RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TFE3 (Homo sapiens)

Ensembl gene IDs: ENSG00000068323

Ensembl transcript IDs: ENST00000315869.8, ENST00000481606.1, ENST00000487451.1, ENST00000493583.5, ENST00000495940.2

Found 378 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCAGTGGCTGGGCACTTGCGGGCCCCGGCGGTGGGGTGAGGGCCTaGGAAGCCAGCTTGGGCCCGAGTGTGGTGGACAGGTACTGTTTC +
Preference number: 1 (lower is better)
Translates to: GSGWALAGPGGGVRA*EASLGPSVVDRYCF
Trigger: GAAACAGTACCTGTCCACCACACTCGGGCCCAAGCTGGCTTCCCAGGCCCTCACCCCACCGCCGGGGCCCGCAAGTGCCCAGCCACTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR CCA 90 bp GGGCCTGCAGTTCTAGTTCCTGAATTCGGAGCTGCAGGCTGCGGTTaGCCTGCTCCAGGGATCGCTGCCGGCTCTCCAGGTCTTTGGAGC +
Preference number: 1 (lower is better)
Translates to: GPAVLVPEFGAAGCG*PAPGIAAGSPGLWS
Trigger: GCTCCAAAGACCTGGAGAGCCGGCAGCGATCCCTGGAGCAGGCCAACCGCAGCCTGCAGCTCCGAATTCAGGAACTAGAACTGCAGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR CCA 90 bp TGCGGTTGGCCTGCTCCAGGGATCGCTGCCGGCTCTCCAGGTCTTTaGAGCGCTGCTGCTCCTTCTGCAGCTTGCGGATATAATCCACAG +
Preference number: 1 (lower is better)
Translates to: CGWPAPGIAAGSPGL*SAAAPSAACGYNPQ
Trigger: CTGTGGATTATATCCGCAAGCTGCAGAAGGAGCAGCAGCGCTCCAAAGACCTGGAGAGCCGGCAGCGATCCCTGGAGCAGGCCAACCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR TCA 90 bp AGGGGGCAGGCCCTGATCTCATGTCCTTCTCCAGCCTTCTCCTTCTaGAATACCTGCACTGGGCGGTTCCTTTGGGGAAGGTGCAGGGCC +
Preference number: 1 (lower is better)
Translates to: RGQALISCPSPAFSF*NTCTGRFLWGRCRA
Trigger: GGCCCTGCACCTTCCCCAAAGGAACCGCCCAGTGCAGGTATTTCAGAAGGAGAAGGCTGGAGAAGGACATGAGATCAGGGCCTGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR CCA 90 bp CAAAGGATGGAGCAACATCCTGACATCTCCCTTTCCCAGGAGACCTaGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACCTCATCCTGT +
Preference number: 1 (lower is better)
Translates to: QRMEQHPDISLSQET*LGQSLGDRVETSSC
Trigger: ACAGGATGAGGTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGAAAGGGAGATGTCAGGATGTTGCTCCATCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR CCA 90 bp GGGGAGCTTAAGTACCACTCCTCCCTGCAGTGTGGAATGCTTAGATaGGATGTTGCTGAGGGACAAGGGTGGGGCTGTGATCTCCACAAG +
Preference number: 1 (lower is better)
Translates to: GELKYHSSLQCGMLR*DVAEGQGWGCDLHK
Trigger: CTTGTGGAGATCACAGCCCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCATTCCACACTGCAGGGAGGAGTGGTACTTAAGCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR GCA 90 bp TTAAACCCCCAGGGCTGGGACCTCCATTACTTGACTCCTCTTCTGTaGCAGGACGGACTAGACTGGTGGTTCCAAGACAAAGGATGGAGC +
Preference number: 1 (lower is better)
Translates to: LNPQGWDLHYLTPLL*QDGLDWWFQDKGWS
Trigger: GCTCCATCCTTTGTCTTGGAACCACCAGTCTAGTCCGTCCTGGCACAGAAGAGGAGTCAAGTAATGGAGGTCCCAGCCCTGGGGGTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR GCA 90 bp TTAAGGCAGGGGAGCTTAAGTACCACTCCTCCCTGCAGTGTGGAATaGTTAGATGGGATGTTGCTGAGGGACAAGGGTGGGGCTGTGATC +
Preference number: 1 (lower is better)
Translates to: LRQGSLSTTPPCSVE*LDGMLLRDKGGAVI
Trigger: GATCACAGCCCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCATTCCACACTGCAGGGAGGAGTGGTACTTAAGCTCCCCTGCCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR GCA 90 bp GTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCACTCCTCCCTaGAGTGTGGAATGCTTAGATGGGATGTTGCTGAGGGACAAGGGT +
Preference number: 1 (lower is better)
Translates to: VGPRLRQGSLSTTPP*SVECLDGMLLRDKG
Trigger: ACCCTTGTCCCTCAGCAACATCCCATCTAAGCATTCCACACTGCAGGGAGGAGTGGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR CCA 90 bp GACCTCCATTACTTGACTCCTCTTCTGTGCCAGGACGGACTAGACTaGTGGTTCCAAGACAAAGGATGGAGCAACATCCTGACATCTCCC +
Preference number: 1 (lower is better)
Translates to: DLHYLTPLLCQDGLD*WFQDKGWSNILTSP
Trigger: GGGAGATGTCAGGATGTTGCTCCATCCTTTGTCTTGGAACCACCAGTCTAGTCCGTCCTGGCACAGAAGAGGAGTCAAGTAATGGAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR CCA 90 bp CTCCATTACTTGACTCCTCTTCTGTGCCAGGACGGACTAGACTGGTaGTTCCAAGACAAAGGATGGAGCAACATCCTGACATCTCCCTTT +
Preference number: 1 (lower is better)
Translates to: LHYLTPLLCQDGLDW*FQDKGWSNILTSPF
Trigger: AAAGGGAGATGTCAGGATGTTGCTCCATCCTTTGTCTTGGAACCACCAGTCTAGTCCGTCCTGGCACAGAAGAGGAGTCAAGTAATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CCA 90 bp GGTCGCTGGGAAAGTGCAGGTCCAGAAGGGCATCTGAGGGCGGTGCAGGGGGCTCTCAGGGGCAGGCAGTaGCTGGGCACTTGCGGGCCC +
Preference number: 2 (lower is better)
Translates to: GRWESAGPEGHLRAVQGALRGRQ*LGTCGP
Trigger: GGGCCCGCAAGTGCCCAGCCACTGCCTGCCCCTGAG...AGCCCCCTGCACCGCCCTCAGATGCCCTTCTGGACCTGCACTTTCCCAGCGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CCA 90 bp TGGCCTTGGAGACAGCAGGGGACACTGAAGAGAGCAGGGGATCGGAGGCAGCCCGTGGGGCCGGTAGTGTaGGCAGCCTCAGGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: WPWRQQGTLKRAGDRRQPVGPVV*AASGAG
Trigger: GCCTGCCCCTGAGGCTGCCCACACTACCGGCCCCAC...GGGCTGCCTCCGATCCCCTGCTCTCTTCAGTGTCCCCTGCTGTCTCCAAGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CCA 90 bp TGCGGTTGGCCTGCTCCAGGGATCGCTGCCGGCTCTCCAGGTCTTTGGAGCGCTGGCAGGGCAGTCTCATaGGAGGGTGGGGGAAAAGGC +
Preference number: 2 (lower is better)
Translates to: CGWPAPGIAAGSPGLWSAGRAVS*EGGGKG
Trigger: GCCTTTTCCCCCACCCTCCCATGAGACTGCCCTGCC...AGCGCTCCAAAGACCTGGAGAGCCGGCAGCGATCCCTGGAGCAGGCCAACCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CCA 90 bp TGCGGTTGGCCTGCTCCAGGGATCGCTGCCGGCTCTCCAGGTCTTTGGAGCGCTCACCTGAGCAGGGGGTaGACGGCTCAATGTGTGGCC +
Preference number: 2 (lower is better)
Translates to: CGWPAPGIAAGSPGLWSAHLSRG*TAQCVA
Trigger: GGCCACACATTGAGCCGTCCACCCCCTGCTCAGGTG...AGCGCTCCAAAGACCTGGAGAGCCGGCAGCGATCCCTGGAGCAGGCCAACCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR TCA 90 bp TGGCCTTGGAGACAGCAGGGGACACTGAAGAGAGCAGGGGATCGGAGGCAGCCCCTCCTCCTCCTTGCCTaGTTACAGGGGTGGGGCCTG +
Preference number: 2 (lower is better)
Translates to: WPWRQQGTLKRAGDRRQPLLLLA*LQGWGL
Trigger: CAGGCCCCACCCCTGTAATCAGGCAAGGAGGAGGAG...GGGCTGCCTCCGATCCCCTGCTCTCTTCAGTGTCCCCTGCTGTCTCCAAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CCA 90 bp TGGCCTTGGAGACAGCAGGGGACACTGAAGAGAGCAGGGGATCGGAGGCAGCCCACACAGGCAGCGTGCTaGGGAGCTGCAGTCCTGTGG +
Preference number: 2 (lower is better)
Translates to: WPWRQQGTLKRAGDRRQPTQAAC*GAAVLW
Trigger: CCACAGGACTGCAGCTCCCCAGCACGCTGCCTGTGT...GGGCTGCCTCCGATCCCCTGCTCTCTTCAGTGTCCCCTGCTGTCTCCAAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CCA 90 bp CTCCCTTTCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACGGGCCTCATCCTGACTaGTCCTCCTTTCCTGGGTGG +
Preference number: 2 (lower is better)
Translates to: LPFPGDLARTVPRGQGRDGPHPD*SSFPGW
Trigger: CCACCCAGGAAAGGAGGACCAGTCAGGATGAGGCCC...GTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGAAAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR GCA 90 bp GGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCAGGGTTCATGGTACTGTTTCACCTGCTaGCGGCGCGCCTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: GLILTSVPCLGRAGQGSWYCFTC*RRACCR
Trigger: CCTGCAGCAGGCGCGCCGGCAGCAGGTGAAACAGTA...CCATGAACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CCA 90 bp GCTGCCGGCTCTCCAGGTCTTTGGAGCGCTGCTGCTCCTTCTGCAGCTTGCGGAGTTGGGTTCTCCAGATaGGTCTGCACCTTGAGCACC +
Preference number: 2 (lower is better)
Translates to: AAGSPGLWSAAAPSAACGVGFSR*VCTLST
Trigger: GGTGCTCAAGGTGCAGACCCATCTGGAGAACCCAAC...TCCGCAAGCTGCAGAAGGAGCAGCAGCGCTCCAAAGACCTGGAGAGCCGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR TCA 90 bp CGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCTCCTTGCCTGATTACAGGGGTGGGGCCTaGTCACATCTCCTCTTCCCC +
Preference number: 2 (lower is better)
Translates to: RFLWGRCRASSDSSSLPDYRGGA*SHLLFP
Trigger: GGGGAAGAGGAGATGTGATCAGGCCCCACCCCTGTA...ATCAGGCAAGGAGGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR GCA 90 bp TGCTTAGATGGGATGTTGCTGAGGGACAAGGGTGGGGCTGTGATCTCCACAAGCGGCAGGAGAGGCAGGTaGAGGACTGGGGAAGGGAGC +
Preference number: 2 (lower is better)
Translates to: CLDGMLLRDKGGAVISTSGRRGR*RTGEGS
Trigger: GCTCCCTTCCCCAGTCCTGCACCTGCCTCTCCTGCC...GCTTGTGGAGATCACAGCCCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CCA 90 bp CGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCTCCTTGCCTGATGGGCCTCATCCTGACTaGTCCTCCTTTCCTGGGTGG +
Preference number: 2 (lower is better)
Translates to: RFLWGRCRASSDSSSLPDGPHPD*SSFPGW
Trigger: CCACCCAGGAAAGGAGGACCAGTCAGGATGAGGCCC...ATCAGGCAAGGAGGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CCA 90 bp CAGAGCCCTCCTAGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAGGCAGGGCAGTCTCATaGGAGGGTGGGGGAAAAGGC +
Preference number: 2 (lower is better)
Translates to: QSPPRLGQVGPRLRQGSLGRAVS*EGGGKG
Trigger: GCCTTTTCCCCCACCCTCCCATGAGACTGCCCTGCC...TAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCTAGGAGGGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CCA 90 bp CGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCTCCTTGCCTGATTGGAGTGGGAGGTACTaGCAGGCCATGGATCTGGGC +
Preference number: 2 (lower is better)
Translates to: RFLWGRCRASSDSSSLPDWSGRY*QAMDLG
Trigger: GCCCAGATCCATGGCCTGCCAGTACCTCCCACTCCA...ATCAGGCAAGGAGGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR TCA 90 bp TGGGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCAGGGTTCATTACAGGGGTGGGGCCTaGTCACATCTCCTCTTCCCC +
Preference number: 2 (lower is better)
Translates to: WVSSSLLFLAWAEQGRVHYRGGA*SHLLFP
Trigger: GGGGAAGAGGAGATGTGATCAGGCCCCACCCCTGTA...ATGAACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR GCA 90 bp TGGCCTTGGAGACAGCAGGGGACACTGAAGAGAGCAGGGGATCGGAGGCAGCCCATCACCTTCCCAAACTaGCCCTCAAGGAAGAAGGCA +
Preference number: 2 (lower is better)
Translates to: WPWRQQGTLKRAGDRRQPITFPN*PSRKKA
Trigger: TGCCTTCTTCCTTGAGGGGCAGTTTGGGAAGGTGAT...GGGCTGCCTCCGATCCCCTGCTCTCTTCAGTGTCCCCTGCTGTCTCCAAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR TCA 90 bp TGGGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCAGGGTTCATCCAGCCTTCTCCTTCTaGAATACCTGCACTGGGCGG +
Preference number: 2 (lower is better)
Translates to: WVSSSLLFLAWAEQGRVHPAFSF*NTCTGR
Trigger: CCGCCCAGTGCAGGTATTTCAGAAGGAGAAGGCTGG...ATGAACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR TCA 90 bp CTTCTGTGCCAGGACGGACTAGACTGGTGGTTCCAAGACAAAGGATGGAGCAACGATGGGTCTGCACCTTaGGCACCTCCCTGGGCACCT +
Preference number: 2 (lower is better)
Translates to: LLCQDGLDWWFQDKGWSNDGSAP*APPWAP
Trigger: AGGTGCCCAGGGAGGTGCTCAAGGTGCAGACCCATC...GTTGCTCCATCCTTTGTCTTGGAACCACCAGTCTAGTCCGTCCTGGCACAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR GCA 90 bp TGCTTAGATGGGATGTTGCTGAGGGACAAGGGTGGGGCTGTGATCTCCACAAGCTACATGGAACGTTGCTaGGCCTGGCCTGCCCTCCTC +
Preference number: 2 (lower is better)
Translates to: CLDGMLLRDKGGAVISTSYMERC*AWPALL
Trigger: GAGGAGGGCAGGCCAGGCGCAGCAACGTTCCATGTA...GCTTGTGGAGATCACAGCCCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CCA 90 bp GGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCAGGGTTCATGGTCTCCTTCCCTCACCTaGGCAAGGATGAGTCCCACA +
Preference number: 2 (lower is better)
Translates to: GLILTSVPCLGRAGQGSWSPSLT*ARMSPT
Trigger: TGTGGGACTCATCCTTGCCCAGGTGAGGGAAGGAGA...CCATGAACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CCA 90 bp CAGAGCCCTCCTAGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTACTTCTGTTCCTTGCCTaGGCAGAGCAGGGCAGGGTT +
Preference number: 2 (lower is better)
Translates to: QSPPRLGQVGPRLRQGSLLLFLA*AEQGRV
Trigger: AACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAG...TAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCTAGGAGGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CCA 90 bp GGACTCTGCCCAAGGGTGGGGGCCTCTCACTCCAGATATAGGTCTGGAAAATTCCCCAGGGGAAGGGGCTaGGTCTCATCCTCACTTCTG +
Preference number: 2 (lower is better)
Translates to: GLCPRVGASHSRYRSGKFPRGRG*VSSSLL
Trigger: CAGAAGTGAGGATGAGACCCAGCCCCTTCCCCTGGG...GAATTTTCCAGACCTATATCTGGAGTGAGAGGCCCCCACCCTTGGGCAGAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CCA 90 bp CTTCTGTGCCAGGACGGACTAGACTGGTGGTTCCAAGACAAAGGATGGAGCAACGGACGGCTCAATGTGTaGCCCCCAGCAGAGACGCCA +
Preference number: 2 (lower is better)
Translates to: LLCQDGLDWWFQDKGWSNGRLNV*PPAETP
Trigger: TGGCGTCTCTGCTGGGGGCCACACATTGAGCCGTCC...GTTGCTCCATCCTTTGTCTTGGAACCACCAGTCTAGTCCGTCCTGGCACAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CCA 90 bp GCCCAAGGGTGGGGGCCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGCCTGGGAAGCCAGCTTaGGCCCGAGTGTGGTGGACA +
Preference number: 2 (lower is better)
Translates to: AQGWGPLTPDIGLENSSMPGKPA*ARVWWT
Trigger: TGTCCACCACACTCGGGCCCAAGCTGGCTTCCCAGG...CATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGGCCCCCACCCTTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CCA 90 bp TTCCAGCGCATCTCCGGGTCACTGGACTTAGGGATGAGAGTGCCCAGTTCCTTGGCTGACAGTGATGGCTaGTGTGGCCACGCCTTGACT +
Preference number: 2 (lower is better)
Translates to: FQRISGSLDLGMRVPSSLADSDG*CGHALT
Trigger: AGTCAAGGCGTGGCCACACCAGCCATCACTGTCAGC...CAAGGAACTGGGCACTCTCATCCCTAAGTCCAGTGACCCGGAGATGCGCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR TCA 90 bp TACCACTCCTCCCTGCAGTGTGGAATGCTTAGATGGGATGTTGCTGAGGGACAACTCCTCCTCCTTGCCTaGTTACAGGGGTGGGGCCTG +
Preference number: 2 (lower is better)
Translates to: YHSSLQCGMLRWDVAEGQLLLLA*LQGWGL
Trigger: CAGGCCCCACCCCTGTAATCAGGCAAGGAGGAGGAG...TTGTCCCTCAGCAACATCCCATCTAAGCATTCCACACTGCAGGGAGGAGTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR TCA 90 bp GTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGGGAAGGCCCAGGGGGCAGGCCCTaGTCTCATGTCCTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: VQYAFTTLLQASALLGEGPGGRP*SHVLLQ
Trigger: CTGGAGAAGGACATGAGATCAGGGCCTGCCCCCTGG...GCCTTCCCCCAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR TCA 90 bp CAGAGCCCTCCTAGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAGGGACCTCCATTACTTaGCTCCTCTTCTGTGCCAGG +
Preference number: 2 (lower is better)
Translates to: QSPPRLGQVGPRLRQGSLGTSIT*LLFCAR
Trigger: CCTGGCACAGAAGAGGAGTCAAGTAATGGAGGTCCC...TAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCTAGGAGGGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR TCA 90 bp TGCTTAGATGGGATGTTGCTGAGGGACAAGGGTGGGGCTGTGATCTCCACAAGCACAAGGGTGGGGCTGTaGTCTCCACAAGCACTAGCG +
Preference number: 2 (lower is better)
Translates to: CLDGMLLRDKGGAVISTSTRVGL*SPQALA
Trigger: CGCTAGTGCTTGTGGAGATCACAGCCCCACCCTTGT...GCTTGTGGAGATCACAGCCCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR GCA 90 bp CTCGGTCTCAGAGATCTCCCGTTTGATGTTGGGCAGCTCAGCTGGGCAGGAGTTTTCCTTTGGGGAAGGTaGAGGGCCTCATCTGACTCC +
Preference number: 2 (lower is better)
Translates to: LGLRDLPFDVGQLSWAGVFLWGR*RASSDS
Trigger: GGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAA...AACTCCTGCCCAGCTGAGCTGCCCAACATCAAACGGGAGATCTCTGAGACCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR GCA 90 bp AGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGGGAAGAAGGCAGGACTCTaGCCAAGGGTGGGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: RGYNMLLQPSSKLLPCWGKKAGL*PRVGAS
Trigger: AGAGGCCCCCACCCTTGGGCAGAGTCCTGCCTTCTT...CCCCCAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CCA 90 bp CCTCCTAGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCCTTTCCCAGGAGACCTaGCTAGGACAGTCCCTAGGG +
Preference number: 2 (lower is better)
Translates to: PPRLGQVGPRLRQGSLSTLSQET*LGQSLG
Trigger: CCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGAAAG...GGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCTAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CCA 90 bp GGACTCTGCCCAAGGGTGGGGGCCTCTCACTCCAGATATAGGTCTGGAAAATTCGCTGAGGGACAAGGGTaGGGCTGTGATCTCCACAAG +
Preference number: 2 (lower is better)
Translates to: GLCPRVGASHSRYRSGKFAEGQG*GCDLHK
Trigger: CTTGTGGAGATCACAGCCCCACCCTTGTCCCTCAGC...GAATTTTCCAGACCTATATCTGGAGTGAGAGGCCCCCACCCTTGGGCAGAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CCA 90 bp TGCTTAGATGGGATGTTGCTGAGGGACAAGGGTGGGGCTGTGATCTCCACAAGCCAGGTGGTAGCGCGTTaGGTTCTCCAGATGGGTCTG +
Preference number: 2 (lower is better)
Translates to: CLDGMLLRDKGGAVISTSQVVAR*VLQMGL
Trigger: CAGACCCATCTGGAGAACCCAACGCGCTACCACCTG...GCTTGTGGAGATCACAGCCCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CCA 90 bp TGCTTAGATGGGATGTTGCTGAGGGACAAGGGTGGGGCTGTGATCTCCACAAGCAAAGCAGCCCTGGAGTaGGAGGTACTGGCAGGCCAT +
Preference number: 2 (lower is better)
Translates to: CLDGMLLRDKGGAVISTSKAALE*EVLAGH
Trigger: ATGGCCTGCCAGTACCTCCCACTCCAGGGCTGCTTT...GCTTGTGGAGATCACAGCCCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR TCA 90 bp AATGAGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGTCACCTGGGCAAGGATaGGTCCCACAGGGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: NEGVQYAFTTLLQASALLSPGQG*VPQGQG
Trigger: CCCCTGCCCCTGTGGGACTCATCCTTGCCCAGGTGA...CAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR TCA 90 bp GGTCGCTGGGAAAGTGCAGGTCCAGAAGGGCATCTGAGGGCGGTGCAGGGGGCTTCTTGCCCTACATGTTaGAAAAGAATACTGAGGTAC +
Preference number: 2 (lower is better)
Translates to: GRWESAGPEGHLRAVQGASCPTC*KRILRY
Trigger: GTACCTCAGTATTCTTTTTCAACATGTAGGGCAAGA...AGCCCCCTGCACCGCCCTCAGATGCCCTTCTGGACCTGCACTTTCCCAGCGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR GCA 90 bp AGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGGGCTGACTCCTCCTCCTTaGCTGATTACAGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: RGYNMLLQPSSKLLPCWGLTPPP*LITGVG
Trigger: CCCCACCCCTGTAATCAGGCAAGGAGGAGGAGTCAG...CCCCCAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR GCA 90 bp CCTCCTAGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCTTCCTTTGGGGAAGGTaGAGGGCCTCATCTGACTCC +
Preference number: 2 (lower is better)
Translates to: PPRLGQVGPRLRQGSLSTFLWGR*RASSDS
Trigger: GGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAA...GGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCTAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR GCA 90 bp TGCTTAGATGGGATGTTGCTGAGGGACAAGGGTGGGGCTGTGATCTCCACAAGCTCCAAGCTTCTGCCTTaGTGGGGGAAGGCTTCCAGT +
Preference number: 2 (lower is better)
Translates to: CLDGMLLRDKGGAVISTSSKLLP*WGKASS
Trigger: ACTGGAAGCCTTCCCCCAGCAAGGCAGAAGCTTGGA...GCTTGTGGAGATCACAGCCCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CCA 90 bp GTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGGGAAGGCACTGGGCGGTTCCTTTaGGGAAGGTGCAGGGCCTCA +
Preference number: 2 (lower is better)
Translates to: VQYAFTTLLQASALLGEGTGRFL*GRCRAS
Trigger: TGAGGCCCTGCACCTTCCCCAAAGGAACCGCCCAGT...GCCTTCCCCCAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CCA 90 bp CTCCTCAATGTCCAGCTGCTCTGGCTTGAGGCTGTCAGAAGCCGAAGTCGTGGCTTAAACCCCCAGGGCTaGGACCTCCATTACTTGACT +
Preference number: 2 (lower is better)
Translates to: LLNVQLLWLEAVRSRSRGLNPQG*DLHYLT
Trigger: AGTCAAGTAATGGAGGTCCCAGCCCTGGGGGTTTAA...GCCACGACTTCGGCTTCTGACAGCCTCAAGCCAGAGCAGCTGGACATTGAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CCA 90 bp TACCACTCCTCCCTGCAGTGTGGAATGCTTAGATGGGATGTTGCTGAGGGACAACCTATAGGGAAGGGGTaGGGCCTGGCTCCTCCATTC +
Preference number: 2 (lower is better)
Translates to: YHSSLQCGMLRWDVAEGQPIGKG*GLAPPF
Trigger: GAATGGAGGAGCCAGGCCCCACCCCTTCCCTATAGG...TTGTCCCTCAGCAACATCCCATCTAAGCATTCCACACTGCAGGGAGGAGTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CCA 90 bp TTGTCTTTCTTCTGCCGTTCCTTCAAAAGGGCCTTTGCCTCGGTCTCAGAGATCGGAGCTGCAGTCCTGTaGTGCCTCCGGGCAGATAGC +
Preference number: 2 (lower is better)
Translates to: LSFFCRSFKRAFASVSEIGAAVL*CLRADS
Trigger: GCTATCTGCCCGGAGGCACCACAGGACTGCAGCTCC...GATCTCTGAGACCGAGGCAAAGGCCCTTTTGAAGGAACGGCAGAAGAAAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR CAA 90 bp CGCATCTCCGGGTCACTGGACTTAGGGATGAGAGTGCCCAGTTCCTaGATCCTGTCGTTAATGTTGAATCGCCTGCGACGCTCAATTAGG +
Preference number: 2 (lower is better)
Translates to: RISGSLDLGMRVPSS*ILSLMLNRLRRSIR
Trigger: CCTAATTGAGCGTCGCAGGCGATTCAACATTAACGACAGGATCAAGGAACTGGGCACTCTCATCCCTAAGTCCAGTGACCCGGAGATGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CCA 90 bp CGGACTAGACTGGTGGTTCCAAGACAAAGGATGGAGCAACATCCTGACATCTCCTCTCCTTCCCTCACCTaGGCAAGGATGAGTCCCACA +
Preference number: 2 (lower is better)
Translates to: RTRLVVPRQRMEQHPDISSPSLT*ARMSPT
Trigger: TGTGGGACTCATCCTTGCCCAGGTGAGGGAAGGAGA...GGAGATGTCAGGATGTTGCTCCATCCTTTGTCTTGGAACCACCAGTCTAGTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CCA 90 bp ACAAGCACTAGCGGTGGCCTGGTCCTACTGATTCTTTCACACCTGAAATACCTGCTTTCCCAGGAGACCTaGCTAGGACAGTCCCTAGGG +
Preference number: 2 (lower is better)
Translates to: TSTSGGLVLLILSHLKYLLSQET*LGQSLG
Trigger: CCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGAAAG...CAGGTATTTCAGGTGTGAAAGAATCAGTAGGACCAGGCCACCGCTAGTGCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CCA 90 bp GAGCTTAAGTACCACTCCTCCCTGCAGTGTGGAATGCTTAGATGGGATGTTGCTGGCTCTCCAGGTCTTTaGAGCGCTGCTGCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: ELKYHSSLQCGMLRWDVAGSPGL*SAAAPS
Trigger: AGAAGGAGCAGCAGCGCTCCAAAGACCTGGAGAGCC...AGCAACATCCCATCTAAGCATTCCACACTGCAGGGAGGAGTGGTACTTAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR TCA 90 bp TTGTCTTTCTTCTGCCGTTCCTTCAAAAGGGCCTTTGCCTCGGTCTCAGAGATCGGTGTGGCCACGCCTTaGCTACTGTACACATCAAGC +
Preference number: 2 (lower is better)
Translates to: LSFFCRSFKRAFASVSEIGVATP*LLYTSS
Trigger: GCTTGATGTGTACAGTAGTCAAGGCGTGGCCACACC...GATCTCTGAGACCGAGGCAAAGGCCCTTTTGAAGGAACGGCAGAAGAAAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR GCA 90 bp GTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGGGAAGGCTCCTCAATGTCCAGCTaGTCTGGCTTGAGGCTGTCA +
Preference number: 2 (lower is better)
Translates to: VQYAFTTLLQASALLGEGSSMSS*SGLRLS
Trigger: TGACAGCCTCAAGCCAGAGCAGCTGGACATTGAGGA...GCCTTCCCCCAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CCA 90 bp ACAAGCACTAGCGGTGGCCTGGTCCTACTGATTCTTTCACACCTGAAATACCTGTGGGCCCGAGTGTGGTaGACAGGTACTGTTTCACCT +
Preference number: 2 (lower is better)
Translates to: TSTSGGLVLLILSHLKYLWARVW*TGTVSP
Trigger: AGGTGAAACAGTACCTGTCCACCACACTCGGGCCCA...CAGGTATTTCAGGTGTGAAAGAATCAGTAGGACCAGGCCACCGCTAGTGCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR TCA 90 bp AATGAGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGCAGAGATCTCCCGTTTaGTGTTGGGCAGCTCAGCTG +
Preference number: 2 (lower is better)
Translates to: NEGVQYAFTTLLQASALLQRSPV*CWAAQL
Trigger: CAGCTGAGCTGCCCAACATCAAACGGGAGATCTCTG...CAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR GCA 90 bp GTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGGGAAGGCCTTCAAAAGGGCCTTTaGCTCGGTCTCAGAGATCTC +
Preference number: 2 (lower is better)
Translates to: VQYAFTTLLQASALLGEGLQKGL*LGLRDL
Trigger: GAGATCTCTGAGACCGAGGCAAAGGCCCTTTTGAAG...GCCTTCCCCCAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CCA 90 bp TACCACTCCTCCCTGCAGTGTGGAATGCTTAGATGGGATGTTGCTGAGGGACAACAGGACGGACTAGACTaGTGGTTCCAAGACAAAGGA +
Preference number: 2 (lower is better)
Translates to: YHSSLQCGMLRWDVAEGQQDGLD*WFQDKG
Trigger: TCCTTTGTCTTGGAACCACCAGTCTAGTCCGTCCTG...TTGTCCCTCAGCAACATCCCATCTAAGCATTCCACACTGCAGGGAGGAGTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CCA 90 bp CCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGAAATTTCATAATCTGGCGCCATGGGGCTGTTaGGCGCACTGCCTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: PLTPDIGLENSSMKFHNLAPWGC*AHCLWG
Trigger: GCCCCACAGGCAGTGCGCCCAACAGCCCCATGGCGC...CAGATTATGAAATTTCATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR GCA 90 bp AATGAGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGTTGACTCCTCTTCTGTaGCAGGACGGACTAGACTGG +
Preference number: 2 (lower is better)
Translates to: NEGVQYAFTTLLQASALLLTPLL*QDGLDW
Trigger: CCAGTCTAGTCCGTCCTGGCACAGAAGAGGAGTCAA...CAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR TCA 90 bp AGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGGGAACTCTGAAATGGGGTaGTTCCTCCAAATGAAGAAC +
Preference number: 2 (lower is better)
Translates to: RGYNMLLQPSSKLLPCWGNSEMG*FLQMKN
Trigger: GTTCTTCATTTGGAGGAATCACCCCATTTCAGAGTT...CCCCCAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR TCA 90 bp CCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGAAATTTCATAATCTGAGCTGGACCCGATGGTaGGCAGCGCCATGGGGCTGT +
Preference number: 2 (lower is better)
Translates to: PLTPDIGLENSSMKFHNLSWTRW*AAPWGC
Trigger: ACAGCCCCATGGCGCTGCTCACCATCGGGTCCAGCT...CAGATTATGAAATTTCATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CCA 90 bp TACCACTCCTCCCTGCAGTGTGGAATGCTTAGATGGGATGTTGCTGAGGGACAATTCCAAGACAAAGGATaGAGCAACATCCTGACATCT +
Preference number: 2 (lower is better)
Translates to: YHSSLQCGMLRWDVAEGQFQDKG*SNILTS
Trigger: AGATGTCAGGATGTTGCTCCATCCTTTGTCTTGGAA...TTGTCCCTCAGCAACATCCCATCTAAGCATTCCACACTGCAGGGAGGAGTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CCA 90 bp AATGAGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGTGTGGAATGCTTAGATaGGATGTTGCTGAGGGACAA +
Preference number: 2 (lower is better)
Translates to: NEGVQYAFTTLLQASALLCGMLR*DVAEGQ
Trigger: TTGTCCCTCAGCAACATCCCATCTAAGCATTCCACA...CAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR TCA 90 bp GAGCTTAAGTACCACTCCTCCCTGCAGTGTGGAATGCTTAGATGGGATGTTGCTTCTTGCCCTACATGTTaGAAAAGAATACTGAGGTAC +
Preference number: 2 (lower is better)
Translates to: ELKYHSSLQCGMLRWDVASCPTC*KRILRY
Trigger: GTACCTCAGTATTCTTTTTCAACATGTAGGGCAAGA...AGCAACATCCCATCTAAGCATTCCACACTGCAGGGAGGAGTGGTACTTAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR GCA 90 bp CCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGAAATTTCATAATCTGCTGACTCCTCCTCCTTaGCTGATTACAGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: PLTPDIGLENSSMKFHNLLTPPP*LITGVG
Trigger: CCCCACCCCTGTAATCAGGCAAGGAGGAGGAGTCAG...CAGATTATGAAATTTCATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CCA 90 bp CCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGAAATTTCATAATCTGTTAAACCCCCAGGGCTaGGACCTCCATTACTTGACT +
Preference number: 2 (lower is better)
Translates to: PLTPDIGLENSSMKFHNLLNPQG*DLHYLT
Trigger: AGTCAAGTAATGGAGGTCCCAGCCCTGGGGGTTTAA...CAGATTATGAAATTTCATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CCA 90 bp CCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGAAATTTCATAATCTGTTCCAAGACAAAGGATaGAGCAACATCCTGACATCT +
Preference number: 2 (lower is better)
Translates to: PLTPDIGLENSSMKFHNLFQDKG*SNILTS
Trigger: AGATGTCAGGATGTTGCTCCATCCTTTGTCTTGGAA...CAGATTATGAAATTTCATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR CCA 72 bp TGGGCACTTGCGGGCCCCGGCGGTGGGGTGAGGGCCTaGGAAGCCAGCTTGGGCCCGAGTGTGGTGGACAGG +
Preference number: 3 (lower is better)
Translates to: WALAGPGGGVRA*EASLGPSVVDR
Trigger: CCTGTCCACCACACTCGGGCCCAAGCTGGCTTCCCAGGCCCTCACCCCACCGCCGGGGCCCGCAAGTGCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR GCA 72 bp AGCTGCAGGCTGCGGTTGGCCTGCTCCAGGGATCGCTaGCGGCTCTCCAGGTCTTTGGAGCGCTGCTGCTCC +
Preference number: 3 (lower is better)
Translates to: SCRLRLACSRDR*RLSRSLERCCS
Trigger: GGAGCAGCAGCGCTCCAAAGACCTGGAGAGCCGGCAGCGATCCCTGGAGCAGGCCAACCGCAGCCTGCAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CAA 90 bp GGTCGCTGGGAAAGTGCAGGTCCAGAAGGGCATCTGAGGGCGGTGCAGGGGGCTCACTGGGCGGTTCCTTaGGGGAAGGTGCAGGGCCTC +
Preference number: 3 (lower is better)
Translates to: GRWESAGPEGHLRAVQGAHWAVP*GKVQGL
Trigger: GAGGCCCTGCACCTTCCCCAAAGGAACCGCCCAGTG...AGCCCCCTGCACCGCCCTCAGATGCCCTTCTGGACCTGCACTTTCCCAGCGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR GCA 72 bp CCTGCAGTTCTAGTTCCTGAATTCGGAGCTGCAGGCTaGGGTTGGCCTGCTCCAGGGATCGCTGCCGGCTCT +
Preference number: 3 (lower is better)
Translates to: PAVLVPEFGAAG*GWPAPGIAAGS
Trigger: AGAGCCGGCAGCGATCCCTGGAGCAGGCCAACCGCAGCCTGCAGCTCCGAATTCAGGAACTAGAACTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR CCA 72 bp CCTGCTCCAGGGATCGCTGCCGGCTCTCCAGGTCTTTaGAGCGCTGCTGCTCCTTCTGCAGCTTGCGGATAT +
Preference number: 3 (lower is better)
Translates to: PAPGIAAGSPGL*SAAAPSAACGY
Trigger: ATATCCGCAAGCTGCAGAAGGAGCAGCAGCGCTCCAAAGACCTGGAGAGCCGGCAGCGATCCCTGGAGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR CCA 72 bp GTTCTAGTTCCTGAATTCGGAGCTGCAGGCTGCGGTTaGCCTGCTCCAGGGATCGCTGCCGGCTCTCCAGGT +
Preference number: 3 (lower is better)
Translates to: VLVPEFGAAGCG*PAPGIAAGSPG
Trigger: ACCTGGAGAGCCGGCAGCGATCCCTGGAGCAGGCCAACCGCAGCCTGCAGCTCCGAATTCAGGAACTAGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR CCA 72 bp GTCAGAAGCCGAAGTCGTGGCCAAGGAAAGCAGCCCTaGAGTGGGAGGTACTGGCAGGCCATGGATCTGGGC +
Preference number: 3 (lower is better)
Translates to: VRSRSRGQGKQP*SGRYWQAMDLG
Trigger: GCCCAGATCCATGGCCTGCCAGTACCTCCCACTCCAGGGCTGCTTTCCTTGGCCACGACTTCGGCTTCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CAA 90 bp TGGGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCAGGGTTCATCACTGGGCGGTTCCTTaGGGGAAGGTGCAGGGCCTC +
Preference number: 3 (lower is better)
Translates to: WVSSSLLFLAWAEQGRVHHWAVP*GKVQGL
Trigger: GAGGCCCTGCACCTTCCCCAAAGGAACCGCCCAGTG...ATGAACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CAA 90 bp CCTCCTAGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCGCCTGGGAAGCCAGCTaGGGCCCGAGTGTGGTGGAC +
Preference number: 3 (lower is better)
Translates to: PPRLGQVGPRLRQGSLSTAWEAS*GPSVVD
Trigger: GTCCACCACACTCGGGCCCAAGCTGGCTTCCCAGGC...GGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCTAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR GCA 72 bp TTCCCAAACTGCCCCTCAAGGAAGAAGGCAGGACTCTaGCCAAGGGTGGGGGCCTCTCACTCCAGATATAGG +
Preference number: 3 (lower is better)
Translates to: FPNCPSRKKAGL*PRVGASHSRYR
Trigger: CCTATATCTGGAGTGAGAGGCCCCCACCCTTGGGCAGAGTCCTGCCTTCTTCCTTGAGGGGCAGTTTGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR CCA 72 bp AAATACCTGTGCTGGGCTGTTCCTATAGGGAAGGGGTaGGGCCTGGCTCCTCCATTCCTAGAAGGCCAGGAG +
Preference number: 3 (lower is better)
Translates to: KYLCWAVPIGKG*GLAPPFLEGQE
Trigger: CTCCTGGCCTTCTAGGAATGGAGGAGCCAGGCCCCACCCCTTCCCTATAGGAACAGCCCAGCACAGGTATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CAA 90 bp GAGGTACTGGCAGGCCATGGATCTGGGCCTGCAGTTCTAGTTCCTGAATTCGGATCTGACTCCTCCTCCTaGCCTGATTACAGGGGTGGG +
Preference number: 3 (lower is better)
Translates to: EVLAGHGSGPAVLVPEFGSDSSS*PDYRGG
Trigger: CCCACCCCTGTAATCAGGCAAGGAGGAGGAGTCAGA...TCCGAATTCAGGAACTAGAACTGCAGGCCCAGATCCATGGCCTGCCAGTACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CAA 90 bp CGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCTCCTTGCCTGATTGGGACCTCCATTACTaGACTCCTCTTCTGTGCCAG +
Preference number: 3 (lower is better)
Translates to: RFLWGRCRASSDSSSLPDWDLHY*TPLLCQ
Trigger: CTGGCACAGAAGAGGAGTCAAGTAATGGAGGTCCCA...ATCAGGCAAGGAGGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CAA 90 bp CGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCTCCTTGCCTGATCCAAAGCTGACAACCTaGGGTGTAGGTATGAGGGGT +
Preference number: 3 (lower is better)
Translates to: RFLWGRCRASSDSSSLPDPKLTT*GVGMRG
Trigger: ACCCCTCATACCTACACCCAAGGTTGTCAGCTTTGG...ATCAGGCAAGGAGGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CAA 90 bp TACCACTCCTCCCTGCAGTGTGGAATGCTTAGATGGGATGTTGCTGAGGGACAAAGATGGGTCTGCACCTaGAGCACCTCCCTGGGCACC +
Preference number: 3 (lower is better)
Translates to: YHSSLQCGMLRWDVAEGQRWVCT*STSLGT
Trigger: GGTGCCCAGGGAGGTGCTCAAGGTGCAGACCCATCT...TTGTCCCTCAGCAACATCCCATCTAAGCATTCCACACTGCAGGGAGGAGTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CAA 90 bp TGCTTAGATGGGATGTTGCTGAGGGACAAGGGTGGGGCTGTGATCTCCACAAGCATCTCCCGTTTGATGTaGGGCAGCTCAGCTGGGCAG +
Preference number: 3 (lower is better)
Translates to: CLDGMLLRDKGGAVISTSISRLM*GSSAGQ
Trigger: CTGCCCAGCTGAGCTGCCCAACATCAAACGGGAGAT...GCTTGTGGAGATCACAGCCCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CAA 90 bp CTTCTGTGCCAGGACGGACTAGACTGGTGGTTCCAAGACAAAGGATGGAGCAACTCTGACTCCTCCTCCTaGCCTGATTACAGGGGTGGG +
Preference number: 3 (lower is better)
Translates to: LLCQDGLDWWFQDKGWSNSDSSS*PDYRGG
Trigger: CCCACCCCTGTAATCAGGCAAGGAGGAGGAGTCAGA...GTTGCTCCATCCTTTGTCTTGGAACCACCAGTCTAGTCCGTCCTGGCACAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CAA 90 bp TACCACTCCTCCCTGCAGTGTGGAATGCTTAGATGGGATGTTGCTGAGGGACAACCTCACTTCTGTTCCTaGCCTGGGCAGAGCAGGGCA +
Preference number: 3 (lower is better)
Translates to: YHSSLQCGMLRWDVAEGQPHFCS*PGQSRA
Trigger: TGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGG...TTGTCCCTCAGCAACATCCCATCTAAGCATTCCACACTGCAGGGAGGAGTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CAA 90 bp GAGGTACTGGCAGGCCATGGATCTGGGCCTGCAGTTCTAGTTCCTGAATTCGGATGCTTAGATGGGATGTaGCTGAGGGACAAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: EVLAGHGSGPAVLVPEFGCLDGM*LRDKGG
Trigger: CCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCA...TCCGAATTCAGGAACTAGAACTGCAGGCCCAGATCCATGGCCTGCCAGTACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CAA 90 bp CTCGGTCTCAGAGATCTCCCGTTTGATGTTGGGCAGCTCAGCTGGGCAGGAGTTTGGTGTGGCCACGCCTaGACTACTGTACACATCAAG +
Preference number: 3 (lower is better)
Translates to: LGLRDLPFDVGQLSWAGVWCGHA*TTVHIK
Trigger: CTTGATGTGTACAGTAGTCAAGGCGTGGCCACACCA...AACTCCTGCCCAGCTGAGCTGCCCAACATCAAACGGGAGATCTCTGAGACCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR-3UTR CAA 90 bp AGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGGGTGCTTAGATGGGATGTaGCTGAGGGACAAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: RGYNMLLQPSSKLLPCWGCLDGM*LRDKGG
Trigger: CCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCA...CCCCCAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CAA 90 bp CCTCCTAGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCTCAGAGATCTCCCGTTaGATGTTGGGCAGCTCAGCT +
Preference number: 3 (lower is better)
Translates to: PPRLGQVGPRLRQGSLSTSEISR*MLGSSA
Trigger: AGCTGAGCTGCCCAACATCAAACGGGAGATCTCTGA...GGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCTAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR GCA 72 bp CAGGGCTGGGACCTCCATTACTTGACTCCTCTTCTGTaGCAGGACGGACTAGACTGGTGGTTCCAAGACAAA +
Preference number: 3 (lower is better)
Translates to: QGWDLHYLTPLL*QDGLDWWFQDK
Trigger: TTTGTCTTGGAACCACCAGTCTAGTCCGTCCTGGCACAGAAGAGGAGTCAAGTAATGGAGGTCCCAGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR CCA 72 bp AAGTACCACTCCTCCCTGCAGTGTGGAATGCTTAGATaGGATGTTGCTGAGGGACAAGGGTGGGGCTGTGAT +
Preference number: 3 (lower is better)
Translates to: KYHSSLQCGMLR*DVAEGQGWGCD
Trigger: ATCACAGCCCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCATTCCACACTGCAGGGAGGAGTGGTACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR TCA 72 bp GAGTTGCTGACAGTGATGGCTGGTGTGGCCACGCCTTaGCTACTGTACACATCAAGCAGATTCCCTGACACA +
Preference number: 3 (lower is better)
Translates to: ELLTVMAGVATP*LLYTSSRFPDT
Trigger: TGTGTCAGGGAATCTGCTTGATGTGTACAGTAGTCAAGGCGTGGCCACACCAGCCATCACTGTCAGCAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR CCA 72 bp TTGACTCCTCTTCTGTGCCAGGACGGACTAGACTGGTaGTTCCAAGACAAAGGATGGAGCAACATCCTGACA +
Preference number: 3 (lower is better)
Translates to: LTPLLCQDGLDW*FQDKGWSNILT
Trigger: TGTCAGGATGTTGCTCCATCCTTTGTCTTGGAACCACCAGTCTAGTCCGTCCTGGCACAGAAGAGGAGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR CCA 72 bp TACTTGACTCCTCTTCTGTGCCAGGACGGACTAGACTaGTGGTTCCAAGACAAAGGATGGAGCAACATCCTG +
Preference number: 3 (lower is better)
Translates to: YLTPLLCQDGLD*WFQDKGWSNIL
Trigger: CAGGATGTTGCTCCATCCTTTGTCTTGGAACCACCAGTCTAGTCCGTCCTGGCACAGAAGAGGAGTCAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR-3UTR CAA 90 bp GTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGGGAAGGCAGAGTGCCCAGTTCCTaGATCCTGTCGTTAATGTTG +
Preference number: 3 (lower is better)
Translates to: VQYAFTTLLQASALLGEGRVPSS*ILSLML
Trigger: CAACATTAACGACAGGATCAAGGAACTGGGCACTCT...GCCTTCCCCCAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR TCA 90 bp GGCAGGCAGTGGCTGGGCACTTGCGGGCCCCGGCGGTGGGGTGAGGGCCTGGGAGGGACCTCCATTACTTaGCTCCTCTTCTGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GRQWLGTCGPRRWGEGLGGTSIT*LLFCAR
Trigger: CCTGGCACAGAAGAGGAGTCAAGTAATGGAGGTCCC...TCCCAGGCCCTCACCCCACCGCCGGGGCCCGCAAGTGCCCAGCCACTGCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493583.5
3UTR CAA 72 bp GAGCTGGACCCGATGGTGAGCAGCGCCATGGGGCTGTaGGGCGCACTGCCTGTGGGGCCGGTAGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: ELDPMVSSAMGL*GALPVGPVVWA
Trigger: TGCCCACACTACCGGCCCCACAGGCAGTGCGCCCAACAGCCCCATGGCGCTGCTCACCATCGGGTCCAGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR GCA 90 bp CTCCCTTTCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACCGCTCACGCCTCTCCTaGTCCTGCGCCTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LPFPGDLARTVPRGQGRDRSRLS*SCAWAR
Trigger: GCGGGCCCAGGCGCAGGAGCAGGAGAGGCGTGAGCG...GTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGAAAGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp CTGAGCAGGGGGTGGACGGCTCAATGTGTGGCCCCCAGCAGAGACGCCAACCACTCACCTGGGCAAGGATaGGTCCCACAGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LSRGWTAQCVAPSRDANHSPGQG*VPQGQG
Trigger: CCCCTGCCCCTGTGGGACTCATCCTTGCCCAGGTGA...GTGGTTGGCGTCTCTGCTGGGGGCCACACATTGAGCCGTCCACCCCCTGCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CCA 90 bp GGGAAGGGGCTGGGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCTCAGGGGCAGGCAGTaGCTGGGCACTTGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: GKGLGLILTSVPCLGRAGLRGRQ*LGTCGP
Trigger: GGGCCCGCAAGTGCCCAGCCACTGCCTGCCCCTGAG...CCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACCCAGCCCCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp GTGAGGGCCTGGGAAGCCAGCTTGGGCCCGAGTGTGGTGGACAGGTACTGTTTCGTGGGGCCGGTAGTGTaGGCAGCCTCAGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VRAWEASLGPSVVDRYCFVGPVV*AASGAG
Trigger: GCCTGCCCCTGAGGCTGCCCACACTACCGGCCCCAC...GAAACAGTACCTGTCCACCACACTCGGGCCCAAGCTGGCTTCCCAGGCCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR TCA 90 bp CTGAGCAGGGGGTGGACGGCTCAATGTGTGGCCCCCAGCAGAGACGCCAACCACGATGGGTCTGCACCTTaGGCACCTCCCTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: LSRGWTAQCVAPSRDANHDGSAP*APPWAP
Trigger: AGGTGCCCAGGGAGGTGCTCAAGGTGCAGACCCATC...GTGGTTGGCGTCTCTGCTGGGGGCCACACATTGAGCCGTCCACCCCCTGCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR GCA 90 bp CTCCCTTTCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACAGGCTGCGGTTGGCCTaGTCCAGGGATCGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: LPFPGDLARTVPRGQGRDRLRLA*SRDRCR
Trigger: CCGGCAGCGATCCCTGGAGCAGGCCAACCGCAGCCT...GTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGAAAGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp TGCGGTTGGCCTGCTCCAGGGATCGCTGCCGGCTCTCCAGGTCTTTGGAGCGCTCCCTACATGGAACGTTaGTGCGCCTGGCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: CGWPAPGIAAGSPGLWSAPYMER*CAWPAL
Trigger: GAGGGCAGGCCAGGCGCAGCAACGTTCCATGTAGGG...AGCGCTCCAAAGACCTGGAGAGCCGGCAGCGATCCCTGGAGCAGGCCAACCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CCA 90 bp TGGCCTTGGAGACAGCAGGGGACACTGAAGAGAGCAGGGGATCGGAGGCAGCCCTCCTGCTCCTGCGCCTaGGCCCGCATTAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WPWRQQGTLKRAGDRRQPSCSCA*ARISCC
Trigger: GCAGCAGCTAATGCGGGCCCAGGCGCAGGAGCAGGA...GGGCTGCCTCCGATCCCCTGCTCTCTTCAGTGTCCCCTGCTGTCTCCAAGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR TCA 90 bp TCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACCTCATCCAGCTGGACCCGATGGTaGGCAGCGCCATGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SQETWLGQSLGDRVETSSSWTRW*AAPWGC
Trigger: ACAGCCCCATGGCGCTGCTCACCATCGGGTCCAGCT...GGATGAGGTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp TGCGGTTGGCCTGCTCCAGGGATCGCTGCCGGCTCTCCAGGTCTTTGGAGCGCTGACAGCAGGGGACACTaGAGAGAGCAGGGGATCGGA +
Preference number: 4 (lower is better)
Translates to: CGWPAPGIAAGSPGLWSADSRGH*REQGIG
Trigger: TCCGATCCCCTGCTCTCTTCAGTGTCCCCTGCTGTC...AGCGCTCCAAAGACCTGGAGAGCCGGCAGCGATCCCTGGAGCAGGCCAACCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR TCA 90 bp GTGAGGGCCTGGGAAGCCAGCTTGGGCCCGAGTGTGGTGGACAGGTACTGTTTCGTCCCAGGGGAGGGGTaGGGCCTGATCAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: VRAWEASLGPSVVDRYCFVPGEG*GLIRTP
Trigger: AGGAGTCCTGATCAGGCCTCACCCCTCCCCTGGGAC...GAAACAGTACCTGTCCACCACACTCGGGCCCAAGCTGGCTTCCCAGGCCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR GCA 90 bp TGCGGTTGGCCTGCTCCAGGGATCGCTGCCGGCTCTCCAGGTCTTTGGAGCGCTTTGCTGCGCCTGGCCTaGCCTCCTCCTCAATGTCCA +
Preference number: 4 (lower is better)
Translates to: CGWPAPGIAAGSPGLWSALLRLA*PPPQCP
Trigger: TGGACATTGAGGAGGAGGGCAGGCCAGGCGCAGCAA...AGCGCTCCAAAGACCTGGAGAGCCGGCAGCGATCCCTGGAGCAGGCCAACCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CCA 90 bp CGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCTCCTTGCCTGATGAGGGCCCTCCGCGCTaGCCTCTACGCCATCCCGAG +
Preference number: 4 (lower is better)
Translates to: RFLWGRCRASSDSSSLPDEGPPR*PLRHPE
Trigger: CTCGGGATGGCGTAGAGGCCAGCGCGGAGGGCCCTC...ATCAGGCAAGGAGGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp ACCTGCACTGGGCGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCTCCTGCTCCTGCGCCTaGGCCCGCATTAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TCTGRFLWGRCRASSDSSSCSCA*ARISCC
Trigger: GCAGCAGCTAATGCGGGCCCAGGCGCAGGAGCAGGA...GGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCGCCCAGTGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR CAA 72 bp GCCTGCTCCAGGGATCGCTGCCGGCTCTCCAGGTCTTaGGAGCGCTGCTGCTCCTTCTGCAGCTTGCGGATA +
Preference number: 4 (lower is better)
Translates to: ACSRDRCRLSRS*ERCCSFCSLRI
Trigger: TATCCGCAAGCTGCAGAAGGAGCAGCAGCGCTCCAAAGACCTGGAGAGCCGGCAGCGATCCCTGGAGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR TCA 90 bp TTCCAGCGCATCTCCGGGTCACTGGACTTAGGGATGAGAGTGCCCAGTTCCTTGGCTGGTTCGGCCGCATaGGACATGACGCCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: FQRISGSLDLGMRVPSSLAGSAA*DMTPGP
Trigger: GGGGCCGGGCGTCATGTCTCATGCGGCCGAACCAGC...CAAGGAACTGGGCACTCTCATCCCTAAGTCCAGTGACCCGGAGATGCGCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR TCA 90 bp GGGAAGGGGCTGGGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCTCCTCCTCCTTGCCTaGTTACAGGGGTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GKGLGLILTSVPCLGRAGLLLLA*LQGWGL
Trigger: CAGGCCCCACCCCTGTAATCAGGCAAGGAGGAGGAG...CCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACCCAGCCCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp GCTGCCGGCTCTCCAGGTCTTTGGAGCGCTGCTGCTCCTTCTGCAGCTTGCGGAGCCCGCATTAGCTGCTaGCGCAGCAAGACCCTCGAT +
Preference number: 4 (lower is better)
Translates to: AAGSPGLWSAAAPSAACGARISC*RSKTLD
Trigger: ATCGAGGGTCTTGCTGCGGCAGCAGCTAATGCGGGC...TCCGCAAGCTGCAGAAGGAGCAGCAGCGCTCCAAAGACCTGGAGAGCCGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR GCA 90 bp ACCTGCACTGGGCGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCTGGGCCCGCATTAGCTaGTGCCGCAGCAAGACCCTC +
Preference number: 4 (lower is better)
Translates to: TCTGRFLWGRCRASSDSSWARIS*CRSKTL
Trigger: GAGGGTCTTGCTGCGGCAGCAGCTAATGCGGGCCCA...GGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCGCCCAGTGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp GGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCAGGGTTCATGGCGCCTCTCCTGCTCCTaGGCCTGGGCCCGCATTAGC +
Preference number: 4 (lower is better)
Translates to: GLILTSVPCLGRAGQGSWRLSCS*AWARIS
Trigger: GCTAATGCGGGCCCAGGCGCAGGAGCAGGAGAGGCG...CCATGAACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp GGGAAGGGGCTGGGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGAGGTACTGTTTCACCTaGTGCCGGCGCGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GKGLGLILTSVPCLGRAGRYCFT*CRRACC
Trigger: GCAGCAGGCGCGCCGGCAGCAGGTGAAACAGTACCT...CCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACCCAGCCCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp CGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCTCCTTGCCTGATAGGCTGCGGTTGGCCTaGTCCAGGGATCGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: RFLWGRCRASSDSSSLPDRLRLA*SRDRCR
Trigger: CCGGCAGCGATCCCTGGAGCAGGCCAACCGCAGCCT...ATCAGGCAAGGAGGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp AGTATACCCTCCATGGGGCCTGGCCCCAGCAATCCAAAGCTGACAACCTTGGGTGTGGGGCCGGTAGTGTaGGCAGCCTCAGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SIPSMGPGPSNPKLTTLGVGPVV*AASGAG
Trigger: GCCTGCCCCTGAGGCTGCCCACACTACCGGCCCCAC...ACCCAAGGTTGTCAGCTTTGGATTGCTGGGGCCAGGCCCCATGGAGGGTATACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp CAGAGCCCTCCTAGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAGCGCCATGGGGCTGTTaGGCGCACTGCCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: QSPPRLGQVGPRLRQGSLAPWGC*AHCLWG
Trigger: GCCCCACAGGCAGTGCGCCCAACAGCCCCATGGCGC...TAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCTAGGAGGGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp CTCCCTTTCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACGGAGCTGCAGTCCTGTaGTGCCTCCGGGCAGATAGC +
Preference number: 4 (lower is better)
Translates to: LPFPGDLARTVPRGQGRDGAAVL*CLRADS
Trigger: GCTATCTGCCCGGAGGCACCACAGGACTGCAGCTCC...GTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGAAAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp TGGGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCAGGGTTCATTTCAGGCTGAGCAGCTaGGCCGAGTCGGCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: WVSSSLLFLAWAEQGRVHFRLSS*AESAGL
Trigger: CAGGCCGGCCGACTCGGCTCAGCTGCTCAGCCTGAA...ATGAACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp CTCGGTCTCAGAGATCTCCCGTTTGATGTTGGGCAGCTCAGCTGGGCAGGAGTTTTCAGGCTGAGCAGCTaGGCCGAGTCGGCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: LGLRDLPFDVGQLSWAGVFRLSS*AESAGL
Trigger: CAGGCCGGCCGACTCGGCTCAGCTGCTCAGCCTGAA...AACTCCTGCCCAGCTGAGCTGCCCAACATCAAACGGGAGATCTCTGAGACCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR TCA 90 bp GGTCGCTGGGAAAGTGCAGGTCCAGAAGGGCATCTGAGGGCGGTGCAGGGGGCTGGTGTGGCCACGCCTTaGCTACTGTACACATCAAGC +
Preference number: 4 (lower is better)
Translates to: GRWESAGPEGHLRAVQGAGVATP*LLYTSS
Trigger: GCTTGATGTGTACAGTAGTCAAGGCGTGGCCACACC...AGCCCCCTGCACCGCCCTCAGATGCCCTTCTGGACCTGCACTTTCCCAGCGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR TCA 90 bp GGGAAGGGGCTGGGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCCAGCTGCTCTGGCTTaGGGCTGTCAGAAGCCGAAG +
Preference number: 4 (lower is better)
Translates to: GKGLGLILTSVPCLGRAGPAALA*GCQKPK
Trigger: CTTCGGCTTCTGACAGCCTCAAGCCAGAGCAGCTGG...CCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACCCAGCCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp TCCCCTTCCCCAAGAGCAAGGTTGGCTCAGAGCCCTCCTAGGTTAGGTCAGGTTGTCCAGAAGGGCATCTaGGGGCGGTGCAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SPSPRARLAQSPPRLGQVVQKGI*GRCRGL
Trigger: CAGCCCCCTGCACCGCCCTCAGATGCCCTTCTGGAC...AACCTGACCTAACCTAGGAGGGCTCTGAGCCAACCTTGCTCTTGGGGAAGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp AGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGGGCGCTCACGCCTCTCCTaGTCCTGCGCCTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: RGYNMLLQPSSKLLPCWGRSRLS*SCAWAR
Trigger: GCGGGCCCAGGCGCAGGAGCAGGAGAGGCGTGAGCG...CCCCCAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp TCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACCTCATCCAAGAAGGCAGGACTCTaGCCAAGGGTGGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SQETWLGQSLGDRVETSSKKAGL*PRVGAS
Trigger: AGAGGCCCCCACCCTTGGGCAGAGTCCTGCCTTCTT...GGATGAGGTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp TGGCCTTGGAGACAGCAGGGGACACTGAAGAGAGCAGGGGATCGGAGGCAGCCCTACGCCATCCCGAGCTaGTTCGGCCGCATGAGACAT +
Preference number: 4 (lower is better)
Translates to: WPWRQQGTLKRAGDRRQPYAIPS*FGRMRH
Trigger: ATGTCTCATGCGGCCGAACCAGCTCGGGATGGCGTA...GGGCTGCCTCCGATCCCCTGCTCTCTTCAGTGTCCCCTGCTGTCTCCAAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CCA 90 bp ACCTGCACTGGGCGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCTGCAGAGAGTGTAGCTaGGGTGGCTGGTGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: TCTGRFLWGRCRASSDSSCRECS*GGWCGL
Trigger: CAGGCCACACCAGCCACCCCAGCTACACTCTCTGCA...GGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCGCCCAGTGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315869.8
CDS-3UTR CCA 90 bp ACCTGCACTGGGCGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCTGGAGTGGGAGGTACTaGCAGGCCATGGATCTGGGC +
Preference number: 4 (lower is better)
Translates to: TCTGRFLWGRCRASSDSSWSGRY*QAMDLG
Trigger: GCCCAGATCCATGGCCTGCCAGTACCTCCCACTCCA...GGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCGCCCAGTGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp GGGAAGGGGCTGGGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCCCAGGGGAAGGGGCTaGGTCTCATCCTCACTTCTG +
Preference number: 4 (lower is better)
Translates to: GKGLGLILTSVPCLGRAGPRGRG*VSSSLL
Trigger: CAGAAGTGAGGATGAGACCCAGCCCCTTCCCCTGGG...CCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACCCAGCCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp TCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACCTCATCCCCTATAGGGAAGGGGTaGGGCCTGGCTCCTCCATTC +
Preference number: 4 (lower is better)
Translates to: SQETWLGQSLGDRVETSSPIGKG*GLAPPF
Trigger: GAATGGAGGAGCCAGGCCCCACCCCTTCCCTATAGG...GGATGAGGTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp CTTCTGTGCCAGGACGGACTAGACTGGTGGTTCCAAGACAAAGGATGGAGCAACGCTGGTTCGGCCGCATaGGACATGACGCCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: LLCQDGLDWWFQDKGWSNAGSAA*DMTPGP
Trigger: GGGGCCGGGCGTCATGTCTCATGCGGCCGAACCAGC...GTTGCTCCATCCTTTGTCTTGGAACCACCAGTCTAGTCCGTCCTGGCACAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp CAGAGCCCTCCTAGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAGTCCCAGGGGAGGGGTaGGGCCTGATCAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: QSPPRLGQVGPRLRQGSLVPGEG*GLIRTP
Trigger: AGGAGTCCTGATCAGGCCTCACCCCTCCCCTGGGAC...TAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCTAGGAGGGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp TCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACCTCATCCCCAGCCTTCTCCTTCTaGAATACCTGCACTGGGCGG +
Preference number: 4 (lower is better)
Translates to: SQETWLGQSLGDRVETSSPAFSF*NTCTGR
Trigger: CCGCCCAGTGCAGGTATTTCAGAAGGAGAAGGCTGG...GGATGAGGTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp GTGAGGGCCTGGGAAGCCAGCTTGGGCCCGAGTGTGGTGGACAGGTACTGTTTCCCTCCTCCAAGCTTCTaGCTTGCTGGGGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: VRAWEASLGPSVVDRYCFPPPSF*LAGGRL
Trigger: AAGCCTTCCCCCAGCAAGGCAGAAGCTTGGAGGAGG...GAAACAGTACCTGTCCACCACACTCGGGCCCAAGCTGGCTTCCCAGGCCCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CCA 90 bp AGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCACTCCTGAGGGCCCTCCGCGCTaGCCTCTACGCCATCCCGAG +
Preference number: 4 (lower is better)
Translates to: RLGQVGPRLRQGSLSTTPEGPPR*PLRHPE
Trigger: CTCGGGATGGCGTAGAGGCCAGCGCGGAGGGCCCTC...AGGAGTGGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp AGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGGGGCGCCATGGGGCTGTTaGGCGCACTGCCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RGYNMLLQPSSKLLPCWGAPWGC*AHCLWG
Trigger: GCCCCACAGGCAGTGCGCCCAACAGCCCCATGGCGC...CCCCCAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp GTGAGGGCCTGGGAAGCCAGCTTGGGCCCGAGTGTGGTGGACAGGTACTGTTTCGGCTCTCCAGGTCTTTaGAGCGCTGCTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VRAWEASLGPSVVDRYCFGSPGL*SAAAPS
Trigger: AGAAGGAGCAGCAGCGCTCCAAAGACCTGGAGAGCC...GAAACAGTACCTGTCCACCACACTCGGGCCCAAGCTGGCTTCCCAGGCCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CCA 90 bp CTCCCTTTCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACCAAGGAAAGCAGCCCTaGAGTGGGAGGTACTGGCAG +
Preference number: 4 (lower is better)
Translates to: LPFPGDLARTVPRGQGRDQGKQP*SGRYWQ
Trigger: CTGCCAGTACCTCCCACTCCAGGGCTGCTTTCCTTG...GTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGAAAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp CTCCCTTTCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACTCAGTATACCCTCCATaGGGCCTGGCCCCAGCAATC +
Preference number: 4 (lower is better)
Translates to: LPFPGDLARTVPRGQGRDSVYPP*GLAPAI
Trigger: GATTGCTGGGGCCAGGCCCCATGGAGGGTATACTGA...GTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGAAAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp CGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCTCCTTGCCTGATACATGGCAGGGGTCCTaGAGCCCCCTTGAGCGAAGG +
Preference number: 4 (lower is better)
Translates to: RFLWGRCRASSDSSSLPDTWQGS*SPLERR
Trigger: CCTTCGCTCAAGGGGGCTCCAGGACCCCTGCCATGT...ATCAGGCAAGGAGGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR TCA 90 bp TCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACCTCATCCCAGAGATCTCCCGTTTaGTGTTGGGCAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SQETWLGQSLGDRVETSSQRSPV*CWAAQL
Trigger: CAGCTGAGCTGCCCAACATCAAACGGGAGATCTCTG...GGATGAGGTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp CTCCCTTTCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACGGGACCTCCATTACTTaGCTCCTCTTCTGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPFPGDLARTVPRGQGRDGTSIT*LLFCAR
Trigger: CCTGGCACAGAAGAGGAGTCAAGTAATGGAGGTCCC...GTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGAAAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp AGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCACTCCTCCGAGTCGGCCGGCCTaGGCTCCTCCAACAGCACGA +
Preference number: 4 (lower is better)
Translates to: RLGQVGPRLRQGSLSTTPPSRPA*APPTAR
Trigger: TCGTGCTGTTGGAGGAGCGCAGGCCGGCCGACTCGG...AGGAGTGGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp AGTATACCCTCCATGGGGCCTGGCCCCAGCAATCCAAAGCTGACAACCTTGGGTTACTGTTTCACCTGCTaGCGGCGCGCCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SIPSMGPGPSNPKLTTLGYCFTC*RRACCR
Trigger: CCTGCAGCAGGCGCGCCGGCAGCAGGTGAAACAGTA...ACCCAAGGTTGTCAGCTTTGGATTGCTGGGGCCAGGCCCCATGGAGGGTATACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp CAGAGCCCTCCTAGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTATACTGTTTCACCTGCTaGCGGCGCGCCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QSPPRLGQVGPRLRQGSLYCFTC*RRACCR
Trigger: CCTGCAGCAGGCGCGCCGGCAGCAGGTGAAACAGTA...TAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCTAGGAGGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp ACCTGCACTGGGCGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCAGGTCTTTGGAGCGCTaGTGCTCCTTCTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TCTGRFLWGRCRASSDSSRSLER*CSFCSL
Trigger: CAAGCTGCAGAAGGAGCAGCAGCGCTCCAAAGACCT...GGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCGCCCAGTGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp ACCTGCACTGGGCGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCTGGTCGCTGGGAAAGTaGAGGTCCAGAAGGGCATCT +
Preference number: 4 (lower is better)
Translates to: TCTGRFLWGRCRASSDSSWSLGK*RSRRAS
Trigger: AGATGCCCTTCTGGACCTGCACTTTCCCAGCGACCA...GGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCGCCCAGTGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp GGTCGCTGGGAAAGTGCAGGTCCAGAAGGGCATCTGAGGGCGGTGCAGGGGGCTATCACCTTCCCAAACTaGCCCTCAAGGAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GRWESAGPEGHLRAVQGAITFPN*PSRKKA
Trigger: TGCCTTCTTCCTTGAGGGGCAGTTTGGGAAGGTGAT...AGCCCCCTGCACCGCCCTCAGATGCCCTTCTGGACCTGCACTTTCCCAGCGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CCA 90 bp CTACTGTACACATCAAGCAGATTCCCTGACACAGGCAGCGTGCTGGGGAGCTGCGGACGGCTCAATGTGTaGCCCCCAGCAGAGACGCCA +
Preference number: 4 (lower is better)
Translates to: LLYTSSRFPDTGSVLGSCGRLNV*PPAETP
Trigger: TGGCGTCTCTGCTGGGGGCCACACATTGAGCCGTCC...GCAGCTCCCCAGCACGCTGCCTGTGTCAGGGAATCTGCTTGATGTGTACAGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CCA 90 bp GTGAGGGCCTGGGAAGCCAGCTTGGGCCCGAGTGTGGTGGACAGGTACTGTTTCTGGGCCCGAGTGTGGTaGACAGGTACTGTTTCACCT +
Preference number: 4 (lower is better)
Translates to: VRAWEASLGPSVVDRYCFWARVW*TGTVSP
Trigger: AGGTGAAACAGTACCTGTCCACCACACTCGGGCCCA...GAAACAGTACCTGTCCACCACACTCGGGCCCAAGCTGGCTTCCCAGGCCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CCA 90 bp CAGAGCCCTCCTAGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTACCTGGGAAGCCAGCTTaGGCCCGAGTGTGGTGGACA +
Preference number: 4 (lower is better)
Translates to: QSPPRLGQVGPRLRQGSLPGKPA*ARVWWT
Trigger: TGTCCACCACACTCGGGCCCAAGCTGGCTTCCCAGG...TAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCTAGGAGGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp CGGACTAGACTGGTGGTTCCAAGACAAAGGATGGAGCAACATCCTGACATCTCCCTCAGGGGCAGGCAGTaGCTGGGCACTTGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: RTRLVVPRQRMEQHPDISLRGRQ*LGTCGP
Trigger: GGGCCCGCAAGTGCCCAGCCACTGCCTGCCCCTGAG...GGAGATGTCAGGATGTTGCTCCATCCTTTGTCTTGGAACCACCAGTCTAGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp GGACTCTGCCCAAGGGTGGGGGCCTCTCACTCCAGATATAGGTCTGGAAAATTCCCCAGGTCCCCCAGGTaGTCGCTGGGAAAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GLCPRVGASHSRYRSGKFPRSPR*SLGKCR
Trigger: CCTGCACTTTCCCAGCGACCACCTGGGGGACCTGGG...GAATTTTCCAGACCTATATCTGGAGTGAGAGGCCCCCACCCTTGGGCAGAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp CTCCTCAATGTCCAGCTGCTCTGGCTTGAGGCTGTCAGAAGCCGAAGTCGTGGCGGGCCTCATCCTGACTaGTCCTCCTTTCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LLNVQLLWLEAVRSRSRGGPHPD*SSFPGW
Trigger: CCACCCAGGAAAGGAGGACCAGTCAGGATGAGGCCC...GCCACGACTTCGGCTTCTGACAGCCTCAAGCCAGAGCAGCTGGACATTGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CCA 90 bp TCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACCTCATCCTCTCCTTCCCTCACCTaGGCAAGGATGAGTCCCACA +
Preference number: 4 (lower is better)
Translates to: SQETWLGQSLGDRVETSSSPSLT*ARMSPT
Trigger: TGTGGGACTCATCCTTGCCCAGGTGAGGGAAGGAGA...GGATGAGGTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp TCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACCTCATCCGTGGGGAACAGAGGTTaGGGTGGCCTAGATTCTCAG +
Preference number: 4 (lower is better)
Translates to: SQETWLGQSLGDRVETSSVGNRG*GGLDSQ
Trigger: CTGAGAATCTAGGCCACCCCAACCTCTGTTCCCCAC...GGATGAGGTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp CTACTGTACACATCAAGCAGATTCCCTGACACAGGCAGCGTGCTGGGGAGCTGCGTCGGGGAGATGGGATaGGCTGTGAGTCATCCCCCG +
Preference number: 4 (lower is better)
Translates to: LLYTSSRFPDTGSVLGSCVGEMG*AVSHPP
Trigger: CGGGGGATGACTCACAGCCCATCCCATCTCCCCGAC...GCAGCTCCCCAGCACGCTGCCTGTGTCAGGGAATCTGCTTGATGTGTACAGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR TCA 90 bp CCTCCTAGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCGATGGGTCTGCACCTTaGGCACCTCCCTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: PPRLGQVGPRLRQGSLSTDGSAP*APPWAP
Trigger: AGGTGCCCAGGGAGGTGCTCAAGGTGCAGACCCATC...GGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCTAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp AGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCACTCCTAGCTGGACCCGATGGTaGGCAGCGCCATGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RLGQVGPRLRQGSLSTTPSWTRW*AAPWGC
Trigger: ACAGCCCCATGGCGCTGCTCACCATCGGGTCCAGCT...AGGAGTGGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp TCCTGTGGTGCCTCCGGGCAGATAGCTGAGCATTTCATCATTGTAACTGGACTCGTCCAGAAGGGCATCTaGGGGCGGTGCAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SCGASGQIAEHFIIVTGLVQKGI*GRCRGL
Trigger: CAGCCCCCTGCACCGCCCTCAGATGCCCTTCTGGAC...GAGTCCAGTTACAATGATGAAATGCTCAGCTATCTGCCCGGAGGCACCACAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR TCA 90 bp TGGGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCAGGGTTCATGACAGCAGGGGACACTaGAGAGAGCAGGGGATCGGA +
Preference number: 4 (lower is better)
Translates to: WVSSSLLFLAWAEQGRVHDSRGH*REQGIG
Trigger: TCCGATCCCCTGCTCTCTTCAGTGTCCCCTGCTGTC...ATGAACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp CCTCCTAGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCCCAGGGGGCAGGCCCTaGTCTCATGTCCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PPRLGQVGPRLRQGSLSTPGGRP*SHVLLQ
Trigger: CTGGAGAAGGACATGAGATCAGGGCCTGCCCCCTGG...GGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCTAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp AGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCACTCCTTCACCTGGGCAAGGATaGGTCCCACAGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RLGQVGPRLRQGSLSTTPSPGQG*VPQGQG
Trigger: CCCCTGCCCCTGTGGGACTCATCCTTGCCCAGGTGA...AGGAGTGGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp TACCACTCCTCCCTGCAGTGTGGAATGCTTAGATGGGATGTTGCTGAGGGACAACCGAGTCGGCCGGCCTaGGCTCCTCCAACAGCACGA +
Preference number: 4 (lower is better)
Translates to: YHSSLQCGMLRWDVAEGQPSRPA*APPTAR
Trigger: TCGTGCTGTTGGAGGAGCGCAGGCCGGCCGACTCGG...TTGTCCCTCAGCAACATCCCATCTAAGCATTCCACACTGCAGGGAGGAGTGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp TGCTTAGATGGGATGTTGCTGAGGGACAAGGGTGGGGCTGTGATCTCCACAAGCTGGGCCCGCATTAGCTaGTGCCGCAGCAAGACCCTC +
Preference number: 4 (lower is better)
Translates to: CLDGMLLRDKGGAVISTSWARIS*CRSKTL
Trigger: GAGGGTCTTGCTGCGGCAGCAGCTAATGCGGGCCCA...GCTTGTGGAGATCACAGCCCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp TGCTTAGATGGGATGTTGCTGAGGGACAAGGGTGGGGCTGTGATCTCCACAAGCAGGTACTGTTTCACCTaGTGCCGGCGCGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CLDGMLLRDKGGAVISTSRYCFT*CRRACC
Trigger: GCAGCAGGCGCGCCGGCAGCAGGTGAAACAGTACCT...GCTTGTGGAGATCACAGCCCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp CCTCCTAGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCCCCTACATGGAACGTTaGTGCGCCTGGCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: PPRLGQVGPRLRQGSLSTPYMER*CAWPAL
Trigger: GAGGGCAGGCCAGGCGCAGCAACGTTCCATGTAGGG...GGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCTAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp TCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACCTCATCCTTGACTCCTCTTCTGTaGCAGGACGGACTAGACTGG +
Preference number: 4 (lower is better)
Translates to: SQETWLGQSLGDRVETSSLTPLL*QDGLDW
Trigger: CCAGTCTAGTCCGTCCTGGCACAGAAGAGGAGTCAA...GGATGAGGTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp CCTCCTAGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCCACCTGAGCAGGGGGTaGACGGCTCAATGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: PPRLGQVGPRLRQGSLSTHLSRG*TAQCVA
Trigger: GGCCACACATTGAGCCGTCCACCCCCTGCTCAGGTG...GGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCTAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp GGACTCTGCCCAAGGGTGGGGGCCTCTCACTCCAGATATAGGTCTGGAAAATTCGGAGCTGCAGTCCTGTaGTGCCTCCGGGCAGATAGC +
Preference number: 4 (lower is better)
Translates to: GLCPRVGASHSRYRSGKFGAAVL*CLRADS
Trigger: GCTATCTGCCCGGAGGCACCACAGGACTGCAGCTCC...GAATTTTCCAGACCTATATCTGGAGTGAGAGGCCCCCACCCTTGGGCAGAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp TGCTTAGATGGGATGTTGCTGAGGGACAAGGGTGGGGCTGTGATCTCCACAAGCACACAGGCAGCGTGCTaGGGAGCTGCAGTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: CLDGMLLRDKGGAVISTSTQAAC*GAAVLW
Trigger: CCACAGGACTGCAGCTCCCCAGCACGCTGCCTGTGT...GCTTGTGGAGATCACAGCCCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp GGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCAGGGTTCATGGGGCAGGCCATGGATCTaGGCCTGCAGTTCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: GLILTSVPCLGRAGQGSWGRPWI*ACSSSS
Trigger: GGAACTAGAACTGCAGGCCCAGATCCATGGCCTGCC...CCATGAACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp CGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCTCCTTGCCTGATCAGAAGCCGAAGTCGTaGCCAAGGAAAGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: RFLWGRCRASSDSSSLPDQKPKS*PRKAAL
Trigger: CAGGGCTGCTTTCCTTGGCCACGACTTCGGCTTCTG...ATCAGGCAAGGAGGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp AGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCACTCCTCCCAGGTCCCCCAGGTaGTCGCTGGGAAAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RLGQVGPRLRQGSLSTTPPRSPR*SLGKCR
Trigger: CCTGCACTTTCCCAGCGACCACCTGGGGGACCTGGG...AGGAGTGGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp TGGGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCAGGGTTCATACTGGGCGGTTCCTTTaGGGAAGGTGCAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: WVSSSLLFLAWAEQGRVHTGRFL*GRCRAS
Trigger: TGAGGCCCTGCACCTTCCCCAAAGGAACCGCCCAGT...ATGAACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp GCTGCCGGCTCTCCAGGTCTTTGGAGCGCTGCTGCTCCTTCTGCAGCTTGCGGAGACGGACTAGACTGGTaGTTCCAAGACAAAGGATGG +
Preference number: 4 (lower is better)
Translates to: AAGSPGLWSAAAPSAACGDGLDW*FQDKGW
Trigger: CCATCCTTTGTCTTGGAACCACCAGTCTAGTCCGTC...TCCGCAAGCTGCAGAAGGAGCAGCAGCGCTCCAAAGACCTGGAGAGCCGGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CCA 90 bp TGGCCTTGGAGACAGCAGGGGACACTGAAGAGAGCAGGGGATCGGAGGCAGCCCTTAAACCCCCAGGGCTaGGACCTCCATTACTTGACT +
Preference number: 4 (lower is better)
Translates to: WPWRQQGTLKRAGDRRQPLNPQG*DLHYLT
Trigger: AGTCAAGTAATGGAGGTCCCAGCCCTGGGGGTTTAA...GGGCTGCCTCCGATCCCCTGCTCTCTTCAGTGTCCCCTGCTGTCTCCAAGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CCA 90 bp TTCCAGCGCATCTCCGGGTCACTGGACTTAGGGATGAGAGTGCCCAGTTCCTTGCCTATAGGGAAGGGGTaGGGCCTGGCTCCTCCATTC +
Preference number: 4 (lower is better)
Translates to: FQRISGSLDLGMRVPSSLPIGKG*GLAPPF
Trigger: GAATGGAGGAGCCAGGCCCCACCCCTTCCCTATAGG...CAAGGAACTGGGCACTCTCATCCCTAAGTCCAGTGACCCGGAGATGCGCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CCA 90 bp TGGGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCAGGGTTCATACCCTCCATGGGGCCTaGCCCCAGCAATCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: WVSSSLLFLAWAEQGRVHTLHGA*PQQSKA
Trigger: AGCTTTGGATTGCTGGGGCCAGGCCCCATGGAGGGT...ATGAACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp CTTCTGTGCCAGGACGGACTAGACTGGTGGTTCCAAGACAAAGGATGGAGCAACCTCCTCCTCCTTGCCTaGTTACAGGGGTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LLCQDGLDWWFQDKGWSNLLLLA*LQGWGL
Trigger: CAGGCCCCACCCCTGTAATCAGGCAAGGAGGAGGAG...GTTGCTCCATCCTTTGTCTTGGAACCACCAGTCTAGTCCGTCCTGGCACAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp TGGGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCAGGGTTCATACAAGGGTGGGGCTGTaGTCTCCACAAGCACTAGCG +
Preference number: 4 (lower is better)
Translates to: WVSSSLLFLAWAEQGRVHTRVGL*SPQALA
Trigger: CGCTAGTGCTTGTGGAGATCACAGCCCCACCCTTGT...ATGAACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp CTCCCTTTCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACCTGGTTCTGGTAACCTaGACTCAGTCCCCCACTAAT +
Preference number: 4 (lower is better)
Translates to: LPFPGDLARTVPRGQGRDLVLVT*TQSPTN
Trigger: ATTAGTGGGGGACTGAGTTCAGGTTACCAGAACCAG...GTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGAAAGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp CCTCCTAGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCGGTCCTGGAGCCCCCTaGAGAAGACGATGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: PPRLGQVGPRLRQGSLSTGPGAP*RRRCRE
Trigger: CTCTCTGCATCGTCTTCTGCAGGGGGCTCCAGGACC...GGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCTAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315869.8
CDS-3UTR GCA 90 bp TCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACCTCATCCCTTCAAAAGGGCCTTTaGCTCGGTCTCAGAGATCTC +
Preference number: 4 (lower is better)
Translates to: SQETWLGQSLGDRVETSSLQKGL*LGLRDL
Trigger: GAGATCTCTGAGACCGAGGCAAAGGCCCTTTTGAAG...GGATGAGGTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp TCCCCTTCCCCAAGAGCAAGGTTGGCTCAGAGCCCTCCTAGGTTAGGTCAGGTTTCTTTGGAGCGCTGCTaGTCCTTCTGCAGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: SPSPRARLAQSPPRLGQVSLERC*SFCSLR
Trigger: CCGCAAGCTGCAGAAGGAGCAGCAGCGCTCCAAAGA...AACCTGACCTAACCTAGGAGGGCTCTGAGCCAACCTTGCTCTTGGGGAAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp TGGGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCAGGGTTCATCTGACTCCTCCTCCTTaGCTGATTACAGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: WVSSSLLFLAWAEQGRVHLTPPP*LITGVG
Trigger: CCCCACCCCTGTAATCAGGCAAGGAGGAGGAGTCAG...ATGAACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp TCCCCTTCCCCAAGAGCAAGGTTGGCTCAGAGCCCTCCTAGGTTAGGTCAGGTTTACGCCATCCCGAGCTaGTTCGGCCGCATGAGACAT +
Preference number: 4 (lower is better)
Translates to: SPSPRARLAQSPPRLGQVYAIPS*FGRMRH
Trigger: ATGTCTCATGCGGCCGAACCAGCTCGGGATGGCGTA...AACCTGACCTAACCTAGGAGGGCTCTGAGCCAACCTTGCTCTTGGGGAAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp TCCCCTTCCCCAAGAGCAAGGTTGGCTCAGAGCCCTCCTAGGTTAGGTCAGGTTAAGAAGATGACGACATaGCAGGGGTCCTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SPSPRARLAQSPPRLGQVKKMTT*QGSWSP
Trigger: GGGGCTCCAGGACCCCTGCCATGTCGTCATCTTCTT...AACCTGACCTAACCTAGGAGGGCTCTGAGCCAACCTTGCTCTTGGGGAAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp AGTATACCCTCCATGGGGCCTGGCCCCAGCAATCCAAAGCTGACAACCTTGGGTCAGGTGGTAGCGCGTTaGGTTCTCCAGATGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SIPSMGPGPSNPKLTTLGQVVAR*VLQMGL
Trigger: CAGACCCATCTGGAGAACCCAACGCGCTACCACCTG...ACCCAAGGTTGTCAGCTTTGGATTGCTGGGGCCAGGCCCCATGGAGGGTATACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp AGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCACTCCTACACAGGCAGCGTGCTaGGGAGCTGCAGTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: RLGQVGPRLRQGSLSTTPTQAAC*GAAVLW
Trigger: CCACAGGACTGCAGCTCCCCAGCACGCTGCCTGTGT...AGGAGTGGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp GAAATACCTGCACTGGGCGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTGCTGACAGTGATGGCTaGTGTGGCCACGCCTTGACT +
Preference number: 4 (lower is better)
Translates to: EIPALGGSFGEGAGPHLTADSDG*CGHALT
Trigger: AGTCAAGGCGTGGCCACACCAGCCATCACTGTCAGC...AGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCGCCCAGTGCAGGTATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp TGCTTAGATGGGATGTTGCTGAGGGACAAGGGTGGGGCTGTGATCTCCACAAGCGAACGTTGCTGCGCCTaGCCTGCCCTCCTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: CLDGMLLRDKGGAVISTSERCCA*PALLLN
Trigger: ATTGAGGAGGAGGGCAGGCCAGGCGCAGCAACGTTC...GCTTGTGGAGATCACAGCCCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp CCTCCTAGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCGAACGTTGCTGCGCCTaGCCTGCCCTCCTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: PPRLGQVGPRLRQGSLSTERCCA*PALLLN
Trigger: ATTGAGGAGGAGGGCAGGCCAGGCGCAGCAACGTTC...GGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCTAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp TGCTTAGATGGGATGTTGCTGAGGGACAAGGGTGGGGCTGTGATCTCCACAAGCCCCCCAGGTGGTCGCTaGGAAAGTGCAGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: CLDGMLLRDKGGAVISTSPPGGR*ESAGPE
Trigger: TTCTGGACCTGCACTTTCCCAGCGACCACCTGGGGG...GCTTGTGGAGATCACAGCCCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp AGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGGGGGCAGGGCAGTCTCATaGGAGGGTGGGGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: RGYNMLLQPSSKLLPCWGGRAVS*EGGGKG
Trigger: GCCTTTTCCCCCACCCTCCCATGAGACTGCCCTGCC...CCCCCAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 25 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp TGGGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCAGGGTTCATGCTGAGGGACAAGGGTaGGGCTGTGATCTCCACAAG +
Preference number: 4 (lower is better)
Translates to: WVSSSLLFLAWAEQGRVHAEGQG*GCDLHK
Trigger: CTTGTGGAGATCACAGCCCCACCCTTGTCCCTCAGC...ATGAACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp TGGGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCAGGGTTCATCCCCAAGAGCAAGGTTaGCTCAGAGCCCTCCTAGGT +
Preference number: 4 (lower is better)
Translates to: WVSSSLLFLAWAEQGRVHPQEQG*LRALLG
Trigger: ACCTAGGAGGGCTCTGAGCCAACCTTGCTCTTGGGG...ATGAACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp TCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACCTCATCCCTCCAAATGAAGAACTaGGTGGGGAACAGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SQETWLGQSLGDRVETSSLQMKN*VGNRGW
Trigger: CCAACCTCTGTTCCCCACCCAGTTCTTCATTTGGAG...GGATGAGGTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp CCTCCTAGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCACCCTCCATGGGGCCTaGCCCCAGCAATCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: PPRLGQVGPRLRQGSLSTTLHGA*PQQSKA
Trigger: AGCTTTGGATTGCTGGGGCCAGGCCCCATGGAGGGT...GGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCTAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp GCCCAAGGGTGGGGGCCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGTGCTCCAGGGATCGCTaGCGGCTCTCCAGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: AQGWGPLTPDIGLENSSMCSRDR*RLSRSL
Trigger: CAAAGACCTGGAGAGCCGGCAGCGATCCCTGGAGCA...CATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGGCCCCCACCCTTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp AGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCACTCCTTGCTCCAGGGATCGCTaGCGGCTCTCCAGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: RLGQVGPRLRQGSLSTTPCSRDR*RLSRSL
Trigger: CAAAGACCTGGAGAGCCGGCAGCGATCCCTGGAGCA...AGGAGTGGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp GGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCAGGGTTCATGGTCCTCAATGTCCAGCTaGTCTGGCTTGAGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GLILTSVPCLGRAGQGSWSSMSS*SGLRLS
Trigger: TGACAGCCTCAAGCCAGAGCAGCTGGACATTGAGGA...CCATGAACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp CTTCTGTGCCAGGACGGACTAGACTGGTGGTTCCAAGACAAAGGATGGAGCAACTTGCTGCGCCTGGCCTaGCCTCCTCCTCAATGTCCA +
Preference number: 4 (lower is better)
Translates to: LLCQDGLDWWFQDKGWSNLLRLA*PPPQCP
Trigger: TGGACATTGAGGAGGAGGGCAGGCCAGGCGCAGCAA...GTTGCTCCATCCTTTGTCTTGGAACCACCAGTCTAGTCCGTCCTGGCACAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp GCCCAAGGGTGGGGGCCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGTACATGGAACGTTGCTaGGCCTGGCCTGCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: AQGWGPLTPDIGLENSSMYMERC*AWPALL
Trigger: GAGGAGGGCAGGCCAGGCGCAGCAACGTTCCATGTA...CATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGGCCCCCACCCTTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp AGTATACCCTCCATGGGGCCTGGCCCCAGCAATCCAAAGCTGACAACCTTGGGTTTCCTTTGGGGAAGGTaGAGGGCCTCATCTGACTCC +
Preference number: 4 (lower is better)
Translates to: SIPSMGPGPSNPKLTTLGFLWGR*RASSDS
Trigger: GGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAA...ACCCAAGGTTGTCAGCTTTGGATTGCTGGGGCCAGGCCCCATGGAGGGTATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp TTCCAGCGCATCTCCGGGTCACTGGACTTAGGGATGAGAGTGCCCAGTTCCTTGTTCCTTTGGGGAAGGTaGAGGGCCTCATCTGACTCC +
Preference number: 4 (lower is better)
Translates to: FQRISGSLDLGMRVPSSLFLWGR*RASSDS
Trigger: GGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAA...CAAGGAACTGGGCACTCTCATCCCTAAGTCCAGTGACCCGGAGATGCGCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR GCA 90 bp GGACTCTGCCCAAGGGTGGGGGCCTCTCACTCCAGATATAGGTCTGGAAAATTCCCTCCTCCAAGCTTCTaGCTTGCTGGGGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: GLCPRVGASHSRYRSGKFPPPSF*LAGGRL
Trigger: AAGCCTTCCCCCAGCAAGGCAGAAGCTTGGAGGAGG...GAATTTTCCAGACCTATATCTGGAGTGAGAGGCCCCCACCCTTGGGCAGAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp GGACTCTGCCCAAGGGTGGGGGCCTCTCACTCCAGATATAGGTCTGGAAAATTCGCTGACAGTGATGGCTaGTGTGGCCACGCCTTGACT +
Preference number: 4 (lower is better)
Translates to: GLCPRVGASHSRYRSGKFADSDG*CGHALT
Trigger: AGTCAAGGCGTGGCCACACCAGCCATCACTGTCAGC...GAATTTTCCAGACCTATATCTGGAGTGAGAGGCCCCCACCCTTGGGCAGAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp GGACTCTGCCCAAGGGTGGGGGCCTCTCACTCCAGATATAGGTCTGGAAAATTCGTTGGGCAGCTCAGCTaGGCAGGAGTTGCTGACAGT +
Preference number: 4 (lower is better)
Translates to: GLCPRVGASHSRYRSGKFVGQLS*AGVADS
Trigger: ACTGTCAGCAACTCCTGCCCAGCTGAGCTGCCCAAC...GAATTTTCCAGACCTATATCTGGAGTGAGAGGCCCCCACCCTTGGGCAGAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp GGACTCTGCCCAAGGGTGGGGGCCTCTCACTCCAGATATAGGTCTGGAAAATTCCTTCTGTTCCTTGCCTaGGCAGAGCAGGGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: GLCPRVGASHSRYRSGKFLLFLA*AEQGRV
Trigger: AACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAG...GAATTTTCCAGACCTATATCTGGAGTGAGAGGCCCCCACCCTTGGGCAGAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR CAA 72 bp CAGAGCTTAAACCCCCAGGGCTGGGACCTCCATTACTaGACTCCTCTTCTGTGCCAGGACGGACTAGACTGG +
Preference number: 4 (lower is better)
Translates to: QSLNPQGWDLHY*TPLLCQDGLDW
Trigger: CCAGTCTAGTCCGTCCTGGCACAGAAGAGGAGTCAAGTAATGGAGGTCCCAGCCCTGGGGGTTTAAGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp CTTCTGTGCCAGGACGGACTAGACTGGTGGTTCCAAGACAAAGGATGGAGCAACCCAGCCTTCTCCTTCTaGAATACCTGCACTGGGCGG +
Preference number: 4 (lower is better)
Translates to: LLCQDGLDWWFQDKGWSNPAFSF*NTCTGR
Trigger: CCGCCCAGTGCAGGTATTTCAGAAGGAGAAGGCTGG...GTTGCTCCATCCTTTGTCTTGGAACCACCAGTCTAGTCCGTCCTGGCACAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp GTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGGGAAGGCGCCCGCATTAGCTGCTaGCGCAGCAAGACCCTCGAT +
Preference number: 4 (lower is better)
Translates to: VQYAFTTLLQASALLGEGARISC*RSKTLD
Trigger: ATCGAGGGTCTTGCTGCGGCAGCAGCTAATGCGGGC...GCCTTCCCCCAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp AATGAGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGCAGGAGAGGCAGGTaGAGGACTGGGGAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: NEGVQYAFTTLLQASALLGRRGR*RTGEGS
Trigger: GCTCCCTTCCCCAGTCCTGCACCTGCCTCTCCTGCC...CAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp AGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCACTCCTTCTTTGGAGCGCTGCTaGTCCTTCTGCAGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: RLGQVGPRLRQGSLSTTPSLERC*SFCSLR
Trigger: CCGCAAGCTGCAGAAGGAGCAGCAGCGCTCCAAAGA...AGGAGTGGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp CCTCCTAGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCTGGTCGCTGGGAAAGTaGAGGTCCAGAAGGGCATCT +
Preference number: 4 (lower is better)
Translates to: PPRLGQVGPRLRQGSLSTWSLGK*RSRRAS
Trigger: AGATGCCCTTCTGGACCTGCACTTTCCCAGCGACCA...GGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCTAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp CTCGGTCTCAGAGATCTCCCGTTTGATGTTGGGCAGCTCAGCTGGGCAGGAGTTTTGACTCCTCTTCTGTaGCAGGACGGACTAGACTGG +
Preference number: 4 (lower is better)
Translates to: LGLRDLPFDVGQLSWAGVLTPLL*QDGLDW
Trigger: CCAGTCTAGTCCGTCCTGGCACAGAAGAGGAGTCAA...AACTCCTGCCCAGCTGAGCTGCCCAACATCAAACGGGAGATCTCTGAGACCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CCA 90 bp ACAAGCACTAGCGGTGGCCTGGTCCTACTGATTCTTTCACACCTGAAATACCTGCCTGGGAAGCCAGCTTaGGCCCGAGTGTGGTGGACA +
Preference number: 4 (lower is better)
Translates to: TSTSGGLVLLILSHLKYLPGKPA*ARVWWT
Trigger: TGTCCACCACACTCGGGCCCAAGCTGGCTTCCCAGG...CAGGTATTTCAGGTGTGAAAGAATCAGTAGGACCAGGCCACCGCTAGTGCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp AGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGGGGGCAGGCCATGGATCTaGGCCTGCAGTTCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: RGYNMLLQPSSKLLPCWGGRPWI*ACSSSS
Trigger: GGAACTAGAACTGCAGGCCCAGATCCATGGCCTGCC...CCCCCAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp AGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGGGCTTTCCCAGGAGACCTaGCTAGGACAGTCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: RGYNMLLQPSSKLLPCWGLSQET*LGQSLG
Trigger: CCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGAAAG...CCCCCAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp CGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCTCCTTGCCTGATCTCCAAATGAAGAACTaGGTGGGGAACAGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: RFLWGRCRASSDSSSLPDLQMKN*VGNRGW
Trigger: CCAACCTCTGTTCCCCACCCAGTTCTTCATTTGGAG...ATCAGGCAAGGAGGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp GTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGGGAAGGCACAAGGGTGGGGCTGTaGTCTCCACAAGCACTAGCG +
Preference number: 4 (lower is better)
Translates to: VQYAFTTLLQASALLGEGTRVGL*SPQALA
Trigger: CGCTAGTGCTTGTGGAGATCACAGCCCCACCCTTGT...GCCTTCCCCCAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp AGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCACTCCTTCCAAGCTTCTGCCTTaGTGGGGGAAGGCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: RLGQVGPRLRQGSLSTTPSKLLP*WGKASS
Trigger: ACTGGAAGCCTTCCCCCAGCAAGGCAGAAGCTTGGA...AGGAGTGGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp AATGAGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGACGGCTCAATGTGTaGCCCCCAGCAGAGACGCCA +
Preference number: 4 (lower is better)
Translates to: NEGVQYAFTTLLQASALLGRLNV*PPAETP
Trigger: TGGCGTCTCTGCTGGGGGCCACACATTGAGCCGTCC...CAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp AATGAGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGCACCTGAGCAGGGGGTaGACGGCTCAATGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: NEGVQYAFTTLLQASALLHLSRG*TAQCVA
Trigger: GGCCACACATTGAGCCGTCCACCCCCTGCTCAGGTG...CAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp GCCCAAGGGTGGGGGCCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGTGGGCCCGAGTGTGGTaGACAGGTACTGTTTCACCT +
Preference number: 4 (lower is better)
Translates to: AQGWGPLTPDIGLENSSMWARVW*TGTVSP
Trigger: AGGTGAAACAGTACCTGTCCACCACACTCGGGCCCA...CATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGGCCCCCACCCTTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp CGGACTAGACTGGTGGTTCCAAGACAAAGGATGGAGCAACATCCTGACATCTCCGGCTCTCCAGGTCTTTaGAGCGCTGCTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RTRLVVPRQRMEQHPDISGSPGL*SAAAPS
Trigger: AGAAGGAGCAGCAGCGCTCCAAAGACCTGGAGAGCC...GGAGATGTCAGGATGTTGCTCCATCCTTTGTCTTGGAACCACCAGTCTAGTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp ACAAGCACTAGCGGTGGCCTGGTCCTACTGATTCTTTCACACCTGAAATACCTGCCCCCAGGTGGTCGCTaGGAAAGTGCAGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: TSTSGGLVLLILSHLKYLPPGGR*ESAGPE
Trigger: TTCTGGACCTGCACTTTCCCAGCGACCACCTGGGGG...CAGGTATTTCAGGTGTGAAAGAATCAGTAGGACCAGGCCACCGCTAGTGCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp GCCCAAGGGTGGGGGCCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGTCTCCTTCCCTCACCTaGGCAAGGATGAGTCCCACA +
Preference number: 4 (lower is better)
Translates to: AQGWGPLTPDIGLENSSMSPSLT*ARMSPT
Trigger: TGTGGGACTCATCCTTGCCCAGGTGAGGGAAGGAGA...CATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGGCCCCCACCCTTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp CAGAGCCCTCCTAGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTACAGGACGGACTAGACTaGTGGTTCCAAGACAAAGGA +
Preference number: 4 (lower is better)
Translates to: QSPPRLGQVGPRLRQGSLQDGLD*WFQDKG
Trigger: TCCTTTGTCTTGGAACCACCAGTCTAGTCCGTCCTG...TAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCTAGGAGGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp GAGCTTAAGTACCACTCCTCCCTGCAGTGTGGAATGCTTAGATGGGATGTTGCTCCCAGGGGAAGGGGCTaGGTCTCATCCTCACTTCTG +
Preference number: 4 (lower is better)
Translates to: ELKYHSSLQCGMLRWDVAPRGRG*VSSSLL
Trigger: CAGAAGTGAGGATGAGACCCAGCCCCTTCCCCTGGG...AGCAACATCCCATCTAAGCATTCCACACTGCAGGGAGGAGTGGTACTTAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp TCCTGTGGTGCCTCCGGGCAGATAGCTGAGCATTTCATCATTGTAACTGGACTCCCCCAAGAGCAAGGTTaGCTCAGAGCCCTCCTAGGT +
Preference number: 4 (lower is better)
Translates to: SCGASGQIAEHFIIVTGLPQEQG*LRALLG
Trigger: ACCTAGGAGGGCTCTGAGCCAACCTTGCTCTTGGGG...GAGTCCAGTTACAATGATGAAATGCTCAGCTATCTGCCCGGAGGCACCACAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CCA 90 bp AGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCACTCCTGTGGGGAACAGAGGTTaGGGTGGCCTAGATTCTCAG +
Preference number: 4 (lower is better)
Translates to: RLGQVGPRLRQGSLSTTPVGNRG*GGLDSQ
Trigger: CTGAGAATCTAGGCCACCCCAACCTCTGTTCCCCAC...AGGAGTGGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp TACCACTCCTCCCTGCAGTGTGGAATGCTTAGATGGGATGTTGCTGAGGGACAATCAGTATACCCTCCATaGGGCCTGGCCCCAGCAATC +
Preference number: 4 (lower is better)
Translates to: YHSSLQCGMLRWDVAEGQSVYPP*GLAPAI
Trigger: GATTGCTGGGGCCAGGCCCCATGGAGGGTATACTGA...TTGTCCCTCAGCAACATCCCATCTAAGCATTCCACACTGCAGGGAGGAGTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
3UTR CAA 72 bp GGGTCACTGGACTTAGGGATGAGAGTGCCCAGTTCCTaGATCCTGTCGTTAATGTTGAATCGCCTGCGACGC +
Preference number: 4 (lower is better)
Translates to: GSLDLGMRVPSS*ILSLMLNRLRR
Trigger: GCGTCGCAGGCGATTCAACATTAACGACAGGATCAAGGAACTGGGCACTCTCATCCCTAAGTCCAGTGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR TCA 90 bp TGCTTAGATGGGATGTTGCTGAGGGACAAGGGTGGGGCTGTGATCTCCACAAGCGTAAGGGTTGGCTTTTaGGCTCGTAGAAGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: CLDGMLLRDKGGAVISTSVRVGF*ARRSCQ
Trigger: CTGACAGCTTCTACGAGCTCAAAAGCCAACCCTTAC...GCTTGTGGAGATCACAGCCCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp GTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGGGAAGGCCAGAGATCTCCCGTTTaGTGTTGGGCAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: VQYAFTTLLQASALLGEGQRSPV*CWAAQL
Trigger: CAGCTGAGCTGCCCAACATCAAACGGGAGATCTCTG...GCCTTCCCCCAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp TCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACCTCATCCTCTTGCCCTACATGTTaGAAAAGAATACTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: SQETWLGQSLGDRVETSSSCPTC*KRILRY
Trigger: GTACCTCAGTATTCTTTTTCAACATGTAGGGCAAGA...GGATGAGGTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp ACAAGCACTAGCGGTGGCCTGGTCCTACTGATTCTTTCACACCTGAAATACCTGCTGACTCCTCCTCCTTaGCTGATTACAGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TSTSGGLVLLILSHLKYLLTPPP*LITGVG
Trigger: CCCCACCCCTGTAATCAGGCAAGGAGGAGGAGTCAG...CAGGTATTTCAGGTGTGAAAGAATCAGTAGGACCAGGCCACCGCTAGTGCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp AATGAGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGTGGAGTGGGAGGTACTaGCAGGCCATGGATCTGGGC +
Preference number: 4 (lower is better)
Translates to: NEGVQYAFTTLLQASALLWSGRY*QAMDLG
Trigger: GCCCAGATCCATGGCCTGCCAGTACCTCCCACTCCA...CAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp ACAAGCACTAGCGGTGGCCTGGTCCTACTGATTCTTTCACACCTGAAATACCTGAAAGCAGCCCTGGAGTaGGAGGTACTGGCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: TSTSGGLVLLILSHLKYLKAALE*EVLAGH
Trigger: ATGGCCTGCCAGTACCTCCCACTCCAGGGCTGCTTT...CAGGTATTTCAGGTGTGAAAGAATCAGTAGGACCAGGCCACCGCTAGTGCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp ACAAGCACTAGCGGTGGCCTGGTCCTACTGATTCTTTCACACCTGAAATACCTGCAAGGAAAGCAGCCCTaGAGTGGGAGGTACTGGCAG +
Preference number: 4 (lower is better)
Translates to: TSTSGGLVLLILSHLKYLQGKQP*SGRYWQ
Trigger: CTGCCAGTACCTCCCACTCCAGGGCTGCTTTCCTTG...CAGGTATTTCAGGTGTGAAAGAATCAGTAGGACCAGGCCACCGCTAGTGCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp TTGTCTTTCTTCTGCCGTTCCTTCAAAAGGGCCTTTGCCTCGGTCTCAGAGATCGCTGAGGGACAAGGGTaGGGCTGTGATCTCCACAAG +
Preference number: 4 (lower is better)
Translates to: LSFFCRSFKRAFASVSEIAEGQG*GCDLHK
Trigger: CTTGTGGAGATCACAGCCCCACCCTTGTCCCTCAGC...GATCTCTGAGACCGAGGCAAAGGCCCTTTTGAAGGAACGGCAGAAGAAAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CCA 90 bp CTCCTCAATGTCCAGCTGCTCTGGCTTGAGGCTGTCAGAAGCCGAAGTCGTGGCTGTGGAATGCTTAGATaGGATGTTGCTGAGGGACAA +
Preference number: 4 (lower is better)
Translates to: LLNVQLLWLEAVRSRSRGCGMLR*DVAEGQ
Trigger: TTGTCCCTCAGCAACATCCCATCTAAGCATTCCACA...GCCACGACTTCGGCTTCTGACAGCCTCAAGCCAGAGCAGCTGGACATTGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR TCA 90 bp ACAAGCACTAGCGGTGGCCTGGTCCTACTGATTCTTTCACACCTGAAATACCTGGGTGTGGCCACGCCTTaGCTACTGTACACATCAAGC +
Preference number: 4 (lower is better)
Translates to: TSTSGGLVLLILSHLKYLGVATP*LLYTSS
Trigger: GCTTGATGTGTACAGTAGTCAAGGCGTGGCCACACC...CAGGTATTTCAGGTGTGAAAGAATCAGTAGGACCAGGCCACCGCTAGTGCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp AGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGGGCTGGTTCTGGTAACCTaGACTCAGTCCCCCACTAAT +
Preference number: 4 (lower is better)
Translates to: RGYNMLLQPSSKLLPCWGLVLVT*TQSPTN
Trigger: ATTAGTGGGGGACTGAGTTCAGGTTACCAGAACCAG...CCCCCAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp GGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCAGGGTTCATGGAACTCTGAAATGGGGTaGTTCCTCCAAATGAAGAAC +
Preference number: 4 (lower is better)
Translates to: GLILTSVPCLGRAGQGSWNSEMG*FLQMKN
Trigger: GTTCTTCATTTGGAGGAATCACCCCATTTCAGAGTT...CCATGAACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp CGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCTCCTTGCCTGATAACTCTGAAATGGGGTaGTTCCTCCAAATGAAGAAC +
Preference number: 4 (lower is better)
Translates to: RFLWGRCRASSDSSSLPDNSEMG*FLQMKN
Trigger: GTTCTTCATTTGGAGGAATCACCCCATTTCAGAGTT...ATCAGGCAAGGAGGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp TACCACTCCTCCCTGCAGTGTGGAATGCTTAGATGGGATGTTGCTGAGGGACAATCCTCAATGTCCAGCTaGTCTGGCTTGAGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: YHSSLQCGMLRWDVAEGQSSMSS*SGLRLS
Trigger: TGACAGCCTCAAGCCAGAGCAGCTGGACATTGAGGA...TTGTCCCTCAGCAACATCCCATCTAAGCATTCCACACTGCAGGGAGGAGTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp CGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCTCCTTGCCTGATTTCCAAGACAAAGGATaGAGCAACATCCTGACATCT +
Preference number: 4 (lower is better)
Translates to: RFLWGRCRASSDSSSLPDFQDKG*SNILTS
Trigger: AGATGTCAGGATGTTGCTCCATCCTTTGTCTTGGAA...ATCAGGCAAGGAGGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp AGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGGGCAGGACGGACTAGACTaGTGGTTCCAAGACAAAGGA +
Preference number: 4 (lower is better)
Translates to: RGYNMLLQPSSKLLPCWGQDGLD*WFQDKG
Trigger: TCCTTTGTCTTGGAACCACCAGTCTAGTCCGTCCTG...CCCCCAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp AATGAGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGCTTCTGTTCCTTGCCTaGGCAGAGCAGGGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: NEGVQYAFTTLLQASALLLLFLA*AEQGRV
Trigger: AACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAG...CAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp GGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCAGGGTTCATGGTCTTGCCCTACATGTTaGAAAAGAATACTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: GLILTSVPCLGRAGQGSWSCPTC*KRILRY
Trigger: GTACCTCAGTATTCTTTTTCAACATGTAGGGCAAGA...CCATGAACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp AATGAGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGTGGCTGGTGTGGCCTaGAGTGATATTGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: NEGVQYAFTTLLQASALLVAGVA*SDIGRL
Trigger: AAGCCTCCCAATATCACTGCAGGCCACACCAGCCAC...CAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315869.8
CDS-3UTR GCA 90 bp AATGAGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGCCCTGCAGAAGACGATaGAGAGAGTGTAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: NEGVQYAFTTLLQASALLPCRRR*RECSWG
Trigger: ACCCCAGCTACACTCTCTGCATCGTCTTCTGCAGGG...CAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315869.8
CDS-3UTR GCA 90 bp TCCTGTGGTGCCTCCGGGCAGATAGCTGAGCATTTCATCATTGTAACTGGACTCCTTCAAAAGGGCCTTTaGCTCGGTCTCAGAGATCTC +
Preference number: 4 (lower is better)
Translates to: SCGASGQIAEHFIIVTGLLQKGL*LGLRDL
Trigger: GAGATCTCTGAGACCGAGGCAAAGGCCCTTTTGAAG...GAGTCCAGTTACAATGATGAAATGCTCAGCTATCTGCCCGGAGGCACCACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR GCA 90 bp GTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGGGAAGGCATCACCTTCCCAAACTaGCCCTCAAGGAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: VQYAFTTLLQASALLGEGITFPN*PSRKKA
Trigger: TGCCTTCTTCCTTGAGGGGCAGTTTGGGAAGGTGAT...GCCTTCCCCCAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp AATGAGGGGGTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGTTGGGTTCTCCAGATaGGTCTGCACCTTGAGCACC +
Preference number: 4 (lower is better)
Translates to: NEGVQYAFTTLLQASALLVGFSR*VCTLST
Trigger: GGTGCTCAAGGTGCAGACCCATCTGGAGAACCCAAC...CAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTACCCCCTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp GTACAATATGCTTTTACAACCCTCCTCCAAGCTTCTGCCTTGCTGGGGGAAGGCGACGGACTAGACTGGTaGTTCCAAGACAAAGGATGG +
Preference number: 4 (lower is better)
Translates to: VQYAFTTLLQASALLGEGDGLDW*FQDKGW
Trigger: CCATCCTTTGTCTTGGAACCACCAGTCTAGTCCGTC...GCCTTCCCCCAGCAAGGCAGAAGCTTGGAGGAGGGTTGTAAAAGCATATTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp TACCACTCCTCCCTGCAGTGTGGAATGCTTAGATGGGATGTTGCTGAGGGACAATTAAACCCCCAGGGCTaGGACCTCCATTACTTGACT +
Preference number: 4 (lower is better)
Translates to: YHSSLQCGMLRWDVAEGQLNPQG*DLHYLT
Trigger: AGTCAAGTAATGGAGGTCCCAGCCCTGGGGGTTTAA...TTGTCCCTCAGCAACATCCCATCTAAGCATTCCACACTGCAGGGAGGAGTGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp TACCACTCCTCCCTGCAGTGTGGAATGCTTAGATGGGATGTTGCTGAGGGACAACTCCGGGCAGATAGCTaGGCATTTCATCATTGTAAC +
Preference number: 4 (lower is better)
Translates to: YHSSLQCGMLRWDVAEGQLRADS*AFHHCN
Trigger: GTTACAATGATGAAATGCTCAGCTATCTGCCCGGAG...TTGTCCCTCAGCAACATCCCATCTAAGCATTCCACACTGCAGGGAGGAGTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp CCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGAAATTTCATAATCTGCGCCTCTCCTGCTCCTaGGCCTGGGCCCGCATTAGC +
Preference number: 4 (lower is better)
Translates to: PLTPDIGLENSSMKFHNLRLSCS*AWARIS
Trigger: GCTAATGCGGGCCCAGGCGCAGGAGCAGGAGAGGCG...CAGATTATGAAATTTCATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp GAGCATTTCATCATTGTAACTGGACTCCAGGCTGATGATCTCATCAATGACATCAAGAAGGCAGGACTCTaGCCAAGGGTGGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: EHFIIVTGLQADDLINDIKKAGL*PRVGAS
Trigger: AGAGGCCCCCACCCTTGGGCAGAGTCCTGCCTTCTT...GATGTCATTGATGAGATCATCAGCCTGGAGTCCAGTTACAATGATGAAATGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CCA 90 bp AGGTTAGGTCAGGTTGGTCCCAGGTTAAGGCAGGGGAGCTTAAGTACCACTCCTTGTGGAATGCTTAGATaGGATGTTGCTGAGGGACAA +
Preference number: 4 (lower is better)
Translates to: RLGQVGPRLRQGSLSTTPCGMLR*DVAEGQ
Trigger: TTGTCCCTCAGCAACATCCCATCTAAGCATTCCACA...AGGAGTGGTACTTAAGCTCCCCTGCCTTAACCTGGGACCAACCTGACCTAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp ACAAGCACTAGCGGTGGCCTGGTCCTACTGATTCTTTCACACCTGAAATACCTGGAACAGAGGTTGGGGTaGCCTAGATTCTCAGTATGC +
Preference number: 4 (lower is better)
Translates to: TSTSGGLVLLILSHLKYLEQRLG*PRFSVC
Trigger: GCATACTGAGAATCTAGGCCACCCCAACCTCTGTTC...CAGGTATTTCAGGTGTGAAAGAATCAGTAGGACCAGGCCACCGCTAGTGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp CCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGAAATTTCATAATCTGGGCAGGAGAGGCAGGTaGAGGACTGGGGAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PLTPDIGLENSSMKFHNLGRRGR*RTGEGS
Trigger: GCTCCCTTCCCCAGTCCTGCACCTGCCTCTCCTGCC...CAGATTATGAAATTTCATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp CCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGAAATTTCATAATCTGCCAGGGGGCAGGCCCTaGTCTCATGTCCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PLTPDIGLENSSMKFHNLPGGRP*SHVLLQ
Trigger: CTGGAGAAGGACATGAGATCAGGGCCTGCCCCCTGG...CAGATTATGAAATTTCATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp GAGCATTTCATCATTGTAACTGGACTCCAGGCTGATGATCTCATCAATGACATCTCCAAGCTTCTGCCTTaGTGGGGGAAGGCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: EHFIIVTGLQADDLINDISKLLP*WGKASS
Trigger: ACTGGAAGCCTTCCCCCAGCAAGGCAGAAGCTTGGA...GATGTCATTGATGAGATCATCAGCCTGGAGTCCAGTTACAATGATGAAATGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CCA 90 bp ATTGTAACTGGACTCCAGGCTGATGATCTCATCAATGACATCATCAATCTCCTTGTTGGGCAGCTCAGCTaGGCAGGAGTTGCTGACAGT +
Preference number: 4 (lower is better)
Translates to: IVTGLQADDLINDIINLLVGQLS*AGVADS
Trigger: ACTGTCAGCAACTCCTGCCCAGCTGAGCTGCCCAAC...AAGGAGATTGATGATGTCATTGATGAGATCATCAGCCTGGAGTCCAGTTACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CCA 90 bp TCCTGTGGTGCCTCCGGGCAGATAGCTGAGCATTTCATCATTGTAACTGGACTCTTCCAAGACAAAGGATaGAGCAACATCCTGACATCT +
Preference number: 4 (lower is better)
Translates to: SCGASGQIAEHFIIVTGLFQDKG*SNILTS
Trigger: AGATGTCAGGATGTTGCTCCATCCTTTGTCTTGGAA...GAGTCCAGTTACAATGATGAAATGCTCAGCTATCTGCCCGGAGGCACCACAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR TCA 90 bp CCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGAAATTTCATAATCTGCCAGCTGCTCTGGCTTaGGGCTGTCAGAAGCCGAAG +
Preference number: 4 (lower is better)
Translates to: PLTPDIGLENSSMKFHNLPAALA*GCQKPK
Trigger: CTTCGGCTTCTGACAGCCTCAAGCCAGAGCAGCTGG...CAGATTATGAAATTTCATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR GCA 90 bp CCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGAAATTTCATAATCTGTACATGGAACGTTGCTaGGCCTGGCCTGCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PLTPDIGLENSSMKFHNLYMERC*AWPALL
Trigger: GAGGAGGGCAGGCCAGGCGCAGCAACGTTCCATGTA...CAGATTATGAAATTTCATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp CCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGAAATTTCATAATCTGGGGCCTCATCCTGACTaGTCCTCCTTTCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PLTPDIGLENSSMKFHNLGPHPD*SSFPGW
Trigger: CCACCCAGGAAAGGAGGACCAGTCAGGATGAGGCCC...CAGATTATGAAATTTCATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp CCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGAAATTTCATAATCTGACTGGGCGGTTCCTTTaGGGAAGGTGCAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: PLTPDIGLENSSMKFHNLTGRFL*GRCRAS
Trigger: TGAGGCCCTGCACCTTCCCCAAAGGAACCGCCCAGT...CAGATTATGAAATTTCATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp CCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGAAATTTCATAATCTGCTGGGGTGGCTGGTGTaGCCTGCAGTGATATTGGGA +
Preference number: 4 (lower is better)
Translates to: PLTPDIGLENSSMKFHNLLGWLV*PAVILG
Trigger: TCCCAATATCACTGCAGGCCACACCAGCCACCCCAG...CAGATTATGAAATTTCATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315869.8
CDS-3UTR CCA 90 bp CCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGAAATTTCATAATCTGAAGAAGATGACGACATaGCAGGGGTCCTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: PLTPDIGLENSSMKFHNLKKMTT*QGSWSP
Trigger: GGGGCTCCAGGACCCCTGCCATGTCGTCATCTTCTT...CAGATTATGAAATTTCATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp CCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGAAATTTCATAATCTGCAGAAGCCGAAGTCGTaGCCAAGGAAAGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: PLTPDIGLENSSMKFHNLQKPKS*PRKAAL
Trigger: CAGGGCTGCTTTCCTTGGCCACGACTTCGGCTTCTG...CAGATTATGAAATTTCATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CCA 90 bp CCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGAAATTTCATAATCTGCTTTCCCAGGAGACCTaGCTAGGACAGTCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: PLTPDIGLENSSMKFHNLLSQET*LGQSLG
Trigger: CCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGAAAG...CAGATTATGAAATTTCATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR TCA 90 bp GAGCATTTCATCATTGTAACTGGACTCCAGGCTGATGATCTCATCAATGACATCCTCCGGGCAGATAGCTaGGCATTTCATCATTGTAAC +
Preference number: 4 (lower is better)
Translates to: EHFIIVTGLQADDLINDILRADS*AFHHCN
Trigger: GTTACAATGATGAAATGCTCAGCTATCTGCCCGGAG...GATGTCATTGATGAGATCATCAGCCTGGAGTCCAGTTACAATGATGAAATGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CCA 90 bp ATTGTAACTGGACTCCAGGCTGATGATCTCATCAATGACATCATCAATCTCCTTGAACAGAGGTTGGGGTaGCCTAGATTCTCAGTATGC +
Preference number: 4 (lower is better)
Translates to: IVTGLQADDLINDIINLLEQRLG*PRFSVC
Trigger: GCATACTGAGAATCTAGGCCACCCCAACCTCTGTTC...AAGGAGATTGATGATGTCATTGATGAGATCATCAGCCTGGAGTCCAGTTACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS TCA 90 bp CGCTGGCCTCTACGCCATCCCGAGCTGGTTCGGCCGCATGAGACATaGCGCCCGGCCCCGGGCGAGCCCTGCCAGGCCGGTCGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: RWPLRHPELVRPHET*RPAPGEPCQAGRAS
Trigger: CGAGGCCCGACCGGCCTGGCAGGGCTCGCCCGGGGCCGGGCGTCATGTCTCATGCGGCCGAACCAGCTCGGGATGGCGTAGAGGCCAGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS TCA 90 bp CCCTCCGCGCTGGCCTCTACGCCATCCCGAGCTGGTTCGGCCGCATaGGACATGACGCCCGGCCCCGGGCGAGCCCTGCCAGGCCGGTCG +
Preference number: 5 (lower is better)
Translates to: PSALASTPSRAGSAA*DMTPGPGRALPGRS
Trigger: CGACCGGCCTGGCAGGGCTCGCCCGGGGCCGGGCGTCATGTCTCATGCGGCCGAACCAGCTCGGGATGGCGTAGAGGCCAGCGCGGAGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS CCA 90 bp CACGGCTCGAGGGCCCTCCGCGCTGGCCTCTACGCCATCCCGAGCTaGTTCGGCCGCATGAGACATGACGCCCGGCCCCGGGCGAGCCCT +
Preference number: 5 (lower is better)
Translates to: HGSRALRAGLYAIPS*FGRMRHDARPRASP
Trigger: AGGGCTCGCCCGGGGCCGGGCGTCATGTCTCATGCGGCCGAACCAGCTCGGGATGGCGTAGAGGCCAGCGCGGAGGGCCCTCGAGCCGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp GGCAGGCAGTGGCTGGGCACTTGCGGGCCCCGGCGGTGGGGTGAGGGCCTGGGACCTCACTTCTGTTCCTaGCCTGGGCAGAGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: GRQWLGTCGPRRWGEGLGPHFCS*PGQSRA
Trigger: TGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGG...TCCCAGGCCCTCACCCCACCGCCGGGGCCCGCAAGTGCCCAGCCACTGCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS CCA 90 bp GCGGCGGCCTGTTCCCGACGCTCACGCCTCTCCTGCTCCTGCGCCTaGGCCCGCATTAGCTGCTGCCGCAGCAAGACCCTCGATGAAGAA +
Preference number: 5 (lower is better)
Translates to: AAACSRRSRLSCSCA*ARISCCRSKTLDEE
Trigger: TTCTTCATCGAGGGTCTTGCTGCGGCAGCAGCTAATGCGGGCCCAGGCGCAGGAGCAGGAGAGGCGTGAGCGTCGGGAACAGGCCGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315869.8
ENST00000487451.1
ENST00000493583.5
CDS GCA 90 bp CGCTCACGCCTCTCCTGCTCCTGCGCCTGGGCCCGCATTAGCTGCTaGCGCAGCAAGACCCTCGATGAAGAAGATGACGACATGGCAGGG +
Preference number: 5 (lower is better)
Translates to: RSRLSCSCAWARISC*RSKTLDEEDDDMAG
Trigger: CCCTGCCATGTCGTCATCTTCTTCATCGAGGGTCTTGCTGCGGCAGCAGCTAATGCGGGCCCAGGCGCAGGAGCAGGAGAGGCGTGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315869.8
ENST00000487451.1
ENST00000493583.5
CDS-3UTR CAA 90 bp ACCTGCACTGGGCGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCCCCCTACATGGAACGTaGCTGCGCCTGGCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: TCTGRFLWGRCRASSDSSPLHGT*LRLACP
Trigger: AGGGCAGGCCAGGCGCAGCAACGTTCCATGTAGGGG...GGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCGCCCAGTGCAGGT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp GTGAGGGCCTGGGAAGCCAGCTTGGGCCCGAGTGTGGTGGACAGGTACTGTTTCCCCCTACATGGAACGTaGCTGCGCCTGGCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: VRAWEASLGPSVVDRYCFPLHGT*LRLACP
Trigger: AGGGCAGGCCAGGCGCAGCAACGTTCCATGTAGGGG...GAAACAGTACCTGTCCACCACACTCGGGCCCAAGCTGGCTTCCCAGGCCCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CAA 90 bp TCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACCTCATCCCACTGGGCGGTTCCTTaGGGGAAGGTGCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: SQETWLGQSLGDRVETSSHWAVP*GKVQGL
Trigger: GAGGCCCTGCACCTTCCCCAAAGGAACCGCCCAGTG...GGATGAGGTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS GCA 90 bp CGACGCTCACGCCTCTCCTGCTCCTGCGCCTGGGCCCGCATTAGCTaGTGCCGCAGCAAGACCCTCGATGAAGAAGATGACGACATGGCA +
Preference number: 5 (lower is better)
Translates to: RRSRLSCSCAWARIS*CRSKTLDEEDDDMA
Trigger: TGCCATGTCGTCATCTTCTTCATCGAGGGTCTTGCTGCGGCAGCAGCTAATGCGGGCCCAGGCGCAGGAGCAGGAGAGGCGTGAGCGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315869.8
ENST00000487451.1
ENST00000493583.5
CDS-3UTR CAA 90 bp TGGGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCAGGGTTCATAGCGCCATGGGGCTGTaGGGCGCACTGCCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: WVSSSLLFLAWAEQGRVHSAMGL*GALPVG
Trigger: CCCCACAGGCAGTGCGCCCAACAGCCCCATGGCGCT...ATGAACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp GAAATACCTGCACTGGGCGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTGCCTGGGAAGCCAGCTaGGGCCCGAGTGTGGTGGAC +
Preference number: 5 (lower is better)
Translates to: EIPALGGSFGEGAGPHLTAWEAS*GPSVVD
Trigger: GTCCACCACACTCGGGCCCAAGCTGGCTTCCCAGGC...AGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCGCCCAGTGCAGGTATTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp CTCCCTTTCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACCCTCACTTCTGTTCCTaGCCTGGGCAGAGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: LPFPGDLARTVPRGQGRDPHFCS*PGQSRA
Trigger: TGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGG...GTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGAAAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp TCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACCTCATCCTGGCCTGCAGTGATATaGGGAGGCTTGAGCGAAGGG +
Preference number: 5 (lower is better)
Translates to: SQETWLGQSLGDRVETSSWPAVI*GGLSEG
Trigger: CCCTTCGCTCAAGCCTCCCAATATCACTGCAGGCCA...GGATGAGGTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315869.8
CDS-3UTR CAA 90 bp TGCTTAGATGGGATGTTGCTGAGGGACAAGGGTGGGGCTGTGATCTCCACAAGCGCCTGGGAAGCCAGCTaGGGCCCGAGTGTGGTGGAC +
Preference number: 5 (lower is better)
Translates to: CLDGMLLRDKGGAVISTSAWEAS*GPSVVD
Trigger: GTCCACCACACTCGGGCCCAAGCTGGCTTCCCAGGC...GCTTGTGGAGATCACAGCCCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp CTCCCTTTCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACTCAGCTGGGCAGGAGTaGCTGACAGTGATGGCTGGT +
Preference number: 5 (lower is better)
Translates to: LPFPGDLARTVPRGQGRDSAGQE*LTVMAG
Trigger: ACCAGCCATCACTGTCAGCAACTCCTGCCCAGCTGA...GTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGAAAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp ACCTGCACTGGGCGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCATCTCCCGTTTGATGTaGGGCAGCTCAGCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: TCTGRFLWGRCRASSDSSISRLM*GSSAGQ
Trigger: CTGCCCAGCTGAGCTGCCCAACATCAAACGGGAGAT...GGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCGCCCAGTGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp TCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACCTCATCCATCTCCCGTTTGATGTaGGGCAGCTCAGCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: SQETWLGQSLGDRVETSSISRLM*GSSAGQ
Trigger: CTGCCCAGCTGAGCTGCCCAACATCAAACGGGAGAT...GGATGAGGTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp AGTATACCCTCCATGGGGCCTGGCCCCAGCAATCCAAAGCTGACAACCTTGGGTCACTGGGCGGTTCCTTaGGGGAAGGTGCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: SIPSMGPGPSNPKLTTLGHWAVP*GKVQGL
Trigger: GAGGCCCTGCACCTTCCCCAAAGGAACCGCCCAGTG...ACCCAAGGTTGTCAGCTTTGGATTGCTGGGGCCAGGCCCCATGGAGGGTATACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS TCA 90 bp ATCTCCCTGTGGGGCCCAAGTGGGAGGCAAGCAGGAAATGCCACATaGGGAGTTTCTCAGGAGCTGAGGCGGGGATTGCACCAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: ISLWGPSGRQAGNAT*GVSQELRRGLHQVG
Trigger: TCCCACCTGGTGCAATCCCCGCCTCAGCTCCTGAGAAACTCCTCATGTGGCATTTCCTGCTTGCCTCCCACTTGGGCCCCACAGGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495940.2
CDS-3UTR CAA 90 bp GAAATACCTGCACTGGGCGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTAGATGGGTCTGCACCTaGAGCACCTCCCTGGGCACC +
Preference number: 5 (lower is better)
Translates to: EIPALGGSFGEGAGPHLTRWVCT*STSLGT
Trigger: GGTGCCCAGGGAGGTGCTCAAGGTGCAGACCCATCT...AGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCGCCCAGTGCAGGTATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp CGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCTCCTTGCCTGATGCAGGTGGTAGCGCGTaGGGTTCTCCAGATGGGTCT +
Preference number: 5 (lower is better)
Translates to: RFLWGRCRASSDSSSLPDAGGSA*GSPDGS
Trigger: AGACCCATCTGGAGAACCCAACGCGCTACCACCTGC...ATCAGGCAAGGAGGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp TGCGGTTGGCCTGCTCCAGGGATCGCTGCCGGCTCTCCAGGTCTTTGGAGCGCTATCCTGTCGTTAATGTaGAATCGCCTGCGACGCTCA +
Preference number: 5 (lower is better)
Translates to: CGWPAPGIAAGSPGLWSAILSLM*NRLRRS
Trigger: TGAGCGTCGCAGGCGATTCAACATTAACGACAGGAT...AGCGCTCCAAAGACCTGGAGAGCCGGCAGCGATCCCTGGAGCAGGCCAACCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS TCA 90 bp GTGGGAGGCAAGCAGGAAATGCCACATGAGGAGTTTCTCAGGAGCTaGGGCGGGGATTGCACCAGGTGGGAGCCTCCCACCACATGCTTA +
Preference number: 5 (lower is better)
Translates to: VGGKQEMPHEEFLRS*GGDCTRWEPPTTCL
Trigger: TAAGCATGTGGTGGGAGGCTCCCACCTGGTGCAATCCCCGCCTCAGCTCCTGAGAAACTCCTCATGTGGCATTTCCTGCTTGCCTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495940.2
CDS CCA 90 bp TTAGCTGCTGCCGCAGCAAGACCCTCGATGAAGAAGATGACGACATaGCAGGGGTCCTGGAGCCCCCTGCAGAAGACGATGCAGAGAGTG +
Preference number: 5 (lower is better)
Translates to: LAAAAARPSMKKMTT*QGSWSPLQKTMQRV
Trigger: CACTCTCTGCATCGTCTTCTGCAGGGGGCTCCAGGACCCCTGCCATGTCGTCATCTTCTTCATCGAGGGTCTTGCTGCGGCAGCAGCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315869.8
CDS-3UTR CAA 90 bp CTCCCTTTCCCAGGAGACCTGGCTAGGACAGTCCCTAGGGGACAGGGTCGAGACCCTTCAAAAGGGCCTTaGCCTCGGTCTCAGAGATCT +
Preference number: 5 (lower is better)
Translates to: LPFPGDLARTVPRGQGRDPSKGP*PRSQRS
Trigger: AGATCTCTGAGACCGAGGCAAAGGCCCTTTTGAAGG...GTCTCGACCCTGTCCCCTAGGGACTGTCCTAGCCAGGTCTCCTGGGAAAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp ACCTGCACTGGGCGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCTGGGACCTCCATTACTaGACTCCTCTTCTGTGCCAG +
Preference number: 5 (lower is better)
Translates to: TCTGRFLWGRCRASSDSSWDLHY*TPLLCQ
Trigger: CTGGCACAGAAGAGGAGTCAAGTAATGGAGGTCCCA...GGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCGCCCAGTGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp ACCTGCACTGGGCGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTCCTCCCCAAAGCTGACAACCTaGGGTGTAGGTATGAGGGGT +
Preference number: 5 (lower is better)
Translates to: TCTGRFLWGRCRASSDSSPKLTT*GVGMRG
Trigger: ACCCCTCATACCTACACCCAAGGTTGTCAGCTTTGG...GGAGGAGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCGCCCAGTGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp TGCTTAGATGGGATGTTGCTGAGGGACAAGGGTGGGGCTGTGATCTCCACAAGCGGTCCTGGAGCCCCCTaGAGCGAAGGGGTAAGGGTT +
Preference number: 5 (lower is better)
Translates to: CLDGMLLRDKGGAVISTSGPGAP*SEGVRV
Trigger: AACCCTTACCCCTTCGCTCAAGGGGGCTCCAGGACC...GCTTGTGGAGATCACAGCCCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CAA 90 bp GCCCAAGGGTGGGGGCCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGCGGCTCTCCAGGTCTTaGGAGCGCTGCTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: AQGWGPLTPDIGLENSSMRLSRS*ERCCSF
Trigger: GAAGGAGCAGCAGCGCTCCAAAGACCTGGAGAGCCG...CATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGGCCCCCACCCTTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp TCCCCTTCCCCAAGAGCAAGGTTGGCTCAGAGCCCTCCTAGGTTAGGTCAGGTTGGTGGGGAACAGAGGTaGGGGTGGCCTAGATTCTCA +
Preference number: 5 (lower is better)
Translates to: SPSPRARLAQSPPRLGQVGGEQR*GWPRFS
Trigger: TGAGAATCTAGGCCACCCCAACCTCTGTTCCCCACC...AACCTGACCTAACCTAGGAGGGCTCTGAGCCAACCTTGCTCTTGGGGAAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp TGGGTCTCATCCTCACTTCTGTTCCTTGCCTGGGCAGAGCAGGGCAGGGTTCATGGTGGGGAACAGAGGTaGGGGTGGCCTAGATTCTCA +
Preference number: 5 (lower is better)
Translates to: WVSSSLLFLAWAEQGRVHGGEQR*GWPRFS
Trigger: TGAGAATCTAGGCCACCCCAACCTCTGTTCCCCACC...ATGAACCCTGCCCTGCTCTGCCCAGGCAAGGAACAGAAGTGAGGATGAGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp TTCCAGCGCATCTCCGGGTCACTGGACTTAGGGATGAGAGTGCCCAGTTCCTTGCCTTCAAAAGGGCCTTaGCCTCGGTCTCAGAGATCT +
Preference number: 5 (lower is better)
Translates to: FQRISGSLDLGMRVPSSLPSKGP*PRSQRS
Trigger: AGATCTCTGAGACCGAGGCAAAGGCCCTTTTGAAGG...CAAGGAACTGGGCACTCTCATCCCTAAGTCCAGTGACCCGGAGATGCGCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CAA 90 bp GAGCTTAAGTACCACTCCTCCCTGCAGTGTGGAATGCTTAGATGGGATGTTGCTCGGCTCTCCAGGTCTTaGGAGCGCTGCTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: ELKYHSSLQCGMLRWDVARLSRS*ERCCSF
Trigger: GAAGGAGCAGCAGCGCTCCAAAGACCTGGAGAGCCG...AGCAACATCCCATCTAAGCATTCCACACTGCAGGGAGGAGTGGTACTTAAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS TCA 90 bp AATGGTGCCCCATCACACTCCAAACCCTGGAAGCCGTCTCTGACCTaGCCCCTTAGGATTCCTCTCTTCCCTATGTCCCTCCGATTGATC +
Preference number: 5 (lower is better)
Translates to: NGAPSHSKPWKPSLT*PLRIPLFPMSLRLI
Trigger: GATCAATCGGAGGGACATAGGGAAGAGAGGAATCCTAAGGGGTCAGGTCAGAGACGGCTTCCAGGGTTTGGAGTGTGATGGGGCACCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495940.2
CDS TCA 90 bp CTTACAATGGTGCCCCATCACACTCCAAACCCTGGAAGCCGTCTCTaGCCTGACCCCTTAGGATTCCTCTCTTCCCTATGTCCCTCCGAT +
Preference number: 5 (lower is better)
Translates to: LTMVPHHTPNPGSRL*PDPLGFLSSLCPSD
Trigger: ATCGGAGGGACATAGGGAAGAGAGGAATCCTAAGGGGTCAGGTCAGAGACGGCTTCCAGGGTTTGGAGTGTGATGGGGCACCATTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495940.2
CDS-3UTR CAA 90 bp GGACTCTGCCCAAGGGTGGGGGCCTCTCACTCCAGATATAGGTCTGGAAAATTCTGGTGTGGCCACGCCTaGACTACTGTACACATCAAG +
Preference number: 5 (lower is better)
Translates to: GLCPRVGASHSRYRSGKFWCGHA*TTVHIK
Trigger: CTTGATGTGTACAGTAGTCAAGGCGTGGCCACACCA...GAATTTTCCAGACCTATATCTGGAGTGAGAGGCCCCCACCCTTGGGCAGAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp GAAATACCTGCACTGGGCGGTTCCTTTGGGGAAGGTGCAGGGCCTCATCTGACTATCCTGTCGTTAATGTaGAATCGCCTGCGACGCTCA +
Preference number: 5 (lower is better)
Translates to: EIPALGGSFGEGAGPHLTILSLM*NRLRRS
Trigger: TGAGCGTCGCAGGCGATTCAACATTAACGACAGGAT...AGTCAGATGAGGCCCTGCACCTTCCCCAAAGGAACCGCCCAGTGCAGGTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp GCCCAAGGGTGGGGGCCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGTGCTTAGATGGGATGTaGCTGAGGGACAAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: AQGWGPLTPDIGLENSSMCLDGM*LRDKGG
Trigger: CCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCA...CATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGGCCCCCACCCTTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS GCA 90 bp ATGGAGTATCCAGAGGAAAACTTCCCGCCTGGAATCTTACAATGGTaGCCCATCACACTCCAAACCCTGGAAGCCGTCTCTGACCTGACC +
Preference number: 5 (lower is better)
Translates to: MEYPEENFPPGILQW*PITLQTLEAVSDLT
Trigger: GGTCAGGTCAGAGACGGCTTCCAGGGTTTGGAGTGTGATGGGGCACCATTGTAAGATTCCAGGCGGGAAGTTTTCCTCTGGATACTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495940.2
CDS CCA 90 bp GGTATGGAGTATCCAGAGGAAAACTTCCCGCCTGGAATCTTACAATaGTGCCCCATCACACTCCAAACCCTGGAAGCCGTCTCTGACCTG +
Preference number: 5 (lower is better)
Translates to: GMEYPEENFPPGILQ*CPITLQTLEAVSDL
Trigger: CAGGTCAGAGACGGCTTCCAGGGTTTGGAGTGTGATGGGGCACCATTGTAAGATTCCAGGCGGGAAGTTTTCCTCTGGATACTCCATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495940.2
CDS-3UTR CAA 90 bp CTTCTGTGCCAGGACGGACTAGACTGGTGGTTCCAAGACAAAGGATGGAGCAACGTGATATTGGGAGGCTaGAGCGAAGGGGTAAGGGTT +
Preference number: 5 (lower is better)
Translates to: LLCQDGLDWWFQDKGWSNVILGG*SEGVRV
Trigger: AACCCTTACCCCTTCGCTCAAGCCTCCCAATATCAC...GTTGCTCCATCCTTTGTCTTGGAACCACCAGTCTAGTCCGTCCTGGCACAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315869.8
CDS-3UTR CAA 90 bp TTGTCTTTCTTCTGCCGTTCCTTCAAAAGGGCCTTTGCCTCGGTCTCAGAGATCTCAGCTGGGCAGGAGTaGCTGACAGTGATGGCTGGT +
Preference number: 5 (lower is better)
Translates to: LSFFCRSFKRAFASVSEISAGQE*LTVMAG
Trigger: ACCAGCCATCACTGTCAGCAACTCCTGCCCAGCTGA...GATCTCTGAGACCGAGGCAAAGGCCCTTTTGAAGGAACGGCAGAAGAAAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CAA 90 bp CTTCTGTGCCAGGACGGACTAGACTGGTGGTTCCAAGACAAAGGATGGAGCAACTCAGAGATCTCCCGTTaGATGTTGGGCAGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LLCQDGLDWWFQDKGWSNSEISR*MLGSSA
Trigger: AGCTGAGCTGCCCAACATCAAACGGGAGATCTCTGA...GTTGCTCCATCCTTTGTCTTGGAACCACCAGTCTAGTCCGTCCTGGCACAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp GCCCAAGGGTGGGGGCCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGTGGGACCTCCATTACTaGACTCCTCTTCTGTGCCAG +
Preference number: 5 (lower is better)
Translates to: AQGWGPLTPDIGLENSSMWDLHY*TPLLCQ
Trigger: CTGGCACAGAAGAGGAGTCAAGTAATGGAGGTCCCA...CATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGGCCCCCACCCTTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp TCCTGTGGTGCCTCCGGGCAGATAGCTGAGCATTTCATCATTGTAACTGGACTCTGCTTAGATGGGATGTaGCTGAGGGACAAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: SCGASGQIAEHFIIVTGLCLDGM*LRDKGG
Trigger: CCCACCCTTGTCCCTCAGCAACATCCCATCTAAGCA...GAGTCCAGTTACAATGATGAAATGCTCAGCTATCTGCCCGGAGGCACCACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS-3UTR CAA 90 bp AGTATACCCTCCATGGGGCCTGGCCCCAGCAATCCAAAGCTGACAACCTTGGGTCCTTCCTTCATCCTCTaGCCCTACATGTTGAAAAAG +
Preference number: 5 (lower is better)
Translates to: SIPSMGPGPSNPKLTTLGPSFIL*PYMLKK
Trigger: CTTTTTCAACATGTAGGGCAAGAGGATGAAGGAAGG...ACCCAAGGTTGTCAGCTTTGGATTGCTGGGGCCAGGCCCCATGGAGGGTATACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp CCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGAAATTTCATAATCTGAGCGCCATGGGGCTGTaGGGCGCACTGCCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: PLTPDIGLENSSMKFHNLSAMGL*GALPVG
Trigger: CCCCACAGGCAGTGCGCCCAACAGCCCCATGGCGCT...CAGATTATGAAATTTCATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp GAGCTTAAGTACCACTCCTCCCTGCAGTGTGGAATGCTTAGATGGGATGTTGCTCCAAAGCTGACAACCTaGGGTGTAGGTATGAGGGGT +
Preference number: 5 (lower is better)
Translates to: ELKYHSSLQCGMLRWDVAPKLTT*GVGMRG
Trigger: ACCCCTCATACCTACACCCAAGGTTGTCAGCTTTGG...AGCAACATCCCATCTAAGCATTCCACACTGCAGGGAGGAGTGGTACTTAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp TCCCCTTCCCCAAGAGCAAGGTTGGCTCAGAGCCCTCCTAGGTTAGGTCAGGTTCTCTTGCCCTACATGTaGAAAAAGAATACTGAGGTA +
Preference number: 5 (lower is better)
Translates to: SPSPRARLAQSPPRLGQVLLPYM*KKNTEV
Trigger: TACCTCAGTATTCTTTTTCAACATGTAGGGCAAGAG...AACCTGACCTAACCTAGGAGGGCTCTGAGCCAACCTTGCTCTTGGGGAAGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp GAGCTTAAGTACCACTCCTCCCTGCAGTGTGGAATGCTTAGATGGGATGTTGCTAGAGTGCCCAGTTCCTaGATCCTGTCGTTAATGTTG +
Preference number: 5 (lower is better)
Translates to: ELKYHSSLQCGMLRWDVARVPSS*ILSLML
Trigger: CAACATTAACGACAGGATCAAGGAACTGGGCACTCT...AGCAACATCCCATCTAAGCATTCCACACTGCAGGGAGGAGTGGTACTTAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp ACAAGCACTAGCGGTGGCCTGGTCCTACTGATTCTTTCACACCTGAAATACCTGCCTTCCTTCATCCTCTaGCCCTACATGTTGAAAAAG +
Preference number: 5 (lower is better)
Translates to: TSTSGGLVLLILSHLKYLPSFIL*PYMLKK
Trigger: CTTTTTCAACATGTAGGGCAAGAGGATGAAGGAAGG...CAGGTATTTCAGGTGTGAAAGAATCAGTAGGACCAGGCCACCGCTAGTGCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp CCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGAAATTTCATAATCTGTCTGACTCCTCCTCCTaGCCTGATTACAGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PLTPDIGLENSSMKFHNLSDSSS*PDYRGG
Trigger: CCCACCCCTGTAATCAGGCAAGGAGGAGGAGTCAGA...CAGATTATGAAATTTCATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp CCTCTCACTCCAGATATAGGTCTGGAAAATTCATCCATGAAATTTCATAATCTGTGGTGTGGCCACGCCTaGACTACTGTACACATCAAG +
Preference number: 5 (lower is better)
Translates to: PLTPDIGLENSSMKFHNLWCGHA*TTVHIK
Trigger: CTTGATGTGTACAGTAGTCAAGGCGTGGCCACACCA...CAGATTATGAAATTTCATGGATGAATTTTCCAGACCTATATCTGGAGTGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS-3UTR CAA 90 bp ATTGTAACTGGACTCCAGGCTGATGATCTCATCAATGACATCATCAATCTCCTTCTCTTGCCCTACATGTaGAAAAAGAATACTGAGGTA +
Preference number: 5 (lower is better)
Translates to: IVTGLQADDLINDIINLLLLPYM*KKNTEV
Trigger: TACCTCAGTATTCTTTTTCAACATGTAGGGCAAGAG...AAGGAGATTGATGATGTCATTGATGAGATCATCAGCCTGGAGTCCAGTTACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493583.5
CDS GCA 72 bp GCCGCGGCGGCCTGTTCCCGACGCTCACGCCTCTCCTaGTCCTGCGCCTGGGCCCGCATTAGCTGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: AAAACSRRSRLS*SCAWARISCCR
Trigger: GCGGCAGCAGCTAATGCGGGCCCAGGCGCAGGAGCAGGAGAGGCGTGAGCGTCGGGAACAGGCCGCCGCGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315869.8
ENST00000487451.1
ENST00000493583.5
CDS CCA 72 bp AGGGCCCTCCGCGCTGGCCTCTACGCCATCCCGAGCTaGTTCGGCCGCATGAGACATGACGCCCGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: RALRAGLYAIPS*FGRMRHDARPR
Trigger: CCGGGGCCGGGCGTCATGTCTCATGCGGCCGAACCAGCTCGGGATGGCGTAGAGGCCAGCGCGGAGGGCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS TCA 72 bp CTGGCCTCTACGCCATCCCGAGCTGGTTCGGCCGCATaGGACATGACGCCCGGCCCCGGGCGAGCCCTGCCA +
Preference number: 6 (lower is better)
Translates to: LASTPSRAGSAA*DMTPGPGRALP
Trigger: TGGCAGGGCTCGCCCGGGGCCGGGCGTCATGTCTCATGCGGCCGAACCAGCTCGGGATGGCGTAGAGGCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS CCA 72 bp CCAACAGCACGAACACGGCTCGAGGGCCCTCCGCGCTaGCCTCTACGCCATCCCGAGCTGGTTCGGCCGCAT +
Preference number: 6 (lower is better)
Translates to: PTARTRLEGPPR*PLRHPELVRPH
Trigger: ATGCGGCCGAACCAGCTCGGGATGGCGTAGAGGCCAGCGCGGAGGGCCCTCGAGCCGTGTTCGTGCTGTTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315869.8
ENST00000493583.5
CDS CCA 72 bp TGTTCCCGACGCTCACGCCTCTCCTGCTCCTGCGCCTaGGCCCGCATTAGCTGCTGCCGCAGCAAGACCCTC +
Preference number: 6 (lower is better)
Translates to: CSRRSRLSCSCA*ARISCCRSKTL
Trigger: GAGGGTCTTGCTGCGGCAGCAGCTAATGCGGGCCCAGGCGCAGGAGCAGGAGAGGCGTGAGCGTCGGGAACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315869.8
ENST00000487451.1
ENST00000493583.5
CDS GCA 72 bp CGCCTCTCCTGCTCCTGCGCCTGGGCCCGCATTAGCTaGTGCCGCAGCAAGACCCTCGATGAAGAAGATGAC +
Preference number: 6 (lower is better)
Translates to: RLSCSCAWARIS*CRSKTLDEEDD
Trigger: GTCATCTTCTTCATCGAGGGTCTTGCTGCGGCAGCAGCTAATGCGGGCCCAGGCGCAGGAGCAGGAGAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315869.8
ENST00000487451.1
ENST00000493583.5
CDS CCA 72 bp TTCAGACCAACCTCCCATCTCAGGGCCTCACCGTGCTaGGGAGCTGCAGTCCTGTGGTGCCTCCGGGCAGAT +
Preference number: 6 (lower is better)
Translates to: FRPTSHLRASPC*GAAVLWCLRAD
Trigger: ATCTGCCCGGAGGCACCACAGGACTGCAGCTCCCCAGCACGGTGAGGCCCTGAGATGGGAGGTTGGTCTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481606.1
CDS GCA 72 bp CTCTCCTGCTCCTGCGCCTGGGCCCGCATTAGCTGCTaGCGCAGCAAGACCCTCGATGAAGAAGATGACGAC +
Preference number: 6 (lower is better)
Translates to: LSCSCAWARISC*RSKTLDEEDDD
Trigger: GTCGTCATCTTCTTCATCGAGGGTCTTGCTGCGGCAGCAGCTAATGCGGGCCCAGGCGCAGGAGCAGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315869.8
ENST00000487451.1
ENST00000493583.5
CDS GCA 72 bp ATTTTCAGACCAACCTCCCATCTCAGGGCCTCACCGTaGTGGGGAGCTGCAGTCCTGTGGTGCCTCCGGGCA +
Preference number: 6 (lower is better)
Translates to: IFRPTSHLRASP*WGAAVLWCLRA
Trigger: TGCCCGGAGGCACCACAGGACTGCAGCTCCCCAGCACGGTGAGGCCCTGAGATGGGAGGTTGGTCTGAAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481606.1
CDS GCA 72 bp CTCCCTGTGGGGCCCAAGTGGGAGGCAAGCAGGAAATaGCACATGAGGAGTTTCTCAGGAGCTGAGGCGGGG +
Preference number: 6 (lower is better)
Translates to: LPVGPKWEASRK*HMRSFSGAEAG
Trigger: CCCCGCCTCAGCTCCTGAGAAACTCCTCATGTGGCATTTCCTGCTTGCCTCCCACTTGGGCCCCACAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495940.2
CDS CAA 90 bp AACCACTCCCATCTCAGGGCATCAATCCCAGCCGTGCCCTCTGCCTaGAATACTCTTACCCCCAGACACCCATGCGGCTCCCCGCCTTGC +
Preference number: 6 (lower is better)
Translates to: NHSHLRASIPAVPSA*NTLTPRHPCGSPPC
Trigger: GCAAGGCGGGGAGCCGCATGGGTGTCTGGGGGTAAGAGTATTCAAGGCAGAGGGCACGGCTGGGATTGATGCCCTGAGATGGGAGTGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495940.2
CDS CCA 72 bp GCCGCAGCAAGACCCTCGATGAAGAAGATGACGACATaGCAGGGGTCCTGGAGCCCCCTGCAGAAGACGATG +
Preference number: 6 (lower is better)
Translates to: AAARPSMKKMTT*QGSWSPLQKTM
Trigger: CATCGTCTTCTGCAGGGGGCTCCAGGACCCCTGCCATGTCGTCATCTTCTTCATCGAGGGTCTTGCTGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315869.8
CDS TCA 72 bp AAGCAGGAAATGCCACATGAGGAGTTTCTCAGGAGCTaGGGCGGGGATTGCACCAGGTGGGAGCCTCCCACC +
Preference number: 6 (lower is better)
Translates to: KQEMPHEEFLRS*GGDCTRWEPPT
Trigger: GGTGGGAGGCTCCCACCTGGTGCAATCCCCGCCTCAGCTCCTGAGAAACTCCTCATGTGGCATTTCCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495940.2
CDS CCA 72 bp GCCGCAGCAAGACCCTCGATGAAGAAGATGACGACATaGCAGGGGTCCTGGAGCCCCAGGAGAGCAGAAGAA +
Preference number: 6 (lower is better)
Translates to: AAARPSMKKMTT*QGSWSPRRAEE
Trigger: TTCTTCTGCTCTCCTGGGGCTCCAGGACCCCTGCCATGTCGTCATCTTCTTCATCGAGGGTCTTGCTGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487451.1
CDS CAA 72 bp CATCTCAGGGCATCAATCCCAGCCGTGCCCTCTGCCTaGAATACTCTTACCCCCAGACACCCATGCGGCTCC +
Preference number: 6 (lower is better)
Translates to: HLRASIPAVPSA*NTLTPRHPCGS
Trigger: GGAGCCGCATGGGTGTCTGGGGGTAAGAGTATTCAAGGCAGAGGGCACGGCTGGGATTGATGCCCTGAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495940.2
CDS GCA 72 bp GATGCAGAGAGTGTAGCTGGGGTGGCTGGTGTGGCCTaGAGTGATATTGGGAGGCTTGAGCGAAGGGGTAAG +
Preference number: 6 (lower is better)
Translates to: DAESVAGVAGVA*SDIGRLERRGK
Trigger: CTTACCCCTTCGCTCAAGCCTCCCAATATCACTGCAGGCCACACCAGCCACCCCAGCTACACTCTCTGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315869.8
CDS GCA 72 bp CCCTCTGCCTTGAATACTCTTACCCCCAGACACCCATaGGGCTCCCCGCCTTGCCTCCTTAGGCTCTTTATT +
Preference number: 6 (lower is better)
Translates to: PSALNTLTPRHP*GSPPCLLRLFI
Trigger: AATAAAGAGCCTAAGGAGGCAAGGCGGGGAGCCGCATGGGTGTCTGGGGGTAAGAGTATTCAAGGCAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495940.2
CDS TCA 72 bp CACCAGGTGGGAGCCTCCCACCACATGCTTAGAACTTaGGGCTGGGGTCTTTCAAAGGTATGGAGTATCCAG +
Preference number: 6 (lower is better)
Translates to: HQVGASHHMLRT*GWGLSKVWSIQ
Trigger: CTGGATACTCCATACCTTTGAAAGACCCCAGCCTCAAGTTCTAAGCATGTGGTGGGAGGCTCCCACCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495940.2
CDS GCA 72 bp CCAGAGGAAAACTTCCCGCCTGGAATCTTACAATGGTaGCCCATCACACTCCAAACCCTGGAAGCCGTCTCT +
Preference number: 6 (lower is better)
Translates to: PEENFPPGILQW*PITLQTLEAVS
Trigger: AGAGACGGCTTCCAGGGTTTGGAGTGTGATGGGGCACCATTGTAAGATTCCAGGCGGGAAGTTTTCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495940.2
CDS CCA 72 bp TATCCAGAGGAAAACTTCCCGCCTGGAATCTTACAATaGTGCCCCATCACACTCCAAACCCTGGAAGCCGTC +
Preference number: 6 (lower is better)
Translates to: YPEENFPPGILQ*CPITLQTLEAV
Trigger: GACGGCTTCCAGGGTTTGGAGTGTGATGGGGCACCATTGTAAGATTCCAGGCGGGAAGTTTTCCTCTGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495940.2
CDS CAA 90 bp CCGCCTTGCCTCCTTAGGCTCTTTATTCAAACGTTTCCTTGTCAGTaGGGGCCTGCCCTGTCCTCACCTTCCTTATCCCAAACTAACCCT +
Preference number: 6 (lower is better)
Translates to: PPCLLRLFIQTFPCQ*GPALSSPSLSQTNP
Trigger: AGGGTTAGTTTGGGATAAGGAAGGTGAGGACAGGGCAGGCCCCAACTGACAAGGAAACGTTTGAATAAAGAGCCTAAGGAGGCAAGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495940.2
CDS TCA 72 bp TTGGGAGGCTTGAGCGAAGGGGTAAGGGTTGGCTTTTaGGCTCGTAGAAGCTGTCAGGATCAAGGACGTTTT +
Preference number: 6 (lower is better)
Translates to: LGGLSEGVRVGF*ARRSCQDQGRF
Trigger: AAAACGTCCTTGATCCTGACAGCTTCTACGAGCTCAAAAGCCAACCCTTACCCCTTCGCTCAAGCCTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315869.8
CDS TCA 72 bp CCCTTAGGATTCCTCTCTTCCCTATGTCCCTCCGATTaGTCTCACTACAGCCACATTGGTCTCTCAGTGCTC +
Preference number: 6 (lower is better)
Translates to: PLGFLSSLCPSD*SHYSHIGLSVL
Trigger: GAGCACTGAGAGACCAATGTGGCTGTAGTGAGATCAATCGGAGGGACATAGGGAAGAGAGGAATCCTAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495940.2
CDS CAA 72 bp CCACCTCTCAACACAGTCCAACAAGGTCCAAAGGCATaGTTGACATACCCTGTTCTCGTCATAAGGCCTCCC +
Preference number: 6 (lower is better)
Translates to: PPLNTVQQGPKA*LTYPVLVIRPP
Trigger: GGGAGGCCTTATGACGAGAACAGGGTATGTCAACAATGCCTTTGGACCTTGTTGGACTGTGTTGAGAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481606.1
CDS CAA 72 bp CCCCTTAGGATTCCTCTCTTCCCTATGTCCCTCCGATaGATCTCACTACAGCCACATTGGTCTCTCAGTGCT +
Preference number: 6 (lower is better)
Translates to: PLRIPLFPMSLR*ISLQPHWSLSA
Trigger: AGCACTGAGAGACCAATGTGGCTGTAGTGAGATCAATCGGAGGGACATAGGGAAGAGAGGAATCCTAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495940.2
CDS CAA 72 bp CCTCTCAACACAGTCCAACAAGGTCCAAAGGCATTGTaGACATACCCTGTTCTCGTCATAAGGCCTCCCTCT +
Preference number: 6 (lower is better)
Translates to: PLNTVQQGPKAL*TYPVLVIRPPS
Trigger: AGAGGGAGGCCTTATGACGAGAACAGGGTATGTCAACAATGCCTTTGGACCTTGTTGGACTGTGTTGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481606.1
CDS CAA 90 bp CTACATGGTCCACCTCTCAACACAGTCCAACAAGGTCCAAAGGCATaGTTGACATACCCTGTTCTCGTCATAAGGCCTCCCTCTCTATCT +
Preference number: 6 (lower is better)
Translates to: LHGPPLNTVQQGPKA*LTYPVLVIRPPSLS
Trigger: AGATAGAGAGGGAGGCCTTATGACGAGAACAGGGTATGTCAACAATGCCTTTGGACCTTGTTGGACTGTGTTGAGAGGTGGACCATGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481606.1
CDS CCA 72 bp CAAAGGTATGGAGTATCCAGAGGAAAACTTCCCGCCTaGAATCTTACAATGGTGCCCCATCACACTCCAAAC +
Preference number: 6 (lower is better)
Translates to: QRYGVSRGKLPA*NLTMVPHHTPN
Trigger: GTTTGGAGTGTGATGGGGCACCATTGTAAGATTCCAGGCGGGAAGTTTTCCTCTGGATACTCCATACCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495940.2
CDS CAA 90 bp TCAAGGCAAGGGTCTCCTATACACACAGCCAGACTGAGTATGGTCTaGGTGATACAGAAATGCCCTAATTTTCAGACCAACCTCCCATCT +
Preference number: 6 (lower is better)
Translates to: SRQGSPIHTARLSMV*VIQKCPNFQTNLPS
Trigger: AGATGGGAGGTTGGTCTGAAAATTAGGGCATTTCTGTATCACCAAGACCATACTCAGTCTGGCTGTGTGTATAGGAGACCCTTGCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481606.1
CDS CCA 72 bp CCTATGTCCCTCCGATTGATCTCACTACAGCCACATTaGTCTCTCAGTGCTCCTAGAATATGGAAAACCACT +
Preference number: 6 (lower is better)
Translates to: PMSLRLISLQPH*SLSAPRIWKTT
Trigger: AGTGGTTTTCCATATTCTAGGAGCACTGAGAGACCAATGTGGCTGTAGTGAGATCAATCGGAGGGACATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495940.2
CDS CAA 72 bp GGGTCTCCTATACACACAGCCAGACTGAGTATGGTCTaGGTGATACAGAAATGCCCTAATTTTCAGACCAAC +
Preference number: 6 (lower is better)
Translates to: GSPIHTARLSMV*VIQKCPNFQTN
Trigger: GTTGGTCTGAAAATTAGGGCATTTCTGTATCACCAAGACCATACTCAGTCTGGCTGTGTGTATAGGAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481606.1