Pregenerated sensors for TFDP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000198176Ensembl transcript IDs: ENST00000464794.5, ENST00000465174.1, ENST00000494812.1, ENST00000544902.5
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCCAGTATTTTCCACACTGCGCCACGGAGCAGGACATCCCGCTGTaGAGTCACATAAGCCTGTCTTCTCTGTCACGTATGGCTCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: VQYFPHCATEQDIPL*SHISLSSLSRMAPE Trigger: CTCTGGAGCCATACGTGACAGAGAAGACAGGCTTATGTGACTGCACAGCGGGATGTCCTGCTCCGTGGCGCAGTGTGGAAAATACTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544902.5 |
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| 3UTR GCA 90 bp | GTAGAAGCTTCCGGATATCCTTCGCTTGTCCAGTATTTTCCACACTaGGCCACGGAGCAGGACATCCCGCTGTGCAGTCACATAAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: VEASGYPSLVQYFPH*ATEQDIPLCSHISL Trigger: CAGGCTTATGTGACTGCACAGCGGGATGTCCTGCTCCGTGGCGCAGTGTGGAAAATACTGGACAAGCGAAGGATATCCGGAAGCTTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544902.5 |
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| 3UTR GCA 72 bp | TCCGGATATCCTTCGCTTGTCCAGTATTTTCCACACTaGGCCACGGAGCAGGACATCCCGCTGTGCAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: SGYPSLVQYFPH*ATEQDIPLCSH Trigger: GTGACTGCACAGCGGGATGTCCTGCTCCGTGGCGCAGTGTGGAAAATACTGGACAAGCGAAGGATATCCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544902.5 |
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| 3UTR GCA 72 bp | TTTCCACACTGCGCCACGGAGCAGGACATCCCGCTGTaGAGTCACATAAGCCTGTCTTCTCTGTCACGTATG | + |
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Preference number: 3 (lower is better) Translates to: FPHCATEQDIPL*SHISLSSLSRM Trigger: CATACGTGACAGAGAAGACAGGCTTATGTGACTGCACAGCGGGATGTCCTGCTCCGTGGCGCAGTGTGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544902.5 |
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| 3UTR TCA 72 bp | ATTTCTGAAAAGGGAAAGAAAATAAGCGAATGGTCATaGAACAGAAACAACACAAGACGCACAGGCAACCAA | + |
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Preference number: 3 (lower is better) Translates to: ISEKGKKISEWS*NRNNTRRTGNQ Trigger: TTGGTTGCCTGTGCGTCTTGTGTTGTTTCTGTTTCATGACCATTCGCTTATTTTCTTTCCCTTTTCAGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544902.5 |
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| CDS-3UTR TCA 90 bp | GCTTCCGGATATCCTTCGCTTGTCCAGTATTTTCCACACTGCGCCACGGAGCAGCCTCGTCATTCTCGTTaGAGTCATCGTCCTCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: ASGYPSLVQYFPHCATEQPRHSR*SHRPPR Trigger: ACGAGGAGGACGATGACTTCAACGAGAATGACGAGG...CTGCTCCGTGGCGCAGTGTGGAAAATACTGGACAAGCGAAGGATATCCGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544902.5 |
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| CDS-3UTR GCA 90 bp | GCAGGACATCCCGCTGTGCAGTCACATAAGCCTGTCTTCTCTGTCACGTATGGCCAGGACATCCCGCTGTaGAGTCACATAAGCCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: AGHPAVQSHKPVFSVTYGQDIPL*SHISLS Trigger: AGACAGGCTTATGTGACTGCACAGCGGGATGTCCTG...GCCATACGTGACAGAGAAGACAGGCTTATGTGACTGCACAGCGGGATGTCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544902.5 |
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| CDS-3UTR TCA 90 bp | CATCCCGCTGTGCAGTCACATAAGCCTGTCTTCTCTGTCACGTATGGCTCCAGAAGGCAACCAACAAAATaGCGCGCAGTTCCACAGGAC | + |
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Preference number: 4 (lower is better) Translates to: HPAVQSHKPVFSVTYGSRRQPTK*RAVPQD Trigger: GTCCTGTGGAACTGCGCGTCATTTTGTTGGTTGCCT...TCTGGAGCCATACGTGACAGAGAAGACAGGCTTATGTGACTGCACAGCGGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544902.5 |
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| CDS-3UTR GCA 90 bp | AGAAGCTTCCGGATATCCTTCGCTTGTCCAGTATTTTCCACACTGCGCCACGGATCTCTCCTTTCCTGTTaGGCTTCCACTTGCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RSFRISFACPVFSTLRHGSLLSC*ASTCWA Trigger: TGCCCAGCAAGTGGAAGCGCAACAGGAAAGGAGAGA...TCCGTGGCGCAGTGTGGAAAATACTGGACAAGCGAAGGATATCCGGAAGCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544902.5 |
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| CDS-3UTR GCA 90 bp | GGGAAAGAAAATAAGCGAATGGTCATGAAACAGAAACAACACAAGACGCACAGGCAGTATTTTCCACACTaGGCCACGGAGCAGGACATC | + |
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Preference number: 4 (lower is better) Translates to: GKENKRMVMKQKQHKTHRQYFPH*ATEQDI Trigger: GATGTCCTGCTCCGTGGCGCAGTGTGGAAAATACTG...CCTGTGCGTCTTGTGTTGTTTCTGTTTCATGACCATTCGCTTATTTTCTTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544902.5 |
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| CDS-3UTR TCA 90 bp | GTAGAAGCTTCCGGATATCCTTCGCTTGTCCAGTATTTTCCACACTGCGCCACGATAAGCGAATGGTCATaGAACAGAAACAACACAAGA | + |
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Preference number: 4 (lower is better) Translates to: VEASGYPSLVQYFPHCATISEWS*NRNNTR Trigger: TCTTGTGTTGTTTCTGTTTCATGACCATTCGCTTAT...CGTGGCGCAGTGTGGAAAATACTGGACAAGCGAAGGATATCCGGAAGCTTCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544902.5 |
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| CDS TCA 90 bp | GGAGGCTGGCGTCAACGCGCGTGGGAGCCCCATCGCACGACTGTGTaGCACACGTGGCCCAGGAGAACGTGGAGGTGCGAACCGCAAGCA | + |
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Preference number: 5 (lower is better) Translates to: GGWRQRAWEPHRTTV*HTWPRRTWRCEPQA Trigger: TGCTTGCGGTTCGCACCTCCACGTTCTCCTGGGCCACGTGTGTCACACAGTCGTGCGATGGGGCTCCCACGCGCGTTGACGCCAGCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465174.1 |
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| CDS CCA 90 bp | CCCATCACCACCCAACTGCAGTGTGGTATCCAAGGCCACAACTTGTaGGTGGTGACCGCAGCTTCAGAGATCAGATCCTTCCATCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: PITTQLQCGIQGHNL*VVTAASEIRSFHLS Trigger: TGAAAGATGGAAGGATCTGATCTCTGAAGCTGCGGTCACCACCCACAAGTTGTGGCCTTGGATACCACACTGCAGTTGGGTGGTGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464794.5 |
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| CDS-3UTR CAA 90 bp | GTAGAAGCTTCCGGATATCCTTCGCTTGTCCAGTATTTTCCACACTGCGCCACGTTCTCTCCTTTCCTGTaGCGCTTCCACTTGCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: VEASGYPSLVQYFPHCATFSPFL*RFHLLG Trigger: GCCCAGCAAGTGGAAGCGCAACAGGAAAGGAGAGAA...CGTGGCGCAGTGTGGAAAATACTGGACAAGCGAAGGATATCCGGAAGCTTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544902.5 |
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| CDS TCA 90 bp | CCACCCAACTGCAGTGTGGTATCCAAGGCCACAACTTGTGGGTGGTaGCCGCAGCTTCAGAGATCAGATCCTTCCATCTTTCACCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: PPNCSVVSKATTCGW*PQLQRSDPSIFHLH Trigger: ATGAAGGTGAAAGATGGAAGGATCTGATCTCTGAAGCTGCGGTCACCACCCACAAGTTGTGGCCTTGGATACCACACTGCAGTTGGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464794.5 |
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| CDS-3UTR CAA 90 bp | GCTTCCGGATATCCTTCGCTTGTCCAGTATTTTCCACACTGCGCCACGGAGCAGCCGGATATCCTTCGCTaGTCCAGTATTTTCCACACT | + |
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Preference number: 5 (lower is better) Translates to: ASGYPSLVQYFPHCATEQPDILR*SSIFHT Trigger: AGTGTGGAAAATACTGGACAAGCGAAGGATATCCGG...CTGCTCCGTGGCGCAGTGTGGAAAATACTGGACAAGCGAAGGATATCCGGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544902.5 |
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| CDS TCA 72 bp | CGTCAACGCGCGTGGGAGCCCCATCGCACGACTGTGTaGCACACGTGGCCCAGGAGAACGTGGAGGTGCGAA | + |
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Preference number: 6 (lower is better) Translates to: RQRAWEPHRTTV*HTWPRRTWRCE Trigger: TTCGCACCTCCACGTTCTCCTGGGCCACGTGTGTCACACAGTCGTGCGATGGGGCTCCCACGCGCGTTGACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465174.1 |
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| CDS CAA 72 bp | ACCACCCAACTGCAGTGTGGTATCCAAGGCCACAACTaGTGGGTGGTGACCGCAGCTTCAGAGATCAGATCC | + |
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Preference number: 6 (lower is better) Translates to: TTQLQCGIQGHN*WVVTAASEIRS Trigger: GGATCTGATCTCTGAAGCTGCGGTCACCACCCACAAGTTGTGGCCTTGGATACCACACTGCAGTTGGGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464794.5 |
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| CDS CAA 90 bp | CACCCCATCACCACCCAACTGCAGTGTGGTATCCAAGGCCACAACTaGTGGGTGGTGACCGCAGCTTCAGAGATCAGATCCTTCCATCTT | + |
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Preference number: 6 (lower is better) Translates to: HPITTQLQCGIQGHN*WVVTAASEIRSFHL Trigger: AAGATGGAAGGATCTGATCTCTGAAGCTGCGGTCACCACCCACAAGTTGTGGCCTTGGATACCACACTGCAGTTGGGTGGTGATGGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464794.5 |
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| CDS CCA 72 bp | ACCCAACTGCAGTGTGGTATCCAAGGCCACAACTTGTaGGTGGTGACCGCAGCTTCAGAGATCAGATCCTTC | + |
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Preference number: 6 (lower is better) Translates to: TQLQCGIQGHNL*VVTAASEIRSF Trigger: GAAGGATCTGATCTCTGAAGCTGCGGTCACCACCCACAAGTTGTGGCCTTGGATACCACACTGCAGTTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464794.5 |
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| CDS CCA 72 bp | TCCCTGAGCCATTTCTTAAAGCCATCCTGCTGTCAGTaGCTGGGACCCTACGGCCCCCAAGGAAAGAATTCA | + |
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Preference number: 6 (lower is better) Translates to: SLSHFLKPSCCQ*LGPYGPQGKNS Trigger: TGAATTCTTTCCTTGGGGGCCGTAGGGTCCCAGCCACTGACAGCAGGATGGCTTTAAGAAATGGCTCAGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494812.1 |
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