RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for THEG (Homo sapiens)

Ensembl gene IDs: ENSG00000105549

Ensembl transcript IDs: ENST00000342640.9, ENST00000346878.3, ENST00000528213.1, ENST00000530711.3

Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCCAGGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTaGCTGAGGGTGTTTACTGGGAGCGGAGGTCTTAGAGGCCAGGCC +
Preference number: 1 (lower is better)
Translates to: LQAKKLRIITYTGLG*LRVFTGSGGLRGQA
Trigger: GGCCTGGCCTCTAAGACCTCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530711.3
3UTR CCA 90 bp AGGCGCTCGAGATGGTCAATGAAAGTGACTCGGAAAATAAACAGCTaGACAAGTCGCAGGTTGGATGCAAAAATAAATATTATTGTCCTC +
Preference number: 1 (lower is better)
Translates to: RRSRWSMKVTRKINS*TSRRLDAKINIIVL
Trigger: GAGGACAATAATATTTATTTTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTTCATTGACCATCTCGAGCGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
3UTR-3UTR TCA 90 bp CCCGTGGGCCCTCAGGAATGGACGAATAAGTCTGGACTGAAGAGATTCAGAAGGCGAATAAGTCTGGACTaGAGAGATTCAGAAGGCGCT +
Preference number: 2 (lower is better)
Translates to: PVGPQEWTNKSGLKRFRRRISLD*RDSEGA
Trigger: AGCGCCTTCTGAATCTCTTCAGTCCAGACTTATTCG...CCTTCTGAATCTCTTCAGTCCAGACTTATTCGTCCATTCCTGAGGGCCCACGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
3UTR-3UTR CCA 90 bp AAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAAAAATATCCTCATCCTTCTTTTaGCCTTCTAGCCCGCCCTCC +
Preference number: 2 (lower is better)
Translates to: KVTRKINSWTSRRLDAKISSSFF*PSSPPS
Trigger: GGAGGGCGGGCTAGAAGGCCAAAAGAAGGATGAGGA...TATTTTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
3UTR CCA 72 bp GTGTTTACTGGGAGCGGAGGTCTTAGAGGCCAGGCCTaGGTTGATCACACTTTTCTGGTGATGCTTTTGGGG +
Preference number: 3 (lower is better)
Translates to: VFTGSGGLRGQA*VDHTFLVMLLG
Trigger: CCCCAAAAGCATCACCAGAAAAGTGTGATCAACCCAGGCCTGGCCTCTAAGACCTCCGCTCCCAGTAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530711.3
3UTR GCA 72 bp AAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTaGCTGAGGGTGTTTACTGGGAGCGGAGGTCTTAGA +
Preference number: 3 (lower is better)
Translates to: KKLRIITYTGLG*LRVFTGSGGLR
Trigger: TCTAAGACCTCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR GCA 90 bp ATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAGGTCGGGGGTCGCCGTCCTaGTCCCTTTCCGACCTGCCC +
Preference number: 4 (lower is better)
Translates to: IITYTGLGCLRVFTGSGGRGSPS*SLSDLP
Trigger: GGGCAGGTCGGAAAGGGAGCAGGACGGCGACCCCCG...ACCTCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR TCA 90 bp ATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAGGTGGGCTGGTTCCCGAGTaGCCTTCGCCTGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: IITYTGLGCLRVFTGSGGGLVPE*PSPAVP
Trigger: GGGGACAGCAGGCGAAGGTCACTCGGGAACCAGCCC...ACCTCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR GCA 90 bp CCAGGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTCGGGGGTCGCCGTCCTaGTCCCTTTCCGACCTGCCC +
Preference number: 4 (lower is better)
Translates to: PGQKAQNNHIHRVRVPEGRGSPS*SLSDLP
Trigger: GGGCAGGTCGGAAAGGGAGCAGGACGGCGACCCCCG...ACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR GCA 90 bp CCCGTGGGCCCTCAGGAATGGACGAATAAGTCTGGACTGAAGAGATTCAGAAGGCCGCGAGCTGGGGACTaGCATTTGGGCTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PVGPQEWTNKSGLKRFRRPRAGD*HLGCPG
Trigger: TCCAGGGCAGCCCAAATGGCAGTCCCCAGCTCGCGG...CCTTCTGAATCTCTTCAGTCCAGACTTATTCGTCCATTCCTGAGGGCCCACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR GCA 90 bp CCCGTGGGCCCTCAGGAATGGACGAATAAGTCTGGACTGAAGAGATTCAGAAGGGCTTTCCCGCCCCGATaGGTTTGGGAGCCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: PVGPQEWTNKSGLKRFRRAFPPR*VWEPRE
Trigger: TTCTCTGGGCTCCCAAACGCATCGGGGCGGGAAAGC...CCTTCTGAATCTCTTCAGTCCAGACTTATTCGTCCATTCCTGAGGGCCCACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR CCA 90 bp GCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCCGCAGCCTCAGAGCTaGGCTGGTTCCCGAGTGACC +
Preference number: 4 (lower is better)
Translates to: AQNNHIHRVRVPEGVYWEPQPQS*AGSRVT
Trigger: GGTCACTCGGGAACCAGCCCAGCTCTGAGGCTGCGG...CTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp GCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGTCGTACACAGAGCTCTaGAGGCCACGGGGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: AQNNHIHRVRVPEGVYWESYTEL*RPRGSP
Trigger: CGGCGACCCCCGTGGCCTCCAGAGCTCTGTGTACGA...CTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp ACTGGGAGCGGAGGTCTTAGAGGCCAGGCCTGGGTTGATCACACTTTTCTGGTGGCTGCCCTGGATACCTaGGACACCTGTCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: TGSGGLRGQAWVDHTFLVAALDT*DTCLSG
Trigger: TCCTGAAAGACAGGTGTCCCAGGTATCCAGGGCAGC...CACCAGAAAAGTGTGATCAACCCAGGCCTGGCCTCTAAGACCTCCGCTCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR TCA 90 bp AAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGGGCTGGTTCCCGAGTaGCCTTCGCCTGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: KAQNNHIHRVRVPEGVYWGLVPE*PSPAVP
Trigger: GGGGACAGCAGGCGAAGGTCACTCGGGAACCAGCCC...CCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR TCA 90 bp AAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGGCGTTCGGGGTCTGTaGCCCGCCGGCTCTCGTACA +
Preference number: 4 (lower is better)
Translates to: KAQNNHIHRVRVPEGVYWGVRGL*PAGSRT
Trigger: TGTACGAGAGCCGGCGGGTCACAGACCCCGAACGCC...CCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR TCA 90 bp ACTGGGAGCGGAGGTCTTAGAGGCCAGGCCTGGGTTGATCACACTTTTCTGGTGGAGGCGGTTATGGTCTaGCACATGTGGCTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: TGSGGLRGQAWVDHTFLVEAVMV*HMWLGF
Trigger: AAACCCAAGCCACATGTGTCAGACCATAACCGCCTC...CACCAGAAAAGTGTGATCAACCCAGGCCTGGCCTCTAAGACCTCCGCTCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR TCA 90 bp CTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCCCCTCGAGGGGTCTCTaGGGGAGGACTTTGGCACCA +
Preference number: 4 (lower is better)
Translates to: LRIITYTGLGCLRVFTGSPSRGL*GRTLAP
Trigger: TGGTGCCAAAGTCCTCCCTCAGAGACCCCTCGAGGG...GCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR TCA 90 bp GCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGTGGGGAGCTTCTGGCTaGTGGACAGCCGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: AQNNHIHRVRVPEGVYWEWGASG*WTAGFG
Trigger: CCCAAAGCCGGCTGTCCATCAGCCAGAAGCTCCCCA...CTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR GCA 90 bp GGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTGCTCCCTTTCCGACCTaGCCGCAGCCTCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GQKAQNNHIHRVRVPEGVAPFPT*PQPQSW
Trigger: CCAGCTCTGAGGCTGCGGGCAGGTCGGAAAGGGAGC...AACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR GCA 90 bp ATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAGGTTGTCTGCACTCACCCTaGCCACCCGCCTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: IITYTGLGCLRVFTGSGGCLHSP*PPASPF
Trigger: GAAAGGAGAGGCGGGTGGGCAGGGTGAGTGCAGACA...ACCTCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR CCA 90 bp CCAGGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGCCTCAGAGCTGGGCTaGTTCCCGAGTGACCTTCGC +
Preference number: 4 (lower is better)
Translates to: PGQKAQNNHIHRVRVPEGASELG*FPSDLR
Trigger: GCGAAGGTCACTCGGGAACCAGCCCAGCTCTGAGGC...ACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp ATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAGGTGCATTGTCCAGGTCCTaGCGTTCGGGGTCTGTGACC +
Preference number: 4 (lower is better)
Translates to: IITYTGLGCLRVFTGSGGALSRS*RSGSVT
Trigger: GGTCACAGACCCCGAACGCCAGGACCTGGACAATGC...ACCTCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp CCAGGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGGGAGGACCGAGGAATaGGCCAGACAGGAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: PGQKAQNNHIHRVRVPEGGRTEE*ARQESS
Trigger: GGACGACTCCTGTCTGGCCCATTCCTCGGTCCTCCC...ACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp ATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAGGTCTGGGGACTGCCATTTaGGCTGCCCTGGATACCTGG +
Preference number: 4 (lower is better)
Translates to: IITYTGLGCLRVFTGSGGLGTAI*AALDTW
Trigger: CCAGGTATCCAGGGCAGCCCAAATGGCAGTCCCCAG...ACCTCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp CCAGGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGGAGGATCCGCGAGCTaGGGACTGCCATTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PGQKAQNNHIHRVRVPEGGGSAS*GLPFGL
Trigger: CAGCCCAAATGGCAGTCCCCAGCTCGCGGATCCTCC...ACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp AATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAGGTCTCTGACACATGTGGCTTaGGTTTTGGCACGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: NHIHRVRVPEGVYWERRSLTHVA*VLARGP
Trigger: GGGACCCCGTGCCAAAACCCAAGCCACATGTGTCAG...AGACCTCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR TCA 90 bp TCAATGAAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAGGCGTTCGGGGTCTGTaGCCCGCCGGCTCTCGTACA +
Preference number: 4 (lower is better)
Translates to: SMKVTRKINSWTSRRLDAGVRGL*PAGSRT
Trigger: TGTACGAGAGCCGGCGGGTCACAGACCCCGAACGCC...TGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTTCATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342640.9
CDS-3UTR TCA 90 bp AGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAACGCACTTGTCCGACTaGGCTTTGGGCCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: RIITYTGLGCLRVFTGSGTHLSD*ALGLAK
Trigger: CTTGGCCAGGCCCAAAGCTCAGTCGGACAAGTGCGT...TCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR GCA 90 bp AAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGCTCCCTTTCCGACCTaGCCGCAGCCTCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KAQNNHIHRVRVPEGVYWAPFPT*PQPQSW
Trigger: CCAGCTCTGAGGCTGCGGGCAGGTCGGAAAGGGAGC...CCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR GCA 90 bp CTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCCAAGCGCCTTTTGTCTaGACTCACCCTGCCCACCCG +
Preference number: 4 (lower is better)
Translates to: LRIITYTGLGCLRVFTGSQAPFV*THPAHP
Trigger: CGGGTGGGCAGGGTGAGTGCAGACAAAAGGCGCTTG...GCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR CCA 90 bp AGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAGCATTGTCCAGGTCCTaGCGTTCGGGGTCTGTGACC +
Preference number: 4 (lower is better)
Translates to: RIITYTGLGCLRVFTGSGALSRS*RSGSVT
Trigger: GGTCACAGACCCCGAACGCCAGGACCTGGACAATGC...TCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp CCAGGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGCTGCCCTGGATACCTaGGACACCTCAGACATGGGC +
Preference number: 4 (lower is better)
Translates to: PGQKAQNNHIHRVRVPEGAALDT*DTSDMG
Trigger: GCCCATGTCTGAGGTGTCCCAGGTATCCAGGGCAGC...ACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp GCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGGCTGCCCTGGATACCTaGGACACCTCAGACATGGGC +
Preference number: 4 (lower is better)
Translates to: AQNNHIHRVRVPEGVYWEAALDT*DTSDMG
Trigger: GCCCATGTCTGAGGTGTCCCAGGTATCCAGGGCAGC...CTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp AGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGACTGGGGACTGCCATTTaGGCTGCCCTGGATACCTGG +
Preference number: 4 (lower is better)
Translates to: RIITYTGLGCLRVFTGSGLGTAI*AALDTW
Trigger: CCAGGTATCCAGGGCAGCCCAAATGGCAGTCCCCAG...TCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp ATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAGGTACTGAGCTTTGGGCCTaGCCAAGTGAAGGAGGCGGT +
Preference number: 4 (lower is better)
Translates to: IITYTGLGCLRVFTGSGGTELWA*PSEGGG
Trigger: ACCGCCTCCTTCACTTGGCCAGGCCCAAAGCTCAGT...ACCTCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp AATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAGGTCTTCCTCATCCTTCTTTTaGCCTTCTAGCCCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: NHIHRVRVPEGVYWERRSSSSFF*PSSPPS
Trigger: GGAGGGCGGGCTAGAAGGCCAAAAGAAGGATGAGGA...AGACCTCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR TCA 90 bp CTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCTTGGGCCTGGCCAAGTaGAGGAGGCGGTTATGGTCT +
Preference number: 4 (lower is better)
Translates to: LRIITYTGLGCLRVFTGSLGLAK*RRRLWS
Trigger: AGACCATAACCGCCTCCTTCACTTGGCCAGGCCCAA...GCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR TCA 90 bp GGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTACGCACTTGTCCGACTaGGCTTTGGGCCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GQKAQNNHIHRVRVPEGVTHLSD*ALGLAK
Trigger: CTTGGCCAGGCCCAAAGCTCAGTCGGACAAGTGCGT...AACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR GCA 90 bp AGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGATTCTGGTCCCAGCTCTaGATTGTCCAGGTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: RIITYTGLGCLRVFTGSGFWSQL*IVQVLA
Trigger: CGCCAGGACCTGGACAATGCAGAGCTGGGACCAGAA...TCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR GCA 90 bp CAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACCCGCGAGCTGGGGACTaGCATTTGGGCTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: QKAQNNHIHRVRVPEGVYPRAGD*HLGCPG
Trigger: TCCAGGGCAGCCCAAATGGCAGTCCCCAGCTCGCGG...GTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR GCA 90 bp AATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAGGTCTTACACAGGGTTAGGGTaGCTGAGGGTGTTTACTGGG +
Preference number: 4 (lower is better)
Translates to: NHIHRVRVPEGVYWERRSYTGLG*LRVFTG
Trigger: CCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTA...AGACCTCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR CCA 90 bp AAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGCCTCAGAGCTGGGCTaGTTCCCGAGTGACCTTCGC +
Preference number: 4 (lower is better)
Translates to: KAQNNHIHRVRVPEGVYWASELG*FPSDLR
Trigger: GCGAAGGTCACTCGGGAACCAGCCCAGCTCTGAGGC...CCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp CTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGGAAGCTCCTCTTCTaGGTCTTCTGGTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LRIITYTGLGCLRVFTGSGKLLF*VFWSQL
Trigger: GAGCTGGGACCAGAAGACCCAGAAGAGGAGCTTCCC...GCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp AAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGTGCTGGGGAGCTTCTaGCTGATGGACAGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: KAQNNHIHRVRVPEGVYWVLGSF*LMDSRL
Trigger: CAGCCGGCTGTCCATCAGCCAGAAGCTCCCCAGCAC...CCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp AAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGGGAGGACCGAGGAATaGGCCAGACAGGAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: KAQNNHIHRVRVPEGVYWGRTEE*ARQESS
Trigger: GGACGACTCCTGTCTGGCCCATTCCTCGGTCCTCCC...CCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp CTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCTTCGGCTTTGACAACTaGAGGATCCGCGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LRIITYTGLGCLRVFTGSFGFDN*RIRELG
Trigger: CCCCAGCTCGCGGATCCTCCAGTTGTCAAAGCCGAA...GCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp AGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGATTCGGCTTTGACAACTaGAGGATCCGCGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RIITYTGLGCLRVFTGSGFGFDN*RIRELG
Trigger: CCCCAGCTCGCGGATCCTCCAGTTGTCAAAGCCGAA...TCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp GCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGACTCTTCCAAGAGGGTaGCTGGGGCCTTCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: AQNNHIHRVRVPEGVYWETLPRG*LGPSAL
Trigger: CAAAGCCGAAGGCCCCAGCCACCCTCTTGGAAGAGT...CTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp CTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCACTCTTCCAAGAGGGTaGCTGGGGCCTTCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LRIITYTGLGCLRVFTGSTLPRG*LGPSAL
Trigger: CAAAGCCGAAGGCCCCAGCCACCCTCTTGGAAGAGT...GCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp CTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCCTGACACATGTGGCTTaGGTTTTGGCACGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LRIITYTGLGCLRVFTGSLTHVA*VLARGP
Trigger: GGGACCCCGTGCCAAAACCCAAGCCACATGTGTCAG...GCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp AGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGACTGACACATGTGGCTTaGGTTTTGGCACGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RIITYTGLGCLRVFTGSGLTHVA*VLARGP
Trigger: GGGACCCCGTGCCAAAACCCAAGCCACATGTGTCAG...TCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp CCAGGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTACTGAGCTTTGGGCCTaGCCAAGTGAAGGAGGCGGT +
Preference number: 4 (lower is better)
Translates to: PGQKAQNNHIHRVRVPEGTELWA*PSEGGG
Trigger: ACCGCCTCCTTCACTTGGCCAGGCCCAAAGCTCAGT...ACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp CAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACCCGCCCCGATGCGTTTaGGAGCCCAGAGAAGCGTGG +
Preference number: 4 (lower is better)
Translates to: QKAQNNHIHRVRVPEGVYPPRCV*EPREAW
Trigger: CCACGCTTCTCTGGGCTCCCAAACGCATCGGGGCGG...GTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR CCA 90 bp GGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTGTGCTGGGGAGCTTCTaGCTGATGGACAGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: GQKAQNNHIHRVRVPEGVVLGSF*LMDSRL
Trigger: AAGCCGGCTGTCCATCAGCCAGAAGCTCCCCAGCAC...AACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR TCA 90 bp AAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGTGGGGCCTTCGGCTTTaGCAACTGGAGGATCCGCGA +
Preference number: 4 (lower is better)
Translates to: KAQNNHIHRVRVPEGVYWWGLRL*QLEDPR
Trigger: TCGCGGATCCTCCAGTTGTCAAAGCCGAAGGCCCCA...CCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR GCA 90 bp AAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTCCGCGAGCTGGGGACTaGCATTTGGGCTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: KKLRIITYTGLGCLRVFTPRAGD*HLGCPG
Trigger: TCCAGGGCAGCCCAAATGGCAGTCCCCAGCTCGCGG...AGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp AATGAAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAAACCGCAGCCTCAGAGCTaGGCTGGTTCCCGAGTGACC +
Preference number: 4 (lower is better)
Translates to: NESDSENKQLDKSQVGCKPQPQS*AGSRVT
Trigger: GGTCACTCGGGAACCAGCCCAGCTCTGAGGCTGCGG...TTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342640.9
CDS-3UTR CCA 90 bp ATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAGGTCTCTTCTGGGTCTTCTaGTCCCAGCTCTGCATTGTC +
Preference number: 4 (lower is better)
Translates to: IITYTGLGCLRVFTGSGGLFWVF*SQLCIV
Trigger: GACAATGCAGAGCTGGGACCAGAAGACCCAGAAGAG...ACCTCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp GGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTGGGAAGCTCCTCTTCTaGGTCTTCTGGTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GQKAQNNHIHRVRVPEGVGKLLF*VFWSQL
Trigger: GAGCTGGGACCAGAAGACCCAGAAGAGGAGCTTCCC...AACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp AGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGACAGAAAGTGCCTCTTTaGGATCCAGGGTCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: RIITYTGLGCLRVFTGSGQKVPL*DPGSPG
Trigger: TCCCGGAGACCCTGGATCCCAAAGAGGCACTTTCTG...TCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp GCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGTTGCTTTGGTCATGGTaGTGCTGGGGAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: AQNNHIHRVRVPEGVYWELLWSW*CWGASG
Trigger: GCCAGAAGCTCCCCAGCACCACCATGACCAAAGCAA...CTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp CCAGGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTTTGCTTTGGTCATGGTaGTGCTGGGGAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PGQKAQNNHIHRVRVPEGLLWSW*CWGASG
Trigger: GCCAGAAGCTCCCCAGCACCACCATGACCAAAGCAA...ACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp ATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAGGTTCCTCTTCCTTGCTTTaGTCATGGTGGTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: IITYTGLGCLRVFTGSGGSSSLL*SWWCWG
Trigger: TCCCCAGCACCACCATGACCAAAGCAAGGAAGAGGA...ACCTCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp CCCGTGGGCCCTCAGGAATGGACGAATAAGTCTGGACTGAAGAGATTCAGAAGGCAAGCTCATCTTACATaGGGAGATCCAGGCATACCC +
Preference number: 4 (lower is better)
Translates to: PVGPQEWTNKSGLKRFRRQAHLT*GDPGIP
Trigger: GGGTATGCCTGGATCTCCCCATGTAAGATGAGCTTG...CCTTCTGAATCTCTTCAGTCCAGACTTATTCGTCCATTCCTGAGGGCCCACGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342640.9
CDS-3UTR CCA 90 bp CAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACGGAGGATCCGCGAGCTaGGGACTGCCATTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QKAQNNHIHRVRVPEGVYGGSAS*GLPFGL
Trigger: CAGCCCAAATGGCAGTCCCCAGCTCGCGGATCCTCC...GTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp GGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTTCGGCTTTGACAACTaGAGGATCCGCGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GQKAQNNHIHRVRVPEGVFGFDN*RIRELG
Trigger: CCCCAGCTCGCGGATCCTCCAGTTGTCAAAGCCGAA...AACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp CTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCATGTGGCTTGGGTTTTaGCACGGGGTCCCACTCTTC +
Preference number: 4 (lower is better)
Translates to: LRIITYTGLGCLRVFTGSMWLGF*HGVPLF
Trigger: GAAGAGTGGGACCCCGTGCCAAAACCCAAGCCACAT...GCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp GCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGTCCTCATCCTTCTTTTaGCCTTCTAGCCCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: AQNNHIHRVRVPEGVYWESSSFF*PSSPPS
Trigger: GGAGGGCGGGCTAGAAGGCCAAAAGAAGGATGAGGA...CTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp CTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCTCCTCATCCTTCTTTTaGCCTTCTAGCCCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LRIITYTGLGCLRVFTGSSSSFF*PSSPPS
Trigger: GGAGGGCGGGCTAGAAGGCCAAAAGAAGGATGAGGA...GCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp ATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAGGTGTGGGCCCTCAGGAATaGACGAATAAGTCTGGACTG +
Preference number: 4 (lower is better)
Translates to: IITYTGLGCLRVFTGSGGVGPQE*TNKSGL
Trigger: CAGTCCAGACTTATTCGTCCATTCCTGAGGGCCCAC...ACCTCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR CCA 90 bp GGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTCCATTTGGGCTGCCCTaGATACCTGGGACACCTGTC +
Preference number: 4 (lower is better)
Translates to: GQKAQNNHIHRVRVPEGVPFGLP*IPGTPV
Trigger: GACAGGTGTCCCAGGTATCCAGGGCAGCCCAAATGG...AACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR TCA 90 bp AGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAGAGGCGGTTATGGTCTaGCACATGTGGCTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: RIITYTGLGCLRVFTGSGEAVMV*HMWLGF
Trigger: AAACCCAAGCCACATGTGTCAGACCATAACCGCCTC...TCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR TCA 90 bp AAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGTTGGGCCTGGCCAAGTaGAGGAGGCGGTTATGGTCT +
Preference number: 4 (lower is better)
Translates to: KAQNNHIHRVRVPEGVYWLGLAK*RRRLWS
Trigger: AGACCATAACCGCCTCCTTCACTTGGCCAGGCCCAA...CCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR TCA 90 bp CCAGGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGGGAGAATTCCACGTTaGAGTTGGAGCTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: PGQKAQNNHIHRVRVPEGGRIPR*SWSCFP
Trigger: GGGAAAGCAGCTCCAACTTCAACGTGGAATTCTCCC...ACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR GCA 90 bp TCAATGAAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCACGAGTGACCTTCGCCTaGTGTCCCCCATACACCGGT +
Preference number: 4 (lower is better)
Translates to: SMKVTRKINSWTSRRLDARVTFA*CPPYTG
Trigger: ACCGGTGTATGGGGGACAGCAGGCGAAGGTCACTCG...TGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTTCATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342640.9
CDS-3UTR GCA 90 bp GCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGGTTTATCTTGGGCTCTaGCAGCTCCATGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: AQNNHIHRVRVPEGVYWEVYLGL*QLHEPP
Trigger: AGGAGGCTCATGGAGCTGGCAGAGCCCAAGATAAAC...CTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR GCA 90 bp CCAGGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGAGAAGCGTGGGTCTTaGTCAAGCGCCTTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: PGQKAQNNHIHRVRVPEGEKRGS*SSAFCL
Trigger: CAGACAAAAGGCGCTTGAGCAAGACCCACGCTTCTC...ACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR CCA 90 bp GGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTCAGAAAGTGCCTCTTTaGGATCCAGGGTCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: GQKAQNNHIHRVRVPEGVQKVPL*DPGSPG
Trigger: TCCCGGAGACCCTGGATCCCAAAGAGGCACTTTCTG...AACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp AAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGTGCTGGGGAGCTTCTaGCTGATGGACAGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: KKLRIITYTGLGCLRVFTVLGSF*LMDSRL
Trigger: CAGCCGGCTGTCCATCAGCCAGAAGCTCCCCAGCAC...AGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp AGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGATCCTTGCTTTGGTCATaGTGGTGCTGGGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RIITYTGLGCLRVFTGSGSLLWS*WCWGAS
Trigger: AGAAGCTCCCCAGCACCACCATGACCAAAGCAAGGA...TCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp GCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGTCCTTGCTTTGGTCATaGTGGTGCTGGGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: AQNNHIHRVRVPEGVYWESLLWS*WCWGAS
Trigger: AGAAGCTCCCCAGCACCACCATGACCAAAGCAAGGA...CTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp ATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAGGTGGGACACCTCAGACATaGGCATGCTCCAGAAGTTAT +
Preference number: 4 (lower is better)
Translates to: IITYTGLGCLRVFTGSGGGTPQT*ACSRSY
Trigger: ATAACTTCTGGAGCATGCCCATGTCTGAGGTGTCCC...ACCTCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp GAAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAAAAATGGAGGATCCGCGAGCTaGGGACTGCCATTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: ESDSENKQLDKSQVGCKNGGSAS*GLPFGL
Trigger: CAGCCCAAATGGCAGTCCCCAGCTCGCGGATCCTCC...ATTTTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR CCA 90 bp ATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAGGTATGGACAGCCGGCTTTaGGAGAATTCCACGTTGAAG +
Preference number: 4 (lower is better)
Translates to: IITYTGLGCLRVFTGSGGMDSRL*ENSTLK
Trigger: CTTCAACGTGGAATTCTCCCAAAGCCGGCTGTCCAT...ACCTCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR TCA 90 bp CAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTTGGGCCTGGCCAAGTaGAGGAGGCGGTTATGGTCT +
Preference number: 4 (lower is better)
Translates to: QKAQNNHIHRVRVPEGVYLGLAK*RRRLWS
Trigger: AGACCATAACCGCCTCCTTCACTTGGCCAGGCCCAA...GTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR TCA 90 bp AAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTACGCACTTGTCCGACTaGGCTTTGGGCCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: KKLRIITYTGLGCLRVFTTHLSD*ALGLAK
Trigger: CTTGGCCAGGCCCAAAGCTCAGTCGGACAAGTGCGT...AGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR GCA 90 bp CAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTTCTGGTCCCAGCTCTaGATTGTCCAGGTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: QKAQNNHIHRVRVPEGVYFWSQL*IVQVLA
Trigger: CGCCAGGACCTGGACAATGCAGAGCTGGGACCAGAA...GTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR GCA 90 bp GGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTGTTTATCTTGGGCTCTaGCAGCTCCATGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GQKAQNNHIHRVRVPEGVVYLGL*QLHEPP
Trigger: AGGAGGCTCATGGAGCTGGCAGAGCCCAAGATAAAC...AACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR GCA 90 bp CAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACGACTGCCATTTGGGCTaGCCTGGATACCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: QKAQNNHIHRVRVPEGVYDCHLG*PGYLGH
Trigger: GTGTCCCAGGTATCCAGGGCAGCCCAAATGGCAGTC...GTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp GGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTCTCTTCTGGGTCTTCTaGTCCCAGCTCTGCATTGTC +
Preference number: 4 (lower is better)
Translates to: GQKAQNNHIHRVRVPEGVLFWVF*SQLCIV
Trigger: GACAATGCAGAGCTGGGACCAGAAGACCCAGAAGAG...AACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp GGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTCCAGGTAGAATCTCTTaGGCCGAGACAGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GQKAQNNHIHRVRVPEGVPGRIS*AETVPP
Trigger: TGGAGGAACTGTCTCGGCCCAAGAGATTCTACCTGG...AACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp CTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCCTTAGAGGCCAGGCCTaGGTTGATCACACTTTTCTG +
Preference number: 4 (lower is better)
Translates to: LRIITYTGLGCLRVFTGSLRGQA*VDHTFL
Trigger: CAGAAAAGTGTGATCAACCCAGGCCTGGCCTCTAAG...GCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp GCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGAGAAGGCGCTCGAGATaGTCAATGAAAGTGACTCGG +
Preference number: 4 (lower is better)
Translates to: AQNNHIHRVRVPEGVYWERRRSR*SMKVTR
Trigger: CCGAGTCACTTTCATTGACCATCTCGAGCGCCTTCT...CTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR CCA 90 bp CTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCAGAAGGCGCTCGAGATaGTCAATGAAAGTGACTCGG +
Preference number: 4 (lower is better)
Translates to: LRIITYTGLGCLRVFTGSRRRSR*SMKVTR
Trigger: CCGAGTCACTTTCATTGACCATCTCGAGCGCCTTCT...GCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR TCA 90 bp CCAGGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTCGAATAAGTCTGGACTaGAGAGATTCAGAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: PGQKAQNNHIHRVRVPEGRISLD*RDSEGA
Trigger: AGCGCCTTCTGAATCTCTTCAGTCCAGACTTATTCG...ACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR GCA 90 bp CTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCCCTCAGACATGGGCATaGTCCAGAAGTTATCACGAA +
Preference number: 4 (lower is better)
Translates to: LRIITYTGLGCLRVFTGSPQTWA*SRSYHE
Trigger: TTCGTGATAACTTCTGGAGCATGCCCATGTCTGAGG...GCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR GCA 90 bp AAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGACTGCCATTTGGGCTaGCCTGGATACCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: KKLRIITYTGLGCLRVFTDCHLG*PGYLGH
Trigger: GTGTCCCAGGTATCCAGGGCAGCCCAAATGGCAGTC...AGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp CAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTTGCTTTGGTCATGGTaGTGCTGGGGAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: QKAQNNHIHRVRVPEGVYLLWSW*CWGASG
Trigger: GCCAGAAGCTCCCCAGCACCACCATGACCAAAGCAA...GTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp AAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGTCCTCTTCCTTGCTTTaGTCATGGTGGTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KAQNNHIHRVRVPEGVYWSSSLL*SWWCWG
Trigger: TCCCCAGCACCACCATGACCAAAGCAAGGAAGAGGA...CCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp AAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGCCAGGTAGAATCTCTTaGGCCGAGACAGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KAQNNHIHRVRVPEGVYWPGRIS*AETVPP
Trigger: TGGAGGAACTGTCTCGGCCCAAGAGATTCTACCTGG...CCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp CAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACATGTGGCTTGGGTTTTaGCACGGGGTCCCACTCTTC +
Preference number: 4 (lower is better)
Translates to: QKAQNNHIHRVRVPEGVYMWLGF*HGVPLF
Trigger: GAAGAGTGGGACCCCGTGCCAAAACCCAAGCCACAT...GTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp AAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTACTGAGCTTTGGGCCTaGCCAAGTGAAGGAGGCGGT +
Preference number: 4 (lower is better)
Translates to: KKLRIITYTGLGCLRVFTTELWA*PSEGGG
Trigger: ACCGCCTCCTTCACTTGGCCAGGCCCAAAGCTCAGT...AGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR TCA 90 bp CAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACGAGGCGGTTATGGTCTaGCACATGTGGCTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: QKAQNNHIHRVRVPEGVYEAVMV*HMWLGF
Trigger: AAACCCAAGCCACATGTGTCAGACCATAACCGCCTC...GTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR GCA 90 bp AAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGCTCCAACTCAGAAAGTaGCTCTTTGGGATCCAGGGT +
Preference number: 4 (lower is better)
Translates to: KAQNNHIHRVRVPEGVYWLQLRK*LFGIQG
Trigger: ACCCTGGATCCCAAAGAGGCACTTTCTGAGTTGGAG...CCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR GCA 90 bp AAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAAAAATAGACTGCCATTTGGGCTaGCCTGGATACCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: KVTRKINSWTSRRLDAKIDCHLG*PGYLGH
Trigger: GTGTCCCAGGTATCCAGGGCAGCCCAAATGGCAGTC...TATTTTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR CCA 90 bp AAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAAAAATAACTCTTCCAAGAGGGTaGCTGGGGCCTTCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: KVTRKINSWTSRRLDAKITLPRG*LGPSAL
Trigger: CAAAGCCGAAGGCCCCAGCCACCCTCTTGGAAGAGT...TATTTTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR CCA 90 bp AAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAAAAATAGAGCCCAGAGAAGCGTaGGTCTTGCTCAAGCGCCTT +
Preference number: 4 (lower is better)
Translates to: KVTRKINSWTSRRLDAKIEPREA*VLLKRL
Trigger: AAGGCGCTTGAGCAAGACCCACGCTTCTCTGGGCTC...TATTTTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR TCA 90 bp AAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGCGAATAAGTCTGGACTaGAGAGATTCAGAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: KAQNNHIHRVRVPEGVYWRISLD*RDSEGA
Trigger: AGCGCCTTCTGAATCTCTTCAGTCCAGACTTATTCG...CCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR GCA 90 bp AAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGCCTCAGACATGGGCATaGTCCAGAAGTTATCACGAA +
Preference number: 4 (lower is better)
Translates to: KAQNNHIHRVRVPEGVYWPQTWA*SRSYHE
Trigger: TTCGTGATAACTTCTGGAGCATGCCCATGTCTGAGG...CCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR GCA 90 bp AATGAAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAAATACACAGGGTTAGGGTaGCTGAGGGTGTTTACTGGG +
Preference number: 4 (lower is better)
Translates to: NESDSENKQLDKSQVGCKYTGLG*LRVFTG
Trigger: CCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTA...TTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR GCA 90 bp AAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTTACACAGGGTTAGGGTaGCTGAGGGTGTTTACTGGG +
Preference number: 4 (lower is better)
Translates to: KKLRIITYTGLGCLRVFTYTGLG*LRVFTG
Trigger: CCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTA...AGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp CAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACGGGACACCTCAGACATaGGCATGCTCCAGAAGTTAT +
Preference number: 4 (lower is better)
Translates to: QKAQNNHIHRVRVPEGVYGTPQT*ACSRSY
Trigger: ATAACTTCTGGAGCATGCCCATGTCTGAGGTGTCCC...GTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CCA 90 bp AAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAAAAATAATGTGGCTTGGGTTTTaGCACGGGGTCCCACTCTTC +
Preference number: 4 (lower is better)
Translates to: KVTRKINSWTSRRLDAKIMWLGF*HGVPLF
Trigger: GAAGAGTGGGACCCCGTGCCAAAACCCAAGCCACAT...TATTTTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR CCA 90 bp CAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACCTTAGAGGCCAGGCCTaGGTTGATCACACTTTTCTG +
Preference number: 4 (lower is better)
Translates to: QKAQNNHIHRVRVPEGVYLRGQA*VDHTFL
Trigger: CAGAAAAGTGTGATCAACCCAGGCCTGGCCTCTAAG...GTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CCA 90 bp AATGAAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAAAGTGGGCCCTCAGGAATaGACGAATAAGTCTGGACTG +
Preference number: 4 (lower is better)
Translates to: NESDSENKQLDKSQVGCKVGPQE*TNKSGL
Trigger: CAGTCCAGACTTATTCGTCCATTCCTGAGGGCCCAC...TTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR GCA 90 bp AAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTCTCCAACTCAGAAAGTaGCTCTTTGGGATCCAGGGT +
Preference number: 4 (lower is better)
Translates to: KKLRIITYTGLGCLRVFTLQLRK*LFGIQG
Trigger: ACCCTGGATCCCAAAGAGGCACTTTCTGAGTTGGAG...AGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR GCA 90 bp AAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAAAAATAGTTTATCTTGGGCTCTaGCAGCTCCATGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: KVTRKINSWTSRRLDAKIVYLGL*QLHEPP
Trigger: AGGAGGCTCATGGAGCTGGCAGAGCCCAAGATAAAC...TATTTTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR CCA 90 bp AAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAAAAATATCCTCTTCCTTGCTTTaGTCATGGTGGTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KVTRKINSWTSRRLDAKISSSLL*SWWCWG
Trigger: TCCCCAGCACCACCATGACCAAAGCAAGGAAGAGGA...TATTTTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR CCA 90 bp AATGAAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAAACTTAGAGGCCAGGCCTaGGTTGATCACACTTTTCTG +
Preference number: 4 (lower is better)
Translates to: NESDSENKQLDKSQVGCKLRGQA*VDHTFL
Trigger: CAGAAAAGTGTGATCAACCCAGGCCTGGCCTCTAAG...TTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR GCA 90 bp CAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACCTGTCTTTCAGGACTTaGCAGTTTATCTTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QKAQNNHIHRVRVPEGVYLSFRT*QFILGS
Trigger: AGAGCCCAAGATAAACTGGCAAGTCCTGAAAGACAG...GTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR GCA 90 bp TCAATGAAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCACTGTCTTTCAGGACTTaGCAGTTTATCTTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SMKVTRKINSWTSRRLDALSFRT*QFILGS
Trigger: AGAGCCCAAGATAAACTGGCAAGTCCTGAAAGACAG...TGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTTCATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR CCA 90 bp TCAATGAAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCACGGAAAATAAACAGCTaGACAAGTCGCAGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: SMKVTRKINSWTSRRLDARKINS*TSRRLD
Trigger: ATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCG...TGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTTCATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR CCA 90 bp AAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTCGGAAAATAAACAGCTaGACAAGTCGCAGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: KKLRIITYTGLGCLRVFTRKINS*TSRRLD
Trigger: ATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCG...AGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS CCA 90 bp TGGCGTTCGGGGTCTGTGACCCGCCGGCTCTCGTACACAGAGCTCTaGAGGCCACGGGGGTCGCCGTCCTGCTCCCTTTCCGACCTGCCC +
Preference number: 5 (lower is better)
Translates to: WRSGSVTRRLSYTEL*RPRGSPSCSLSDLP
Trigger: GGGCAGGTCGGAAAGGGAGCAGGACGGCGACCCCCGTGGCCTCCAGAGCTCTGTGTACGAGAGCCGGCGGGTCACAGACCCCGAACGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS GCA 90 bp CGGCTCTCGTACACAGAGCTCTGGAGGCCACGGGGGTCGCCGTCCTaGTCCCTTTCCGACCTGCCCGCAGCCTCAGAGCTGGGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: RLSYTELWRPRGSPS*SLSDLPAASELGWF
Trigger: GAACCAGCCCAGCTCTGAGGCTGCGGGCAGGTCGGAAAGGGAGCAGGACGGCGACCCCCGTGGCCTCCAGAGCTCTGTGTACGAGAGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS GCA 90 bp AGACAGGGTCCGAGCCCCACTGCCTCTTGCCCTGGGTCTCCCGTTTaGTCCCAAACTCCTCACTCTCCTTTGGCCACCGCCCAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: RQGPSPTASCPGSPV*SQTPHSPLATAQRA
Trigger: GGCCCTCTGGGCGGTGGCCAAAGGAGAGTGAGGAGTTTGGGAGCAAACGGGAGACCCAGGGCAAGAGGCAGTGGGGCTCGGACCCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528213.1
CDS CCA 90 bp GGGTGGCTGGGGCCTTCGGCTTTGACAACTGGAGGATCCGCGAGCTaGGGACTGCCATTTGGGCTGCCCTGGATACCTGGGACACCTCAG +
Preference number: 5 (lower is better)
Translates to: GWLGPSALTTGGSAS*GLPFGLPWIPGTPQ
Trigger: CTGAGGTGTCCCAGGTATCCAGGGCAGCCCAAATGGCAGTCCCCAGCTCGCGGATCCTCCAGTTGTCAAAGCCGAAGGCCCCAGCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS CCA 90 bp GGGTGGCTGGGGCCTTCGGCTTTGACAACTGGAGGATCCGCGAGCTaGGGACTGCCATTTGGGCTGCCCTGGATACCTGGGACACCTGTC +
Preference number: 5 (lower is better)
Translates to: GWLGPSALTTGGSAS*GLPFGLPWIPGTPV
Trigger: GACAGGTGTCCCAGGTATCCAGGGCAGCCCAAATGGCAGTCCCCAGCTCGCGGATCCTCCAGTTGTCAAAGCCGAAGGCCCCAGCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS GCA 90 bp GCGTCCCTTCCTGCGAGGAGACAGGGTCCGAGCCCCACTGCCTCTTaGCCTGGGTCTCCCGTTTGCTCCCAAACTCCTCACTCTCCTTTG +
Preference number: 5 (lower is better)
Translates to: ASLPARRQGPSPTAS*PGSPVCSQTPHSPL
Trigger: CAAAGGAGAGTGAGGAGTTTGGGAGCAAACGGGAGACCCAGGGCAAGAGGCAGTGGGGCTCGGACCCTGTCTCCTCGCAGGAAGGGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528213.1
CDS GCA 90 bp TACCACAGCGTCCCTTCCTGCGAGGAGACAGGGTCCGAGCCCCACTaGCTCTTGCCCTGGGTCTCCCGTTTGCTCCCAAACTCCTCACTC +
Preference number: 5 (lower is better)
Translates to: YHSVPSCEETGSEPH*LLPWVSRLLPNSSL
Trigger: GAGTGAGGAGTTTGGGAGCAAACGGGAGACCCAGGGCAAGAGGCAGTGGGGCTCGGACCCTGTCTCCTCGCAGGAAGGGACGCTGTGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528213.1
CDS GCA 90 bp CTTTCCCGCCCCGATGCGTTTGGGAGCCCAGAGAAGCGTGGGTCTTaGTCAAGCGCCTTTTGTCTGCACTCACCCTGCCCACCCGCCTCT +
Preference number: 5 (lower is better)
Translates to: LSRPDAFGSPEKRGS*SSAFCLHSPCPPAS
Trigger: AGAGGCGGGTGGGCAGGGTGAGTGCAGACAAAAGGCGCTTGAGCAAGACCCACGCTTCTCTGGGCTCCCAAACGCATCGGGGCGGGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS CCA 90 bp CTTGCCCTGGGTCTCCCGTTTGCTCCCAAACTCCTCACTCTCCTTTaGCCACCGCCCAGAGGGCCACCGTTCCCTAGCCACTCCCAGTGT +
Preference number: 5 (lower is better)
Translates to: LALGLPFAPKLLTLL*PPPRGPPFPSHSQC
Trigger: ACACTGGGAGTGGCTAGGGAACGGTGGCCCTCTGGGCGGTGGCCAAAGGAGAGTGAGGAGTTTGGGAGCAAACGGGAGACCCAGGGCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528213.1
CDS CCA 90 bp GGAGCTGCTTTCCCGCCCCGATGCGTTTGGGAGCCCAGAGAAGCGTaGGTCTTGCTCAAGCGCCTTTTGTCTGCACTCACCCTGCCCACC +
Preference number: 5 (lower is better)
Translates to: GAAFPPRCVWEPREA*VLLKRLLSALTLPT
Trigger: GGTGGGCAGGGTGAGTGCAGACAAAAGGCGCTTGAGCAAGACCCACGCTTCTCTGGGCTCCCAAACGCATCGGGGCGGGAAAGCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS GCA 90 bp GAGAAGCGTGGGTCTTGCTCAAGCGCCTTTTGTCTGCACTCACCCTaGCCACCCGCCTCTCCTTTCCCTCGAGGGGTCTCTGAGGGAGGA +
Preference number: 5 (lower is better)
Translates to: EKRGSCSSAFCLHSP*PPASPFPRGVSEGG
Trigger: TCCTCCCTCAGAGACCCCTCGAGGGAAAGGAGAGGCGGGTGGGCAGGGTGAGTGCAGACAAAAGGCGCTTGAGCAAGACCCACGCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS CCA 90 bp TCCTCTTCTGGGTCTTCTGGTCCCAGCTCTGCATTGTCCAGGTCCTaGCGTTCGGGGTCTGTGACCCGCCGGCTCTCGTACACAGAGCTC +
Preference number: 5 (lower is better)
Translates to: SSSGSSGPSSALSRS*RSGSVTRRLSYTEL
Trigger: GAGCTCTGTGTACGAGAGCCGGCGGGTCACAGACCCCGAACGCCAGGACCTGGACAATGCAGAGCTGGGACCAGAAGACCCAGAAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS CCA 90 bp TCCCACTCTTCCAAGAGGGTGGCTGGGGCCTTCGGCTTTGACAACTaGAGGATCCGCGAGCTGGGGACTGCCATTTGGGCTGCCCTGGAT +
Preference number: 5 (lower is better)
Translates to: SHSSKRVAGAFGFDN*RIRELGTAIWAALD
Trigger: ATCCAGGGCAGCCCAAATGGCAGTCCCCAGCTCGCGGATCCTCCAGTTGTCAAAGCCGAAGGCCCCAGCCACCCTCTTGGAAGAGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS CCA 90 bp GCCTGGCCAAGTGAAGGAGGCGGTTATGGTCTGACACATGTGGCTTaGGTTTTGGCACGGGGTCCCACTCTTCCAAGAGGGTGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: AWPSEGGGYGLTHVA*VLARGPTLPRGWLG
Trigger: CCCCAGCCACCCTCTTGGAAGAGTGGGACCCCGTGCCAAAACCCAAGCCACATGTGTCAGACCATAACCGCCTCCTTCACTTGGCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp ACTGGGAGCGGAGGTCTTAGAGGCCAGGCCTGGGTTGATCACACTTTTCTGGTGCCCTCGTTGAGGCCCTaGCGCACTTTGGGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: TGSGGLRGQAWVDHTFLVPSLRP*RTLGLA
Trigger: GGCCAAGCCCAAAGTGCGCAAGGGCCTCAACGAGGG...CACCAGAAAAGTGTGATCAACCCAGGCCTGGCCTCTAAGACCTCCGCTCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS CCA 90 bp TTCGGCTTTGACAACTGGAGGATCCGCGAGCTGGGGACTGCCATTTaGGCTGCCCTGGATACCTGGGACACCTCAGACATGGGCATGCTC +
Preference number: 5 (lower is better)
Translates to: FGFDNWRIRELGTAI*AALDTWDTSDMGML
Trigger: GAGCATGCCCATGTCTGAGGTGTCCCAGGTATCCAGGGCAGCCCAAATGGCAGTCCCCAGCTCGCGGATCCTCCAGTTGTCAAAGCCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CAA 90 bp ACTGGGAGCGGAGGTCTTAGAGGCCAGGCCTGGGTTGATCACACTTTTCTGGTGCTGGCCACCACCTTCTaGGTGACATCCAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: TGSGGLRGQAWVDHTFLVLATTF*VTSSTS
Trigger: GGAGGTGCTGGATGTCACCAAGAAGGTGGTGGCCAG...CACCAGAAAAGTGTGATCAACCCAGGCCTGGCCTCTAAGACCTCCGCTCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR CAA 90 bp ACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAGGTCTTAGAGGCCAGCTGTCGTATCCCTCGTaGAGGCCCTTGCGCACTTTG +
Preference number: 5 (lower is better)
Translates to: TGLGCLRVFTGSGGLRGQLSYPS*RPLRTL
Trigger: CAAAGTGCGCAAGGGCCTCAACGAGGGATACGACAG...CTGGCCTCTAAGACCTCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS TCA 90 bp CGACTGAGCTTTGGGCCTGGCCAAGTGAAGGAGGCGGTTATGGTCTaGCACATGTGGCTTGGGTTTTGGCACGGGGTCCCACTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: RLSFGPGQVKEAVMV*HMWLGFWHGVPLFQ
Trigger: TTGGAAGAGTGGGACCCCGTGCCAAAACCCAAGCCACATGTGTCAGACCATAACCGCCTCCTTCACTTGGCCAGGCCCAAAGCTCAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS GCA 90 bp TTGGGAGAATTCCACGTTGAAGTTGGAGCTGCTTTCCCGCCCCGATaGGTTTGGGAGCCCAGAGAAGCGTGGGTCTTGCTCAAGCGCCTT +
Preference number: 5 (lower is better)
Translates to: LGEFHVEVGAAFPPR*VWEPREAWVLLKRL
Trigger: AAGGCGCTTGAGCAAGACCCACGCTTCTCTGGGCTCCCAAACGCATCGGGGCGGGAAAGCAGCTCCAACTTCAACGTGGAATTCTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS CCA 90 bp CAGGAGTCGTCCTGTTGTTGTTGTAATATTCCAGGTAGAATCTCTTaGGCCGAGACAGTTCCTCCACGCGGCGGGACACCGCGGGCACTG +
Preference number: 5 (lower is better)
Translates to: QESSCCCCNIPGRIS*AETVPPRGGTPRAL
Trigger: CAGTGCCCGCGGTGTCCCGCCGCGTGGAGGAACTGTCTCGGCCCAAGAGATTCTACCTGGAATATTACAACAACAACAGGACGACTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000528213.1
CDS-3UTR CAA 90 bp ACTGGGAGCGGAGGTCTTAGAGGCCAGGCCTGGGTTGATCACACTTTTCTGGTGCTCCTCTTCCTTGCTTaGGTCATGGTGGTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: TGSGGLRGQAWVDHTFLVLLFLA*VMVVLG
Trigger: CCCCAGCACCACCATGACCAAAGCAAGGAAGAGGAG...CACCAGAAAAGTGTGATCAACCCAGGCCTGGCCTCTAAGACCTCCGCTCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR CAA 90 bp AATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAGGTCTGCTGGGGACTGCCATTaGGGCTGCCCTGGATACCTG +
Preference number: 5 (lower is better)
Translates to: NHIHRVRVPEGVYWERRSAGDCH*GCPGYL
Trigger: CAGGTATCCAGGGCAGCCCAAATGGCAGTCCCCAGC...AGACCTCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR CAA 90 bp GCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCCCGCCCCGATGCGTTaGGGAGCCCAGAGAAGCGTG +
Preference number: 5 (lower is better)
Translates to: AQNNHIHRVRVPEGVYWEPAPMR*GAQRSV
Trigger: CACGCTTCTCTGGGCTCCCAAACGCATCGGGGCGGG...CTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS CCA 90 bp GTACACAGAGGGCCAGCAGAGACAGAAGTGCAAGCTCATCTTACATaGGGAGATCCAGGCATACCCCTTACCACAGCGTCCCTTCCTGCG +
Preference number: 5 (lower is better)
Translates to: VHRGPAETEVQAHLT*GDPGIPLTTASLPA
Trigger: CGCAGGAAGGGACGCTGTGGTAAGGGGTATGCCTGGATCTCCCCATGTAAGATGAGCTTGCACTTCTGTCTCTGCTGGCCCTCTGTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528213.1
CDS CCA 90 bp GAATTCCACGTTGAAGTTGGAGCTGCTTTCCCGCCCCGATGCGTTTaGGAGCCCAGAGAAGCGTGGGTCTTGCTCAAGCGCCTTTTGTCT +
Preference number: 5 (lower is better)
Translates to: EFHVEVGAAFPPRCV*EPREAWVLLKRLLS
Trigger: AGACAAAAGGCGCTTGAGCAAGACCCACGCTTCTCTGGGCTCCCAAACGCATCGGGGCGGGAAAGCAGCTCCAACTTCAACGTGGAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR CAA 90 bp ATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAGGTAGGCCCTTGCGCACTTaGGGCTTGGCCAGGGAGATG +
Preference number: 5 (lower is better)
Translates to: IITYTGLGCLRVFTGSGGRPLRT*GLAREM
Trigger: CATCTCCCTGGCCAAGCCCAAAGTGCGCAAGGGCCT...ACCTCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp CCAGGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTCCCTCGTTGAGGCCCTaGCGCACTTTGGGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: PGQKAQNNHIHRVRVPEGPSLRP*RTLGLA
Trigger: GGCCAAGCCCAAAGTGCGCAAGGGCCTCAACGAGGG...ACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS CCA 90 bp GTACACAGAGGGCCAGCAGAGACAGAAGTGCAAGCTCATCTTACATaGGGAGATCCAGGCATACCCCTTACCACAGCGTCCCTTCCTGTC +
Preference number: 5 (lower is better)
Translates to: VHRGPAETEVQAHLT*GDPGIPLTTASLPV
Trigger: GACAGGAAGGGACGCTGTGGTAAGGGGTATGCCTGGATCTCCCCATGTAAGATGAGCTTGCACTTCTGTCTCTGCTGGCCCTCTGTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342640.9
CDS-3UTR CAA 90 bp AGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAGCTGGGGACTGCCATTaGGGCTGCCCTGGATACCTG +
Preference number: 5 (lower is better)
Translates to: RIITYTGLGCLRVFTGSGAGDCH*GCPGYL
Trigger: CAGGTATCCAGGGCAGCCCAAATGGCAGTCCCCAGC...TCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp CCAGGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTCTGGGGCCTTCGGCTTaGACAACTGGAGGATCCGCG +
Preference number: 5 (lower is better)
Translates to: PGQKAQNNHIHRVRVPEGLGPSA*TTGGSA
Trigger: CGCGGATCCTCCAGTTGTCAAAGCCGAAGGCCCCAG...ACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp AGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGACTGGGGCCTTCGGCTTaGACAACTGGAGGATCCGCG +
Preference number: 5 (lower is better)
Translates to: RIITYTGLGCLRVFTGSGLGPSA*TTGGSA
Trigger: CGCGGATCCTCCAGTTGTCAAAGCCGAAGGCCCCAG...TCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp CTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCAGGCCCTTGCGCACTTaGGGCTTGGCCAGGGAGATG +
Preference number: 5 (lower is better)
Translates to: LRIITYTGLGCLRVFTGSRPLRT*GLAREM
Trigger: CATCTCCCTGGCCAAGCCCAAAGTGCGCAAGGGCCT...GCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp ACTGGGAGCGGAGGTCTTAGAGGCCAGGCCTGGGTTGATCACACTTTTCTGGTGAGAGAAGCGTGGGTCTaGCTCAAGCGCCTTTTGTCT +
Preference number: 5 (lower is better)
Translates to: TGSGGLRGQAWVDHTFLVREAWV*LKRLLS
Trigger: AGACAAAAGGCGCTTGAGCAAGACCCACGCTTCTCT...CACCAGAAAAGTGTGATCAACCCAGGCCTGGCCTCTAAGACCTCCGCTCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR CAA 90 bp GCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCTGGCCACCACCTTCTaGGTGACATCCAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: AQNNHIHRVRVPEGVYWELATTF*VTSSTS
Trigger: GGAGGTGCTGGATGTCACCAAGAAGGTGGTGGCCAG...CTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp CTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCCTGGCCACCACCTTCTaGGTGACATCCAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: LRIITYTGLGCLRVFTGSLATTF*VTSSTS
Trigger: GGAGGTGCTGGATGTCACCAAGAAGGTGGTGGCCAG...GCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp CTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCTCAGAAAGTGCCTCTTaGGGATCCAGGGTCTCCGGG +
Preference number: 5 (lower is better)
Translates to: LRIITYTGLGCLRVFTGSSESAS*GSRVSG
Trigger: CCCGGAGACCCTGGATCCCAAAGAGGCACTTTCTGA...GCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CAA 90 bp CCCGTGGGCCCTCAGGAATGGACGAATAAGTCTGGACTGAAGAGATTCAGAAGGACTTGCCAGTTTATCTaGGGCTCTGCCAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: PVGPQEWTNKSGLKRFRRTCQFI*GSASSM
Trigger: CATGGAGCTGGCAGAGCCCAAGATAAACTGGCAAGT...CCTTCTGAATCTCTTCAGTCCAGACTTATTCGTCCATTCCTGAGGGCCCACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR CAA 90 bp CCAGGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTCATGTGGCTTGGGTTTaGGCACGGGGTCCCACTCTT +
Preference number: 5 (lower is better)
Translates to: PGQKAQNNHIHRVRVPEGHVAWV*ARGPTL
Trigger: AAGAGTGGGACCCCGTGCCAAAACCCAAGCCACATG...ACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp AGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGACATGTGGCTTGGGTTTaGGCACGGGGTCCCACTCTT +
Preference number: 5 (lower is better)
Translates to: RIITYTGLGCLRVFTGSGHVAWV*ARGPTL
Trigger: AAGAGTGGGACCCCGTGCCAAAACCCAAGCCACATG...TCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp GGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTTGCGCACTTTGGGCTaGGCCAGGGAGATGATCCGG +
Preference number: 5 (lower is better)
Translates to: GQKAQNNHIHRVRVPEGVLRTLG*AREMIR
Trigger: CCGGATCATCTCCCTGGCCAAGCCCAAAGTGCGCAA...AACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp AAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGAGGCCCTTGCGCACTTaGGGCTTGGCCAGGGAGATG +
Preference number: 5 (lower is better)
Translates to: KAQNNHIHRVRVPEGVYWRPLRT*GLAREM
Trigger: CATCTCCCTGGCCAAGCCCAAAGTGCGCAAGGGCCT...CCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp GGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTGCCTCCTCCTCTTCCTaGCTTTGGTCATGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: GQKAQNNHIHRVRVPEGVASSSS*LWSWWC
Trigger: GCACCACCATGACCAAAGCAAGGAAGAGGAGGAGGC...AACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp CCCGTGGGCCCTCAGGAATGGACGAATAAGTCTGGACTGAAGAGATTCAGAAGGCCTGTCTTTCAGGACTaGCCAGTTTATCTTGGGCTC +
Preference number: 5 (lower is better)
Translates to: PVGPQEWTNKSGLKRFRRPVFQD*PVYLGL
Trigger: GAGCCCAAGATAAACTGGCAAGTCCTGAAAGACAGG...CCTTCTGAATCTCTTCAGTCCAGACTTATTCGTCCATTCCTGAGGGCCCACGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR CAA 90 bp CAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACGCTGGGGACTGCCATTaGGGCTGCCCTGGATACCTG +
Preference number: 5 (lower is better)
Translates to: QKAQNNHIHRVRVPEGVYAGDCH*GCPGYL
Trigger: CAGGTATCCAGGGCAGCCCAAATGGCAGTCCCCAGC...GTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp GGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTCTGACACATGTGGCTaGGGTTTTGGCACGGGGTCC +
Preference number: 5 (lower is better)
Translates to: GQKAQNNHIHRVRVPEGVSDTCG*GFGTGS
Trigger: GGACCCCGTGCCAAAACCCAAGCCACATGTGTCAGA...AACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp GAAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAAAAATCCCTCGTTGAGGCCCTaGCGCACTTTGGGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: ESDSENKQLDKSQVGCKNPSLRP*RTLGLA
Trigger: GGCCAAGCCCAAAGTGCGCAAGGGCCTCAACGAGGG...ATTTTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR CAA 90 bp AAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGCTCCTCTTCCTTGCTTaGGTCATGGTGGTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: KAQNNHIHRVRVPEGVYWLLFLA*VMVVLG
Trigger: CCCCAGCACCACCATGACCAAAGCAAGGAAGAGGAG...CCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp AGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAACTTGCCAGTTTATCTaGGGCTCTGCCAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: RIITYTGLGCLRVFTGSGTCQFI*GSASSM
Trigger: CATGGAGCTGGCAGAGCCCAAGATAAACTGGCAAGT...TCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp GAAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAAAAATCTGGGGCCTTCGGCTTaGACAACTGGAGGATCCGCG +
Preference number: 5 (lower is better)
Translates to: ESDSENKQLDKSQVGCKNLGPSA*TTGGSA
Trigger: CGCGGATCCTCCAGTTGTCAAAGCCGAAGGCCCCAG...ATTTTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR CAA 90 bp AAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGTCTGACACATGTGGCTaGGGTTTTGGCACGGGGTCC +
Preference number: 5 (lower is better)
Translates to: KAQNNHIHRVRVPEGVYWSDTCG*GFGTGS
Trigger: GGACCCCGTGCCAAAACCCAAGCCACATGTGTCAGA...CCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp TCAATGAAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCATTGCGCACTTTGGGCTaGGCCAGGGAGATGATCCGG +
Preference number: 5 (lower is better)
Translates to: SMKVTRKINSWTSRRLDALRTLG*AREMIR
Trigger: CCGGATCATCTCCCTGGCCAAGCCCAAAGTGCGCAA...TGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTTCATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR CAA 90 bp AAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGCTGTCGTATCCCTCGTaGAGGCCCTTGCGCACTTTG +
Preference number: 5 (lower is better)
Translates to: KAQNNHIHRVRVPEGVYWLSYPS*RPLRTL
Trigger: CAAAGTGCGCAAGGGCCTCAACGAGGGATACGACAG...CCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp AAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGTTGCTCAAGCGCCTTTaGTCTGCACTCACCCTGCCC +
Preference number: 5 (lower is better)
Translates to: KAQNNHIHRVRVPEGVYWLLKRL*SALTLP
Trigger: GGGCAGGGTGAGTGCAGACAAAAGGCGCTTGAGCAA...CCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR CAA 90 bp AGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGACCTGTCTTTCAGGACTaGCCAGTTTATCTTGGGCTC +
Preference number: 5 (lower is better)
Translates to: RIITYTGLGCLRVFTGSGPVFQD*PVYLGL
Trigger: GAGCCCAAGATAAACTGGCAAGTCCTGAAAGACAGG...TCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp CCAGGCCAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTCCTGTCTTTCAGGACTaGCCAGTTTATCTTGGGCTC +
Preference number: 5 (lower is better)
Translates to: PGQKAQNNHIHRVRVPEGPVFQD*PVYLGL
Trigger: GAGCCCAAGATAAACTGGCAAGTCCTGAAAGACAGG...ACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTGGCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp CAAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTCTGACACATGTGGCTaGGGTTTTGGCACGGGGTCC +
Preference number: 5 (lower is better)
Translates to: QKAQNNHIHRVRVPEGVYSDTCG*GFGTGS
Trigger: GGACCCCGTGCCAAAACCCAAGCCACATGTGTCAGA...GTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp GAAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAAAAATTTGCGCACTTTGGGCTaGGCCAGGGAGATGATCCGG +
Preference number: 5 (lower is better)
Translates to: ESDSENKQLDKSQVGCKNLRTLG*AREMIR
Trigger: CCGGATCATCTCCCTGGCCAAGCCCAAAGTGCGCAA...ATTTTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR CAA 90 bp AAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTTCAGAAAGTGCCTCTTaGGGATCCAGGGTCTCCGGG +
Preference number: 5 (lower is better)
Translates to: KKLRIITYTGLGCLRVFTSESAS*GSRVSG
Trigger: CCCGGAGACCCTGGATCCCAAAGAGGCACTTTCTGA...AGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS-3UTR CAA 90 bp AATGAAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAAACTCCTCTTCCTTGCTTaGGTCATGGTGGTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: NESDSENKQLDKSQVGCKLLFLA*VMVVLG
Trigger: CCCCAGCACCACCATGACCAAAGCAAGGAAGAGGAG...TTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR CAA 90 bp AAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGCCTCCTCCTCTTCCTaGCTTTGGTCATGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: KKLRIITYTGLGCLRVFTASSSS*LWSWWC
Trigger: GCACCACCATGACCAAAGCAAGGAAGAGGAGGAGGC...AGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp AATGAAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAAAGCCTCCTCCTCTTCCTaGCTTTGGTCATGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: NESDSENKQLDKSQVGCKASSSS*LWSWWC
Trigger: GCACCACCATGACCAAAGCAAGGAAGAGGAGGAGGC...TTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR CAA 90 bp AAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTCATGTGGCTTGGGTTTaGGCACGGGGTCCCACTCTT +
Preference number: 5 (lower is better)
Translates to: KKLRIITYTGLGCLRVFTHVAWV*ARGPTL
Trigger: AAGAGTGGGACCCCGTGCCAAAACCCAAGCCACATG...AGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS-3UTR CAA 90 bp GAAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAAAAATCTGTCGTATCCCTCGTaGAGGCCCTTGCGCACTTTG +
Preference number: 5 (lower is better)
Translates to: ESDSENKQLDKSQVGCKNLSYPS*RPLRTL
Trigger: CAAAGTGCGCAAGGGCCTCAACGAGGGATACGACAG...ATTTTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR CAA 90 bp AATGAAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAAAAATTCCACGTTGAAGTaGGAGCTGCTTTCCCGCCCC +
Preference number: 5 (lower is better)
Translates to: NESDSENKQLDKSQVGCKNSTLK*ELLSRP
Trigger: GGGGCGGGAAAGCAGCTCCAACTTCAACGTGGAATT...TTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR CAA 90 bp AAAAAGCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGATGGACAGCCGGCTTaGGGAGAATTCCACGTTGAA +
Preference number: 5 (lower is better)
Translates to: KKLRIITYTGLGCLRVFTDGQPA*GEFHVE
Trigger: TTCAACGTGGAATTCTCCCAAAGCCGGCTGTCCATC...AGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR CAA 90 bp AAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAAAAATAACTTGCCAGTTTATCTaGGGCTCTGCCAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: KVTRKINSWTSRRLDAKITCQFI*GSASSM
Trigger: CATGGAGCTGGCAGAGCCCAAGATAAACTGGCAAGT...TATTTTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR CAA 90 bp ATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGCGGAGGTTGGACAAGTCGCAGGTaGGATGCAAAAATAAATATT +
Preference number: 5 (lower is better)
Translates to: IITYTGLGCLRVFTGSGGWTSRR*DAKINI
Trigger: AATATTTATTTTTGCATCCAACCTGCGACTTGTCCA...ACCTCCGCTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS-3UTR CAA 90 bp AATGAAAGTGACTCGGAAAATAAACAGCTGGACAAGTCGCAGGTTGGATGCAAATGGGAGAATTCCACGTaGAAGTTGGAGCTGCTTTCC +
Preference number: 5 (lower is better)
Translates to: NESDSENKQLDKSQVGCKWENST*KLELLS
Trigger: GGAAAGCAGCTCCAACTTCAACGTGGAATTCTCCCA...TTTGCATCCAACCTGCGACTTGTCCAGCTGTTTATTTTCCGAGTCACTTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS-3UTR CAA 90 bp GCTCAGAATAATCACATACACAGGGTTAGGGTGCCTGAGGGTGTTTACTGGGAGTGGACAAGTCGCAGGTaGGATGCAAAAATAAATATT +
Preference number: 5 (lower is better)
Translates to: AQNNHIHRVRVPEGVYWEWTSRR*DAKINI
Trigger: AATATTTATTTTTGCATCCAACCTGCGACTTGTCCA...CTCCCAGTAAACACCCTCAGGCACCCTAACCCTGTGTATGTGATTATTCTGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000530711.3
CDS CCA 72 bp GGGTCTGTGACCCGCCGGCTCTCGTACACAGAGCTCTaGAGGCCACGGGGGTCGCCGTCCTGCTCCCTTTCC +
Preference number: 6 (lower is better)
Translates to: GSVTRRLSYTEL*RPRGSPSCSLS
Trigger: GGAAAGGGAGCAGGACGGCGACCCCCGTGGCCTCCAGAGCTCTGTGTACGAGAGCCGGCGGGTCACAGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS GCA 72 bp TACACAGAGCTCTGGAGGCCACGGGGGTCGCCGTCCTaGTCCCTTTCCGACCTGCCCGCAGCCTCAGAGCTG +
Preference number: 6 (lower is better)
Translates to: YTELWRPRGSPS*SLSDLPAASEL
Trigger: CAGCTCTGAGGCTGCGGGCAGGTCGGAAAGGGAGCAGGACGGCGACCCCCGTGGCCTCCAGAGCTCTGTGTA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS CAA 90 bp GCGAGGGGACGCCTGTCGTATCCCTCGTTGAGGCCCTTGCGCACTTaGGGCTTGGCCAGGGAGATGATCCGGGGGCTGGCCACCACCTTC +
Preference number: 6 (lower is better)
Translates to: ARGRLSYPSLRPLRT*GLAREMIRGLATTF
Trigger: GAAGGTGGTGGCCAGCCCCCGGATCATCTCCCTGGCCAAGCCCAAAGTGCGCAAGGGCCTCAACGAGGGATACGACAGGCGTCCCCTCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS CAA 90 bp CTCATAGAGGCGAGGGGACGCCTGTCGTATCCCTCGTTGAGGCCCTaGCGCACTTTGGGCTTGGCCAGGGAGATGATCCGGGGGCTGGCC +
Preference number: 6 (lower is better)
Translates to: LIEARGRLSYPSLRP*RTLGLAREMIRGLA
Trigger: GGCCAGCCCCCGGATCATCTCCCTGGCCAAGCCCAAAGTGCGCAAGGGCCTCAACGAGGGATACGACAGGCGTCCCCTCGCCTCTATGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS CAA 90 bp GAGACAGGGTCCGAGCCCCACTGCCTCTTGCCCTGGGTCTCCCGTTaGCTCCCAAACTCCTCACTCTCCTTTGGCCACCGCCCAGAGGGC +
Preference number: 6 (lower is better)
Translates to: ETGSEPHCLLPWVSR*LPNSSLSFGHRPEG
Trigger: GCCCTCTGGGCGGTGGCCAAAGGAGAGTGAGGAGTTTGGGAGCAAACGGGAGACCCAGGGCAAGAGGCAGTGGGGCTCGGACCCTGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528213.1
CDS TCA 72 bp GCTCTGCATTGTCCAGGTCCTGGCGTTCGGGGTCTGTaGCCCGCCGGCTCTCGTACACAGAGCTCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: ALHCPGPGVRGL*PAGSRTQSSGG
Trigger: GCCTCCAGAGCTCTGTGTACGAGAGCCGGCGGGTCACAGACCCCGAACGCCAGGACCTGGACAATGCAGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS GCA 72 bp CCGAGCCCCACTGCCTCTTGCCCTGGGTCTCCCGTTTaGTCCCAAACTCCTCACTCTCCTTTGGCCACCGCC +
Preference number: 6 (lower is better)
Translates to: PSPTASCPGSPV*SQTPHSPLATA
Trigger: GGCGGTGGCCAAAGGAGAGTGAGGAGTTTGGGAGCAAACGGGAGACCCAGGGCAAGAGGCAGTGGGGCTCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528213.1
CDS GCA 72 bp CCTGCGAGGAGACAGGGTCCGAGCCCCACTGCCTCTTaGCCTGGGTCTCCCGTTTGCTCCCAAACTCCTCAC +
Preference number: 6 (lower is better)
Translates to: PARRQGPSPTAS*PGSPVCSQTPH
Trigger: GTGAGGAGTTTGGGAGCAAACGGGAGACCCAGGGCAAGAGGCAGTGGGGCTCGGACCCTGTCTCCTCGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528213.1
CDS GCA 72 bp GTCCCTTCCTGCGAGGAGACAGGGTCCGAGCCCCACTaGCTCTTGCCCTGGGTCTCCCGTTTGCTCCCAAAC +
Preference number: 6 (lower is better)
Translates to: VPSCEETGSEPH*LLPWVSRLLPN
Trigger: GTTTGGGAGCAAACGGGAGACCCAGGGCAAGAGGCAGTGGGGCTCGGACCCTGTCTCCTCGCAGGAAGGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528213.1
CDS CCA 72 bp TCCCTTTCCGACCTGCCCGCAGCCTCAGAGCTGGGCTaGTTCCCGAGTGACCTTCGCCTGCTGTCCCCCATA +
Preference number: 6 (lower is better)
Translates to: SLSDLPAASELG*FPSDLRLLSPI
Trigger: TATGGGGGACAGCAGGCGAAGGTCACTCGGGAACCAGCCCAGCTCTGAGGCTGCGGGCAGGTCGGAAAGGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342640.9
CDS CAA 72 bp GCCAGGGAGATGATCCGGGGGCTGGCCACCACCTTCTaGGTGACATCCAGCACCTCCCAGCGAGGATCTCGG +
Preference number: 6 (lower is better)
Translates to: AREMIRGLATTF*VTSSTSQRGSR
Trigger: CCGAGATCCTCGCTGGGAGGTGCTGGATGTCACCAAGAAGGTGGTGGCCAGCCCCCGGATCATCTCCCTGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS CAA 72 bp GCGAGGGGACGCCTGTCGTATCCCTCGTTGAGGCCCTaGCGCACTTTGGGCTTGGCCAGGGAGATGATCCGG +
Preference number: 6 (lower is better)
Translates to: ARGRLSYPSLRP*RTLGLAREMIR
Trigger: CCGGATCATCTCCCTGGCCAAGCCCAAAGTGCGCAAGGGCCTCAACGAGGGATACGACAGGCGTCCCCTCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS CAA 90 bp GGACGCCTGTCGTATCCCTCGTTGAGGCCCTTGCGCACTTTGGGCTaGGCCAGGGAGATGATCCGGGGGCTGGCCACCACCTTCTTGGTG +
Preference number: 6 (lower is better)
Translates to: GRLSYPSLRPLRTLG*AREMIRGLATTFLV
Trigger: CACCAAGAAGGTGGTGGCCAGCCCCCGGATCATCTCCCTGGCCAAGCCCAAAGTGCGCAAGGGCCTCAACGAGGGATACGACAGGCGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS CAA 90 bp GCTTTCCCGCCCCGATGCGTTTGGGAGCCCAGAGAAGCGTGGGTCTaGCTCAAGCGCCTTTTGTCTGCACTCACCCTGCCCACCCGCCTC +
Preference number: 6 (lower is better)
Translates to: AFPPRCVWEPREAWV*LKRLLSALTLPTRL
Trigger: GAGGCGGGTGGGCAGGGTGAGTGCAGACAAAAGGCGCTTGAGCAAGACCCACGCTTCTCTGGGCTCCCAAACGCATCGGGGCGGGAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS CCA 72 bp GGATCCGCGAGCTGGGGACTGCCATTTGGGCTGCCCTaGATACCTGGGACACCTCAGACATGGGCATGCTCC +
Preference number: 6 (lower is better)
Translates to: GSASWGLPFGLP*IPGTPQTWACS
Trigger: GGAGCATGCCCATGTCTGAGGTGTCCCAGGTATCCAGGGCAGCCCAAATGGCAGTCCCCAGCTCGCGGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS CCA 72 bp GGGCCTTCGGCTTTGACAACTGGAGGATCCGCGAGCTaGGGACTGCCATTTGGGCTGCCCTGGATACCTGGG +
Preference number: 6 (lower is better)
Translates to: GPSALTTGGSAS*GLPFGLPWIPG
Trigger: CCCAGGTATCCAGGGCAGCCCAAATGGCAGTCCCCAGCTCGCGGATCCTCCAGTTGTCAAAGCCGAAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS CCA 72 bp GGTCTCCCGTTTGCTCCCAAACTCCTCACTCTCCTTTaGCCACCGCCCAGAGGGCCACCGTTCCCTAGCCAC +
Preference number: 6 (lower is better)
Translates to: GLPFAPKLLTLL*PPPRGPPFPSH
Trigger: GTGGCTAGGGAACGGTGGCCCTCTGGGCGGTGGCCAAAGGAGAGTGAGGAGTTTGGGAGCAAACGGGAGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528213.1
CDS CAA 72 bp CTCATAGAGGCGAGGGGACGCCTGTCGTATCCCTCGTaGAGGCCCTTGCGCACTTTGGGCTTGGCCAGGGAG +
Preference number: 6 (lower is better)
Translates to: LIEARGRLSYPS*RPLRTLGLARE
Trigger: CTCCCTGGCCAAGCCCAAAGTGCGCAAGGGCCTCAACGAGGGATACGACAGGCGTCCCCTCGCCTCTATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS CAA 72 bp TCCGAGCCCCACTGCCTCTTGCCCTGGGTCTCCCGTTaGCTCCCAAACTCCTCACTCTCCTTTGGCCACCGC +
Preference number: 6 (lower is better)
Translates to: SEPHCLLPWVSR*LPNSSLSFGHR
Trigger: GCGGTGGCCAAAGGAGAGTGAGGAGTTTGGGAGCAAACGGGAGACCCAGGGCAAGAGGCAGTGGGGCTCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528213.1
CDS CAA 72 bp TCCTGCGAGGAGACAGGGTCCGAGCCCCACTGCCTCTaGCCCTGGGTCTCCCGTTTGCTCCCAAACTCCTCA +
Preference number: 6 (lower is better)
Translates to: SCEETGSEPHCL*PWVSRLLPNSS
Trigger: TGAGGAGTTTGGGAGCAAACGGGAGACCCAGGGCAAGAGGCAGTGGGGCTCGGACCCTGTCTCCTCGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528213.1
CDS CAA 90 bp TTGGGCTTGGCCAGGGAGATGATCCGGGGGCTGGCCACCACCTTCTaGGTGACATCCAGCACCTCCCAGCGAGGATCTCGGTCAGGAACG +
Preference number: 6 (lower is better)
Translates to: LGLAREMIRGLATTF*VTSSTSQRGSRSGT
Trigger: CGTTCCTGACCGAGATCCTCGCTGGGAGGTGCTGGATGTCACCAAGAAGGTGGTGGCCAGCCCCCGGATCATCTCCCTGGCCAAGCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS CAA 90 bp GGTGGCAAGCTCATAGAGGCGAGGGGACGCCTGTCGTATCCCTCGTaGAGGCCCTTGCGCACTTTGGGCTTGGCCAGGGAGATGATCCGG +
Preference number: 6 (lower is better)
Translates to: GGKLIEARGRLSYPS*RPLRTLGLAREMIR
Trigger: CCGGATCATCTCCCTGGCCAAGCCCAAAGTGCGCAAGGGCCTCAACGAGGGATACGACAGGCGTCCCCTCGCCTCTATGAGCTTGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS CAA 90 bp AGCGTCCCTTCCTGCGAGGAGACAGGGTCCGAGCCCCACTGCCTCTaGCCCTGGGTCTCCCGTTTGCTCCCAAACTCCTCACTCTCCTTT +
Preference number: 6 (lower is better)
Translates to: SVPSCEETGSEPHCL*PWVSRLLPNSSLSF
Trigger: AAAGGAGAGTGAGGAGTTTGGGAGCAAACGGGAGACCCAGGGCAAGAGGCAGTGGGGCTCGGACCCTGTCTCCTCGCAGGAAGGGACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528213.1
CDS GCA 72 bp AGATCCAGGCATACCCCTTACCACAGCGTCCCTTCCTaGGAGGAGACAGGGTCCGAGCCCCACTGCCTCTTG +
Preference number: 6 (lower is better)
Translates to: RSRHTPYHSVPS*EETGSEPHCLL
Trigger: CAAGAGGCAGTGGGGCTCGGACCCTGTCTCCTCGCAGGAAGGGACGCTGTGGTAAGGGGTATGCCTGGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528213.1
CDS CCA 72 bp TCCAAGAGGGTGGCTGGGGCCTTCGGCTTTGACAACTaGAGGATCCGCGAGCTGGGGACTGCCATTTGGGCT +
Preference number: 6 (lower is better)
Translates to: SKRVAGAFGFDN*RIRELGTAIWA
Trigger: AGCCCAAATGGCAGTCCCCAGCTCGCGGATCCTCCAGTTGTCAAAGCCGAAGGCCCCAGCCACCCTCTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS CCA 72 bp TCTCCTTTCCCTCGAGGGGTCTCTGAGGGAGGACTTTaGCACCACGAAGGCCTGGACCAACCGCAGCTCCAC +
Preference number: 6 (lower is better)
Translates to: SPFPRGVSEGGL*HHEGLDQPQLH
Trigger: GTGGAGCTGCGGTTGGTCCAGGCCTTCGTGGTGCCAAAGTCCTCCCTCAGAGACCCCTCGAGGGAAAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS CAA 72 bp AGCTCCTCTTCTGGGTCTTCTGGTCCCAGCTCTGCATaGTCCAGGTCCTGGCGTTCGGGGTCTGTGACCCGC +
Preference number: 6 (lower is better)
Translates to: SSSSGSSGPSSA*SRSWRSGSVTR
Trigger: GCGGGTCACAGACCCCGAACGCCAGGACCTGGACAATGCAGAGCTGGGACCAGAAGACCCAGAAGAGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS GCA 72 bp CCCGATGCGTTTGGGAGCCCAGAGAAGCGTGGGTCTTaGTCAAGCGCCTTTTGTCTGCACTCACCCTGCCCA +
Preference number: 6 (lower is better)
Translates to: PDAFGSPEKRGS*SSAFCLHSPCP
Trigger: TGGGCAGGGTGAGTGCAGACAAAAGGCGCTTGAGCAAGACCCACGCTTCTCTGGGCTCCCAAACGCATCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS CCA 72 bp TTCCCGCCCCGATGCGTTTGGGAGCCCAGAGAAGCGTaGGTCTTGCTCAAGCGCCTTTTGTCTGCACTCACC +
Preference number: 6 (lower is better)
Translates to: FPPRCVWEPREA*VLLKRLLSALT
Trigger: GGTGAGTGCAGACAAAAGGCGCTTGAGCAAGACCCACGCTTCTCTGGGCTCCCAAACGCATCGGGGCGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS CCA 72 bp GGATCCGCGAGCTGGGGACTGCCATTTGGGCTGCCCTaGATACCTGGGACACCTGTCTTTCAGGACTTGCCA +
Preference number: 6 (lower is better)
Translates to: GSASWGLPFGLP*IPGTPVFQDLP
Trigger: TGGCAAGTCCTGAAAGACAGGTGTCCCAGGTATCCAGGGCAGCCCAAATGGCAGTCCCCAGCTCGCGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS CAA 72 bp GAGCCCAGAGAAGCGTGGGTCTTGCTCAAGCGCCTTTaGTCTGCACTCACCCTGCCCACCCGCCTCTCCTTT +
Preference number: 6 (lower is better)
Translates to: EPREAWVLLKRL*SALTLPTRLSF
Trigger: AAAGGAGAGGCGGGTGGGCAGGGTGAGTGCAGACAAAAGGCGCTTGAGCAAGACCCACGCTTCTCTGGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS CAA 90 bp CCAAGTGAAGGAGGCGGTTATGGTCTGACACATGTGGCTTGGGTTTaGGCACGGGGTCCCACTCTTCCAAGAGGGTGGCTGGGGCCTTCG +
Preference number: 6 (lower is better)
Translates to: PSEGGGYGLTHVAWV*ARGPTLPRGWLGPS
Trigger: CGAAGGCCCCAGCCACCCTCTTGGAAGAGTGGGACCCCGTGCCAAAACCCAAGCCACATGTGTCAGACCATAACCGCCTCCTTCACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS CAA 90 bp GGGAGCTTCTGGCTGATGGACAGCCGGCTTTGGGAGAATTCCACGTaGAAGTTGGAGCTGCTTTCCCGCCCCGATGCGTTTGGGAGCCCA +
Preference number: 6 (lower is better)
Translates to: GSFWLMDSRLWENST*KLELLSRPDAFGSP
Trigger: TGGGCTCCCAAACGCATCGGGGCGGGAAAGCAGCTCCAACTTCAACGTGGAATTCTCCCAAAGCCGGCTGTCCATCAGCCAGAAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS GCA 72 bp TTCCACGTTGAAGTTGGAGCTGCTTTCCCGCCCCGATaGGTTTGGGAGCCCAGAGAAGCGTGGGTCTTGCTC +
Preference number: 6 (lower is better)
Translates to: FHVEVGAAFPPR*VWEPREAWVLL
Trigger: GAGCAAGACCCACGCTTCTCTGGGCTCCCAAACGCATCGGGGCGGGAAAGCAGCTCCAACTTCAACGTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS CAA 72 bp GGAGGCGGTTATGGTCTGACACATGTGGCTTGGGTTTaGGCACGGGGTCCCACTCTTCCAAGAGGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: GGGYGLTHVAWV*ARGPTLPRGWL
Trigger: CAGCCACCCTCTTGGAAGAGTGGGACCCCGTGCCAAAACCCAAGCCACATGTGTCAGACCATAACCGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS CAA 90 bp TTCTGGCTGATGGACAGCCGGCTTTGGGAGAATTCCACGTTGAAGTaGGAGCTGCTTTCCCGCCCCGATGCGTTTGGGAGCCCAGAGAAG +
Preference number: 6 (lower is better)
Translates to: FWLMDSRLWENSTLK*ELLSRPDAFGSPEK
Trigger: CTTCTCTGGGCTCCCAAACGCATCGGGGCGGGAAAGCAGCTCCAACTTCAACGTGGAATTCTCCCAAAGCCGGCTGTCCATCAGCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS TCA 72 bp TTTGGGCCTGGCCAAGTGAAGGAGGCGGTTATGGTCTaGCACATGTGGCTTGGGTTTTGGCACGGGGTCCCA +
Preference number: 6 (lower is better)
Translates to: FGPGQVKEAVMV*HMWLGFWHGVP
Trigger: TGGGACCCCGTGCCAAAACCCAAGCCACATGTGTCAGACCATAACCGCCTCCTTCACTTGGCCAGGCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS GCA 72 bp CTGCCCTGGATACCTGGGACACCTCAGACATGGGCATaGTCCAGAAGTTATCACGAATCTTCGGGGCGGCCA +
Preference number: 6 (lower is better)
Translates to: LPWIPGTPQTWA*SRSYHESSGRP
Trigger: TGGCCGCCCCGAAGATTCGTGATAACTTCTGGAGCATGCCCATGTCTGAGGTGTCCCAGGTATCCAGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000528213.1
CDS CAA 72 bp ATGGACAGCCGGCTTTGGGAGAATTCCACGTTGAAGTaGGAGCTGCTTTCCCGCCCCGATGCGTTTGGGAGC +
Preference number: 6 (lower is better)
Translates to: MDSRLWENSTLK*ELLSRPDAFGS
Trigger: GCTCCCAAACGCATCGGGGCGGGAAAGCAGCTCCAACTTCAACGTGGAATTCTCCCAAAGCCGGCTGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS CCA 72 bp GGGCCAGCAGAGACAGAAGTGCAAGCTCATCTTACATaGGGAGATCCAGGCATACCCCTTACCACAGCGTCC +
Preference number: 6 (lower is better)
Translates to: GPAETEVQAHLT*GDPGIPLTTAS
Trigger: GGACGCTGTGGTAAGGGGTATGCCTGGATCTCCCCATGTAAGATGAGCTTGCACTTCTGTCTCTGCTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000528213.1
CDS CCA 72 bp AGTGAAGGAGGCGGTTATGGTCTGACACATGTGGCTTaGGTTTTGGCACGGGGTCCCACTCTTCCAAGAGGG +
Preference number: 6 (lower is better)
Translates to: SEGGGYGLTHVA*VLARGPTLPRG
Trigger: CCCTCTTGGAAGAGTGGGACCCCGTGCCAAAACCCAAGCCACATGTGTCAGACCATAACCGCCTCCTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000530711.3
CDS CCA 72 bp GTGCTGGGGAGCTTCTGGCTGATGGACAGCCGGCTTTaGGAGAATTCCACGTTGAAGTTGGAGCTGCTTTCC +
Preference number: 6 (lower is better)
Translates to: VLGSFWLMDSRL*ENSTLKLELLS
Trigger: GGAAAGCAGCTCCAACTTCAACGTGGAATTCTCCCAAAGCCGGCTGTCCATCAGCCAGAAGCTCCCCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS CCA 72 bp TTCCTTGCTTTGGTCATGGTGGTGCTGGGGAGCTTCTaGCTGATGGACAGCCGGCTTTGGGAGAATTCCACG +
Preference number: 6 (lower is better)
Translates to: FLALVMVVLGSF*LMDSRLWENST
Trigger: CGTGGAATTCTCCCAAAGCCGGCTGTCCATCAGCCAGAAGCTCCCCAGCACCACCATGACCAAAGCAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS CAA 72 bp TGGCTGATGGACAGCCGGCTTTGGGAGAATTCCACGTaGAAGTTGGAGCTGCTTTCCCGCCCCGATGCGTTT +
Preference number: 6 (lower is better)
Translates to: WLMDSRLWENST*KLELLSRPDAF
Trigger: AAACGCATCGGGGCGGGAAAGCAGCTCCAACTTCAACGTGGAATTCTCCCAAAGCCGGCTGTCCATCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS CAA 72 bp GGTGCTGGGGAGCTTCTGGCTGATGGACAGCCGGCTTaGGGAGAATTCCACGTTGAAGTTGGAGCTGCTTTC +
Preference number: 6 (lower is better)
Translates to: GAGELLADGQPA*GEFHVEVGAAF
Trigger: GAAAGCAGCTCCAACTTCAACGTGGAATTCTCCCAAAGCCGGCTGTCCATCAGCCAGAAGCTCCCCAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530711.3
CDS GCA 72 bp CAAGTCCTTGTCCAGGACTCTCTCCAACTCAGAAAGTaGCTCTTTGGGATCCAGGGTCTCCGGGAACTCCTC +
Preference number: 6 (lower is better)
Translates to: QVLVQDSLQLRK*LFGIQGLRELL
Trigger: GAGGAGTTCCCGGAGACCCTGGATCCCAAAGAGGCACTTTCTGAGTTGGAGAGAGTCCTGGACAAGGACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS GCA 72 bp CCCTTACCACAGCGTCCCTTCCTGTCTTTCAGGACTTaGCAGTTTATCTTGGGCTCTGCCAGCTCCATGAGC +
Preference number: 6 (lower is better)
Translates to: PLPQRPFLSFRT*QFILGSASSMS
Trigger: GCTCATGGAGCTGGCAGAGCCCAAGATAAACTGGCAAGTCCTGAAAGACAGGAAGGGACGCTGTGGTAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342640.9
CDS GCA 72 bp TCGGTCCAGTACACAGAGGGCCTGTCTTTCAGGACTTaGCAGTTTATCTTGGGCTCTGCCAGCTCCATGAGC +
Preference number: 6 (lower is better)
Translates to: SVQYTEGLSFRT*QFILGSASSMS
Trigger: GCTCATGGAGCTGGCAGAGCCCAAGATAAACTGGCAAGTCCTGAAAGACAGGCCCTCTGTGTACTGGACCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346878.3
CDS CCA 72 bp TTCCTTGCTTTGGTCATGGTGGTGCTGGGGAGCTTCTaGCTGATGGACAGCCGGCTGATTTCAGGAATGTCC +
Preference number: 6 (lower is better)
Translates to: FLALVMVVLGSF*LMDSRLISGMS
Trigger: GGACATTCCTGAAATCAGCCGGCTGTCCATCAGCCAGAAGCTCCCCAGCACCACCATGACCAAAGCAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342640.9
ENST00000346878.3
CDS CCA 72 bp TCCTGTTGTTGTTGTAATATTCCAGGTAGAATCTCTTaGGCCGAGACAGTTCCTCCACGCGGCGGGACACCG +
Preference number: 6 (lower is better)
Translates to: SCCCCNIPGRIS*AETVPPRGGTP
Trigger: CGGTGTCCCGCCGCGTGGAGGAACTGTCTCGGCCCAAGAGATTCTACCTGGAATATTACAACAACAACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342640.9
ENST00000346878.3
ENST00000528213.1