Pregenerated sensors for TFF3 (Homo sapiens)
Ensembl gene IDs: ENSG00000160180Ensembl transcript IDs: ENST00000398431.2, ENST00000489676.1, ENST00000518498.2, ENST00000518498.3
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTTGCCGGGAGCAAAGGGACAGAAAAGCTGAGATGAACAGTGCCTaGCAGCAATCACAGCCGGGCAAGGGTGCTCCGAGCCTCGCATCC | + |
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Preference number: 1 (lower is better) Translates to: ACREQRDRKAEMNSA*QQSQPGKGAPSLAS Trigger: GGATGCGAGGCTCGGAGCACCCTTGCCCGGCTGTGATTGCTGCCAGGCACTGTTCATCTCAGCTTTTCTGTCCCTTTGCTCCCGGCAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR TCA 90 bp | AACTTTCAGCAGAAGCGCTTGCCGGGAGCAAAGGGACAGAAAAGCTaGGATGAACAGTGCCTGGCAGCAATCACAGCCGGGCAAGGGTGC | + |
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Preference number: 1 (lower is better) Translates to: NFQQKRLPGAKGQKS*DEQCLAAITAGQGC Trigger: GCACCCTTGCCCGGCTGTGATTGCTGCCAGGCACTGTTCATCTCAGCTTTTCTGTCCCTTTGCTCCCGGCAAGCGCTTCTGCTGAAAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR GCA 90 bp | TGTGACGTGGGTGCCAGTCTGGATTCAAAATATCCTTGCATGCACTaGAGCTCCTTAGGGAGTCTTTTCCTGCCCTTGAGGCCTGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: CDVGASLDSKYPCMH*SSLGSLFLPLRPGQ Trigger: CTGCCCAGGCCTCAAGGGCAGGAAAAGACTCCCTAAGGAGCTGCAGTGCATGCAAGGATATTTTGAATCCAGACTGGCACCCACGTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR CCA 90 bp | CCCGAGGAAGCGGCACTTACAGTGTTCCTAGGCTTTCCTGTGACGTaGGTGCCAGTCTGGATTCAAAATATCCTTGCATGCACTGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: PEEAALTVFLGFPVT*VPVWIQNILACTAA Trigger: AGCTGCAGTGCATGCAAGGATATTTTGAATCCAGACTGGCACCCACGTCACAGGAAAGCCTAGGAACACTGTAAGTGCCGCTTCCTCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR GCA 90 bp | AGGCTTTCCTGTGACGTGGGTGCCAGTCTGGATTCAAAATATCCTTaGATGCACTGCAGCTCCTTAGGGAGTCTTTTCCTGCCCTTGAGG | + |
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Preference number: 1 (lower is better) Translates to: RLSCDVGASLDSKYP*MHCSSLGSLFLPLR Trigger: CCTCAAGGGCAGGAAAAGACTCCCTAAGGAGCTGCAGTGCATGCAAGGATATTTTGAATCCAGACTGGCACCCACGTCACAGGAAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR CCA 90 bp | AAGCACAACCTCAGAAAGTCTCAGGCACGAAGAACTGTCCTCGGGTaGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATAT | + |
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Preference number: 1 (lower is better) Translates to: KHNLRKSQARRTVLG*SMGPLFVKTSGSRY Trigger: ATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGAGGACAGTTCTTCGTGCCTGAGACTTTCTGAGGTTGTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR CCA 90 bp | ACCTCAGAAAGTCTCAGGCACGAAGAACTGTCCTCGGGTGGAGCATaGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAACTTT | + |
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Preference number: 1 (lower is better) Translates to: TSESLRHEELSSGGA*DLYSLRHQAPDMNF Trigger: AAAGTTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGAGGACAGTTCTTCGTGCCTGAGACTTTCTGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR-3UTR GCA 90 bp | CGAGGAAGCGGCACTTACAGTGTTCCTAGGCTTTCCTGTGACGTGGGTGCCAGTACAGCCGGGCAAGGGTaGTCCGAGCCTCGCATCCCC | + |
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Preference number: 2 (lower is better) Translates to: RGSGTYSVPRLSCDVGASTAGQG*SEPRIP Trigger: GGGGATGCGAGGCTCGGAGCACCCTTGCCCGGCTGT...ACTGGCACCCACGTCACAGGAAAGCCTAGGAACACTGTAAGTGCCGCTTCCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCGGCACTTACAGTGTTCCTAGGCTTTCCTGTGACGTGGGTGCCAGTCTGGCCTGCCCTTGAGGCCTaGGCAGACTCTCCCCTGACA | + |
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Preference number: 2 (lower is better) Translates to: EAALTVFLGFPVTWVPVWPALEA*ADSPLT Trigger: TGTCAGGGGAGAGTCTGCCCAGGCCTCAAGGGCAGG...CCAGACTGGCACCCACGTCACAGGAAAGCCTAGGAACACTGTAAGTGCCGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR-3UTR TCA 90 bp | AGCGGCACTTACAGTGTTCCTAGGCTTTCCTGTGACGTGGGTGCCAGTCTGGATGTCTTTTCCTGCCCTTaGGGCCTGGGCAGACTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SGTYSVPRLSCDVGASLDVFSCP*GLGRLS Trigger: GGAGAGTCTGCCCAGGCCTCAAGGGCAGGAAAAGAC...ATCCAGACTGGCACCCACGTCACAGGAAAGCCTAGGAACACTGTAAGTGCCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR-3UTR GCA 90 bp | CCCGAGGAAGCGGCACTTACAGTGTTCCTAGGCTTTCCTGTGACGTGGGTGCCATTCAGCAGAAGCGCTTaGCGGGAGCAAAGGGACAGA | + |
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Preference number: 2 (lower is better) Translates to: PEEAALTVFLGFPVTWVPFSRSA*REQRDR Trigger: TCTGTCCCTTTGCTCCCGGCAAGCGCTTCTGCTGAA...TGGCACCCACGTCACAGGAAAGCCTAGGAACACTGTAAGTGCCGCTTCCTCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCAGAAAGTCTCAGGCACGAAGAACTGTCCTCGGGTGGAGCATGGGACCTTTAGAACTGTCCTCGGGTaGAGCATGGGACCTTTATTC | + |
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Preference number: 2 (lower is better) Translates to: PQKVSGTKNCPRVEHGTFRTVLG*SMGPLF Trigger: GAATAAAGGTCCCATGCTCCACCCGAGGACAGTTCT...AAAGGTCCCATGCTCCACCCGAGGACAGTTCTTCGTGCCTGAGACTTTCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTTTCCTGTGACGTGGGTGCCAGTCTGGATTCAAAATATCCTTGCATGCACTGAGATGAACAGTGCCTaGCAGCAATCACAGCCGGGC | + |
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Preference number: 2 (lower is better) Translates to: GFPVTWVPVWIQNILACTEMNSA*QQSQPG Trigger: GCCCGGCTGTGATTGCTGCCAGGCACTGTTCATCTC...AGTGCATGCAAGGATATTTTGAATCCAGACTGGCACCCACGTCACAGGAAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGAAAGTCTCAGGCACGAAGAACTGTCCTCGGGTGGAGCATGGGACCTTTAAAGGGACAGAAAAGCTaGGATGAACAGTGCCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: LRKSQARRTVLGWSMGPLKGQKS*DEQCLA Trigger: TGCCAGGCACTGTTCATCTCAGCTTTTCTGTCCCTT...TAAAGGTCCCATGCTCCACCCGAGGACAGTTCTTCGTGCCTGAGACTTTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAGTCTGGATTCAAAATATCCTTGCATGCACTGCAGCTCCTTAGGGAGTCTTTCCTCGGGTGGAGCATaGGACCTTTATTCGTTAAGA | + |
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Preference number: 2 (lower is better) Translates to: ASLDSKYPCMHCSSLGSLSSGGA*DLYSLR Trigger: TCTTAACGAATAAAGGTCCCATGCTCCACCCGAGGA...AAGACTCCCTAAGGAGCTGCAGTGCATGCAAGGATATTTTGAATCCAGACTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR GCA 72 bp | GAACAGTGCCTGGCAGCAATCACAGCCGGGCAAGGGTaGTCCGAGCCTCGCATCCCCCGGCCGGGGGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: EQCLAAITAGQG*SEPRIPRPGAA Trigger: AGCTGCCCCCGGCCGGGGGATGCGAGGCTCGGAGCACCCTTGCCCGGCTGTGATTGCTGCCAGGCACTGTTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR TCA 72 bp | CAGAAGCGCTTGCCGGGAGCAAAGGGACAGAAAAGCTaGGATGAACAGTGCCTGGCAGCAATCACAGCCGGG | + |
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Preference number: 3 (lower is better) Translates to: QKRLPGAKGQKS*DEQCLAAITAG Trigger: CCCGGCTGTGATTGCTGCCAGGCACTGTTCATCTCAGCTTTTCTGTCCCTTTGCTCCCGGCAAGCGCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR GCA 72 bp | GGTGCCAGTCTGGATTCAAAATATCCTTGCATGCACTaGAGCTCCTTAGGGAGTCTTTTCCTGCCCTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: GASLDSKYPCMH*SSLGSLFLPLR Trigger: CCTCAAGGGCAGGAAAAGACTCCCTAAGGAGCTGCAGTGCATGCAAGGATATTTTGAATCCAGACTGGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR CCA 72 bp | AGTCTCAGGCACGAAGAACTGTCCTCGGGTGGAGCATaGGACCTTTATTCGTTAAGACATCAGGCTCCAGAT | + |
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Preference number: 3 (lower is better) Translates to: SLRHEELSSGGA*DLYSLRHQAPD Trigger: ATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGAGGACAGTTCTTCGTGCCTGAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR CCA 72 bp | CTCAGAAAGTCTCAGGCACGAAGAACTGTCCTCGGGTaGAGCATGGGACCTTTATTCGTTAAGACATCAGGC | + |
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Preference number: 3 (lower is better) Translates to: LRKSQARRTVLG*SMGPLFVKTSG Trigger: GCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGAGGACAGTTCTTCGTGCCTGAGACTTTCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR CCA 72 bp | GTGTTCCTAGGCTTTCCTGTGACGTGGGTGCCAGTCTaGATTCAAAATATCCTTGCATGCACTGCAGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: VFLGFPVTWVPV*IQNILACTAAP Trigger: AGGAGCTGCAGTGCATGCAAGGATATTTTGAATCCAGACTGGCACCCACGTCACAGGAAAGCCTAGGAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR GCA 72 bp | TGTGACGTGGGTGCCAGTCTGGATTCAAAATATCCTTaGATGCACTGCAGCTCCTTAGGGAGTCTTTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: CDVGASLDSKYP*MHCSSLGSLFL Trigger: CAGGAAAAGACTCCCTAAGGAGCTGCAGTGCATGCAAGGATATTTTGAATCCAGACTGGCACCCACGTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR-3UTR CAA 90 bp | ACAAAGAAACAAAACCCAGGAATAGTACAAGTATTGAACAGTAGCGAGAGTGGTTTTCAGCAGAAGCGCTaGCCGGGAGCAAAGGGACAG | + |
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Preference number: 3 (lower is better) Translates to: TKKQNPGIVQVLNSSESGFQQKR*PGAKGQ Trigger: CTGTCCCTTTGCTCCCGGCAAGCGCTTCTGCTGAAA...ACCACTCTCGCTACTGTTCAATACTTGTACTATTCCTGGGTTTTGTTTCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| 3UTR GCA 72 bp | AATAAAGGACCACTTTGGAAGACAGTTTTATTGGCTTaGTGTCTTCACCAAGAAAGACTTGTGATTTTTGAA | + |
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Preference number: 3 (lower is better) Translates to: NKGPLWKTVLLA*CLHQERLVIFE Trigger: TTCAAAAATCACAAGTCTTTCTTGGTGAAGACAGCAAGCCAATAAAACTGTCTTCCAAAGTGGTCCTTTATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518498.2 |
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| CDS-3UTR CCA 90 bp | CTCGGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAACCGGCCGGGGGCAGCTaGAGGTGCCTCAGAAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LGWSMGPLFVKTSGSRYEPAGGS*RCLRRC Trigger: GCACCTTCTGAGGCACCTCCAGCTGCCCCCGGCCGG...TTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR GCA 90 bp | CTCGGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAAACAGCCGGGCAAGGGTaGTCCGAGCCTCGCATCCCC | + |
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Preference number: 4 (lower is better) Translates to: LGWSMGPLFVKTSGSRYETAGQG*SEPRIP Trigger: GGGGATGCGAGGCTCGGAGCACCCTTGCCCGGCTGT...TTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR GCA 90 bp | CTCGGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAAAGCTGCCAGAGCCCTTaGTGGGACAGGCCCACGTAC | + |
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Preference number: 4 (lower is better) Translates to: LGWSMGPLFVKTSGSRYESCQSP*WDRPTY Trigger: GTACGTGGGCCTGTCCCAGCAAGGGCTCTGGCAGCT...TTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR TCA 90 bp | GGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAACTTTGCACTCCTTGGGGGTaGCATGGGGGTAGCCGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GWSMGPLFVKTSGSRYELCTPWG*HGGSRS Trigger: ACTGCGGCTACCCCCATGTCACCCCCAAGGAGTGCA...AAGTTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR GCA 90 bp | TCGGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAACGGGGGCAGCTGGAGGTaGCTCAGAAGGTGCATTCTG | + |
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Preference number: 4 (lower is better) Translates to: SGGAWDLYSLRHQAPDMNGGSWR*LRRCIL Trigger: CAGAATGCACCTTCTGAGGCACCTCCAGCTGCCCCC...GTTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR CCA 90 bp | CTCGGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAAGCTGGCACGGCACACTaGTTTGCAGCTGTCCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: LGWSMGPLFVKTSGSRYEAGTAH*FAAVPD Trigger: GTCTGGGACAGCTGCAAACCAGTGTGCCGTGCCAGC...TTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR CCA 90 bp | CTCGGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAACACCCTGTCCTTGGCTaGCACGGCACACTGGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: LGWSMGPLFVKTSGSRYEHPVLG*HGTLVC Trigger: GCAAACCAGTGTGCCGTGCCAGCCAAGGACAGGGTG...TTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR CCA 90 bp | CTCGGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAAAGTCCACCCTGTCCTTaGCTGGCACGGCACACTGGT | + |
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Preference number: 4 (lower is better) Translates to: LGWSMGPLFVKTSGSRYESPPCP*LARHTG Trigger: ACCAGTGTGCCGTGCCAGCCAAGGACAGGGTGGACT...TTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR TCA 90 bp | CTCGGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAACTTCCTGCAGGGGCTTaGAACACCAAGGCACTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LGWSMGPLFVKTSGSRYELPAGA*NTKALQ Trigger: CTGGAGTGCCTTGGTGTTTCAAGCCCCTGCAGGAAG...TTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR GCA 90 bp | TCGGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAACCACGGCACACTGGTTTaGAGCTGTCCCAGACAAAGC | + |
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Preference number: 4 (lower is better) Translates to: SGGAWDLYSLRHQAPDMNHGTLV*SCPRQS Trigger: GCTTTGTCTGGGACAGCTGCAAACCAGTGTGCCGTG...GTTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR GCA 90 bp | TCGGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAACAGGTGCCTCAGAAGGTaGATTCTGCTTCCTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SGGAWDLYSLRHQAPDMNRCLRR*ILLPAG Trigger: CCCTGCAGGAAGCAGAATGCACCTTCTGAGGCACCT...GTTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR GCA 90 bp | CTCGGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAATTCAGCAGAAGCGCTTaGCGGGAGCAAAGGGACAGA | + |
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Preference number: 4 (lower is better) Translates to: LGWSMGPLFVKTSGSRYEFSRSA*REQRDR Trigger: TCTGTCCCTTTGCTCCCGGCAAGCGCTTCTGCTGAA...TTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR CCA 90 bp | GGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAACTTGAGATGAACAGTGCCTaGCAGCAATCACAGCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: GWSMGPLFVKTSGSRYELEMNSA*QQSQPG Trigger: GCCCGGCTGTGATTGCTGCCAGGCACTGTTCATCTC...AAGTTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR TCA 90 bp | TCGGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAACAAGGGACAGAAAAGCTaGGATGAACAGTGCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: SGGAWDLYSLRHQAPDMNKGQKS*DEQCLA Trigger: TGCCAGGCACTGTTCATCTCAGCTTTTCTGTCCCTT...GTTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR CCA 90 bp | CTCGGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAAAGAACTGTCCTCGGGTaGAGCATGGGACCTTTATTC | + |
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Preference number: 4 (lower is better) Translates to: LGWSMGPLFVKTSGSRYERTVLG*SMGPLF Trigger: GAATAAAGGTCCCATGCTCCACCCGAGGACAGTTCT...TTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR TCA 90 bp | CTCGGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAAATCAGGCTCCAGATATaGACTTTCAGCAGAAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: LGWSMGPLFVKTSGSRYEIRLQI*TFSRSA Trigger: AGCGCTTCTGCTGAAAGTTCATATCTGGAGCCTGAT...TTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR GCA 90 bp | GGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAACTTGTGCATTCTGCTTCCTaGAGGGGCTTGAAACACCAA | + |
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Preference number: 4 (lower is better) Translates to: GWSMGPLFVKTSGSRYELVHSAS*RGLKHQ Trigger: TTGGTGTTTCAAGCCCCTGCAGGAAGCAGAATGCAC...AAGTTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR GCA 90 bp | GGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAACTTTCAGAAGGTGCATTCTaGTTCCTGCAGGGGCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: GWSMGPLFVKTSGSRYELSEGAF*FLQGLE Trigger: TTCAAGCCCCTGCAGGAAGCAGAATGCACCTTCTGA...AAGTTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR CCA 90 bp | TCGGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAACTCCTCGGGTGGAGCATaGGACCTTTATTCGTTAAGA | + |
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Preference number: 4 (lower is better) Translates to: SGGAWDLYSLRHQAPDMNSSGGA*DLYSLR Trigger: TCTTAACGAATAAAGGTCCCATGCTCCACCCGAGGA...GTTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS CCA 90 bp | CTTGGGGGTGACATGGGGGTAGCCGCAGTCCACCCTGTCCTTGGCTaGCACGGCACACTGGTTTGCAGACAGGCCCACGTACTCCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: LGGDMGVAAVHPVLG*HGTLVCRQAHVLLS Trigger: GCTGAGGAGTACGTGGGCCTGTCTGCAAACCAGTGTGCCGTGCCAGCCAAGGACAGGGTGGACTGCGGCTACCCCCATGTCACCCCCAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000518498.3 |
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| CDS-3UTR CAA 90 bp | CTCGGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAACAGCTGCCAGAGCCCTaGCTGGGACAGGCCCACGTA | + |
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Preference number: 5 (lower is better) Translates to: LGWSMGPLFVKTSGSRYEQLPEP*LGQAHV Trigger: TACGTGGGCCTGTCCCAGCAAGGGCTCTGGCAGCTG...TTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR CAA 90 bp | GGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAACTTCAGCAGCCCCGGTTGTaGCACTCCTTGGGGGTGACA | + |
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Preference number: 5 (lower is better) Translates to: GWSMGPLFVKTSGSRYELQQPRL*HSLGVT Trigger: TGTCACCCCCAAGGAGTGCAACAACCGGGGCTGCTG...AAGTTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR CAA 90 bp | GGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAACTTAAGCAGCAGCCCCGGTaGTTGCACTCCTTGGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: GWSMGPLFVKTSGSRYELKQQPR*LHSLGV Trigger: CACCCCCAAGGAGTGCAACAACCGGGGCTGCTGCTT...AAGTTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR CAA 90 bp | CTCGGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAAGCACGGCACACTGGTTaGCAGCTGTCCCAGACAAAG | + |
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Preference number: 5 (lower is better) Translates to: LGWSMGPLFVKTSGSRYEARHTG*QLSQTK Trigger: CTTTGTCTGGGACAGCTGCAAACCAGTGTGCCGTGC...TTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR CAA 90 bp | GGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAACTTGCTTCCTGCAGGGGCTaGAAACACCAAGGCACTCCA | + |
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Preference number: 5 (lower is better) Translates to: GWSMGPLFVKTSGSRYELASCRG*KHQGTP Trigger: TGGAGTGCCTTGGTGTTTCAAGCCCCTGCAGGAAGC...AAGTTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS-3UTR CAA 90 bp | GGGTGGAGCATGGGACCTTTATTCGTTAAGACATCAGGCTCCAGATATGAACTTTTTCAGCAGAAGCGCTaGCCGGGAGCAAAGGGACAG | + |
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Preference number: 5 (lower is better) Translates to: GWSMGPLFVKTSGSRYELFQQKR*PGAKGQ Trigger: CTGTCCCTTTGCTCCCGGCAAGCGCTTCTGCTGAAA...AAGTTCATATCTGGAGCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398431.2 |
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| CDS CCA 72 bp | GTGCTCCGAGCCTCGCATCCCCCGGCCGGGGGCAGCTaGAGGTGCCTCAGAAGGTGCATTCTGCTTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: VLRASHPPAGGS*RCLRRCILLPA Trigger: TGCAGGAAGCAGAATGCACCTTCTGAGGCACCTCCAGCTGCCCCCGGCCGGGGGATGCGAGGCTCGGAGCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000398431.2 ENST00000489676.1 ENST00000518498.3 |
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| CDS CCA 72 bp | GACATGGGGGTAGCCGCAGTCCACCCTGTCCTTGGCTaGCACGGCACACTGGTTTGCAGACAGGCCCACGTA | + |
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Preference number: 6 (lower is better) Translates to: DMGVAAVHPVLG*HGTLVCRQAHV Trigger: TACGTGGGCCTGTCTGCAAACCAGTGTGCCGTGCCAGCCAAGGACAGGGTGGACTGCGGCTACCCCCATGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000518498.3 |
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| CDS GCA 72 bp | GTCCACCCTGTCCTTGGCTGGCACGGCACACTGGTTTaGAGCTGTCCCAGACAAAGCCCTGTCAGCTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: VHPVLGWHGTLV*SCPRQSPVSCQ Trigger: CTGGCAGCTGACAGGGCTTTGTCTGGGACAGCTGCAAACCAGTGTGCCGTGCCAGCCAAGGACAGGGTGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398431.2 ENST00000489676.1 |
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| CDS CCA 72 bp | GACATGGGGGTAGCCGCAGTCCACCCTGTCCTTGGCTaGCACGGCACACTGGTTTGCAGCTGTCCCAGACAA | + |
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Preference number: 6 (lower is better) Translates to: DMGVAAVHPVLG*HGTLVCSCPRQ Trigger: TTGTCTGGGACAGCTGCAAACCAGTGTGCCGTGCCAGCCAAGGACAGGGTGGACTGCGGCTACCCCCATGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398431.2 ENST00000489676.1 |
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| CDS CAA 72 bp | AGTCCACCCTGTCCTTGGCTGGCACGGCACACTGGTTaGCAGCTGTCCCAGACAAAGCCCTGTCAGCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: SPPCPWLARHTG*QLSQTKPCQLP Trigger: TGGCAGCTGACAGGGCTTTGTCTGGGACAGCTGCAAACCAGTGTGCCGTGCCAGCCAAGGACAGGGTGGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398431.2 ENST00000489676.1 |
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