Pregenerated sensors for THOC1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000263884Ensembl transcript IDs: ENST00000581677.1
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCTCACCCCAAAGGCTACCCAAGAACCCCGAGTAGGCTGTTTGGCTaGCTCAGGCGCCCAACGCCCACCCGAACTGAGTCGCTAGGGAAA | + |
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Preference number: 5 (lower is better) Translates to: PHPKGYPRTPSRLFG*LRRPTPTRTESLGK Trigger: TTTCCCTAGCGACTCAGTTCGGGTGGGCGTTGGGCGCCTGAGTCAGCCAAACAGCCTACTCGGGGTTCTTGGGTAGCCTTTGGGGTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS GCA 90 bp | AGGAGTTACAGCCTGCAAGGTGGCCATTCTGCAGGCTGGGAAGCATaGCTCCAGCCAAGACCACATACAGACACTTCAGAGGAGGAGTTG | + |
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Preference number: 5 (lower is better) Translates to: RSYSLQGGHSAGWEA*LQPRPHTDTSEEEL Trigger: CAACTCCTCCTCTGAAGTGTCTGTATGTGGTCTTGGCTGGAGGCATGCTTCCCAGCCTGCAGAATGGCCACCTTGCAGGCTGTAACTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS GCA 90 bp | GACTTTGTTTCTTATAAGGAGTTACAGCCTGCAAGGTGGCCATTCTaGAGGCTGGGAAGCATGCCTCCAGCCAAGACCACATACAGACAC | + |
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Preference number: 5 (lower is better) Translates to: DFVSYKELQPARWPF*RLGSMPPAKTTYRH Trigger: GTGTCTGTATGTGGTCTTGGCTGGAGGCATGCTTCCCAGCCTGCAGAATGGCCACCTTGCAGGCTGTAACTCCTTATAAGAAACAAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS CCA 90 bp | TTTCTTATAAGGAGTTACAGCCTGCAAGGTGGCCATTCTGCAGGCTaGGAAGCATGCCTCCAGCCAAGACCACATACAGACACTTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: FLIRSYSLQGGHSAG*EACLQPRPHTDTSE Trigger: CTCTGAAGTGTCTGTATGTGGTCTTGGCTGGAGGCATGCTTCCCAGCCTGCAGAATGGCCACCTTGCAGGCTGTAACTCCTTATAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS CCA 90 bp | AAAAGGAGAGACTTTGTTTCTTATAAGGAGTTACAGCCTGCAAGGTaGCCATTCTGCAGGCTGGGAAGCATGCCTCCAGCCAAGACCACA | + |
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Preference number: 5 (lower is better) Translates to: KRRDFVSYKELQPAR*PFCRLGSMPPAKTT Trigger: TGTGGTCTTGGCTGGAGGCATGCTTCCCAGCCTGCAGAATGGCCACCTTGCAGGCTGTAACTCCTTATAAGAAACAAAGTCTCTCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS CCA 90 bp | CATGCCTCCAGCCAAGACCACATACAGACACTTCAGAGGAGGAGTTaGAGTAGGAACTTTATGCTTAACTGGTTGGCTAAACATACATAT | + |
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Preference number: 5 (lower is better) Translates to: HASSQDHIQTLQRRS*SRNFMLNWLAKHTY Trigger: ATATGTATGTTTAGCCAACCAGTTAAGCATAAAGTTCCTACTCCAACTCCTCCTCTGAAGTGTCTGTATGTGGTCTTGGCTGGAGGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS TCA 90 bp | GATTTTAAATTTACAGACTTCGAAGAAGGGAACAAGATACACGTGTaGGGGAATAAGAGGAAGTTACCCGAGTCTGAGTCAGTGCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: DFKFTDFEEGNKIHV*GNKRKLPESESVLP Trigger: AGGAAGCACTGACTCAGACTCGGGTAACTTCCTCTTATTCCCTCACACGTGTATCTTGTTCCCTTCTTCGAAGTCTGTAAATTTAAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS CCA 90 bp | CACTTCAGAGGAGGAGTTGGAGTAGGAACTTTATGCTTAACTGGTTaGCTAAACATACATATTCAACAAGTTAGAGGAGCGGCTATGAAT | + |
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Preference number: 5 (lower is better) Translates to: HFRGGVGVGTLCLTG*LNIHIQQVRGAAMN Trigger: ATTCATAGCCGCTCCTCTAACTTGTTGAATATGTATGTTTAGCCAACCAGTTAAGCATAAAGTTCCTACTCCAACTCCTCCTCTGAAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS GCA 90 bp | ACCACATACAGACACTTCAGAGGAGGAGTTGGAGTAGGAACTTTATaGTTAACTGGTTGGCTAAACATACATATTCAACAAGTTAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: TTYRHFRGGVGVGTL*LTGWLNIHIQQVRG Trigger: TCCTCTAACTTGTTGAATATGTATGTTTAGCCAACCAGTTAAGCATAAAGTTCCTACTCCAACTCCTCCTCTGAAGTGTCTGTATGTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS TCA 72 bp | AAAGGCTACCCAAGAACCCCGAGTAGGCTGTTTGGCTaGCTCAGGCGCCCAACGCCCACCCGAACTGAGTCG | + |
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Preference number: 6 (lower is better) Translates to: KGYPRTPSRLFG*LRRPTPTRTES Trigger: CGACTCAGTTCGGGTGGGCGTTGGGCGCCTGAGTCAGCCAAACAGCCTACTCGGGGTTCTTGGGTAGCCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS GCA 72 bp | CGCAGCGCCACCCGTTTTCCAATCAGCGCCGGGCACTaGATTCCTCCTAGGTCTCTTTCTTTCAGTAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: RSATRFPISAGH*IPPRSLSFSRD Trigger: GTCTCTACTGAAAGAAAGAGACCTAGGAGGAATGCAGTGCCCGGCGCTGATTGGAAAACGGGTGGCGCTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS GCA 72 bp | AGCCTGCAAGGTGGCCATTCTGCAGGCTGGGAAGCATaGCTCCAGCCAAGACCACATACAGACACTTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: SLQGGHSAGWEA*LQPRPHTDTSE Trigger: CTCTGAAGTGTCTGTATGTGGTCTTGGCTGGAGGCATGCTTCCCAGCCTGCAGAATGGCCACCTTGCAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS CCA 72 bp | AGGAGTTACAGCCTGCAAGGTGGCCATTCTGCAGGCTaGGAAGCATGCCTCCAGCCAAGACCACATACAGAC | + |
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Preference number: 6 (lower is better) Translates to: RSYSLQGGHSAG*EACLQPRPHTD Trigger: GTCTGTATGTGGTCTTGGCTGGAGGCATGCTTCCCAGCCTGCAGAATGGCCACCTTGCAGGCTGTAACTCCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS TCA 72 bp | TTCACCATGTTTGCCATACCTCAGGTGATCCACTCCTaGCCTCAGGTGACCCACCTGCTTCGGCGTCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: FTMFAIPQVIHS*PQVTHLLRRPK Trigger: TTTGGGACGCCGAAGCAGGTGGGTCACCTGAGGTCAGGAGTGGATCACCTGAGGTATGGCAAACATGGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS CCA 72 bp | GTAACTGAAATCAATAAAAGCTGTAGTTACGGCTGGTaGGAGAGGGTTGTTAGTGTCTGGTGGTCGATGAAC | + |
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Preference number: 6 (lower is better) Translates to: VTEINKSCSYGW*ERVVSVWWSMN Trigger: GTTCATCGACCACCAGACACTAACAACCCTCTCCCACCAGCCGTAACTACAGCTTTTATTGATTTCAGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS CAA 72 bp | CCCTTGCTTGGCATGGGCTTAGGTCCTGTTTATACTTaGGTATCTTATTGCCATGGAGTCAATTCCGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: PLLGMGLGPVYT*VSYCHGVNSVS Trigger: ACTGACGGAATTGACTCCATGGCAATAAGATACCAAAGTATAAACAGGACCTAAGCCCATGCCAAGCAAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS TCA 72 bp | TTTACAGACTTCGAAGAAGGGAACAAGATACACGTGTaGGGGAATAAGAGGAAGTTACCCGAGTCTGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: FTDFEEGNKIHV*GNKRKLPESES Trigger: TGACTCAGACTCGGGTAACTTCCTCTTATTCCCTCACACGTGTATCTTGTTCCCTTCTTCGAAGTCTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS CCA 72 bp | AAAGTAACTGAAATCAATAAAAGCTGTAGTTACGGCTaGTGGGAGAGGGTTGTTAGTGTCTGGTGGTCGATG | + |
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Preference number: 6 (lower is better) Translates to: KVTEINKSCSYG*WERVVSVWWSM Trigger: CATCGACCACCAGACACTAACAACCCTCTCCCACCAGCCGTAACTACAGCTTTTATTGATTTCAGTTACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS GCA 72 bp | ATGGGCTTAGGTCCTGTTTATACTTTGGTATCTTATTaGCATGGAGTCAATTCCGTCAGTCCTATCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: MGLGPVYTLVSY*HGVNSVSPIIS Trigger: GGAGATGATAGGACTGACGGAATTGACTCCATGGCAATAAGATACCAAAGTATAAACAGGACCTAAGCCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS CAA 72 bp | CATGGGCTTAGGTCCTGTTTATACTTTGGTATCTTATaGCCATGGAGTCAATTCCGTCAGTCCTATCATCTC | + |
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Preference number: 6 (lower is better) Translates to: HGLRSCLYFGIL*PWSQFRQSYHL Trigger: GAGATGATAGGACTGACGGAATTGACTCCATGGCAATAAGATACCAAAGTATAAACAGGACCTAAGCCCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS CCA 72 bp | GGAGGAGTTGGAGTAGGAACTTTATGCTTAACTGGTTaGCTAAACATACATATTCAACAAGTTAGAGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: GGVGVGTLCLTG*LNIHIQQVRGA Trigger: CGCTCCTCTAACTTGTTGAATATGTATGTTTAGCCAACCAGTTAAGCATAAAGTTCCTACTCCAACTCCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS CCA 72 bp | CTTAGGTCCTGTTTATACTTTGGTATCTTATTGCCATaGAGTCAATTCCGTCAGTCCTATCATCTCCGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LRSCLYFGILLP*SQFRQSYHLRF Trigger: AAAACGGAGATGATAGGACTGACGGAATTGACTCCATGGCAATAAGATACCAAAGTATAAACAGGACCTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS GCA 72 bp | AGACACTTCAGAGGAGGAGTTGGAGTAGGAACTTTATaGTTAACTGGTTGGCTAAACATACATATTCAACAA | + |
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Preference number: 6 (lower is better) Translates to: RHFRGGVGVGTL*LTGWLNIHIQQ Trigger: TTGTTGAATATGTATGTTTAGCCAACCAGTTAAGCATAAAGTTCCTACTCCAACTCCTCCTCTGAAGTGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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| CDS GCA 72 bp | AATAAATACTACTTACATTGCTTTACAGTTCACACTTaGGGTCATTATTTCAGTGGAGCTTTTCAACAGCTC | + |
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Preference number: 6 (lower is better) Translates to: NKYYLHCFTVHT*GHYFSGAFQQL Trigger: GAGCTGTTGAAAAGCTCCACTGAAATAATGACCGCAAGTGTGAACTGTAAAGCAATGTAAGTAGTATTTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581677.1 |
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