCA 90 bp ACCCACATCAAGGCCATCCCCCTCATTAGCACCAATGGCCCCCAGGAGAGGGCCGGCCAAGGAACTGGGTaGGGGCTCTCTCTCATGTGT +
Preference number: 2 (lower is better)
Translates to: THIKAIPLISTNGPQERAGQGTG*GLSLMC
Trigger: ACACATGAGAGAGAGCCCCCACCCAGTTCCTTGGCC...GGCCCTCTCCTGGGGGCCATTGGTGCTAATGAGGGGGATGGCCTTGATGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CCA 90 bp GAGAGAGAGAGGATAGAGACAAAGACAGCGCGGGCAGCCCGAGGCCCCAGCAGGCTTGGGGCTCTGGTGTaGGGGCATTTCTCTCTGATG +
Preference number: 2 (lower is better)
Translates to: ERERIETKTARAARGPSRLGALV*GHFSLM
Trigger: CATCAGAGAGAAATGCCCCCACACCAGAGCCCCAAG...CCTGCTGGGGCCTCGGGCTGCCCGCGCTGTCTTTGTCTCTATCCTCTCTCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CCA 90 bp GGAGGGTTCTGGGAGACGCTCACGCACAGCCCTCCTACCCCCGACCCAACCAATGTGCGGGTGTGTGTGTaGGAGCTGAATCTATCCAAG +
Preference number: 2 (lower is better)
Translates to: GGFWETLTHSPPTPDPTNVRVCV*ELNLSK
Trigger: CTTGGATAGATTCAGCTCCCACACACACACCCGCAC...ATTGGTTGGGTCGGGGGTAGGAGGGCTGTGCGTGAGCGTCTCCCAGAACCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CCA 90 bp ACCCACATCAAGGCCATCCCCCTCATTAGCACCAATGGCCCCCAGGAGAGGGCCCCCCTACGGTCAAGGTaGCTTGTCCCTTCTCAATCC +
Preference number: 2 (lower is better)
Translates to: THIKAIPLISTNGPQERAPLRSR*LVPSQS
Trigger: GGATTGAGAAGGGACAAGCCACCTTGACCGTAGGGG...GGCCCTCTCCTGGGGGCCATTGGTGCTAATGAGGGGGATGGCCTTGATGTGGGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CCA 90 bp GGAGGGTTCTGGGAGACGCTCACGCACAGCCCTCCTACCCCCGACCCAACCAATCATTTCTCTCTGATGTaGGGGAAGAAGGGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: GGFWETLTHSPPTPDPTNHFSLM*GKKGQL
Trigger: GAGCTGCCCCTTCTTCCCCCACATCAGAGAGAAATG...ATTGGTTGGGTCGGGGGTAGGAGGGCTGTGCGTGAGCGTCTCCCAGAACCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR TCA 90 bp GGAGGGTTCTGGGAGACGCTCACGCACAGCCCTCCTACCCCCGACCCAACCAATTGTGTGTGTGGGAGCTaGATCTATCCAAGGACGAGA +
Preference number: 2 (lower is better)
Translates to: GGFWETLTHSPPTPDPTNCVCGS*IYPRTR
Trigger: TCTCGTCCTTGGATAGATTCAGCTCCCACACACACA...ATTGGTTGGGTCGGGGGTAGGAGGGCTGTGCGTGAGCGTCTCCCAGAACCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGGCCTGGGAGAAGGTATaGCACTCCTTCTCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRAWEKV*HSFSFP
Trigger: GGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGC...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
3UTR-3UTR CCA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGGGTGGTCTTACGGGATaGGAGGTGACCAGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLGGLTG*EVTSPA
Trigger: AGCAGGGCTGGTCACCTCCCATCCCGTAAGACCACC...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
3UTR-3UTR CCA 90 bp GGCACTCCTGAGTCGCCCTGGCTCCTCCCCTACCATGTGTACTCACTCACACATCTACCCTTGGGGCTCTaGTGTGGGGGCATTTCTCTC +
Preference number: 2 (lower is better)
Translates to: GTPESPWLLPYHVYSLTHLPLGL*CGGISL
Trigger: GAGAGAAATGCCCCCACACCAGAGCCCCAAGGGTAG...ATGTGTGAGTGAGTACACATGGTAGGGGAGGAGCCAGGGCGACTCAGGAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR CAA 90 bp CCTGAACGATTGGGGAAGGACAGTGCCCTGACGGGCAGCATAGCATaGCCTTCCCATGTCCGTGTGTGCATGTCCGTGTGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: PERLGKDSALTGSIA*PSHVRVCMSVCVCV
Trigger: CACACACACACACACGGACATGCACACACGGACATGGGAAGGCAATGCTATGCTGCCCGTCAGGGCACTGTCCTTCCCCAATCGTTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR TCA 90 bp CTGGCATCCAGCATGAGAGGTAGATGGAACTCAGCGGGCACGAGTGGCAGAAAGTGTGTGTGTAGGGGGTaGGTTGAGGGCATCTTCCCC +
Preference number: 2 (lower is better)
Translates to: LASSMRGRWNSAGTSGRKCVCRG*VEGIFP
Trigger: GGGGAAGATGCCCTCAACTCACCCCCTACACACACA...CTTTCTGCCACTCGTGCCCGCTGAGTTCCATCTACCTCTCATGCTGGATGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR TCA 90 bp AGACAGCAGACAGGTCAGGAATTCCACTGGGCCCCCAGGCGTGGTAGGAAGGTAGTTAACTCACAGCTCTaGTCGGCAGCCCTACCCTTG +
Preference number: 2 (lower is better)
Translates to: RQQTGQEFHWAPRRGRKVVNSQL*SAALPL
Trigger: CAAGGGTAGGGCTGCCGATCAGAGCTGTGAGTTAAC...TACCTTCCTACCACGCCTGGGGGCCCAGTGGAATTCCTGACCTGTCTGCTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CCA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGCTTGGGGCAGAGGCCTaGGAGAAGGTATGGCACTCC +
Preference number: 2 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWLGAEA*EKVWHS
Trigger: GGAGTGCCATACCTTCTCCCAGGCCTCTGCCCCAAG...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
3UTR-3UTR TCA 90 bp AGACAGCAGACAGGTCAGGAATTCCACTGGGCCCCCAGGCGTGGTAGGAAGGTAAGCTGGCATCCAGCATaGGAGGTAGATGGAACTCAG +
Preference number: 2 (lower is better)
Translates to: RQQTGQEFHWAPRRGRKVSWHPA*EVDGTQ
Trigger: CTGAGTTCCATCTACCTCTCATGCTGGATGCCAGCT...TACCTTCCTACCACGCCTGGGGGCCCAGTGGAATTCCTGACCTGTCTGCTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR GCA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGCTTTCAGGCACCTCCTaGTCTTGGGGCAGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRLSGTS*SWGRGL
Trigger: CAGGCCTCTGCCCCAAGAGCAGGAGGTGCCTGAAAG...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
3UTR-3UTR GCA 90 bp AGGCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTTTCAGGCACCTCCTaGTCTTGGGGCAGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: RQRELHSKKQGSLAMFGLLSGTS*SWGRGL
Trigger: CAGGCCTCTGCCCCAAGAGCAGGAGGTGCCTGAAAG...CAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
3UTR-3UTR GCA 90 bp GAGAGAGAGAGGATAGAGACAAAGACAGCGCGGGCAGCCCGAGGCCCCAGCAGGTTTGTCTTCTCCCCTTaGTTGGTTTCCAAAGTGCAG +
Preference number: 2 (lower is better)
Translates to: ERERIETKTARAARGPSRFVFSP*LVSKVQ
Trigger: CTGCACTTTGGAAACCAAGCAAGGGGAGAAGACAAA...CCTGCTGGGGCCTCGGGCTGCCCGCGCTGTCTTTGTCTCTATCCTCTCTCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CCA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTCTTGGGGCAGAGGCCTaGGAGAAGGTATGGCACTCC +
Preference number: 2 (lower is better)
Translates to: AEGTTQQKARESGHVWPALGAEA*EKVWHS
Trigger: GGAGTGCCATACCTTCTCCCAGGCCTCTGCCCCAAG...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
3UTR-3UTR CCA 90 bp ACCCACATCAAGGCCATCCCCCTCATTAGCACCAATGGCCCCCAGGAGAGGGCCGCCTACCCATGGGACTaGAGTAATACAGGATTCAGT +
Preference number: 2 (lower is better)
Translates to: THIKAIPLISTNGPQERAAYPWD*SNTGFS
Trigger: ACTGAATCCTGTATTACTCCAGTCCCATGGGTAGGC...GGCCCTCTCCTGGGGGCCATTGGTGCTAATGAGGGGGATGGCCTTGATGTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR GCA 90 bp GAGAGAGAGAGGATAGAGACAAAGACAGCGCGGGCAGCCCGAGGCCCCAGCAGGTGCTTAAGACATTTTTaGCCCAATAGTGCAAAGCGC +
Preference number: 2 (lower is better)
Translates to: ERERIETKTARAARGPSRCLRHF*PNSAKR
Trigger: GCGCTTTGCACTATTGGGGCAAAAATGTCTTAAGCA...CCTGCTGGGGCCTCGGGCTGCCCGCGCTGTCTTTGTCTCTATCCTCTCTCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR GCA 90 bp AGACAGCAGACAGGTCAGGAATTCCACTGGGCCCCCAGGCGTGGTAGGAAGGTATGGCAGGTTCCCCACTaGTTAAGACATTTTTGCCCC +
Preference number: 2 (lower is better)
Translates to: RQQTGQEFHWAPRRGRKVWQVPH*LRHFCP
Trigger: GGGGCAAAAATGTCTTAAGCAGTGGGGAACCTGCCA...TACCTTCCTACCACGCCTGGGGGCCCAGTGGAATTCCTGACCTGTCTGCTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CCA 90 bp AAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTGCCTGGGAGAAGGTATaGCACTCCTTCTCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: KKQGSLAMFGLLRKGRWSAWEKV*HSFSFP
Trigger: GGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGC...AGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
3UTR-3UTR CCA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGGCCTGGGAGAAGGTATaGCACTCCTTCTCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRAWEKV*HSFSFP
Trigger: GGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGC...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
3UTR-3UTR CCA 90 bp ATAAATTTTAACCTCCAGAGGAGGAGCCAAGCCAAGCCGTTCTTTGCACCCAGGGAGAGGATGGGGTCCTaGGAACTGCAGGACACAGCT +
Preference number: 2 (lower is better)
Translates to: INFNLQRRSQAKPFFAPRERMGS*ELQDTA
Trigger: AGCTGTGTCCTGCAGTTCCCAGGACCCCATCCTCTC...CCTGGGTGCAAAGAACGGCTTGGCTTGGCTCCTCCTCTGGAGGTTAAAATTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CCA 90 bp GCACATAACAGACATACTGATTGTCAACGTGGGGCAGGAGTAGGAGCCCCTCAACTCAGCGGGCACGAGTaGCAGAAAGCAGAGGACATA +
Preference number: 2 (lower is better)
Translates to: AHNRHTDCQRGAGVGAPQLSGHE*QKAEDI
Trigger: TATGTCCTCTGCTTTCTGCCACTCGTGCCCGCTGAG...TTGAGGGGCTCCTACTCCTGCCCCACGTTGACAATCAGTATGTCTGTTATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR CAA 90 bp TTAAACCACTCTGTCTCCCCCACAACCCTCCCCTGGCCCTCTGATTaGTTCTGTTCCTGTCTCAAATCCAATAGTTCACAGCTGAGCTGG +
Preference number: 2 (lower is better)
Translates to: LNHSVSPTTLPWPSD*FCSCLKSNSSQLSW
Trigger: CCAGCTCAGCTGTGAACTATTGGATTTGAGACAGGAACAGAACAAATCAGAGGGCCAGGGGAGGGTTGTGGGGGAGACAGAGTGGTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR GCA 72 bp CCCAGCAACCCGTCCTCCCACCGATACTGCACCTGCTaGTCCACCCTGCCTGCCCTAGTGCCCCGGGCCAAT +
Preference number: 3 (lower is better)
Translates to: PSNPSSHRYCTC*STLPALVPRAN
Trigger: ATTGGCCCGGGGCACTAGGGCAGGCAGGGTGGAGCAGCAGGTGCAGTATCGGTGGGAGGACGGGTTGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR GCA 72 bp GTCTCTCTCTCACAACGCCCTGCCCTCTCCCAGCCCTaGAGACCCGCCACCAGGAGAAGGGGTAGGGGCTCC +
Preference number: 3 (lower is better)
Translates to: VSLSQRPALSQP*RPATRRRGRGS
Trigger: GGAGCCCCTACCCCTTCTCCTGGTGGCGGGTCTGCAGGGCTGGGAGAGGGCAGGGCGTTGTGAGAGAGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR GCA 72 bp CTCCCACCGATACTGCACCTGCTGCTCCACCCTGCCTaGCCTAGTGCCCCGGGCCAATACTGGGGGAGGCAT +
Preference number: 3 (lower is better)
Translates to: LPPILHLLLHPA*PSAPGQYWGRH
Trigger: ATGCCTCCCCCAGTATTGGCCCGGGGCACTAGGGCAGGCAGGGTGGAGCAGCAGGTGCAGTATCGGTGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR GCA 72 bp GTCCTCCTTATGGACGGTCTCTCTCTCACAACGCCCTaGCCTCTCCCAGCCCTGCAGACCCGCCACCAGGAG +
Preference number: 3 (lower is better)
Translates to: VLLMDGLSLTTP*PLPALQTRHQE
Trigger: CTCCTGGTGGCGGGTCTGCAGGGCTGGGAGAGGGCAGGGCGTTGTGAGAGAGAGACCGTCCATAAGGAGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CAA 90 bp GGCACTCCTGAGTCGCCCTGGCTCCTCCCCTACCATGTGTACTCACTCACACATTCGGCAGCCCTACCCTaGGGGCTCTGGTGTGGGGGC +
Preference number: 3 (lower is better)
Translates to: GTPESPWLLPYHVYSLTHSAALP*GLWCGG
Trigger: GCCCCCACACCAGAGCCCCAAGGGTAGGGCTGCCGA...ATGTGTGAGTGAGTACACATGGTAGGGGAGGAGCCAGGGCGACTCAGGAGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR TCA 72 bp AGGTGGTCTTACGGGATGGGAGGTGACCAGCCCTGCTaGGCCCACGCTCCCAGCTTTCAGGCACCTCCTGCT +
Preference number: 3 (lower is better)
Translates to: RWSYGMGGDQPC*AHAPSFQAPPA
Trigger: AGCAGGAGGTGCCTGAAAGCTGGGAGCGTGGGCTCAGCAGGGCTGGTCACCTCCCATCCCGTAAGACCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
3UTR TCA 72 bp GACAGCTGCCGCTCTAGAGCAGGTGCGTGGCACTCCTaGGTCGCCCTGGCTCCTCCCCTACCATGTGTACTC +
Preference number: 3 (lower is better)
Translates to: DSCRSRAGAWHS*VALAPPLPCVL
Trigger: GAGTACACATGGTAGGGGAGGAGCCAGGGCGACTCAGGAGTGCCACGCACCTGCTCTAGAGCGGCAGCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CAA 90 bp GCAGGGACTGGGACAGCTGCCGCTCTAGAGCAGGTGCGTGGCACTCCTGAGTCGAAGCCAAGCCGTTCTTaGCACCCAGGCATCTGGGGA +
Preference number: 3 (lower is better)
Translates to: AGTGTAAALEQVRGTPESKPSRS*HPGIWG
Trigger: TCCCCAGATGCCTGGGTGCAAAGAACGGCTTGGCTT...CGACTCAGGAGTGCCACGCACCTGCTCTAGAGCGGCAGCTGTCCCAGTCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR TCA 72 bp GCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGTaGCCAGCCCTGCTGAGCCCACGCTCCCAGCTTTCA +
Preference number: 3 (lower is better)
Translates to: AEEGKVVLRDGR*PALLSPRSQLS
Trigger: TGAAAGCTGGGAGCGTGGGCTCAGCAGGGCTGGTCACCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
3UTR TCA 72 bp GGGTGGCCAGGACCCTGTTGTGTTAACTCACAGCTCTaGTCGGCAGCCCTACCCTTGGGGCTCTGGTGTGGG +
Preference number: 3 (lower is better)
Translates to: GWPGPCCVNSQL*SAALPLGLWCG
Trigger: CCCACACCAGAGCCCCAAGGGTAGGGCTGCCGATCAGAGCTGTGAGTTAACACAACAGGGTCCTGGCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR CCA 72 bp AGCCCACGCTCCCAGCTTTCAGGCACCTCCTGCTCTTaGGGCAGAGGCCTGGGAGAAGGTATGGCACTCCTT +
Preference number: 3 (lower is better)
Translates to: SPRSQLSGTSCS*GRGLGEGMALL
Trigger: AAGGAGTGCCATACCTTCTCCCAGGCCTCTGCCCCAAGAGCAGGAGGTGCCTGAAAGCTGGGAGCGTGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
3UTR CCA 72 bp GCTCTAGAGCAGGTGCGTGGCACTCCTGAGTCGCCCTaGCTCCTCCCCTACCATGTGTACTCACTCACACAT +
Preference number: 3 (lower is better)
Translates to: ALEQVRGTPESP*LLPYHVYSLTH
Trigger: ATGTGTGAGTGAGTACACATGGTAGGGGAGGAGCCAGGGCGACTCAGGAGTGCCACGCACCTGCTCTAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR CCA 72 bp CAGGAGTTCCCAGGGCAGGAGTTACTGTCCTCCTTATaGACGGTCTCTCTCTCACAACGCCCTGCCCTCTCC +
Preference number: 3 (lower is better)
Translates to: QEFPGQELLSSL*TVSLSQRPALS
Trigger: GGAGAGGGCAGGGCGTTGTGAGAGAGAGACCGTCCATAAGGAGGACAGTAACTCCTGCCCTGGGAACTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CAA 90 bp GGGGGTGGCCAGGACCCTGTTGTGTTAACTCACAGCTCTGATCGGCAGCCCTACTACGGTCAAGGTGGCTaGTCCCTTCTCAATCCTCCC +
Preference number: 3 (lower is better)
Translates to: GGGQDPVVLTHSSDRQPYYGQGG*SLLNPP
Trigger: GGGAGGATTGAGAAGGGACAAGCCACCTTGACCGTA...GTAGGGCTGCCGATCAGAGCTGTGAGTTAACACAACAGGGTCCTGGCCACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CAA 90 bp AGACAGCAGACAGGTCAGGAATTCCACTGGGCCCCCAGGCGTGGTAGGAAGGTAACGGGCAGCATAGCATaGCCTTCCCATGTCCGTGTG +
Preference number: 3 (lower is better)
Translates to: RQQTGQEFHWAPRRGRKVTGSIA*PSHVRV
Trigger: CACACGGACATGGGAAGGCAATGCTATGCTGCCCGT...TACCTTCCTACCACGCCTGGGGGCCCAGTGGAATTCCTGACCTGTCTGCTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CAA 90 bp AGACAGCAGACAGGTCAGGAATTCCACTGGGCCCCCAGGCGTGGTAGGAAGGTAGGAACACCTGAACGATaGGGGAAGGACAGTGCCCTG +
Preference number: 3 (lower is better)
Translates to: RQQTGQEFHWAPRRGRKVGTPER*GKDSAL
Trigger: CAGGGCACTGTCCTTCCCCAATCGTTCAGGTGTTCC...TACCTTCCTACCACGCCTGGGGGCCCAGTGGAATTCCTGACCTGTCTGCTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CAA 90 bp GGCACTCCTGAGTCGCCCTGGCTCCTCCCCTACCATGTGTACTCACTCACACATAGCAAGTTCAGTTGTTaGCCCTGTCCCAGGGCTGGA +
Preference number: 3 (lower is better)
Translates to: GTPESPWLLPYHVYSLTHSKFSC*PCPRAG
Trigger: TCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCT...ATGTGTGAGTGAGTACACATGGTAGGGGAGGAGCCAGGGCGACTCAGGAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR GCA 72 bp GCTCACGCACAGCCCTCCTACCCCCGACCCAACCAATaGAGCAGCATCCGGTTTCTAGCTAATACTGCAGGA +
Preference number: 3 (lower is better)
Translates to: AHAQPSYPRPNQ*SSIRFLANTAG
Trigger: TCCTGCAGTATTAGCTAGAAACCGGATGCTGCTGCATTGGTTGGGTCGGGGGTAGGAGGGCTGTGCGTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR TCA 72 bp GCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTaGGGAAGGGAAGGTGGTCTTACGGGATGGGAGGTG +
Preference number: 3 (lower is better)
Translates to: AKSKGVWPCLAC*GREGGLTGWEV
Trigger: CACCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
3UTR CCA 72 bp GTGTTAACTCACAGCTCTGATCGGCAGCCCTACCCTTaGGGCTCTGGTGTGGGGGCATTTCTCTCTGATGTG +
Preference number: 3 (lower is better)
Translates to: VLTHSSDRQPYP*GSGVGAFLSDV
Trigger: CACATCAGAGAGAAATGCCCCCACACCAGAGCCCCAAGGGTAGGGCTGCCGATCAGAGCTGTGAGTTAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CAA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGAGGACAAGTAAGATGTaGCCAGGCAGAGAAAGGGGG +
Preference number: 3 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLRTSKM*PGRERG
Trigger: CCCCCTTTCTCTGCCTGGCAACATCTTACTTGTCCT...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
3UTR TCA 72 bp TGCCAGGCCCTGCACCGGGCACTGGGGATACAGACATaGTTCAGACACAGTCTAGCTTGGGAAACAGACTCA +
Preference number: 3 (lower is better)
Translates to: CQALHRALGIQT*FRHSLAWETDS
Trigger: TGAGTCTGTTTCCCAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
3UTR CCA 72 bp CCAGGCGTGGTAGGAAGGTACAAGAGGGCCTACCCATaGGACTGGAGTAATACAGGATTCAGTACTCCAGGA +
Preference number: 3 (lower is better)
Translates to: PGVVGRYKRAYP*DWSNTGFSTPG
Trigger: TCCTGGAGTACTGAATCCTGTATTACTCCAGTCCCATGGGTAGGCCCTCTTGTACCTTCCTACCACGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR GCA 72 bp AAGTGTCACTTATCTAAACACCCCCATTCTGGTACCTaGCCGCCCAGAGTTAGTGCAGTGAGTAGGAGCTGG +
Preference number: 3 (lower is better)
Translates to: KCHLSKHPHSGT*PPRVSAVSRSW
Trigger: CCAGCTCCTACTCACTGCACTAACTCTGGGCGGGCAGGTACCAGAATGGGGGTGTTTAGATAAGTGACACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR CCA 72 bp ACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTaGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGAT +
Preference number: 3 (lower is better)
Translates to: TTQQKARESGHV*PAEEGKVVLRD
Trigger: ATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
3UTR CCA 72 bp CTGGTCAGTTTGTGGGGTGGGTACTCTGCCAGCAGATaGGAGGATATAGGGAAACAGCACACAAGTCTAAGG +
Preference number: 3 (lower is better)
Translates to: LVSLWGGYSASR*EDIGKQHTSLR
Trigger: CCTTAGACTTGTGTGCTGTTTCCCTATATCCTCCCATCTGCTGGCAGAGTACCCACCCCACAAACTGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR-3UTR CAA 90 bp GGCACTCCTGAGTCGCCCTGGCTCCTCCCCTACCATGTGTACTCACTCACACATCTAGTTTTTCTTCATTaGTCTTCTCCCCTTGCTTGG +
Preference number: 3 (lower is better)
Translates to: GTPESPWLLPYHVYSLTHLVFLH*SSPLAW
Trigger: CCAAGCAAGGGGAGAAGACAAATGAAGAAAAACTAG...ATGTGTGAGTGAGTACACATGGTAGGGGAGGAGCCAGGGCGACTCAGGAGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp GCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGTCTCAGCGCCCCGTaGTGGGGGCGTCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: AEAWEKVWHSFSFPIGLLGLSAP*WGRPWG
Trigger: CCCCCATGGACGCCCCCAGCACGGGGCGCTGAGACC...CAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GGCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGTCTCAGCGCCCCGTaGTGGGGGCGTCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: GRGLGEGMALLLLPHRPSGLSAP*WGRPWG
Trigger: CCCCCATGGACGCCCCCAGCACGGGGCGCTGAGACC...AGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GAGAGAGAGAGGATAGAGACAAAGACAGCGCGGGCAGCCCGAGGCCCCAGCAGGCCCTCAAGTCACCCCTaGCGGTCCCACCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ERERIETKTARAARGPSRPSSHP*RSHPSL
Trigger: CAGGGAGGGGTGGGACCGGCAGGGGTGACTTGAGGG...CCTGCTGGGGCCTCGGGCTGCCCGCGCTGTCTTTGTCTCTATCCTCTCTCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp GGCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGCCCGGCCGGCCTTCTaGCGCTGCCCCCTTGTACAG +
Preference number: 4 (lower is better)
Translates to: GRGLGEGMALLLLPHRPSARPAF*RCPLVQ
Trigger: CTGTACAAGGGGGCAGCGGCAGAAGGCCGGCCGGGC...AGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000394121.8
CDS-3UTR GCA 90 bp GAGAGAGAGAGGATAGAGACAAAGACAGCGCGGGCAGCCCGAGGCCCCAGCAGGTCCCACCCCACCTCCTaGTCCCATGGGAGGACCACC +
Preference number: 4 (lower is better)
Translates to: ERERIETKTARAARGPSRSHPTS*SHGRTT
Trigger: GGTGGTCCTCCCATGGGAGCAGGAGGTGGGGTGGGA...CCTGCTGGGGCCTCGGGCTGCCCGCGCTGTCTTTGTCTCTATCCTCTCTCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp ACCCACATCAAGGCCATCCCCCTCATTAGCACCAATGGCCCCCAGGAGAGGGCCGCCCTCTCCCAGCCCTaGAGACCCGCCACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: THIKAIPLISTNGPQERAALSQP*RPATRR
Trigger: TCTCCTGGTGGCGGGTCTGCAGGGCTGGGAGAGGGC...GGCCCTCTCCTGGGGGCCATTGGTGCTAATGAGGGGGATGGCCTTGATGTGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGGGGCTGGGGGCAAGCTaGGTTTGTGGGTCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGGLGAS*VCGSRA
Trigger: AGCCCGGGACCCACAAACCCAGCTTGCCCCCAGCCC...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
66% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp ACCCACATCAAGGCCATCCCCCTCATTAGCACCAATGGCCCCCAGGAGAGGGCCCGGCAGCCCTACCCTTaGGGCTCTGGTGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: THIKAIPLISTNGPQERARQPYP*GSGVGA
Trigger: TGCCCCCACACCAGAGCCCCAAGGGTAGGGCTGCCG...GGCCCTCTCCTGGGGGCCATTGGTGCTAATGAGGGGGATGGCCTTGATGTGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp AGACAGCAGACAGGTCAGGAATTCCACTGGGCCCCCAGGCGTGGTAGGAAGGTAGGTGCGTGGCACTCCTaGGTCGCCCTGGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: RQQTGQEFHWAPRRGRKVGAWHS*VALAPP
Trigger: GGGAGGAGCCAGGGCGACTCAGGAGTGCCACGCACC...TACCTTCCTACCACGCCTGGGGGCCCAGTGGAATTCCTGACCTGTCTGCTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGAGCTCCAGGAGACGCTaGTGCGGGCTCTTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGSSRRR*CGLFGL
Trigger: GAGCCCGAAGAGCCCGCAGCAGCGTCTCCTGGAGCT...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GGAGGGTTCTGGGAGACGCTCACGCACAGCCCTCCTACCCCCGACCCAACCAATAGGGACTGGGACAGCTaGCGCTCTAGAGCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: GGFWETLTHSPPTPDPTNRDWDS*RSRAGA
Trigger: CGCACCTGCTCTAGAGCGGCAGCTGTCCCAGTCCCT...ATTGGTTGGGTCGGGGGTAGGAGGGCTGTGCGTGAGCGTCTCCCAGAACCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp GAGAGAGAGAGGATAGAGACAAAGACAGCGCGGGCAGCCCGAGGCCCCAGCAGGTCTCTCACAACGCCCTaGCCTCTCCCAGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ERERIETKTARAARGPSRSLTTP*PLPALQ
Trigger: CTGCAGGGCTGGGAGAGGGCAGGGCGTTGTGAGAGA...CCTGCTGGGGCCTCGGGCTGCCCGCGCTGTCTTTGTCTCTATCCTCTCTCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGTGCTGTCCTTCCGGGTaGACGCCCAGTGACCCGCCC +
Preference number: 4 (lower is better)
Translates to: AEAWEKVWHSFSFPIGLLCCPSG*TPSDPP
Trigger: GGGCGGGTCACTGGGCGTCCACCCGGAAGGACAGCA...CAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000394121.8
CDS-3UTR CCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGTCCCCATCGGCCTTCTaGGGGGCTTCAGGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGSPSAF*GASGRG
Trigger: GCCTCTCCCTGAAGCCCCCCAGAAGGCCGATGGGGA...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GGAGGGTTCTGGGAGACGCTCACGCACAGCCCTCCTACCCCCGACCCAACCAATGGTCAGGAATTCCACTaGGCCCCCAGGCGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: GGFWETLTHSPPTPDPTNGQEFH*APRRGR
Trigger: CCTACCACGCCTGGGGGCCCAGTGGAATTCCTGACC...ATTGGTTGGGTCGGGGGTAGGAGGGCTGTGCGTGAGCGTCTCCCAGAACCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp GCAGGGACTGGGACAGCTGCCGCTCTAGAGCAGGTGCGTGGCACTCCTGAGTCGGTTCTCCTCTGGGTCTaGCCCACACTCCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: AGTGTAAALEQVRGTPESVLLWV*PTLHLA
Trigger: AGCAAGGTGGAGTGTGGGTCAGACCCAGAGGAGAAC...CGACTCAGGAGTGCCACGCACCTGCTCTAGAGCGGCAGCTGTCCCAGTCCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp GAGAGAGAGAGGATAGAGACAAAGACAGCGCGGGCAGCCCGAGGCCCCAGCAGGCCTTCCCCTACCTTCTaGGAGGATGGGGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: ERERIETKTARAARGPSRPSPTF*EDGVLG
Trigger: TCCCAGGACCCCATCCTCTCAGAAGGTAGGGGAAGG...CCTGCTGGGGCCTCGGGCTGCCCGCGCTGTCTTTGTCTCTATCCTCTCTCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp GCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGTCCAGGAGACGCTGCTaGGGGCTCTTCGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: AEAWEKVWHSFSFPIGLLSRRRC*GLFGLW
Trigger: CCAGAGCCCGAAGAGCCCGCAGCAGCGTCTCCTGGA...CAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp AGACGCTCACGCACAGCCCTCCTACCCCCGACCCAACCAATGCAGCAGCATCCGGGCAGGCCCCGATCATaGGGAGGTCAGTCACCTTCA +
Preference number: 4 (lower is better)
Translates to: RRSRTALLPPTQPMQQHPGRPRS*GGQSPS
Trigger: TGAAGGTGACTGACCTCCGCATGATCGGGGCCTGCC...CGGATGCTGCTGCATTGGTTGGGTCGGGGGTAGGAGGGCTGTGCGTGAGCGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp GGCACTCCTGAGTCGCCCTGGCTCCTCCCCTACCATGTGTACTCACTCACACATCTGCTCCACCCTGCCTaGCCTAGTGCCCCGGGCCAA +
Preference number: 4 (lower is better)
Translates to: GTPESPWLLPYHVYSLTHLLHPA*PSAPGQ
Trigger: TTGGCCCGGGGCACTAGGGCAGGCAGGGTGGAGCAG...ATGTGTGAGTGAGTACACATGGTAGGGGAGGAGCCAGGGCGACTCAGGAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGAGCTGCTGCTCAAGCTaGCGGACCTGCGGACCCTTC +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGSCCSS*RTCGPF
Trigger: GAAGGGTCCGCAGGTCCGGCAGCTTGAGCAGCAGCT...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584985.5
CDS-3UTR CCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGTCCCGGGCTGTGTGCTaGGGGAGTAGCTTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGSRAVC*GSSFGV
Trigger: GACTCCGAAGCTACTCCCCCAGCACACAGCCCGGGA...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp ACCCACATCAAGGCCATCCCCCTCATTAGCACCAATGGCCCCCAGGAGAGGGCCGGCAAGCTGGGTTTGTaGGTCCCGGGCTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: THIKAIPLISTNGPQERAGKLGL*VPGCVL
Trigger: CAGCACACAGCCCGGGACCCACAAACCCAGCTTGCC...GGCCCTCTCCTGGGGGCCATTGGTGCTAATGAGGGGGATGGCCTTGATGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGCAGGTGGGAGGGCTaGGGGCAAGCTGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: AEAWEKVWHSFSFPIGLLGRWEG*GQAGFV
Trigger: CACAAACCCAGCTTGCCCCCAGCCCTCCCACCTGCC...CAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GGCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTAGCACGCCAAGAGACTaGGGTGGGCACACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: GRGLGEGMALLLLPHRPSSTPRD*GGHTGP
Trigger: GGGGCCAGTGTGCCCACCCCAGTCTCTTGGCGTGCT...AGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GCAGGGACTGGGACAGCTGCCGCTCTAGAGCAGGTGCGTGGCACTCCTGAGTCGTTCCAATGGCTGCCCTaGGCATTGGTGCTGCGATGG +
Preference number: 4 (lower is better)
Translates to: AGTGTAAALEQVRGTPESFQWLP*ALVLRW
Trigger: CCATCGCAGCACCAATGCCCAGGGCAGCCATTGGAA...CGACTCAGGAGTGCCACGCACCTGCTCTAGAGCGGCAGCTGTCCCAGTCCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GCAGGGACTGGGACAGCTGCCGCTCTAGAGCAGGTGCGTGGCACTCCTGAGTCGCTGAGCTGGCTTCTGTaGTGTGTGCTCGTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: AGTGTAAALEQVRGTPESLSWLL*CVLVWG
Trigger: CCCCCAAACGAGCACACACCACAGAAGCCAGCTCAG...CGACTCAGGAGTGCCACGCACCTGCTCTAGAGCGGCAGCTGTCCCAGTCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp AGGCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGTCCTGCGCCCGGGTGTaGGTGCGAGTGAGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: RQRELHSKKQGSLAMFGLSCARV*VRVSAG
Trigger: CCCCGCGCTCACTCGCACTCACACCCGGGCGCAGGA...CAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR TCA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGTCCTGCGCCCGGGTGTaGGTGCGAGTGAGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRSCARV*VRVSAG
Trigger: CCCCGCGCTCACTCGCACTCACACCCGGGCGCAGGA...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR TCA 90 bp GGAGGGTTCTGGGAGACGCTCACGCACAGCCCTCCTACCCCCGACCCAACCAATTGTGTGTGTAGGGGGTaGGTTGAGGGCATCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GGFWETLTHSPPTPDPTNCVCRG*VEGIFP
Trigger: GGGGAAGATGCCCTCAACTCACCCCCTACACACACA...ATTGGTTGGGTCGGGGGTAGGAGGGCTGTGCGTGAGCGTCTCCCAGAACCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGCCGACATGCAGCCCTaGGCCCAGCACCCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GSAGVCVGAESIQGREEGADMQP*AQHPLV
Trigger: GACCAGAGGGTGCTGGGCTCAGGGCTGCATGTCGGC...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp GGGGGTGGCCAGGACCCTGTTGTGTTAACTCACAGCTCTGATCGGCAGCCCTACAGGCACATGCACAGGTaGCAGCGGGTGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GGGQDPVVLTHSSDRQPYRHMHR*QRVLLQ
Trigger: CTGGAGGAGCACCCGCTGTCACCTGTGCATGTGCCT...GTAGGGCTGCCGATCAGAGCTGTGAGTTAACACAACAGGGTCCTGGCCACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp ATTTTAACCTCCAGAGGAGGAGCCAAGCCAAGCCGTTCTTTGCACCCAGGCATCGGTCTCAGCGCCCCGTaGTGGGGGCGTCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: ILTSRGGAKPSRSLHPGIGLSAP*WGRPWG
Trigger: CCCCCATGGACGCCCCCAGCACGGGGCGCTGAGACC...GATGCCTGGGTGCAAAGAACGGCTTGGCTTGGCTCCTCCTCTGGAGGTTAAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp GAGAGAGAGAGGATAGAGACAAAGACAGCGCGGGCAGCCCGAGGCCCCAGCAGGGTGGGCTCTGGTCGCTaGTGCAGTGATCGGATCATC +
Preference number: 4 (lower is better)
Translates to: ERERIETKTARAARGPSRVGSGR*CSDRII
Trigger: GATGATCCGATCACTGCAGCAGCGACCAGAGCCCAC...CCTGCTGGGGCCTCGGGCTGCCCGCGCTGTCTTTGTCTCTATCCTCTCTCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGTCCAGGAGACGCTGCTaGGGGCTCTTCGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRSRRRC*GLFGLW
Trigger: CCAGAGCCCGAAGAGCCCGCAGCAGCGTCTCCTGGA...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGAGCTCCAGGAGACGCTaGTGCGGGCTCTTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRSSRRR*CGLFGL
Trigger: GAGCCCGAAGAGCCCGCAGCAGCGTCTCCTGGAGCT...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGGGGAGTCCGCCTCACTaGTGTCGTCTTCCCCACAGA +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGGSPPH*CRLPHR
Trigger: TCTGTGGGGAAGACGACAGCAGTGAGGCGGACTCCC...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
62% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGAGAGGCTGCATTGCCTaGCAGGTCCTCGCAGACCTC +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGRGCIA*QVLADL
Trigger: GAGGTCTGCGAGGACCTGGCAGGCAATGCAGCCTCT...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GCAGGGACTGGGACAGCTGCCGCTCTAGAGCAGGTGCGTGGCACTCCTGAGTCGGTGGGGTGGGTACTCTaGCAGCAGATGGGAGGATAT +
Preference number: 4 (lower is better)
Translates to: AGTGTAAALEQVRGTPESVGWVL*QQMGGY
Trigger: ATATCCTCCCATCTGCTGGCAGAGTACCCACCCCAC...CGACTCAGGAGTGCCACGCACCTGCTCTAGAGCGGCAGCTGTCCCAGTCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGGCTGGGGGCAAGCTaGGTTTGTGGGTCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREEGLGAS*VCGSRA
Trigger: AGCCCGGGACCCACAAACCCAGCTTGCCCCCAGCCC...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGTCCCCATCGGCCTTCTaGGGGGCTTCAGGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRSPSAF*GASGRG
Trigger: GCCTCTCCCTGAAGCCCCCCAGAAGGCCGATGGGGA...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GGAGGGTTCTGGGAGACGCTCACGCACAGCCCTCCTACCCCCGACCCAACCAATCTACCCTTGGGGCTCTaGTGTGGGGGCATTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GGFWETLTHSPPTPDPTNLPLGL*CGGISL
Trigger: GAGAGAAATGCCCCCACACCAGAGCCCCAAGGGTAG...ATTGGTTGGGTCGGGGGTAGGAGGGCTGTGCGTGAGCGTCTCCCAGAACCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GGGGGTGGCCAGGACCCTGTTGTGTTAACTCACAGCTCTGATCGGCAGCCCTACGGTCCCACCCCTCCCTaGGGAAGAGACCTACCTCCT +
Preference number: 4 (lower is better)
Translates to: GGGQDPVVLTHSSDRQPYGPTPP*GRDLPP
Trigger: AGGAGGTAGGTCTCTTCCCCAGGGAGGGGTGGGACC...GTAGGGCTGCCGATCAGAGCTGTGAGTTAACACAACAGGGTCCTGGCCACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp GCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGAGGGCACAGCACCCATaGTACCCGCCTCAGCACTTG +
Preference number: 4 (lower is better)
Translates to: AEAWEKVWHSFSFPIGLLRAQHP*YPPQHL
Trigger: CAAGTGCTGAGGCGGGTATCATGGGTGCTGTGCCCT...CAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGCGGCACAGCTGGCACTaGTTGCGGGTGATCTTGTCA +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGRHSWH*LRVILS
Trigger: TGACAAGATCACCCGCAATCAGTGCCAGCTGTGCCG...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp GCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGCGGCGATGCACTTCTTaGAGCGGCACAGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: AEAWEKVWHSFSFPIGLLRRCTS*SGTAGT
Trigger: AGTGCCAGCTGTGCCGCTTCAAGAAGTGCATCGCCG...CAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp GGGGGTGGCCAGGACCCTGTTGTGTTAACTCACAGCTCTGATCGGCAGCCCTACCGGCGATGCACTTCTTaGAGCGGCACAGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: GGGQDPVVLTHSSDRQPYRRCTS*SGTAGT
Trigger: AGTGCCAGCTGTGCCGCTTCAAGAAGTGCATCGCCG...GTAGGGCTGCCGATCAGAGCTGTGAGTTAACACAACAGGGTCCTGGCCACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp GGCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTAGCTGGGGAAGGAGGTaGCACTTGAGTTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GRGLGEGMALLLLPHRPSSWGRR*HLSWGL
Trigger: GAGGCCCCAACTCAAGTGTCACCTCCTTCCCCAGCT...AGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR TCA 90 bp GGAGGGTTCTGGGAGACGCTCACGCACAGCCCTCCTACCCCCGACCCAACCAATGTTAACTCACAGCTCTaGTCGGCAGCCCTACCCTTG +
Preference number: 4 (lower is better)
Translates to: GGFWETLTHSPPTPDPTNVNSQL*SAALPL
Trigger: CAAGGGTAGGGCTGCCGATCAGAGCTGTGAGTTAAC...ATTGGTTGGGTCGGGGGTAGGAGGGCTGTGCGTGAGCGTCTCCCAGAACCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGCCAAGTCCATGGCCATaGCCACGGCGATGCACTTCT +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGPSPWP*PRRCTS
Trigger: AGAAGTGCATCGCCGTGGGCATGGCCATGGACTTGG...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGCCTGGGCATTGGTGCTaGGATGGGCCTCTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: AEAWEKVWHSFSFPIGLLPGHWC*DGPLWQ
Trigger: TTGCCACAGAGGCCCATCGCAGCACCAATGCCCAGG...CAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGTGCCCTGGGCATTGGTaGTGCGATGGGCCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRCPGHW*CDGPLW
Trigger: CCACAGAGGCCCATCGCAGCACCAATGCCCAGGGCA...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GGCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTCCGGCCTTCTGCCGCTaGCCCCTTGTACAGAATCGA +
Preference number: 4 (lower is better)
Translates to: GRGLGEGMALLLLPHRPSPAFCR*PLVQNR
Trigger: TCGATTCTGTACAAGGGGGCAGCGGCAGAAGGCCGG...AGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000394121.8
CDS-3UTR GCA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGCCCGGCCGGCCTTCTaGCGCTGCCCCCTTGTACAG +
Preference number: 4 (lower is better)
Translates to: AEGTTQQKARESGHVWPAARPAF*RCPLVQ
Trigger: CTGTACAAGGGGGCAGCGGCAGAAGGCCGGCCGGGC...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000394121.8
CDS-3UTR GCA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGTCCAGGAGACGCTGCTaGGGGCTCTTCGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLSRRRC*GLFGLW
Trigger: CCAGAGCCCGAAGAGCCCGCAGCAGCGTCTCCTGGA...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GGCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTAGAGGCTGCATTGCCTaGCAGGTCCTCGCAGACCTC +
Preference number: 4 (lower is better)
Translates to: GRGLGEGMALLLLPHRPSRGCIA*QVLADL
Trigger: GAGGTCTGCGAGGACCTGGCAGGCAATGCAGCCTCT...AGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp AGCACCCTCACCAGGAGGGCGAGAGGGGCTCAAGCCAAAGTCCCTGAATTAGAGCCACCCATCCATCCCTaGCGACATGCAGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: STLTRRARGAQAKVPELEPPIHP*RHAALS
Trigger: GCTCAGGGCTGCATGTCGGCAGGGATGGATGGGTGG...CTCTAATTCAGGGACTTTGGCTTGAGCCCCTCTCGCCCTCCTGGTGAGGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp CTGGCATCCAGCATGAGAGGTAGATGGAACTCAGCGGGCACGAGTGGCAGAAAGGGCAGGTGGGAGGGCTaGGGGCAAGCTGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LASSMRGRWNSAGTSGRKGRWEG*GQAGFV
Trigger: CACAAACCCAGCTTGCCCCCAGCCCTCCCACCTGCC...CTTTCTGCCACTCGTGCCCGCTGAGTTCCATCTACCTCTCATGCTGGATGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGCAGGTGGGAGGGCTaGGGGCAAGCTGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREEGRWEG*GQAGFV
Trigger: CACAAACCCAGCTTGCCCCCAGCCCTCCCACCTGCC...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGACCCGCCTCAGCACTTaGCCTTTCACACCATGCCCT +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGTRLST*PFTPCP
Trigger: AGGGCATGGTGTGAAAGGCCAAGTGCTGAGGCGGGT...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAAGCACGCCAAGAGACTaGGGTGGGCACACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: GSAGVCVGAESIQGREEGSTPRD*GGHTGP
Trigger: GGGGCCAGTGTGCCCACCCCAGTCTCTTGGCGTGCT...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAAGCACGCCAAGAGACTaGGGTGGGCACACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREESTPRD*GGHTGP
Trigger: GGGGCCAGTGTGCCCACCCCAGTCTCTTGGCGTGCT...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGCTAGAACCAAGTCCATaGCCATGCCCACGGCGATGC +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGLEPSP*PCPRRC
Trigger: GCATCGCCGTGGGCATGGCCATGGACTTGGTTCTAG...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp ACCCACATCAAGGCCATCCCCCTCATTAGCACCAATGGCCCCCAGGAGAGGGCCCTAGAACCAAGTCCATaGCCATGCCCACGGCGATGC +
Preference number: 4 (lower is better)
Translates to: THIKAIPLISTNGPQERALEPSP*PCPRRC
Trigger: GCATCGCCGTGGGCATGGCCATGGACTTGGTTCTAG...GGCCCTCTCCTGGGGGCCATTGGTGCTAATGAGGGGGATGGCCTTGATGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGCTGCCCTGGGCATTaGTGCTGCGATGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREEGCPGH*CCDGPL
Trigger: CAGAGGCCCATCGCAGCACCAATGCCCAGGGCAGCC...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGCGCCTCTGTTTCCAATaGCTGCCCTGGGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGRLCFQ*LPWALV
Trigger: CACCAATGCCCAGGGCAGCCATTGGAAACAGAGGCG...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGGCCTGGGAGAAGGTATaGCACTCCTTCTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGAWEKV*HSFSFP
Trigger: GGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGC...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp CTGGCATCCAGCATGAGAGGTAGATGGAACTCAGCGGGCACGAGTGGCAGAAAGGCCCTGTCCCAGGGCTaGAGGTCTGAGGAGGGACCT +
Preference number: 4 (lower is better)
Translates to: LASSMRGRWNSAGTSGRKALSQG*RSEEGP
Trigger: AGGTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGC...CTTTCTGCCACTCGTGCCCGCTGAGTTCCATCTACCTCTCATGCTGGATGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGGCCCTGTCCCAGGGCTaGAGGTCTGAGGAGGGACCT +
Preference number: 4 (lower is better)
Translates to: AVRVCVWELNLSKDERKEALSQG*RSEEGP
Trigger: AGGTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGC...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp ACCCACATCAAGGCCATCCCCCTCATTAGCACCAATGGCCCCCAGGAGAGGGCCGAGAGGATGGGGTCCTaGGAACTGCAGGACACAGCT +
Preference number: 4 (lower is better)
Translates to: THIKAIPLISTNGPQERAERMGS*ELQDTA
Trigger: AGCTGTGTCCTGCAGTTCCCAGGACCCCATCCTCTC...GGCCCTCTCCTGGGGGCCATTGGTGCTAATGAGGGGGATGGCCTTGATGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp AGACAGCAGACAGGTCAGGAATTCCACTGGGCCCCCAGGCGTGGTAGGAAGGTAAGGGGTGGAGGGTTCTaGGAGACGCTCACGCACAGC +
Preference number: 4 (lower is better)
Translates to: RQQTGQEFHWAPRRGRKVRGGGF*ETLTHS
Trigger: GCTGTGCGTGAGCGTCTCCCAGAACCCTCCACCCCT...TACCTTCCTACCACGCCTGGGGGCCCAGTGGAATTCCTGACCTGTCTGCTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp AGACGCTCACGCACAGCCCTCCTACCCCCGACCCAACCAATGCAGCAGCATCCGCCCACAACCCTCCCCTaGCCCTCTGATTTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: RRSRTALLPPTQPMQQHPPTTLP*PSDLFC
Trigger: ACAGAACAAATCAGAGGGCCAGGGGAGGGTTGTGGG...CGGATGCTGCTGCATTGGTTGGGTCGGGGGTAGGAGGGCTGTGCGTGAGCGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp GGCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTCGGCACAGCTGGCACTaGTTGCGGGTGATCTTGTCA +
Preference number: 4 (lower is better)
Translates to: GRGLGEGMALLLLPHRPSRHSWH*LRVILS
Trigger: TGACAAGATCACCCGCAATCAGTGCCAGCTGTGCCG...AGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGCATGGAGACAATGGGTaGCTGGCCAATGTCATCGGG +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGHGDNG*LANVIG
Trigger: CCCGATGACATTGGCCAGTCACCCATTGTCTCCATG...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGACCCCTTCAGGAGGATaGTCTGGTCTTCGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGTPSGG*SGLRKA
Trigger: TGCCTTGCGAAGACCAGATCATCCTCCTGAAGGGGT...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp CAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGGGTCCCGGGCTGTGTaGTGGGGGAGTAGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: QQKARESGHVWPAEEGKVGSRAV*WGSSFG
Trigger: TCCGAAGCTACTCCCCCAGCACACAGCCCGGGACCC...CACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GGGGGTGGCCAGGACCCTGTTGTGTTAACTCACAGCTCTGATCGGCAGCCCTACCGCCGCTCCCGGTTCTaGTCAATCAGCTTACGCTTG +
Preference number: 4 (lower is better)
Translates to: GGGQDPVVLTHSSDRQPYRRSRF*SISLRL
Trigger: CAAGCGTAAGCTGATTGAGCAGAACCGGGAGCGGCG...GTAGGGCTGCCGATCAGAGCTGTGAGTTAACACAACAGGGTCCTGGCCACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp GCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGCTCTGGTCGCTGCTaGAGTGATCGGATCATCTCC +
Preference number: 4 (lower is better)
Translates to: AEAWEKVWHSFSFPIGLLGSGRC*SDRIIS
Trigger: GGAGATGATCCGATCACTGCAGCAGCGACCAGAGCC...CAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGTGGGCTCTGGTCGCTaGTGCAGTGATCGGATCATC +
Preference number: 4 (lower is better)
Translates to: AEAWEKVWHSFSFPIGLLVGSGR*CSDRII
Trigger: GATGATCCGATCACTGCAGCAGCGACCAGAGCCCAC...CAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGCCTGGGCATTGGTGCTaGGATGGGCCTCTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRPGHWC*DGPLWQ
Trigger: TTGCCACAGAGGCCCATCGCAGCACCAATGCCCAGG...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGATGCCCTGGGCATTGGTaGTGCGATGGGCCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: GSAGVCVGAESIQGREEGCPGHW*CDGPLW
Trigger: CCACAGAGGCCCATCGCAGCACCAATGCCCAGGGCA...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGTGCCCTGGGCATTGGTaGTGCGATGGGCCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: AVRVCVWELNLSKDERKECPGHW*CDGPLW
Trigger: CCACAGAGGCCCATCGCAGCACCAATGCCCAGGGCA...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp ACCCACATCAAGGCCATCCCCCTCATTAGCACCAATGGCCCCCAGGAGAGGGCCTCTGTTTCCAATGGCTaGCCTGGGCATTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: THIKAIPLISTNGPQERASVSNG*PGHWCC
Trigger: GCAGCACCAATGCCCAGGGCAGCCATTGGAAACAGA...GGCCCTCTCCTGGGGGCCATTGGTGCTAATGAGGGGGATGGCCTTGATGTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp ACCCACATCAAGGCCATCCCCCTCATTAGCACCAATGGCCCCCAGGAGAGGGCCATTAGCAGCACAGCCTaGAGCAGAGCCACTTCCGTG +
Preference number: 4 (lower is better)
Translates to: THIKAIPLISTNGPQERAISSTA*SRATSV
Trigger: CACGGAAGTGGCTCTGCTGCAGGCTGTGCTGCTAAT...GGCCCTCTCCTGGGGGCCATTGGTGCTAATGAGGGGGATGGCCTTGATGTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGCCCGCTTCACCAAGCTaGTGCTCAAGCTGCCGGACC +
Preference number: 4 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLPASPS*CSSCRT
Trigger: GGTCCGGCAGCTTGAGCAGCAGCTTGGTGAAGCGGG...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR GCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGCTTTCAGGCACCTCCTaGTCTTGGGGCAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRLSGTS*SWGRGL
Trigger: CAGGCCTCTGCCCCAAGAGCAGGAGGTGCCTGAAAG...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGGGAGTACCTACTCTATaGCAGGCCCTGCACCGGGCA +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRGVPTL*QALHRA
Trigger: TGCCCGGTGCAGGGCCTGGCATAGAGTAGGTACTCC...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGACAGAGATCCCCCGCATaGGCAGAGCCACAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GSAGVCVGAESIQGREEGQRSPA*AEPQGS
Trigger: AGAGCCCTGTGGCTCTGCGCATGCGGGGGATCTCTG...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546243.5
CDS-3UTR CCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAATCCCGGGCTGTGTGCTaGGGGAGTAGCTTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREESRAVC*GSSFGV
Trigger: GACTCCGAAGCTACTCCCCCAGCACACAGCCCGGGA...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGTCCCGGGCTGTGTGCTaGGGGAGTAGCTTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLSRAVC*GSSFGV
Trigger: GACTCCGAAGCTACTCCCCCAGCACACAGCCCGGGA...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGGGCAAGCTGGGTTTGTaGGTCCCGGGCTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: AVRVCVWELNLSKDERKEGKLGL*VPGCVL
Trigger: CAGCACACAGCCCGGGACCCACAAACCCAGCTTGCC...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp AGGCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGGGGCTGGGGGCAAGCTaGGTTTGTGGGTCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: RQRELHSKKQGSLAMFGLGLGAS*VCGSRA
Trigger: AGCCCGGGACCCACAAACCCAGCTTGCCCCCAGCCC...CAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGGGGCTGGGGGCAAGCTaGGTTTGTGGGTCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRGLGAS*VCGSRA
Trigger: AGCCCGGGACCCACAAACCCAGCTTGCCCCCAGCCC...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTGGGCTGGGGGCAAGCTaGGTTTGTGGGTCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: VCVGAESIQGREEGEKGCGLGAS*VCGSRA
Trigger: AGCCCGGGACCCACAAACCCAGCTTGCCCCCAGCCC...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGGGCAGGTGGGAGGGCTaGGGGCAAGCTGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWGRWEG*GQAGFV
Trigger: CACAAACCCAGCTTGCCCCCAGCCCTCCCACCTGCC...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCAGCACGCCAAGAGACTaGGGTGGGCACACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: QKARESGHVWPAEEGKVVSTPRD*GGHTGP
Trigger: GGGGCCAGTGTGCCCACCCCAGTCTCTTGGCGTGCT...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCGGCTGCCCTGGGCATTaGTGCTGCGATGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QKARESGHVWPAEEGKVVGCPGH*CCDGPL
Trigger: CAGAGGCCCATCGCAGCACCAATGCCCAGGGCAGCC...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GGCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTTTCCAATGGCTGCCCTaGGCATTGGTGCTGCGATGG +
Preference number: 4 (lower is better)
Translates to: GRGLGEGMALLLLPHRPSFQWLP*ALVLRW
Trigger: CCATCGCAGCACCAATGCCCAGGGCAGCCATTGGAA...AGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GGCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTCGCCTCTGTTTCCAATaGCTGCCCTGGGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: GRGLGEGMALLLLPHRPSRLCFQ*LPWALV
Trigger: CACCAATGCCCAGGGCAGCCATTGGAAACAGAGGCG...AGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GGCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTTGTCTCCGTCCGGCATaGAGACAATGGGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: GRGLGEGMALLLLPHRPSCLRPA*RQWVTG
Trigger: GCCAGTCACCCATTGTCTCCATGCCGGACGGAGACA...AGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGTGCCCAGTTCAAAGATaGCGTCGGAGACTACGCCCA +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGCPVQR*RRRLRP
Trigger: TGGGCGTAGTCTCCGACGCCATCTTTGAACTGGGCA...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTGCTGTCCTTCCGGGTaGACGCCCAGTGACCCGCCC +
Preference number: 4 (lower is better)
Translates to: KKQGSLAMFGLLRKGRWSCCPSG*TPSDPP
Trigger: GGGCGGGTCACTGGGCGTCCACCCGGAAGGACAGCA...AGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000394121.8
CDS-3UTR CCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGCAGACCGCTCGGGCATaGAGAATTCCGCTTCGGTGG +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRQTARA*RIPLRW
Trigger: CCACCGAAGCGGAATTCTCCATGCCCGAGCGGTCTG...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGCTTGGGGCAGAGGCCTaGGAGAAGGTATGGCACTCC +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRLGAEA*EKVWHS
Trigger: GGAGTGCCATACCTTCTCCCAGGCCTCTGCCCCAAG...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGCTGAGGAAGGGAAGGTaGTCTTACGGGATGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGLRKGR*SYGMGG
Trigger: ACCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAG...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp CTGGCATCCAGCATGAGAGGTAGATGGAACTCAGCGGGCACGAGTGGCAGAAAGGCTCCGCACACCCTCTaGCCGCCTGAGGCTTTAGAC +
Preference number: 4 (lower is better)
Translates to: LASSMRGRWNSAGTSGRKAPHTL*PPEALD
Trigger: GTCTAAAGCCTCAGGCGGCCAGAGGGTGTGCGGAGC...CTTTCTGCCACTCGTGCCCGCTGAGTTCCATCTACCTCTCATGCTGGATGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGCTCCGCACACCCTCTaGCCGCCTGAGGCTTTAGAC +
Preference number: 4 (lower is better)
Translates to: GSAGVCVGAESIQGREEGAPHTL*PPEALD
Trigger: GTCTAAAGCCTCAGGCGGCCAGAGGGTGTGCGGAGC...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGGAGAGGCCCTCAGCCTaGAGGGGAGACCTAGGCCAA +
Preference number: 4 (lower is better)
Translates to: AVRVCVWELNLSKDERKEERPSA*RGDLGQ
Trigger: TTGGCCTAGGTCTCCCCTCCAGGCTGAGGGCCTCTC...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GAGAGAGAGAGGATAGAGACAAAGACAGCGCGGGCAGCCCGAGGCCCCAGCAGGAGCATGAGAGGTAGATaGAACTCAGCGGGCACGAGT +
Preference number: 4 (lower is better)
Translates to: ERERIETKTARAARGPSRSMRGR*NSAGTS
Trigger: ACTCGTGCCCGCTGAGTTCCATCTACCTCTCATGCT...CCTGCTGGGGCCTCGGGCTGCCCGCGCTGTCTTTGTCTCTATCCTCTCTCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp AGCACCCTCACCAGGAGGGCGAGAGGGGCTCAAGCCAAAGTCCCTGAATTAGAGACTCCTGAGTCGCCCTaGCTCCTCCCCTACCATGTG +
Preference number: 4 (lower is better)
Translates to: STLTRRARGAQAKVPELETPESP*LLPYHV
Trigger: CACATGGTAGGGGAGGAGCCAGGGCGACTCAGGAGT...CTCTAATTCAGGGACTTTGGCTTGAGCCCCTCTCGCCCTCCTGGTGAGGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGGGGCAATACTGAGATaGAGAGGCGGGTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GSAGVCVGAESIQGREEGGAILR*RGGWWG
Trigger: CCCCCACCACCCGCCTCTCCATCTCAGTATTGCCCC...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
3UTR CAA 72 bp AGCCCACATTCCTCCTTCCCCTACGGTCAAGGTGGCTaGTCCCTTCTCAATCCTCCCGCCCTTCCCCTACCT +
Preference number: 4 (lower is better)
Translates to: SPHSSFPYGQGG*SLLNPPALPLP
Trigger: AGGTAGGGGAAGGGCGGGAGGATTGAGAAGGGACAAGCCACCTTGACCGTAGGGGAAGGAGGAATGTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp GGCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTTCGCTTTCCATCTGGTaGCCTGGCACTGTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GRGLGEGMALLLLPHRPSSLSIW*PGTVLL
Trigger: GAGGAGAACAGTGCCAGGTCACCAGATGGAAAGCGA...AGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp GGGGGTGGCCAGGACCCTGTTGTGTTAACTCACAGCTCTGATCGGCAGCCCTACCATGGAGACAATGGGTaGCTGGCCAATGTCATCGGG +
Preference number: 4 (lower is better)
Translates to: GGGQDPVVLTHSSDRQPYHGDNG*LANVIG
Trigger: CCCGATGACATTGGCCAGTCACCCATTGTCTCCATG...GTAGGGCTGCCGATCAGAGCTGTGAGTTAACACAACAGGGTCCTGGCCACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp GGGGGTGGCCAGGACCCTGTTGTGTTAACTCACAGCTCTGATCGGCAGCCCTACACCCCTTCAGGAGGATaGTCTGGTCTTCGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: GGGQDPVVLTHSSDRQPYTPSGG*SGLRKA
Trigger: TGCCTTGCGAAGACCAGATCATCCTCCTGAAGGGGT...GTAGGGCTGCCGATCAGAGCTGTGAGTTAACACAACAGGGTCCTGGCCACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp GCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGAGCAGGTACGCCTCCTaGCTCTTCTCGATCTTGTCC +
Preference number: 4 (lower is better)
Translates to: AEAWEKVWHSFSFPIGLLSRYAS*LFSILS
Trigger: GGACAAGATCGAGAAGAGTCAGGAGGCGTACCTGCT...CAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp GGCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTTGTGTTTGCGGTGGTTaGCGTAGTGCTCGAACGCCA +
Preference number: 4 (lower is better)
Translates to: GRGLGEGMALLLLPHRPSCVCGG*RSARTP
Trigger: TGGCGTTCGAGCACTACGTCAACCACCGCAAACACA...AGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp AGACAGCAGACAGGTCAGGAATTCCACTGGGCCCCCAGGCGTGGTAGGAAGGTACACCCTCTGGCCGCCTaGGGCTTTAGACTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: RQQTGQEFHWAPRRGRKVHPLAA*GFRLPD
Trigger: ATCAGGAAGTCTAAAGCCTCAGGCGGCCAGAGGGTG...TACCTTCCTACCACGCCTGGGGGCCCAGTGGAATTCCTGACCTGTCTGCTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp CATAGCAAGTTCAGTTGTTTGCCCTGTCCCAGGGCTGGAGGTCTGAGGAGGGACTGCCGTGTCCATGGCTaGGAATGGGGATGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: HSKFSCLPCPRAGGLRRDCRVHG*EWGWRG
Trigger: ACCCCTCCATCCCCATTCTCAGCCATGGACACGGCA...GTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp CATAGCAAGTTCAGTTGTTTGCCCTGTCCCAGGGCTGGAGGTCTGAGGAGGGACTGGGAGGGGCAATACTaGGATGGAGAGGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: HSKFSCLPCPRAGGLRRDWEGQY*DGEAGG
Trigger: ACCACCCGCCTCTCCATCTCAGTATTGCCCCTCCCA...GTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGGGGTCCCGGGCTGTGTaGTGGGGGAGTAGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRGSRAV*WGSSFG
Trigger: TCCGAAGCTACTCCCCCAGCACACAGCCCGGGACCC...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GGCACTCCTGAGTCGCCCTGGCTCCTCCCCTACCATGTGTACTCACTCACACATCCAAGTCCATGGCCATaGCCACGGCGATGCACTTCT +
Preference number: 4 (lower is better)
Translates to: GTPESPWLLPYHVYSLTHPSPWP*PRRCTS
Trigger: AGAAGTGCATCGCCGTGGGCATGGCCATGGACTTGG...ATGTGTGAGTGAGTACACATGGTAGGGGAGGAGCCAGGGCGACTCAGGAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGCGCCGCTCCCGGTTCTaGTCAATCAGCTTACGCTTG +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRRRSRF*SISLRL
Trigger: CAAGCGTAAGCTGATTGAGCAGAACCGGGAGCGGCG...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGGGCTCTGGTCGCTGCTaGAGTGATCGGATCATCTCC +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRGSGRC*SDRIIS
Trigger: GGAGATGATCCGATCACTGCAGCAGCGACCAGAGCC...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGGTGGGCTCTGGTCGCTaGTGCAGTGATCGGATCATC +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRVGSGR*CSDRII
Trigger: GATGATCCGATCACTGCAGCAGCGACCAGAGCCCAC...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAACCTGGGCATTGGTGCTaGGATGGGCCTCTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREEPGHWC*DGPLWQ
Trigger: TTGCCACAGAGGCCCATCGCAGCACCAATGCCCAGG...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTGCCCTGGGCATTGGTaGTGCGATGGGCCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: QKARESGHVWPAEEGKVVCPGHW*CDGPLW
Trigger: CCACAGAGGCCCATCGCAGCACCAATGCCCAGGGCA...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGTCTGTTTCCAATGGCTaGCCTGGGCATTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: AEAWEKVWHSFSFPIGLLSVSNG*PGHWCC
Trigger: GCAGCACCAATGCCCAGGGCAGCCATTGGAAACAGA...CAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GAGAGAGAGAGGATAGAGACAAAGACAGCGCGGGCAGCCCGAGGCCCCAGCAGGAGGCAGAGAGTGACTTaGCCAGTTCAAAGATGGCGT +
Preference number: 4 (lower is better)
Translates to: ERERIETKTARAARGPSRRQRVT*PVQRWR
Trigger: ACGCCATCTTTGAACTGGGCAAGTCACTCTCTGCCT...CCTGCTGGGGCCTCGGGCTGCCCGCGCTGTCTTTGTCTCTATCCTCTCTCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp GCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGATTAGCAGCACAGCCTaGAGCAGAGCCACTTCCGTG +
Preference number: 4 (lower is better)
Translates to: AEAWEKVWHSFSFPIGLLISSTA*SRATSV
Trigger: CACGGAAGTGGCTCTGCTGCAGGCTGTGCTGCTAAT...CAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGTGCATTCCGAGAAGCTaGTGTCCTTCCGGGTGGACG +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRCIPRS*CPSGWT
Trigger: CGTCCACCCGGAAGGACAGCAGCTTCTCGGAATGCA...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000394121.8
CDS-3UTR GCA 90 bp CAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGCCCGCTTCACCAAGCTaGTGCTCAAGCTGCCGGACC +
Preference number: 4 (lower is better)
Translates to: QQKARESGHVWPAEEGKVPASPS*CSSCRT
Trigger: GGTCCGGCAGCTTGAGCAGCAGCTTGGTGAAGCGGG...CACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGGGGAGTCCGCCTCACTaGTGTCGTCTTCCCCACAGA +
Preference number: 4 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLGSPPH*CRLPHR
Trigger: TCTGTGGGGAAGACGACAGCAGTGAGGCGGACTCCC...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGAGGGAGAGGCTGCATTaGCTGCCAGGTCCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLRERLH*LPGPRR
Trigger: TCTGCGAGGACCTGGCAGGCAATGCAGCCTCTCCCT...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR GCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGACAGACAACTATTTCTaGCTGGGGGAGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGTDNYF*LGELGK
Trigger: CTTCCCCAGCTCCCCCAGGCAGAAATAGTTGTCTGT...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR GCA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGCTCTATGCCAGGCCCTaGACCGGGCACTGGGGATAC +
Preference number: 4 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWLYARP*TGHWGY
Trigger: GTATCCCCAGTGCCCGGTGCAGGGCCTGGCATAGAG...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR GCA 90 bp CATAGCAAGTTCAGTTGTTTGCCCTGTCCCAGGGCTGGAGGTCTGAGGAGGGACGGCAGGCCCCGATCATaGGGAGGTCAGTCACCTTCA +
Preference number: 4 (lower is better)
Translates to: HSKFSCLPCPRAGGLRRDGRPRS*GGQSPS
Trigger: TGAAGGTGACTGACCTCCGCATGATCGGGGCCTGCC...GTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTCCCGGGCTGTGTGCTaGGGGAGTAGCTTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: QKARESGHVWPAEEGKVVSRAVC*GSSFGV
Trigger: GACTCCGAAGCTACTCCCCCAGCACACAGCCCGGGA...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGGGCAAGCTGGGTTTGTaGGTCCCGGGCTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWGKLGL*VPGCVL
Trigger: CAGCACACAGCCCGGGACCCACAAACCCAGCTTGCC...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGGCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGGGCAGGTGGGAGGGCTaGGGGCAAGCTGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: RQRELHSKKQGSLAMFGLGRWEG*GQAGFV
Trigger: CACAAACCCAGCTTGCCCCCAGCCCTCCCACCTGCC...CAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGACAGCAGACAGGTCAGGAATTCCACTGGGCCCCCAGGCGTGGTAGGAAGGTAACCCGCCTCAGCACTTaGCCTTTCACACCATGCCCT +
Preference number: 4 (lower is better)
Translates to: RQQTGQEFHWAPRRGRKVTRLST*PFTPCP
Trigger: AGGGCATGGTGTGAAAGGCCAAGTGCTGAGGCGGGT...TACCTTCCTACCACGCCTGGGGGCCCAGTGGAATTCCTGACCTGTCTGCTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAGCACGCCAAGAGACTaGGGTGGGCACACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRSTPRD*GGHTGP
Trigger: GGGGCCAGTGTGCCCACCCCAGTCTCTTGGCGTGCT...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGTTCCATCTGGTGACCTaGCACTGTTCTCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGFHLVT*HCSPLG
Trigger: ACCCAGAGGAGAACAGTGCCAGGTCACCAGATGGAA...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGCAATCAGCTTACGCTTaGCCACCCGCTTCGAGTCAT +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGQSAYA*PPASSH
Trigger: ATGACTCGAAGCGGGTGGCCAAGCGTAAGCTGATTG...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGCCCACTCTTCAGGAGTaGGCTCTGGTCGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLPTLQE*ALVAAA
Trigger: TGCAGCAGCGACCAGAGCCCACTCCTGAAGAGTGGG...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR CCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGGCATTGGTGCTGCGATaGGCCTCTGTGGCAATGTGG +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRALVLR*ASVAMW
Trigger: CCACATTGCCACAGAGGCCCATCGCAGCACCAATGC...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp ATTTTAACCTCCAGAGGAGGAGCCAAGCCAAGCCGTTCTTTGCACCCAGGCATCGGCTGCCCTGGGCATTaGTGCTGCGATGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ILTSRGGAKPSRSLHPGIGCPGH*CCDGPL
Trigger: CAGAGGCCCATCGCAGCACCAATGCCCAGGGCAGCC...GATGCCTGGGTGCAAAGAACGGCTTGGCTTGGCTCCTCCTCTGGAGGTTAAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGGCTGCCCTGGGCATTaGTGCTGCGATGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: AEGTTQQKARESGHVWPAGCPGH*CCDGPL
Trigger: CAGAGGCCCATCGCAGCACCAATGCCCAGGGCAGCC...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GGCACTCCTGAGTCGCCCTGGCTCCTCCCCTACCATGTGTACTCACTCACACATCGCCTCTGTTTCCAATaGCTGCCCTGGGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: GTPESPWLLPYHVYSLTHRLCFQ*LPWALV
Trigger: CACCAATGCCCAGGGCAGCCATTGGAAACAGAGGCG...ATGTGTGAGTGAGTACACATGGTAGGGGAGGAGCCAGGGCGACTCAGGAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGCCGGCATGGAGACAATaGGTGACTGGCCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGPAWRQ*VTGQCH
Trigger: ATGACATTGGCCAGTCACCCATTGTCTCCATGCCGG...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGAGAATTCCGCTTCGGTaGAGCAGCTCCAGGAGACGC +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRRIPLR*SSSRRR
Trigger: GCGTCTCCTGGAGCTGCTCCACCGAAGCGGAATTCT...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGGCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGTCCCCATCGGCCTTCTaGGGGGCTTCAGGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RQRELHSKKQGSLAMFGLSPSAF*GASGRG
Trigger: GCCTCTCCCTGAAGCCCCCCAGAAGGCCGATGGGGA...CAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGACAGCAGACAGGTCAGGAATTCCACTGGGCCCCCAGGCGTGGTAGGAAGGTACCTAGGCCAAGGAACTaGGTGGGGGCTCTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: RQQTGQEFHWAPRRGRKVPRPRN*VGALSH
Trigger: ATGAGAGAGAGCCCCCACCCAGTTCCTTGGCCTAGG...TACCTTCCTACCACGCCTGGGGGCCCAGTGGAATTCCTGACCTGTCTGCTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAAGGGTCAGGGTGGGGTaGCAGGTTCCCCACTGCTTA +
Preference number: 4 (lower is better)
Translates to: GSAGVCVGAESIQGREEGRVRVG*QVPHCL
Trigger: TAAGCAGTGGGGAACCTGCCACCCCACCCTGACCCT...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp ATTTTAACCTCCAGAGGAGGAGCCAAGCCAAGCCGTTCTTTGCACCCAGGCATCGCCCCGGGCCAATACTaGGGGAGGCATGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: ILTSRGGAKPSRSLHPGIAPGQY*GRHAEH
Trigger: GTGCTCAGCATGCCTCCCCCAGTATTGGCCCGGGGC...GATGCCTGGGTGCAAAGAACGGCTTGGCTTGGCTCCTCCTCTGGAGGTTAAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCAGGGCACAGCACCCATaGTACCCGCCTCAGCACTTG +
Preference number: 4 (lower is better)
Translates to: QKARESGHVWPAEEGKVVRAQHP*YPPQHL
Trigger: CAAGTGCTGAGGCGGGTATCATGGGTGCTGTGCCCT...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGGTTCTCCTCTGGGTCTaGCCCACACTCCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLVLLWV*PTLHLA
Trigger: AGCAAGGTGGAGTGTGGGTCAGACCCAGAGGAGAAC...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR TCA 90 bp CATAGCAAGTTCAGTTGTTTGCCCTGTCCCAGGGCTGGAGGTCTGAGGAGGGACGTTCTCCTCTGGGTCTaGCCCACACTCCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: HSKFSCLPCPRAGGLRRDVLLWV*PTLHLA
Trigger: AGCAAGGTGGAGTGTGGGTCAGACCCAGAGGAGAAC...GTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR TCA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGCGGCACAGCTGGCACTaGTTGCGGGTGATCTTGTCA +
Preference number: 4 (lower is better)
Translates to: AVRVCVWELNLSKDERKERHSWH*LRVILS
Trigger: TGACAAGATCACCCGCAATCAGTGCCAGCTGTGCCG...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR TCA 90 bp CAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGTTCGGGCTCTGGTGCTaGAGAACCGGCCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: QQKARESGHVWPAEEGKVFGLWC*RTGPWR
Trigger: TCTCCAAGGGCCGGTTCTTCAGCACCAGAGCCCGAA...CACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTCGGGCTCTGGTGCTaGAGAACCGGCCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: QKARESGHVWPAEEGKVVFGLWC*RTGPWR
Trigger: TCTCCAAGGGCCGGTTCTTCAGCACCAGAGCCCGAA...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp CATAGCAAGTTCAGTTGTTTGCCCTGTCCCAGGGCTGGAGGTCTGAGGAGGGACCACCCTCTGGCCGCCTaGGGCTTTAGACTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: HSKFSCLPCPRAGGLRRDHPLAA*GFRLPD
Trigger: ATCAGGAAGTCTAAAGCCTCAGGCGGCCAGAGGGTG...GTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR TCA 90 bp ATAAATTTTAACCTCCAGAGGAGGAGCCAAGCCAAGCCGTTCTTTGCACCCAGGTCTCCCTCTCTCCCCTaGGGAGTGGGCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: INFNLQRRSQAKPFFAPRSPSLP*GVGGSH
Trigger: GTGGCTGCCGCCCACTCCTCAGGGGAGAGAGGGAGA...CCTGGGTGCAAAGAACGGCTTGGCTTGGCTCCTCCTCTGGAGGTTAAAATTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp GGCACTCCTGAGTCGCCCTGGCTCCTCCCCTACCATGTGTACTCACTCACACATCCCTGTTGGAACACCTaGACGATTGGGGAAGGACAG +
Preference number: 4 (lower is better)
Translates to: GTPESPWLLPYHVYSLTHPCWNT*TIGEGQ
Trigger: CTGTCCTTCCCCAATCGTTCAGGTGTTCCAACAGGG...ATGTGTGAGTGAGTACACATGGTAGGGGAGGAGCCAGGGCGACTCAGGAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTCTGGGGGAGGCATGCTaGGCACCCACATCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: VCVGAESIQGREEGEKGCLGEAC*APTSRP
Trigger: TGGCCTTGATGTGGGTGCTCAGCATGCCTCCCCCAG...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGCAATTCCATCCAGGATaGCCTCCAGCACGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRQFHPG*PPARQE
Trigger: CTCTTGGCGTGCTGGAGGGCATCCTGGATGGAATTG...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGACCCACACTCCACCTTaGTTGGCTTCTGTTCCATTC +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGTHTPP*LASVPF
Trigger: GAATGGAACAGAAGCCAAGCAAGGTGGAGTGTGGGT...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAACCAAGTCCATGGCCATaGCCACGGCGATGCACTTCT +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREEPSPWP*PRRCTS
Trigger: AGAAGTGCATCGCCGTGGGCATGGCCATGGACTTGG...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGCCAAGTCCATGGCCATaGCCACGGCGATGCACTTCT +
Preference number: 4 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLPSPWP*PRRCTS
Trigger: AGAAGTGCATCGCCGTGGGCATGGCCATGGACTTGG...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGCGCCGCTCCCGGTTCTaGTCAATCAGCTTACGCTTG +
Preference number: 4 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLRRSRF*SISLRL
Trigger: CAAGCGTAAGCTGATTGAGCAGAACCGGGAGCGGCG...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR GCA 90 bp CTGGCATCCAGCATGAGAGGTAGATGGAACTCAGCGGGCACGAGTGGCAGAAAGGGCTCTGGTCGCTGCTaGAGTGATCGGATCATCTCC +
Preference number: 4 (lower is better)
Translates to: LASSMRGRWNSAGTSGRKGSGRC*SDRIIS
Trigger: GGAGATGATCCGATCACTGCAGCAGCGACCAGAGCC...CTTTCTGCCACTCGTGCCCGCTGAGTTCCATCTACCTCTCATGCTGGATGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGGCTCTGGTCGCTGCTaGAGTGATCGGATCATCTCC +
Preference number: 4 (lower is better)
Translates to: GSAGVCVGAESIQGREEGGSGRC*SDRIIS
Trigger: GGAGATGATCCGATCACTGCAGCAGCGACCAGAGCC...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp CAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGCCTGGGCATTGGTGCTaGGATGGGCCTCTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: QQKARESGHVWPAEEGKVPGHWC*DGPLWQ
Trigger: TTGCCACAGAGGCCCATCGCAGCACCAATGCCCAGG...CACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAACCGCCATTCTTGAGCTaGTCCCGCTTGACAGCCATC +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREEPPFLS*SRLTAI
Trigger: GATGGCTGTCAAGCGGGAGCAGCTCAAGAATGGCGG...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGCCGCCATTCTTGAGCTaGTCCCGCTTGACAGCCATC +
Preference number: 4 (lower is better)
Translates to: AVRVCVWELNLSKDERKEPPFLS*SRLTAI
Trigger: GATGGCTGTCAAGCGGGAGCAGCTCAAGAATGGCGG...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGCCGCCATTCTTGAGCTaGTCCCGCTTGACAGCCATC +
Preference number: 4 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLPPFLS*SRLTAI
Trigger: GATGGCTGTCAAGCGGGAGCAGCTCAAGAATGGCGG...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR GCA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGCCGGCCTTCTGCCGCTaGCCCCTTGTACAGAATCGA +
Preference number: 4 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWPAFCR*PLVQNR
Trigger: TCGATTCTGTACAAGGGGGCAGCGGCAGAAGGCCGG...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000394121.8
CDS-3UTR GCA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGTGCATTCCGAGAAGCTaGTGTCCTTCCGGGTGGACG +
Preference number: 4 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLCIPRS*CPSGWT
Trigger: CGTCCACCCGGAAGGACAGCAGCTTCTCGGAATGCA...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264637.8
CDS-3UTR GCA 90 bp CAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGGGAGTCCGCCTCACTaGTGTCGTCTTCCCCACAGA +
Preference number: 4 (lower is better)
Translates to: QQKARESGHVWPAEEGKVGSPPH*CRLPHR
Trigger: TCTGTGGGGAAGACGACAGCAGTGAGGCGGACTCCC...CACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCAGAGGCTGCATTGCCTaGCAGGTCCTCGCAGACCTC +
Preference number: 4 (lower is better)
Translates to: QKARESGHVWPAEEGKVVRGCIA*QVLADL
Trigger: GAGGTCTGCGAGGACCTGGCAGGCAATGCAGCCTCT...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp CAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGAGGGAGAGGCTGCATTaGCTGCCAGGTCCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: QQKARESGHVWPAEEGKVRERLH*LPGPRR
Trigger: TCTGCGAGGACCTGGCAGGCAATGCAGCCTCTCCCT...CACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTCTCTATGCCAGGCCCTaGACCGGGCACTGGGGATAC +
Preference number: 4 (lower is better)
Translates to: AEGTTQQKARESGHVWPALYARP*TGHWGY
Trigger: GTATCCCCAGTGCCCGGTGCAGGGCCTGGCATAGAG...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR GCA 90 bp CAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGTCCTCAAGCTTCAGCTaGGAGGGCTGGGCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: QQKARESGHVWPAEEGKVSSSFS*EGWAGD
Trigger: GTCACCTGCCCAGCCCTCGCAGCTGAAGCTTGAGGA...CACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394121.8
CDS-3UTR GCA 90 bp GGGGGTGGCCAGGACCCTGTTGTGTTAACTCACAGCTCTGATCGGCAGCCCTACTTTTTCCTGGGTGGGTaGCAAGGTGTGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GGGQDPVVLTHSSDRQPYFFLGG*QGVEGG
Trigger: TCCTCCTTCCACACCTTGGCACCCACCCAGGAAAAA...GTAGGGCTGCCGATCAGAGCTGTGAGTTAACACAACAGGGTCCTGGCCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGACCCCATTCTGGTACCTaGCCGCCCAGAGTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: GSAGVCVGAESIQGREEGPHSGT*PPRVSA
Trigger: TGCACTAACTCTGGGCGGGCAGGTACCAGAATGGGG...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp CTGGCATCCAGCATGAGAGGTAGATGGAACTCAGCGGGCACGAGTGGCAGAAAGATTGGGGAAGGACAGTaGCCTGACGGGCAGCATAGC +
Preference number: 4 (lower is better)
Translates to: LASSMRGRWNSAGTSGRKIGEGQ*PDGQHS
Trigger: GCTATGCTGCCCGTCAGGGCACTGTCCTTCCCCAAT...CTTTCTGCCACTCGTGCCCGCTGAGTTCCATCTACCTCTCATGCTGGATGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTTCCCGGGCTGTGTGCTaGGGGAGTAGCTTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: VCVGAESIQGREEGEKGCSRAVC*GSSFGV
Trigger: GACTCCGAAGCTACTCCCCCAGCACACAGCCCGGGA...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp AAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTGGCAAGCTGGGTTTGTaGGTCCCGGGCTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: KKQGSLAMFGLLRKGRWSGKLGL*VPGCVL
Trigger: CAGCACACAGCCCGGGACCCACAAACCCAGCTTGCC...AGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAACCCGCCTCAGCACTTaGCCTTTCACACCATGCCCT +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREETRLST*PFTPCP
Trigger: AGGGCATGGTGTGAAAGGCCAAGTGCTGAGGCGGGT...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGACCCGCCTCAGCACTTaGCCTTTCACACCATGCCCT +
Preference number: 4 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLTRLST*PFTPCP
Trigger: AGGGCATGGTGTGAAAGGCCAAGTGCTGAGGCGGGT...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGTTCCATCTGGTGACCTaGCACTGTTCTCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: AEAWEKVWHSFSFPIGLLFHLVT*HCSPLG
Trigger: ACCCAGAGGAGAACAGTGCCAGGTCACCAGATGGAA...CAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp CAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGCCCACTCTTCAGGAGTaGGCTCTGGTCGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: QQKARESGHVWPAEEGKVPTLQE*ALVAAA
Trigger: TGCAGCAGCGACCAGAGCCCACTCCTGAAGAGTGGG...CACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGTGCGATGGGCCTCTGTaGCAATGTGGATCAGATCCC +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRCDGPL*QCGSDP
Trigger: GGGATCTGATCCACATTGCCACAGAGGCCCATCGCA...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGGCATTGGTGCTGCGATaGGCCTCTGTGGCAATGTGG +
Preference number: 4 (lower is better)
Translates to: AVRVCVWELNLSKDERKEALVLR*ASVAMW
Trigger: CCACATTGCCACAGAGGCCCATCGCAGCACCAATGC...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAACGCCTCTGTTTCCAATaGCTGCCCTGGGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREERLCFQ*LPWALV
Trigger: CACCAATGCCCAGGGCAGCCATTGGAAACAGAGGCG...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp GGCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTCCGGCATGGAGACAATaGGTGACTGGCCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: GRGLGEGMALLLLPHRPSPAWRQ*VTGQCH
Trigger: ATGACATTGGCCAGTCACCCATTGTCTCCATGCCGG...AGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp CTGGCATCCAGCATGAGAGGTAGATGGAACTCAGCGGGCACGAGTGGCAGAAAGTGTCTCCGTCCGGCATaGAGACAATGGGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: LASSMRGRWNSAGTSGRKCLRPA*RQWVTG
Trigger: GCCAGTCACCCATTGTCTCCATGCCGGACGGAGACA...CTTTCTGCCACTCGTGCCCGCTGAGTTCCATCTACCTCTCATGCTGGATGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GGCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTCCTTCATCAGCAGCTTaGGCCAGAAGTGCGGAATGT +
Preference number: 4 (lower is better)
Translates to: GRGLGEGMALLLLPHRPSPSSAA*ARSAEC
Trigger: ACATTCCGCACTTCTGGCCCAAGCTGCTGATGAAGG...AGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp CAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGGTGGTCTTACGGGATaGGAGGTGACCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: QQKARESGHVWPAEEGKVGGLTG*EVTSPA
Trigger: AGCAGGGCTGGTCACCTCCCATCCCGTAAGACCACC...CACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp CATAGCAAGTTCAGTTGTTTGCCCTGTCCCAGGGCTGGAGGTCTGAGGAGGGACGAGAGGATGGGGTCCTaGGAACTGCAGGACACAGCT +
Preference number: 4 (lower is better)
Translates to: HSKFSCLPCPRAGGLRRDERMGS*ELQDTA
Trigger: AGCTGTGTCCTGCAGTTCCCAGGACCCCATCCTCTC...GTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp AGACAGCAGACAGGTCAGGAATTCCACTGGGCCCCCAGGCGTGGTAGGAAGGTACCCCTACGGTCAAGGTaGCTTGTCCCTTCTCAATCC +
Preference number: 4 (lower is better)
Translates to: RQQTGQEFHWAPRRGRKVPLRSR*LVPSQS
Trigger: GGATTGAGAAGGGACAAGCCACCTTGACCGTAGGGG...TACCTTCCTACCACGCCTGGGGGCCCAGTGGAATTCCTGACCTGTCTGCTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGGCCAAGGAACTGGGTaGGGGCTCTCTCTCATGTGT +
Preference number: 4 (lower is better)
Translates to: GSAGVCVGAESIQGREEGGQGTG*GLSLMC
Trigger: ACACATGAGAGAGAGCCCCCACCCAGTTCCTTGGCC...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp AGCACCCTCACCAGGAGGGCGAGAGGGGCTCAAGCCAAAGTCCCTGAATTAGAGTCTCTGCCGTGTCCATaGCTGAGAATGGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: STLTRRARGAQAKVPELESLPCP*LRMGME
Trigger: CTCCATCCCCATTCTCAGCCATGGACACGGCAGAGA...CTCTAATTCAGGGACTTTGGCTTGAGCCCCTCTCGCCCTCCTGGTGAGGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGCACAGCTCATATGATTaGGGAGGGTGGGGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: AVRVCVWELNLSKDERKEHSSYD*GGWGSP
Trigger: GGGACTCCCCCACCCTCCCCAATCATATGAGCTGTG...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGTTCCACAGCAGGGACTaGGACAGCTGCCGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: AVRVCVWELNLSKDERKEFHSRD*DSCRSR
Trigger: TCTAGAGCGGCAGCTGTCCCAGTCCCTGCTGTGGAA...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp CATAGCAAGTTCAGTTGTTTGCCCTGTCCCAGGGCTGGAGGTCTGAGGAGGGACTCGCTTTCCATCTGGTaGCCTGGCACTGTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: HSKFSCLPCPRAGGLRRDSLSIW*PGTVLL
Trigger: GAGGAGAACAGTGCCAGGTCACCAGATGGAAAGCGA...GTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR TCA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCCGGCACAGCTGGCACTaGTTGCGGGTGATCTTGTCA +
Preference number: 4 (lower is better)
Translates to: QKARESGHVWPAEEGKVVRHSWH*LRVILS
Trigger: TGACAAGATCACCCGCAATCAGTGCCAGCTGTGCCG...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTCGGCGATGCACTTCTTaGAGCGGCACAGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: AEGTTQQKARESGHVWPARRCTS*SGTAGT
Trigger: AGTGCCAGCTGTGCCGCTTCAAGAAGTGCATCGCCG...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTCGGCGATGCACTTCTTaGAGCGGCACAGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: VCVGAESIQGREEGEKGCRRCTS*SGTAGT
Trigger: AGTGCCAGCTGTGCCGCTTCAAGAAGTGCATCGCCG...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR TCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAATGGTCGCTGCTGCAGTaGTCGGATCATCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREEWSLLQ*SDHLLL
Trigger: AAGGAGGAGATGATCCGATCACTGCAGCAGCGACCA...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR TCA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGTGGTCGCTGCTGCAGTaGTCGGATCATCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLWSLLQ*SDHLLL
Trigger: AAGGAGGAGATGATCCGATCACTGCAGCAGCGACCA...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR TCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAACATGGAGACAATGGGTaGCTGGCCAATGTCATCGGG +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREEHGDNG*LANVIG
Trigger: CCCGATGACATTGGCCAGTCACCCATTGTCTCCATG...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR TCA 90 bp CATAGCAAGTTCAGTTGTTTGCCCTGTCCCAGGGCTGGAGGTCTGAGGAGGGACACCCCTTCAGGAGGATaGTCTGGTCTTCGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: HSKFSCLPCPRAGGLRRDTPSGG*SGLRKA
Trigger: TGCCTTGCGAAGACCAGATCATCCTCCTGAAGGGGT...GTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR TCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAAGCAGGTACGCCTCCTaGCTCTTCTCGATCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREESRYAS*LFSILS
Trigger: GGACAAGATCGAGAAGAGTCAGGAGGCGTACCTGCT...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR TCA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGCAGGTACGCCTCCTaGCTCTTCTCGATCTTGTCC +
Preference number: 4 (lower is better)
Translates to: AVRVCVWELNLSKDERKESRYAS*LFSILS
Trigger: GGACAAGATCGAGAAGAGTCAGGAGGCGTACCTGCT...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR TCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAATGTGTTTGCGGTGGTTaGCGTAGTGCTCGAACGCCA +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREECVCGG*RSARTP
Trigger: TGGCGTTCGAGCACTACGTCAACCACCGCAAACACA...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR TCA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGTGTGTTTGCGGTGGTTaGCGTAGTGCTCGAACGCCA +
Preference number: 4 (lower is better)
Translates to: AVRVCVWELNLSKDERKECVCGG*RSARTP
Trigger: TGGCGTTCGAGCACTACGTCAACCACCGCAAACACA...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR TCA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCCGGACCTGCGGACCCTaGACAACATGCATTCCGAGA +
Preference number: 4 (lower is better)
Translates to: QKARESGHVWPAEEGKVVRTCGP*TTCIPR
Trigger: TCTCGGAATGCATGTTGTTCAGGGTCCGCAGGTCCG...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000394121.8
CDS-3UTR TCA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTTTCGGGCTCTGGTGCTaGAGAACCGGCCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: AEGTTQQKARESGHVWPAFGLWC*RTGPWR
Trigger: TCTCCAAGGGCCGGTTCTTCAGCACCAGAGCCCGAA...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAGCTGGGGAAGGAGGTaGCACTTGAGTTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRSWGRR*HLSWGL
Trigger: GAGGCCCCAACTCAAGTGTCACCTCCTTCCCCAGCT...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGCAATTCCATCCAGGATaGCCTCCAGCACGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: AVRVCVWELNLSKDERKEQFHPG*PPARQE
Trigger: CTCTTGGCGTGCTGGAGGGCATCCTGGATGGAATTG...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAACAATTCCATCCAGGATaGCCTCCAGCACGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREEQFHPG*PPARQE
Trigger: CTCTTGGCGTGCTGGAGGGCATCCTGGATGGAATTG...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp CAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGCGCCGCTCCCGGTTCTaGTCAATCAGCTTACGCTTG +
Preference number: 4 (lower is better)
Translates to: QQKARESGHVWPAEEGKVRRSRF*SISLRL
Trigger: CAAGCGTAAGCTGATTGAGCAGAACCGGGAGCGGCG...CACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAATTAGCAGCACAGCCTaGAGCAGAGCCACTTCCGTG +
Preference number: 4 (lower is better)
Translates to: GSAGVCVGAESIQGREEGISSTA*SRATSV
Trigger: CACGGAAGTGGCTCTGCTGCAGGCTGTGCTGCTAAT...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp AAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTAGGGAGAGGCTGCATTaGCTGCCAGGTCCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: KKQGSLAMFGLLRKGRWSRERLH*LPGPRR
Trigger: TCTGCGAGGACCTGGCAGGCAATGCAGCCTCTCCCT...AGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGACAGACAACTATTTCTaGCTGGGGGAGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRTDNYF*LGELGK
Trigger: CTTCCCCAGCTCCCCCAGGCAGAAATAGTTGTCTGT...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR GCA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGGGAGTACCTACTCTATaGCAGGCCCTGCACCGGGCA +
Preference number: 4 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRGVPTL*QALHRA
Trigger: TGCCCGGTGCAGGGCCTGGCATAGAGTAGGTACTCC...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR GCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGCAAGTTCAGTTGTTTaGCCTGTCCCAGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREEASSVV*PVPGLE
Trigger: CTCCAGCCCTGGGACAGGGCAAACAACTGAACTTGC...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp GCACATAACAGACATACTGATTGTCAACGTGGGGCAGGAGTAGGAGCCCCTCAACACCGATACTGCACCTaGTGCTCCACCCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: AHNRHTDCQRGAGVGAPQHRYCT*CSTLPA
Trigger: GGCAGGCAGGGTGGAGCAGCAGGTGCAGTATCGGTG...TTGAGGGGCTCCTACTCCTGCCCCACGTTGACAATCAGTATGTCTGTTATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp AAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTCAAGCTGCCGGACCTaGGGACCCTTCATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KKQGSLAMFGLLRKGRWSSSCRT*GPFISS
Trigger: GCTGCTGATGAAGGGTCCGCAGGTCCGGCAGCTTGA...AGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584985.5
CDS-3UTR CCA 90 bp CAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGACCCGCCTCAGCACTTaGCCTTTCACACCATGCCCT +
Preference number: 4 (lower is better)
Translates to: QQKARESGHVWPAEEGKVTRLST*PFTPCP
Trigger: AGGGCATGGTGTGAAAGGCCAAGTGCTGAGGCGGGT...CACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGCAATCAGCTTACGCTTaGCCACCCGCTTCGAGTCAT +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRQSAYA*PPASSH
Trigger: ATGACTCGAAGCGGGTGGCCAAGCGTAAGCTGATTG...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTCCCACTCTTCAGGAGTaGGCTCTGGTCGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: VCVGAESIQGREEGEKGCPTLQE*ALVAAA
Trigger: TGCAGCAGCGACCAGAGCCCACTCCTGAAGAGTGGG...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTCCCACTCTTCAGGAGTaGGCTCTGGTCGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: AEGTTQQKARESGHVWPAPTLQE*ALVAAA
Trigger: TGCAGCAGCGACCAGAGCCCACTCCTGAAGAGTGGG...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGCCTCTGTGGCAATGTaGATCAGATCCCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: AEAWEKVWHSFSFPIGLLASVAM*IRSHSS
Trigger: TGAAGAGTGGGATCTGATCCACATTGCCACAGAGGC...CAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGTGCGATGGGCCTCTGTaGCAATGTGGATCAGATCCC +
Preference number: 4 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLCDGPL*QCGSDP
Trigger: GGGATCTGATCCACATTGCCACAGAGGCCCATCGCA...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR CCA 90 bp CAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGCATTGGTGCTGCGATaGGCCTCTGTGGCAATGTGG +
Preference number: 4 (lower is better)
Translates to: QQKARESGHVWPAEEGKVALVLR*ASVAMW
Trigger: CCACATTGCCACAGAGGCCCATCGCAGCACCAATGC...CACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTGTCTCCGTCCGGCATaGAGACAATGGGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWCLRPA*RQWVTG
Trigger: GCCAGTCACCCATTGTCTCCATGCCGGACGGAGACA...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGTGCCCAGTTCAAAGATaGCGTCGGAGACTACGCCCA +
Preference number: 4 (lower is better)
Translates to: AVRVCVWELNLSKDERKECPVQR*RRRLRP
Trigger: TGGGCGTAGTCTCCGACGCCATCTTTGAACTGGGCA...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAATGCCCAGTTCAAAGATaGCGTCGGAGACTACGCCCA +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREECPVQR*RRRLRP
Trigger: TGGGCGTAGTCTCCGACGCCATCTTTGAACTGGGCA...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp CAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGAGAATTCCGCTTCGGTaGAGCAGCTCCAGGAGACGC +
Preference number: 4 (lower is better)
Translates to: QQKARESGHVWPAEEGKVRIPLR*SSSRRR
Trigger: GCGTCTCCTGGAGCTGCTCCACCGAAGCGGAATTCT...CACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGGCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCAGACCGCTCGGGCATaGAGAATTCCGCTTCGGTGG +
Preference number: 4 (lower is better)
Translates to: RQRELHSKKQGSLAMFGLQTARA*RIPLRW
Trigger: CCACCGAAGCGGAATTCTCCATGCCCGAGCGGTCTG...CAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCGCCTGGGAGAAGGTATaGCACTCCTTCTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: QKARESGHVWPAEEGKVVAWEKV*HSFSFP
Trigger: GGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGC...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTCTTGGGGCAGAGGCCTaGGAGAAGGTATGGCACTCC +
Preference number: 4 (lower is better)
Translates to: KKQGSLAMFGLLRKGRWSLGAEA*EKVWHS
Trigger: GGAGTGCCATACCTTCTCCCAGGCCTCTGCCCCAAG...AGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGCTTGGGGCAGAGGCCTaGGAGAAGGTATGGCACTCC +
Preference number: 4 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRLGAEA*EKVWHS
Trigger: GGAGTGCCATACCTTCTCCCAGGCCTCTGCCCCAAG...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGGCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGGGTGGTCTTACGGGATaGGAGGTGACCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: RQRELHSKKQGSLAMFGLGGLTG*EVTSPA
Trigger: AGCAGGGCTGGTCACCTCCCATCCCGTAAGACCACC...CAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTGACCTCGAGGAAGAGTaGGGGGAAGAGTTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: VCVGAESIQGREEGEKGCDLEEE*GEEFGG
Trigger: CCCACCGAACTCTTCCCCCCACTCTTCCTCGAGGTC...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp GGCACTCCTGAGTCGCCCTGGCTCCTCCCCTACCATGTGTACTCACTCACACATGTGCGGGTGTGTGTGTaGGAGCTGAATCTATCCAAG +
Preference number: 4 (lower is better)
Translates to: GTPESPWLLPYHVYSLTHVRVCV*ELNLSK
Trigger: CTTGGATAGATTCAGCTCCCACACACACACCCGCAC...ATGTGTGAGTGAGTACACATGGTAGGGGAGGAGCCAGGGCGACTCAGGAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp CATAGCAAGTTCAGTTGTTTGCCCTGTCCCAGGGCTGGAGGTCTGAGGAGGGACGGGGGTCCTCCCCTCTaGTCAGCCTCAGTTAATAAC +
Preference number: 4 (lower is better)
Translates to: HSKFSCLPCPRAGGLRRDGGPPL*SASVNN
Trigger: GTTATTAACTGAGGCTGACCAGAGGGGAGGACCCCC...GTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGCTCAGCGGGCACGAGTaGCAGAAAGCAGAGGACATA +
Preference number: 4 (lower is better)
Translates to: AVRVCVWELNLSKDERKELSGHE*QKAEDI
Trigger: TATGTCCTCTGCTTTCTGCCACTCGTGCCCGCTGAG...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAATATGATTGGGGAGGGTaGGGGAGTCCCAAGTGCCTA +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREEYDWGG*GSPKCL
Trigger: TAGGCACTTGGGACTCCCCCACCCTCCCCAATCATA...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGGGGGTCCGGGGAGGATaGGATCACAGCTCATATGAT +
Preference number: 4 (lower is better)
Translates to: AVRVCVWELNLSKDERKEGVRGG*DHSSYD
Trigger: ATCATATGAGCTGTGATCCCATCCTCCCCGGACCCC...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp ATAAATTTTAACCTCCAGAGGAGGAGCCAAGCCAAGCCGTTCTTTGCACCCAGGGGCAACCCCTTGTCCTaGCCTGGCCCCCTCGTCCTA +
Preference number: 4 (lower is better)
Translates to: INFNLQRRSQAKPFFAPRGNPLS*PGPLVL
Trigger: TAGGACGAGGGGGCCAGGCCAGGACAAGGGGTTGCC...CCTGGGTGCAAAGAACGGCTTGGCTTGGCTCCTCCTCTGGAGGTTAAAATTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp ATAAATTTTAACCTCCAGAGGAGGAGCCAAGCCAAGCCGTTCTTTGCACCCAGGTGGAGAGGCGGGTGGTaGGGGCGGGGTAGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: INFNLQRRSQAKPFFAPRWRGGW*GRGSGH
Trigger: ATGACCACTACCCCGCCCCCACCACCCGCCTCTCCA...CCTGGGTGCAAAGAACGGCTTGGCTTGGCTCCTCCTCTGGAGGTTAAAATTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGGTCAGTTTGTGGGGTaGGTACTCTGCCAGCAGATG +
Preference number: 4 (lower is better)
Translates to: GSAGVCVGAESIQGREEGGQFVG*VLCQQM
Trigger: CATCTGCTGGCAGAGTACCCACCCCACAAACTGACC...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAAGAGCCACAGGGCTCTaGGTACCGTTCCAGGAGATA +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREERATGL*VPFQEI
Trigger: TATCTCCTGGAACGGTACCCAGAGCCCTGTGGCTCT...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546243.5
CDS-3UTR TCA 90 bp AGGCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGGTTCTCCTCTGGGTCTaGCCCACACTCCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: RQRELHSKKQGSLAMFGLVLLWV*PTLHLA
Trigger: AGCAAGGTGGAGTGTGGGTCAGACCCAGAGGAGAAC...CAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGGTTCTCCTCTGGGTCTaGCCCACACTCCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRVLLWV*PTLHLA
Trigger: AGCAAGGTGGAGTGTGGGTCAGACCCAGAGGAGAAC...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCGCTTTCCATCTGGTaGCCTGGCACTGTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWSLSIW*PGTVLL
Trigger: GAGGAGAACAGTGCCAGGTCACCAGATGGAAAGCGA...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTCGCTTTCCATCTGGTaGCCTGGCACTGTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: QKARESGHVWPAEEGKVVSLSIW*PGTVLL
Trigger: GAGGAGAACAGTGCCAGGTCACCAGATGGAAAGCGA...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTCGGCACAGCTGGCACTaGTTGCGGGTGATCTTGTCA +
Preference number: 4 (lower is better)
Translates to: VCVGAESIQGREEGEKGCRHSWH*LRVILS
Trigger: TGACAAGATCACCCGCAATCAGTGCCAGCTGTGCCG...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR TCA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTGGTCGCTGCTGCAGTaGTCGGATCATCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: QKARESGHVWPAEEGKVVWSLLQ*SDHLLL
Trigger: AAGGAGGAGATGATCCGATCACTGCAGCAGCGACCA...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGGTTAAAGGCAGAGAGTaGCTTGCCCAGTTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGVKGRE*LAQFKD
Trigger: ATCTTTGAACTGGGCAAGTCACTCTCTGCCTTTAAC...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCAGCAGGTACGCCTCCTaGCTCTTCTCGATCTTGTCC +
Preference number: 4 (lower is better)
Translates to: QKARESGHVWPAEEGKVVSRYAS*LFSILS
Trigger: GGACAAGATCGAGAAGAGTCAGGAGGCGTACCTGCT...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTGTGTTTGCGGTGGTTaGCGTAGTGCTCGAACGCCA +
Preference number: 4 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWCVCGG*RSARTP
Trigger: TGGCGTTCGAGCACTACGTCAACCACCGCAAACACA...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGCCATGTTTGGCCTGCTaGGGAAGGGAAGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWPCLAC*GREGGL
Trigger: AAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGG...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAAGCTGGCATCCAGCATaGGAGGTAGATGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: GSAGVCVGAESIQGREEGSWHPA*EVDGTQ
Trigger: CTGAGTTCCATCTACCTCTCATGCTGGATGCCAGCT...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp GAGAGAGAGAGGATAGAGACAAAGACAGCGCGGGCAGCCCGAGGCCCCAGCAGGTCAAGCCAAAGTCCCTaGATTAGAGAAAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: ERERIETKTARAARGPSRSSQSP*IREKKR
Trigger: CCTCTTCTTTTCTCTAATTCAGGGACTTTGGCTTGA...CCTGCTGGGGCCTCGGGCTGCCCGCGCTGTCTTTGTCTCTATCCTCTCTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp CATAGCAAGTTCAGTTGTTTGCCCTGTCCCAGGGCTGGAGGTCTGAGGAGGGACCCAATAGTTCACAGCTaGGCTGGCTTCTGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: HSKFSCLPCPRAGGLRRDPIVHS*AGFCGV
Trigger: CACACCACAGAAGCCAGCTCAGCTGTGAACTATTGG...GTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGACCCACACTCCACCTTaGTTGGCTTCTGTTCCATTC +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRTHTPP*LASVPF
Trigger: GAATGGAACAGAAGCCAAGCAAGGTGGAGTGTGGGT...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp AGCACCCTCACCAGGAGGGCGAGAGGGGCTCAAGCCAAAGTCCCTGAATTAGAGACCCACACTCCACCTTaGTTGGCTTCTGTTCCATTC +
Preference number: 4 (lower is better)
Translates to: STLTRRARGAQAKVPELETHTPP*LASVPF
Trigger: GAATGGAACAGAAGCCAAGCAAGGTGGAGTGTGGGT...CTCTAATTCAGGGACTTTGGCTTGAGCCCCTCTCGCCCTCCTGGTGAGGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp GGCACTCCTGAGTCGCCCTGGCTCCTCCCCTACCATGTGTACTCACTCACACATGTAGTGATAACCAGTTaGCTTGTCCCCACACACGAC +
Preference number: 4 (lower is better)
Translates to: GTPESPWLLPYHVYSLTHVVITS*LVPTHD
Trigger: GTCGTGTGTGGGGACAAGGCAACTGGTTATCACTAC...ATGTGTGAGTGAGTACACATGGTAGGGGAGGAGCCAGGGCGACTCAGGAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp AAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTCCAAGTCCATGGCCATaGCCACGGCGATGCACTTCT +
Preference number: 4 (lower is better)
Translates to: KKQGSLAMFGLLRKGRWSPSPWP*PRRCTS
Trigger: AGAAGTGCATCGCCGTGGGCATGGCCATGGACTTGG...AGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTCGCCGCTCCCGGTTCTaGTCAATCAGCTTACGCTTG +
Preference number: 4 (lower is better)
Translates to: VCVGAESIQGREEGEKGCRRSRF*SISLRL
Trigger: CAAGCGTAAGCTGATTGAGCAGAACCGGGAGCGGCG...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGGGCTCTGGTCGCTGCTaGAGTGATCGGATCATCTCC +
Preference number: 4 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRGSGRC*SDRIIS
Trigger: GGAGATGATCCGATCACTGCAGCAGCGACCAGAGCC...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp AGGCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGGTGGGCTCTGGTCGCTaGTGCAGTGATCGGATCATC +
Preference number: 4 (lower is better)
Translates to: RQRELHSKKQGSLAMFGLVGSGR*CSDRII
Trigger: GATGATCCGATCACTGCAGCAGCGACCAGAGCCCAC...CAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTGTGGGCTCTGGTCGCTaGTGCAGTGATCGGATCATC +
Preference number: 4 (lower is better)
Translates to: VCVGAESIQGREEGEKGCVGSGR*CSDRII
Trigger: GATGATCCGATCACTGCAGCAGCGACCAGAGCCCAC...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTCTGTTTCCAATGGCTaGCCTGGGCATTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: QKARESGHVWPAEEGKVVSVSNG*PGHWCC
Trigger: GCAGCACCAATGCCCAGGGCAGCCATTGGAAACAGA...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTCCGCCATTCTTGAGCTaGTCCCGCTTGACAGCCATC +
Preference number: 4 (lower is better)
Translates to: AEGTTQQKARESGHVWPAPPFLS*SRLTAI
Trigger: GATGGCTGTCAAGCGGGAGCAGCTCAAGAATGGCGG...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp AAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTCCGCCATTCTTGAGCTaGTCCCGCTTGACAGCCATC +
Preference number: 4 (lower is better)
Translates to: KKQGSLAMFGLLRKGRWSPPFLS*SRLTAI
Trigger: GATGGCTGTCAAGCGGGAGCAGCTCAAGAATGGCGG...AGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGAGGCAGAGAGTGACTTaGCCAGTTCAAAGATGGCGT +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRRQRVT*PVQRWR
Trigger: ACGCCATCTTTGAACTGGGCAAGTCACTCTCTGCCT...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGATTAGCAGCACAGCCTaGAGCAGAGCCACTTCCGTG +
Preference number: 4 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWISSTA*SRATSV
Trigger: CACGGAAGTGGCTCTGCTGCAGGCTGTGCTGCTAAT...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAATTCCATCTGGTGACCTaGCACTGTTCTCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREEFHLVT*HCSPLG
Trigger: ACCCAGAGGAGAACAGTGCCAGGTCACCAGATGGAA...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGATTCCATCTGGTGACCTaGCACTGTTCTCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GSAGVCVGAESIQGREEGFHLVT*HCSPLG
Trigger: ACCCAGAGGAGAACAGTGCCAGGTCACCAGATGGAA...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp ACCCACATCAAGGCCATCCCCCTCATTAGCACCAATGGCCCCCAGGAGAGGGCCTATACCCTGACATGCTaGTTTTCAGGGAACATTGGC +
Preference number: 4 (lower is better)
Translates to: THIKAIPLISTNGPQERAYTLTC*FSGNIG
Trigger: GCCAATGTTCCCTGAAAACCAGCATGTCAGGGTATA...GGCCCTCTCCTGGGGGCCATTGGTGCTAATGAGGGGGATGGCCTTGATGTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGCTAGAACCAAGTCCATaGCCATGCCCACGGCGATGC +
Preference number: 4 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRLEPSP*PCPRRC
Trigger: GCATCGCCGTGGGCATGGCCATGGACTTGGTTCTAG...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTCTAGAACCAAGTCCATaGCCATGCCCACGGCGATGC +
Preference number: 4 (lower is better)
Translates to: VCVGAESIQGREEGEKGCLEPSP*PCPRRC
Trigger: GCATCGCCGTGGGCATGGCCATGGACTTGGTTCTAG...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp AAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTCTAGAACCAAGTCCATaGCCATGCCCACGGCGATGC +
Preference number: 4 (lower is better)
Translates to: KKQGSLAMFGLLRKGRWSLEPSP*PCPRRC
Trigger: GCATCGCCGTGGGCATGGCCATGGACTTGGTTCTAG...AGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGCAATCAGCTTACGCTTaGCCACCCGCTTCGAGTCAT +
Preference number: 4 (lower is better)
Translates to: AVRVCVWELNLSKDERKEQSAYA*PPASSH
Trigger: ATGACTCGAAGCGGGTGGCCAAGCGTAAGCTGATTG...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAACAATCAGCTTACGCTTaGCCACCCGCTTCGAGTCAT +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREEQSAYA*PPASSH
Trigger: ATGACTCGAAGCGGGTGGCCAAGCGTAAGCTGATTG...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGGCATTGGTGCTGCGATaGGCCTCTGTGGCAATGTGG +
Preference number: 4 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRALVLR*ASVAMW
Trigger: CCACATTGCCACAGAGGCCCATCGCAGCACCAATGC...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTGCATTGGTGCTGCGATaGGCCTCTGTGGCAATGTGG +
Preference number: 4 (lower is better)
Translates to: VCVGAESIQGREEGEKGCALVLR*ASVAMW
Trigger: CCACATTGCCACAGAGGCCCATCGCAGCACCAATGC...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTTTCCAATGGCTGCCCTaGGCATTGGTGCTGCGATGG +
Preference number: 4 (lower is better)
Translates to: AEGTTQQKARESGHVWPAFQWLP*ALVLRW
Trigger: CCATCGCAGCACCAATGCCCAGGGCAGCCATTGGAA...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTTTCCAATGGCTGCCCTaGGCATTGGTGCTGCGATGG +
Preference number: 4 (lower is better)
Translates to: VCVGAESIQGREEGEKGCFQWLP*ALVLRW
Trigger: CCATCGCAGCACCAATGCCCAGGGCAGCCATTGGAA...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp AAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTCGCCTCTGTTTCCAATaGCTGCCCTGGGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: KKQGSLAMFGLLRKGRWSRLCFQ*LPWALV
Trigger: CACCAATGCCCAGGGCAGCCATTGGAAACAGAGGCG...AGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp CATAGCAAGTTCAGTTGTTTGCCCTGTCCCAGGGCTGGAGGTCTGAGGAGGGACCCGGCATGGAGACAATaGGTGACTGGCCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: HSKFSCLPCPRAGGLRRDPAWRQ*VTGQCH
Trigger: ATGACATTGGCCAGTCACCCATTGTCTCCATGCCGG...GTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp AAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTGTCTCCGTCCGGCATaGAGACAATGGGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: KKQGSLAMFGLLRKGRWSCLRPA*RQWVTG
Trigger: GCCAGTCACCCATTGTCTCCATGCCGGACGGAGACA...AGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTTGTCTCCGTCCGGCATaGAGACAATGGGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: VCVGAESIQGREEGEKGCCLRPA*RQWVTG
Trigger: GCCAGTCACCCATTGTCTCCATGCCGGACGGAGACA...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTGCCCAGTTCAAAGATaGCGTCGGAGACTACGCCCA +
Preference number: 4 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWCPVQR*RRRLRP
Trigger: TGGGCGTAGTCTCCGACGCCATCTTTGAACTGGGCA...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTGCCCAGTTCAAAGATaGCGTCGGAGACTACGCCCA +
Preference number: 4 (lower is better)
Translates to: QKARESGHVWPAEEGKVVCPVQR*RRRLRP
Trigger: TGGGCGTAGTCTCCGACGCCATCTTTGAACTGGGCA...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAACCTTCATCAGCAGCTTaGGCCAGAAGTGCGGAATGT +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREEPSSAA*ARSAEC
Trigger: ACATTCCGCACTTCTGGCCCAAGCTGCTGATGAAGG...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp AAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTAGAATTCCGCTTCGGTaGAGCAGCTCCAGGAGACGC +
Preference number: 4 (lower is better)
Translates to: KKQGSLAMFGLLRKGRWSRIPLR*SSSRRR
Trigger: GCGTCTCCTGGAGCTGCTCCACCGAAGCGGAATTCT...AGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGCCTGGGAGAAGGTATaGCACTCCTTCTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: AEGTTQQKARESGHVWPAAWEKV*HSFSFP
Trigger: GGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGC...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGCTGAGGAAGGGAAGGTaGTCTTACGGGATGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWLRKGR*SYGMGG
Trigger: ACCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAG...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGTGCGGGTGTGTGTGTaGGAGCTGAATCTATCCAAG +
Preference number: 4 (lower is better)
Translates to: GSAGVCVGAESIQGREEGVRVCV*ELNLSK
Trigger: CTTGGATAGATTCAGCTCCCACACACACACCCGCAC...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR TCA 90 bp ATAAATTTTAACCTCCAGAGGAGGAGCCAAGCCAAGCCGTTCTTTGCACCCAGGAGGGCACAGCACCCATaGTACCCGCCTCAGCACTTG +
Preference number: 4 (lower is better)
Translates to: INFNLQRRSQAKPFFAPRRAQHP*YPPQHL
Trigger: CAAGTGCTGAGGCGGGTATCATGGGTGCTGTGCCCT...CCTGGGTGCAAAGAACGGCTTGGCTTGGCTCCTCCTCTGGAGGTTAAAATTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTTGGTCGCTGCTGCAGTaGTCGGATCATCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: VCVGAESIQGREEGEKGCWSLLQ*SDHLLL
Trigger: AAGGAGGAGATGATCCGATCACTGCAGCAGCGACCA...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR TCA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTCATGGAGACAATGGGTaGCTGGCCAATGTCATCGGG +
Preference number: 4 (lower is better)
Translates to: AEGTTQQKARESGHVWPAHGDNG*LANVIG
Trigger: CCCGATGACATTGGCCAGTCACCCATTGTCTCCATG...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp AAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTCATGGAGACAATGGGTaGCTGGCCAATGTCATCGGG +
Preference number: 4 (lower is better)
Translates to: KKQGSLAMFGLLRKGRWSHGDNG*LANVIG
Trigger: CCCGATGACATTGGCCAGTCACCCATTGTCTCCATG...AGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp AGGCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGACCCCTTCAGGAGGATaGTCTGGTCTTCGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: RQRELHSKKQGSLAMFGLTPSGG*SGLRKA
Trigger: TGCCTTGCGAAGACCAGATCATCCTCCTGAAGGGGT...CAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTAGCAGGTACGCCTCCTaGCTCTTCTCGATCTTGTCC +
Preference number: 4 (lower is better)
Translates to: AEGTTQQKARESGHVWPASRYAS*LFSILS
Trigger: GGACAAGATCGAGAAGAGTCAGGAGGCGTACCTGCT...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp AGGCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCCATGTTTGGCCTGCTaGGGAAGGGAAGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: RQRELHSKKQGSLAMFGLPCLAC*GREGGL
Trigger: AAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGG...CAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTGTCCAGAGATCCCTTaGCAAATCGCCACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWCPEIP*QIATAV
Trigger: GACAGCAGTGGCGATTTGTCAAGGGATCTCTGGACA...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394121.8
CDS-3UTR TCA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGTGTGTGTGTGGGAGCTaGATCTATCCAAGGACGAGA +
Preference number: 4 (lower is better)
Translates to: AVRVCVWELNLSKDERKECVCGS*IYPRTR
Trigger: TCTCGTCCTTGGATAGATTCAGCTCCCACACACACA...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR TCA 90 bp GGCACTCCTGAGTCGCCCTGGCTCCTCCCCTACCATGTGTACTCACTCACACATGAGGTATGTGTGTTATaGGTGATGGGAGGGGCAATA +
Preference number: 4 (lower is better)
Translates to: GTPESPWLLPYHVYSLTHEVCVL*VMGGAI
Trigger: TATTGCCCCTCCCATCACTCATAACACACATACCTC...ATGTGTGAGTGAGTACACATGGTAGGGGAGGAGCCAGGGCGACTCAGGAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTCAATTCCATCCAGGATaGCCTCCAGCACGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: AEGTTQQKARESGHVWPAQFHPG*PPARQE
Trigger: CTCTTGGCGTGCTGGAGGGCATCCTGGATGGAATTG...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAACCCACACTCCACCTTaGTTGGCTTCTGTTCCATTC +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREETHTPP*LASVPF
Trigger: GAATGGAACAGAAGCCAAGCAAGGTGGAGTGTGGGT...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp CATAGCAAGTTCAGTTGTTTGCCCTGTCCCAGGGCTGGAGGTCTGAGGAGGGACGTAGTGATAACCAGTTaGCTTGTCCCCACACACGAC +
Preference number: 4 (lower is better)
Translates to: HSKFSCLPCPRAGGLRRDVVITS*LVPTHD
Trigger: GTCGTGTGTGGGGACAAGGCAACTGGTTATCACTAC...GTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp GCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGAGCAGCTGTCATATTTaGAGGAATAGGTGGGATGGA +
Preference number: 4 (lower is better)
Translates to: AEAWEKVWHSFSFPIGLLSSCHI*RNRWDG
Trigger: TCCATCCCACCTATTCCTGCAAATATGACAGCTGCT...CAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTTCTGTTTCCAATGGCTaGCCTGGGCATTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VCVGAESIQGREEGEKGCSVSNG*PGHWCC
Trigger: GCAGCACCAATGCCCAGGGCAGCCATTGGAAACAGA...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp AAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTCTGTTTCCAATGGCTaGCCTGGGCATTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KKQGSLAMFGLLRKGRWSSVSNG*PGHWCC
Trigger: GCAGCACCAATGCCCAGGGCAGCCATTGGAAACAGA...AGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGGCAGAGAGTGACTTaGCCAGTTCAAAGATGGCGT +
Preference number: 4 (lower is better)
Translates to: AVRVCVWELNLSKDERKERQRVT*PVQRWR
Trigger: ACGCCATCTTTGAACTGGGCAAGTCACTCTCTGCCT...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp AAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTATTAGCAGCACAGCCTaGAGCAGAGCCACTTCCGTG +
Preference number: 4 (lower is better)
Translates to: KKQGSLAMFGLLRKGRWSISSTA*SRATSV
Trigger: CACGGAAGTGGCTCTGCTGCAGGCTGTGCTGCTAAT...AGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp CTGGCATCCAGCATGAGAGGTAGATGGAACTCAGCGGGCACGAGTGGCAGAAAGTGGCAGGTTCCCCACTaGTTAAGACATTTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: LASSMRGRWNSAGTSGRKWQVPH*LRHFCP
Trigger: GGGGCAAAAATGTCTTAAGCAGTGGGGAACCTGCCA...CTTTCTGCCACTCGTGCCCGCTGAGTTCCATCTACCTCTCATGCTGGATGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp CAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGTTCCATCTGGTGACCTaGCACTGTTCTCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: QQKARESGHVWPAEEGKVFHLVT*HCSPLG
Trigger: ACCCAGAGGAGAACAGTGCCAGGTCACCAGATGGAA...CACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGATGGAGGTTCTTCTaGATTGTGCGGCGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREEGWRFF*IVRRKK
Trigger: CTTCTTTCGCCGCACAATCCAGAAGAACCTCCATCC...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp GCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGATTTGCAGGAATAGGTaGGATGGAGGTTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: AEAWEKVWHSFSFPIGLLICRNR*DGGSSG
Trigger: TCCAGAAGAACCTCCATCCCACCTATTCCTGCAAAT...CAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp CATAGCAAGTTCAGTTGTTTGCCCTGTCCCAGGGCTGGAGGTCTGAGGAGGGACGCCTCTGTGGCAATGTaGATCAGATCCCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: HSKFSCLPCPRAGGLRRDASVAM*IRSHSS
Trigger: TGAAGAGTGGGATCTGATCCACATTGCCACAGAGGC...GTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGGCCTCTGTGGCAATGTaGATCAGATCCCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLASVAM*IRSHSS
Trigger: TGAAGAGTGGGATCTGATCCACATTGCCACAGAGGC...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTTGCGATGGGCCTCTGTaGCAATGTGGATCAGATCCC +
Preference number: 4 (lower is better)
Translates to: VCVGAESIQGREEGEKGCCDGPL*QCGSDP
Trigger: GGGATCTGATCCACATTGCCACAGAGGCCCATCGCA...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCCCTTCATCAGCAGCTTaGGCCAGAAGTGCGGAATGT +
Preference number: 4 (lower is better)
Translates to: QKARESGHVWPAEEGKVVPSSAA*ARSAEC
Trigger: ACATTCCGCACTTCTGGCCCAAGCTGCTGATGAAGG...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGCCCTGCACCGGGCACTaGGGATACAGACATGATTCA +
Preference number: 4 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRPCTGH*GYRHDS
Trigger: TGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGG...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTCCCTGCACCGGGCACTaGGGATACAGACATGATTCA +
Preference number: 4 (lower is better)
Translates to: AEGTTQQKARESGHVWPAPCTGH*GYRHDS
Trigger: TGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGG...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR CCA 90 bp ATAAATTTTAACCTCCAGAGGAGGAGCCAAGCCAAGCCGTTCTTTGCACCCAGGGACCTCGAGGAAGAGTaGGGGGAAGAGTTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: INFNLQRRSQAKPFFAPRDLEEE*GEEFGG
Trigger: CCCACCGAACTCTTCCCCCCACTCTTCCTCGAGGTC...CCTGGGTGCAAAGAACGGCTTGGCTTGGCTCCTCCTCTGGAGGTTAAAATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp ATTTTAACCTCCAGAGGAGGAGCCAAGCCAAGCCGTTCTTTGCACCCAGGCATCCTTGGGGCTCTGGTGTaGGGGCATTTCTCTCTGATG +
Preference number: 4 (lower is better)
Translates to: ILTSRGGAKPSRSLHPGILGALV*GHFSLM
Trigger: CATCAGAGAGAAATGCCCCCACACCAGAGCCCCAAG...GATGCCTGGGTGCAAAGAACGGCTTGGCTTGGCTCCTCCTCTGGAGGTTAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp CATAGCAAGTTCAGTTGTTTGCCCTGTCCCAGGGCTGGAGGTCTGAGGAGGGACGAGCAGGGAGGAGGCTaGATGAGGTATGTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: HSKFSCLPCPRAGGLRRDEQGGG*MRYVCY
Trigger: ATAACACACATACCTCATCCAGCCTCCTCCCTGCTC...GTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GCACATAACAGACATACTGATTGTCAACGTGGGGCAGGAGTAGGAGCCCCTCAAGGCCACCTCTCCATCTaGTCAGTTTGTGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: AHNRHTDCQRGAGVGAPQGHLSI*SVCGVG
Trigger: ACCCACCCCACAAACTGACCAGATGGAGAGGTGGCC...TTGAGGGGCTCCTACTCCTGCCCCACGTTGACAATCAGTATGTCTGTTATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp GCACATAACAGACATACTGATTGTCAACGTGGGGCAGGAGTAGGAGCCCCTCAATCGCTTTCCATCTGGTaGCCTGGCACTGTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: AHNRHTDCQRGAGVGAPQSLSIW*PGTVLL
Trigger: GAGGAGAACAGTGCCAGGTCACCAGATGGAAAGCGA...TTGAGGGGCTCCTACTCCTGCCCCACGTTGACAATCAGTATGTCTGTTATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp GGCACTCCTGAGTCGCCCTGGCTCCTCCCCTACCATGTGTACTCACTCACACATGTTAAAGGCAGAGAGTaGCTTGCCCAGTTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: GTPESPWLLPYHVYSLTHVKGRE*LAQFKD
Trigger: ATCTTTGAACTGGGCAAGTCACTCTCTGCCTTTAAC...ATGTGTGAGTGAGTACACATGGTAGGGGAGGAGCCAGGGCGACTCAGGAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp GCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGATATACCCTGACATaGTGGTTTTCAGGGAACATT +
Preference number: 4 (lower is better)
Translates to: AEAWEKVWHSFSFPIGLLGYTLT*WFSGNI
Trigger: AATGTTCCCTGAAAACCAGCATGTCAGGGTATATCC...CAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGGTAGTGATAACCAGTTaGCTTGTCCCCACACACGAC +
Preference number: 4 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWVVITS*LVPTHD
Trigger: GTCGTGTGTGGGGACAAGGCAACTGGTTATCACTAC...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp CAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGAGGCAGAGAGTGACTTaGCCAGTTCAAAGATGGCGT +
Preference number: 4 (lower is better)
Translates to: QQKARESGHVWPAEEGKVRQRVT*PVQRWR
Trigger: ACGCCATCTTTGAACTGGGCAAGTCACTCTCTGCCT...CACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GCACATAACAGACATACTGATTGTCAACGTGGGGCAGGAGTAGGAGCCCCTCAACCCCGACCCAACCAATaGAGCAGCATCCGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: AHNRHTDCQRGAGVGAPQPRPNQ*SSIRFL
Trigger: TAGAAACCGGATGCTGCTGCATTGGTTGGGTCGGGG...TTGAGGGGCTCCTACTCCTGCCCCACGTTGACAATCAGTATGTCTGTTATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGTATACCCTGACATGCTaGTTTTCAGGGAACATTGGC +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRYTLTC*FSGNIG
Trigger: GCCAATGTTCCCTGAAAACCAGCATGTCAGGGTATA...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCGGATGGAGGTTCTTCTaGATTGTGCGGCGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: QKARESGHVWPAEEGKVVGWRFF*IVRRKK
Trigger: CTTCTTTCGCCGCACAATCCAGAAGAACCTCCATCC...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGGGATGGAGGTTCTTCTaGATTGTGCGGCGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWGWRFF*IVRRKK
Trigger: CTTCTTTCGCCGCACAATCCAGAAGAACCTCCATCC...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTCAATCAGCTTACGCTTaGCCACCCGCTTCGAGTCAT +
Preference number: 4 (lower is better)
Translates to: KKQGSLAMFGLLRKGRWSQSAYA*PPASSH
Trigger: ATGACTCGAAGCGGGTGGCCAAGCGTAAGCTGATTG...AGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGGCCTCTGTGGCAATGTaGATCAGATCCCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWASVAM*IRSHSS
Trigger: TGAAGAGTGGGATCTGATCCACATTGCCACAGAGGC...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTCCGGCATGGAGACAATaGGTGACTGGCCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: AEGTTQQKARESGHVWPAPAWRQ*VTGQCH
Trigger: ATGACATTGGCCAGTCACCCATTGTCTCCATGCCGG...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp ATTTTAACCTCCAGAGGAGGAGCCAAGCCAAGCCGTTCTTTGCACCCAGGCATCCCGGCATGGAGACAATaGGTGACTGGCCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: ILTSRGGAKPSRSLHPGIPAWRQ*VTGQCH
Trigger: ATGACATTGGCCAGTCACCCATTGTCTCCATGCCGG...GATGCCTGGGTGCAAAGAACGGCTTGGCTTGGCTCCTCCTCTGGAGGTTAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTCCTTCATCAGCAGCTTaGGCCAGAAGTGCGGAATGT +
Preference number: 4 (lower is better)
Translates to: VCVGAESIQGREEGEKGCPSSAA*ARSAEC
Trigger: ACATTCCGCACTTCTGGCCCAAGCTGCTGATGAAGG...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp AAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTCCTTCATCAGCAGCTTaGGCCAGAAGTGCGGAATGT +
Preference number: 4 (lower is better)
Translates to: KKQGSLAMFGLLRKGRWSPSSAA*ARSAEC
Trigger: ACATTCCGCACTTCTGGCCCAAGCTGCTGATGAAGG...AGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGAGACACAGTCTAGCTTaGGAAACAGACTCATGCCCG +
Preference number: 4 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWRHSLA*ETDSCP
Trigger: CGGGCATGAGTCTGTTTCCCAAGCTAGACTGTGTCT...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR CCA 90 bp ATTTTAACCTCCAGAGGAGGAGCCAAGCCAAGCCGTTCTTTGCACCCAGGCATCCATTTCTCTCTGATGTaGGGGAAGAAGGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: ILTSRGGAKPSRSLHPGIHFSLM*GKKGQL
Trigger: GAGCTGCCCCTTCTTCCCCCACATCAGAGAGAAATG...GATGCCTGGGTGCAAAGAACGGCTTGGCTTGGCTCCTCCTCTGGAGGTTAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GCACATAACAGACATACTGATTGTCAACGTGGGGCAGGAGTAGGAGCCCCTCAACATCTGGTCAGTTTGTaGGGTGGGTACTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: AHNRHTDCQRGAGVGAPQHLVSL*GGYSAS
Trigger: GCTGGCAGAGTACCCACCCCACAAACTGACCAGATG...TTGAGGGGCTCCTACTCCTGCCCCACGTTGACAATCAGTATGTCTGTTATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp ATTTTAACCTCCAGAGGAGGAGCCAAGCCAAGCCGTTCTTTGCACCCAGGCATCAGTTCACAGCTGAGCTaGCTTCTGTGGTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ILTSRGGAKPSRSLHPGISSQLS*LLWCVL
Trigger: GAGCACACACCACAGAAGCCAGCTCAGCTGTGAACT...GATGCCTGGGTGCAAAGAACGGCTTGGCTTGGCTCCTCCTCTGGAGGTTAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp CAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGCTGGGGATACAGACATaGTTCAGACACAGTCTAGCT +
Preference number: 4 (lower is better)
Translates to: QQKARESGHVWPAEEGKVLGIQT*FRHSLA
Trigger: AGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAG...CACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR GCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGGGATATACCCTGACATaGTGGTTTTCAGGGAACATT +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRGYTLT*WFSGNI
Trigger: AATGTTCCCTGAAAACCAGCATGTCAGGGTATATCC...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp AGGCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGGTAGTGATAACCAGTTaGCTTGTCCCCACACACGAC +
Preference number: 4 (lower is better)
Translates to: RQRELHSKKQGSLAMFGLVVITS*LVPTHD
Trigger: GTCGTGTGTGGGGACAAGGCAACTGGTTATCACTAC...CAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGAGCAGCTGTCATATTTaGAGGAATAGGTGGGATGGA +
Preference number: 4 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLSSCHI*RNRWDG
Trigger: TCCATCCCACCTATTCCTGCAAATATGACAGCTGCT...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAAGCAGCTGTCATATTTaGAGGAATAGGTGGGATGGA +
Preference number: 4 (lower is better)
Translates to: GSAGVCVGAESIQGREEGSSCHI*RNRWDG
Trigger: TCCATCCCACCTATTCCTGCAAATATGACAGCTGCT...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAAGCAGCTGTCATATTTaGAGGAATAGGTGGGATGGA +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREESSCHI*RNRWDG
Trigger: TCCATCCCACCTATTCCTGCAAATATGACAGCTGCT...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTAGGCAGAGAGTGACTTaGCCAGTTCAAAGATGGCGT +
Preference number: 4 (lower is better)
Translates to: AEGTTQQKARESGHVWPARQRVT*PVQRWR
Trigger: ACGCCATCTTTGAACTGGGCAAGTCACTCTCTGCCT...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGTACAGAATCGAACTCTaGACTTCTCTCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRYRIEL*TSLSFI
Trigger: GATGAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTA...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000394121.8
CDS-3UTR GCA 90 bp ATAAATTTTAACCTCCAGAGGAGGAGCCAAGCCAAGCCGTTCTTTGCACCCAGGGCAAGTTCAGTTGTTTaGCCTGTCCCAGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: INFNLQRRSQAKPFFAPRASSVV*PVPGLE
Trigger: CTCCAGCCCTGGGACAGGGCAAACAACTGAACTTGC...CCTGGGTGCAAAGAACGGCTTGGCTTGGCTCCTCCTCTGGAGGTTAAAATTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGATTTGTCTTCTCCCCTTaGTTGGTTTCCAAAGTGCAG +
Preference number: 4 (lower is better)
Translates to: GSAGVCVGAESIQGREEGFVFSP*LVSKVQ
Trigger: CTGCACTTTGGAAACCAAGCAAGGGGAGAAGACAAA...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp GGCACTCCTGAGTCGCCCTGGCTCCTCCCCTACCATGTGTACTCACTCACACATTGCTTAAGACATTTTTaGCCCAATAGTGCAAAGCGC +
Preference number: 4 (lower is better)
Translates to: GTPESPWLLPYHVYSLTHCLRHF*PNSAKR
Trigger: GCGCTTTGCACTATTGGGGCAAAAATGTCTTAAGCA...ATGTGTGAGTGAGTACACATGGTAGGGGAGGAGCCAGGGCGACTCAGGAGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp GCACATAACAGACATACTGATTGTCAACGTGGGGCAGGAGTAGGAGCCCCTCAATCCCATGTCCGTGTGTaGATGTCCGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: AHNRHTDCQRGAGVGAPQSHVRV*MSVCVC
Trigger: ACACACACACACGGACATGCACACACGGACATGGGA...TTGAGGGGCTCCTACTCCTGCCCCACGTTGACAATCAGTATGTCTGTTATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGTATACCCTGACATGCTaGTTTTCAGGGAACATTGGC +
Preference number: 4 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLYTLTC*FSGNIG
Trigger: GCCAATGTTCCCTGAAAACCAGCATGTCAGGGTATA...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR CCA 90 bp ATTTTAACCTCCAGAGGAGGAGCCAAGCCAAGCCGTTCTTTGCACCCAGGCATCGGATGGAGGTTCTTCTaGATTGTGCGGCGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: ILTSRGGAKPSRSLHPGIGWRFF*IVRRKK
Trigger: CTTCTTTCGCCGCACAATCCAGAAGAACCTCCATCC...GATGCCTGGGTGCAAAGAACGGCTTGGCTTGGCTCCTCCTCTGGAGGTTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAATTTGCAGGAATAGGTaGGATGGAGGTTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LGSAGVCVGAESIQGREEICRNR*DGGSSG
Trigger: TCCAGAAGAACCTCCATCCCACCTATTCCTGCAAAT...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTAGACACAGTCTAGCTTaGGAAACAGACTCATGCCCG +
Preference number: 4 (lower is better)
Translates to: AEGTTQQKARESGHVWPARHSLA*ETDSCP
Trigger: CGGGCATGAGTCTGTTTCCCAAGCTAGACTGTGTCT...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR CCA 90 bp CTGGCATCCAGCATGAGAGGTAGATGGAACTCAGCGGGCACGAGTGGCAGAAAGTTACTGTCCTCCTTATaGACGGTCTCTCTCTCACAA +
Preference number: 4 (lower is better)
Translates to: LASSMRGRWNSAGTSGRKLLSSL*TVSLSQ
Trigger: TTGTGAGAGAGAGACCGTCCATAAGGAGGACAGTAA...CTTTCTGCCACTCGTGCCCGCTGAGTTCCATCTACCTCTCATGCTGGATGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCGTTAAAGGCAGAGAGTaGCTTGCCCAGTTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: QKARESGHVWPAEEGKVVVKGRE*LAQFKD
Trigger: ATCTTTGAACTGGGCAAGTCACTCTCTGCCTTTAAC...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGCTGGGGATACAGACATaGTTCAGACACAGTCTAGCT +
Preference number: 4 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRLGIQT*FRHSLA
Trigger: AGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAG...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGGGATATACCCTGACATaGTGGTTTTCAGGGAACATT +
Preference number: 4 (lower is better)
Translates to: AVRVCVWELNLSKDERKEGYTLT*WFSGNI
Trigger: AATGTTCCCTGAAAACCAGCATGTCAGGGTATATCC...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp CATAGCAAGTTCAGTTGTTTGCCCTGTCCCAGGGCTGGAGGTCTGAGGAGGGACGGATATACCCTGACATaGTGGTTTTCAGGGAACATT +
Preference number: 4 (lower is better)
Translates to: HSKFSCLPCPRAGGLRRDGYTLT*WFSGNI
Trigger: AATGTTCCCTGAAAACCAGCATGTCAGGGTATATCC...GTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGAGCAGCTGTCATATTTaGAGGAATAGGTGGGATGGA +
Preference number: 4 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWSSCHI*RNRWDG
Trigger: TCCATCCCACCTATTCCTGCAAATATGACAGCTGCT...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR GCA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTTCAATACCGATCCACTaGCTCCCTTTTCCAACGTCA +
Preference number: 4 (lower is better)
Translates to: AEGTTQQKARESGHVWPASIPIH*LPFPTS
Trigger: TGACGTTGGAAAAGGGAGGCAGTGGATCGGTATTGA...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394121.8
CDS-3UTR CCA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGTTTTCAGGGAACATTaGCCGTTCTTTCTTTTTCGC +
Preference number: 4 (lower is better)
Translates to: GSAGVCVGAESIQGREEGVFREH*PFFLFR
Trigger: GCGAAAAAGAAAGAACGGCCAATGTTCCCTGAAAAC...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCCGTTTTTCATCCTTGTaGGGGTTCATTCCCTGTTAC +
Preference number: 4 (lower is better)
Translates to: QKARESGHVWPAEEGKVVRFSSL*GFIPCY
Trigger: GTAACAGGGAATGAACCCCCACAAGGATGAAAAACG...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394121.8
CDS-3UTR CCA 90 bp GCACATAACAGACATACTGATTGTCAACGTGGGGCAGGAGTAGGAGCCCCTCAAAAGAGGGCCTACCCATaGGACTGGAGTAATACAGGA +
Preference number: 4 (lower is better)
Translates to: AHNRHTDCQRGAGVGAPQKRAYP*DWSNTG
Trigger: TCCTGTATTACTCCAGTCCCATGGGTAGGCCCTCTT...TTGAGGGGCTCCTACTCCTGCCCCACGTTGACAATCAGTATGTCTGTTATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR TCA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGTTAAAGGCAGAGAGTaGCTTGCCCAGTTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: AEGTTQQKARESGHVWPAVKGRE*LAQFKD
Trigger: ATCTTTGAACTGGGCAAGTCACTCTCTGCCTTTAAC...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR TCA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTGTTAAAGGCAGAGAGTaGCTTGCCCAGTTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: VCVGAESIQGREEGEKGCVKGRE*LAQFKD
Trigger: ATCTTTGAACTGGGCAAGTCACTCTCTGCCTTTAAC...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR GCA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTACAGAATCGAACTCTaGACTTCTCTCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: QKARESGHVWPAEEGKVVYRIEL*TSLSFI
Trigger: GATGAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTA...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000394121.8
CDS-3UTR CCA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGTATACCCTGACATGCTaGTTTTCAGGGAACATTGGC +
Preference number: 4 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRYTLTC*FSGNIG
Trigger: GCCAATGTTCCCTGAAAACCAGCATGTCAGGGTATA...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTTATACCCTGACATGCTaGTTTTCAGGGAACATTGGC +
Preference number: 4 (lower is better)
Translates to: VCVGAESIQGREEGEKGCYTLTC*FSGNIG
Trigger: GCCAATGTTCCCTGAAAACCAGCATGTCAGGGTATA...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CCA 90 bp AGGCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGATTTGCAGGAATAGGTaGGATGGAGGTTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RQRELHSKKQGSLAMFGLICRNR*DGGSSG
Trigger: TCCAGAAGAACCTCCATCCCACCTATTCCTGCAAAT...CAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp ATTTTAACCTCCAGAGGAGGAGCCAAGCCAAGCCGTTCTTTGCACCCAGGCATCATTTGCAGGAATAGGTaGGATGGAGGTTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: ILTSRGGAKPSRSLHPGIICRNR*DGGSSG
Trigger: TCCAGAAGAACCTCCATCCCACCTATTCCTGCAAAT...GATGCCTGGGTGCAAAGAACGGCTTGGCTTGGCTCCTCCTCTGGAGGTTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp ATAAATTTTAACCTCCAGAGGAGGAGCCAAGCCAAGCCGTTCTTTGCACCCAGGGCCTCTGTGGCAATGTaGATCAGATCCCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: INFNLQRRSQAKPFFAPRASVAM*IRSHSS
Trigger: TGAAGAGTGGGATCTGATCCACATTGCCACAGAGGC...CCTGGGTGCAAAGAACGGCTTGGCTTGGCTCCTCCTCTGGAGGTTAAAATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR GCA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGGGATATACCCTGACATaGTGGTTTTCAGGGAACATT +
Preference number: 4 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRGYTLT*WFSGNI
Trigger: AATGTTCCCTGAAAACCAGCATGTCAGGGTATATCC...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGGCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGGTTTTCAGGGAACATTaGCCGTTCTTTCTTTTTCGC +
Preference number: 4 (lower is better)
Translates to: RQRELHSKKQGSLAMFGLVFREH*PFFLFR
Trigger: GCGAAAAAGAAAGAACGGCCAATGTTCCCTGAAAAC...CAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CCA 90 bp ATAAATTTTAACCTCCAGAGGAGGAGCCAAGCCAAGCCGTTCTTTGCACCCAGGGCCTACCCATGGGACTaGAGTAATACAGGATTCAGT +
Preference number: 4 (lower is better)
Translates to: INFNLQRRSQAKPFFAPRAYPWD*SNTGFS
Trigger: ACTGAATCCTGTATTACTCCAGTCCCATGGGTAGGC...CCTGGGTGCAAAGAACGGCTTGGCTTGGCTCCTCCTCTGGAGGTTAAAATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp GCACATAACAGACATACTGATTGTCAACGTGGGGCAGGAGTAGGAGCCCCTCAAGTTTTCAGGGAACATTaGCCGTTCTTTCTTTTTCGC +
Preference number: 4 (lower is better)
Translates to: AHNRHTDCQRGAGVGAPQVFREH*PFFLFR
Trigger: GCGAAAAAGAAAGAACGGCCAATGTTCCCTGAAAAC...TTGAGGGGCTCCTACTCCTGCCCCACGTTGACAATCAGTATGTCTGTTATGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CCA 90 bp AAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTCAACACACCTTTTATaGAGTACCTACTCTATGCCA +
Preference number: 4 (lower is better)
Translates to: KKQGSLAMFGLLRKGRWSSTHLL*STYSMP
Trigger: TGGCATAGAGTAGGTACTCCATAAAAGGTGTGTTGA...AGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR CCA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGTCAACACACCTTTTATaGAGTACCTACTCTATGCCA +
Preference number: 4 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRSTHLL*STYSMP
Trigger: TGGCATAGAGTAGGTACTCCATAAAAGGTGTGTTGA...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR GCA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGTGGGAAACAGACTCATaGCCGACTAATTATAAAACA +
Preference number: 4 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRWETDS*PTNYKT
Trigger: TGTTTTATAATTAGTCGGGCATGAGTCTGTTTCCCA...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR GCA 90 bp AGGCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGTGGGAAACAGACTCATaGCCGACTAATTATAAAACA +
Preference number: 4 (lower is better)
Translates to: RQRELHSKKQGSLAMFGLWETDS*PTNYKT
Trigger: TGTTTTATAATTAGTCGGGCATGAGTCTGTTTCCCA...CAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR CAA 90 bp AGACGCTCACGCACAGCCCTCCTACCCCCGACCCAACCAATGCAGCAGCATCCGTCGGCAGCCCTACCCTaGGGGCTCTGGTGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: RRSRTALLPPTQPMQQHPSAALP*GLWCGG
Trigger: GCCCCCACACCAGAGCCCCAAGGGTAGGGCTGCCGA...CGGATGCTGCTGCATTGGTTGGGTCGGGGGTAGGAGGGCTGTGCGTGAGCGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS GCA 90 bp GTGGGAGGGCTGGGGGCAAGCTGGGTTTGTGGGTCCCGGGCTGTGTaGTGGGGGAGTAGCTTCGGAGTCTTGTCCTGTCCAGAGATCCCC +
Preference number: 5 (lower is better)
Translates to: VGGLGASWVCGSRAV*WGSSFGVLSCPEIP
Trigger: GGGGATCTCTGGACAGGACAAGACTCCGAAGCTACTCCCCCAGCACACAGCCCGGGACCCACAAACCCAGCTTGCCCCCAGCCCTCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546243.5
CDS CCA 90 bp TCGTCTTCCCCACAGACCGCTCGGGCATGGAGAATTCCGCTTCGGTaGAGCAGCTCCAGGAGACGCTGCTGCGGGCTCTTCGGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: SSSPQTARAWRIPLR*SSSRRRCCGLFGLW
Trigger: CCAGAGCCCGAAGAGCCCGCAGCAGCGTCTCCTGGAGCTGCTCCACCGAAGCGGAATTCTCCATGCCCGAGCGGTCTGTGGGGAAGACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS TCA 90 bp AGCAGCTCCAGGAGACGCTGCTGCGGGCTCTTCGGGCTCTGGTGCTaGAGAACCGGCCCTTGGAGACTTCCCGCTTCACCAAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SSSRRRCCGLFGLWC*RTGPWRLPASPSCC
Trigger: GCAGCAGCTTGGTGAAGCGGGAAGTCTCCAAGGGCCGGTTCTTCAGCACCAGAGCCCGAAGAGCCCGCAGCAGCGTCTCCTGGAGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS GCA 90 bp GTGGGAGGGCTGGGGGCAAGCTGGGTTTGTGGGTCCCGGGCTGTGTaGTGGGGGAGTAGCTTCGGAGTCTTGTCCTGTCCAGAGATCCCT +
Preference number: 5 (lower is better)
Translates to: VGGLGASWVCGSRAV*WGSSFGVLSCPEIP
Trigger: AGGGATCTCTGGACAGGACAAGACTCCGAAGCTACTCCCCCAGCACACAGCCCGGGACCCACAAACCCAGCTTGCCCCCAGCCCTCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000450525.7
ENST00000577288.5
ENST00000578218.5
ENST00000584985.5
ENST00000585047.5
CDS GCA 90 bp AGACCTCCGGTTCCTCCTCAGAGGAGCTCGGGGAGTCCGCCTCACTaGTGTCGTCTTCCCCACAGACCGCTCGGGCATGGAGAATTCCGC +
Preference number: 5 (lower is better)
Translates to: RPPVPPQRSSGSPPH*CRLPHRPLGHGEFR
Trigger: GCGGAATTCTCCATGCCCGAGCGGTCTGTGGGGAAGACGACAGCAGTGAGGCGGACTCCCCGAGCTCCTCTGAGGAGGAACCGGAGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS GCA 90 bp GTGGGAGGGCTGGGGGCAAGCTGGGTTTGTGGGTCCCGGGCTGTGTaGTGGGGGAGTAGCTTCGGAGTCTTGTCCTGTCCAGAGATCCCA +
Preference number: 5 (lower is better)
Translates to: VGGLGASWVCGSRAV*WGSSFGVLSCPEIP
Trigger: TGGGATCTCTGGACAGGACAAGACTCCGAAGCTACTCCCCCAGCACACAGCCCGGGACCCACAAACCCAGCTTGCCCCCAGCCCTCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577486.1
CDS CCA 90 bp GAGTCCGCCTCACTGCTGTCGTCTTCCCCACAGACCGCTCGGGCATaGAGAATTCCGCTTCGGTGGAGCAGCTCCAGGAGACGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ESASLLSSSPQTARA*RIPLRWSSSRRRCC
Trigger: GCAGCAGCGTCTCCTGGAGCTGCTCCACCGAAGCGGAATTCTCCATGCCCGAGCGGTCTGTGGGGAAGACGACAGCAGTGAGGCGGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp AGCACCCTCACCAGGAGGGCGAGAGGGGCTCAAGCCAAAGTCCCTGAATTAGAGGGCTCTGGCAACCCCTaGTCCTGGCCTGGCCCCCTC +
Preference number: 5 (lower is better)
Translates to: STLTRRARGAQAKVPELEGSGNP*SWPGPL
Trigger: GAGGGGGCCAGGCCAGGACAAGGGGTTGCCAGAGCC...CTCTAATTCAGGGACTTTGGCTTGAGCCCCTCTCGCCCTCCTGGTGAGGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS CCA 90 bp CCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTaGGGGGCTTCAGGGAGAGGCTGCATTGCCTGCCAGGTCCTCGCA +
Preference number: 5 (lower is better)
Translates to: PGRRYGTPSPSPSAF*GASGRGCIACQVLA
Trigger: TGCGAGGACCTGGCAGGCAATGCAGCCTCTCCCTGAAGCCCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp AGACGCTCACGCACAGCCCTCCTACCCCCGACCCAACCAATGCAGCAGCATCCGTACCCGCCTCAGCACTaGGCCTTTCACACCATGCCC +
Preference number: 5 (lower is better)
Translates to: RRSRTALLPPTQPMQQHPYPPQH*AFHTMP
Trigger: GGGCATGGTGTGAAAGGCCAAGTGCTGAGGCGGGTA...CGGATGCTGCTGCATTGGTTGGGTCGGGGGTAGGAGGGCTGTGCGTGAGCGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CAA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGGCTTCCAGGTCCACCTaGTCTCCGTCCGGCATGGAG +
Preference number: 5 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGASRST*SPSGME
Trigger: CTCCATGCCGGACGGAGACAAGGTGGACCTGGAAGC...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp GAGAGAGAGAGGATAGAGACAAAGACAGCGCGGGCAGCCCGAGGCCCCAGCAGGGGCCCTCCACCCCTGTaGGAACACCTGAACGATTGG +
Preference number: 5 (lower is better)
Translates to: ERERIETKTARAARGPSRGPPPL*EHLNDW
Trigger: CCAATCGTTCAGGTGTTCCAACAGGGGTGGAGGGCC...CCTGCTGGGGCCTCGGGCTGCCCGCGCTGTCTTTGTCTCTATCCTCTCTCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS GCA 90 bp GCAATGTGGATCAGATCCCACTCTTCAGGAGTGGGCTCTGGTCGCTaGTGCAGTGATCGGATCATCTCCTCCTTCCGCCGCCGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: AMWIRSHSSGVGSGR*CSDRIISSFRRRSR
Trigger: CCGGGAGCGGCGGCGGAAGGAGGAGATGATCCGATCACTGCAGCAGCGACCAGAGCCCACTCCTGAAGAGTGGGATCTGATCCACATTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000450525.7
ENST00000546243.5
ENST00000577637.1
ENST00000584985.5
CDS CCA 90 bp TTGTCCTGTCCAGAGATCCCCCGCATGCGCAGAGCCACAGGGCTCTaGGTACCGTTCCAGGAGATATTCAGAGCCCTCCCCAGCCCACAC +
Preference number: 5 (lower is better)
Translates to: LSCPEIPRMRRATGL*VPFQEIFRALPSPH
Trigger: GTGTGGGCTGGGGAGGGCTCTGAATATCTCCTGGAACGGTACCCAGAGCCCTGTGGCTCTGCGCATGCGGGGGATCTCTGGACAGGACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546243.5
CDS-3UTR CAA 90 bp ACCCACATCAAGGCCATCCCCCTCATTAGCACCAATGGCCCCCAGGAGAGGGCCACGGCGATGCACTTCTaGAAGCGGCACAGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: THIKAIPLISTNGPQERATAMHF*KRHSWH
Trigger: GTGCCAGCTGTGCCGCTTCAAGAAGTGCATCGCCGT...GGCCCTCTCCTGGGGGCCATTGGTGCTAATGAGGGGGATGGCCTTGATGTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CAA 90 bp GCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGCTTCCAGGTCCACCTaGTCTCCGTCCGGCATGGAG +
Preference number: 5 (lower is better)
Translates to: AEAWEKVWHSFSFPIGLLASRST*SPSGME
Trigger: CTCCATGCCGGACGGAGACAAGGTGGACCTGGAAGC...CAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp AGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGGGGTTGAGCTGCTCCCGCTaGACAGCCATCTCCCCACTC +
Preference number: 5 (lower is better)
Translates to: RPGRRYGTPSPSPSAFWGLSCSR*TAISPL
Trigger: GAGTGGGGAGATGGCTGTCAAGCGGGAGCAGCTCAA...CCCCCAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp GGAGGGTTCTGGGAGACGCTCACGCACAGCCCTCCTACCCCCGACCCAACCAATACGGGCAGCATAGCATaGCCTTCCCATGTCCGTGTG +
Preference number: 5 (lower is better)
Translates to: GGFWETLTHSPPTPDPTNTGSIA*PSHVRV
Trigger: CACACGGACATGGGAAGGCAATGCTATGCTGCCCGT...ATTGGTTGGGTCGGGGGTAGGAGGGCTGTGCGTGAGCGTCTCCCAGAACCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS GCA 90 bp ATGTGGATCAGATCCCACTCTTCAGGAGTGGGCTCTGGTCGCTGCTaGAGTGATCGGATCATCTCCTCCTTCCGCCGCCGCTCCCGGTTC +
Preference number: 5 (lower is better)
Translates to: MWIRSHSSGVGSGRC*SDRIISSFRRRSRF
Trigger: GAACCGGGAGCGGCGGCGGAAGGAGGAGATGATCCGATCACTGCAGCAGCGACCAGAGCCCACTCCTGAAGAGTGGGATCTGATCCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000450525.7
ENST00000546243.5
ENST00000577637.1
ENST00000584985.5
CDS-3UTR CAA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCGGGGGCAAGCTGGGTTaGTGGGTCCCGGGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: QKARESGHVWPAEEGKVVGGKLG*WVPGCV
Trigger: CACACAGCCCGGGACCCACAAACCCAGCTTGCCCCC...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp GGCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTTACCCGCCTCAGCACTaGGCCTTTCACACCATGCCC +
Preference number: 5 (lower is better)
Translates to: GRGLGEGMALLLLPHRPSYPPQH*AFHTMP
Trigger: GGGCATGGTGTGAAAGGCCAAGTGCTGAGGCGGGTA...AGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp GGCACTCCTGAGTCGCCCTGGCTCCTCCCCTACCATGTGTACTCACTCACACATGCTTCCAGGTCCACCTaGTCTCCGTCCGGCATGGAG +
Preference number: 5 (lower is better)
Translates to: GTPESPWLLPYHVYSLTHASRST*SPSGME
Trigger: CTCCATGCCGGACGGAGACAAGGTGGACCTGGAAGC...ATGTGTGAGTGAGTACACATGGTAGGGGAGGAGCCAGGGCGACTCAGGAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CAA 90 bp GGCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGGCCCGAGCGGTCTGTaGACATTAGCAGCACAGCCT +
Preference number: 5 (lower is better)
Translates to: GRGLGEGMALLLLPHRPSGPSGL*TLAAQP
Trigger: AGGCTGTGCTGCTAATGTCAACAGACCGCTCGGGCC...AGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGTACCCGCCTCAGCACTaGGCCTTTCACACCATGCCC +
Preference number: 5 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRYPPQH*AFHTMP
Trigger: GGGCATGGTGTGAAAGGCCAAGTGCTGAGGCGGGTA...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp ACCCACATCAAGGCCATCCCCCTCATTAGCACCAATGGCCCCCAGGAGAGGGCCTCAATCAGCTTACGCTaGGCCACCCGCTTCGAGTCA +
Preference number: 5 (lower is better)
Translates to: THIKAIPLISTNGPQERASISLR*ATRFES
Trigger: TGACTCGAAGCGGGTGGCCAAGCGTAAGCTGATTGA...GGCCCTCTCCTGGGGGCCATTGGTGCTAATGAGGGGGATGGCCTTGATGTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CAA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGCTTCCAGGTCCACCTaGTCTCCGTCCGGCATGGAG +
Preference number: 5 (lower is better)
Translates to: GSAGVCVGAESIQGREEGASRST*SPSGME
Trigger: CTCCATGCCGGACGGAGACAAGGTGGACCTGGAAGC...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CAA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGACCCAGGCCGCCATTCTaGAGCTGCTCCCGCTTGACA +
Preference number: 5 (lower is better)
Translates to: GSAGVCVGAESIQGREEGPRPPF*SCSRLT
Trigger: TGTCAAGCGGGAGCAGCTCAAGAATGGCGGCCTGGG...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CAA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGCTGAAGAACCGGCCCTaGGAGACTTCCCGCTTCACC +
Preference number: 5 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRLKNRP*ETSRFT
Trigger: GGTGAAGCGGGAAGTCTCCAAGGGCCGGTTCTTCAG...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp GGGGGTGGCCAGGACCCTGTTGTGTTAACTCACAGCTCTGATCGGCAGCCCTACGGAACACCTGAACGATaGGGGAAGGACAGTGCCCTG +
Preference number: 5 (lower is better)
Translates to: GGGQDPVVLTHSSDRQPYGTPER*GKDSAL
Trigger: CAGGGCACTGTCCTTCCCCAATCGTTCAGGTGTTCC...GTAGGGCTGCCGATCAGAGCTGTGAGTTAACACAACAGGGTCCTGGCCACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS GCA 90 bp CTTCGGAGTCTTGTCCTGTCCAGAGATCCCTTGACAAATCGCCACTaGTGTCGGGGGCAGAGCTTCCTCAAGCTTCAGCTGCGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: LRSLVLSRDPLTNRH*CRGQSFLKLQLRGL
Trigger: CAGCCCTCGCAGCTGAAGCTTGAGGAAGCTCTGCCCCCGACAGCAGTGGCGATTTGTCAAGGGATCTCTGGACAGGACAAGACTCCGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394121.8
CDS-3UTR CAA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGTACCCGCCTCAGCACTaGGCCTTTCACACCATGCCC +
Preference number: 5 (lower is better)
Translates to: AVRVCVWELNLSKDERKEYPPQH*AFHTMP
Trigger: GGGCATGGTGTGAAAGGCCAAGTGCTGAGGCGGGTA...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CAA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGACGGCGATGCACTTCTaGAAGCGGCACAGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: AVRVCVWELNLSKDERKETAMHF*KRHSWH
Trigger: GTGCCAGCTGTGCCGCTTCAAGAAGTGCATCGCCGT...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CAA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGACGGCGATGCACTTCTaGAAGCGGCACAGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLTAMHF*KRHSWH
Trigger: GTGCCAGCTGTGCCGCTTCAAGAAGTGCATCGCCGT...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR CAA 90 bp GGCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTTCAATCAGCTTACGCTaGGCCACCCGCTTCGAGTCA +
Preference number: 5 (lower is better)
Translates to: GRGLGEGMALLLLPHRPSSISLR*ATRFES
Trigger: TGACTCGAAGCGGGTGGCCAAGCGTAAGCTGATTGA...AGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp CTGGCATCCAGCATGAGAGGTAGATGGAACTCAGCGGGCACGAGTGGCAGAAAGTTGAGCTGCTCCCGCTaGACAGCCATCTCCCCACTC +
Preference number: 5 (lower is better)
Translates to: LASSMRGRWNSAGTSGRKLSCSR*TAISPL
Trigger: GAGTGGGGAGATGGCTGTCAAGCGGGAGCAGCTCAA...CTTTCTGCCACTCGTGCCCGCTGAGTTCCATCTACCTCTCATGCTGGATGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CAA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGCCCAGGCCGCCATTCTaGAGCTGCTCCCGCTTGACA +
Preference number: 5 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWPRPPF*SCSRLT
Trigger: TGTCAAGCGGGAGCAGCTCAAGAATGGCGGCCTGGG...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp CTGGCATCCAGCATGAGAGGTAGATGGAACTCAGCGGGCACGAGTGGCAGAAAGGGCCCGAGCGGTCTGTaGACATTAGCAGCACAGCCT +
Preference number: 5 (lower is better)
Translates to: LASSMRGRWNSAGTSGRKGPSGL*TLAAQP
Trigger: AGGCTGTGCTGCTAATGTCAACAGACCGCTCGGGCC...CTTTCTGCCACTCGTGCCCGCTGAGTTCCATCTACCTCTCATGCTGGATGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CAA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGGCCCGAGCGGTCTGTaGACATTAGCAGCACAGCCT +
Preference number: 5 (lower is better)
Translates to: GSAGVCVGAESIQGREEGGPSGL*TLAAQP
Trigger: AGGCTGTGCTGCTAATGTCAACAGACCGCTCGGGCC...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS TCA 90 bp TGCTGGGGGAGTAGCTTCGGAGTCTTGTCCTGTCCAGAGATCCCTTaGCAAATCGCCACTGCTGTCGGGGGCAGAGCTTCCTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: CWGSSFGVLSCPEIP*QIATAVGGRASSSF
Trigger: GAAGCTTGAGGAAGCTCTGCCCCCGACAGCAGTGGCGATTTGTCAAGGGATCTCTGGACAGGACAAGACTCCGAAGCTACTCCCCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394121.8
CDS CCA 90 bp GATGGGCCTCTGTGGCAATGTGGATCAGATCCCACTCTTCAGGAGTaGGCTCTGGTCGCTGCTGCAGTGATCGGATCATCTCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: DGPLWQCGSDPTLQE*ALVAAAVIGSSPPS
Trigger: GGAAGGAGGAGATGATCCGATCACTGCAGCAGCGACCAGAGCCCACTCCTGAAGAGTGGGATCTGATCCACATTGCCACAGAGGCCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000450525.7
ENST00000546243.5
ENST00000577637.1
ENST00000584985.5
CDS CCA 90 bp TTCCGCCTCTGTTTCCAATGGCTGCCCTGGGCATTGGTGCTGCGATaGGCCTCTGTGGCAATGTGGATCAGATCCCACTCTTCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: FRLCFQWLPWALVLR*ASVAMWIRSHSSGV
Trigger: CACTCCTGAAGAGTGGGATCTGATCCACATTGCCACAGAGGCCCATCGCAGCACCAATGCCCAGGGCAGCCATTGGAAACAGAGGCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000450525.7
ENST00000546243.5
ENST00000577637.1
ENST00000584985.5
CDS-3UTR CAA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGTCAATCAGCTTACGCTaGGCCACCCGCTTCGAGTCA +
Preference number: 5 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRSISLR*ATRFES
Trigger: TGACTCGAAGCGGGTGGCCAAGCGTAAGCTGATTGA...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGCTTCCAGGTCCACCTaGTCTCCGTCCGGCATGGAG +
Preference number: 5 (lower is better)
Translates to: AEGTTQQKARESGHVWPAASRST*SPSGME
Trigger: CTCCATGCCGGACGGAGACAAGGTGGACCTGGAAGC...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp GGCACTCCTGAGTCGCCCTGGCTCCTCCCCTACCATGTGTACTCACTCACACATGCCGGGGTGATGATCTaGGTAAACTCGCTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: GTPESPWLLPYHVYSLTHAGVMI*VNSLKA
Trigger: AGCCTTCAGCGAGTTTACCAAGATCATCACCCCGGC...ATGTGTGAGTGAGTACACATGGTAGGGGAGGAGCCAGGGCGACTCAGGAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CAA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTGAGCTGCTCCCGCTaGACAGCCATCTCCCCACTC +
Preference number: 5 (lower is better)
Translates to: QKARESGHVWPAEEGKVVLSCSR*TAISPL
Trigger: GAGTGGGGAGATGGCTGTCAAGCGGGAGCAGCTCAA...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp AGGCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCCCAGGCCGCCATTCTaGAGCTGCTCCCGCTTGACA +
Preference number: 5 (lower is better)
Translates to: RQRELHSKKQGSLAMFGLPRPPF*SCSRLT
Trigger: TGTCAAGCGGGAGCAGCTCAAGAATGGCGGCCTGGG...CAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTCCCAGGCCGCCATTCTaGAGCTGCTCCCGCTTGACA +
Preference number: 5 (lower is better)
Translates to: AEGTTQQKARESGHVWPAPRPPF*SCSRLT
Trigger: TGTCAAGCGGGAGCAGCTCAAGAATGGCGGCCTGGG...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp CAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGGCCCGAGCGGTCTGTaGACATTAGCAGCACAGCCT +
Preference number: 5 (lower is better)
Translates to: QQKARESGHVWPAEEGKVGPSGL*TLAAQP
Trigger: AGGCTGTGCTGCTAATGTCAACAGACCGCTCGGGCC...CACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCGGCCCGAGCGGTCTGTaGACATTAGCAGCACAGCCT +
Preference number: 5 (lower is better)
Translates to: QKARESGHVWPAEEGKVVGPSGL*TLAAQP
Trigger: AGGCTGTGCTGCTAATGTCAACAGACCGCTCGGGCC...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp GCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTGCAGAAGTGCGGAATGTaGTGTTTGCGGTGGTTGACG +
Preference number: 5 (lower is better)
Translates to: AEAWEKVWHSFSFPIGLLQKCGM*CLRWLT
Trigger: CGTCAACCACCGCAAACACAACATTCCGCACTTCTG...CAGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp CAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGCTGAAGAACCGGCCCTaGGAGACTTCCCGCTTCACC +
Preference number: 5 (lower is better)
Translates to: QQKARESGHVWPAEEGKVLKNRP*ETSRFT
Trigger: GGTGAAGCGGGAAGTCTCCAAGGGCCGGTTCTTCAG...CACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp AGCACCCTCACCAGGAGGGCGAGAGGGGCTCAAGCCAAAGTCCCTGAATTAGAGAGCAAGTTCAGTTGTTaGCCCTGTCCCAGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: STLTRRARGAQAKVPELESKFSC*PCPRAG
Trigger: TCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCT...CTCTAATTCAGGGACTTTGGCTTGAGCCCCTCTCGCCCTCCTGGTGAGGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CAA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAAAGCCAAGCCGTTCTTaGCACCCAGGCATCTGGGGA +
Preference number: 5 (lower is better)
Translates to: LGSAGVCVGAESIQGREEKPSRS*HPGIWG
Trigger: TCCCCAGATGCCTGGGTGCAAAGAACGGCTTGGCTT...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CAA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGCTCCATCTGGTCAGTTaGTGGGGTGGGTACTCTGCC +
Preference number: 5 (lower is better)
Translates to: AVRVCVWELNLSKDERKELHLVS*WGGYSA
Trigger: GGCAGAGTACCCACCCCACAAACTGACCAGATGGAG...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS TCA 90 bp TCAGCAGCTTGGGCCAGAAGTGCGGAATGTTGTGTTTGCGGTGGTTaGCGTAGTGCTCGAACGCCAGCAGGTACGCCTCCTGACTCTTCT +
Preference number: 5 (lower is better)
Translates to: SAAWARSAECCVCGG*RSARTPAGTPPDSS
Trigger: AGAAGAGTCAGGAGGCGTACCTGCTGGCGTTCGAGCACTACGTCAACCACCGCAAACACAACATTCCGCACTTCTGGCCCAAGCTGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000450525.7
ENST00000546243.5
ENST00000584985.5
CDS GCA 90 bp GGAATTTCCGCCTCTGTTTCCAATGGCTGCCCTGGGCATTGGTGCTaGGATGGGCCTCTGTGGCAATGTGGATCAGATCCCACTCTTCAG +
Preference number: 5 (lower is better)
Translates to: GISASVSNGCPGHWC*DGPLWQCGSDPTLQ
Trigger: CTGAAGAGTGGGATCTGATCCACATTGCCACAGAGGCCCATCGCAGCACCAATGCCCAGGGCAGCCATTGGAAACAGAGGCGGAAATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000450525.7
ENST00000546243.5
ENST00000577637.1
ENST00000584985.5
CDS-3UTR CAA 90 bp GGCACTCCTGAGTCGCCCTGGCTCCTCCCCTACCATGTGTACTCACTCACACATAGTAGCTTCGGAGTCTaGTCCTGTCCAGAGATCCCT +
Preference number: 5 (lower is better)
Translates to: GTPESPWLLPYHVYSLTHSSFGV*SCPEIP
Trigger: AGGGATCTCTGGACAGGACAAGACTCCGAAGCTACT...ATGTGTGAGTGAGTACACATGGTAGGGGAGGAGCCAGGGCGACTCAGGAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CAA 90 bp AGGCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGTACCCGCCTCAGCACTaGGCCTTTCACACCATGCCC +
Preference number: 5 (lower is better)
Translates to: RQRELHSKKQGSLAMFGLYPPQH*AFHTMP
Trigger: GGGCATGGTGTGAAAGGCCAAGTGCTGAGGCGGGTA...CAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGACGGCGATGCACTTCTaGAAGCGGCACAGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRTAMHF*KRHSWH
Trigger: GTGCCAGCTGTGCCGCTTCAAGAAGTGCATCGCCGT...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAATCAATCAGCTTACGCTaGGCCACCCGCTTCGAGTCA +
Preference number: 5 (lower is better)
Translates to: LGSAGVCVGAESIQGREESISLR*ATRFES
Trigger: TGACTCGAAGCGGGTGGCCAAGCGTAAGCTGATTGA...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CAA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGGCCGGGGTGATGATCTaGGTAAACTCGCTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: AVRVCVWELNLSKDERKEAGVMI*VNSLKA
Trigger: AGCCTTCAGCGAGTTTACCAAGATCATCACCCCGGC...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CAA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGTTGAGCTGCTCCCGCTaGACAGCCATCTCCCCACTC +
Preference number: 5 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRLSCSR*TAISPL
Trigger: GAGTGGGGAGATGGCTGTCAAGCGGGAGCAGCTCAA...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTTTGAGCTGCTCCCGCTaGACAGCCATCTCCCCACTC +
Preference number: 5 (lower is better)
Translates to: VCVGAESIQGREEGEKGCLSCSR*TAISPL
Trigger: GAGTGGGGAGATGGCTGTCAAGCGGGAGCAGCTCAA...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CAA 90 bp CAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGTCTGCCGCTGCCCCCTaGTACAGAATCGAACTCTGC +
Preference number: 5 (lower is better)
Translates to: QQKARESGHVWPAEEGKVSAAAP*YRIELC
Trigger: GCAGAGTTCGATTCTGTACAAGGGGGCAGCGGCAGA...CACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000394121.8
CDS-3UTR CAA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTCTGAAGAACCGGCCCTaGGAGACTTCCCGCTTCACC +
Preference number: 5 (lower is better)
Translates to: AEGTTQQKARESGHVWPALKNRP*ETSRFT
Trigger: GGTGAAGCGGGAAGTCTCCAAGGGCCGGTTCTTCAG...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAACCTTCATCAGCAGCTaGGGCCAGAAGTGCGGAATG +
Preference number: 5 (lower is better)
Translates to: LGSAGVCVGAESIQGREETFISS*GQKCGM
Trigger: CATTCCGCACTTCTGGCCCAAGCTGCTGATGAAGGT...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CAA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAAGCAAGTTCAGTTGTTaGCCCTGTCCCAGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: LGSAGVCVGAESIQGREESKFSC*PCPRAG
Trigger: TCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCT...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CAA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAAGTAGCTTCGGAGTCTaGTCCTGTCCAGAGATCCCC +
Preference number: 5 (lower is better)
Translates to: GSAGVCVGAESIQGREEGSSFGV*SCPEIP
Trigger: GGGGATCTCTGGACAGGACAAGACTCCGAAGCTACT...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546243.5
CDS CCA 90 bp TACAGGAATTGCTCCTTGTCCAGAGAACCTCAGATGAGCCTGTACTaGGTGACCGGGGGAGCAGGTTTCCCTCCAGCACAGCATCACATC +
Preference number: 5 (lower is better)
Translates to: YRNCSLSREPQMSLY*VTGGAGFPPAQHHI
Trigger: GATGTGATGCTGTGCTGGAGGGAAACCTGCTCCCCCGGTCACCCAGTACAGGCTCATCTGAGGTTCTCTGGACAAGGAGCAATTCCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577637.1
CDS-3UTR CAA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGCACACTCCACCTTGCTaGGCTTCTGTTCCATTCACT +
Preference number: 5 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRHTPPC*ASVPFT
Trigger: AGTGAATGGAACAGAAGCCAAGCAAGGTGGAGTGTG...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGACCCACACTCCACCTaGCTTGGCTTCTGTTCCATT +
Preference number: 5 (lower is better)
Translates to: GSAGVCVGAESIQGREEGDPHST*LGFCSI
Trigger: AATGGAACAGAAGCCAAGCAAGGTGGAGTGTGGGTC...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CAA 90 bp CATAGCAAGTTCAGTTGTTTGCCCTGTCCCAGGGCTGGAGGTCTGAGGAGGGACGACCCACACTCCACCTaGCTTGGCTTCTGTTCCATT +
Preference number: 5 (lower is better)
Translates to: HSKFSCLPCPRAGGLRRDDPHST*LGFCSI
Trigger: AATGGAACAGAAGCCAAGCAAGGTGGAGTGTGGGTC...GTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CAA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGGCCGGGGTGATGATCTaGGTAAACTCGCTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWAGVMI*VNSLKA
Trigger: AGCCTTCAGCGAGTTTACCAAGATCATCACCCCGGC...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp TCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTTACGGGATGGGAGGAACATGGGCAGTTTTTaGGCAAAGTCCACCACACGG +
Preference number: 5 (lower is better)
Translates to: SGHVWPAEEGKVVLRDGRNMGSF*AKSTTR
Trigger: CCGTGTGGTGGACTTTGCCAAAAAACTGCCCATGTT...CCTCCCATCCCGTAAGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp ATAAATTTTAACCTCCAGAGGAGGAGCCAAGCCAAGCCGTTCTTTGCACCCAGGCCCAGGCCGCCATTCTaGAGCTGCTCCCGCTTGACA +
Preference number: 5 (lower is better)
Translates to: INFNLQRRSQAKPFFAPRPRPPF*SCSRLT
Trigger: TGTCAAGCGGGAGCAGCTCAAGAATGGCGGCCTGGG...CCTGGGTGCAAAGAACGGCTTGGCTTGGCTCCTCCTCTGGAGGTTAAAATTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CAA 90 bp CATAGCAAGTTCAGTTGTTTGCCCTGTCCCAGGGCTGGAGGTCTGAGGAGGGACAAGGCAGAGAGTGACTaGCCCAGTTCAAAGATGGCG +
Preference number: 5 (lower is better)
Translates to: HSKFSCLPCPRAGGLRRDKAESD*PSSKMA
Trigger: CGCCATCTTTGAACTGGGCAAGTCACTCTCTGCCTT...GTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CAA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAAAGGCAGAGAGTGACTaGCCCAGTTCAAAGATGGCG +
Preference number: 5 (lower is better)
Translates to: LGSAGVCVGAESIQGREEKAESD*PSSKMA
Trigger: CGCCATCTTTGAACTGGGCAAGTCACTCTCTGCCTT...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CAA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGAAGGCAGAGAGTGACTaGCCCAGTTCAAAGATGGCG +
Preference number: 5 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLKAESD*PSSKMA
Trigger: CGCCATCTTTGAACTGGGCAAGTCACTCTCTGCCTT...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR CAA 90 bp CATAGCAAGTTCAGTTGTTTGCCCTGTCCCAGGGCTGGAGGTCTGAGGAGGGACCAGAAGTGCGGAATGTaGTGTTTGCGGTGGTTGACG +
Preference number: 5 (lower is better)
Translates to: HSKFSCLPCPRAGGLRRDQKCGM*CLRWLT
Trigger: CGTCAACCACCGCAAACACAACATTCCGCACTTCTG...GTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CAA 90 bp CAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGTCCTTCATCAGCAGCTaGGGCCAGAAGTGCGGAATG +
Preference number: 5 (lower is better)
Translates to: QQKARESGHVWPAEEGKVSFISS*GQKCGM
Trigger: CATTCCGCACTTCTGGCCCAAGCTGCTGATGAAGGA...CACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000394121.8
CDS-3UTR CAA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCCTTCATCAGCAGCTaGGGCCAGAAGTGCGGAATG +
Preference number: 5 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWSFISS*GQKCGM
Trigger: CATTCCGCACTTCTGGCCCAAGCTGCTGATGAAGGA...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000394121.8
CDS-3UTR CAA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGCAGACACAGTCTAGCTaGGGAAACAGACTCATGCCC +
Preference number: 5 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLQTQSS*GNRLMP
Trigger: GGGCATGAGTCTGTTTCCCAAGCTAGACTGTGTCTG...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR CAA 90 bp AGGCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCCCTTCATCAGCAGCTaGGGCCAGAAGTGCGGAATG +
Preference number: 5 (lower is better)
Translates to: RQRELHSKKQGSLAMFGLPFISS*GQKCGM
Trigger: CATTCCGCACTTCTGGCCCAAGCTGCTGATGAAGGG...CAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584985.5
CDS-3UTR CAA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCAGTAGCTTCGGAGTCTaGTCCTGTCCAGAGATCCCT +
Preference number: 5 (lower is better)
Translates to: QKARESGHVWPAEEGKVVSSFGV*SCPEIP
Trigger: AGGGATCTCTGGACAGGACAAGACTCCGAAGCTACT...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGAGTAGCTTCGGAGTCTaGTCCTGTCCAGAGATCCCT +
Preference number: 5 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWSSFGV*SCPEIP
Trigger: AGGGATCTCTGGACAGGACAAGACTCCGAAGCTACT...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp CATAGCAAGTTCAGTTGTTTGCCCTGTCCCAGGGCTGGAGGTCTGAGGAGGGACCACACTCCACCTTGCTaGGCTTCTGTTCCATTCACT +
Preference number: 5 (lower is better)
Translates to: HSKFSCLPCPRAGGLRRDHTPPC*ASVPFT
Trigger: AGTGAATGGAACAGAAGCCAAGCAAGGTGGAGTGTG...GTCCCTCCTCAGACCTCCAGCCCTGGGACAGGGCAAACAACTGAACTTGCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CAA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCGACCCACACTCCACCTaGCTTGGCTTCTGTTCCATT +
Preference number: 5 (lower is better)
Translates to: QKARESGHVWPAEEGKVVDPHST*LGFCSI
Trigger: AATGGAACAGAAGCCAAGCAAGGTGGAGTGTGGGTC...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGGACCCACACTCCACCTaGCTTGGCTTCTGTTCCATT +
Preference number: 5 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWDPHST*LGFCSI
Trigger: AATGGAACAGAAGCCAAGCAAGGTGGAGTGTGGGTC...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTTCAATCAGCTTACGCTaGGCCACCCGCTTCGAGTCA +
Preference number: 5 (lower is better)
Translates to: AEGTTQQKARESGHVWPASISLR*ATRFES
Trigger: TGACTCGAAGCGGGTGGCCAAGCGTAAGCTGATTGA...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp AGGCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGGCCGGGGTGATGATCTaGGTAAACTCGCTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: RQRELHSKKQGSLAMFGLAGVMI*VNSLKA
Trigger: AGCCTTCAGCGAGTTTACCAAGATCATCACCCCGGC...CAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGGCCGGGGTGATGATCTaGGTAAACTCGCTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRAGVMI*VNSLKA
Trigger: AGCCTTCAGCGAGTTTACCAAGATCATCACCCCGGC...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGAACATGGGCAGTTTTTaGGCAAAGTCCACCACACGG +
Preference number: 5 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLNMGSF*AKSTTR
Trigger: CCGTGTGGTGGACTTTGCCAAAAAACTGCCCATGTT...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR CAA 90 bp GGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAAACATGGGCAGTTTTTaGGCAAAGTCCACCACACGG +
Preference number: 5 (lower is better)
Translates to: GSAGVCVGAESIQGREEGNMGSF*AKSTTR
Trigger: CCGTGTGGTGGACTTTGCCAAAAAACTGCCCATGTT...TCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CAA 90 bp GCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAACATGGGCAGTTTTTaGGCAAAGTCCACCACACGG +
Preference number: 5 (lower is better)
Translates to: AVRVCVWELNLSKDERKENMGSF*AKSTTR
Trigger: CCGTGTGGTGGACTTTGCCAAAAAACTGCCCATGTT...CTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CAA 90 bp CAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGAGGACAAGTAAGATGTaGCCAGGCAGAGAAAGGGGG +
Preference number: 5 (lower is better)
Translates to: QQKARESGHVWPAEEGKVRTSKM*PGRERG
Trigger: CCCCCTTTCTCTGCCTGGCAACATCTTACTTGTCCT...CACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR CAA 90 bp GGCAGAGGCCTGGGAGAAGGTATGGCACTCCTTCTCCTTCCCCATCGGCCTTCTTTACGTTTTTCATCCTaGTGGGGGTTCATTCCCTGT +
Preference number: 5 (lower is better)
Translates to: GRGLGEGMALLLLPHRPSLRFSS*WGFIPC
Trigger: ACAGGGAATGAACCCCCACAAGGATGAAAAACGTAA...AGAAGGCCGATGGGGAAGGAGAAGGAGTGCCATACCTTCTCCCAGGCCTCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394121.8
CDS-3UTR CAA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTACCTTCATCAGCAGCTaGGGCCAGAAGTGCGGAATG +
Preference number: 5 (lower is better)
Translates to: VCVGAESIQGREEGEKGCTFISS*GQKCGM
Trigger: CATTCCGCACTTCTGGCCCAAGCTGCTGATGAAGGT...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CAA 90 bp ATTTTAACCTCCAGAGGAGGAGCCAAGCCAAGCCGTTCTTTGCACCCAGGCATCTACGGTCAAGGTGGCTaGTCCCTTCTCAATCCTCCC +
Preference number: 5 (lower is better)
Translates to: ILTSRGGAKPSRSLHPGIYGQGG*SLLNPP
Trigger: GGGAGGATTGAGAAGGGACAAGCCACCTTGACCGTA...GATGCCTGGGTGCAAAGAACGGCTTGGCTTGGCTCCTCCTCTGGAGGTTAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CAA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAACCCTGGCCCTCTGATTaGTTCTGTTCCTGTCTCAAA +
Preference number: 5 (lower is better)
Translates to: LGSAGVCVGAESIQGREEPWPSD*FCSCLK
Trigger: TTTGAGACAGGAACAGAACAAATCAGAGGGCCAGGG...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CAA 90 bp AAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTAGTAGCTTCGGAGTCTaGTCCTGTCCAGAGATCCCT +
Preference number: 5 (lower is better)
Translates to: KKQGSLAMFGLLRKGRWSSSFGV*SCPEIP
Trigger: AGGGATCTCTGGACAGGACAAGACTCCGAAGCTACT...AGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp AAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTGACCCACACTCCACCTaGCTTGGCTTCTGTTCCATT +
Preference number: 5 (lower is better)
Translates to: KKQGSLAMFGLLRKGRWSDPHST*LGFCSI
Trigger: AATGGAACAGAAGCCAAGCAAGGTGGAGTGTGGGTC...AGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp AGACAGCAGACAGGTCAGGAATTCCACTGGGCCCCCAGGCGTGGTAGGAAGGTAGGTTTTCAGGGAACATaGGCCGTTCTTTCTTTTTCG +
Preference number: 5 (lower is better)
Translates to: RQQTGQEFHWAPRRGRKVGFQGT*AVLSFS
Trigger: CGAAAAAGAAAGAACGGCCAATGTTCCCTGAAAACC...TACCTTCCTACCACGCCTGGGGGCCCAGTGGAATTCCTGACCTGTCTGCTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CAA 90 bp AGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGAACATGGGCAGTTTTTaGGCAAAGTCCACCACACGG +
Preference number: 5 (lower is better)
Translates to: SKKQGSLAMFGLLRKGRWNMGSF*AKSTTR
Trigger: CCGTGTGGTGGACTTTGCCAAAAAACTGCCCATGTT...CCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGCAGAGAGTGACTaGCCCAGTTCAAAGATGGCG +
Preference number: 5 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRKAESD*PSSKMA
Trigger: CGCCATCTTTGAACTGGGCAAGTCACTCTCTGCCTT...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTAAGGCAGAGAGTGACTaGCCCAGTTCAAAGATGGCG +
Preference number: 5 (lower is better)
Translates to: AEGTTQQKARESGHVWPAKAESD*PSSKMA
Trigger: CGCCATCTTTGAACTGGGCAAGTCACTCTCTGCCTT...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp GCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTCAGAAGTGCGGAATGTaGTGTTTGCGGTGGTTGACG +
Preference number: 5 (lower is better)
Translates to: AEGTTQQKARESGHVWPAQKCGM*CLRWLT
Trigger: CGTCAACCACCGCAAACACAACATTCCGCACTTCTG...AGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp AGGCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGAGGACAAGTAAGATGTaGCCAGGCAGAGAAAGGGGG +
Preference number: 5 (lower is better)
Translates to: RQRELHSKKQGSLAMFGLRTSKM*PGRERG
Trigger: CCCCCTTTCTCTGCCTGGCAACATCTTACTTGTCCT...CAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR CAA 90 bp AGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGCAGACACAGTCTAGCTaGGGAAACAGACTCATGCCC +
Preference number: 5 (lower is better)
Translates to: RELHSKKQGSLAMFGLLRQTQSS*GNRLMP
Trigger: GGGCATGAGTCTGTTTCCCAAGCTAGACTGTGTCTG...CCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR CAA 90 bp CTGGCATCCAGCATGAGAGGTAGATGGAACTCAGCGGGCACGAGTGGCAGAAAGGTCTTCTCCCCTTGCTaGGTTTCCAAAGTGCAGTTA +
Preference number: 5 (lower is better)
Translates to: LASSMRGRWNSAGTSGRKVFSPC*VSKVQL
Trigger: TAACTGCACTTTGGAAACCAAGCAAGGGGAGAAGAC...CTTTCTGCCACTCGTGCCCGCTGAGTTCCATCTACCTCTCATGCTGGATGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CAA 90 bp AGGCAGAGGGAACTACACAGCAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCACACTCCACCTTGCTaGGCTTCTGTTCCATTCACT +
Preference number: 5 (lower is better)
Translates to: RQRELHSKKQGSLAMFGLHTPPC*ASVPFT
Trigger: AGTGAATGGAACAGAAGCCAAGCAAGGTGGAGTGTG...CAGGCCAAACATGGCCAGACTCCCTTGCTTTTTGCTGTGTAGTTCCCTCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp CTGGGCAGTGCGGGTGTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGTTTTCAGGGAACATaGGCCGTTCTTTCTTTTTCG +
Preference number: 5 (lower is better)
Translates to: LGSAGVCVGAESIQGREEGFQGT*AVLSFS
Trigger: CGAAAAAGAAAGAACGGCCAATGTTCCCTGAAAACC...TTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACACACCCGCACTGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450525.7
ENST00000546243.5
CDS-3UTR CAA 90 bp GGCCCTGCACCGGGCACTGGGGATACAGACATGATTCAGACACAGTCTAGCTTGGGTTTTCAGGGAACATaGGCCGTTCTTTCTTTTTCG +
Preference number: 5 (lower is better)
Translates to: GPAPGTGDTDMIQTQSSLGFQGT*AVLSFS
Trigger: CGAAAAAGAAAGAACGGCCAATGTTCCCTGAAAACC...CAAGCTAGACTGTGTCTGAATCATGTCTGTATCCCCAGTGCCCGGTGCAGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000584985.5
CDS-3UTR CAA 90 bp GCACATAACAGACATACTGATTGTCAACGTGGGGCAGGAGTAGGAGCCCCTCAACAGAAGTGCGGAATGTaGTGTTTGCGGTGGTTGACG +
Preference number: 5 (lower is better)
Translates to: AHNRHTDCQRGAGVGAPQQKCGM*CLRWLT
Trigger: CGTCAACCACCGCAAACACAACATTCCGCACTTCTG...TTGAGGGGCTCCTACTCCTGCCCCACGTTGACAATCAGTATGTCTGTTATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CAA 90 bp CAAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCGGTTTTCAGGGAACATaGGCCGTTCTTTCTTTTTCG +
Preference number: 5 (lower is better)
Translates to: QKARESGHVWPAEEGKVVGFQGT*AVLSFS
Trigger: CGAAAAAGAAAGAACGGCCAATGTTCCCTGAAAACC...GACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS-3UTR CAA 90 bp ATAAATTTTAACCTCCAGAGGAGGAGCCAAGCCAAGCCGTTCTTTGCACCCAGGCACACTCCACCTTGCTaGGCTTCTGTTCCATTCACT +
Preference number: 5 (lower is better)
Translates to: INFNLQRRSQAKPFFAPRHTPPC*ASVPFT
Trigger: AGTGAATGGAACAGAAGCCAAGCAAGGTGGAGTGTG...CCTGGGTGCAAAGAACGGCTTGGCTTGGCTCCTCCTCTGGAGGTTAAAATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS-3UTR CAA 90 bp AAAAAGCAAGGGAGTCTGGCCATGTTTGGCCTGCTGAGGAAGGGAAGGTGGTCTGGTTTTCAGGGAACATaGGCCGTTCTTTCTTTTTCG +
Preference number: 5 (lower is better)
Translates to: KKQGSLAMFGLLRKGRWSGFQGT*AVLSFS
Trigger: CGAAAAAGAAAGAACGGCCAATGTTCCCTGAAAACC...AGACCACCTTCCCTTCCTCAGCAGGCCAAACATGGCCAGACTCCCTTGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS TCA 90 bp TTCCGCAGTTCTCCCACTCCAGTTAAAGGAGGGGATAGGGTAGTATaGTATGGAAGCCAAAAGTATAAAGCAGAGCAGCTCTCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: FRSSPTPVKGGDRVV*YGSQKYKAEQLSGP
Trigger: AGGCCCTGAGAGCTGCTCTGCTTTATACTTTTGGCTTCCATATCATACTACCCTATCCCCTCCTTTAACTGGAGTGGGAGAACTGCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577288.5
CDS-3UTR CAA 90 bp GTGTGTGTGGGAGCTGAATCTATCCAAGGACGAGAGGAAGGAGAGAAGGGGTGTCTAGTTTTTCTTCATTaGTCTTCTCCCCTTGCTTGG +
Preference number: 5 (lower is better)
Translates to: VCVGAESIQGREEGEKGCLVFLH*SSPLAW
Trigger: CCAAGCAAGGGGAGAAGACAAATGAAGAAAAACTAG...ACACCCCTTCTCTCCTTCCTCTCGTCCTTGGATAGATTCAGCTCCCACACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450525.7
CDS CCA 72 bp TCCAGAGATCCCTCGGCGTGGCGCGCCGGACCGGGCTaGGCAGCGACGCGGGGGTCTCAGCGCCCCGTGCTG +
Preference number: 6 (lower is better)
Translates to: SRDPSAWRAGPG*AATRGSQRPVL
Trigger: CAGCACGGGGCGCTGAGACCCCCGCGTCGCTGCCCAGCCCGGTCCGGCGCGCCACGCCGAGGGATCTCTGGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000450525.7
ENST00000584985.5
CDS CAA 72 bp TCCCGGGCTGTGTGCTGGGGGAGTAGCTTCGGAGTCTaGTCCTGTCCAGAGATCCCTCGGCGTGGCGCGCCG +
Preference number: 6 (lower is better)
Translates to: SRAVCWGSSFGV*SCPEIPRRGAP
Trigger: CGGCGCGCCACGCCGAGGGATCTCTGGACAGGACAAGACTCCGAAGCTACTCCCCCAGCACACAGCCCGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000450525.7
ENST00000584985.5
CDS CCA 72 bp ACAACATGCATTCCGAGAAGCTGCTGTCCTTCCGGGTaGACGCCCAGTGACCCGCCCGGCCGGCCTTCTGCC +
Preference number: 6 (lower is better)
Translates to: TTCIPRSCCPSG*TPSDPPGRPSA
Trigger: GGCAGAAGGCCGGCCGGGCGGGTCACTGGGCGTCCACCCGGAAGGACAGCAGCTTCTCGGAATGCATGTTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000394121.8
CDS CAA 90 bp GCGTCGGAGACTACGCCCAGGCCGCCATTCTTGAGCTGCTCCCGCTaGACAGCCATCTCCCCACTCAGCGTCAGGGTGTCGCTCTCAGGG +
Preference number: 6 (lower is better)
Translates to: ASETTPRPPFLSCSR*TAISPLSVRVSLSG
Trigger: CCCTGAGAGCGACACCCTGACGCTGAGTGGGGAGATGGCTGTCAAGCGGGAGCAGCTCAAGAATGGCGGCCTGGGCGTAGTCTCCGACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000450525.7
ENST00000546243.5
ENST00000584985.5
CDS GCA 72 bp GCGTCGGAGACTACGCCCAGGCCGCCATTCTTGAGCTaGTCCCGCTTGACAGCCATCTCCCCACTCAGCGTC +
Preference number: 6 (lower is better)
Translates to: ASETTPRPPFLS*SRLTAISPLSV
Trigger: GACGCTGAGTGGGGAGATGGCTGTCAAGCGGGAGCAGCTCAAGAATGGCGGCCTGGGCGTAGTCTCCGACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000450525.7
ENST00000546243.5
ENST00000584985.5
CDS CCA 72 bp CCACAGACCGCTCGGGCATGGAGAATTCCGCTTCGGTaGAGCAGCTCCAGGAGACGCTGCTGCGGGCTCTTC +
Preference number: 6 (lower is better)
Translates to: PQTARAWRIPLR*SSSRRRCCGLF
Trigger: GAAGAGCCCGCAGCAGCGTCTCCTGGAGCTGCTCCACCGAAGCGGAATTCTCCATGCCCGAGCGGTCTGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS CAA 72 bp TCCCGGGCTGTGTGCTGGGGGAGTAGCTTCGGAGTCTaGTCCTGTCCAGAGATCCCCCGCATGCGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: SRAVCWGSSFGV*SCPEIPRMRRA
Trigger: GGCTCTGCGCATGCGGGGGATCTCTGGACAGGACAAGACTCCGAAGCTACTCCCCCAGCACACAGCCCGGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546243.5
CDS CAA 90 bp ACGCTGCTGCGGGCTCTTCGGGCTCTGGTGCTGAAGAACCGGCCCTaGGAGACTTCCCGCTTCACCAAGCTGCTGCTCAAGCTGCCGGAC +
Preference number: 6 (lower is better)
Translates to: TLLRALRALVLKNRP*ETSRFTKLLLKLPD
Trigger: GTCCGGCAGCTTGAGCAGCAGCTTGGTGAAGCGGGAAGTCTCCAAGGGCCGGTTCTTCAGCACCAGAGCCCGAAGAGCCCGCAGCAGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS TCA 72 bp ACCCCCTGCCACCCAGGCCCTAGGGCACAGCACCCATaGTACCCGCCTCAGCACTTGGCCTTTCACACCATG +
Preference number: 6 (lower is better)
Translates to: TPCHPGPRAQHP*YPPQHLAFHTM
Trigger: CATGGTGTGAAAGGCCAAGTGCTGAGGCGGGTATCATGGGTGCTGTGCCCTAGGGCCTGGGTGGCAGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000450525.7
ENST00000546243.5
ENST00000577288.5
ENST00000577486.1
ENST00000578218.5
ENST00000584985.5
ENST00000585047.5
CDS TCA 72 bp AGGAGACGCTGCTGCGGGCTCTTCGGGCTCTGGTGCTaGAGAACCGGCCCTTGGAGACTTCCCGCTTCACCA +
Preference number: 6 (lower is better)
Translates to: RRRCCGLFGLWC*RTGPWRLPASP
Trigger: TGGTGAAGCGGGAAGTCTCCAAGGGCCGGTTCTTCAGCACCAGAGCCCGAAGAGCCCGCAGCAGCGTCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS CCA 72 bp CCAGAGATCCCCCGCATGCGCAGAGCCACAGGGCTCTaGGTACCGTTCCAGGAGATATTCAGAGCCCTCCCC +
Preference number: 6 (lower is better)
Translates to: PEIPRMRRATGL*VPFQEIFRALP
Trigger: GGGGAGGGCTCTGAATATCTCCTGGAACGGTACCCAGAGCCCTGTGGCTCTGCGCATGCGGGGGATCTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546243.5
CDS CAA 72 bp ACTACGCCCAGGCCGCCATTCTTGAGCTGCTCCCGCTaGACAGCCATCTCCCCACTCAGCGTCAGGGTGTCG +
Preference number: 6 (lower is better)
Translates to: TTPRPPFLSCSR*TAISPLSVRVS
Trigger: CGACACCCTGACGCTGAGTGGGGAGATGGCTGTCAAGCGGGAGCAGCTCAAGAATGGCGGCCTGGGCGTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000450525.7
ENST00000546243.5
ENST00000584985.5
CDS CAA 90 bp TGGACGCCCAGTGACCCGCCCGGCCGGCCTTCTGCCGCTGCCCCCTaGTACAGAATCGAACTCTGCACTTCTCTCTCCTTCATCAGCAGC +
Preference number: 6 (lower is better)
Translates to: WTPSDPPGRPSAAAP*YRIELCTSLSFISS
Trigger: GCTGCTGATGAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGGCAGAAGGCCGGCCGGGCGGGTCACTGGGCGTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264637.8
ENST00000394121.8
CDS GCA 72 bp AGATCCCACTCTTCAGGAGTGGGCTCTGGTCGCTGCTaGAGTGATCGGATCATCTCCTCCTTCCGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: RSHSSGVGSGRC*SDRIISSFRRR
Trigger: GCGGCGGCGGAAGGAGGAGATGATCCGATCACTGCAGCAGCGACCAGAGCCCACTCCTGAAGAGTGGGATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000450525.7
ENST00000546243.5
ENST00000577637.1
ENST00000584985.5
CDS GCA 72 bp AGAACCGGCCCTTGGAGACTTCCCGCTTCACCAAGCTaGTGCTCAAGCTGCCGGACCTGCGGACCCTTCATC +
Preference number: 6 (lower is better)
Translates to: RTGPWRLPASPS*CSSCRTCGPFI
Trigger: GATGAAGGGTCCGCAGGTCCGGCAGCTTGAGCAGCAGCTTGGTGAAGCGGGAAGTCTCCAAGGGCCGGTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584985.5
CDS CAA 72 bp CGGGCTCTTCGGGCTCTGGTGCTGAAGAACCGGCCCTaGGAGACTTCCCGCTTCACCAAGCTGCTGCTCAAG +
Preference number: 6 (lower is better)
Translates to: RALRALVLKNRP*ETSRFTKLLLK
Trigger: CTTGAGCAGCAGCTTGGTGAAGCGGGAAGTCTCCAAGGGCCGGTTCTTCAGCACCAGAGCCCGAAGAGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS CCA 72 bp GGCTGCCCTGGGCATTGGTGCTGCGATGGGCCTCTGTaGCAATGTGGATCAGATCCCACTCTTCAGGAGTGG +
Preference number: 6 (lower is better)
Translates to: GCPGHWCCDGPL*QCGSDPTLQEW
Trigger: CCACTCCTGAAGAGTGGGATCTGATCCACATTGCCACAGAGGCCCATCGCAGCACCAATGCCCAGGGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000450525.7
ENST00000546243.5
ENST00000577637.1
ENST00000584985.5
CDS CCA 72 bp TCACTGCTGTCGTCTTCCCCACAGACCGCTCGGGCATaGAGAATTCCGCTTCGGTGGAGCAGCTCCAGGAGA +
Preference number: 6 (lower is better)
Translates to: SLLSSSPQTARA*RIPLRWSSSRR
Trigger: TCTCCTGGAGCTGCTCCACCGAAGCGGAATTCTCCATGCCCGAGCGGTCTGTGGGGAAGACGACAGCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000584985.5
CDS CAA 72 bp TCCCGGGCTGTGTGCTGGGGGAGTAGCTTCGGAGTCTaGTCCTGTCCAGAGATCCCTTTCCGCAGTTCTCCC +
Preference number: 6 (lower is better)
Translates to: SRAVCWGSSFGV*SCPEIPFRSSP
Trigger: GGGAGAACTGCGGAAAGGGATCTCTGGACAGGACAAGACTCCGAAGCTACTCCCCCAGCACACAGCCCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577288.5
CDS GCA 72 bp ATCAGATCCCACTCTTCAGGAGTGGGCTCTGGTCGCTaGTGCAGTGATCGGATCATCTCCTCCTTCCGCCGC +
Preference number: 6 (lower is better)
Translates to: IRSHSSGVGSGR*CSDRIISSFRR
Trigger: GCGGCGGAAGGAGGAGATGATCCGATCACTGCAGCAGCGACCAGAGCCCACTCCTGAAGAGTGGGATCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000450525.7
ENST00000546243.5
ENST00000577637.1
ENST00000584985.5
CDS CCA 72 bp TGCTCCTTGTCCAGAGAACCTCAGATGAGCCTGTACTaGGTGACCGGGGGAGCAGGTTTCCCTCCAGCACAG +
Preference number: 6 (lower is better)
Translates to: CSLSREPQMSLY*VTGGAGFPPAQ
Trigger: CTGTGCTGGAGGGAAACCTGCTCCCCCGGTCACCCAGTACAGGCTCATCTGAGGTTCTCTGGACAAGGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577637.1
CDS CCA 72 bp CAAGCTGCCGGACCTGCGGACCCTTCATCAGCAGCTTaGGCCAGAAGTGCGGAATGTTGTGTTTGCGGTGGT +
Preference number: 6 (lower is better)
Translates to: QAAGPADPSSAA*ARSAECCVCGG
Trigger: ACCACCGCAAACACAACATTCCGCACTTCTGGCCCAAGCTGCTGATGAAGGGTCCGCAGGTCCGGCAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584985.5
CDS TCA 72 bp TGGGCCAGAAGTGCGGAATGTTGTGTTTGCGGTGGTTaGCGTAGTGCTCGAACGCCAGCAGGTACGCCTCCT +
Preference number: 6 (lower is better)
Translates to: WARSAECCVCGG*RSARTPAGTPP
Trigger: AGGAGGCGTACCTGCTGGCGTTCGAGCACTACGTCAACCACCGCAAACACAACATTCCGCACTTCTGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000450525.7
ENST00000546243.5
ENST00000584985.5
CDS GCA 72 bp TCCGCCTCTGTTTCCAATGGCTGCCCTGGGCATTGGTaGTGCGATGGGCCTCTGTGGCAATGTGGATCAGAT +
Preference number: 6 (lower is better)
Translates to: SASVSNGCPGHW*CDGPLWQCGSD
Trigger: ATCTGATCCACATTGCCACAGAGGCCCATCGCAGCACCAATGCCCAGGGCAGCCATTGGAAACAGAGGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000450525.7
ENST00000546243.5
ENST00000577637.1
ENST00000584985.5
CDS CAA 72 bp TCTTCGCAAGGCAGCTCGGAGAACATGGGCAGTTTTTaGGCAAAGTCCACCACACGGGTGATGGCCGGGGTG +
Preference number: 6 (lower is better)
Translates to: SSQGSSENMGSF*AKSTTRVMAGV
Trigger: CACCCCGGCCATCACCCGTGTGGTGGACTTTGCCAAAAAACTGCCCATGTTCTCCGAGCTGCCTTGCGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000450525.7
ENST00000546243.5
ENST00000584985.5
CDS CAA 72 bp TCCCGGGCTGTGTGCTGGGGGAGTAGCTTCGGAGTCTaGTCCTGTCCAGAGATCCCAGTTGCTACATTGCAG +
Preference number: 6 (lower is better)
Translates to: SRAVCWGSSFGV*SCPEIPVATLQ
Trigger: CTGCAATGTAGCAACTGGGATCTCTGGACAGGACAAGACTCCGAAGCTACTCCCCCAGCACACAGCCCGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577486.1
CDS CAA 72 bp CTTCTGCCACTCACCTCGGAGAACATGGGCAGTTTTTaGGCAAAGTCCACCACACGGGTGATGGCCGGGGTG +
Preference number: 6 (lower is better)
Translates to: LLPLTSENMGSF*AKSTTRVMAGV
Trigger: CACCCCGGCCATCACCCGTGTGGTGGACTTTGCCAAAAAACTGCCCATGTTCTCCGAGGTGAGTGGCAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577637.1
CDS CAA 72 bp TCCCGGGCTGTGTGCTGGGGGAGTAGCTTCGGAGTCTaGTCCTGTCCAGAGATCCCTTATACATCGGGGAGA +
Preference number: 6 (lower is better)
Translates to: SRAVCWGSSFGV*SCPEIPYTSGR
Trigger: TCTCCCCGATGTATAAGGGATCTCTGGACAGGACAAGACTCCGAAGCTACTCCCCCAGCACACAGCCCGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578218.5
CDS TCA 72 bp AGTAGCTTCGGAGTCTTGTCCTGTCCAGAGATCCCTTaGCAAATCGCCACTGCTGTCGGGGGCAGAGCTTCC +
Preference number: 6 (lower is better)
Translates to: SSFGVLSCPEIP*QIATAVGGRAS
Trigger: GGAAGCTCTGCCCCCGACAGCAGTGGCGATTTGTCAAGGGATCTCTGGACAGGACAAGACTCCGAAGCTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394121.8
CDS GCA 72 bp CTTGTCCTGTCCAGAGATCCCTTGACAAATCGCCACTaGTGTCGGGGGCAGAGCTTCCTCAAGCTTCAGCTG +
Preference number: 6 (lower is better)
Translates to: LVLSRDPLTNRH*CRGQSFLKLQL
Trigger: CAGCTGAAGCTTGAGGAAGCTCTGCCCCCGACAGCAGTGGCGATTTGTCAAGGGATCTCTGGACAGGACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394121.8
CDS GCA 72 bp CCGGTAACTCACTGTGTGACCTTGACAAATCGCCACTaGTGTCGGGGGCAGAGCTTCCTCAAGCTTCAGCTG +
Preference number: 6 (lower is better)
Translates to: PVTHCVTLTNRH*CRGQSFLKLQL
Trigger: CAGCTGAAGCTTGAGGAAGCTCTGCCCCCGACAGCAGTGGCGATTTGTCAAGGTCACACAGTGAGTTACCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578218.5
CDS CCA 72 bp TGTTTCCAATGGCTGCCCTGGGCATTGGTGCTGCGATaGGCCTCTGTGGCAATGTGGATCAGATCCCACTCT +
Preference number: 6 (lower is better)
Translates to: CFQWLPWALVLR*ASVAMWIRSHS
Trigger: AGAGTGGGATCTGATCCACATTGCCACAGAGGCCCATCGCAGCACCAATGCCCAGGGCAGCCATTGGAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000450525.7
ENST00000546243.5
ENST00000577637.1
ENST00000584985.5
CDS CCA 72 bp ATTTCCGCCTCTGTTTCCAATGGCTGCCCTGGGCATTaGTGCTGCGATGGGCCTCTGTGGCAATGTGGATCA +
Preference number: 6 (lower is better)
Translates to: ISASVSNGCPGH*CCDGPLWQCGS
Trigger: TGATCCACATTGCCACAGAGGCCCATCGCAGCACCAATGCCCAGGGCAGCCATTGGAAACAGAGGCGGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000450525.7
ENST00000546243.5
ENST00000577637.1
ENST00000584985.5
CDS CAA 72 bp AATTTCCGCCTCTGTTTCCAATGGCTGCCCTGGGCATaGGTGCTGCGATGGGCCTCTGTGGCAATGTGGATC +
Preference number: 6 (lower is better)
Translates to: NFRLCFQWLPWA*VLRWASVAMWI
Trigger: GATCCACATTGCCACAGAGGCCCATCGCAGCACCAATGCCCAGGGCAGCCATTGGAAACAGAGGCGGAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000450525.7
ENST00000546243.5
ENST00000577637.1
ENST00000584985.5
CDS CAA 72 bp TCCCGGGCTGTGTGCTGGGGGAGTAGCTTCGGAGTCTaGTCCTGTCCAGAGATCCCTGCATTCATGGACATA +
Preference number: 6 (lower is better)
Translates to: SRAVCWGSSFGV*SCPEIPAFMDI
Trigger: TATGTCCATGAATGCAGGGATCTCTGGACAGGACAAGACTCCGAAGCTACTCCCCCAGCACACAGCCCGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585047.5
CDS CCA 72 bp CTGTGGCAATGTGGATCAGATCCCACTCTTCAGGAGTaGGCTCTGGTCGCTGCTGCAGTGATCGGATCATCT +
Preference number: 6 (lower is better)
Translates to: LWQCGSDPTLQE*ALVAAAVIGSS
Trigger: AGATGATCCGATCACTGCAGCAGCGACCAGAGCCCACTCCTGAAGAGTGGGATCTGATCCACATTGCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264637.8
ENST00000394121.8
ENST00000450525.7
ENST00000546243.5
ENST00000577637.1
ENST00000584985.5
CDS CCA 72 bp AACCACTGTGAACAGAGAGGCACAAGGTCTAACGCATaGCACCCTCCATCCCCTTTCCATAATGCTCCCGGA +
Preference number: 6 (lower is better)
Translates to: NHCEQRGTRSNA*HPPSPFHNAPG
Trigger: TCCGGGAGCATTATGGAAAGGGGATGGAGGGTGCCATGCGTTAGACCTTGTGCCTCTCTGTTCACAGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577637.1
CDS CAA 90 bp TCGGGGAGAAAGTCTAAACACCAAACGCTTGCAGGTGTAGTTTGTTaGGGAGTTCGGGTCCCTTCTCCGCCGGTAACTCACTGTGTGACC +
Preference number: 6 (lower is better)
Translates to: SGRKSKHQTLAGVVC*GVRVPSPPVTHCVT
Trigger: GGTCACACAGTGAGTTACCGGCGGAGAAGGGACCCGAACTCCCAAACAAACTACACCTGCAAGCGTTTGGTGTTTAGACTTTCTCCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578218.5
CDS TCA 72 bp TACAGGTTGGAGAAACCGAGGGCCATGGAGGCTAAATaGCTTCCCAAATCACCTAGCAGTTGGGCAGCACAA +
Preference number: 6 (lower is better)
Translates to: YRLEKPRAMEAK*LPKSPSSWAAQ
Trigger: TTGTGCTGCCCAACTGCTAGGTGATTTGGGAAGTCATTTAGCCTCCATGGCCCTCGGTTTCTCCAACCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577637.1
CDS CCA 72 bp TCCTGTCCAGAGATCCCAGTTGCTACATTGCAGACCTaGAGCAGTGCCAACCTAAGCCACCATGTTTATTTC +
Preference number: 6 (lower is better)
Translates to: SCPEIPVATLQT*SSANLSHHVYF
Trigger: GAAATAAACATGGTGGCTTAGGTTGGCACTGCTCCAGGTCTGCAATGTAGCAACTGGGATCTCTGGACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577486.1
CDS TCA 72 bp TCTCCCACTCCAGTTAAAGGAGGGGATAGGGTAGTATaGTATGGAAGCCAAAAGTATAAAGCAGAGCAGCTC +
Preference number: 6 (lower is better)
Translates to: SPTPVKGGDRVV*YGSQKYKAEQL
Trigger: GAGCTGCTCTGCTTTATACTTTTGGCTTCCATATCATACTACCCTATCCCCTCCTTTAACTGGAGTGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577288.5
CDS CAA 72 bp CTGTGTATGTTATCTGTGTATGTTGACCTACAGGAATaGCTCCTTGTCCAGAGAACCTCAGATGAGCCTGTA +
Preference number: 6 (lower is better)
Translates to: LCMLSVYVDLQE*LLVQRTSDEPV
Trigger: TACAGGCTCATCTGAGGTTCTCTGGACAAGGAGCAATTCCTGTAGGTCAACATACACAGATAACATACACAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577637.1