Pregenerated sensors for TH2LCRR (Homo sapiens)
Ensembl gene IDs: ENSG00000223442Ensembl transcript IDs: ENST00000417516.1, ENST00000435042.1, ENST00000457489.1, ENST00000458509.1
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CATCTGTGCCGCGCCTCTCCGCACCGCCCGCCACGCCTTGGTCCCTaGAGACCACCCTCCAGGGCAGGGGCTGCCGCTCGGCCGGGCCCG | + |
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Preference number: 5 (lower is better) Translates to: HLCRASPHRPPRLGP*RPPSRAGAAARPGP Trigger: CGGGCCCGGCCGAGCGGCAGCCCCTGCCCTGGAGGGTGGTCTCCAGGGACCAAGGCGTGGCGGGCGGTGCGGAGAGGCGCGGCACAGATG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458509.1 |
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| CDS GCA 90 bp | ACAACTCTCTCAGGCCTTACTCCTCCTGACTGGGCATCATGTCTTTaGCAACGGAGACCCAGAGTCCAGAGAAACCCGAAAAAGCAACCC | + |
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Preference number: 5 (lower is better) Translates to: TTLSGLTPPDWASCL*QRRPRVQRNPKKQP Trigger: GGGTTGCTTTTTCGGGTTTCTCTGGACTCTGGGTCTCCGTTGGCAAAGACATGATGCCCAGTCAGGAGGAGTAAGGCCTGAGAGAGTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000417516.1 |
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| CDS CCA 90 bp | CAAGGGAGAGAATCCAGTCATGGGTTCTTAGCTTCTCTTTCTGGTTaGACCAGTAAAGCCTCTTCCTCATCCCTCTTTTCTGCTCATCAC | + |
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Preference number: 5 (lower is better) Translates to: QGRESSHGFLASLSG*TSKASSSSLFSAHH Trigger: GTGATGAGCAGAAAAGAGGGATGAGGAAGAGGCTTTACTGGTCCAACCAGAAAGAGAAGCTAAGAACCCATGACTGGATTCTCTCCCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457489.1 |
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| CDS CCA 72 bp | TCTGTGCCGCGCCTCTCCGCACCGCCCGCCACGCCTTaGTCCCTGGAGACCACCCTCCAGGGCAGGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SVPRLSAPPATP*SLETTLQGRGC Trigger: GCAGCCCCTGCCCTGGAGGGTGGTCTCCAGGGACCAAGGCGTGGCGGGCGGTGCGGAGAGGCGCGGCACAGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458509.1 |
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| CDS CAA 72 bp | ATCTGTGCCGCGCCTCTCCGCACCGCCCGCCACGCCTaGGTCCCTGGAGACCACCCTCCAGGGCAGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ICAAPLRTARHA*VPGDHPPGQGL Trigger: CAGCCCCTGCCCTGGAGGGTGGTCTCCAGGGACCAAGGCGTGGCGGGCGGTGCGGAGAGGCGCGGCACAGAT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458509.1 |
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| CDS CAA 90 bp | GATGTAGCCATCTGTGCCGCGCCTCTCCGCACCGCCCGCCACGCCTaGGTCCCTGGAGACCACCCTCCAGGGCAGGGGCTGCCGCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: DVAICAAPLRTARHA*VPGDHPPGQGLPLG Trigger: GCCGAGCGGCAGCCCCTGCCCTGGAGGGTGGTCTCCAGGGACCAAGGCGTGGCGGGCGGTGCGGAGAGGCGCGGCACAGATGGCTACATC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458509.1 |
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| CDS GCA 72 bp | GGGAGACACAGCCTTGGATATGCGAGGACGATGCAGTaGTGGACAAAAGGCAGGTATCTCAAAAGCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: GRHSLGYARTMQ*WTKGRYLKSLG Trigger: CCCCAGGCTTTTGAGATACCTGCCTTTTGTCCAGCACTGCATCGTCCTCGCATATCCAAGGCTGTGTCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000417516.1 ENST00000435042.1 ENST00000457489.1 ENST00000458509.1 |
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| CDS GCA 72 bp | TCAGGCCTTACTCCTCCTGACTGGGCATCATGTCTTTaGCAACGGAGACCCAGAGTCCAGAGAAACCCGAAA | + |
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Preference number: 6 (lower is better) Translates to: SGLTPPDWASCL*QRRPRVQRNPK Trigger: TTTCGGGTTTCTCTGGACTCTGGGTCTCCGTTGGCAAAGACATGATGCCCAGTCAGGAGGAGTAAGGCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417516.1 |
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| CDS CAA 90 bp | CAGTCTGCTAAAAGCCGAGTGGTGATGCTGAAGGGAGACACAGCCTaGGATATGCGAGGACGATGCAGTGCTGGACAAAAGGCAGGTATC | + |
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Preference number: 6 (lower is better) Translates to: QSAKSRVVMLKGDTA*DMRGRCSAGQKAGI Trigger: GATACCTGCCTTTTGTCCAGCACTGCATCGTCCTCGCATATCCAAGGCTGTGTCTCCCTTCAGCATCACCACTCGGCTTTTAGCAGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457489.1 |
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| CDS CAA 72 bp | AACTACCGAGTGGTGATGCTGAAGGGAGACACAGCCTaGGATATGCGAGGACGATGCAGTGCTGGACAAAAG | + |
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Preference number: 6 (lower is better) Translates to: NYRVVMLKGDTA*DMRGRCSAGQK Trigger: CTTTTGTCCAGCACTGCATCGTCCTCGCATATCCAAGGCTGTGTCTCCCTTCAGCATCACCACTCGGTAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000417516.1 ENST00000435042.1 ENST00000458509.1 |
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| CDS CAA 72 bp | AAAAGCCGAGTGGTGATGCTGAAGGGAGACACAGCCTaGGATATGCGAGGACGATGCAGTGCTGGACAAAAG | + |
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Preference number: 6 (lower is better) Translates to: KSRVVMLKGDTA*DMRGRCSAGQK Trigger: CTTTTGTCCAGCACTGCATCGTCCTCGCATATCCAAGGCTGTGTCTCCCTTCAGCATCACCACTCGGCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457489.1 |
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| CDS CAA 90 bp | CGGAATTATAACTACCGAGTGGTGATGCTGAAGGGAGACACAGCCTaGGATATGCGAGGACGATGCAGTGCTGGACAAAAGGCAGGTATC | + |
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Preference number: 6 (lower is better) Translates to: RNYNYRVVMLKGDTA*DMRGRCSAGQKAGI Trigger: GATACCTGCCTTTTGTCCAGCACTGCATCGTCCTCGCATATCCAAGGCTGTGTCTCCCTTCAGCATCACCACTCGGTAGTTATAATTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000417516.1 ENST00000435042.1 ENST00000458509.1 |
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| CDS CCA 72 bp | GAATCCAGTCATGGGTTCTTAGCTTCTCTTTCTGGTTaGACCAGTAAAGCCTCTTCCTCATCCCTCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: ESSHGFLASLSG*TSKASSSSLFS Trigger: AGAAAAGAGGGATGAGGAAGAGGCTTTACTGGTCCAACCAGAAAGAGAAGCTAAGAACCCATGACTGGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457489.1 |
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