Pregenerated sensors for TGFA-IT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000224606

Ensembl transcript IDs: ENST00000441238.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TTGAGGAACAGGCCCAGTCACTGGCTAACAGTAGACGCTGGATGCTaGATTGAGACAGGAAGGGTCTGCTGTAGTTTGCATAACTGGCTT	+
Preference number: 5 (lower is better) Translates to: LRNRPSHWLTVDAGC*IETGRVCCSLHNWL Trigger: AAGCCAGTTATGCAAACTACAGCAGACCCTTCCTGTCTCAATTCAGCATCCAGCGTCTACTGTTAGCCAGTGACTGGGCCTGTTCCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441238.1
CDS GCA 90 bp	CTCCATCGATATAGTCTCCACTGCTTCTTTCAACAGGTCCTCTTATaGTTCTATTTTGGGTATTTCAGGAGTGAGTCTTGCCCACTTAGT	+
Preference number: 5 (lower is better) Translates to: LHRYSLHCFFQQVLL*FYFGYFRSESCPLS Trigger: ACTAAGTGGGCAAGACTCACTCCTGAAATACCCAAAATAGAAGCATAAGAGGACCTGTTGAAAGAAGCAGTGGAGACTATATCGATGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441238.1
CDS GCA 90 bp	TGGTATGTAGCTATTTCAAGACAGCTCCATCGATATAGTCTCCACTaGTTCTTTCAACAGGTCCTCTTATGCTTCTATTTTGGGTATTTC	+
Preference number: 5 (lower is better) Translates to: WYVAISRQLHRYSLH*FFQQVLLCFYFGYF Trigger: GAAATACCCAAAATAGAAGCATAAGAGGACCTGTTGAAAGAAGCAGTGGAGACTATATCGATGGAGCTGTCTTGAAATAGCTACATACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441238.1
CDS CCA 72 bp	CTGGAGCTCTTGCTCTCTGCATGTGCTTGGCTTGAGTaGTTGAGGAACAGGCCCAGTCACTGGCTAACAGTA	+
Preference number: 6 (lower is better) Translates to: LELLLSACAWLE*LRNRPSHWLTV Trigger: TACTGTTAGCCAGTGACTGGGCCTGTTCCTCAACCACTCAAGCCAAGCACATGCAGAGAGCAAGAGCTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441238.1
CDS TCA 72 bp	AGGCCCAGTCACTGGCTAACAGTAGACGCTGGATGCTaGATTGAGACAGGAAGGGTCTGCTGTAGTTTGCAT	+
Preference number: 6 (lower is better) Translates to: RPSHWLTVDAGC*IETGRVCCSLH Trigger: ATGCAAACTACAGCAGACCCTTCCTGTCTCAATTCAGCATCCAGCGTCTACTGTTAGCCAGTGACTGGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441238.1
CDS GCA 72 bp	GCTATTTCAAGACAGCTCCATCGATATAGTCTCCACTaGTTCTTTCAACAGGTCCTCTTATGCTTCTATTTT	+
Preference number: 6 (lower is better) Translates to: AISRQLHRYSLH*FFQQVLLCFYF Trigger: AAAATAGAAGCATAAGAGGACCTGTTGAAAGAAGCAGTGGAGACTATATCGATGGAGCTGTCTTGAAATAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441238.1

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