RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TGFBR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000163513

Ensembl transcript IDs: ENST00000295754.10, ENST00000359013.4, ENST00000672050.1, ENST00000672866.1, ENST00000673203.1, ENST00000673250.1

Found 432 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACAATGTCAAAGGCATAGAATGCTCTATGTCACCCACTCCCTGCTaGTGTTGTTTCTGCTTATCCCCACAGCTTACAGGGAGGGGAGTG +
Preference number: 1 (lower is better)
Translates to: DNVKGIECSMSPTPC*CCFCLSPQLTGRGV
Trigger: CACTCCCCTCCCTGTAAGCTGTGGGGATAAGCAGAAACAACAGCAGCAGGGAGTGGGTGACATAGAGCATTCTATGCCTTTGACATTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR GCA 90 bp ACCACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATaGCCTACGGTGCAAGTGGAATTTCTAGGCGCCTCTATGCTACTG +
Preference number: 1 (lower is better)
Translates to: TTRGQWATAIGMVSA*PTVQVEFLGASMLL
Trigger: CAGTAGCATAGAGGCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR GCA 90 bp TATGACAATGTCAAAGGCATAGAATGCTCTATGTCACCCACTCCCTaGTGCTGTTGTTTCTGCTTATCCCCACAGCTTACAGGGAGGGGA +
Preference number: 1 (lower is better)
Translates to: YDNVKGIECSMSPTP*CCCFCLSPQLTGRG
Trigger: TCCCCTCCCTGTAAGCTGTGGGGATAAGCAGAAACAACAGCAGCAGGGAGTGGGTGACATAGAGCATTCTATGCCTTTGACATTGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR CCA 90 bp AAGGCTGGCATGATGGAGAGAACGGTAACCATGAGGAAAGCTTCTTaGAGTAAAGCACTCCTCTCTCCAATGCAGAGGGTAAAACTATTA +
Preference number: 1 (lower is better)
Translates to: KAGMMERTVTMRKAS*SKALLSPMQRVKLL
Trigger: TAATAGTTTTACCCTCTGCATTGGAGAGAGGAGTGCTTTACTCCAAGAAGCTTTCCTCATGGTTACCGTTCTCTCCATCATGCCAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR TCA 90 bp AGAGTGCCTGAGGTCATAGTCCTGACAATGATAGTATTGTGTAGTTaGAATCCTCTTCATCAGGCCAAACTGTGCTTGAGCAATCAGGAG +
Preference number: 1 (lower is better)
Translates to: RVPEVIVLTMIVLCS*NPLHQAKLCLSNQE
Trigger: CTCCTGATTGCTCAAGCACAGTTTGGCCTGATGAAGAGGATTTCAACTACACAATACTATCATTGTCAGGACTATGACCTCAGGCACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR TCA 90 bp TTTGTGTCCCACATTCAAATCCTCTCTAGTAATTTCTGCAAAGGTTaGGAAGGCTGGCATGATGGAGAGAACGGTAACCATGAGGAAAGC +
Preference number: 1 (lower is better)
Translates to: FVSHIQILSSNFCKG*EGWHDGENGNHEES
Trigger: GCTTTCCTCATGGTTACCGTTCTCTCCATCATGCCAGCCTTCTCAACCTTTGCAGAAATTACTAGAGAGGATTTGAATGTGGGACACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR GCA 90 bp CTCTTTCCTCATGCAAAGTTCACTGTTTTACAGTCAGAGAACCACTaGATGTGTGATTGTCAAATGCTAATGCTGTCATGGGTCCCTTCC +
Preference number: 1 (lower is better)
Translates to: LFPHAKFTVLQSENH*MCDCQMLMLSWVPS
Trigger: GGAAGGGACCCATGACAGCATTAGCATTTGACAATCACACATGCAGTGGTTCTCTGACTGTAAAACAGTGAACTTTGCATGAGGAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR TCA 90 bp AAATCAATCTCATTTCCTGAGGAAGTGCTAACACAGCTTATCCTATaGCAATGTCAAAGGCATAGAATGCTCTATGTCACCCACTCCCTG +
Preference number: 1 (lower is better)
Translates to: KSISFPEEVLTQLIL*QCQRHRMLYVTHSL
Trigger: CAGGGAGTGGGTGACATAGAGCATTCTATGCCTTTGACATTGTCATAGGATAAGCTGTGTTAGCACTTCCTCAGGAAATGAGATTGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR CCA 90 bp CAAACTGTGCTTGAGCAATCAGGAGCCCAGAAAGATGGAACCCATTaGTGTTTGTATAGAAAACTAGAAAATCAAGTCAAGTGTAATGAA +
Preference number: 1 (lower is better)
Translates to: QTVLEQSGAQKDGTH*CLYRKLENQVKCNE
Trigger: TTCATTACACTTGACTTGATTTTCTAGTTTTCTATACAAACACCAATGGGTTCCATCTTTCTGGGCTCCTGATTGCTCAAGCACAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR TCA 90 bp GATAAGGTAGTCAAAATCATATTATATACCCAGAGAATGACTGCTTaGATGGACATTTCTTACAAGGGACCTTGGTTAGGTGCAGATTTA +
Preference number: 1 (lower is better)
Translates to: DKVVKIILYTQRMTA*MDISYKGPWLGADL
Trigger: TAAATCTGCACCTAACCAAGGTCCCTTGTAAGAAATGTCCATTCAAGCAGTCATTCTCTGGGTATATAATATGATTTTGACTACCTTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGCAGCCTCTTTGGACATaGCCCAGCCTGCCCCAGAAG +
Preference number: 2 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVQPLWT*PSLPQK
Trigger: CTTCTGGGGCAGGCTGGGCCATGTCCAAAGAGGCTG...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCGAGGGGCAGCCTCTTTaGACATGGCCCAGCCTGCCC +
Preference number: 2 (lower is better)
Translates to: SYWDGISMPYGASGISRREGQPL*TWPSLP
Trigger: GGGCAGGCTGGGCCATGTCCAAAGAGGCTGCCCCTC...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR GCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGTCAGGGGCAGCTTCCTaGTGCCTCTGTTCTTTGGTG +
Preference number: 2 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVSGAAS*CLCSLV
Trigger: CACCAAAGAACAGAGGCAGCAGGAAGCTGCCCCTGA...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTGAGGGGCAGCCTCTTTaGACATGGCCCAGCCTGCCC +
Preference number: 2 (lower is better)
Translates to: GNSYWDGISMPYGASGISEGQPL*TWPSLP
Trigger: GGGCAGGCTGGGCCATGTCCAAAGAGGCTGCCCCTC...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR TCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGTCAGCCCACCCACACTaGGGAGGGTGCCTAGAGGTT +
Preference number: 2 (lower is better)
Translates to: TRGQWATAIGMVSACPTVSAHPH*GGCLEV
Trigger: AACCTCTAGGCACCCTCCTCAGTGTGGGTGGGCTGA...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR CAA 90 bp TGTCAAAGGCATAGAATGCTCTATGTCACCCACTCCCTGCTGCTGTaGTTTCTGCTTATCCCCACAGCTTACAGGGAGGGGAGTGACCCC +
Preference number: 2 (lower is better)
Translates to: CQRHRMLYVTHSLLL*FLLIPTAYREGSDP
Trigger: GGGGTCACTCCCCTCCCTGTAAGCTGTGGGGATAAGCAGAAACAACAGCAGCAGGGAGTGGGTGACATAGAGCATTCTATGCCTTTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR GCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGTCAGGGGCAGCTTCCTaGTGCCTCTGTTCTTTGGTG +
Preference number: 2 (lower is better)
Translates to: TRGQWATAIGMVSACPTVSGAAS*CLCSLV
Trigger: CACCAAAGAACAGAGGCAGCAGGAAGCTGCCCCTGA...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGCAGCCTCTTTGGACATaGCCCAGCCTGCCCCAGAAG +
Preference number: 2 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRQPLWT*PSLPQK
Trigger: CTTCTGGGGCAGGCTGGGCCATGTCCAAAGAGGCTG...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGTTCATTAGTAGATGGTaGGGCAATCGCATGGATGGG +
Preference number: 2 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVFISRW*GNRMDG
Trigger: CCCATCCATGCGATTGCCCCACCATCTACTAATGAA...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR TCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGGTTTACAGTGAGAAGTaGGGCAGCTTTGTAAGTGTC +
Preference number: 2 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVVYSEK*GSFVSV
Trigger: GACACTTACAAAGCTGCCTCACTTCTCACTGTAAAC...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR GCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTGGGGCAGCTTCCTGCTaGCTCTGTTCTTTGGTGAGA +
Preference number: 2 (lower is better)
Translates to: GNSYWDGISMPYGASGISGAASC*LCSLVR
Trigger: TCTCACCAAAGAACAGAGGCAGCAGGAAGCTGCCCC...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR GCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCCATCAGGCCAAACTGTaGTTGAGCAATCAGGAGCCC +
Preference number: 2 (lower is better)
Translates to: SYWDGISMPYGASGISRRHQAKL*LSNQEP
Trigger: GGGCTCCTGATTGCTCAAGCACAGTTTGGCCTGATG...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGGCTGGCTGTGAGACATaGAGCCTCTTTCCTCATGCA +
Preference number: 2 (lower is better)
Translates to: TRGQWATAIGMVSACPTVAGCET*SLFPHA
Trigger: TGCATGAGGAAAGAGGCTCCATGTCTCACAGCCAGC...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGGGTCCAGGTAGGCAGTaGAAAGAGCTAATGTTTACA +
Preference number: 2 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVGPGRQ*KELMFT
Trigger: TGTAAACATTAGCTCTTTCCACTGCCTACCTGGACC...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR TCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGATCAATCTCATTTCCTaGGGAAGTGCTAACACAGCT +
Preference number: 2 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVINLIS*GSANTA
Trigger: AGCTGTGTTAGCACTTCCTCAGGAAATGAGATTGAT...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR TCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGGAACCACTGCATGTGTaGTTGTCAAATGCTAATGCT +
Preference number: 2 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVEPLHV*LSNANA
Trigger: AGCATTAGCATTTGACAATCACACATGCAGTGGTTC...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR TCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGGGTCATAGCTGGCTGTaGGACATGGAGCCTCTTTCC +
Preference number: 2 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRGHSWL*DMEPLS
Trigger: GGAAAGAGGCTCCATGTCTCACAGCCAGCTATGACC...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR GCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGGGGGCAGCTTCCTGCTaGCTCTGTTCTTTGGTGAGA +
Preference number: 2 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRGAASC*LCSLVR
Trigger: TCTCACCAAAGAACAGAGGCAGCAGGAAGCTGCCCC...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGGAACCCCGGGAACACTaGTCCTCAAACAGTGCCACT +
Preference number: 2 (lower is better)
Translates to: SYKGPWLGADLIPRLGSREPREH*SSNSAT
Trigger: AGTGGCACTGTTTGAGGACCAGTGTTCCCGGGGTTC...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR TCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGAGGCCAAACTGTGCTTaGGCAATCAGGAGCCCAGAA +
Preference number: 2 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRRPNCA*AIRSPE
Trigger: TTCTGGGCTCCTGATTGCTCAAGCACAGTTTGGCCT...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR GCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGATGTCACCCACTCCCTaGTGCTGTTGTTTCTGCTTA +
Preference number: 2 (lower is better)
Translates to: TRGQWATAIGMVSACPTVMSPTP*CCCFCL
Trigger: TAAGCAGAAACAACAGCAGCAGGGAGTGGGTGACAT...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR GCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGGAGCCTCTTTCCTCATaGAAAGTTCACTGTTTTACA +
Preference number: 2 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVEPLSS*KVHCFT
Trigger: TGTAAAACAGTGAACTTTGCATGAGGAAAGAGGCTC...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR TCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCAGTGGCTTCACTTTTTaGAACGCTGTGCTGACCAAA +
Preference number: 2 (lower is better)
Translates to: SYWDGISMPYGASGISRRSGFTF*NAVLTK
Trigger: TTTGGTCAGCACAGCGTTTCAAAAAGTGAAGCCACT...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR TCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGAATTTCTGCAAAGGTTaGGAAGGCTGGCATGATGGA +
Preference number: 2 (lower is better)
Translates to: TRGQWATAIGMVSACPTVNFCKG*EGWHDG
Trigger: TCCATCATGCCAGCCTTCTCAACCTTTGCAGAAATT...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR GCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGTCACCCACTCCCTGCTaGTGTTGTTTCTGCTTATCC +
Preference number: 2 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRSPTPC*CCFCLS
Trigger: GGATAAGCAGAAACAACAGCAGCAGGGAGTGGGTGA...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR GCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTGTCAAAGGCATAGAATaGTCTATGTCACCCACTCCC +
Preference number: 2 (lower is better)
Translates to: GNSYWDGISMPYGASGISVKGIE*SMSPTP
Trigger: GGGAGTGGGTGACATAGAGCATTCTATGCCTTTGAC...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR GCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGTACCCAGAGAATGACTaGTTGAATGGACATTTCTTA +
Preference number: 2 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVYPEND*LNGHFL
Trigger: TAAGAAATGTCCATTCAAGCAGTCATTCTCTGGGTA...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCCCTTCCTTCTCTGCTTaGTTCTGGAGTTCTCCAATA +
Preference number: 2 (lower is better)
Translates to: SYWDGISMPYGASGISRRPSFSA*FWSSPI
Trigger: TATTGGAGAACTCCAGAACCAAGCAGAGAAGGAAGG...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTTTCATTAGTAGATGGTaGGGCAATCGCATGGATGGG +
Preference number: 2 (lower is better)
Translates to: GNSYWDGISMPYGASGISFISRW*GNRMDG
Trigger: CCCATCCATGCGATTGCCCCACCATCTACTAATGAA...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGTCTTACAAGGGACCTTaGTTAGGTGCAGATTTAATT +
Preference number: 2 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVSYKGP*LGADLI
Trigger: AATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR TCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCGTGCTAGGCAGGGAATaGTTATTTTGCAAAAGCAAG +
Preference number: 2 (lower is better)
Translates to: SYWDGISMPYGASGISRRVLGRE*LFCKSK
Trigger: CTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCAC...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR TCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGTGGACTGGAGATAACTaGAAACCATCTGCTATCCTT +
Preference number: 2 (lower is better)
Translates to: TRGQWATAIGMVSACPTVWTGDN*KPSAIL
Trigger: AAGGATAGCAGATGGTTTTCAGTTATCTCCAGTCCA...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR TCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTCACCTTCACATTTTGTaGACGTGGACTGGAGATAAC +
Preference number: 2 (lower is better)
Translates to: GNSYWDGISMPYGASGISHLHIL*TWTGDN
Trigger: GTTATCTCCAGTCCACGTTCACAAAATGTGAAGGTG...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR TCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTGTTTACAGTGAGAAGTaGGGCAGCTTTGTAAGTGTC +
Preference number: 2 (lower is better)
Translates to: GNSYWDGISMPYGASGISVYSEK*GSFVSV
Trigger: GACACTTACAAAGCTGCCTCACTTCTCACTGTAAAC...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR GCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGATGTCACCCACTCCCTaGTGCTGTTGTTTCTGCTTA +
Preference number: 2 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRMSPTP*CCCFCL
Trigger: TAAGCAGAAACAACAGCAGCAGGGAGTGGGTGACAT...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR GCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGGTCAAAGGCATAGAATaGTCTATGTCACCCACTCCC +
Preference number: 2 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRVKGIE*SMSPTP
Trigger: GGGAGTGGGTGACATAGAGCATTCTATGCCTTTGAC...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCGAAAAGGATGAAGGCTaGGAGCAGAGAATAGTAACA +
Preference number: 2 (lower is better)
Translates to: SYWDGISMPYGASGISRREKDEG*EQRIVT
Trigger: TGTTACTATTCTCTGCTCCCAGCCTTCATCCTTTTC...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGAGCCCAGAAAGATaGAACCCATTGGTGTTTGTA +
Preference number: 2 (lower is better)
Translates to: GNSYWDGISMPYGASGISRSPER*NPLVFV
Trigger: TACAAACACCAATGGGTTCCATCTTTCTGGGCTCCT...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTGGTCCAGGTAGGCAGTaGAAAGAGCTAATGTTTACA +
Preference number: 2 (lower is better)
Translates to: GNSYWDGISMPYGASGISGPGRQ*KELMFT
Trigger: TGTAAACATTAGCTCTTTCCACTGCCTACCTGGACC...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR TCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGACACAGCTTATCCTATaGCAATGTCAAAGGCATAGA +
Preference number: 2 (lower is better)
Translates to: TRGQWATAIGMVSACPTVTQLIL*QCQRHR
Trigger: TCTATGCCTTTGACATTGTCATAGGATAAGCTGTGT...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR TCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTGGTCATAGCTGGCTGTaGGACATGGAGCCTCTTTCC +
Preference number: 2 (lower is better)
Translates to: QKRSARQGMIILQKQVQCGHSWL*DMEPLS
Trigger: GGAAAGAGGCTCCATGTCTCACAGCCAGCTATGACC...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR TCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTGTGCTAGGCAGGGAATaGTTATTTTGCAAAAGCAAG +
Preference number: 2 (lower is better)
Translates to: GNSYWDGISMPYGASGISVLGRE*LFCKSK
Trigger: CTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCAC...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR TCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAGAGAATGACTGCTTaGATGGACATTTCTTACAAG +
Preference number: 2 (lower is better)
Translates to: TRGQWATAIGMVSACPTVQRMTA*MDISYK
Trigger: CTTGTAAGAAATGTCCATTCAAGCAGTCATTCTCTG...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR GCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTCAGTCAGAGAACCACTaGATGTGTGATTGTCAAATG +
Preference number: 2 (lower is better)
Translates to: GNSYWDGISMPYGASGISQSENH*MCDCQM
Trigger: CATTTGACAATCACACATGCAGTGGTTCTCTGACTG...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR GCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTTTTTGCAAAAGCAAGTaGAATGTGGTCATAGCTGGC +
Preference number: 2 (lower is better)
Translates to: GNSYWDGISMPYGASGISFCKSK*NVVIAG
Trigger: GCCAGCTATGACCACATTGCACTTGCTTTTGCAAAA...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGTTCTCTGCTTGGTTCTaGAGTTCTCCAATAAAACCA +
Preference number: 2 (lower is better)
Translates to: TRGQWATAIGMVSACPTVFSAWF*SSPIKP
Trigger: TGGTTTTATTGGAGAACTCCAGAACCAAGCAGAGAA...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGTTTTTCATTAGTAGATaGTGGGGCAATCGCATGGAT +
Preference number: 2 (lower is better)
Translates to: TRGQWATAIGMVSACPTVFFISR*WGNRMD
Trigger: ATCCATGCGATTGCCCCACCATCTACTAATGAAAAA...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTGAAAAGGATGAAGGCTaGGAGCAGAGAATAGTAACA +
Preference number: 2 (lower is better)
Translates to: GNSYWDGISMPYGASGISEKDEG*EQRIVT
Trigger: TGTTACTATTCTCTGCTCCCAGCCTTCATCCTTTTC...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGTTTTCTAACTGCAAATaGGACCTTTGTGTCCCACAT +
Preference number: 2 (lower is better)
Translates to: TRGQWATAIGMVSACPTVFSNCK*DLCVPH
Trigger: ATGTGGGACACAAAGGTCCCATTTGCAGTTAGAAAA...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR TCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTACACAGCTTATCCTATaGCAATGTCAAAGGCATAGA +
Preference number: 2 (lower is better)
Translates to: GNSYWDGISMPYGASGISTQLIL*QCQRHR
Trigger: TCTATGCCTTTGACATTGTCATAGGATAAGCTGTGT...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR TCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGATCAATCTCATTTCCTaGGGAAGTGCTAACACAGCT +
Preference number: 2 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRINLIS*GSANTA
Trigger: AGCTGTGTTAGCACTTCCTCAGGAAATGAGATTGAT...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR TCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGTATATACCCAGAGAATaGCTGCTTGAATGGACATTT +
Preference number: 2 (lower is better)
Translates to: TRGQWATAIGMVSACPTVYIPRE*LLEWTF
Trigger: AAATGTCCATTCAAGCAGTCATTCTCTGGGTATATA...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR GCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGCAGTCAGAGAACCACTaGATGTGTGATTGTCAAATG +
Preference number: 2 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRQSENH*MCDCQM
Trigger: CATTTGACAATCACACATGCAGTGGTTCTCTGACTG...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR GCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGTACCCAGAGAATGACTaGTTGAATGGACATTTCTTA +
Preference number: 2 (lower is better)
Translates to: TRGQWATAIGMVSACPTVYPEND*LNGHFL
Trigger: TAAGAAATGTCCATTCAAGCAGTCATTCTCTGGGTA...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR GCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCCACAAATTTTCTAACTaGAAATGGGACCTTTGTGTC +
Preference number: 2 (lower is better)
Translates to: SYWDGISMPYGASGISRRHKFSN*KWDLCV
Trigger: GACACAAAGGTCCCATTTGCAGTTAGAAAATTTGTG...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTGCTGGCTGTGAGACATaGAGCCTCTTTCCTCATGCA +
Preference number: 2 (lower is better)
Translates to: QKRSARQGMIILQKQVQCAGCET*SLFPHA
Trigger: TGCATGAGGAAAGAGGCTCCATGTCTCACAGCCAGC...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTTTTTCTAACTGCAAATaGGACCTTTGTGTCCCACAT +
Preference number: 2 (lower is better)
Translates to: GNSYWDGISMPYGASGISFSNCK*DLCVPH
Trigger: ATGTGGGACACAAAGGTCCCATTTGCAGTTAGAAAA...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR TCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGATAGTATTGTGTAGTTaGAATCCTCTTCATCAGGCC +
Preference number: 2 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRIVLCS*NPLHQA
Trigger: GGCCTGATGAAGAGGATTTCAACTACACAATACTAT...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR GCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGGAGCCTCTTTCCTCATaGAAAGTTCACTGTTTTACA +
Preference number: 2 (lower is better)
Translates to: SYKGPWLGADLIPRLGSREPLSS*KVHCFT
Trigger: TGTAAAACAGTGAACTTTGCATGAGGAAAGAGGCTC...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTTCTTACAAGGGACCTTaGTTAGGTGCAGATTTAATT +
Preference number: 2 (lower is better)
Translates to: GNSYWDGISMPYGASGISSYKGP*LGADLI
Trigger: AATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTCCTTCCTTCTCTGCTTaGTTCTGGAGTTCTCCAATA +
Preference number: 2 (lower is better)
Translates to: QKRSARQGMIILQKQVQCPSFSA*FWSSPI
Trigger: TATTGGAGAACTCCAGAACCAAGCAGAGAAGGAAGG...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CAA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTTGCTGCCTCTGTTCTTaGGTGAGAGGGGCAGCCTCT +
Preference number: 3 (lower is better)
Translates to: GNSYWDGISMPYGASGISCCLCS*VRGAAS
Trigger: AGAGGCTGCCCCTCTCACCAAAGAACAGAGGCAGCA...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR GCA 72 bp GGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATaGCCTACGGTGCAAGTGGAATTTCTAGGCGCCTCT +
Preference number: 3 (lower is better)
Translates to: GQWATAIGMVSA*PTVQVEFLGAS
Trigger: AGAGGCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CAA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGTGCTGCCTCTGTTCTTaGGTGAGAGGGGCAGCCTCT +
Preference number: 3 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRCCLCS*VRGAAS
Trigger: AGAGGCTGCCCCTCTCACCAAAGAACAGAGGCAGCA...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CAA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTCAGGCCAAACTGTGCTaGAGCAATCAGGAGCCCAGA +
Preference number: 3 (lower is better)
Translates to: GNSYWDGISMPYGASGISQAKLC*SNQEPR
Trigger: TCTGGGCTCCTGATTGCTCAAGCACAGTTTGGCCTG...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR GCA 72 bp AAAGGCATAGAATGCTCTATGTCACCCACTCCCTGCTaGTGTTGTTTCTGCTTATCCCCACAGCTTACAGGG +
Preference number: 3 (lower is better)
Translates to: KGIECSMSPTPC*CCFCLSPQLTG
Trigger: CCCTGTAAGCTGTGGGGATAAGCAGAAACAACAGCAGCAGGGAGTGGGTGACATAGAGCATTCTATGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR CCA 72 bp TCACCACTAGAGGTCAATGGGCAACAGCTATTGGGATaGTATCAGCATGCCCTACGGTGCAAGTGGAATTTC +
Preference number: 3 (lower is better)
Translates to: SPLEVNGQQLLG*YQHALRCKWNF
Trigger: GAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGTGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CAA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGTTCTTACAAGGGACCTaGGTTAGGTGCAGATTTAAT +
Preference number: 3 (lower is better)
Translates to: TRGQWATAIGMVSACPTVFLQGT*VRCRFN
Trigger: ATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGAA...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR TCA 72 bp TTGCAAAAGCAAGTGCAATGTGGTCATAGCTGGCTGTaGGACATGGAGCCTCTTTCCTCATGCAAAGTTCAC +
Preference number: 3 (lower is better)
Translates to: LQKQVQCGHSWL*DMEPLSSCKVH
Trigger: GTGAACTTTGCATGAGGAAAGAGGCTCCATGTCTCACAGCCAGCTATGACCACATTGCACTTGCTTTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR TCA 72 bp GTAGTTGAAATCCTCTTCATCAGGCCAAACTGTGCTTaGGCAATCAGGAGCCCAGAAAGATGGAACCCATTG +
Preference number: 3 (lower is better)
Translates to: VVEILFIRPNCA*AIRSPERWNPL
Trigger: CAATGGGTTCCATCTTTCTGGGCTCCTGATTGCTCAAGCACAGTTTGGCCTGATGAAGAGGATTTCAACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR CCA 72 bp ATGATGGAGAGAACGGTAACCATGAGGAAAGCTTCTTaGAGTAAAGCACTCCTCTCTCCAATGCAGAGGGTA +
Preference number: 3 (lower is better)
Translates to: MMERTVTMRKAS*SKALLSPMQRV
Trigger: TACCCTCTGCATTGGAGAGAGGAGTGCTTTACTCCAAGAAGCTTTCCTCATGGTTACCGTTCTCTCCATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR-3UTR CAA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGTTTAAAGCTCATACTTaGTTCTTGTCCTTGTGGACA +
Preference number: 3 (lower is better)
Translates to: TRGQWATAIGMVSACPTVFKAHT*FLSLWT
Trigger: TGTCCACAAGGACAAGAACAAAGTATGAGCTTTAAA...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR GCA 72 bp CACAGCTTATCCTATGACAATGTCAAAGGCATAGAATaGTCTATGTCACCCACTCCCTGCTGCTGTTGTTTC +
Preference number: 3 (lower is better)
Translates to: HSLSYDNVKGIE*SMSPTPCCCCF
Trigger: GAAACAACAGCAGCAGGGAGTGGGTGACATAGAGCATTCTATGCCTTTGACATTGTCATAGGATAAGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR CCA 72 bp AGCAAGTGCAATGTGGTCATAGCTGGCTGTGAGACATaGAGCCTCTTTCCTCATGCAAAGTTCACTGTTTTA +
Preference number: 3 (lower is better)
Translates to: SKCNVVIAGCET*SLFPHAKFTVL
Trigger: TAAAACAGTGAACTTTGCATGAGGAAAGAGGCTCCATGTCTCACAGCCAGCTATGACCACATTGCACTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR TCA 72 bp GTTCACTGTTTTACAGTCAGAGAACCACTGCATGTGTaGTTGTCAAATGCTAATGCTGTCATGGGTCCCTTC +
Preference number: 3 (lower is better)
Translates to: VHCFTVREPLHV*LSNANAVMGPF
Trigger: GAAGGGACCCATGACAGCATTAGCATTTGACAATCACACATGCAGTGGTTCTCTGACTGTAAAACAGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR TCA 72 bp AGTTCCATGGCCAGAAGAGAAGTGCTAGGCAGGGAATaGTTATTTTGCAAAAGCAAGTGCAATGTGGTCATA +
Preference number: 3 (lower is better)
Translates to: SSMARREVLGRE*LFCKSKCNVVI
Trigger: TATGACCACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTGGCCATGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGGCGGCCACAGGCCCCTaGGCAGCCCCCGACCCATGG +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVAATGP*AAPDPW
Trigger: CCATGGGTCGGGGGCTGCTCAGGGGCCTGTGGCCGC...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCGCGGCCACAGGCCCCTaGGCAGCCCCCGACCCATGG +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRAATGP*AAPDPW
Trigger: CCATGGGTCGGGGGCTGCTCAGGGGCCTGTGGCCGC...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGGCGGCCGAGGGAAGCTaGACAGGAGTCCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVAAEGS*TGVRLL
Trigger: CAGGAGCCGGACTCCTGTGCAGCTTCCCTCGGCCGC...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCCGGCAGCGCAGATGTaGGGGCCAGATGTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVPAAQM*GPDVAP
Trigger: GGGCGCCACATCTGGCCCGCACATCTGCGCTGCCGG...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGCGTGCGGTGGGATCGTaGTGGCGATACGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVRAVGS*WRYAST
Trigger: TGTGGACGCGTATCGCCAGCACGATCCCACCGCACG...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGTGTGCGGGCCAGATGTaGCGCCCGCTCGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVCAGQM*RPLASQ
Trigger: CTGGCTGGCGAGCGGGCGCCACATCTGGCCCGCACA...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGGCAGCCCCCGACCCATaGCAGACCCCGCTGCTCGTC +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVAAPDP*QTPLLV
Trigger: GACGAGCAGCGGGGTCTGCCATGGGTCGGGGGCTGC...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGCCTGTCCCGAGCGGGTaGACGCGCGGGGGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRPVPSG*TRGGVV
Trigger: GACGACACCCCCGCGCGTGCACCCGCTCGGGACAGG...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTGCAGCCCCCGACCCATaGCAGACCCCGCTGCTCGTC +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISAAPDP*QTPLLV
Trigger: GACGAGCAGCGGGGTCTGCCATGGGTCGGGGGCTGC...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTGCGGCCGAGGGAAGCTaGACAGGAGTCCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISAAEGS*TGVRLL
Trigger: CAGGAGCCGGACTCCTGTGCAGCTTCCCTCGGCCGC...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGGTCCACAGGACGATGTaGAGCGGCCACAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVVHRTM*SGHRPL
Trigger: CAGGGGCCTGTGGCCGCTGCACATCGTCCTGTGGAC...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGCCCGGGCGAGGGAGCTaGCCAGCTTGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRPGRGS*PACAGP
Trigger: AGGACCTGCGCAAGCTGGGCAGCTCCCTCGCCCGGG...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGCTCTTGAGGTCCCTGTaGACGATGGGCATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVLLRSL*TMGILG
Trigger: GCCCAAGATGCCCATCGTGCACAGGGACCTCAAGAG...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGCTTTCGACACAGGGGTaGTCCCGCACCTTGGAACCA +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVLSTQG*SRTLEP
Trigger: TGGTTCCAAGGTGCGGGAGCACCCCTGTGTCGAAAG...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTCCACACACTGGGCTGTaGGACGGGCCTCTGGGTCGT +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISPHTGL*DGPLGR
Trigger: ACGACCCAGAGGCCCGTCTCACAGCCCAGTGTGTGG...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGGATGCTCCAGCTCACTaGAGCGTTCTGCCACACACT +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVDAPAH*SVLPHT
Trigger: AGTGTGTGGCAGAACGCTTCAGTGAGCTGGAGCATC...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCGTGCGGTGGGATCGTaGTGGCGATACGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVRAVGS*WRYAST
Trigger: TGTGGACGCGTATCGCCAGCACGATCCCACCGCACG...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGTCCCAGCTGATGACATaGCGCGTCAGGTACTCCTGT +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVSQLMT*RVRYSC
Trigger: ACAGGAGTACCTGACGCGGCATGTCATCAGCTGGGA...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGGGGTGTCCAGCTCAATaGGCAGCAGCTCTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVGCPAQ*AAALCC
Trigger: ACAACACAGAGCTGCTGCCCATTGAGCTGGACACCC...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGCTTGGGCCTCCCACATaGAGTGTGATCACTGTGGAG +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVLGPPT*SVITVE
Trigger: CTCCACAGTGATCACACTCCATGTGGGAGGCCCAAG...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCGGTCCCTGTGCACGATaGGCATCTTGGGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRGPCAR*ASWASH
Trigger: GTGGGAGGCCCAAGATGCCCATCGTGCACAGGGACC...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGGTGGTGGCAGGAGGCTaGTGCCTGTCACTTGAAATA +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVVVAGG*CLSLEI
Trigger: TATTTCAAGTGACAGGCATCAGCCTCCTGCCACCAC...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCGCCGGTTTCCCAGGTTaGACTCAGCTTCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRAGFPG*TQLLLP
Trigger: CGGCAGCAGAAGCTGAGTTCAACCTGGGAAACCGGC...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGCCACACACTGGGCTGTaGGACGGGCCTCTGGGTCGT +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRPHTGL*DGPLGR
Trigger: ACGACCCAGAGGCCCGTCTCACAGCCCAGTGTGTGG...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGAGGCCAAACTGTGCTTaGGCAATCAGGAGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVRPNCA*AIRSPE
Trigger: TTCTGGGCTCCTGATTGCTCAAGCACAGTTTGGCCT...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGCATCAGGCCAAACTGTaGTTGAGCAATCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVHQAKL*LSNQEP
Trigger: GGGCTCCTGATTGCTCAAGCACAGTTTGGCCTGATG...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGGGGATGGTATCAGCATaGCCTACGGTGCAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVGMVSA*PTVQVE
Trigger: TTCCACTTGCACCGTAGGGCATGCTGATACCATCCC...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCCGTTCTGCCACACACTaGGCTGTGAGACGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRRSATH*AVRRAS
Trigger: AGAGGCCCGTCTCACAGCCCAGTGTGTGGCAGAACG...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGGAGGGGCAGCCTCTTTaGACATGGCCCAGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSREGQPL*TWPSLP
Trigger: GGGCAGGCTGGGCCATGTCCAAAGAGGCTGCCCCTC...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTGCCGGTTTCCCAGGTTaGACTCAGCTTCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISAGFPG*TQLLLP
Trigger: CGGCAGCAGAAGCTGAGTTCAACCTGGGAAACCGGC...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTCCTGTCCCGAGCGGGTaGACGCGCGGGGGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCPVPSG*TRGGVV
Trigger: GACGACACCCCCGCGCGTGCACCCGCTCGGGACAGG...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTGGTACTCCTGTAGGTTaGCCTTGGCGTGGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISGTPVG*PWRGRR
Trigger: CCGCCTTCCACGCCAAGGGCAACCTACAGGAGTACC...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCCTCTTGAGGTCCCTGTaGACGATGGGCATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRLLRSL*TMGILG
Trigger: GCCCAAGATGCCCATCGTGCACAGGGACCTCAAGAG...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGGGACATGGCCCAGCCTaGCCCAGAAGAGCTATTTGG +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVGHGPA*PRRAIW
Trigger: CCAAATAGCTCTTCTGGGGCAGGCTGGGCCATGTCC...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGGCGGTGGGATCGTGCTaGCGATACGCGTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRAVGSC*RYASTG
Trigger: TCCTGTGGACGCGTATCGCCAGCACGATCCCACCGC...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCCTTCTGAACGTGCGGTaGGATCGTGCTGGCGATACG +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRLLNVR*DRAGDT
Trigger: CGTATCGCCAGCACGATCCCACCGCACGTTCAGAAG...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGGGGAGCTTGGGGTCATaGCAAACTGTCTCTAGTGTT +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVGSLGS*QTVSSV
Trigger: AACACTAGAGACAGTTTGCCATGACCCCAAGCTCCC...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTGGCAACTCCCAGTGGTaGCAGGAGGCTGATGCCTGT +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISGNSQW*QEADAC
Trigger: ACAGGCATCAGCCTCCTGCCACCACTGGGAGTTGCC...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGTTGCCCTTGGCGTaGAAGGCGGTGATCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISRLPLA*KAVISQ
Trigger: CTGGCTGATCACCGCCTTCCACGCCAAGGGCAACCT...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGGCACGATGGGCATCTTaGGCCTCCCACATGGAGTGT +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVARWAS*ASHMEC
Trigger: ACACTCCATGTGGGAGGCCCAAGATGCCCATCGTGC...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGTGTGAGACGGGCCTCTaGGTCGTGGTCCCAGCACTC +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRCETGL*VVVPAL
Trigger: GAGTGCTGGGACCACGACCCAGAGGCCCGTCTCACA...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGATGGGCAACAGCTATTaGGATGGTATCAGCATGCCC +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVMGNSY*DGISMP
Trigger: GGGCATGCTGATACCATCCCAATAGCTGTTGCCCAT...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCGGATATTGGAGCTCTTaGGGTCCCTGTGCACGATGG +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRGYWSS*GPCARW
Trigger: CCATCGTGCACAGGGACCTCAAGAGCTCCAATATCC...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCGGTCATAGCTGGCTGTaGGACATGGAGCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRGHSWL*DMEPLS
Trigger: GGAAAGAGGCTCCATGTCTCACAGCCAGCTATGACC...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTTCCACATCCGACTTCTaGACGTGCGGTGGGATCGTG +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISSTSDF*TCGGIV
Trigger: CACGATCCCACCGCACGTTCAGAAGTCGGATGTGGA...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359013.4
CDS-3UTR GCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGGGGAAAGATCTTGACTaGCACTGTCTCAAACTGCTC +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVGKDLD*HCLKLL
Trigger: GAGCAGTTTGAGACAGTGGCAGTCAAGATCTTTCCC...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTCCCGGGCGAGGGAGCTaGCCAGCTTGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCPGRGS*PACAGP
Trigger: AGGACCTGCGCAAGCTGGGCAGCTCCCTCGCCCGGG...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGGAGAGCCTGTCCAGATaGTCCAGCTCACTGAAGCGT +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVESLSR*SSSLKR
Trigger: ACGCTTCAGTGAGCTGGAGCATCTGGACAGGCTCTC...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTGGACATGGCCCAGCCTaGCCCAGAAGAGCTATTTGG +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISGHGPA*PRRAIW
Trigger: CCAAATAGCTCTTCTGGGGCAGGCTGGGCCATGTCC...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGGGGGCAGCTTCCTGCTaGCTCTGTTCTTTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVGAASC*LCSLVR
Trigger: TCTCACCAAAGAACAGAGGCAGCAGGAAGCTGCCCC...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCTCAGGGGCAGCTTCCTaGTGCCTCTGTTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRSGAAS*CLCSLV
Trigger: CACCAAAGAACAGAGGCAGCAGGAAGCTGCCCCTGA...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGGAACAGGAGGCAGGATaGTCACCTGAGTATTTTGCT +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVEQEAG*SPEYFA
Trigger: AGCAAAATACTCAGGTGAGCATCCTGCCTCCTGTTC...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTCTTCTGAACGTGCGGTaGGATCGTGCTGGCGATACG +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISLLNVR*DRAGDT
Trigger: CGTATCGCCAGCACGATCCCACCGCACGTTCAGAAG...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGGGCAACTCCCAGTGGTaGCAGGAGGCTGATGCCTGT +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRGNSQW*QEADAC
Trigger: ACAGGCATCAGCCTCCTGCCACCACTGGGAGTTGCC...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCGGTGCTCCCGCACCTTaGAACCAAATGGAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRGAPAP*NQMEAH
Trigger: ATGAGCCTCCATTTGGTTCCAAGGTGCGGGAGCACC...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCACCATCTGGATGCCCTaGTGGTTGAGCCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRTIWMP*WLSQKL
Trigger: CAGCTTCTGGCTCAACCACCAGGGCATCCAGATGGT...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGGTCTCACACACCATCTaGATGCCCTGGTGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVVSHTI*MPWWLS
Trigger: GCTCAACCACCAGGGCATCCAGATGGTGTGTGAGAC...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCGAACCCCGGGAACACTaGTCCTCAAACAGTGCCACT +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRREPREH*SSNSAT
Trigger: AGTGGCACTGTTTGAGGACCAGTGTTCCCGGGGTTC...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGACCACTAGAGGTCAATaGGCAACAGCTATTGGGATG +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVTTRGQ*ATAIGM
Trigger: CATCCCAATAGCTGTTGCCCATTGACCTCTAGTGGT...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGGTGGTGGCAGGAGGCTaGTGCCTGTCACTTGAAATA +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVVVAGG*CLSLEI
Trigger: TATTTCAAGTGACAGGCATCAGCCTCCTGCCACCAC...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTTGGCACACGTGGAGCTaGTGTCAGAGCGGTCATCTT +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISWHTWS*CQSGHL
Trigger: AAGATGACCGCTCTGACATCAGCTCCACGTGTGCCA...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGTGTCTCAAACTGCTCTaGAGTGTTCTGCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVCLKLL*SVLLQL
Trigger: AAGCTGAAGCAGAACACTTCAGAGCAGTTTGAGACA...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTGGATATTGGAGCTCTTaGGGTCCCTGTGCACGATGG +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISGYWSS*GPCARW
Trigger: CCATCGTGCACAGGGACCTCAAGAGCTCCAATATCC...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTGATGCTCCAGCTCACTaGAGCGTTCTGCCACACACT +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISDAPAH*SVLPHT
Trigger: AGTGTGTGGCAGAACGCTTCAGTGAGCTGGAGCATC...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGAGGCCAAACTGTGCTTaGGCAATCAGGAGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVRPNCA*AIRSPE
Trigger: TTCTGGGCTCCTGATTGCTCAAGCACAGTTTGGCCT...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGCACCTTCACATTTTGTaGACGTGGACTGGAGATAAC +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVHLHIL*TWTGDN
Trigger: GTTATCTCCAGTCCACGTTCACAAAATGTGAAGGTG...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGAATTTCTGCAAAGGTTaGGAAGGCTGGCATGATGGA +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVNFCKG*EGWHDG
Trigger: TCCATCATGCCAGCCTTCTCAACCTTTGCAGAAATT...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTTCCCAGCTGATGACATaGCGCGTCAGGTACTCCTGT +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISSQLMT*RVRYSC
Trigger: ACAGGAGTACCTGACGCGGCATGTCATCAGCTGGGA...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCTGGAGCCATGTATCTTaGAGTTCCCACCTGCCCACT +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRWSHVS*SSHLPT
Trigger: AGTGGGCAGGTGGGAACTGCAAGATACATGGCTCCA...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTTCAGGGGCAGCTTCCTaGTGCCTCTGTTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISSGAAS*CLCSLV
Trigger: CACCAAAGAACAGAGGCAGCAGGAAGCTGCCCCTGA...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCATCAGGCCAAACTGTaGTTGAGCAATCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVHQAKL*LSNQEP
Trigger: GGGCTCCTGATTGCTCAAGCACAGTTTGGCCTGATG...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGGGGATGGTATCAGCATaGCCTACGGTGCAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVGMVSA*PTVQVE
Trigger: TTCCACTTGCACCGTAGGGCATGCTGATACCATCCC...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCATGGTAGGGGAGCTTaGGGTCATGGCAAACTGTCT +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVHGRGA*GHGKLS
Trigger: AGACAGTTTGCCATGACCCCAAGCTCCCCTACCATG...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGTGTTCTGCTTCAGCTTaGCCTTATAGACCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVCSASA*PYRPQQ
Trigger: TTGCTGAGGTCTATAAGGCCAAGCTGAAGCAGAACA...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGGCACGATGGGCATCTTaGGCCTCCCACATGGAGTGT +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRARWAS*ASHMEC
Trigger: ACACTCCATGTGGGAGGCCCAAGATGCCCATCGTGC...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGAGAGCACCAGAGCCATaGAGTAGACATCGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVRAPEP*SRHRSA
Trigger: AGCAGACCGATGTCTACTCCATGGCTCTGGTGCTCT...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTTCTCACAGATGGAGGTaGTGCTGCAGTTGCTCATGC +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISSHRWR*CCSCSC
Trigger: GCATGAGCAACTGCAGCATCACCTCCATCTGTGAGA...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGCTTCAGATTGATGTCTaGGAAGATGTCCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVLQIDV*EDVLLC
Trigger: ACAGAGAAGGACATCTTCTCAGACATCAATCTGAAG...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGGTGCTAGGCAGGGAATaGTTATTTTGCAAAAGCAAG +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVVLGRE*LFCKSK
Trigger: CTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCAC...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTGTCCACAGGACGATGTaGAGCGGCCACAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCVHRTM*SGHRPL
Trigger: CAGGGGCCTGTGGCCGCTGCACATCGTCCTGTGGAC...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGCTTGCAGTTCCCACCTaGCCACTGTTAGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRLAVPT*PLLARS
Trigger: TGACCTGGCTAACAGTGGGCAGGTGGGAACTGCAAG...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCACACGTTGTCCTTCATaGTTTCGACACAGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRTRCPS*FRHRGA
Trigger: AGCACCCCTGTGTCGAAAGCATGAAGGACAACGTGT...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGACACGTTGTCCTTCATaGTTTCGACACAGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVTRCPS*FRHRGA
Trigger: AGCACCCCTGTGTCGAAAGCATGAAGGACAACGTGT...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGCTCACTGAAGCGTTCTaGCACACACTGGGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRLTEAF*HTLGCE
Trigger: CTCACAGCCCAGTGTGTGGCAGAACGCTTCAGTGAG...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCTCACCCACTCCCTGCTaGTGTTGTTTCTGCTTATCC +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRSPTPC*CCFCLS
Trigger: GGATAAGCAGAAACAACAGCAGCAGGGAGTGGGTGA...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCGCGCCTCTATGCTACTaGAGCCACACTGTCTTTAAC +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRAPLCY*SHTVFN
Trigger: GTTAAAGACAGTGTGGCTGCAGTAGCATAGAGGCGC...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCACACAGACTTCCTGTaGCTTCTCACAGATGGAGGT +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVHTDFL*LLTDGG
Trigger: ACCTCCATCTGTGAGAAGCCACAGGAAGTCTGTGTG...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGGGGTGTCCAGCTCAATaGGCAGCAGCTCTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRGCPAQ*AAALCC
Trigger: ACAACACAGAGCTGCTGCCCATTGAGCTGGACACCC...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGACCATCTGGATGCCCTaGTGGTTGAGCCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRTIWMP*WLSQKL
Trigger: CAGCTTCTGGCTCAACCACCAGGGCATCCAGATGGT...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTGAGGGGCAGCCTCTTTaGACATGGCCCAGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCEGQPL*TWPSLP
Trigger: GGGCAGGCTGGGCCATGTCCAAAGAGGCTGCCCCTC...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR CAA 72 bp AGAAACTCACCACTAGAGGTCAATGGGCAACAGCTATaGGGATGGTATCAGCATGCCCTACGGTGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: RNSPLEVNGQQL*GWYQHALRCKW
Trigger: CCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGTGGTGAGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTTTATTAACCGACTTCTaGACGTGCGGTGGGATCGTG +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISLLTDF*TCGGIV
Trigger: CACGATCCCACCGCACGTTCAGAAGTCGGTTAATAA...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295754.10
CDS-3UTR TCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGCTGTCACTTGAAATATaGCTAGCAACAAGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVLSLEI*LATSQD
Trigger: ATCCTGACTTGTTGCTAGTCATATTTCAAGTGACAG...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGATAGTATTGTGTAGTTaGAATCCTCTTCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVIVLCS*NPLHQA
Trigger: GGCCTGATGAAGAGGATTTCAACTACACAATACTAT...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGGGGAAAGATCTTGACTaGCACTGTCTCAAACTGCTC +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVGKDLD*HCLKLL
Trigger: GAGCAGTTTGAGACAGTGGCAGTCAAGATCTTTCCC...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGTGGAGTATGTTCTCATaGTTCAGATTGATGTCTGAG +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVWSMFS*FRLMSE
Trigger: CTCAGACATCAATCTGAAGCATGAGAACATACTCCA...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGTTTTACTTCTCCCACTaGATTACAGCGAGATGTCAT +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVFYFSH*ITARCH
Trigger: ATGACATCTCGCTGTAATGCAGTGGGAGAAGTAAAA...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTTCACCCACTCCCTGCTaGTGTTGTTTCTGCTTATCC +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISSPTPC*CCFCLS
Trigger: GGATAAGCAGAAACAACAGCAGCAGGGAGTGGGTGA...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTGCGGTGGGATCGTGCTaGCGATACGCGTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCAVGSC*RYASTG
Trigger: TCCTGTGGACGCGTATCGCCAGCACGATCCCACCGC...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGTCTGGTTGTCACAGGTaGAAAATCTCACATCACAAA +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVSGCHR*KISHHK
Trigger: TTTGTGATGTGAGATTTTCCACCTGTGACAACCAGA...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTCACACAGACTTCCTGTaGCTTCTCACAGATGGAGGT +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISHTDFL*LLTDGG
Trigger: ACCTCCATCTGTGAGAAGCCACAGGAAGTCTGTGTG...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGCATGGTAGGGGAGCTTaGGGTCATGGCAAACTGTCT +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRHGRGA*GHGKLS
Trigger: AGACAGTTTGCCATGACCCCAAGCTCCCCTACCATG...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCAGCAGCTCTGTGTTGTaGTTGATGTTGTTGGCACAC +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRSSSVL*LMLLAH
Trigger: GTGTGCCAACAACATCAACCACAACACAGAGCTGCT...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGTCAGCCGTCAGGAACTaGAGTATGTTCTCATGCTTC +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVSAVRN*SMFSCF
Trigger: GAAGCATGAGAACATACTCCAGTTCCTGACGGCTGA...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCTCAGCCGTCAGGAACTaGAGTATGTTCTCATGCTTC +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRSAVRN*SMFSCF
Trigger: GAAGCATGAGAACATACTCCAGTTCCTGACGGCTGA...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTGGTCCCTGTGCACGATaGGCATCTTGGGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCGPCAR*ASWASH
Trigger: GTGGGAGGCCCAAGATGCCCATCGTGCACAGGGACC...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGCACCTTGGAACCAAATaGAGGCTCATAATCTTTTAC +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVHLGTK*RLIIFY
Trigger: GTAAAAGATTATGAGCCTCCATTTGGTTCCAAGGTG...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTGAAGCTGGGAATTTCTaGTCGCCCTCGATCTCTCAA +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISEAGNF*SPSISQ
Trigger: TTGAGAGATCGAGGGCGACCAGAAATTCCCAGCTTC...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTTGTGAGACGGGCCTCTaGGTCGTGGTCCCAGCACTC +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCCETGL*VVVPAL
Trigger: GAGTGCTGGGACCACGACCCAGAGGCCCGTCTCACA...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGGCTGGCTGTGAGACATaGAGCCTCTTTCCTCATGCA +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRAGCET*SLFPHA
Trigger: TGCATGAGGAAAGAGGCTCCATGTCTCACAGCCAGC...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGTTTTCTAACTGCAAATaGGACCTTTGTGTCCCACAT +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVFSNCK*DLCVPH
Trigger: ATGTGGGACACAAAGGTCCCATTTGCAGTTAGAAAA...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTCAACAGCTATTGGGATaGTATCAGCATGCCCTACGG +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISQQLLG*YQHALR
Trigger: CCGTAGGGCATGCTGATACCATCCCAATAGCTGTTG...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGACCACTAGAGGTCAATaGGCAACAGCTATTGGGATG +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVTTRGQ*ATAIGM
Trigger: CATCCCAATAGCTGTTGCCCATTGACCTCTAGTGGT...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCTGTCTCAAACTGCTCTaGAGTGTTCTGCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRCLKLL*SVLLQL
Trigger: AAGCTGAAGCAGAACACTTCAGAGCAGTTTGAGACA...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCGTTTACAGTGAGAAGTaGGGCAGCTTTGTAAGTGTC +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRVYSEK*GSFVSV
Trigger: GACACTTACAAAGCTGCCTCACTTCTCACTGTAAAC...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGTATATACCCAGAGAATaGCTGCTTGAATGGACATTT +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVYIPRE*LLEWTF
Trigger: AAATGTCCATTCAAGCAGTCATTCTCTGGGTATATA...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGTACAGCTGGGGCAGATaGTTTCATCTTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRYSWGR*FHLSGP
Trigger: AGGCCCAGAAAGATGAAATCATCTGCCCCAGCTGTA...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359013.4
CDS-3UTR GCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGTTGTGGAAACTTGACTaGACCGTTGTTGTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVLWKLD*TVVVSD
Trigger: GTCACTGACAACAACGGTGCAGTCAAGTTTCCACAA...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTTGCTGCAGTTGCTCATaGAGGATTTCTGGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISCCSCS*RISGCH
Trigger: GTGACAACCAGAAATCCTGCATGAGCAACTGCAGCA...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTGCCACTGTCTCAAACTaGTCTGAAGTGTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISATVSN*SEVFCF
Trigger: GAAGCAGAACACTTCAGAGCAGTTTGAGACAGTGGC...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTATGTCACCCACTCCCTaGTGCTGTTGTTTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISMSPTP*CCCFCL
Trigger: TAAGCAGAAACAACAGCAGCAGGGAGTGGGTGACAT...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGAAATTTACACAGTTGTaGAAACTTGACTGCACCGTT +
Preference number: 4 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVKFTQL*KLDCTV
Trigger: AACGGTGCAGTCAAGTTTCCACAACTGTGTAAATTT...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGGGGAGCTTGGGGTCATaGCAAACTGTCTCTAGTGTT +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRGSLGS*QTVSSV
Trigger: AACACTAGAGACAGTTTGCCATGACCCCAAGCTCCC...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGCAGCTCTGTGTTGTaGTTGATGTTGTTGGCACAC +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISSSSVL*LMLLAH
Trigger: GTGTGCCAACAACATCAACCACAACACAGAGCTGCT...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTAGGTTGCCCTTGGCGTaGAAGGCGGTGATCAGCCAG +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCRLPLA*KAVISQ
Trigger: CTGGCTGATCACCGCCTTCCACGCCAAGGGCAACCT...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTCGTTCTGCCACACACTaGGCTGTGAGACGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCRSATH*AVRRAS
Trigger: AGAGGCCCGTCTCACAGCCCAGTGTGTGGCAGAACG...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCCTTCCTTCTCTGCTTaGTTCTGGAGTTCTCCAATA +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVPSFSA*FWSSPI
Trigger: TATTGGAGAACTCCAGAACCAAGCAGAGAAGGAAGG...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGAGGAGCCCAGAAAGATaGAACCCATTGGTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVRSPER*NPLVFV
Trigger: TACAAACACCAATGGGTTCCATCTTTCTGGGCTCCT...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGCAACAGCTATTGGGATaGTATCAGCATGCCCTACGG +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRQQLLG*YQHALR
Trigger: CCGTAGGGCATGCTGATACCATCCCAATAGCTGTTG...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGATATGTCTCAGTGGATaGGCAGTCCTATTACAGCTG +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVICLSG*AVLLQL
Trigger: CAGCTGTAATAGGACTGCCCATCCACTGAGACATAT...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359013.4
CDS-3UTR TCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGACAGTTGTGGAAACTTaGCTGCACCGTTGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRTVVET*LHRCCQ
Trigger: CTGACAACAACGGTGCAGTCAAGTTTCCACAACTGT...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCCTGATGCCTGTCACTTaGAATATGACTAGCAACAAG +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRLMPVT*NMTSNK
Trigger: CTTGTTGCTAGTCATATTTCAAGTGACAGGCATCAG...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCTGATGCCTGTCACTTaGAATATGACTAGCAACAAG +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVLMPVT*NMTSNK
Trigger: CTTGTTGCTAGTCATATTTCAAGTGACAGGCATCAG...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCGAACCACTGCATGTGTaGTTGTCAAATGCTAATGCT +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRREPLHV*LSNANA
Trigger: AGCATTAGCATTTGACAATCACACATGCAGTGGTTC...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGTGGCTTCACTTTTTaGAACGCTGTGCTGACCAAA +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISSGFTF*NAVLTK
Trigger: TTTGGTCAGCACAGCGTTTCAAAAAGTGAAGCCACT...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAATTTCTGCAAAGGTTaGGAAGGCTGGCATGATGGA +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISNFCKG*EGWHDG
Trigger: TCCATCATGCCAGCCTTCTCAACCTTTGCAGAAATT...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCAGCCACAGTATCCTCTaGCACTACATTCCAGTTTAT +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRSHSIL*HYIPVY
Trigger: ATAAACTGGAATGTAGTGTCAGAGGATACTGTGGCT...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTTTGTGGAAACTTGACTaGACCGTTGTTGTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISLWKLD*TVVVSD
Trigger: GTCACTGACAACAACGGTGCAGTCAAGTTTCCACAA...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGTGCTGCAGTTGCTCATaGAGGATTTCTGGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRCCSCS*RISGCH
Trigger: GTGACAACCAGAAATCCTGCATGAGCAACTGCAGCA...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTCTTTCGACACAGGGGTaGTCCCGCACCTTGGAACCA +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCLSTQG*SRTLEP
Trigger: TGGTTCCAAGGTGCGGGAGCACCCCTGTGTCGAAAG...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAGTCAGAGAACCACTaGATGTGTGATTGTCAAATG +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVQSENH*MCDCQM
Trigger: CATTTGACAATCACACATGCAGTGGTTCTCTGACTG...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCCAGTCAGAGAACCACTaGATGTGTGATTGTCAAATG +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRQSENH*MCDCQM
Trigger: CATTTGACAATCACACATGCAGTGGTTCTCTGACTG...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCTTTTGCAAAAGCAAGTaGAATGTGGTCATAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRFCKSK*NVVIAG
Trigger: GCCAGCTATGACCACATTGCACTTGCTTTTGCAAAA...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGGAACAGGAGGCAGGATaGTCACCTGAGTATTTTGCT +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSREQEAG*SPEYFA
Trigger: AGCAAAATACTCAGGTGAGCATCCTGCCTCCTGTTC...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCCTCATGCAGGATTTCTaGTTGTCACAGGTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRLMQDF*LSQVEN
Trigger: ATTTTCCACCTGTGACAACCAGAAATCCTGCATGAG...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCTTCATAATGCACTTTaGAGAAGCAGCATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVLHNAL*RSSIFQ
Trigger: CTGGAAGATGCTGCTTCTCCAAAGTGCATTATGAAG...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCTCTCCAAATTCATCCTaGATTCTAGGACTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRSPNSS*ILGLLE
Trigger: CTCCAGAAGTCCTAGAATCCAGGATGAATTTGGAGA...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGTTCATTAGTAGATGGTaGGGCAATCGCATGGATGGG +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRFISRW*GNRMDG
Trigger: CCCATCCATGCGATTGCCCCACCATCTACTAATGAA...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCATGATTTCATCTTTCTaGGCCTCCATTTCCACATCC +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRMISSF*ASISTS
Trigger: GGATGTGGAAATGGAGGCCCAGAAAGATGAAATCAT...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359013.4
CDS-3UTR TCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCCTGTCACTTGAAATATaGCTAGCAACAAGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRLSLEI*LATSQD
Trigger: ATCCTGACTTGTTGCTAGTCATATTTCAAGTGACAG...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTTGGCACACGTGGAGCTaGTGTCAGAGCGGTCATCTT +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCWHTWS*CQSGHL
Trigger: AAGATGACCGCTCTGACATCAGCTCCACGTGTGCCA...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTCTTCAGATTGATGTCTaGGAAGATGTCCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISLQIDV*EDVLLC
Trigger: ACAGAGAAGGACATCTTCTCAGACATCAATCTGAAG...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTTCTCATGCTTCAGATTaGTGTCTGAGAAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISSHASD*CLRRCP
Trigger: AGGACATCTTCTCAGACATCAATCTGAAGCATGAGA...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTTGGCGTGGAAGGCGGTaGTCAGCCAGTATTGTTTCC +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCWRGRR*SASIVS
Trigger: GGAAACAATACTGGCTGATCACCGCCTTCCACGCCA...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGATAGTATTGTGTAGTTaGAATCCTCTTCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVIVLCS*NPLHQA
Trigger: GGCCTGATGAAGAGGATTTCAACTACACAATACTAT...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGGCAACAAGTCAGGATTaGTGGTGTTATATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVATSQD*WCYILL
Trigger: CAGAAGAATATAACACCAGCAATCCTGACTTGTTGC...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTCTTGCAGTTCCCACCTaGCCACTGTTAGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCLAVPT*PLLARS
Trigger: TGACCTGGCTAACAGTGGGCAGGTGGGAACTGCAAG...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGTTTTACTTCTCCCACTaGATTACAGCGAGATGTCAT +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVFYFSH*ITARCH
Trigger: ATGACATCTCGCTGTAATGCAGTGGGAGAAGTAAAA...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTCTCACTGAAGCGTTCTaGCACACACTGGGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCLTEAF*HTLGCE
Trigger: CTCACAGCCCAGTGTGTGGCAGAACGCTTCAGTGAG...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCGAGCCTCTTTCCTCATaGAAAGTTCACTGTTTTACA +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRREPLSS*KVHCFT
Trigger: TGTAAAACAGTGAACTTTGCATGAGGAAAGAGGCTC...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTCTCATGCAGGATTTCTaGTTGTCACAGGTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISLMQDF*LSQVEN
Trigger: ATTTTCCACCTGTGACAACCAGAAATCCTGCATGAG...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTCTTGGGCCTCCCACATaGAGTGTGATCACTGTGGAG +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCLGPPT*SVITVE
Trigger: CTCCACAGTGATCACACTCCATGTGGGAGGCCCAAG...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTTCTCCAAATTCATCCTaGATTCTAGGACTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISSPNSS*ILGLLE
Trigger: CTCCAGAAGTCCTAGAATCCAGGATGAATTTGGAGA...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCACCTTGGAACCAAATaGAGGCTCATAATCTTTTAC +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVHLGTK*RLIIFY
Trigger: GTAAAAGATTATGAGCCTCCATTTGGTTCCAAGGTG...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGCCTTCCTTCTCTGCTTaGTTCTGGAGTTCTCCAATA +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRPSFSA*FWSSPI
Trigger: TATTGGAGAACTCCAGAACCAAGCAGAGAAGGAAGG...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGAGGAGCCCAGAAAGATaGAACCCATTGGTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRRSPER*NPLVFV
Trigger: TACAAACACCAATGGGTTCCATCTTTCTGGGCTCCT...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGGGTCCAGGTAGGCAGTaGAAAGAGCTAATGTTTACA +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRGPGRQ*KELMFT
Trigger: TGTAAACATTAGCTCTTTCCACTGCCTACCTGGACC...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGTGGACTGGAGATAACTaGAAACCATCTGCTATCCTT +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRWTGDN*KPSAIL
Trigger: AAGGATAGCAGATGGTTTTCAGTTATCTCCAGTCCA...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTCAGAGAATGACTGCTTaGATGGACATTTCTTACAAG +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISQRMTA*MDISYK
Trigger: CTTGTAAGAAATGTCCATTCAAGCAGTCATTCTCTG...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCTACCCAGAGAATGACTaGTTGAATGGACATTTCTTA +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRYPEND*LNGHFL
Trigger: TAAGAAATGTCCATTCAAGCAGTCATTCTCTGGGTA...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCAAATTTACACAGTTGTaGAAACTTGACTGCACCGTT +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRKFTQL*KLDCTV
Trigger: AACGGTGCAGTCAAGTTTCCACAACTGTGTAAATTT...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTAGAGCACCAGAGCCATaGAGTAGACATCGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCRAPEP*SRHRSA
Trigger: AGCAGACCGATGTCTACTCCATGGCTCTGGTGCTCT...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTTTCTCTGCTTGGTTCTaGAGTTCTCCAATAAAACCA +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISFSAWF*SSPIKP
Trigger: TGGTTTTATTGGAGAACTCCAGAACCAAGCAGAGAA...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCTCTTACAAGGGACCTTaGTTAGGTGCAGATTTAATT +
Preference number: 4 (lower is better)
Translates to: SYWDGISMPYGASGISRRSYKGP*LGADLI
Trigger: AATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGTCTTACAAGGGACCTTaGTTAGGTGCAGATTTAATT +
Preference number: 4 (lower is better)
Translates to: TRGQWATAIGMVSACPTVSYKGP*LGADLI
Trigger: AATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTTCCTATTTTAATACATaGGTACAGCTGAAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISSYFNT*VQLKCS
Trigger: GGAACACTTCAGCTGTACTCATGTATTAAAATAGGA...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTCACAAATTTTCTAACTaGAAATGGGACCTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: GNSYWDGISMPYGASGISHKFSN*KWDLCV
Trigger: GACACAAAGGTCCCATTTGCAGTTAGAAAATTTGTG...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGTCTGGTTGTCACAGGTaGAAAATCTCACATCACAAA +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRSGCHR*KISHHK
Trigger: TTTGTGATGTGAGATTTTCCACCTGTGACAACCAGA...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTGAAGCTGGGAATTTCTaGTCGCCCTCGATCTCTCAA +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCEAGNF*SPSISQ
Trigger: TTGAGAGATCGAGGGCGACCAGAAATTCCCAGCTTC...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGTTTTTCATTAGTAGATaGTGGGGCAATCGCATGGAT +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRFFISR*WGNRMD
Trigger: ATCCATGCGATTGCCCCACCATCTACTAATGAAAAA...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTATGGGCAACAGCTATTaGGATGGTATCAGCATGCCC +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCMGNSY*DGISMP
Trigger: GGGCATGCTGATACCATCCCAATAGCTGTTGCCCAT...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGTATATACCCAGAGAATaGCTGCTTGAATGGACATTT +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRYIPRE*LLEWTF
Trigger: AAATGTCCATTCAAGCAGTCATTCTCTGGGTATATA...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGTCCTATTTTAATACATaGGTACAGCTGAAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRSYFNT*VQLKCS
Trigger: GGAACACTTCAGCTGTACTCATGTATTAAAATAGGA...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTGCCACTGTCTCAAACTaGTCTGAAGTGTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCATVSN*SEVFCF
Trigger: GAAGCAGAACACTTCAGAGCAGTTTGAGACAGTGGC...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGCACAAATTTTCTAACTaGAAATGGGACCTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRHKFSN*KWDLCV
Trigger: GACACAAAGGTCCCATTTGCAGTTAGAAAATTTGTG...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTTGTTCTGCTTCAGCTTaGCCTTATAGACCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCCSASA*PYRPQQ
Trigger: TTGCTGAGGTCTATAAGGCCAAGCTGAAGCAGAACA...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTGGTCCAGGTAGGCAGTaGAAAGAGCTAATGTTTACA +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCGPGRQ*KELMFT
Trigger: TGTAAACATTAGCTCTTTCCACTGCCTACCTGGACC...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTTCTCATGCTTCAGATTaGTGTCTGAGAAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCSHASD*CLRRCP
Trigger: AGGACATCTTCTCAGACATCAATCTGAAGCATGAGA...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTATCAATCTCATTTCCTaGGGAAGTGCTAACACAGCT +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCINLIS*GSANTA
Trigger: AGCTGTGTTAGCACTTCCTCAGGAAATGAGATTGAT...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTGAACCACTGCATGTGTaGTTGTCAAATGCTAATGCT +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCEPLHV*LSNANA
Trigger: AGCATTAGCATTTGACAATCACACATGCAGTGGTTC...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTTGGACTGGAGATAACTaGAAACCATCTGCTATCCTT +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCWTGDN*KPSAIL
Trigger: AAGGATAGCAGATGGTTTTCAGTTATCTCCAGTCCA...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTAGCCACAGTATCCTCTaGCACTACATTCCAGTTTAT +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCSHSIL*HYIPVY
Trigger: ATAAACTGGAATGTAGTGTCAGAGGATACTGTGGCT...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTCTTCATAATGCACTTTaGAGAAGCAGCATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCLHNAL*RSSIFQ
Trigger: CTGGAAGATGCTGCTTCTCCAAAGTGCATTATGAAG...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTGAAAAGGATGAAGGCTaGGAGCAGAGAATAGTAACA +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCEKDEG*EQRIVT
Trigger: TGTTACTATTCTCTGCTCCCAGCCTTCATCCTTTTC...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR TCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTCAGAGAATGACTGCTTaGATGGACATTTCTTACAAG +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCQRMTA*MDISYK
Trigger: CTTGTAAGAAATGTCCATTCAAGCAGTCATTCTCTG...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTTGGAGTATGTTCTCATaGTTCAGATTGATGTCTGAG +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCWSMFS*FRLMSE
Trigger: CTCAGACATCAATCTGAAGCATGAGAACATACTCCA...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR GCA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTTACCCAGAGAATGACTaGTTGAATGGACATTTCTTA +
Preference number: 4 (lower is better)
Translates to: QKRSARQGMIILQKQVQCYPEND*LNGHFL
Trigger: TAAGAAATGTCCATTCAAGCAGTCATTCTCTGGGTA...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
3UTR CAA 72 bp CAATCAGGAGCCCAGAAAGATGGAACCCATTGGTGTTaGTATAGAAAACTAGAAAATCAAGTCAAGTGTAAT +
Preference number: 4 (lower is better)
Translates to: QSGAQKDGTHWC*YRKLENQVKCN
Trigger: ATTACACTTGACTTGATTTTCTAGTTTTCTATACAAACACCAATGGGTTCCATCTTTCTGGGCTCCTGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS GCA 90 bp ACGTGCGGTGGGATCGTGCTGGCGATACGCGTCCACAGGACGATGTaGAGCGGCCACAGGCCCCTGAGCAGCCCCCGACCCATGGCAGAC +
Preference number: 5 (lower is better)
Translates to: TCGGIVLAIRVHRTM*SGHRPLSSPRPMAD
Trigger: GTCTGCCATGGGTCGGGGGCTGCTCAGGGGCCTGTGGCCGCTGCACATCGTCCTGTGGACGCGTATCGCCAGCACGATCCCACCGCACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS GCA 90 bp GCGAGGGAGCTGCCCAGCTTGCGCAGGTCCTCCCAGCTGATGACATaGCGCGTCAGGTACTCCTGTAGGTTGCCCTTGGCGTGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: ARELPSLRRSSQLMT*RVRYSCRLPLAWKA
Trigger: CGCCTTCCACGCCAAGGGCAACCTACAGGAGTACCTGACGCGGCATGTCATCAGCTGGGAGGACCTGCGCAAGCTGGGCAGCTCCCTCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS GCA 90 bp CCTCCCCGAGAGCCTGTCCAGATGCTCCAGCTCACTGAAGCGTTCTaGCACACACTGGGCTGTGAGACGGGCCTCTGGGTCGTGGTCCCA +
Preference number: 5 (lower is better)
Translates to: PPREPVQMLQLTEAF*HTLGCETGLWVVVP
Trigger: TGGGACCACGACCCAGAGGCCCGTCTCACAGCCCAGTGTGTGGCAGAACGCTTCAGTGAGCTGGAGCATCTGGACAGGCTCTCGGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672050.1
ENST00000672866.1
ENST00000673203.1
CDS GCA 90 bp GGGCCTCCATTTCCACATCCGACTTCTGAACGTGCGGTGGGATCGTaGTGGCGATACGCGTCCACAGGACGATGTGCAGCGGCCACAGGC +
Preference number: 5 (lower is better)
Translates to: GPPFPHPTSERAVGS*WRYASTGRCAAATG
Trigger: GCCTGTGGCCGCTGCACATCGTCCTGTGGACGCGTATCGCCAGCACGATCCCACCGCACGTTCAGAAGTCGGATGTGGAAATGGAGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359013.4
CDS CCA 90 bp GCTCTTGAGGTCCCTGTGCACGATGGGCATCTTGGGCCTCCCACATaGAGTGTGATCACTGTGGAGGTGAGCAATCCCCCGGGCGAGGGA +
Preference number: 5 (lower is better)
Translates to: ALEVPVHDGHLGPPT*SVITVEVSNPPGEG
Trigger: TCCCTCGCCCGGGGGATTGCTCACCTCCACAGTGATCACACTCCATGTGGGAGGCCCAAGATGCCCATCGTGCACAGGGACCTCAAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS CCA 90 bp AGCCTGTCCAGATGCTCCAGCTCACTGAAGCGTTCTGCCACACACTaGGCTGTGAGACGGGCCTCTGGGTCGTGGTCCCAGCACTCAGTC +
Preference number: 5 (lower is better)
Translates to: SLSRCSSSLKRSATH*AVRRASGSWSQHSV
Trigger: GACTGAGTGCTGGGACCACGACCCAGAGGCCCGTCTCACAGCCCAGTGTGTGGCAGAACGCTTCAGTGAGCTGGAGCATCTGGACAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672050.1
ENST00000672866.1
ENST00000673203.1
CDS-3UTR CAA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGAGGGAGCTGCCCAGCTaGCGCAGGTCCTCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVRELPS*RRSSQL
Trigger: CAGCTGGGAGGACCTGCGCAAGCTGGGCAGCTCCCT...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS CCA 90 bp AAGCGTTCTGCCACACACTGGGCTGTGAGACGGGCCTCTGGGTCGTaGTCCCAGCACTCAGTCAACGTCTCACACACCATCTGGATGCCC +
Preference number: 5 (lower is better)
Translates to: KRSATHWAVRRASGS*SQHSVNVSHTIWMP
Trigger: GGGCATCCAGATGGTGTGTGAGACGTTGACTGAGTGCTGGGACCACGACCCAGAGGCCCGTCTCACAGCCCAGTGTGTGGCAGAACGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672050.1
ENST00000672866.1
ENST00000673203.1
CDS TCA 90 bp GCCGCGTCAGGTACTCCTGTAGGTTGCCCTTGGCGTGGAAGGCGGTaGTCAGCCAGTATTGTTTCCCCAACTCCGTCTTCCGCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: AASGTPVGCPWRGRR*SASIVSPTPSSAPQ
Trigger: CTGAGGAGCGGAAGACGGAGTTGGGGAAACAATACTGGCTGATCACCGCCTTCCACGCCAAGGGCAACCTACAGGAGTACCTGACGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS GCA 90 bp GGAATCTTCTCCTCCGAGCAGCTCCTCCCCGAGAGCCTGTCCAGATaGTCCAGCTCACTGAAGCGTTCTGCCACACACTGGGCTGTGAGA +
Preference number: 5 (lower is better)
Translates to: GIFSSEQLLPESLSR*SSSLKRSATHWAVR
Trigger: TCTCACAGCCCAGTGTGTGGCAGAACGCTTCAGTGAGCTGGAGCATCTGGACAGGCTCTCGGGGAGGAGCTGCTCGGAGGAGAAGATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672050.1
ENST00000672866.1
ENST00000673203.1
CDS CCA 90 bp CTCACTGAAGCGTTCTGCCACACACTGGGCTGTGAGACGGGCCTCTaGGTCGTGGTCCCAGCACTCAGTCAACGTCTCACACACCATCTG +
Preference number: 5 (lower is better)
Translates to: LTEAFCHTLGCETGL*VVVPALSQRLTHHL
Trigger: CAGATGGTGTGTGAGACGTTGACTGAGTGCTGGGACCACGACCCAGAGGCCCGTCTCACAGCCCAGTGTGTGGCAGAACGCTTCAGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672050.1
ENST00000672866.1
ENST00000673203.1
CDS-3UTR CAA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGTCCTGTAGGTTGCCCTaGGCGTGGAAGGCGGTGATC +
Preference number: 5 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVSCRLP*AWKAVI
Trigger: GATCACCGCCTTCCACGCCAAGGGCAACCTACAGGA...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS TCA 90 bp ACAGGCAGCAGGTTAGGTCGTTCTTCACGAGGATATTGGAGCTCTTaGGGTCCCTGTGCACGATGGGCATCTTGGGCCTCCCACATGGAG +
Preference number: 5 (lower is better)
Translates to: TGSRLGRSSRGYWSS*GPCARWASWASHME
Trigger: CTCCATGTGGGAGGCCCAAGATGCCCATCGTGCACAGGGACCTCAAGAGCTCCAATATCCTCGTGAAGAACGACCTAACCTGCTGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS CCA 90 bp TTCCCCACCAGGGTGTCCAGCTCAATGGGCAGCAGCTCTGTGTTGTaGTTGATGTTGTTGGCACACGTGGAGCTGATGTCAGAGCGGTCA +
Preference number: 5 (lower is better)
Translates to: FPTRVSSSMGSSSVL*LMLLAHVELMSERS
Trigger: TGACCGCTCTGACATCAGCTCCACGTGTGCCAACAACATCAACCACAACACAGAGCTGCTGCCCATTGAGCTGGACACCCTGGTGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS CCA 90 bp CTGATGACATGCCGCGTCAGGTACTCCTGTAGGTTGCCCTTGGCGTaGAAGGCGGTGATCAGCCAGTATTGTTTCCCCAACTCCGTCTTC +
Preference number: 5 (lower is better)
Translates to: LMTCRVRYSCRLPLA*KAVISQYCFPNSVF
Trigger: GAAGACGGAGTTGGGGAAACAATACTGGCTGATCACCGCCTTCCACGCCAAGGGCAACCTACAGGAGTACCTGACGCGGCATGTCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS-3UTR CAA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGATGAGCTTCCGCGTCTaGCCGGTTTCCCAGGTTGAA +
Preference number: 5 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVMSFRV*PVSQVE
Trigger: TTCAACCTGGGAAACCGGCAAGACGCGGAAGCTCAT...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGAGGGAGCTGCCCAGCTaGCGCAGGTCCTCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRRELPS*RRSSQL
Trigger: CAGCTGGGAGGACCTGCGCAAGCTGGGCAGCTCCCT...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGTGGATGCCCTGGTGGTaGAGCCAGAAGCTGGGAATT +
Preference number: 5 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVWMPWW*SQKLGI
Trigger: AATTCCCAGCTTCTGGCTCAACCACCAGGGCATCCA...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS TCA 90 bp CTCGCTGAACTCCATGAGCTTCCGCGTCTTGCCGGTTTCCCAGGTTaGACTCAGCTTCTGCTGCCGGTTAACGCGGTAGCAGTAGAAGAT +
Preference number: 5 (lower is better)
Translates to: LAELHELPRLAGFPG*TQLLLPVNAVAVED
Trigger: ATCTTCTACTGCTACCGCGTTAACCGGCAGCAGAAGCTGAGTTCAACCTGGGAAACCGGCAAGACGCGGAAGCTCATGGAGTTCAGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS-3UTR CAA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGGGCAGCAGCTCTGTGTaGTGGTTGATGTTGTTGGCA +
Preference number: 5 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVGSSSV*WLMLLA
Trigger: TGCCAACAACATCAACCACAACACAGAGCTGCTGCC...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCTCCTGTAGGTTGCCCTaGGCGTGGAAGGCGGTGATC +
Preference number: 5 (lower is better)
Translates to: SYWDGISMPYGASGISRRSCRLP*AWKAVI
Trigger: GATCACCGCCTTCCACGCCAAGGGCAACCTACAGGA...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCAGGTACTCCTGTAGGTaGCCCTTGGCGTGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: SYWDGISMPYGASGISRRRYSCR*PLAWKA
Trigger: CGCCTTCCACGCCAAGGGCAACCTACAGGAGTACCT...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS TCA 90 bp GCAGGTTGCAGTGGAGAAGGCTCTGAATCGACCATGAGGGGGCTTTaGGTTCAAGGGCAATTACCCAACCACTCTCTGTGCCTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: AGCSGEGSESTMRGL*VQGQLPNHSLCLFS
Trigger: GGAGAACAGGCACAGAGAGTGGTTGGGTAATTGCCCTTGAACTCAAAGCCCCCTCATGGTCGATTCAGAGCCTTCTCCACTGCAACCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672866.1
CDS GCA 90 bp TGGGAATTTCTGGTCGCCCTCGATCTCTCAACACGTTGTCCTTCATaGTTTCGACACAGGGGTGCTCCCGCACCTTGGAACCAAATGGAG +
Preference number: 5 (lower is better)
Translates to: WEFLVALDLSTRCPS*FRHRGAPAPWNQME
Trigger: CTCCATTTGGTTCCAAGGTGCGGGAGCACCCCTGTGTCGAAAGCATGAAGGACAACGTGTTGAGAGATCGAGGGCGACCAGAAATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672050.1
ENST00000672866.1
ENST00000673203.1
CDS CCA 90 bp CACCATCTGGATGCCCTGGTGGTTGAGCCAGAAGCTGGGAATTTCTaGTCGCCCTCGATCTCTCAACACGTTGTCCTTCATGCTTTCGAC +
Preference number: 5 (lower is better)
Translates to: HHLDALVVEPEAGNF*SPSISQHVVLHAFD
Trigger: GTCGAAAGCATGAAGGACAACGTGTTGAGAGATCGAGGGCGACCAGAAATTCCCAGCTTCTGGCTCAACCACCAGGGCATCCAGATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672050.1
ENST00000672866.1
ENST00000673203.1
CDS-3UTR CAA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCTGCTGCCTCTGTTCTTaGGTGAGAGGGGCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: SYWDGISMPYGASGISRRCCLCS*VRGAAS
Trigger: AGAGGCTGCCCCTCTCACCAAAGAACAGAGGCAGCA...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGAATGGGCAACAGCTATaGGGATGGTATCAGCATGCC +
Preference number: 5 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVNGQQL*GWYQHA
Trigger: GGCATGCTGATACCATCCCAATAGCTGTTGCCCATT...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS CCA 90 bp TTCCCAGTTCCACAACCCTCAGAGGGCAGGTCTCTGGGACAGCAATaGTATTCCTCGGAAAGTCAGCATCTGGTGCACAGCTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: FPVPQPSEGRSLGQQ*YSSESQHLVHSCCF
Trigger: AAAACAGCAGCTGTGCACCAGATGCTGACTTTCCGAGGAATACCATTGCTGTCCCAGAGACCTGCCCTCTGAGGGTTGTGGAACTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672050.1
CDS CCA 90 bp ACTTCTGTCTCTTCCCAGTTCCACAACCCTCAGAGGGCAGGTCTCTaGGACAGCAATGGTATTCCTCGGAAAGTCAGCATCTGGTGCACA +
Preference number: 5 (lower is better)
Translates to: TSVSSQFHNPQRAGL*DSNGIPRKVSIWCT
Trigger: TGTGCACCAGATGCTGACTTTCCGAGGAATACCATTGCTGTCCCAGAGACCTGCCCTCTGAGGGTTGTGGAACTGGGAAGAGACAGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672050.1
CDS-3UTR CAA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGTGCACGATGGGCATCTaGGGCCTCCCACATGGAGTG +
Preference number: 5 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRCTMGI*GLPHGV
Trigger: CACTCCATGTGGGAGGCCCAAGATGCCCATCGTGCA...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGGGGTGCTCCCGCACCTaGGAACCAAATGGAGGCTCA +
Preference number: 5 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRGCSRT*EPNGGS
Trigger: TGAGCCTCCATTTGGTTCCAAGGTGCGGGAGCACCC...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGCGATCTCTCAACACGTaGTCCTTCATGCTTTCGACA +
Preference number: 5 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVRSLNT*SFMLST
Trigger: TGTCGAAAGCATGAAGGACAACGTGTTGAGAGATCG...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGCTGCAAATGGGACCTTaGTGTCCCACATTCAAATCC +
Preference number: 5 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVLQMGP*CPTFKS
Trigger: GGATTTGAATGTGGGACACAAAGGTCCCATTTGCAG...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS TCA 90 bp ATTCACCATGCTGGGAATGGCAGCAGGTTGCAGTGGAGAAGGCTCTaGATCGACCATGAGGGGGCTTTGAGTTCAAGGGCAATTACCCAA +
Preference number: 5 (lower is better)
Translates to: IHHAGNGSRLQWRRL*IDHEGALSSRAITQ
Trigger: TTGGGTAATTGCCCTTGAACTCAAAGCCCCCTCATGGTCGATTCAGAGCCTTCTCCACTGCAACCTGCTGCCATTCCCAGCATGGTGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672866.1
CDS-3UTR CAA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGATGCAGGATTTCTGGTaGTCACAGGTGGAAAATCTC +
Preference number: 5 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVMQDFW*SQVENL
Trigger: GAGATTTTCCACCTGTGACAACCAGAAATCCTGCAT...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGGTGTTGTGGTTGATGTaGTTGGCACACGTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: TRGQWATAIGMVSACPTVVLWLM*LAHVEL
Trigger: CAGCTCCACGTGTGCCAACAACATCAACCACAACAC...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp GCTACTGCAGCCACACTGTCTTTAACTCTCAGCCCACCCACACTGAGGAGGGTGTCTGAGAAGATGATGTaGTCATTGCACTCATCAGAG +
Preference number: 5 (lower is better)
Translates to: ATAATLSLTLSPPTLRRVSEKMM*SLHSSE
Trigger: CTCTGATGAGTGCAATGACAACATCATCTTCTCAGA...CACCCTCCTCAGTGTGGGTGGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGATGAGCTTCCGCGTCTaGCCGGTTTCCCAGGTTGAA +
Preference number: 5 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRMSFRV*PVSQVE
Trigger: TTCAACCTGGGAAACCGGCAAGACGCGGAAGCTCAT...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTGGCAGCAGCTCTGTGTaGTGGTTGATGTTGTTGGCA +
Preference number: 5 (lower is better)
Translates to: GNSYWDGISMPYGASGISGSSSV*WLMLLA
Trigger: TGCCAACAACATCAACCACAACACAGAGCTGCTGCC...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGATATTGGAGCTCTaGAGGTCCCTGTGCACGATG +
Preference number: 5 (lower is better)
Translates to: GNSYWDGISMPYGASGISRILEL*RSLCTM
Trigger: CATCGTGCACAGGGACCTCAAGAGCTCCAATATCCT...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCTTCTTCACGAGGATATaGGAGCTCTTGAGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: SYWDGISMPYGASGISRRFFTRI*ELLRSL
Trigger: CAGGGACCTCAAGAGCTCCAATATCCTCGTGAAGAA...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGTGGATGCCCTGGTGGTaGAGCCAGAAGCTGGGAATT +
Preference number: 5 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRWMPWW*SQKLGI
Trigger: AATTCCCAGCTTCTGGCTCAACCACCAGGGCATCCA...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS CCA 90 bp ACACGTTGTCCTTCATGCTTTCGACACAGGGGTGCTCCCGCACCTTaGAACCAAATGGAGGCTCATAATCTTTTACTTCTGTCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: TRCPSCFRHRGAPAP*NQMEAHNLLLLSLP
Trigger: GGGAAGAGACAGAAGTAAAAGATTATGAGCCTCCATTTGGTTCCAAGGTGCGGGAGCACCCCTGTGTCGAAAGCATGAAGGACAACGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672050.1
CDS-3UTR CAA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTTTGTGGTTGATGTTGTaGGCACACGTGGAGCTGATG +
Preference number: 5 (lower is better)
Translates to: GNSYWDGISMPYGASGISLWLML*AHVELM
Trigger: CATCAGCTCCACGTGTGCCAACAACATCAACCACAA...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTGGTGATCAGCCAGTATaGTTTCCCCAACTCCGTCTT +
Preference number: 5 (lower is better)
Translates to: GNSYWDGISMPYGASGISGDQPV*FPQLRL
Trigger: AAGACGGAGTTGGGGAAACAATACTGGCTGATCACC...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGAGGATATTGGAGCTCTaGAGGTCCCTGTGCACGATG +
Preference number: 5 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRRILEL*RSLCTM
Trigger: CATCGTGCACAGGGACCTCAAGAGCTCCAATATCCT...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGCCCCAGAAGAGCTATTaGGTAGTGTTTAGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRPQKSY*VVFREP
Trigger: CGGCTCCCTAAACACTACCAAATAGCTCTTCTGGGG...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCTGCAAATGGGACCTTaGTGTCCCACATTCAAATCC +
Preference number: 5 (lower is better)
Translates to: TRGQWATAIGMVSACPTVLQMGP*CPTFKS
Trigger: GGATTTGAATGTGGGACACAAAGGTCCCATTTGCAG...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAATGGGCAACAGCTATaGGGATGGTATCAGCATGCC +
Preference number: 5 (lower is better)
Translates to: GNSYWDGISMPYGASGISNGQQL*GWYQHA
Trigger: GGCATGCTGATACCATCCCAATAGCTGTTGCCCATT...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS TCA 90 bp CTCCTCATAGGGAAAGATCTTGACTGCCACTGTCTCAAACTGCTCTaGAGTGTTCTGCTTCAGCTTGGCCTTATAGACCTCAGCAAAGCG +
Preference number: 5 (lower is better)
Translates to: LLIGKDLDCHCLKLL*SVLLQLGLIDLSKA
Trigger: CGCTTTGCTGAGGTCTATAAGGCCAAGCTGAAGCAGAACACTTCAGAGCAGTTTGAGACAGTGGCAGTCAAGATCTTTCCCTATGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS GCA 90 bp TCCGTCTTCCGCTCCTCAGCCGTCAGGAACTGGAGTATGTTCTCATaGTTCAGATTGATGTCTGAGAAGATGTCCTTCTCTGTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: SVFRSSAVRNWSMFS*FRLMSEKMSFSVFQ
Trigger: TTGGAAGACAGAGAAGGACATCTTCTCAGACATCAATCTGAAGCATGAGAACATACTCCAGTTCCTGACGGCTGAGGAGCGGAAGACGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS GCA 90 bp GGACAGCAATGGTATTCCTCGGAAAGTCAGCATCTGGTGCACAGCTaGTGTTTTGACTGTAGTCCCAATGTAACAGGGCAGCAAAGTTGT +
Preference number: 5 (lower is better)
Translates to: GQQWYSSESQHLVHS*CFDCSPNVTGQQSC
Trigger: ACAACTTTGCTGCCCTGTTACATTGGGACTACAGTCAAAACAGCAGCTGTGCACCAGATGCTGACTTTCCGAGGAATACCATTGCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672050.1
CDS CCA 90 bp TATTGTTTCCCCAACTCCGTCTTCCGCTCCTCAGCCGTCAGGAACTaGAGTATGTTCTCATGCTTCAGATTGATGTCTGAGAAGATGTCC +
Preference number: 5 (lower is better)
Translates to: YCFPNSVFRSSAVRN*SMFSCFRLMSEKMS
Trigger: GGACATCTTCTCAGACATCAATCTGAAGCATGAGAACATACTCCAGTTCCTGACGGCTGAGGAGCGGAAGACGGAGTTGGGGAAACAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS CCA 90 bp CTTCATGCTTTCGACACAGGGGTGCTCCCGCACCTTGGAACCAAATaGAGGCTCATAATCTTTTACTTCTGTCTCTTCCCAGTTCCACAA +
Preference number: 5 (lower is better)
Translates to: LHAFDTGVLPHLGTK*RLIIFYFCLFPVPQ
Trigger: TTGTGGAACTGGGAAGAGACAGAAGTAAAAGATTATGAGCCTCCATTTGGTTCCAAGGTGCGGGAGCACCCCTGTGTCGAAAGCATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672050.1
CDS-3UTR CAA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGAACTTGACTGCACCGTaGTTGTCAGTGACTATCATG +
Preference number: 5 (lower is better)
Translates to: TRGQWATAIGMVSACPTVNLTAP*LSVTIM
Trigger: CATGATAGTCACTGACAACAACGGTGCAGTCAAGTT...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp AGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGGCGCAACTTGACTGCACCGTaGTTGTCAGTGACTATCATG +
Preference number: 5 (lower is better)
Translates to: SYWDGISMPYGASGISRRNLTAP*LSVTIM
Trigger: CATGATAGTCACTGACAACAACGGTGCAGTCAAGTT...GCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTCACAGTTGTGGAAACTaGACTGCACCGTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: GNSYWDGISMPYGASGISHSCGN*TAPLLS
Trigger: TGACAACAACGGTGCAGTCAAGTTTCCACAACTGTG...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGAGCTCTGTGTTGTGGTaGATGTTGTTGGCACACGTG +
Preference number: 5 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRSSVLW*MLLAHV
Trigger: CACGTGTGCCAACAACATCAACCACAACACAGAGCT...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTTGCACGATGGGCATCTaGGGCCTCCCACATGGAGTG +
Preference number: 5 (lower is better)
Translates to: QKRSARQGMIILQKQVQCCTMGI*GLPHGV
Trigger: CACTCCATGTGGGAGGCCCAAGATGCCCATCGTGCA...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGTTCTTCACGAGGATATaGGAGCTCTTGAGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRFFTRI*ELLRSL
Trigger: CAGGGACCTCAAGAGCTCCAATATCCTCGTGAAGAA...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTGGGTGCTCCCGCACCTaGGAACCAAATGGAGGCTCA +
Preference number: 5 (lower is better)
Translates to: QKRSARQGMIILQKQVQCGCSRT*EPNGGS
Trigger: TGAGCCTCCATTTGGTTCCAAGGTGCGGGAGCACCC...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS TCA 90 bp GCTCCTCAGCCGTCAGGAACTGGAGTATGTTCTCATGCTTCAGATTaGTGTCTGAGAAGATGTCCTTCTCTGTCTTCCAAGAGGCATACT +
Preference number: 5 (lower is better)
Translates to: APQPSGTGVCSHASD*CLRRCPSLSSKRHT
Trigger: AGTATGCCTCTTGGAAGACAGAGAAGGACATCTTCTCAGACATCAATCTGAAGCATGAGAACATACTCCAGTTCCTGACGGCTGAGGAGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS-3UTR CAA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGAAGATGATGTTGTCATaGCACTCATCAGAGCTACAG +
Preference number: 5 (lower is better)
Translates to: TRGQWATAIGMVSACPTVKMMLS*HSSELQ
Trigger: CTGTAGCTCTGATGAGTGCAATGACAACATCATCTT...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGTCTGAGAAGATGATGTaGTCATTGCACTCATCAGAG +
Preference number: 5 (lower is better)
Translates to: TRGQWATAIGMVSACPTVSEKMM*SLHSSE
Trigger: CTCTGATGAGTGCAATGACAACATCATCTTCTCAGA...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTTGCCGGTTTCCCAGGTaGAACTCAGCTTCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: QKRSARQGMIILQKQVQCCRFPR*NSASAA
Trigger: GGCAGCAGAAGCTGAGTTCAACCTGGGAAACCGGCA...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS TCA 90 bp GATATGGCAACTCCCAGTGGTGGCAGGAGGCTGATGCCTGTCACTTaGAATATGACTAGCAACAAGTCAGGATTGCTGGTGTTATATTCT +
Preference number: 5 (lower is better)
Translates to: DMATPSGGRRLMPVT*NMTSNKSGLLVLYS
Trigger: AGAATATAACACCAGCAATCCTGACTTGTTGCTAGTCATATTTCAAGTGACAGGCATCAGCCTCCTGCCACCACTGGGAGTTGCCATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS TCA 90 bp TCATTTCCCAGAGCACCAGAGCCATGGAGTAGACATCGGTCTGCTTaGAGGACTCAACATTCTCCAAATTCATCCTGGATTCTAGGACTT +
Preference number: 5 (lower is better)
Translates to: SFPRAPEPWSRHRSA*RTQHSPNSSWILGL
Trigger: AAGTCCTAGAATCCAGGATGAATTTGGAGAATGTTGAGTCCTTCAAGCAGACCGATGTCTACTCCATGGCTCTGGTGCTCTGGGAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
ENST00000673203.1
CDS-3UTR CAA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGACAAAATTTACACAGTaGTGGAAACTTGACTGCACC +
Preference number: 5 (lower is better)
Translates to: TRGQWATAIGMVSACPTVTKFTQ*WKLDCT
Trigger: GGTGCAGTCAAGTTTCCACAACTGTGTAAATTTTGT...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGATGCAGGATTTCTGGTaGTCACAGGTGGAAAATCTC +
Preference number: 5 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRMQDFW*SQVENL
Trigger: GAGATTTTCCACCTGTGACAACCAGAAATCCTGCAT...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTTTCTCATGCTTCAGATaGATGTCTGAGAAGATGTCC +
Preference number: 5 (lower is better)
Translates to: GNSYWDGISMPYGASGISFSCFR*MSEKMS
Trigger: GGACATCTTCTCAGACATCAATCTGAAGCATGAGAA...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTCAGGCCAAACTGTGCTaGAGCAATCAGGAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: QKRSARQGMIILQKQVQCQAKLC*SNQEPR
Trigger: TCTGGGCTCCTGATTGCTCAAGCACAGTTTGGCCTG...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp ACTAGAGGTCAATGGGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGGCTCATACTTTGTTCTaGTCCTTGTGGACACAAATT +
Preference number: 5 (lower is better)
Translates to: TRGQWATAIGMVSACPTVAHTLF*SLWTQI
Trigger: AATTTGTGTCCACAAGGACAAGAACAAAGTATGAGC...CACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCCCATTGACCTCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS TCA 90 bp AGCCGTCAGGAACTGGAGTATGTTCTCATGCTTCAGATTGATGTCTaGGAAGATGTCCTTCTCTGTCTTCCAAGAGGCATACTCCTCATA +
Preference number: 5 (lower is better)
Translates to: SRQELEYVLMLQIDV*EDVLLCLPRGILLI
Trigger: TATGAGGAGTATGCCTCTTGGAAGACAGAGAAGGACATCTTCTCAGACATCAATCTGAAGCATGAGAACATACTCCAGTTCCTGACGGCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS-3UTR CAA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTACAAAATTTACACAGTaGTGGAAACTTGACTGCACC +
Preference number: 5 (lower is better)
Translates to: GNSYWDGISMPYGASGISTKFTQ*WKLDCT
Trigger: GGTGCAGTCAAGTTTCCACAACTGTGTAAATTTTGT...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp GGCAACAGCTATTGGGATGGTATCAGCATGCCCTACGGTGCAAGTGGAATTTCTAGCAACAAGTCAGGATaGCTGGTGTTATATTCTTCT +
Preference number: 5 (lower is better)
Translates to: GNSYWDGISMPYGASGISSNKSG*LVLYSS
Trigger: AGAAGAATATAACACCAGCAATCCTGACTTGTTGCT...AGAAATTCCACTTGCACCGTAGGGCATGCTGATACCATCCCAATAGCTGTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS CCA 90 bp GGATGGGCAGTCCTATTACAGCTGGGGCAGATGATTTCATCTTTCTaGGCCTCCATTTCCACATCTTCTAAAGTTGTTTTGAGGGTTAAT +
Preference number: 5 (lower is better)
Translates to: GWAVLLQLGQMISSF*ASISTSSKVVLRVN
Trigger: ATTAACCCTCAAAACAACTTTAGAAGATGTGGAAATGGAGGCCCAGAAAGATGAAATCATCTGCCCCAGCTGTAATAGGACTGCCCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673250.1
CDS-3UTR CAA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGAGCAACAAGTCAGGATaGCTGGTGTTATATTCTTCT +
Preference number: 5 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRSNKSG*LVLYSS
Trigger: AGAAGAATATAACACCAGCAATCCTGACTTGTTGCT...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTAGCTCTGTGTTGTGGTaGATGTTGTTGGCACACGTG +
Preference number: 5 (lower is better)
Translates to: QKRSARQGMIILQKQVQCSSVLW*MLLAHV
Trigger: CACGTGTGCCAACAACATCAACCACAACACAGAGCT...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGTTCTTACAAGGGACCTaGGTTAGGTGCAGATTTAAT +
Preference number: 5 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRFLQGT*VRCRFN
Trigger: ATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGAA...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGGCTCATACTTTGTTCTaGTCCTTGTGGACACAAATT +
Preference number: 5 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRAHTLF*SLWTQI
Trigger: AATTTGTGTCCACAAGGACAAGAACAAAGTATGAGC...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp TCTTACAAGGGACCTTGGTTAGGTGCAGATTTAATTCCTAGACTGGGGTCCAGGTTTAAAGCTCATACTTaGTTCTTGTCCTTGTGGACA +
Preference number: 5 (lower is better)
Translates to: SYKGPWLGADLIPRLGSRFKAHT*FLSLWT
Trigger: TGTCCACAAGGACAAGAACAAAGTATGAGCTTTAAA...CCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS CCA 90 bp GCTCACGTAAAAGTTAATTATAAAACATTGCTATATGACTTCTACTaGAGGAGAATTCACCATGCTGGGAATGGCAGCAGGTTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: AHVKVNYKTLLYDFY*RRIHHAGNGSRLQW
Trigger: CCACTGCAACCTGCTGCCATTCCCAGCATGGTGAATTCTCCTCCAGTAGAAGTCATATAGCAATGTTTTATAATTAACTTTTACGTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672866.1
CDS CCA 90 bp TTACCCAACCACTCTCTGTGCCTGTTCTCCAACCAGTCAAACAAATaGGTTGGACATGATGAACTTAAAGGTCCCTTTCATTTTGAAAAA +
Preference number: 5 (lower is better)
Translates to: LPNHSLCLFSNQSNK*VGHDELKGPFHFEK
Trigger: TTTTTCAAAATGAAAGGGACCTTTAAGTTCATCATGTCCAACCCATTTGTTTGACTGGTTGGAGAACAGGCACAGAGAGTGGTTGGGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672866.1
CDS-3UTR CAA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTTTCTCATGCTTCAGATaGATGTCTGAGAAGATGTCC +
Preference number: 5 (lower is better)
Translates to: QKRSARQGMIILQKQVQCFSCFR*MSEKMS
Trigger: GGACATCTTCTCAGACATCAATCTGAAGCATGAGAA...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS-3UTR CAA 90 bp CAGAAGAGAAGTGCTAGGCAGGGAATGATTATTTTGCAAAAGCAAGTGCAATGTTTTAAAGCTCATACTTaGTTCTTGTCCTTGTGGACA +
Preference number: 5 (lower is better)
Translates to: QKRSARQGMIILQKQVQCFKAHT*FLSLWT
Trigger: TGTCCACAAGGACAAGAACAAAGTATGAGCTTTAAA...ACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS CCA 72 bp GCGCCGGGCCGGCAGCGCAGATGTGCGGGCCAGATGTaGCGCCCGCTCGCCAGCCAGGAGGGGGCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: APGRQRRCAGQM*RPLASQEGAWR
Trigger: CCTCCAGGCCCCCTCCTGGCTGGCGAGCGGGCGCCACATCTGGCCCGCACATCTGCGCTGCCGGCCCGGCGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS GCA 72 bp AAGCTGCACAGGAGTCCGGCTCCTGTCCCGAGCGGGTaGACGCGCGGGGGTGTCGTCGCTCCGTGCGCGCGA +
Preference number: 6 (lower is better)
Translates to: KLHRSPAPVPSG*TRGGVVAPCAR
Trigger: TCGCGCGCACGGAGCGACGACACCCCCGCGCGTGCACCCGCTCGGGACAGGAGCCGGACTCCTGTGCAGCTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS GCA 72 bp GGGATCGTGCTGGCGATACGCGTCCACAGGACGATGTaGAGCGGCCACAGGCCCCTGAGCAGCCCCCGACCC +
Preference number: 6 (lower is better)
Translates to: GIVLAIRVHRTM*SGHRPLSSPRP
Trigger: GGGTCGGGGGCTGCTCAGGGGCCTGTGGCCGCTGCACATCGTCCTGTGGACGCGTATCGCCAGCACGATCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295754.10
ENST00000359013.4
CDS GCA 72 bp CTGCCCAGCTTGCGCAGGTCCTCCCAGCTGATGACATaGCGCGTCAGGTACTCCTGTAGGTTGCCCTTGGCG +
Preference number: 6 (lower is better)
Translates to: LPSLRRSSQLMT*RVRYSCRLPLA
Trigger: CGCCAAGGGCAACCTACAGGAGTACCTGACGCGGCATGTCATCAGCTGGGAGGACCTGCGCAAGCTGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS CCA 72 bp CCACATCCGACTTCTGAACGTGCGGTGGGATCGTGCTaGCGATACGCGTCCACAGGACGATGTGCAGCGGCC +
Preference number: 6 (lower is better)
Translates to: PHPTSERAVGSC*RYASTGRCAAA
Trigger: GGCCGCTGCACATCGTCCTGTGGACGCGTATCGCCAGCACGATCCCACCGCACGTTCAGAAGTCGGATGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359013.4
CDS GCA 72 bp GAGCCTGTCCAGATGCTCCAGCTCACTGAAGCGTTCTaGCACACACTGGGCTGTGAGACGGGCCTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: EPVQMLQLTEAF*HTLGCETGLWV
Trigger: GACCCAGAGGCCCGTCTCACAGCCCAGTGTGTGGCAGAACGCTTCAGTGAGCTGGAGCATCTGGACAGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672050.1
ENST00000672866.1
ENST00000673203.1
CDS CCA 72 bp GCCACACACTGGGCTGTGAGACGGGCCTCTGGGTCGTaGTCCCAGCACTCAGTCAACGTCTCACACACCATC +
Preference number: 6 (lower is better)
Translates to: ATHWAVRRASGS*SQHSVNVSHTI
Trigger: GATGGTGTGTGAGACGTTGACTGAGTGCTGGGACCACGACCCAGAGGCCCGTCTCACAGCCCAGTGTGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672050.1
ENST00000672866.1
ENST00000673203.1
CDS CCA 72 bp GCGTTCTGCCACACACTGGGCTGTGAGACGGGCCTCTaGGTCGTGGTCCCAGCACTCAGTCAACGTCTCACA +
Preference number: 6 (lower is better)
Translates to: AFCHTLGCETGL*VVVPALSQRLT
Trigger: TGTGAGACGTTGACTGAGTGCTGGGACCACGACCCAGAGGCCCGTCTCACAGCCCAGTGTGTGGCAGAACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672050.1
ENST00000672866.1
ENST00000673203.1
CDS CCA 72 bp AGATGCTCCAGCTCACTGAAGCGTTCTGCCACACACTaGGCTGTGAGACGGGCCTCTGGGTCGTGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: RCSSSLKRSATH*AVRRASGSWSQ
Trigger: CTGGGACCACGACCCAGAGGCCCGTCTCACAGCCCAGTGTGTGGCAGAACGCTTCAGTGAGCTGGAGCATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672050.1
ENST00000672866.1
ENST00000673203.1
CDS CCA 72 bp GTCCCTGTGCACGATGGGCATCTTGGGCCTCCCACATaGAGTGTGATCACTGTGGAGGTGAGCAATCCCCCG +
Preference number: 6 (lower is better)
Translates to: VPVHDGHLGPPT*SVITVEVSNPP
Trigger: CGGGGGATTGCTCACCTCCACAGTGATCACACTCCATGTGGGAGGCCCAAGATGCCCATCGTGCACAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS GCA 72 bp TTTCCACATCCGACTTCTGAACGTGCGGTGGGATCGTaGTGGCGATACGCGTCCACAGGACGATGTGCAGCG +
Preference number: 6 (lower is better)
Translates to: FPHPTSERAVGS*WRYASTGRCAA
Trigger: CGCTGCACATCGTCCTGTGGACGCGTATCGCCAGCACGATCCCACCGCACGTTCAGAAGTCGGATGTGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359013.4
CDS CCA 72 bp GGCCTCCATTTCCACATCCGACTTCTGAACGTGCGGTaGGATCGTGCTGGCGATACGCGTCCACAGGACGAT +
Preference number: 6 (lower is better)
Translates to: GLHFHIRLLNVR*DRAGDTRPQDD
Trigger: ATCGTCCTGTGGACGCGTATCGCCAGCACGATCCCACCGCACGTTCAGAAGTCGGATGTGGAAATGGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359013.4
CDS CAA 72 bp GTTGCCCTTGGCGTGGAAGGCGGTGATCAGCCAGTATaGTTTCCCCAACTCCGTCTTCCGCTCCTCAGCCGT +
Preference number: 6 (lower is better)
Translates to: VALGVEGGDQPV*FPQLRLPLLSR
Trigger: ACGGCTGAGGAGCGGAAGACGGAGTTGGGGAAACAATACTGGCTGATCACCGCCTTCCACGCCAAGGGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS CAA 90 bp AGGTCCTCCCAGCTGATGACATGCCGCGTCAGGTACTCCTGTAGGTaGCCCTTGGCGTGGAAGGCGGTGATCAGCCAGTATTGTTTCCCC +
Preference number: 6 (lower is better)
Translates to: RSSQLMTCRVRYSCR*PLAWKAVISQYCFP
Trigger: GGGGAAACAATACTGGCTGATCACCGCCTTCCACGCCAAGGGCAACCTACAGGAGTACCTGACGCGGCATGTCATCAGCTGGGAGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS CAA 90 bp CCTTTCCCCACCAGGGTGTCCAGCTCAATGGGCAGCAGCTCTGTGTaGTGGTTGATGTTGTTGGCACACGTGGAGCTGATGTCAGAGCGG +
Preference number: 6 (lower is better)
Translates to: PFPTRVSSSMGSSSV*WLMLLAHVELMSER
Trigger: CCGCTCTGACATCAGCTCCACGTGTGCCAACAACATCAACCACAACACAGAGCTGCTGCCCATTGAGCTGGACACCCTGGTGGGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS CAA 90 bp TCCCAGCTGATGACATGCCGCGTCAGGTACTCCTGTAGGTTGCCCTaGGCGTGGAAGGCGGTGATCAGCCAGTATTGTTTCCCCAACTCC +
Preference number: 6 (lower is better)
Translates to: SQLMTCRVRYSCRLP*AWKAVISQYCFPNS
Trigger: GGAGTTGGGGAAACAATACTGGCTGATCACCGCCTTCCACGCCAAGGGCAACCTACAGGAGTACCTGACGCGGCATGTCATCAGCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS TCA 72 bp CTCCATGAGCTTCCGCGTCTTGCCGGTTTCCCAGGTTaGACTCAGCTTCTGCTGCCGGTTAACGCGGTAGCA +
Preference number: 6 (lower is better)
Translates to: LHELPRLAGFPG*TQLLLPVNAVA
Trigger: TGCTACCGCGTTAACCGGCAGCAGAAGCTGAGTTCAACCTGGGAAACCGGCAAGACGCGGAAGCTCATGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS GCA 72 bp CTGGTCGCCCTCGATCTCTCAACACGTTGTCCTTCATaGTTTCGACACAGGGGTGCTCCCGCACCTTGGAAC +
Preference number: 6 (lower is better)
Translates to: LVALDLSTRCPS*FRHRGAPAPWN
Trigger: GTTCCAAGGTGCGGGAGCACCCCTGTGTCGAAAGCATGAAGGACAACGTGTTGAGAGATCGAGGGCGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672050.1
ENST00000672866.1
ENST00000673203.1
CDS CCA 72 bp TGCCGCGTCAGGTACTCCTGTAGGTTGCCCTTGGCGTaGAAGGCGGTGATCAGCCAGTATTGTTTCCCCAAC +
Preference number: 6 (lower is better)
Translates to: CRVRYSCRLPLA*KAVISQYCFPN
Trigger: GTTGGGGAAACAATACTGGCTGATCACCGCCTTCCACGCCAAGGGCAACCTACAGGAGTACCTGACGCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS CAA 72 bp CAGCTGATGACATGCCGCGTCAGGTACTCCTGTAGGTaGCCCTTGGCGTGGAAGGCGGTGATCAGCCAGTAT +
Preference number: 6 (lower is better)
Translates to: QLMTCRVRYSCR*PLAWKAVISQY
Trigger: ATACTGGCTGATCACCGCCTTCCACGCCAAGGGCAACCTACAGGAGTACCTGACGCGGCATGTCATCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS CAA 90 bp CCCACCAGGGTGTCCAGCTCAATGGGCAGCAGCTCTGTGTTGTGGTaGATGTTGTTGGCACACGTGGAGCTGATGTCAGAGCGGTCATCT +
Preference number: 6 (lower is better)
Translates to: PTRVSSSMGSSSVLW*MLLAHVELMSERSS
Trigger: AGATGACCGCTCTGACATCAGCTCCACGTGTGCCAACAACATCAACCACAACACAGAGCTGCTGCCCATTGAGCTGGACACCCTGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS CAA 90 bp GGGCAGCCTCTTTGGACATGGCCCAGCCTGCCCCAGAAGAGCTATTaGGTAGTGTTTAGGGAGCCGTCTTCAGGAATCTTCTCCTCCGAG +
Preference number: 6 (lower is better)
Translates to: GQPLWTWPSLPQKSY*VVFREPSSGIFSSE
Trigger: CTCGGAGGAGAAGATTCCTGAAGACGGCTCCCTAAACACTACCAAATAGCTCTTCTGGGGCAGGCTGGGCCATGTCCAAAGAGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672050.1
ENST00000672866.1
ENST00000673203.1
CDS TCA 72 bp GGTACTCCTGTAGGTTGCCCTTGGCGTGGAAGGCGGTaGTCAGCCAGTATTGTTTCCCCAACTCCGTCTTCC +
Preference number: 6 (lower is better)
Translates to: GTPVGCPWRGRR*SASIVSPTPSS
Trigger: GGAAGACGGAGTTGGGGAAACAATACTGGCTGATCACCGCCTTCCACGCCAAGGGCAACCTACAGGAGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS TCA 72 bp GCTGGGAATGGCAGCAGGTTGCAGTGGAGAAGGCTCTaGATCGACCATGAGGGGGCTTTGAGTTCAAGGGCA +
Preference number: 6 (lower is better)
Translates to: AGNGSRLQWRRL*IDHEGALSSRA
Trigger: TGCCCTTGAACTCAAAGCCCCCTCATGGTCGATTCAGAGCCTTCTCCACTGCAACCTGCTGCCATTCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672866.1
CDS GCA 72 bp GGAGGAGAATTCACCATGCTGGGAATGGCAGCAGGTTaGAGTGGAGAAGGCTCTGAATCGACCATGAGGGGG +
Preference number: 6 (lower is better)
Translates to: GGEFTMLGMAAG*SGEGSESTMRG
Trigger: CCCCCTCATGGTCGATTCAGAGCCTTCTCCACTGCAACCTGCTGCCATTCCCAGCATGGTGAATTCTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672866.1
CDS CAA 72 bp CTGGGAATTTCTGGTCGCCCTCGATCTCTCAACACGTaGTCCTTCATGCTTTCGACACAGGGGTGCTCCCGC +
Preference number: 6 (lower is better)
Translates to: LGISGRPRSLNT*SFMLSTQGCSR
Trigger: GCGGGAGCACCCCTGTGTCGAAAGCATGAAGGACAACGTGTTGAGAGATCGAGGGCGACCAGAAATTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672050.1
ENST00000672866.1
ENST00000673203.1
CDS CAA 90 bp AGGGTGTCCAGCTCAATGGGCAGCAGCTCTGTGTTGTGGTTGATGTaGTTGGCACACGTGGAGCTGATGTCAGAGCGGTCATCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: RVSSSMGSSSVLWLM*LAHVELMSERSSSR
Trigger: CCTGGAAGATGACCGCTCTGACATCAGCTCCACGTGTGCCAACAACATCAACCACAACACAGAGCTGCTGCCCATTGAGCTGGACACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS CAA 90 bp CCAAAGTCACACAGGCAGCAGGTTAGGTCGTTCTTCACGAGGATATaGGAGCTCTTGAGGTCCCTGTGCACGATGGGCATCTTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: PKSHRQQVRSFFTRI*ELLRSLCTMGILGL
Trigger: GAGGCCCAAGATGCCCATCGTGCACAGGGACCTCAAGAGCTCCAATATCCTCGTGAAGAACGACCTAACCTGCTGCCTGTGTGACTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS CAA 90 bp AGCCAGAAGCTGGGAATTTCTGGTCGCCCTCGATCTCTCAACACGTaGTCCTTCATGCTTTCGACACAGGGGTGCTCCCGCACCTTGGAA +
Preference number: 6 (lower is better)
Translates to: SQKLGISGRPRSLNT*SFMLSTQGCSRTLE
Trigger: TTCCAAGGTGCGGGAGCACCCCTGTGTCGAAAGCATGAAGGACAACGTGTTGAGAGATCGAGGGCGACCAGAAATTCCCAGCTTCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672050.1
ENST00000672866.1
ENST00000673203.1
CDS TCA 72 bp AGGTTAGGTCGTTCTTCACGAGGATATTGGAGCTCTTaGGGTCCCTGTGCACGATGGGCATCTTGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: RLGRSSRGYWSS*GPCARWASWAS
Trigger: GGAGGCCCAAGATGCCCATCGTGCACAGGGACCTCAAGAGCTCCAATATCCTCGTGAAGAACGACCTAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS GCA 72 bp TTCTTCACGAGGATATTGGAGCTCTTGAGGTCCCTGTaGACGATGGGCATCTTGGGCCTCCCACATGGAGTG +
Preference number: 6 (lower is better)
Translates to: FFTRILELLRSL*TMGILGLPHGV
Trigger: CACTCCATGTGGGAGGCCCAAGATGCCCATCGTGCACAGGGACCTCAAGAGCTCCAATATCCTCGTGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS CAA 72 bp ATGACATGCCGCGTCAGGTACTCCTGTAGGTTGCCCTaGGCGTGGAAGGCGGTGATCAGCCAGTATTGTTTC +
Preference number: 6 (lower is better)
Translates to: MTCRVRYSCRLP*AWKAVISQYCF
Trigger: GAAACAATACTGGCTGATCACCGCCTTCCACGCCAAGGGCAACCTACAGGAGTACCTGACGCGGCATGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS CAA 72 bp CACAGGCAGCAGGTTAGGTCGTTCTTCACGAGGATATaGGAGCTCTTGAGGTCCCTGTGCACGATGGGCATC +
Preference number: 6 (lower is better)
Translates to: HRQQVRSFFTRI*ELLRSLCTMGI
Trigger: GATGCCCATCGTGCACAGGGACCTCAAGAGCTCCAATATCCTCGTGAAGAACGACCTAACCTGCTGCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS CAA 90 bp GTGTCCAGCTCAATGGGCAGCAGCTCTGTGTTGTGGTTGATGTTGTaGGCACACGTGGAGCTGATGTCAGAGCGGTCATCTTCCAGGATG +
Preference number: 6 (lower is better)
Translates to: VSSSMGSSSVLWLML*AHVELMSERSSSRM
Trigger: CATCCTGGAAGATGACCGCTCTGACATCAGCTCCACGTGTGCCAACAACATCAACCACAACACAGAGCTGCTGCCCATTGAGCTGGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS CCA 72 bp AGGGTGTCCAGCTCAATGGGCAGCAGCTCTGTGTTGTaGTTGATGTTGTTGGCACACGTGGAGCTGATGTCA +
Preference number: 6 (lower is better)
Translates to: RVSSSMGSSSVL*LMLLAHVELMS
Trigger: TGACATCAGCTCCACGTGTGCCAACAACATCAACCACAACACAGAGCTGCTGCCCATTGAGCTGGACACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS CCA 72 bp GATGCCCTGGTGGTTGAGCCAGAAGCTGGGAATTTCTaGTCGCCCTCGATCTCTCAACACGTTGTCCTTCAT +
Preference number: 6 (lower is better)
Translates to: DALVVEPEAGNF*SPSISQHVVLH
Trigger: ATGAAGGACAACGTGTTGAGAGATCGAGGGCGACCAGAAATTCCCAGCTTCTGGCTCAACCACCAGGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672050.1
ENST00000672866.1
ENST00000673203.1
CDS CAA 72 bp GTGTCCAGCTCAATGGGCAGCAGCTCTGTGTTGTGGTaGATGTTGTTGGCACACGTGGAGCTGATGTCAGAG +
Preference number: 6 (lower is better)
Translates to: VSSSMGSSSVLW*MLLAHVELMSE
Trigger: CTCTGACATCAGCTCCACGTGTGCCAACAACATCAACCACAACACAGAGCTGCTGCCCATTGAGCTGGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS TCA 72 bp AGTGGAGAAGGCTCTGAATCGACCATGAGGGGGCTTTaGGTTCAAGGGCAATTACCCAACCACTCTCTGTGC +
Preference number: 6 (lower is better)
Translates to: SGEGSESTMRGL*VQGQLPNHSLC
Trigger: GCACAGAGAGTGGTTGGGTAATTGCCCTTGAACTCAAAGCCCCCTCATGGTCGATTCAGAGCCTTCTCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672866.1
CDS CCA 72 bp TATCATGTCGTTATTAACCGACTTCTGAACGTGCGGTaGGATCGTGCTGGCGATACGCGTCCACAGGACGAT +
Preference number: 6 (lower is better)
Translates to: YHVVINRLLNVR*DRAGDTRPQDD
Trigger: ATCGTCCTGTGGACGCGTATCGCCAGCACGATCCCACCGCACGTTCAGAAGTCGGTTAATAACGACATGATA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295754.10
CDS CCA 72 bp CCCAACTCCGTCTTCCGCTCCTCAGCCGTCAGGAACTaGAGTATGTTCTCATGCTTCAGATTGATGTCTGAG +
Preference number: 6 (lower is better)
Translates to: PNSVFRSSAVRN*SMFSCFRLMSE
Trigger: CTCAGACATCAATCTGAAGCATGAGAACATACTCCAGTTCCTGACGGCTGAGGAGCGGAAGACGGAGTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS CAA 72 bp TCAATGGGCAGCAGCTCTGTGTTGTGGTTGATGTTGTaGGCACACGTGGAGCTGATGTCAGAGCGGTCATCT +
Preference number: 6 (lower is better)
Translates to: SMGSSSVLWLML*AHVELMSERSS
Trigger: AGATGACCGCTCTGACATCAGCTCCACGTGTGCCAACAACATCAACCACAACACAGAGCTGCTGCCCATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS GCA 72 bp TGGTATTCCTCGGAAAGTCAGCATCTGGTGCACAGCTaGTGTTTTGACTGTAGTCCCAATGTAACAGGGCAG +
Preference number: 6 (lower is better)
Translates to: WYSSESQHLVHS*CFDCSPNVTGQ
Trigger: CTGCCCTGTTACATTGGGACTACAGTCAAAACAGCAGCTGTGCACCAGATGCTGACTTTCCGAGGAATACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672050.1
CDS CCA 72 bp CCTTCATGCTTTCGACACAGGGGTGCTCCCGCACCTTaGAACCAAATGGAGGCTCATAATCTTTTACTTCTC +
Preference number: 6 (lower is better)
Translates to: PSCFRHRGAPAP*NQMEAHNLLLL
Trigger: GAGAAGTAAAAGATTATGAGCCTCCATTTGGTTCCAAGGTGCGGGAGCACCCCTGTGTCGAAAGCATGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
ENST00000673203.1
CDS CCA 72 bp TCCCTTGAAATCCAGGAAAATGAAGCGTTTCAATCCTaGTCTCTCCTCAGCCGTCTCTCCAACGCCTCCTTT +
Preference number: 6 (lower is better)
Translates to: SLEIQENEAFQS*SLLSRLSNASF
Trigger: AAAGGAGGCGTTGGAGAGACGGCTGAGGAGAGACCAGGATTGAAACGCTTCATTTTCCTGGATTTCAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672050.1
CDS CCA 72 bp TTCGACACAGGGGTGCTCCCGCACCTTGGAACCAAATaGAGGCTCATAATCTTTTACTTCTGTCTCTTCCCA +
Preference number: 6 (lower is better)
Translates to: FDTGVLPHLGTK*RLIIFYFCLFP
Trigger: TGGGAAGAGACAGAAGTAAAAGATTATGAGCCTCCATTTGGTTCCAAGGTGCGGGAGCACCCCTGTGTCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672050.1
CDS CCA 72 bp CCTTCATGCTTTCGACACAGGGGTGCTCCCGCACCTTaGAACCAAATGGAGGCTCATAATCTTTTACTTCTG +
Preference number: 6 (lower is better)
Translates to: PSCFRHRGAPAP*NQMEAHNLLLL
Trigger: CAGAAGTAAAAGATTATGAGCCTCCATTTGGTTCCAAGGTGCGGGAGCACCCCTGTGTCGAAAGCATGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672050.1
CDS CAA 90 bp CGCTCCTCAGCCGTCAGGAACTGGAGTATGTTCTCATGCTTCAGATaGATGTCTGAGAAGATGTCCTTCTCTGTCTTCCAAGAGGCATAC +
Preference number: 6 (lower is better)
Translates to: RSSAVRNWSMFSCFR*MSEKMSFSVFQEAY
Trigger: GTATGCCTCTTGGAAGACAGAGAAGGACATCTTCTCAGACATCAATCTGAAGCATGAGAACATACTCCAGTTCCTGACGGCTGAGGAGCG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS GCA 72 bp CGCTCCTCAGCCGTCAGGAACTGGAGTATGTTCTCATaGTTCAGATTGATGTCTGAGAAGATGTCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: RSSAVRNWSMFS*FRLMSEKMSFS
Trigger: AGAGAAGGACATCTTCTCAGACATCAATCTGAAGCATGAGAACATACTCCAGTTCCTGACGGCTGAGGAGCG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS CCA 72 bp GAAGATGATGATGACAGATATGGCAACTCCCAGTGGTaGCAGGAGGCTGATGCCTGTCACTTGAAATATGAC +
Preference number: 6 (lower is better)
Translates to: EDDDDRYGNSQW*QEADACHLKYD
Trigger: GTCATATTTCAAGTGACAGGCATCAGCCTCCTGCCACCACTGGGAGTTGCCATATCTGTCATCATCATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS TCA 72 bp AGAGCACCAGAGCCATGGAGTAGACATCGGTCTGCTTaGAGGACTCAACATTCTCCAAATTCATCCTGGATT +
Preference number: 6 (lower is better)
Translates to: RAPEPWSRHRSA*RTQHSPNSSWI
Trigger: AATCCAGGATGAATTTGGAGAATGTTGAGTCCTTCAAGCAGACCGATGTCTACTCCATGGCTCTGGTGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
ENST00000673203.1
CDS CAA 90 bp TCTCCAAATTCATCCTGGATTCTAGGACTTCTGGAGCCATGTATCTaGCAGTTCCCACCTATAGCAAAAACAGACAGTGAGGCCCATCAT +
Preference number: 6 (lower is better)
Translates to: SPNSSWILGLLEPCI*QFPPIAKTDSEAHH
Trigger: ATGATGGGCCTCACTGTCTGTTTTTGCTATAGGTGGGAACTGCAAGATACATGGCTCCAGAAGTCCTAGAATCCAGGATGAATTTGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673203.1
CDS TCA 72 bp CCGTCAGGAACTGGAGTATGTTCTCATGCTTCAGATTaGTGTCTGAGAAGATGTCCTTCTCTGTCTTCCAAG +
Preference number: 6 (lower is better)
Translates to: PSGTGVCSHASD*CLRRCPSLSSK
Trigger: CTTGGAAGACAGAGAAGGACATCTTCTCAGACATCAATCTGAAGCATGAGAACATACTCCAGTTCCTGACGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
CDS CCA 72 bp ATGGAGGTGATGCTGCAGTTGCTCATGCAGGATTTCTaGTTGTCACAGGTGGAAAATCTCACATCACAAAAT +
Preference number: 6 (lower is better)
Translates to: MEVMLQLLMQDF*LSQVENLTSQN
Trigger: ATTTTGTGATGTGAGATTTTCCACCTGTGACAACCAGAAATCCTGCATGAGCAACTGCAGCATCACCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295754.10
ENST00000359013.4
ENST00000672866.1
ENST00000673250.1
CDS CAA 72 bp TTCTGGGCCTCCATTTCCACATCTTCTAAAGTTGTTTaGAGGGTTAATACACCTGAAGTACTCAGCATGATC +
Preference number: 6 (lower is better)
Translates to: FWASISTSSKVV*RVNTPEVLSMI
Trigger: GATCATGCTGAGTACTTCAGGTGTATTAACCCTCAAAACAACTTTAGAAGATGTGGAAATGGAGGCCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673250.1
CDS CAA 90 bp ATTTCATCTTTCTGGGCCTCCATTTCCACATCTTCTAAAGTTGTTTaGAGGGTTAATACACCTGAAGTACTCAGCATGATCCGTGCAGTA +
Preference number: 6 (lower is better)
Translates to: ISSFWASISTSSKVV*RVNTPEVLSMIRAV
Trigger: TACTGCACGGATCATGCTGAGTACTTCAGGTGTATTAACCCTCAAAACAACTTTAGAAGATGTGGAAATGGAGGCCCAGAAAGATGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673250.1
CDS TCA 72 bp TATCTTGCAGTTCCCACCTATAGCAAAAACAGACAGTaGGGCCCATCATTTAATTCCAGCTGCCTTTTTATT +
Preference number: 6 (lower is better)
Translates to: YLAVPTYSKNRQ*GPSFNSSCLFI
Trigger: AATAAAAAGGCAGCTGGAATTAAATGATGGGCCTCACTGTCTGTTTTTGCTATAGGTGGGAACTGCAAGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673203.1
CDS CAA 72 bp CAAAATTTACACAGTTGTGGAAACTTGACTGCACCGTaGTTGTCAGTGACTATCATGTCGTTATTAACCGAC +
Preference number: 6 (lower is better)
Translates to: QNLHSCGNLTAP*LSVTIMSLLTD
Trigger: GTCGGTTAATAACGACATGATAGTCACTGACAACAACGGTGCAGTCAAGTTTCCACAACTGTGTAAATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295754.10
CDS CAA 90 bp CTCACATCACAAAATTTACACAGTTGTGGAAACTTGACTGCACCGTaGTTGTCAGTGACTATCATGTCGTTATTAATATGTCTCAGTGGA +
Preference number: 6 (lower is better)
Translates to: LTSQNLHSCGNLTAP*LSVTIMSLLICLSG
Trigger: TCCACTGAGACATATTAATAACGACATGATAGTCACTGACAACAACGGTGCAGTCAAGTTTCCACAACTGTGTAAATTTTGTGATGTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359013.4
ENST00000673250.1
CDS CCA 72 bp AAAGTTAATTATAAAACATTGCTATATGACTTCTACTaGAGGAGAATTCACCATGCTGGGAATGGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: KVNYKTLLYDFY*RRIHHAGNGSR
Trigger: CCTGCTGCCATTCCCAGCATGGTGAATTCTCCTCCAGTAGAAGTCATATAGCAATGTTTTATAATTAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672866.1
CDS CAA 90 bp CTCACATCACAAAATTTACACAGTTGTGGAAACTTGACTGCACCGTaGTTGTCAGTGACTATCATGTCGTTATTAAATGTATTAGCTGTG +
Preference number: 6 (lower is better)
Translates to: LTSQNLHSCGNLTAP*LSVTIMSLLNVLAV
Trigger: CACAGCTAATACATTTAATAACGACATGATAGTCACTGACAACAACGGTGCAGTCAAGTTTCCACAACTGTGTAAATTTTGTGATGTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672866.1
CDS CAA 90 bp ACACTTAGTGTGTTATTTCGCAACATGCTAATAAAATTAGTAAGTTaGACATGCAGAGATGGGAAGGCAATGATGTGTCTTAAGATTGTG +
Preference number: 6 (lower is better)
Translates to: TLSVLFRNMLIKLVS*TCRDGKAMMCLKIV
Trigger: CACAATCTTAAGACACATCATTGCCTTCCCATCTCTGCATGTCAAACTTACTAATTTTATTAGCATGTTGCGAAATAACACACTAAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672866.1
CDS CAA 72 bp CAAAATTTACACAGTTGTGGAAACTTGACTGCACCGTaGTTGTCAGTGACTATCATGTCGTTATTAATATGT +
Preference number: 6 (lower is better)
Translates to: QNLHSCGNLTAP*LSVTIMSLLIC
Trigger: ACATATTAATAACGACATGATAGTCACTGACAACAACGGTGCAGTCAAGTTTCCACAACTGTGTAAATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359013.4
ENST00000673250.1
CDS CAA 72 bp CAAAATTTACACAGTTGTGGAAACTTGACTGCACCGTaGTTGTCAGTGACTATCATGTCGTTATTAAATGTA +
Preference number: 6 (lower is better)
Translates to: QNLHSCGNLTAP*LSVTIMSLLNV
Trigger: TACATTTAATAACGACATGATAGTCACTGACAACAACGGTGCAGTCAAGTTTCCACAACTGTGTAAATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672866.1