RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TGM6 (Homo sapiens)

Ensembl gene IDs: ENSG00000166948

Ensembl transcript IDs: ENST00000202625.7, ENST00000381423.1, ENST00000477505.1

Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATaGTCCATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCT +
Preference number: 1 (lower is better)
Translates to: GRRRTGAKSTPLSPS*SITWQWPHGRSQSP
Trigger: AGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381423.1
3UTR TCA 90 bp GCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAAGTaGGGGCTTACAAGGTCCACCTGCAGCTGCCTTGGGCCACTTTTG +
Preference number: 1 (lower is better)
Translates to: AVATWTITKPLMSGK*GLTRSTCSCLGPLL
Trigger: CAAAAGTGGCCCAAGGCAGCTGCAGGTGGACCTTGTAAGCCCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381423.1
3UTR-3UTR TCA 90 bp CAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCACCGATCACAAAGCCCTTaGTGTCCGGGAAGTGAGGGC +
Preference number: 2 (lower is better)
Translates to: QEEDRGQIHPSQSLMIHHRSQSP*CPGSEG
Trigger: GCCCTCACTTCCCGGACATCAAGGGCTTTGTGATCG...GTGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381423.1
3UTR CAA 90 bp GACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCACTaGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGG +
Preference number: 2 (lower is better)
Translates to: DRGQIHPSQSLMIHH*AVATWTITKPLMSG
Trigger: CCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381423.1
3UTR-3UTR CCA 90 bp CCATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAACACCTGCAGCTGCCTTaGGCCACTTTTGGAGGGGGT +
Preference number: 2 (lower is better)
Translates to: PSLGSGHMDDHKALDVREHLQLP*ATFGGG
Trigger: ACCCCCTCCAAAAGTGGCCCAAGGCAGCTGCAGGTG...TTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381423.1
3UTR-3UTR CCA 90 bp GCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCATTAACTGAGGCCTCCTaGCTCCCATGTGGAAGAGAC +
Preference number: 2 (lower is better)
Translates to: AGGGQGPNPPLSVPHDPSLTEAS*LPCGRD
Trigger: GTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAA...TGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381423.1
3UTR-3UTR TCA 90 bp TTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGGAGGATTGATGTCCGGGAAGTaGGGGCTTACAAGGTCCACC +
Preference number: 2 (lower is better)
Translates to: LTEASWLPCGRDKEWAGGLMSGK*GLTRST
Trigger: GGTGGACCTTGTAAGCCCTCACTTCCCGGACATCAA...TCCTCCTGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381423.1
3UTR-3UTR CAA 90 bp GGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAAGTGAGGGCTCCACCTGCAGCTGCCTaGGGCCACTTTTGGAGGGGG +
Preference number: 3 (lower is better)
Translates to: GSGHMDDHKALDVREVRAPPAAA*GHFWRG
Trigger: CCCCCTCCAAAAGTGGCCCAAGGCAGCTGCAGGTGG...AGCCCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381423.1
3UTR TCA 72 bp ACATGGACGATCACAAAGCCCTTGATGTCCGGGAAGTaGGGGCTTACAAGGTCCACCTGCAGCTGCCTTGGG +
Preference number: 3 (lower is better)
Translates to: TWTITKPLMSGK*GLTRSTCSCLG
Trigger: CCCAAGGCAGCTGCAGGTGGACCTTGTAAGCCCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381423.1
3UTR TCA 72 bp AGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATaGTCCATCACTTGGCAGTGGCCACATGGACGATCA +
Preference number: 3 (lower is better)
Translates to: RTGAKSTPLSPS*SITWQWPHGRS
Trigger: TGATCGTCCATGTGGCCACTGCCAAGTGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381423.1
3UTR TCA 72 bp ACTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTaGTGTCCGGGAAGTGAGGGCTTACAAGGTCCACCT +
Preference number: 3 (lower is better)
Translates to: TWQWPHGRSQSP*CPGSEGLQGPP
Trigger: AGGTGGACCTTGTAAGCCCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR TCA 90 bp AAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGCCTCGCGGATGGCGGTaGCTGAGGCTGGGCCGCACC +
Preference number: 4 (lower is better)
Translates to: KNGQEEDRGQIHPSQSLMPRGWR*LRLGRT
Trigger: GGTGCGGCCCAGCCTCAGTCACCGCCATCCGCGAGG...CATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp ACAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCGCGGATGGCGGTGACTaGGGCTGGGCCGCACCGGAA +
Preference number: 4 (lower is better)
Translates to: TKNGQEEDRGQIHPSQSLADGGD*GWAAPE
Trigger: TTCCGGTGCGGCCCAGCCTCAGTCACCGCCATCCGC...GAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp AAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGTGGCACCGCTCAGGTTaGCCCTCACCCGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: KNGQEEDRGQIHPSQSLMWHRSG*PSPAGP
Trigger: GGGCCCAGCGGGTGAGGGTCAACCTGAGCGGTGCCA...CATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp GCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCATGGCACCGCTCAGGTTaGCCCTCACCCGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: AGGGQGPNPPLSVPHDPSWHRSG*PSPAGP
Trigger: GGGCCCAGCGGGTGAGGGTCAACCTGAGCGGTGCCA...TGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR GCA 90 bp GAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATGCAGAATGGCCACGCTaGCGCGCCAGTGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: EWAGGGQGPNPPLSVPHDAEWPR*RASAAG
Trigger: GCCCGCTGCACTGGCGCGGCAGCGTGGCCATTCTGC...ATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp GAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATAGTGCAGCGGGCTGGTaGCGCCGCCGTACTTGCCCT +
Preference number: 4 (lower is better)
Translates to: EWAGGGQGPNPPLSVPHDSAAGW*RRRTCP
Trigger: AGGGCAAGTACGGCGGCGGCACCAGCCCGCTGCACT...ATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp AATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCGGGCAGGGGTACTCCTaGGTGTGGTGGGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: NGQEEDRGQIHPSQSLMIGQGYS*VWWAAP
Trigger: TGGCGCTGCCCACCACACCCAGGAGTACCCCTGCCC...GATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp AAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGGCAGGTAGCGGCCAATaGCAGCACTGGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KNGQEEDRGQIHPSQSLMAGSGQ*QHWEGW
Trigger: CCAGCCCTCCCAGTGCTGTCATTGGCCGCTACCTGC...CATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp GACGATCACAAAGCCCTTGATGTCCGGGAAGTGAGGGCTTACAAGGTCCACCTGGCGGATGGCGGTGACTaGGGCTGGGCCGCACCGGAA +
Preference number: 4 (lower is better)
Translates to: DDHKALDVREVRAYKVHLADGGD*GWAAPE
Trigger: TTCCGGTGCGGCCCAGCCTCAGTCACCGCCATCCGC...CAGGTGGACCTTGTAAGCCCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR TCA 90 bp TTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGGAGGACCTCGCGGATGGCGGTaGCTGAGGCTGGGCCGCACC +
Preference number: 4 (lower is better)
Translates to: LTEASWLPCGRDKEWAGGPRGWR*LRLGRT
Trigger: GGTGCGGCCCAGCCTCAGTCACCGCCATCCGCGAGG...TCCTCCTGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp CATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAAGGCTGGGCCCGGGAGGTaGGGTTGGCCAAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: HHLAVATWTITKPLMSGKAGPGR*GWPSTG
Trigger: CCCTGTGCTTGGCCAACCTCACCTCCCGGGCCCAGC...CTTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR GCA 90 bp GAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCTGAGCCTCCCTTGCTaGTGTCCAGCCCTCACCCCG +
Preference number: 4 (lower is better)
Translates to: EWAGGGQGPNPPLSVPHDLSLPC*CPALTP
Trigger: CGGGGTGAGGGCTGGACAGCAGCAAGGGAGGCTCAG...ATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp GAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCACTTGGGGCAGGGGTACTCCTaGGTGTGGTGGGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: EEDRGQIHPSQSLMIHHLGQGYS*VWWAAP
Trigger: TGGCGCTGCCCACCACACCCAGGAGTACCCCTGCCC...CAAGTGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR TCA 90 bp AAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGACGAAGGGGCCATCGTaGGCCAGGTGCACATCACCC +
Preference number: 4 (lower is better)
Translates to: KNGQEEDRGQIHPSQSLMTKGPS*ARCTSP
Trigger: GGGTGATGTGCACCTGGCTCACGATGGCCCCTTCGT...CATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp CAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCACACGAAGGGGCCATCGTaGGCCAGGTGCACATCACCC +
Preference number: 4 (lower is better)
Translates to: QEEDRGQIHPSQSLMIHHTKGPS*ARCTSP
Trigger: GGGTGATGTGCACCTGGCTCACGATGGCCCCTTCGT...GTGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR TCA 90 bp GCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGCTGGGCCCGGGAGGTaGGGTTGGCCAAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: AGLTEASWLPCGRDKEWAAGPGR*GWPSTG
Trigger: CCCTGTGCTTGGCCAACCTCACCTCCCGGGCCCAGC...TGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp CAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCACGCCCAGCCTCCGGTTaGTGTGTTTGCGGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: QRMGRRRTGAKSTPLSPSRPASG*CVCGER
Trigger: CCTCTCACCGCAAACACAGCAACCGGAGGCTGGGCG...TGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp GAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATTGCCGCCGCCGTACTTaGCCTGCCACTGTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: EWAGGGQGPNPPLSVPHDCRRRT*PATVLA
Trigger: TGCAAGGACAGTGGCAGGGCAAGTACGGCGGCGGCA...ATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp GAGGCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGAATGGCCACGCTaGCGCGCCAGTGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: EAGLTEASWLPCGRDKEWAEWPR*RASAAG
Trigger: GCCCGCTGCACTGGCGCGGCAGCGTGGCCATTCTGC...CCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp AAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGGTGAGGCTGAACGACTaGCCCCTGCGAACCACCAGC +
Preference number: 4 (lower is better)
Translates to: KNGQEEDRGQIHPSQSLMVRLND*PLRTTS
Trigger: GCTGGTGGTTCGCAGGGGCCAGTCGTTCAGCCTCAC...CATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp GCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGCCAGTGCAGCGGGCTaGTGCCGCCGCCGTACTTGC +
Preference number: 4 (lower is better)
Translates to: AGLTEASWLPCGRDKEWAASAAG*CRRRTC
Trigger: GCAAGTACGGCGGCGGCACCAGCCCGCTGCACTGGC...TGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp GAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATGCCACTTCTGCAGAATaGCCACGCTGCCGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: EWAGGGQGPNPPLSVPHDATSAE*PRCRAS
Trigger: ACTGGCGCGGCAGCGTGGCCATTCTGCAGAAGTGGC...ATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp GAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCGATGCTGGGCTTGGTaGCAGGCTCCAGGAGGTCGT +
Preference number: 4 (lower is better)
Translates to: EWAGGGQGPNPPLSVPHDRCWAW*QAPGGR
Trigger: ACGACCTCCTGGAGCCTGCCACCAAGCCCAGCATCG...ATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp GCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCAGCCAGTCTCAGGTCGTaGCCCAGCATGGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: AGGGQGPNPPLSVPHDPSASLRS*PSMGGS
Trigger: AGAGCCTCCCATGCTGGGCCACGACCTGAGACTGGC...TGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR TCA 90 bp CCATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAAGCAGGTAGCGGCCAATaGCAGCACTGGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PSLGSGHMDDHKALDVREAGSGQ*QHWEGW
Trigger: CCAGCCCTCCCAGTGCTGTCATTGGCCGCTACCTGC...TTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR TCA 90 bp ACAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCGGTGAGAGGAAAGCCTaGTGCTCAGCAGGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: TKNGQEEDRGQIHPSQSLGERKA*CSAGSG
Trigger: GCCGCTACCTGCTGAGCATCAGGCTTTCCTCTCACC...GAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp CCATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAACTGAGCCTCCCTTGCTaGTGTCCAGCCCTCACCCCG +
Preference number: 4 (lower is better)
Translates to: PSLGSGHMDDHKALDVRELSLPC*CPALTP
Trigger: CGGGGTGAGGGCTGGACAGCAGCAAGGGAGGCTCAG...TTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR GCA 90 bp CAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCACATCTGAGCCTCCCTTaGTGCTGTCCAGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: QRMGRRRTGAKSTPLSPSHLSLP*CCPALT
Trigger: GGTGAGGGCTGGACAGCAGCAAGGGAGGCTCAGATG...TGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp AATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCCCTGCCACTGTCCTTaGACCACACCTCGGTCGTTG +
Preference number: 4 (lower is better)
Translates to: NGQEEDRGQIHPSQSLMIPCHCP*TTPRSL
Trigger: CAACGACCGAGGTGTGGTGCAAGGACAGTGGCAGGG...GATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp GGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCACTTTGCCGCCGCCGTACTTaGCCTGCCACTGTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: GGGQGPNPPLSVPHDPSLCRRRT*PATVLA
Trigger: TGCAAGGACAGTGGCAGGGCAAGTACGGCGGCGGCA...AAGTGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR GCA 90 bp TTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGGAGGAAGTGCAGCGGGCTGGTaGCGCCGCCGTACTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LTEASWLPCGRDKEWAGGSAAGW*RRRTCP
Trigger: AGGGCAAGTACGGCGGCGGCACCAGCCCGCTGCACT...TCCTCCTGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp AAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGAGGGGCCTAGGTCCTaGCGGGCAAACCAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: KEWAGGGQGPNPPLSVPHEGPRS*RANQLS
Trigger: TGAGAGCTGGTTTGCCCGGCAGGACCTAGGCCCCTC...ATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp GCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCATACTCCTGGGTGTGGTaGGCAGCGCCATTCCTCGAC +
Preference number: 4 (lower is better)
Translates to: AGGGQGPNPPLSVPHDPSYSWVW*AAPFLD
Trigger: GTCGAGGAATGGCGCTGCCCACCACACCCAGGAGTA...TGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CCA 90 bp AAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGGGTACTCCTGGGTGTaGTGGGCAGCGCCATTCCTC +
Preference number: 4 (lower is better)
Translates to: KEWAGGGQGPNPPLSVPHGYSWV*WAAPFL
Trigger: GAGGAATGGCGCTGCCCACCACACCCAGGAGTACCC...ATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp AAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGTGAGGCTGAACGACTaGCCCCTGCGAACCACCAGC +
Preference number: 4 (lower is better)
Translates to: KEWAGGGQGPNPPLSVPHVRLND*PLRTTS
Trigger: GCTGGTGGTTCGCAGGGGCCAGTCGTTCAGCCTCAC...ATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp AAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATCGATGCTGGGCTTGGTaGCAGGCTCCAGGAGGTCGT +
Preference number: 4 (lower is better)
Translates to: KEWAGGGQGPNPPLSVPHRCWAW*QAPGGR
Trigger: ACGACCTCCTGGAGCCTGCCACCAAGCCCAGCATCG...ATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp AATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCACTTGCCAGCGATGCTaGGCTTGGTGGCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: NGQEEDRGQIHPSQSLMITCQRC*AWWQAP
Trigger: TGGAGCCTGCCACCAAGCCCAGCATCGCTGGCAAGT...GATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp GAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATATGCTGAGCTGTTCCTaGAGAAGGCCGCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: EWAGGGQGPNPPLSVPHDMLSCS*RRPLPS
Trigger: GGAGGGCAGCGGCCTTCTCCAGGAACAGCTCAGCAT...ATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000202625.7
CDS-3UTR TCA 90 bp CAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCACCTATCCCCAAGCACCTaGGGACTGTGCACAGGACTC +
Preference number: 4 (lower is better)
Translates to: QEEDRGQIHPSQSLMIHHLSPST*GLCTGL
Trigger: GAGTCCTGTGCACAGTCCTCAGGTGCTTGGGGATAG...GTGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR TCA 90 bp ACAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCTGTCGTGGGCTGAGTTaGAGTTGGACACGACCCGTG +
Preference number: 4 (lower is better)
Translates to: TKNGQEEDRGQIHPSQSLCRGLS*SWTRPV
Trigger: CACGGGTCGTGTCCAACTTCAACTCAGCCCACGACA...GAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp ACAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCGAGGCTCTAGCACCTTaGACTTGCCAGCGATGCTGG +
Preference number: 4 (lower is better)
Translates to: TKNGQEEDRGQIHPSQSLEALAP*TCQRCW
Trigger: CCAGCATCGCTGGCAAGTTCAAGGTGCTAGAGCCTC...GAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp AATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCGATGTCAAACTGGACTaGGGCCCTCTCCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: NGQEEDRGQIHPSQSLMIDVKLD*GPLLRL
Trigger: GAGCCTCAGGAGAGGGCCTCAGTCCAGTTTGACATC...GATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp CAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCACGATGTCAAACTGGACTaGGGCCCTCTCCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: QEEDRGQIHPSQSLMIHHDVKLD*GPLLRL
Trigger: GAGCCTCAGGAGAGGGCCTCAGTCCAGTTTGACATC...GTGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR TCA 90 bp ACAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCCGATCACAAAGCCCTTaGTGTCCGGGAAGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: TKNGQEEDRGQIHPSQSLRSQSP*CPGSEG
Trigger: GCCCTCACTTCCCGGACATCAAGGGCTTTGTGATCG...GAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp CAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCACCATTCCTCGACCGCTaGCAGTCCACCTTGGTGACT +
Preference number: 4 (lower is better)
Translates to: QRMGRRRTGAKSTPLSPSPFLDR*QSTLVT
Trigger: AGTCACCAAGGTGGACTGGCAGCGGTCGAGGAATGG...TGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp AAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATCCCTGGGCTCGTATGTaGTTCTCCACGCCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: KEWAGGGQGPNPPLSVPHPWARM*FSTPRK
Trigger: CTTCCGAGGCGTGGAGAAGCACATACGAGCCCAGGG...ATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp AAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATCCGCCGTACTTGCCCTaGCACTGTCCTTGCACCACA +
Preference number: 4 (lower is better)
Translates to: KEWAGGGQGPNPPLSVPHPPYLP*HCPCTT
Trigger: TGTGGTGCAAGGACAGTGGCAGGGCAAGTACGGCGG...ATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp AAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATAGCGACCCCCAGCCCTaGGGATCCAGATTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: KEWAGGGQGPNPPLSVPHSDPQP*GSRFSF
Trigger: GAAGGAGAATCTGGATCCGCAGGGCTGGGGGTCGCT...ATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp GGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCACTTGGACACGTCGGTGGCTaGGTTGTTTTGGTGACCGGG +
Preference number: 4 (lower is better)
Translates to: GGGQGPNPPLSVPHDPSLGHVGG*VVLVTG
Trigger: CCCGGTCACCAAAACAACCCAGCCACCGACGTGTCC...AAGTGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CCA 90 bp ACAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCGGCAGGACACGTCGGTaGCTGGGTTGTTTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: TKNGQEEDRGQIHPSQSLGRTRR*LGCFGD
Trigger: GTCACCAAAACAACCCAGCCACCGACGTGTCCTGCC...GAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp CAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCAGGCAGGACACGTCGGTaGCTGGGTTGTTTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: QRMGRRRTGAKSTPLSPSGRTRR*LGCFGD
Trigger: GTCACCAAAACAACCCAGCCACCGACGTGTCCTGCC...TGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp GACGATCACAAAGCCCTTGATGTCCGGGAAGTGAGGGCTTACAAGGTCCACCTGGCCACTTCTGCAGAATaGCCACGCTGCCGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: DDHKALDVREVRAYKVHLATSAE*PRCRAS
Trigger: ACTGGCGCGGCAGCGTGGCCATTCTGCAGAAGTGGC...CAGGTGGACCTTGTAAGCCCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CCA 90 bp GAGGCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGTTGACCCTCACCCGCTaGGCCCGGGAGGTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: EAGLTEASWLPCGRDKEWLTLTR*AREVRL
Trigger: CAACCTCACCTCCCGGGCCCAGCGGGTGAGGGTCAA...CCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp GAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCTGTCTCTCCTCCTCTaGGGCCAGAAACACATCGTC +
Preference number: 4 (lower is better)
Translates to: EWAGGGQGPNPPLSVPHDLSLLL*GQKHIV
Trigger: GACGATGTGTTTCTGGCCTCAGAGGAGGAGAGACAG...ATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp GGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAAGTGAGGGCTTACAAGGCTGGGTTGTTTTGGTaGCCGGGGCTTCGATCCAGG +
Preference number: 4 (lower is better)
Translates to: GHMDDHKALDVREVRAYKAGLFW*PGLRSR
Trigger: CCTGGATCGAAGCCCCGGTCACCAAAACAACCCAGC...CTTGTAAGCCCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR TCA 90 bp CAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCAGCTTGTACCTGCCCTTaGGCCACTTCTGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: QRMGRRRTGAKSTPLSPSACTCP*ATSAEW
Trigger: CCATTCTGCAGAAGTGGCTCAAGGGCAGGTACAAGC...TGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp GAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCACTTGAGCACTGGCCGTACTTaGCTGGCTTGTACCTGCCCT +
Preference number: 4 (lower is better)
Translates to: EEDRGQIHPSQSLMIHHLSTGRT*LACTCP
Trigger: AGGGCAGGTACAAGCCAGTCAAGTACGGCCAGTGCT...CAAGTGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR TCA 90 bp GAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCACTTGTGTCGTGGGCTGAGTTaGAGTTGGACACGACCCGTG +
Preference number: 4 (lower is better)
Translates to: EEDRGQIHPSQSLMIHHLCRGLS*SWTRPV
Trigger: CACGGGTCGTGTCCAACTTCAACTCAGCCCACGACA...CAAGTGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR TCA 90 bp AAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGCCACCGCCTTGGTGCTaGTGCATCTCCCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: KNGQEEDRGQIHPSQSLMPPPWC*CISQSS
Trigger: AGAAGATTGGGAGATGCATCAGCACCAAGGCGGTGG...CATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp AATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCCACCGCCTTGGTGCTaGTGCATCTCCCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: NGQEEDRGQIHPSQSLMIPPPWC*CISQSS
Trigger: AGAAGATTGGGAGATGCATCAGCACCAAGGCGGTGG...GATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp AAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGCCTCTCAGTCCCTCATaGTCCATCACTTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: KNGQEEDRGQIHPSQSLMPLSPS*SITWQW
Trigger: CCACTGCCAAGTGATGGATCATGAGGGACTGAGAGG...CATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp GAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCTCTCAGTCCCTCATaGTCCATCACTTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: EWAGGGQGPNPPLSVPHDPLSPS*SITWQW
Trigger: CCACTGCCAAGTGATGGATCATGAGGGACTGAGAGG...ATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp TTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGGAGGACGCCCAGCCTCCGGTTaGTGTGTTTGCGGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: LTEASWLPCGRDKEWAGGRPASG*CVCGER
Trigger: CCTCTCACCGCAAACACAGCAACCGGAGGCTGGGCG...TCCTCCTGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp GGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAAGTGAGGGCTTACAAGCCCTGGGCTCGTATGTaGTTCTCCACGCCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: GHMDDHKALDVREVRAYKPWARM*FSTPRK
Trigger: CTTCCGAGGCGTGGAGAAGCACATACGAGCCCAGGG...CTTGTAAGCCCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR GCA 90 bp CCATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAACCGCCGTACTTGCCCTaGCACTGTCCTTGCACCACA +
Preference number: 4 (lower is better)
Translates to: PSLGSGHMDDHKALDVREPPYLP*HCPCTT
Trigger: TGTGGTGCAAGGACAGTGGCAGGGCAAGTACGGCGG...TTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR GCA 90 bp ATGGACGATCACAAAGCCCTTGATGTCCGGGAAGTGAGGGCTTACAAGGTCCACGAGGGGCCTAGGTCCTaGCGGGCAAACCAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: MDDHKALDVREVRAYKVHEGPRS*RANQLS
Trigger: TGAGAGCTGGTTTGCCCGGCAGGACCTAGGCCCCTC...GTGGACCTTGTAAGCCCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR GCA 90 bp ACAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCGCCTGTTCACCGCCTTaGTGTACACCTGCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: TKNGQEEDRGQIHPSQSLACSPP*CTPASL
Trigger: AAGAGAGGCAGGTGTACAGCAAGGCGGTGAACAGGC...GAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp CAGTCCCTCATGATCCATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCAGCGACCCCCAGCCCTaGGGATCCAGATTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QSLMIHHLAVATWTITKPSDPQP*GSRFSF
Trigger: GAAGGAGAATCTGGATCCGCAGGGCTGGGGGTCGCT...GGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGGATCATGAGGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CCA 90 bp GAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCATGTGAAGGCCAGCTaGACTCCTCTGTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: EWAGGGQGPNPPLSVPHDHVKAS*TPLFLH
Trigger: GTGGAGGAACAGAGGAGTCCAGCTGGCCTTCACATG...ATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp CTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAAGTGAGGAACACAGCTTTGGTGTaGAGGGCCTCAGAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: LGSGHMDDHKALDVREVRNTALV*RASEAR
Trigger: CCGGGCTTCTGAGGCCCTCCACACCAAAGCTGTGTT...CCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CCA 90 bp GAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCTGGCCGTACTTGACTaGCTTGTACCTGCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: EWAGGGQGPNPPLSVPHDLAVLD*LVPALE
Trigger: CTCAAGGGCAGGTACAAGCCAGTCAAGTACGGCCAG...ATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp AAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGCTGGCCGTACTTGACTaGCTTGTACCTGCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: KNGQEEDRGQIHPSQSLMLAVLD*LVPALE
Trigger: CTCAAGGGCAGGTACAAGCCAGTCAAGTACGGCCAG...CATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp AAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGTCCACACTCAGGTTCTaGTCTGTGTCGTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: KNGQEEDRGQIHPSQSLMSTLRF*SVSWAE
Trigger: CTCAGCCCACGACACAGACCAGAACCTGAGTGTGGA...CATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp CAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATCCACACTCAGGTTCTaGTCTGTGTCGTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: QRMGRRRTGAKSTPLSPSSTLRF*SVSWAE
Trigger: CTCAGCCCACGACACAGACCAGAACCTGAGTGTGGA...TGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp CCATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAAACTTGCCAGCGATGCTaGGCTTGGTGGCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PSLGSGHMDDHKALDVRETCQRC*AWWQAP
Trigger: TGGAGCCTGCCACCAAGCCCAGCATCGCTGGCAAGT...TTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CCA 90 bp GAGGCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCCAGTCTCAGGTCGTaGCCCAGCATGGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: EAGLTEASWLPCGRDKEWASLRS*PSMGGS
Trigger: AGAGCCTCCCATGCTGGGCCACGACCTGAGACTGGC...CCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp GACGATCACAAAGCCCTTGATGTCCGGGAAGTGAGGGCTTACAAGGTCCACCTGGAGGGCTGGCGAGACTaGCGGTCAGAGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: DDHKALDVREVRAYKVHLEGWRD*RSEFSP
Trigger: TGGAGAAAACTCTGACCGTCAGTCTCGCCAGCCCTC...CAGGTGGACCTTGTAAGCCCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR TCA 90 bp AAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGTTGCTGTGTTTGCGGTaGGAGGAAAGCCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: KNGQEEDRGQIHPSQSLMLLCLR*EESLML
Trigger: GAGCATCAGGCTTTCCTCTCACCGCAAACACAGCAA...CATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp GCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGCTGGGTTGTTTTGGTaGCCGGGGCTTCGATCCAGG +
Preference number: 4 (lower is better)
Translates to: AGLTEASWLPCGRDKEWAAGLFW*PGLRSR
Trigger: CCTGGATCGAAGCCCCGGTCACCAAAACAACCCAGC...TGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp AAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGCTTGTACCTGCCCTTaGGCCACTTCTGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: KEWAGGGQGPNPPLSVPHACTCP*ATSAEW
Trigger: CCATTCTGCAGAAGTGGCTCAAGGGCAGGTACAAGC...ATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp GAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCACTTTTGGAGGGGGTaGTGTCAAACTGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: EWAGGGQGPNPPLSVPHDHFWRG*CQTGLR
Trigger: CCTCAGTCCAGTTTGACATCACCCCCTCCAAAAGTG...ATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp GCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCACACTTTTGGAGGGGGTaGTGTCAAACTGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: AGGGQGPNPPLSVPHDPSHFWRG*CQTGLR
Trigger: CCTCAGTCCAGTTTGACATCACCCCCTCCAAAAGTG...TGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR TCA 90 bp CATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAAGCGATCACAAAGCCCTTaGTGTCCGGGAAGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: HHLAVATWTITKPLMSGKRSQSP*CPGSEG
Trigger: GCCCTCACTTCCCGGACATCAAGGGCTTTGTGATCG...CTTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR GCA 90 bp ATGGACGATCACAAAGCCCTTGATGTCCGGGAAGTGAGGGCTTACAAGGTCCACCCCTGCCACTGTCCTTaGACCACACCTCGGTCGTTG +
Preference number: 4 (lower is better)
Translates to: MDDHKALDVREVRAYKVHPCHCP*TTPRSL
Trigger: CAACGACCGAGGTGTGGTGCAAGGACAGTGGCAGGG...GTGGACCTTGTAAGCCCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR GCA 90 bp GCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCACCCTTGAGCCACTTCTaGAGAATGGCCACGCTGCCG +
Preference number: 4 (lower is better)
Translates to: AGLTEASWLPCGRDKEWAPLSHF*RMATLP
Trigger: CGGCAGCGTGGCCATTCTGCAGAAGTGGCTCAAGGG...TGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp ATGGACGATCACAAAGCCCTTGATGTCCGGGAAGTGAGGGCTTACAAGGTCCACCCCTTGAGCCACTTCTaGAGAATGGCCACGCTGCCG +
Preference number: 4 (lower is better)
Translates to: MDDHKALDVREVRAYKVHPLSHF*RMATLP
Trigger: CGGCAGCGTGGCCATTCTGCAGAAGTGGCTCAAGGG...GTGGACCTTGTAAGCCCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR GCA 90 bp CTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAAGTGAGGGCCTGTTCACCGCCTTaGTGTACACCTGCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LGSGHMDDHKALDVREVRACSPP*CTPASL
Trigger: AAGAGAGGCAGGTGTACAGCAAGGCGGTGAACAGGC...CCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR GCA 90 bp AAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATTCTCTGCCACTGGCTTaGGGGTATAGAGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: KEWAGGGQGPNPPLSVPHSLPLA*GYRGWW
Trigger: CCACCATCCTCTATACCCGCAAGCCAGTGGCAGAGA...ATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp AAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATCTTACAAGGTCCACCTaGAGCTGCCTTGGGCCACTT +
Preference number: 4 (lower is better)
Translates to: KEWAGGGQGPNPPLSVPHLTRST*SCLGPL
Trigger: AAGTGGCCCAAGGCAGCTGCAGGTGGACCTTGTAAG...ATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp TTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGGAGGATACTCCTGGGTGTGGTaGGCAGCGCCATTCCTCGAC +
Preference number: 4 (lower is better)
Translates to: LTEASWLPCGRDKEWAGGYSWVW*AAPFLD
Trigger: GTCGAGGAATGGCGCTGCCCACCACACCCAGGAGTA...TCCTCCTGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp AAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGTCTGGAACACAGCTTTaGTGTGGAGGGCCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: KNGQEEDRGQIHPSQSLMSGTQL*CGGPQK
Trigger: CTTCTGAGGCCCTCCACACCAAAGCTGTGTTCCAGA...CATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp GAGGCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGGACACGTCGGTGGCTaGGTTGTTTTGGTGACCGGG +
Preference number: 4 (lower is better)
Translates to: EAGLTEASWLPCGRDKEWGHVGG*VVLVTG
Trigger: CCCGGTCACCAAAACAACCCAGCCACCGACGTGTCC...CCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp AATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCAGGATCTCTGCCACTaGCTTGCGGGTATAGAGGAT +
Preference number: 4 (lower is better)
Translates to: NGQEEDRGQIHPSQSLMIQDLCH*LAGIED
Trigger: ATCCTCTATACCCGCAAGCCAGTGGCAGAGATCCTG...GATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp CCATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAACCCAGCCTCACGGCGTaGGATTCATGCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: PSLGSGHMDDHKALDVREPSLTA*DSCRIS
Trigger: AGAGATCCTGCATGAATCCCACGCCGTGAGGCTGGG...TTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CCA 90 bp TTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGGAGGACACCTGCAGCTGCCTTaGGCCACTTTTGGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LTEASWLPCGRDKEWAGGHLQLP*ATFGGG
Trigger: ACCCCCTCCAAAAGTGGCCCAAGGCAGCTGCAGGTG...TCCTCCTGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp AAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGCTCCTGGCTCCCATGTaGAAGAGACAAAGAATGGGC +
Preference number: 4 (lower is better)
Translates to: KNGQEEDRGQIHPSQSLMLLAPM*KRQRMG
Trigger: GCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAG...CATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp AATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCTTAACTGAGGCCTCCTaGCTCCCATGTGGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: NGQEEDRGQIHPSQSLMILTEAS*LPCGRD
Trigger: GTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAA...GATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp TTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGGAGGAGAGGGCTGGCGAGACTaGCGGTCAGAGTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LTEASWLPCGRDKEWAGGEGWRD*RSEFSP
Trigger: TGGAGAAAACTCTGACCGTCAGTCTCGCCAGCCCTC...TCCTCCTGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp ACAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCCTGCACACCATGGGTTaGAAAGGAGAACAAACTCGC +
Preference number: 4 (lower is better)
Translates to: TKNGQEEDRGQIHPSQSLLHTMG*KGEQTR
Trigger: GCGAGTTTGTTCTCCTTTTCAACCCATGGTGTGCAG...GAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp GAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCTGCACACCATGGGTTaGAAAGGAGAACAAACTCGC +
Preference number: 4 (lower is better)
Translates to: EWAGGGQGPNPPLSVPHDLHTMG*KGEQTR
Trigger: GCGAGTTTGTTCTCCTTTTCAACCCATGGTGTGCAG...ATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp GCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAAGCACTGGCCGTACTTaGCTGGCTTGTACCTGCCCT +
Preference number: 4 (lower is better)
Translates to: AGLTEASWLPCGRDKEWASTGRT*LACTCP
Trigger: AGGGCAGGTACAAGCCAGTCAAGTACGGCCAGTGCT...TGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp GAGGCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGCTATCCCCAAGCACCTaGGGACTGTGCACAGGACTC +
Preference number: 4 (lower is better)
Translates to: EAGLTEASWLPCGRDKEWLSPST*GLCTGL
Trigger: GAGTCCTGTGCACAGTCCTCAGGTGCTTGGGGATAG...CCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp CAGTCCCTCATGATCCATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCACTTGTAGAGGTCAGTaGTGTCCACGCGGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: QSLMIHHLAVATWTITKPTCRGQ*CPRGSH
Trigger: GTGACTCCCGCGTGGACATCACTGACCTCTACAAGT...GGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGGATCATGAGGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR TCA 90 bp TTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGGAGGAGAGGCTCTAGCACCTTaGACTTGCCAGCGATGCTGG +
Preference number: 4 (lower is better)
Translates to: LTEASWLPCGRDKEWAGGEALAP*TCQRCW
Trigger: CCAGCATCGCTGGCAAGTTCAAGGTGCTAGAGCCTC...TCCTCCTGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp CCATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAATTGATGTCCGGGAAGTaGGGGCTTACAAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: PSLGSGHMDDHKALDVRELMSGK*GLTRST
Trigger: GGTGGACCTTGTAAGCCCTCACTTCCCGGACATCAA...TTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR GCA 90 bp TTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGGAGGACCATTCCTCGACCGCTaGCAGTCCACCTTGGTGACT +
Preference number: 4 (lower is better)
Translates to: LTEASWLPCGRDKEWAGGPFLDR*QSTLVT
Trigger: AGTCACCAAGGTGGACTGGCAGCGGTCGAGGAATGG...TCCTCCTGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp GAGGCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCCTTGCTGTACACCTaGCTCTCTTTCCGGGACCCT +
Preference number: 4 (lower is better)
Translates to: EAGLTEASWLPCGRDKEWALLYT*LSFRDP
Trigger: AGGGTCCCGGAAAGAGAGGCAGGTGTACAGCAAGGC...CCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp TTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGGAGGAGCCTTGCTGTACACCTaGCTCTCTTTCCGGGACCCT +
Preference number: 4 (lower is better)
Translates to: LTEASWLPCGRDKEWAGGALLYT*LSFRDP
Trigger: AGGGTCCCGGAAAGAGAGGCAGGTGTACAGCAAGGC...TCCTCCTGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp CATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAAGTCTCTGCCACTGGCTTaGGGGTATAGAGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: HHLAVATWTITKPLMSGKSLPLA*GYRGWW
Trigger: CCACCATCCTCTATACCCGCAAGCCAGTGGCAGAGA...CTTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR GCA 90 bp ACAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCTTCATGCAGGATCTCTaGCACTGGCTTGCGGGTATA +
Preference number: 4 (lower is better)
Translates to: TKNGQEEDRGQIHPSQSLFMQDL*HWLAGI
Trigger: TATACCCGCAAGCCAGTGGCAGAGATCCTGCATGAA...GAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp CCATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAACATGTGAAGGCCAGCTaGACTCCTCTGTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PSLGSGHMDDHKALDVREHVKAS*TPLFLH
Trigger: GTGGAGGAACAGAGGAGTCCAGCTGGCCTTCACATG...TTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CCA 90 bp GCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAAACACAGCTTTGGTGTaGAGGGCCTCAGAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: AGLTEASWLPCGRDKEWANTALV*RASEAR
Trigger: CCGGGCTTCTGAGGCCCTCCACACCAAAGCTGTGTT...TGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp GGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCACTTTCTGGAACACAGCTTTaGTGTGGAGGGCCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: GGGQGPNPPLSVPHDPSLSGTQL*CGGPQK
Trigger: CTTCTGAGGCCCTCCACACCAAAGCTGTGTTCCAGA...AAGTGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CCA 90 bp TTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGGAGGACCCAGCCTCACGGCGTaGGATTCATGCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LTEASWLPCGRDKEWAGGPSLTA*DSCRIS
Trigger: AGAGATCCTGCATGAATCCCACGCCGTGAGGCTGGG...TCCTCCTGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp ATGATCCATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCCACCTGCAGCTGCCTTaGGCCACTTTTGGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: MIHHLAVATWTITKPLMSHLQLP*ATFGGG
Trigger: ACCCCCTCCAAAAGTGGCCCAAGGCAGCTGCAGGTG...GGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGGATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CCA 90 bp AAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATTTGGCAGTGGCCACATaGACGATCACAAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: KEWAGGGQGPNPPLSVPHLAVAT*TITKPL
Trigger: CAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAA...ATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp AATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCTCCATCACTTGGCAGTaGCCACATGGACGATCACAA +
Preference number: 4 (lower is better)
Translates to: NGQEEDRGQIHPSQSLMISITWQ*PHGRSQ
Trigger: TTGTGATCGTCCATGTGGCCACTGCCAAGTGATGGA...GATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp CAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATCCATCACTTGGCAGTaGCCACATGGACGATCACAA +
Preference number: 4 (lower is better)
Translates to: QRMGRRRTGAKSTPLSPSSITWQ*PHGRSQ
Trigger: TTGTGATCGTCCATGTGGCCACTGCCAAGTGATGGA...TGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp GAGGCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGCTGTCTCTCCTCCTCTaGGGCCAGAAACACATCGTC +
Preference number: 4 (lower is better)
Translates to: EAGLTEASWLPCGRDKEWLSLLL*GQKHIV
Trigger: GACGATGTGTTTCTGGCCTCAGAGGAGGAGAGACAG...CCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp GAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATAATCTTCTTCGTGTTTaGGTATACACGCTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: EWAGGGQGPNPPLSVPHDNLLRV*VYTLPA
Trigger: AGCCGGGAGCGTGTATACTCAAACACGAAGAAGATT...ATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp TTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGGAGGAACTTGTAGAGGTCAGTaGTGTCCACGCGGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: LTEASWLPCGRDKEWAGGTCRGQ*CPRGSH
Trigger: GTGACTCCCGCGTGGACATCACTGACCTCTACAAGT...TCCTCCTGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
3UTR CAA 72 bp CAAATCCACCCCTCTCAGTCCCTCATGATCCATCACTaGGCAGTGGCCACATGGACGATCACAAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: QIHPSQSLMIHH*AVATWTITKPL
Trigger: CAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGGATCATGAGGGACTGAGAGGGGTGGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR TCA 90 bp GAGGCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGTTGCTGTGTTTGCGGTaGGAGGAAAGCCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: EAGLTEASWLPCGRDKEWLLCLR*EESLML
Trigger: GAGCATCAGGCTTTCCTCTCACCGCAAACACAGCAA...CCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR TCA 90 bp GGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCACTTAATCTTCTTCGTGTTTaGGTATACACGCTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: GGGQGPNPPLSVPHDPSLNLLRV*VYTLPA
Trigger: AGCCGGGAGCGTGTATACTCAAACACGAAGAAGATT...AAGTGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR GCA 90 bp GAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCATGGAAATTCCACATaGTGTCTTCTGTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: EWAGGGQGPNPPLSVPHDHGNST*CLLSGP
Trigger: AGGACCTGACAGAAGACAGCATGTGGAATTTCCATG...ATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp CAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCACATGGAAATTCCACATaGTGTCTTCTGTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: QRMGRRRTGAKSTPLSPSHGNST*CLLSGP
Trigger: AGGACCTGACAGAAGACAGCATGTGGAATTTCCATG...TGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR GCA 90 bp CCATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAATTCATGCAGGATCTCTaGCACTGGCTTGCGGGTATA +
Preference number: 4 (lower is better)
Translates to: PSLGSGHMDDHKALDVREFMQDL*HWLAGI
Trigger: TATACCCGCAAGCCAGTGGCAGAGATCCTGCATGAA...TTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CCA 90 bp CAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCAGTCCTCTGCACACCATaGGTTGAAAAGGAGAACAAA +
Preference number: 4 (lower is better)
Translates to: QRMGRRRTGAKSTPLSPSVLCTP*VEKENK
Trigger: TTTGTTCTCCTTTTCAACCCATGGTGTGCAGAGGAC...TGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp GAGGCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGCAGGATCTCTGCCACTaGCTTGCGGGTATAGAGGAT +
Preference number: 4 (lower is better)
Translates to: EAGLTEASWLPCGRDKEWQDLCH*LAGIED
Trigger: ATCCTCTATACCCGCAAGCCAGTGGCAGAGATCCTG...CCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp GAGGCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGTTGGCAGTGGCCACATaGACGATCACAAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: EAGLTEASWLPCGRDKEWLAVAT*TITKPL
Trigger: CAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAA...CCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp GAGGCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGCTCCTGGCTCCCATGTaGAAGAGACAAAGAATGGGC +
Preference number: 4 (lower is better)
Translates to: EAGLTEASWLPCGRDKEWLLAPM*KRQRMG
Trigger: GCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAG...CCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp TTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGGAGGATTAACTGAGGCCTCCTaGCTCCCATGTGGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: LTEASWLPCGRDKEWAGGLTEAS*LPCGRD
Trigger: GTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAA...TCCTCCTGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp GGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCACTTGTCCTCTGCACACCATaGGTTGAAAAGGAGAACAAA +
Preference number: 4 (lower is better)
Translates to: GGGQGPNPPLSVPHDPSLVLCTP*VEKENK
Trigger: TTTGTTCTCCTTTTCAACCCATGGTGTGCAGAGGAC...AAGTGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CCA 90 bp AATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCTCTCATTCCAGACATaGAAATTCCACATGCTGTCT +
Preference number: 4 (lower is better)
Translates to: NGQEEDRGQIHPSQSLMILSFQT*KFHMLS
Trigger: AGACAGCATGTGGAATTTCCATGTCTGGAATGAGAG...GATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CCA 90 bp GGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCACTTCTCTCATTCCAGACATaGAAATTCCACATGCTGTCT +
Preference number: 4 (lower is better)
Translates to: GGGQGPNPPLSVPHDPSLLSFQT*KFHMLS
Trigger: AGACAGCATGTGGAATTTCCATGTCTGGAATGAGAG...AAGTGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS GCA 90 bp CTGCCGCGCCAGTGCAGCGGGCTGGTGCCGCCGCCGTACTTGCCCTaGCACTGTCCTTGCACCACACCTCGGTCGTTGTTGCTGTTCACC +
Preference number: 5 (lower is better)
Translates to: LPRQCSGLVPPPYLP*HCPCTTPRSLLLFT
Trigger: GGTGAACAGCAACAACGACCGAGGTGTGGTGCAAGGACAGTGGCAGGGCAAGTACGGCGGCGGCACCAGCCCGCTGCACTGGCGCGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000202625.7
ENST00000381423.1
ENST00000477505.1
CDS CCA 90 bp TGGCCCCTGCGAACCACCAGCTCAGGGCAGGGGTACTCCTGGGTGTaGTGGGCAGCGCCATTCCTCGACCGCTGCCAGTCCACCTTGGTG +
Preference number: 5 (lower is better)
Translates to: WPLRTTSSGQGYSWV*WAAPFLDRCQSTLV
Trigger: CACCAAGGTGGACTGGCAGCGGTCGAGGAATGGCGCTGCCCACCACACCCAGGAGTACCCCTGCCCTGAGCTGGTGGTTCGCAGGGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000202625.7
ENST00000381423.1
ENST00000477505.1
CDS CCA 90 bp AACGACTGGCCCCTGCGAACCACCAGCTCAGGGCAGGGGTACTCCTaGGTGTGGTGGGCAGCGCCATTCCTCGACCGCTGCCAGTCCACC +
Preference number: 5 (lower is better)
Translates to: NDWPLRTTSSGQGYS*VWWAAPFLDRCQST
Trigger: GGTGGACTGGCAGCGGTCGAGGAATGGCGCTGCCCACCACACCCAGGAGTACCCCTGCCCTGAGCTGGTGGTTCGCAGGGGCCAGTCGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000202625.7
ENST00000381423.1
ENST00000477505.1
CDS CCA 90 bp CCCCTGCGAACCACCAGCTCAGGGCAGGGGTACTCCTGGGTGTGGTaGGCAGCGCCATTCCTCGACCGCTGCCAGTCCACCTTGGTGACT +
Preference number: 5 (lower is better)
Translates to: PLRTTSSGQGYSWVW*AAPFLDRCQSTLVT
Trigger: AGTCACCAAGGTGGACTGGCAGCGGTCGAGGAATGGCGCTGCCCACCACACCCAGGAGTACCCCTGCCCTGAGCTGGTGGTTCGCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000202625.7
ENST00000381423.1
ENST00000477505.1
CDS GCA 90 bp CACTGGCCGTACTTGACTGGCTTGTACCTGCCCTTGAGCCACTTCTaGAGAATGGCCACGCTGCCGCGCCAGTGCAGCGGGCTGGTGCCG +
Preference number: 5 (lower is better)
Translates to: HWPYLTGLYLPLSHF*RMATLPRQCSGLVP
Trigger: CGGCACCAGCCCGCTGCACTGGCGCGGCAGCGTGGCCATTCTGCAGAAGTGGCTCAAGGGCAGGTACAAGCCAGTCAAGTACGGCCAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000202625.7
ENST00000381423.1
ENST00000477505.1
CDS GCA 90 bp CAGGCTCCAGGAGGTCGTCACGCCAGAGACAGCGACCCCCAGCCCTaGGGATCCAGATTCTCCTTCCAGAGGCTTCCACGCCGAACAGCC +
Preference number: 5 (lower is better)
Translates to: QAPGGRHARDSDPQP*GSRFSFQRLPRRTA
Trigger: GGCTGTTCGGCGTGGAAGCCTCTGGAAGGAGAATCTGGATCCGCAGGGCTGGGGGTCGCTGTCTCTGGCGTGACGACCTCCTGGAGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS CCA 90 bp GCCCGGGAGGTGAGGTTGGCCAAGCACAGGGCCAGTCTCAGGTCGTaGCCCAGCATGGGAGGCTCTAGCACCTTGAACTTGCCAGCGATG +
Preference number: 5 (lower is better)
Translates to: AREVRLAKHRASLRS*PSMGGSSTLNLPAM
Trigger: CATCGCTGGCAAGTTCAAGGTGCTAGAGCCTCCCATGCTGGGCCACGACCTGAGACTGGCCCTGTGCTTGGCCAACCTCACCTCCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp CAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCACGTGGCACCGCTCAGGTaGACCCTCACCCGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: QEEDRGQIHPSQSLMIHHVAPLR*TLTRWA
Trigger: GGCCCAGCGGGTGAGGGTCAACCTGAGCGGTGCCAC...GTGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS GCA 90 bp TGCAGCGGGCTGGTGCCGCCGCCGTACTTGCCCTGCCACTGTCCTTaGACCACACCTCGGTCGTTGTTGCTGTTCACCATGGCACTGATG +
Preference number: 5 (lower is better)
Translates to: CSGLVPPPYLPCHCP*TTPRSLLLFTMALM
Trigger: CATCAGTGCCATGGTGAACAGCAACAACGACCGAGGTGTGGTGCAAGGACAGTGGCAGGGCAAGTACGGCGGCGGCACCAGCCCGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000202625.7
ENST00000381423.1
ENST00000477505.1
CDS CCA 90 bp CGGCCCCAGCCTCACGGCGTGGGATTCATGCAGGATCTCTGCCACTaGCTTGCGGGTATAGAGGATGGTGGCACCGCTCAGGTTGACCCT +
Preference number: 5 (lower is better)
Translates to: RPQPHGVGFMQDLCH*LAGIEDGGTAQVDP
Trigger: AGGGTCAACCTGAGCGGTGCCACCATCCTCTATACCCGCAAGCCAGTGGCAGAGATCCTGCATGAATCCCACGCCGTGAGGCTGGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp GAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCAGCGATGCTGGGCTaGGTGGCAGGCTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: EWAGGGQGPNPPLSVPHDPAMLG*VAGSRR
Trigger: CCTCCTGGAGCCTGCCACCAAGCCCAGCATCGCTGG...ATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp AATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCGCCCGGGAGGTGAGGTaGGCCAAGCACAGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: NGQEEDRGQIHPSQSLMIAREVR*AKHRAS
Trigger: ACTGGCCCTGTGCTTGGCCAACCTCACCTCCCGGGC...GATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp CTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAAGTGAGGGTGCCGCCGCCGTACTaGCCCTGCCACTGTCCTTGC +
Preference number: 5 (lower is better)
Translates to: LGSGHMDDHKALDVREVRVPPPY*PCHCPC
Trigger: GCAAGGACAGTGGCAGGGCAAGTACGGCGGCGGCAC...CCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS GCA 90 bp TTCTTGCGGCCCCAGCCTCACGGCGTGGGATTCATGCAGGATCTCTaGCACTGGCTTGCGGGTATAGAGGATGGTGGCACCGCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: FLRPQPHGVGFMQDL*HWLAGIEDGGTAQV
Trigger: AACCTGAGCGGTGCCACCATCCTCTATACCCGCAAGCCAGTGGCAGAGATCCTGCATGAATCCCACGCCGTGAGGCTGGGGCCGCAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp GAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATGCCCTGCCACTGTCCTaGCACCACACCTCGGTCGTT +
Preference number: 5 (lower is better)
Translates to: EWAGGGQGPNPPLSVPHDALPLS*HHTSVV
Trigger: AACGACCGAGGTGTGGTGCAAGGACAGTGGCAGGGC...ATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp CCATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAACCAGCGATGCTGGGCTaGGTGGCAGGCTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: PSLGSGHMDDHKALDVREPAMLG*VAGSRR
Trigger: CCTCCTGGAGCCTGCCACCAAGCCCAGCATCGCTGG...TTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CAA 90 bp GGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAAGTGAGGGCTTACAAGGCCCGGGAGGTGAGGTaGGCCAAGCACAGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: GHMDDHKALDVREVRAYKAREVR*AKHRAS
Trigger: ACTGGCCCTGTGCTTGGCCAACCTCACCTCCCGGGC...CTTGTAAGCCCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CAA 90 bp TTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGGAGGAGTGGCACCGCTCAGGTaGACCCTCACCCGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LTEASWLPCGRDKEWAGGVAPLR*TLTRWA
Trigger: GGCCCAGCGGGTGAGGGTCAACCTGAGCGGTGCCAC...TCCTCCTGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp AAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATCGCTGCCAGTCCACCTaGGTGACTCTGATCCCTGCC +
Preference number: 5 (lower is better)
Translates to: KEWAGGGQGPNPPLSVPHRCQST*VTLIPA
Trigger: GGCAGGGATCAGAGTCACCAAGGTGGACTGGCAGCG...ATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp GAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATGGTGGCTGGGTTGTTTaGGTGACCGGGGCTTCGATC +
Preference number: 5 (lower is better)
Translates to: EWAGGGQGPNPPLSVPHDGGWVV*VTGASI
Trigger: GATCGAAGCCCCGGTCACCAAAACAACCCAGCCACC...ATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp TTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGGAGGAGTGCCGCCGCCGTACTaGCCCTGCCACTGTCCTTGC +
Preference number: 5 (lower is better)
Translates to: LTEASWLPCGRDKEWAGGVPPPY*PCHCPC
Trigger: GCAAGGACAGTGGCAGGGCAAGTACGGCGGCGGCAC...TCCTCCTGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp AAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGCAGCACTGGCCGTACTaGACTGGCTTGTACCTGCCC +
Preference number: 5 (lower is better)
Translates to: KNGQEEDRGQIHPSQSLMQHWPY*TGLYLP
Trigger: GGGCAGGTACAAGCCAGTCAAGTACGGCCAGTGCTG...CATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp AAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGGATTCTCTTCTCTTCTaGCGGCCCCAGCCTCACGGC +
Preference number: 5 (lower is better)
Translates to: KNGQEEDRGQIHPSQSLMDSLLF*RPQPHG
Trigger: GCCGTGAGGCTGGGGCCGCAAGAAGAGAAGAGAATC...CATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp CAGTCCCTCATGATCCATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCCCACCTGCAGCTGCCTaGGGCCACTTTTGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: QSLMIHHLAVATWTITKPPPAAA*GHFWRG
Trigger: CCCCCTCCAAAAGTGGCCCAAGGCAGCTGCAGGTGG...GGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGGATCATGAGGGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS TCA 90 bp CCACTTTTGGAGGGGGTGATGTCAAACTGGACTGAGGCCCTCTCCTaGGGCTCCAGGGTAGGCACGTCGATGCTGAGCTGTTCCTGGAGA +
Preference number: 5 (lower is better)
Translates to: PLLEGVMSNWTEALS*GSRVGTSMLSCSWR
Trigger: TCTCCAGGAACAGCTCAGCATCGACGTGCCTACCCTGGAGCCTCAGGAGAGGGCCTCAGTCCAGTTTGACATCACCCCCTCCAAAAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000202625.7
CDS-3UTR CAA 90 bp CATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAAGCGCTGCCAGTCCACCTaGGTGACTCTGATCCCTGCC +
Preference number: 5 (lower is better)
Translates to: HHLAVATWTITKPLMSGKRCQST*VTLIPA
Trigger: GGCAGGGATCAGAGTCACCAAGGTGGACTGGCAGCG...CTTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CAA 90 bp GAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCGTACTTGACTGGCTaGTACCTGCCCTTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: EWAGGGQGPNPPLSVPHDPYLTG*YLPLSH
Trigger: GTGGCTCAAGGGCAGGTACAAGCCAGTCAAGTACGG...ATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp GAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATTGGGCTGAGTTGAAGTaGGACACGACCCGTGTGGCT +
Preference number: 5 (lower is better)
Translates to: EWAGGGQGPNPPLSVPHDWAELK*DTTRVA
Trigger: AGCCACACGGGTCGTGTCCAACTTCAACTCAGCCCA...ATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp ACAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCGTGTCGTGGGCTGAGTaGAAGTTGGACACGACCCGT +
Preference number: 5 (lower is better)
Translates to: TKNGQEEDRGQIHPSQSLVSWAE*KLDTTR
Trigger: ACGGGTCGTGTCCAACTTCAACTCAGCCCACGACAC...GAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp CAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCAAGCCTGTTCACCGCCTaGCTGTACACCTGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: QRMGRRRTGAKSTPLSPSSLFTA*LYTCLS
Trigger: AGAGAGGCAGGTGTACAGCAAGGCGGTGAACAGGCT...TGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp TTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGGAGGACCACCTGCAGCTGCCTaGGGCCACTTTTGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: LTEASWLPCGRDKEWAGGPPAAA*GHFWRG
Trigger: CCCCCTCCAAAAGTGGCCCAAGGCAGCTGCAGGTGG...TCCTCCTGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS GCA 90 bp TTCTCCTTCCAGAGGCTTCCACGCCGAACAGCCTGTTCACCGCCTTaGTGTACACCTGCCTCTCTTTCCGGGACCCTTCCGGATACTTGT +
Preference number: 5 (lower is better)
Translates to: FSFQRLPRRTACSPP*CTPASLSGTLPDTC
Trigger: ACAAGTATCCGGAAGGGTCCCGGAAAGAGAGGCAGGTGTACAGCAAGGCGGTGAACAGGCTGTTCGGCGTGGAAGCCTCTGGAAGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp GAGGCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGCCATCTGAGCCTCCCTaGCTGCTGTCCAGCCCTCAC +
Preference number: 5 (lower is better)
Translates to: EAGLTEASWLPCGRDKEWPSEPP*LLSSPH
Trigger: GTGAGGGCTGGACAGCAGCAAGGGAGGCTCAGATGG...CCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp GCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCAACACCTCGGTCGTTGTaGCTGTTCACCATGGCACTG +
Preference number: 5 (lower is better)
Translates to: AGGGQGPNPPLSVPHDPSTPRSL*LFTMAL
Trigger: CAGTGCCATGGTGAACAGCAACAACGACCGAGGTGT...TGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CAA 90 bp GAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATACCACACCTCGGTCGTaGTTGCTGTTCACCATGGCA +
Preference number: 5 (lower is better)
Translates to: EWAGGGQGPNPPLSVPHDTTPRS*LLFTMA
Trigger: TGCCATGGTGAACAGCAACAACGACCGAGGTGTGGT...ATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp CAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCAGGCTTGTACCTGCCCTaGAGCCACTTCTGCAGAATG +
Preference number: 5 (lower is better)
Translates to: QRMGRRRTGAKSTPLSPSGLYLP*SHFCRM
Trigger: CATTCTGCAGAAGTGGCTCAAGGGCAGGTACAAGCC...TGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp ACAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCGGCTTGTACCTGCCCTaGAGCCACTTCTGCAGAATG +
Preference number: 5 (lower is better)
Translates to: TKNGQEEDRGQIHPSQSLGLYLP*SHFCRM
Trigger: CATTCTGCAGAAGTGGCTCAAGGGCAGGTACAAGCC...GAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp CATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAAGCAGCACTGGCCGTACTaGACTGGCTTGTACCTGCCC +
Preference number: 5 (lower is better)
Translates to: HHLAVATWTITKPLMSGKQHWPY*TGLYLP
Trigger: GGGCAGGTACAAGCCAGTCAAGTACGGCCAGTGCTG...CTTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CAA 90 bp GGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGATCCATCACTTAGCCTGTTCACCGCCTaGCTGTACACCTGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: GGGQGPNPPLSVPHDPSLSLFTA*LYTCLS
Trigger: AGAGAGGCAGGTGTACAGCAAGGCGGTGAACAGGCT...AAGTGATGGATCATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CAA 90 bp AAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGTCTAGCACCTTGAACTaGCCAGCGATGCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: KNGQEEDRGQIHPSQSLMSSTLN*PAMLGL
Trigger: CAAGCCCAGCATCGCTGGCAAGTTCAAGGTGCTAGA...CATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp GGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAAGTGAGGGCTTCTAGCACCTTGAACTaGCCAGCGATGCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: GSGHMDDHKALDVREVRASSTLN*PAMLGL
Trigger: CAAGCCCAGCATCGCTGGCAAGTTCAAGGTGCTAGA...AGCCCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CAA 90 bp GGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAAGTGAGGGCTTACAAGGATTCTCTTCTCTTCTaGCGGCCCCAGCCTCACGGC +
Preference number: 5 (lower is better)
Translates to: GHMDDHKALDVREVRAYKDSLLF*RPQPHG
Trigger: GCCGTGAGGCTGGGGCCGCAAGAAGAGAAGAGAATC...CTTGTAAGCCCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CAA 90 bp AAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGTGCCTTGGGCCACTTTaGGAGGGGGTGATGTCAAAC +
Preference number: 5 (lower is better)
Translates to: KNGQEEDRGQIHPSQSLMCLGPL*EGVMSN
Trigger: GTTTGACATCACCCCCTCCAAAAGTGGCCCAAGGCA...CATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp CTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAAGTGAGGACCACACCTCGGTCGTaGTTGCTGTTCACCATGGCA +
Preference number: 5 (lower is better)
Translates to: LGSGHMDDHKALDVREVRTTPRS*LLFTMA
Trigger: TGCCATGGTGAACAGCAACAACGACCGAGGTGTGGT...CCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CAA 90 bp ATGATCCATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGCCCTGCCACTGTCCTaGCACCACACCTCGGTCGTT +
Preference number: 5 (lower is better)
Translates to: MIHHLAVATWTITKPLMSALPLS*HHTSVV
Trigger: AACGACCGAGGTGTGGTGCAAGGACAGTGGCAGGGC...GGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGGATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CAA 90 bp GACGATCACAAAGCCCTTGATGTCCGGGAAGTGAGGGCTTACAAGGTCCACCTGCCGTACTTGACTGGCTaGTACCTGCCCTTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: DDHKALDVREVRAYKVHLPYLTG*YLPLSH
Trigger: GTGGCTCAAGGGCAGGTACAAGCCAGTCAAGTACGG...CAGGTGGACCTTGTAAGCCCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CAA 90 bp AAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGCTGGGCCCAGAACCTaGATGGTGATGAAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: KEWAGGGQGPNPPLSVPHAGPRT*MVMKSS
Trigger: AGAGGACTTCATCACCATCAAGGTTCTGGGCCCAGC...ATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000202625.7
CDS TCA 90 bp GATGATGCCGCTGTCGCTGAGCACGTACTCCTGTCTCTCCTCCTCTaGGGCCAGAAACACATCGTCCTCTGCACACCATGGGTTGAAAAG +
Preference number: 5 (lower is better)
Translates to: DDAAVAEHVLLSLLL*GQKHIVLCTPWVEK
Trigger: CTTTTCAACCCATGGTGTGCAGAGGACGATGTGTTTCTGGCCTCAGAGGAGGAGAGACAGGAGTACGTGCTCAGCGACAGCGGCATCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp GGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAAGTGAGGGCTTACAAGGTCTGGAACACAGCTTaGGTGTGGAGGGCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: GHMDDHKALDVREVRAYKVWNTA*VWRASE
Trigger: TTCTGAGGCCCTCCACACCAAAGCTGTGTTCCAGAC...CTTGTAAGCCCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CAA 90 bp ATGATCCATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCGGTGGCTGGGTTGTTTaGGTGACCGGGGCTTCGATC +
Preference number: 5 (lower is better)
Translates to: MIHHLAVATWTITKPLMSGGWVV*VTGASI
Trigger: GATCGAAGCCCCGGTCACCAAAACAACCCAGCCACC...GGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGGATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CAA 90 bp GAGGCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGTGTCGTGGGCTGAGTaGAAGTTGGACACGACCCGT +
Preference number: 5 (lower is better)
Translates to: EAGLTEASWLPCGRDKEWVSWAE*KLDTTR
Trigger: ACGGGTCGTGTCCAACTTCAACTCAGCCCACGACAC...CCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp CAAAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCACAATCTTCTTCGTGTTaGAGTATACACGCTCCCGGC +
Preference number: 5 (lower is better)
Translates to: QRMGRRRTGAKSTPLSPSQSSSC*SIHAPG
Trigger: GCCGGGAGCGTGTATACTCAAACACGAAGAAGATTG...TGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp AAGAATGGGCAGGAGGAGGACAGGGGCCAAATCCACCCCTCTCAGTCCCTCATGCAATCTTCTTCGTGTTaGAGTATACACGCTCCCGGC +
Preference number: 5 (lower is better)
Translates to: KNGQEEDRGQIHPSQSLMQSSSC*SIHAPG
Trigger: GCCGGGAGCGTGTATACTCAAACACGAAGAAGATTG...CATGAGGGACTGAGAGGGGTGGATTTGGCCCCTGTCCTCCTCCTGCCCATTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp GCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGGAGGCTCTAGCACCTaGAACTTGCCAGCGATGCTG +
Preference number: 5 (lower is better)
Translates to: AGLTEASWLPCGRDKEWAGGSST*NLPAML
Trigger: CAGCATCGCTGGCAAGTTCAAGGTGCTAGAGCCTCC...TGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp TTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGGAGGAGGAGGCTCTAGCACCTaGAACTTGCCAGCGATGCTG +
Preference number: 5 (lower is better)
Translates to: LTEASWLPCGRDKEWAGGGGSST*NLPAML
Trigger: CAGCATCGCTGGCAAGTTCAAGGTGCTAGAGCCTCC...TCCTCCTGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp GCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGTCTGGAACACAGCTTaGGTGTGGAGGGCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: AGLTEASWLPCGRDKEWAVWNTA*VWRASE
Trigger: TTCTGAGGCCCTCCACACCAAAGCTGTGTTCCAGAC...TGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp GCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAACACCTCGGTCGTTGTaGCTGTTCACCATGGCACTG +
Preference number: 5 (lower is better)
Translates to: AGLTEASWLPCGRDKEWATPRSL*LFTMAL
Trigger: CAGTGCCATGGTGAACAGCAACAACGACCGAGGTGT...TGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp ATGATCCATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCTGGGCTGAGTTGAAGTaGGACACGACCCGTGTGGCT +
Preference number: 5 (lower is better)
Translates to: MIHHLAVATWTITKPLMSWAELK*DTTRVA
Trigger: AGCCACACGGGTCGTGTCCAACTTCAACTCAGCCCA...GGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGGATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CAA 90 bp GCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCACTCATGATCCATCACTaGGCAGTGGCCACATGGACG +
Preference number: 5 (lower is better)
Translates to: AGLTEASWLPCGRDKEWALMIHH*AVATWT
Trigger: CGTCCATGTGGCCACTGCCAAGTGATGGATCATGAG...TGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp GAGGCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGCTCATGATCCATCACTaGGCAGTGGCCACATGGACG +
Preference number: 5 (lower is better)
Translates to: EAGLTEASWLPCGRDKEWLMIHH*AVATWT
Trigger: CGTCCATGTGGCCACTGCCAAGTGATGGATCATGAG...CCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS GCA 90 bp CACTCTCTCTATGAGGGGGTTGACTACTGTCACTTCCACTGTAACTaGCACTCCCACCATGGCTGGGCCCAGAACCTTGATGGTGATGAA +
Preference number: 5 (lower is better)
Translates to: HSLYEGVDYCHFHCN*HSHHGWAQNLDGDE
Trigger: TTCATCACCATCAAGGTTCTGGGCCCAGCCATGGTGGGAGTGGCAGTTACAGTGGAAGTGACAGTAGTCAACCCCCTCATAGAGAGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000202625.7
CDS-3UTR CAA 90 bp CAGTCCCTCATGATCCATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCAAGGAGTCCACGTATTaGTCCACACTCAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: QSLMIHHLAVATWTITKPKESTY*STLRFW
Trigger: CCAGAACCTGAGTGTGGACAAATACGTGGACTCCTT...GGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGGATCATGAGGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CAA 90 bp GGCCACATGGACGATCACAAAGCCCTTGATGTCCGGGAAGTGAGGGCTTACAAGGCCAACAGGATCTTCTaGTCCTCTGTCAGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: GHMDDHKALDVREVRAYKANRIF*SSVRSS
Trigger: AGAAGACCTGACAGAGGACAAGAAGATCCTGTTGGC...CTTGTAAGCCCTCACTTCCCGGACATCAAGGGCTTTGTGATCGTCCATGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CAA 90 bp ATGATCCATCACTTGGCAGTGGCCACATGGACGATCACAAAGCCCTTGATGTCCTGCCTTGGGCCACTTTaGGAGGGGGTGATGTCAAAC +
Preference number: 5 (lower is better)
Translates to: MIHHLAVATWTITKPLMSCLGPL*EGVMSN
Trigger: GTTTGACATCACCCCCTCCAAAAGTGGCCCAAGGCA...GGACATCAAGGGCTTTGTGATCGTCCATGTGGCCACTGCCAAGTGATGGATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS-3UTR CAA 90 bp TTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGGAGGAAAGGAGTCCACGTATTaGTCCACACTCAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: LTEASWLPCGRDKEWAGGKESTY*STLRFW
Trigger: CCAGAACCTGAGTGTGGACAAATACGTGGACTCCTT...TCCTCCTGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS-3UTR CAA 90 bp GCAGGATTAACTGAGGCCTCCTGGCTCCCATGTGGAAGAGACAAAGAATGGGCAGCCAACAGGATCTTCTaGTCCTCTGTCAGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: AGLTEASWLPCGRDKEWAANRIF*SSVRSS
Trigger: AGAAGACCTGACAGAGGACAAGAAGATCCTGTTGGC...TGCCCATTCTTTGTCTCTTCCACATGGGAGCCAGGAGGCCTCAGTTAATCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS GCA 72 bp CGCGCCAGTGCAGCGGGCTGGTGCCGCCGCCGTACTTaGCCTGCCACTGTCCTTGCACCACACCTCGGTCGT +
Preference number: 6 (lower is better)
Translates to: RASAAGWCRRRT*PATVLAPHLGR
Trigger: ACGACCGAGGTGTGGTGCAAGGACAGTGGCAGGGCAAGTACGGCGGCGGCACCAGCCCGCTGCACTGGCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000202625.7
ENST00000381423.1
ENST00000477505.1
CDS CAA 90 bp GCACCGCTCAGGTTGACCCTCACCCGCTGGGCCCGGGAGGTGAGGTaGGCCAAGCACAGGGCCAGTCTCAGGTCGTGGCCCAGCATGGGA +
Preference number: 6 (lower is better)
Translates to: APLRLTLTRWAREVR*AKHRASLRSWPSMG
Trigger: TCCCATGCTGGGCCACGACCTGAGACTGGCCCTGTGCTTGGCCAACCTCACCTCCCGGGCCCAGCGGGTGAGGGTCAACCTGAGCGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS CCA 72 bp CCCCTGCGAACCACCAGCTCAGGGCAGGGGTACTCCTaGGTGTGGTGGGCAGCGCCATTCCTCGACCGCTGC +
Preference number: 6 (lower is better)
Translates to: PLRTTSSGQGYS*VWWAAPFLDRC
Trigger: GCAGCGGTCGAGGAATGGCGCTGCCCACCACACCCAGGAGTACCCCTGCCCTGAGCTGGTGGTTCGCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000202625.7
ENST00000381423.1
ENST00000477505.1
CDS CCA 72 bp AGGATGGTGGCACCGCTCAGGTTGACCCTCACCCGCTaGGCCCGGGAGGTGAGGTTGGCCAAGCACAGGGCC +
Preference number: 6 (lower is better)
Translates to: RMVAPLRLTLTR*AREVRLAKHRA
Trigger: GGCCCTGTGCTTGGCCAACCTCACCTCCCGGGCCCAGCGGGTGAGGGTCAACCTGAGCGGTGCCACCATCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS CCA 72 bp ACCACCAGCTCAGGGCAGGGGTACTCCTGGGTGTGGTaGGCAGCGCCATTCCTCGACCGCTGCCAGTCCACC +
Preference number: 6 (lower is better)
Translates to: TTSSGQGYSWVW*AAPFLDRCQST
Trigger: GGTGGACTGGCAGCGGTCGAGGAATGGCGCTGCCCACCACACCCAGGAGTACCCCTGCCCTGAGCTGGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000202625.7
ENST00000381423.1
ENST00000477505.1
CDS GCA 72 bp CAGTGCAGCGGGCTGGTGCCGCCGCCGTACTTGCCCTaGCACTGTCCTTGCACCACACCTCGGTCGTTGTTG +
Preference number: 6 (lower is better)
Translates to: QCSGLVPPPYLP*HCPCTTPRSLL
Trigger: CAACAACGACCGAGGTGTGGTGCAAGGACAGTGGCAGGGCAAGTACGGCGGCGGCACCAGCCCGCTGCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000202625.7
ENST00000381423.1
ENST00000477505.1
CDS GCA 72 bp GGAGGTCGTCACGCCAGAGACAGCGACCCCCAGCCCTaGGGATCCAGATTCTCCTTCCAGAGGCTTCCACGC +
Preference number: 6 (lower is better)
Translates to: GGRHARDSDPQP*GSRFSFQRLPR
Trigger: GCGTGGAAGCCTCTGGAAGGAGAATCTGGATCCGCAGGGCTGGGGGTCGCTGTCTCTGGCGTGACGACCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS CAA 90 bp GTCCAGCCCTCACCCCGCTCCAGCTCCGATGTCTGGAACACAGCTTaGGTGTGGAGGGCCTCAGAAGCCCGGGGTCCTGTCTCCATCGTG +
Preference number: 6 (lower is better)
Translates to: VQPSPRSSSDVWNTA*VWRASEARGPVSIV
Trigger: CACGATGGAGACAGGACCCCGGGCTTCTGAGGCCCTCCACACCAAAGCTGTGTTCCAGACATCGGAGCTGGAGCGGGGTGAGGGCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS CAA 90 bp AGGGCCAGTCTCAGGTCGTGGCCCAGCATGGGAGGCTCTAGCACCTaGAACTTGCCAGCGATGCTGGGCTTGGTGGCAGGCTCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: RASLRSWPSMGGSST*NLPAMLGLVAGSRR
Trigger: CCTCCTGGAGCCTGCCACCAAGCCCAGCATCGCTGGCAAGTTCAAGGTGCTAGAGCCTCCCATGCTGGGCCACGACCTGAGACTGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS GCA 72 bp TCCTGGGTGTGGTGGGCAGCGCCATTCCTCGACCGCTaGCAGTCCACCTTGGTGACTCTGATCCCTGCCATG +
Preference number: 6 (lower is better)
Translates to: SWVWWAAPFLDR*QSTLVTLIPAM
Trigger: CATGGCAGGGATCAGAGTCACCAAGGTGGACTGGCAGCGGTCGAGGAATGGCGCTGCCCACCACACCCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS CCA 72 bp CACCCCGCTCCAGCTCCGATGTCTGGAACACAGCTTTaGTGTGGAGGGCCTCAGAAGCCCGGGGTCCTGTCT +
Preference number: 6 (lower is better)
Translates to: HPAPAPMSGTQL*CGGPQKPGVLS
Trigger: AGACAGGACCCCGGGCTTCTGAGGCCCTCCACACCAAAGCTGTGTTCCAGACATCGGAGCTGGAGCGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS CCA 72 bp GCTGTCCAGCCCTCACCCCGCTCCAGCTCCGATGTCTaGAACACAGCTTTGGTGTGGAGGGCCTCAGAAGCC +
Preference number: 6 (lower is better)
Translates to: AVQPSPRSSSDV*NTALVWRASEA
Trigger: GGCTTCTGAGGCCCTCCACACCAAAGCTGTGTTCCAGACATCGGAGCTGGAGCGGGGTGAGGGCTGGACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS CAA 72 bp TCACCCCGCTCCAGCTCCGATGTCTGGAACACAGCTTaGGTGTGGAGGGCCTCAGAAGCCCGGGGTCCTGTC +
Preference number: 6 (lower is better)
Translates to: SPRSSSDVWNTA*VWRASEARGPV
Trigger: GACAGGACCCCGGGCTTCTGAGGCCCTCCACACCAAAGCTGTGTTCCAGACATCGGAGCTGGAGCGGGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS CAA 72 bp TCGTGGCCCAGCATGGGAGGCTCTAGCACCTTGAACTaGCCAGCGATGCTGGGCTTGGTGGCAGGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SWPSMGGSSTLN*PAMLGLVAGSR
Trigger: CCTGGAGCCTGCCACCAAGCCCAGCATCGCTGGCAAGTTCAAGGTGCTAGAGCCTCCCATGCTGGGCCACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS CAA 72 bp CTCAGGTCGTGGCCCAGCATGGGAGGCTCTAGCACCTaGAACTTGCCAGCGATGCTGGGCTTGGTGGCAGGC +
Preference number: 6 (lower is better)
Translates to: LRSWPSMGGSST*NLPAMLGLVAG
Trigger: GCCTGCCACCAAGCCCAGCATCGCTGGCAAGTTCAAGGTGCTAGAGCCTCCCATGCTGGGCCACGACCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS CAA 90 bp AGCATGGGAGGCTCTAGCACCTTGAACTTGCCAGCGATGCTGGGCTaGGTGGCAGGCTCCAGGAGGTCGTCACGCCAGAGACAGCGACCC +
Preference number: 6 (lower is better)
Translates to: SMGGSSTLNLPAMLG*VAGSRRSSRQRQRP
Trigger: GGGTCGCTGTCTCTGGCGTGACGACCTCCTGGAGCCTGCCACCAAGCCCAGCATCGCTGGCAAGTTCAAGGTGCTAGAGCCTCCCATGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS CAA 90 bp AGTCTCAGGTCGTGGCCCAGCATGGGAGGCTCTAGCACCTTGAACTaGCCAGCGATGCTGGGCTTGGTGGCAGGCTCCAGGAGGTCGTCA +
Preference number: 6 (lower is better)
Translates to: SLRSWPSMGGSSTLN*PAMLGLVAGSRRSS
Trigger: TGACGACCTCCTGGAGCCTGCCACCAAGCCCAGCATCGCTGGCAAGTTCAAGGTGCTAGAGCCTCCCATGCTGGGCCACGACCTGAGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS GCA 72 bp TACTTGACTGGCTTGTACCTGCCCTTGAGCCACTTCTaGAGAATGGCCACGCTGCCGCGCCAGTGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: YLTGLYLPLSHF*RMATLPRQCSG
Trigger: CCCGCTGCACTGGCGCGGCAGCGTGGCCATTCTGCAGAAGTGGCTCAAGGGCAGGTACAAGCCAGTCAAGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000202625.7
ENST00000381423.1
ENST00000477505.1
CDS GCA 72 bp CAGAGGCTTCCACGCCGAACAGCCTGTTCACCGCCTTaGTGTACACCTGCCTCTCTTTCCGGGACCCTTCCG +
Preference number: 6 (lower is better)
Translates to: QRLPRRTACSPP*CTPASLSGTLP
Trigger: CGGAAGGGTCCCGGAAAGAGAGGCAGGTGTACAGCAAGGCGGTGAACAGGCTGTTCGGCGTGGAAGCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS GCA 72 bp CCCCAGCCTCACGGCGTGGGATTCATGCAGGATCTCTaGCACTGGCTTGCGGGTATAGAGGATGGTGGCACC +
Preference number: 6 (lower is better)
Translates to: PQPHGVGFMQDL*HWLAGIEDGGT
Trigger: GGTGCCACCATCCTCTATACCCGCAAGCCAGTGGCAGAGATCCTGCATGAATCCCACGCCGTGAGGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS CAA 72 bp CAGCACTGGCCGTACTTGACTGGCTTGTACCTGCCCTaGAGCCACTTCTGCAGAATGGCCACGCTGCCGCGC +
Preference number: 6 (lower is better)
Translates to: QHWPYLTGLYLP*SHFCRMATLPR
Trigger: GCGCGGCAGCGTGGCCATTCTGCAGAAGTGGCTCAAGGGCAGGTACAAGCCAGTCAAGTACGGCCAGTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000202625.7
ENST00000381423.1
ENST00000477505.1
CDS CAA 72 bp CCAGAGGCTTCCACGCCGAACAGCCTGTTCACCGCCTaGCTGTACACCTGCCTCTCTTTCCGGGACCCTTCC +
Preference number: 6 (lower is better)
Translates to: PEASTPNSLFTA*LYTCLSFRDPS
Trigger: GGAAGGGTCCCGGAAAGAGAGGCAGGTGTACAGCAAGGCGGTGAACAGGCTGTTCGGCGTGGAAGCCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS TCA 72 bp GAGGGGGTGATGTCAAACTGGACTGAGGCCCTCTCCTaGGGCTCCAGGGTAGGCACGTCGATGCTGAGCTGT +
Preference number: 6 (lower is better)
Translates to: EGVMSNWTEALS*GSRVGTSMLSC
Trigger: ACAGCTCAGCATCGACGTGCCTACCCTGGAGCCTCAGGAGAGGGCCTCAGTCCAGTTTGACATCACCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000202625.7
CDS TCA 72 bp CCACCTGCAGCTGCCTTGGGCCACTTTTGGAGGGGGTaGTGTCAAACTGGACTGAGGCCCTCTCCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: PPAAALGHFWRG*CQTGLRPSPEA
Trigger: AGCCTCAGGAGAGGGCCTCAGTCCAGTTTGACATCACCCCCTCCAAAAGTGGCCCAAGGCAGCTGCAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS CCA 72 bp GTGAGGTTGGCCAAGCACAGGGCCAGTCTCAGGTCGTaGCCCAGCATGGGAGGCTCTAGCACCTTGAACTTG +
Preference number: 6 (lower is better)
Translates to: VRLAKHRASLRS*PSMGGSSTLNL
Trigger: CAAGTTCAAGGTGCTAGAGCCTCCCATGCTGGGCCACGACCTGAGACTGGCCCTGTGCTTGGCCAACCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS CAA 90 bp GTAGATGGGGTTGTGGCGGCAGGACACGTCGGTGGCTGGGTTGTTTaGGTGACCGGGGCTTCGATCCAGGATGGAGAGGCAGATGTTCAG +
Preference number: 6 (lower is better)
Translates to: VDGVVAAGHVGGWVV*VTGASIQDGEADVQ
Trigger: CTGAACATCTGCCTCTCCATCCTGGATCGAAGCCCCGGTCACCAAAACAACCCAGCCACCGACGTGTCCTGCCGCCACAACCCCATCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000202625.7
ENST00000381423.1
ENST00000477505.1
CDS CAA 72 bp AGGTCCTCCAGGGTCCGCCCGAAGGAGTCCACGTATTaGTCCACACTCAGGTTCTGGTCTGTGTCGTGGGCT +
Preference number: 6 (lower is better)
Translates to: RSSRVRPKESTY*STLRFWSVSWA
Trigger: AGCCCACGACACAGACCAGAACCTGAGTGTGGACAAATACGTGGACTCCTTCGGGCGGACCCTGGAGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000202625.7
ENST00000381423.1
ENST00000477505.1
CDS CAA 90 bp ATTCTCCTTCCAGAGGCTTCCACGCCGAACAGCCTGTTCACCGCCTaGCTGTACACCTGCCTCTCTTTCCGGGACCCTTCCGGATACTTG +
Preference number: 6 (lower is better)
Translates to: ILLPEASTPNSLFTA*LYTCLSFRDPSGYL
Trigger: CAAGTATCCGGAAGGGTCCCGGAAAGAGAGGCAGGTGTACAGCAAGGCGGTGAACAGGCTGTTCGGCGTGGAAGCCTCTGGAAGGAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS TCA 72 bp GCTGTCGCTGAGCACGTACTCCTGTCTCTCCTCCTCTaGGGCCAGAAACACATCGTCCTCTGCACACCATGG +
Preference number: 6 (lower is better)
Translates to: AVAEHVLLSLLL*GQKHIVLCTPW
Trigger: CCATGGTGTGCAGAGGACGATGTGTTTCTGGCCTCAGAGGAGGAGAGACAGGAGTACGTGCTCAGCGACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS TCA 72 bp GAGGGGGTGATGTCAAACTGGACTGAGGCCCTCTCCTaGGGCTCCAGGGTAGGCACGCTTGATGGTGATGAA +
Preference number: 6 (lower is better)
Translates to: EGVMSNWTEALS*GSRVGTLDGDE
Trigger: TTCATCACCATCAAGCGTGCCTACCCTGGAGCCTCAGGAGAGGGCCTCAGTCCAGTTTGACATCACCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381423.1
CDS CCA 72 bp CTTGGTGACTCTGATCCCTGCCATGTGAAGGCCAGCTaGACTCCTCTGTTCCTCCACACAGCAGTGTGTGCA +
Preference number: 6 (lower is better)
Translates to: LGDSDPCHVKAS*TPLFLHTAVCA
Trigger: TGCACACACTGCTGTGTGGAGGAACAGAGGAGTCCAGCTGGCCTTCACATGGCAGGGATCAGAGTCACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS CCA 72 bp GAAGTGAGGGCTTACAAGGTCCACCTGCAGCTGCCTTaGGCCACTTTTGGAGGGGGTGATGTCAAACTGGAC +
Preference number: 6 (lower is better)
Translates to: EVRAYKVHLQLP*ATFGGGDVKLD
Trigger: GTCCAGTTTGACATCACCCCCTCCAAAAGTGGCCCAAGGCAGCTGCAGGTGGACCTTGTAAGCCCTCACTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS TCA 72 bp AGGCCAGAAACACATCGTCCTCTGCACACCATGGGTTaGAAAGGAGAACAAACTCGCCCAGCCTCCGGTTGC +
Preference number: 6 (lower is better)
Translates to: RPETHRPLHTMG*KGEQTRPASGC
Trigger: GCAACCGGAGGCTGGGCGAGTTTGTTCTCCTTTTCAACCCATGGTGTGCAGAGGACGATGTGTTTCTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202625.7
ENST00000381423.1
CDS CAA 72 bp ATCAGCGCACAGTCCTTCACTCTCTCTATGAGGGGGTaGACTACTGTCACTTCCACTGTAACTGCCACTCCC +
Preference number: 6 (lower is better)
Translates to: ISAQSFTLSMRG*TTVTSTVTATP
Trigger: GGGAGTGGCAGTTACAGTGGAAGTGACAGTAGTCAACCCCCTCATAGAGAGAGTGAAGGACTGTGCGCTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000202625.7