Pregenerated sensors for TFAP2C (Homo sapiens)
Ensembl gene IDs: ENSG00000087510Ensembl transcript IDs: ENST00000201031.3, ENST00000416606.1
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGAGTTCAATTCCAAATCTCCATTTCACCCACACACACTGTACTaGACACTCACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGT | + |
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Preference number: 1 (lower is better) Translates to: REFNSKSPFHPHTLY*TLTLGFSPTGTRQS Trigger: ACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGTGAGTGTGCAGTACAGTGTGTGTGGGTGAAATGGAGATTTGGAATTGAACTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| 3UTR CAA 90 bp | CCCAGGCCAGGAGGGGTTCCCAGTCTGTGCGGTGGAGAAGGATTTTaGCAGTCCTGTTCCTTCCCTACTCTCCTAACCTTTCTTCGTTCC | + |
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Preference number: 2 (lower is better) Translates to: PRPGGVPSLCGGEGF*QSCSFPTLLTFLRS Trigger: GGAACGAAGAAAGGTTAGGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTGGGAACCCCTCCTGGCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| 3UTR-3UTR CCA 90 bp | ACACTGTACTGCACACTCACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTCCCAGTCTGTGCGGTaGAGAAGGATTTTTGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: TLYCTLTLGFSPTGTRQSSQSVR*RRIFAV Trigger: GACTGCAAAAATCCTTCTCCACCGCACAGACTGGGA...ACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGTGAGTGTGCAGTACAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGATAATAGGTCCAAAGTTAGGAGATAGCTCAGCGCTAGAGAAACAACTAAAGTCCAGGGGCGGGTaGTGCAGAACCAGTGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LLIIGPKLGDSSALEKQLKSRGG*CRTSEG Trigger: GCCTTCACTGGTTCTGCATCACCCGCCCCTGGACTT...TAGTTGTTTCTCTAGCGCTGAGCTATCTCCTAACTTTGGACCTATTATCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| 3UTR-3UTR GCA 90 bp | TGCACACTCACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTATTGCTTTGTGGAGAAGGATTTTTaGAGTCCTGTTCCTTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: CTLTLGFSPTGTRQSYCFVEKDF*SPVPSL Trigger: TAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCAC...AAAGCAATAACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGTGAGTGTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| 3UTR-3UTR TCA 90 bp | ACACTGTACTGCACACTCACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTGTATTGTTGATCTGTTaGTCTAGGGCACATCAATTT | + |
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Preference number: 2 (lower is better) Translates to: TLYCTLTLGFSPTGTRQSVLLIC*SRAHQF Trigger: AAATTGATGTGCCCTAGATCAACAGATCAACAATAC...ACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGTGAGTGTGCAGTACAGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| 3UTR-3UTR CAA 90 bp | ACACTGTACTGCACACTCACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTAAGCAGATAGAACCTTaGCCTCCTACCAGAGGACTT | + |
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Preference number: 3 (lower is better) Translates to: TLYCTLTLGFSPTGTRQSKQIEP*PPTRGL Trigger: AAGTCCTCTGGTAGGAGGCAAAGGTTCTATCTGCTT...ACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGTGAGTGTGCAGTACAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| 3UTR GCA 72 bp | AATTCCAAATCTCCATTTCACCCACACACACTGTACTaGACACTCACCTTAGGGTTCAGCCCAACAGGAACG | + |
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Preference number: 3 (lower is better) Translates to: NSKSPFHPHTLY*TLTLGFSPTGT Trigger: CGTTCCTGTTGGGCTGAACCCTAAGGTGAGTGTGCAGTACAGTGTGTGTGGGTGAAATGGAGATTTGGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| 3UTR-3UTR CAA 90 bp | CTTCTGATAATAGGTCCAAAGTTAGGAGATAGCTCAGCGCTAGAGAAACAACTAGGTGGAGAAGGATTTTaGCAGTCCTGTTCCTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: LLIIGPKLGDSSALEKQLGGEGF*QSCSFP Trigger: AGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACC...TAGTTGTTTCTCTAGCGCTGAGCTATCTCCTAACTTTGGACCTATTATCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| 3UTR-3UTR CAA 90 bp | ACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTATTGCTTTCTGAACAGAATAAAGAGCCAGTACTaGTCACCTTCTGATAATAGG | + |
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Preference number: 3 (lower is better) Translates to: TLGFSPTGTRQSYCFLNRIKSQY*SPSDNR Trigger: CCTATTATCAGAAGGTGACAAGTACTGGCTCTTTAT...TCTGTTCAGAAAGCAATAACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR GCA 90 bp | CCAGGAGGGGTTCCCAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCGGCATCCAGGGCGTGTaGGTGGGGCAGCAGCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: PGGVPSLCGGEGFLQSCSGIQGV*VGQQQV Trigger: GACCTGCTGCTGCCCCACGCACACGCCCTGGATGCC...GGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTGGGAACCCCTCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR CCA 90 bp | CCAGGAGGGGTTCCCAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTCCAGGGCGTGTGCGTaGGGCAGCAGCAGGTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: PGGVPSLCGGEGFLQSCSSRACA*GSSRSE Trigger: CTCCGACCTGCTGCTGCCCCACGCACACGCCCTGGA...GGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTGGGAACCCCTCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR GCA 90 bp | CAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCTGTGGGCGCCGGCTGGTaGAGGGGGTTGATGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: QSVRWRRIFAVLFLPYSPVGAGW*RGLMAA Trigger: CGCCGCCATCAACCCCCTGCACCAGCCGGCGCCCAC...AGGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR GCA 90 bp | CCAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCAGGCCTGCTGCTGGCTaGCTGTGGGCGCCGGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: PVCAVEKDFCSPVPSLLSRPAAG*LWAPAG Trigger: ACCAGCCGGCGCCCACAGGCAGCCAGCAGCAGGCCT...GGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR CCA 90 bp | CAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCTGCTGCTGGCTGCCTGTaGGCGCCGGCTGGTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: QSVRWRRIFAVLFLPYSPAAGCL*APAGAG Trigger: CCCTGCACCAGCCGGCGCCCACAGGCAGCCAGCAGC...AGGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR TCA 90 bp | CCAGGAGGGGTTCCCAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCGTCAGGAGAGTCACATaGGCGGCTTTCCGCCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: PGGVPSLCGGEGFLQSCSVRRVT*AAFRLP Trigger: CGGGAGGCGGAAAGCCGCTCATGTGACTCTCCTGAC...GGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTGGGAACCCCTCCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR CCA 90 bp | ACACTGTACTGCACACTCACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTCCAGCCCGGAGAGGTaGGGCAGTAGGCCGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: TLYCTLTLGFSPTGTRQSSSPER*GSRPAG Trigger: CCCGGCCGGCCTACTGCCCCACCTCTCCGGGCTGGA...ACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGTGAGTGTGCAGTACAGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR GCA 90 bp | CCAGGAGGGGTTCCCAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCGCGGATTCCCATTGCTaGTCCCGTCGTGGCGATCCT | + |
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Preference number: 4 (lower is better) Translates to: PGGVPSLCGGEGFLQSCSADSHC*SRRGDP Trigger: AGGATCGCCACGACGGGAGCAGCAATGGGAATCCGC...GGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTGGGAACCCCTCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR GCA 90 bp | CAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCTACGCATCGGCGGCTCTaGGAGCGTAGATGCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: QSVRWRRIFAVLFLPYSPTHRRL*ERRCCR Trigger: GCGGCAGCATCTACGCTCGCAGAGCCGCCGATGCGT...AGGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR CCA 90 bp | ACACTGTACTGCACACTCACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTCTGGGGCGAGCCTGCTaGTCCCATGGGGTGTCCGGT | + |
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Preference number: 4 (lower is better) Translates to: TLYCTLTLGFSPTGTRQSLGRAC*SHGVSG Trigger: ACCGGACACCCCATGGGACCAGCAGGCTCGCCCCAG...ACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGTGAGTGTGCAGTACAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR CCA 90 bp | CCAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCACACCGCGGCACAGATaGCCTGGCTGCCAAACCCGT | + |
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Preference number: 4 (lower is better) Translates to: PVCAVEKDFCSPVPSLLSTPRHR*PGCQTR Trigger: ACGGGTTTGGCAGCCAGGCCATCTGTGCCGCGGTGT...GGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR TCA 90 bp | TGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCTAACCTTTAAATCGGGGTCACGGTaGCCAGGCGTCTGCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: CGGEGFLQSCSFPTLLTFKSGSR*PGVCRR Trigger: GCGGCGGCAGACGCCTGGTCACCGTGACCCCGATTT...AAAGGTTAGGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR TCA 90 bp | CAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCTACCTCGTCCATCTGGTaGGGCATGTCGTGGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: QSVRWRRIFAVLFLPYSPTSSIW*GMSWSP Trigger: GGGGCTCCACGACATGCCTCACCAGATGGACGAGGT...AGGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR GCA 90 bp | TGCACACTCACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTATTGCTTTGCCGCGCGCGGGCCTTaGTGTCCGGGTCACTGGACA | + |
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Preference number: 4 (lower is better) Translates to: CTLTLGFSPTGTRQSYCFAARGP*CPGHWT Trigger: TGTCCAGTGACCCGGACAGCAAGGCCCGCGCGCGGC...AAAGCAATAACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGTGAGTGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR GCA 90 bp | ACACTGTACTGCACACTCACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTAGACTGGGGCGAGCCTaGTGGTCCCATGGGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: TLYCTLTLGFSPTGTRQSRLGRA*WSHGVS Trigger: GGACACCCCATGGGACCAGCAGGCTCGCCCCAGTCT...ACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGTGAGTGTGCAGTACAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR CCA 90 bp | TGCACACTCACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTATTGCTTTCCGGCGGAGGAGAGGTaGGGGACCCGCGGATTCCCA | + |
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Preference number: 4 (lower is better) Translates to: CTLTLGFSPTGTRQSYCFPAEER*GTRGFP Trigger: TGGGAATCCGCGGGTCCCCCACCTCTCCTCCGCCGG...AAAGCAATAACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGTGAGTGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR GCA 90 bp | ACACTGTACTGCACACTCACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTCCCGCGGATTCCCATTaGTGCTCCCGTCGTGGCGAT | + |
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Preference number: 4 (lower is better) Translates to: TLYCTLTLGFSPTGTRQSPADSH*CSRRGD Trigger: ATCGCCACGACGGGAGCAGCAATGGGAATCCGCGGG...ACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGTGAGTGTGCAGTACAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR CCA 90 bp | ACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTATTGCTTTCTGAACAGACCTGTGGGCGCCGGCTaGTGCAGGGGGTTGATGGCG | + |
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Preference number: 4 (lower is better) Translates to: TLGFSPTGTRQSYCFLNRPVGAG*CRGLMA Trigger: CGCCATCAACCCCCTGCACCAGCCGGCGCCCACAGG...TCTGTTCAGAAAGCAATAACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR CCA 90 bp | ACACTGTACTGCACACTCACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTGTTCGTCTCCAAGACTaGGGCGAGCCTGCTGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: TLYCTLTLGFSPTGTRQSVRLQD*GEPAGP Trigger: GGGACCAGCAGGCTCGCCCCAGTCTTGGAGACGAAC...ACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGTGAGTGTGCAGTACAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR TCA 90 bp | ACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTATTGCTTTCTGAACAGAGCTGGTGCAGGGGGTTaGTGGCGGCGGCGTACGCTT | + |
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Preference number: 4 (lower is better) Translates to: TLGFSPTGTRQSYCFLNRAGAGG*WRRRTL Trigger: AAGCGTACGCCGCCGCCATCAACCCCCTGCACCAGC...TCTGTTCAGAAAGCAATAACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR GCA 90 bp | CCAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCTCGTGCAGCAACAGGTaGTGGTCGTCGACATTCTGC | + |
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Preference number: 4 (lower is better) Translates to: PVCAVEKDFCSPVPSLLSSCSNR*WSSTFC Trigger: GCAGAATGTCGACGACCAGCACCTGTTGCTGCACGA...GGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR GCA 90 bp | CCAGGAGGGGTTCCCAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCCCACACACACTGTACTaGACACTCACCTTAGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: PGGVPSLCGGEGFLQSCSPHTLY*TLTLGF Trigger: GAACCCTAAGGTGAGTGTGCAGTACAGTGTGTGTGG...GGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTGGGAACCCCTCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR CCA 90 bp | CCAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCAGCAGAAGACCTCAGTaGGGTTCATTACGGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: PVCAVEKDFCSPVPSLLSSRRPQ*GSLRPP Trigger: TGGGGGCCGTAATGAACCCCACTGAGGTCTTCTGCT...GGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR CCA 90 bp | TGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCTAACCTTTAGCCTGCTGGTCCCATaGGGTGTCCGGTCTTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: CGGEGFLQSCSFPTLLTFSLLVP*GVRSWL Trigger: CAGCCAAGACCGGACACCCCATGGGACCAGCAGGCT...AAAGGTTAGGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR TCA 90 bp | CAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCTCAGAAGGCCCCCGTTTaGACACGGGGTTTAGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: QSVRWRRIFAVLFLPYSPQKAPV*TRGLEC Trigger: ACACTCTAAACCCCGTGTTCAAACGGGGGCCTTCTG...AGGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| 3UTR CAA 72 bp | GGAGGGGTTCCCAGTCTGTGCGGTGGAGAAGGATTTTaGCAGTCCTGTTCCTTCCCTACTCTCCTAACCTTT | + |
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Preference number: 4 (lower is better) Translates to: GGVPSLCGGEGF*QSCSFPTLLTF Trigger: AAAGGTTAGGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTGGGAACCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR TCA 90 bp | CAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCTTTGCGAATGACTGTCTaGTCGTGCAGCAACAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: QSVRWRRIFAVLFLPYSPLRMTV*SCSNRC Trigger: GCACCTGTTGCTGCACGATCAGACAGTCATTCGCAA...AGGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR TCA 90 bp | GTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCTAACCTTCAATCTTCCAGGGACTaGGCAGAAGACCTCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: VRWRRIFAVLFLPYSPNLQSSRD*AEDLSG Trigger: CCCACTGAGGTCTTCTGCTCAGTCCCTGGAAGATTG...AAGGTTAGGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR TCA 90 bp | CCAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCTCGATTTGGCTCTTCTaGGAACACCTCCCAGTAACG | + |
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Preference number: 4 (lower is better) Translates to: PVCAVEKDFCSPVPSLLSSIWLF*EHLPVT Trigger: CGTTACTGGGAGGTGTTCTCAGAAGAGCCAAATCGA...GGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR GCA 90 bp | TGCACACTCACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTATTGCTTTTGCGAGCGTAGATGCTaGCGCCGCGAGTGTCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: CTLTLGFSPTGTRQSYCFCERRC*RRECQD Trigger: GTCTTGACACTCGCGGCGGCAGCATCTACGCTCGCA...AAAGCAATAACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGTGAGTGTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR CCA 90 bp | ACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTATTGCTTTCTGAACAGATGCTGTCCGGGTCACTaGACACGCATCGGCGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: TLGFSPTGTRQSYCFLNRCCPGH*TRIGGS Trigger: AGAGCCGCCGATGCGTGTCCAGTGACCCGGACAGCA...TCTGTTCAGAAAGCAATAACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR CCA 90 bp | TGCACACTCACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTATTGCTTTTTGCTGCTCCCGTCGTaGCGATCCTCGCAGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: CTLTLGFSPTGTRQSYCFLLLPS*RSSQSS Trigger: AGAGGACTGCGAGGATCGCCACGACGGGAGCAGCAA...AAAGCAATAACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGTGAGTGTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR CCA 90 bp | ACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTATTGCTTTCTGAACAGAGCGGCACAGATGGCCTaGCTGCCAAACCCGTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: TLGFSPTGTRQSYCFLNRAAQMA*LPNPWV Trigger: TACCCACGGGTTTGGCAGCCAGGCCATCTGTGCCGC...TCTGTTCAGAAAGCAATAACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR TCA 90 bp | ACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTATTGCTTTCTGAACAGAAAGTCCAGGGGCGGGTaGTGCAGAACCAGTGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: TLGFSPTGTRQSYCFLNRKSRGG*CRTSEG Trigger: GCCTTCACTGGTTCTGCATCACCCGCCCCTGGACTT...TCTGTTCAGAAAGCAATAACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR CCA 90 bp | CCAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCGAGGGTTCTTGGTCATaGAAATGGGACCTTTGCGAA | + |
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Preference number: 4 (lower is better) Translates to: PVCAVEKDFCSPVPSLLSEGSWS*KWDLCE Trigger: TTCGCAAAGGTCCCATTTCCATGACCAAGAACCCTC...GGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR GCA 90 bp | TGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCTAACCTTTGGGGTTCCCAGTCTGTaGGGTGGAGAAGGATTTTTG | + |
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Preference number: 4 (lower is better) Translates to: CGGEGFLQSCSFPTLLTFGVPSL*GGEGFL Trigger: CAAAAATCCTTCTCCACCGCACAGACTGGGAACCCC...AAAGGTTAGGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS-3UTR CCA 90 bp | ACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTATTGCTTTCTGAACAGAAGGGGGAAAGTAGGGTaGCGGCTGATATTCGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLGFSPTGTRQSYCFLNRRGKVG*RLIFGD Trigger: GTCGCCGAATATCAGCCGCCACCCTACTTTCCCCCT...TCTGTTCAGAAAGCAATAACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CCA 90 bp | TGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCTAACCTTTCAATGGCTAAGTGTGTaGGTCTGTTGGCCCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CGGEGFLQSCSFPTLLTFQWLSV*VCWPRE Trigger: TTCCCTGGGCCAACAGACCCACACACTTAGCCATTG...AAAGGTTAGGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR GCA 90 bp | CTTCTGATAATAGGTCCAAAGTTAGGAGATAGCTCAGCGCTAGAGAAACAACTACTCTGCGAGCGTAGATaGTGCCGCCGCGAGTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLIIGPKLGDSSALEKQLLCERR*CRRECQ Trigger: TTGACACTCGCGGCGGCAGCATCTACGCTCGCAGAG...TAGTTGTTTCTCTAGCGCTGAGCTATCTCCTAACTTTGGACCTATTATCAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CCA 90 bp | ACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTATTGCTTTCTGAACAGATGCAGCAACAGGTGCTaGTCGTCGACATTCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TLGFSPTGTRQSYCFLNRCSNRC*SSTFCT Trigger: GGTGCAGAATGTCGACGACCAGCACCTGTTGCTGCA...TCTGTTCAGAAAGCAATAACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR TCA 90 bp | ACACTGTACTGCACACTCACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTAAGTCCCTAGCCAAATaGACAGCTTCACCTTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: TLYCTLTLGFSPTGTRQSKSLAK*TASPST Trigger: AGTAGAAGGTGAAGCTGTTCATTTGGCTAGGGACTT...ACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGTGAGTGTGCAGTACAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR GCA 90 bp | ACACTGTACTGCACACTCACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTAATTCTTTACACAGTTaGTGGGCCGCCAATAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: TLYCTLTLGFSPTGTRQSNSLHS*WAANSM Trigger: CATGCTATTGGCGGCCCAGCAACTGTGTAAAGAATT...ACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGTGAGTGTGCAGTACAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CCA 90 bp | CAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCTCTCCAAGATGAGGTCTaGTTAAATATTCTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QSVRWRRIFAVLFLPYSPLQDEV*LNILPL Trigger: CAGTGGCAGAATATTTAACCAGACCTCATCTTGGAG...AGGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CCA 90 bp | TGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCTAACCTTTTCTTTACACAGTTGCTaGGCCGCCAATAGCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CGGEGFLQSCSFPTLLTFSLHSC*AANSMF Trigger: GAACATGCTATTGGCGGCCCAGCAACTGTGTAAAGA...AAAGGTTAGGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR GCA 90 bp | TGCACACTCACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTATTGCTTTCATGTTCTTCCTAGCTaGCATCTCATTTCGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CTLTLGFSPTGTRQSYCFHVLPS*HLISSS Trigger: GGAGGACGAAATGAGATGGCAGCTAGGAAGAACATG...AAAGCAATAACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGTGAGTGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CCA 90 bp | ACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTATTGCTTTCTGAACAGATCCCAGTCTGTGCGGTaGAGAAGGATTTTTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLGFSPTGTRQSYCFLNRSQSVR*RRIFAV Trigger: GACTGCAAAAATCCTTCTCCACCGCACAGACTGGGA...TCTGTTCAGAAAGCAATAACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR TCA 90 bp | CTTCTGATAATAGGTCCAAAGTTAGGAGATAGCTCAGCGCTAGAGAAACAACTATGGGACCTTTGCGAATaGCTGTCTGATCGTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLIIGPKLGDSSALEKQLWDLCE*LSDRAA Trigger: TGCTGCACGATCAGACAGTCATTCGCAAAGGTCCCA...TAGTTGTTTCTCTAGCGCTGAGCTATCTCCTAACTTTGGACCTATTATCAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR TCA 90 bp | TGCACACTCACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTATTGCTTTGTAATCAGGCTGAAATaGGACAAGCAGTTCTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: CTLTLGFSPTGTRQSYCFVIRLK*DKQFCM Trigger: CATACAGAACTGCTTGTCTCATTTCAGCCTGATTAC...AAAGCAATAACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGTGAGTGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR GCA 90 bp | ACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTATTGCTTTCTGAACAGAGTGGAGAAGGATTTTTaGAGTCCTGTTCCTTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: TLGFSPTGTRQSYCFLNRVEKDF*SPVPSL Trigger: TAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCAC...TCTGTTCAGAAAGCAATAACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CCA 90 bp | CTTCTGATAATAGGTCCAAAGTTAGGAGATAGCTCAGCGCTAGAGAAACAACTATTATTTTCCACAACATaGCGTCCGGCGTCCCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLIIGPKLGDSSALEKQLLFSTT*RPASPK Trigger: TTTGGGGGACGCCGGACGCCATGTTGTGGAAAATAA...TAGTTGTTTCTCTAGCGCTGAGCTATCTCCTAACTTTGGACCTATTATCAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CCA 90 bp | CTTCTGATAATAGGTCCAAAGTTAGGAGATAGCTCAGCGCTAGAGAAACAACTAGGTTCAGAGGGTTCTTaGTCATGGAAATGGGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLIIGPKLGDSSALEKQLGSEGS*SWKWDL Trigger: AAGGTCCCATTTCCATGACCAAGAACCCTCTGAACC...TAGTTGTTTCTCTAGCGCTGAGCTATCTCCTAACTTTGGACCTATTATCAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CCA 90 bp | TGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCTAACCTTTCACACAACAATTATTTaGGGAACATTTACAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CGGEGFLQSCSFPTLLTFHTTII*GTFTGR Trigger: TCTGCCTGTAAATGTTCCCCAAATAATTGTTGTGTG...AAAGGTTAGGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR TCA 90 bp | ACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTATTGCTTTCTGAACAGAGTATTGTTGATCTGTTaGTCTAGGGCACATCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: TLGFSPTGTRQSYCFLNRVLLIC*SRAHQF Trigger: AAATTGATGTGCCCTAGATCAACAGATCAACAATAC...TCTGTTCAGAAAGCAATAACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR TCA 90 bp | CTTCTGATAATAGGTCCAAAGTTAGGAGATAGCTCAGCGCTAGAGAAACAACTAAGTCCTCTTCGTACTTaGCATTATCGGTTATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLIIGPKLGDSSALEKQLSPLRT*HYRLFS Trigger: GGAAAATAACCGATAATGTCAAGTACGAAGAGGACT...TAGTTGTTTCTCTAGCGCTGAGCTATCTCCTAACTTTGGACCTATTATCAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR TCA 90 bp | CTTCTGATAATAGGTCCAAAGTTAGGAGATAGCTCAGCGCTAGAGAAACAACTATTTCGTCCTCCAAGATaGGGTCTGGTTAAATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLIIGPKLGDSSALEKQLFRPPR*GLVKYS Trigger: AGAATATTTAACCAGACCTCATCTTGGAGGACGAAA...TAGTTGTTTCTCTAGCGCTGAGCTATCTCCTAACTTTGGACCTATTATCAGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR GCA 90 bp | CTTCTGATAATAGGTCCAAAGTTAGGAGATAGCTCAGCGCTAGAGAAACAACTAAAAAGTCGTAAGAAGTaGACCAGTATTTACAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: LLIIGPKLGDSSALEKQLKSRKK*TSIYRP Trigger: GGGTCTGTAAATACTGGTGCACTTCTTACGACTTTT...TAGTTGTTTCTCTAGCGCTGAGCTATCTCCTAACTTTGGACCTATTATCAGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS GCA 90 bp | CGGCCGGGCCAGGCCTGCTGCTGGCTGCCTGTGGGCGCCGGCTGGTaGAGGGGGTTGATGGCGGCGGCGTACGCTTCCCCCAGATGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: RPGQACCWLPVGAGW*RGLMAAAYASPRCE Trigger: CTCGCATCTGGGGGAAGCGTACGCCGCCGCCATCAACCCCCTGCACCAGCCGGCGCCCACAGGCAGCCAGCAGCAGGCCTGGCCCGGCCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000201031.3 ENST00000416606.1 |
||
| CDS CCA 90 bp | TGGCGGCCGGGCCAGGCCTGCTGCTGGCTGCCTGTGGGCGCCGGCTaGTGCAGGGGGTTGATGGCGGCGGCGTACGCTTCCCCCAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: WRPGQACCWLPVGAG*CRGLMAAAYASPRC Trigger: GCATCTGGGGGAAGCGTACGCCGCCGCCATCAACCCCCTGCACCAGCCGGCGCCCACAGGCAGCCAGCAGCAGGCCTGGCCCGGCCGCCA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000201031.3 ENST00000416606.1 |
||
| CDS GCA 90 bp | GTGGAGCCCCAGGTTCTCGGCCAGGCCCGCGGCATCCAGGGCGTGTaGGTGGGGCAGCAGCAGGTCGGAGCGGCGGTAGGCATCCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: VEPQVLGQARGIQGV*VGQQQVGAAVGIPA Trigger: CGCAGGGATGCCTACCGCCGCTCCGACCTGCTGCTGCCCCACGCACACGCCCTGGATGCCGCGGGCCTGGCCGAGAACCTGGGGCTCCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS GCA 90 bp | GCGCGGGCCTTGCTGTCCGGGTCACTGGACACGCATCGGCGGCTCTaGGAGCGTAGATGCTGCCGCCGCGAGTGTCAAGACCGCTCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: ARALLSGSLDTHRRL*ERRCCRRECQDRSA Trigger: CGCGGAGCGGTCTTGACACTCGCGGCGGCAGCATCTACGCTCGCAGAGCCGCCGATGCGTGTCCAGTGACCCGGACAGCAAGGCCCGCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS GCA 90 bp | TCCGGGTCACTGGACACGCATCGGCGGCTCTGCGAGCGTAGATGCTaGCGCCGCGAGTGTCAAGACCGCTCCGCGGACGGGGAAAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SGSLDTHRRLCERRC*RRECQDRSADGESR Trigger: GCGGCTTTCCCCGTCCGCGGAGCGGTCTTGACACTCGCGGCGGCAGCATCTACGCTCGCAGAGCCGCCGATGCGTGTCCAGTGACCCGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS GCA 90 bp | CTGTCCGGGTCACTGGACACGCATCGGCGGCTCTGCGAGCGTAGATaGTGCCGCCGCGAGTGTCAAGACCGCTCCGCGGACGGGGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSGSLDTHRRLCERR*CRRECQDRSADGES Trigger: GCTTTCCCCGTCCGCGGAGCGGTCTTGACACTCGCGGCGGCAGCATCTACGCTCGCAGAGCCGCCGATGCGTGTCCAGTGACCCGGACAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS CCA 90 bp | CGACTGGGAGTAGGCCAGCTGCTGGTAGGGAGGGGGAAAGTAGGGTaGCGGCTGATATTCGGCGACTCCAGTGTGGGAGAGGGGTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RLGVGQLLVGRGKVG*RLIFGDSSVGEGWR Trigger: GCGCCACCCCTCTCCCACACTGGAGTCGCCGAATATCAGCCGCCACCCTACTTTCCCCCTCCCTACCAGCAGCTGGCCTACTCCCAGTCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000201031.3 ENST00000416606.1 |
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| CDS-3UTR CAA 90 bp | CCAGGAGGGGTTCCCAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCGGCTGGTGCAGGGGGTaGATGGCGGCGGCGTACGCT | + |
|
Preference number: 5 (lower is better) Translates to: PGGVPSLCGGEGFLQSCSGWCRG*MAAAYA Trigger: AGCGTACGCCGCCGCCATCAACCCCCTGCACCAGCC...GGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTGGGAACCCCTCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS CCA 90 bp | CAGGCTGAAATGAGACAAGCAGTTCTGTATGTTCGTCTCCAAGACTaGGGCGAGCCTGCTGGTCCCATGGGGTGTCCGGTCTTGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QAEMRQAVLYVRLQD*GEPAGPMGCPVLAE Trigger: CTCAGCCAAGACCGGACACCCCATGGGACCAGCAGGCTCGCCCCAGTCTTGGAGACGAACATACAGAACTGCTTGTCTCATTTCAGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGGGGTTCCCAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCCCAGAAGGCCCCCGTTaGAACACGGGGTTTAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PGGVPSLCGGEGFLQSCSPEGPR*NTGFRV Trigger: CACTCTAAACCCCGTGTTCAAACGGGGGCCTTCTGG...GGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTGGGAACCCCTCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CAA 90 bp | CCAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCAACCTCCACGGGGACTaGGGGGTGACAAGCAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PVCAVEKDFCSPVPSLLSNLHGD*GVTSSN Trigger: GTTGCTGCTTGTCACCCCCAAGTCCCCGTGGAGGTT...GGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CAA 90 bp | ACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTATTGCTTTCTGAACAGAACCCGCGGATTCCCATaGCTGCTCCCGTCGTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: TLGFSPTGTRQSYCFLNRTRGFP*LLPSWR Trigger: TCGCCACGACGGGAGCAGCAATGGGAATCCGCGGGT...TCTGTTCAGAAAGCAATAACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CAA 90 bp | CCAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCAGGTTCAGAGGGTTCTaGGTCATGGAAATGGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: PVCAVEKDFCSPVPSLLSRFRGF*VMEMGP Trigger: AGGTCCCATTTCCATGACCAAGAACCCTCTGAACCT...GGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CAA 90 bp | GTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCTAACCTTATGGGGTGTCCGGTCTaGGCTGAGAAGTTCTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VRWRRIFAVLFLPYSPNLMGCPV*AEKFCE Trigger: TTCACAGAACTTCTCAGCCAAGACCGGACACCCCAT...AAGGTTAGGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CAA 90 bp | CCAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCAAGCAGATAGAACCTTaGCCTCCTACCAGAGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: PVCAVEKDFCSPVPSLLSKQIEP*PPTRGL Trigger: AAGTCCTCTGGTAGGAGGCAAAGGTTCTATCTGCTT...GGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGGGGTTCCCAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCACACACAACAATTATTaGGGGAACATTTACAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGGVPSLCGGEGFLQSCSTHNNY*GNIYRQ Trigger: CTGCCTGTAAATGTTCCCCAAATAATTGTTGTGTGT...GGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTGGGAACCCCTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CAA 90 bp | TGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCTAACCTTTGGTGGAGAAGGATTTTaGCAGTCCTGTTCCTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: CGGEGFLQSCSFPTLLTFGGEGF*QSCSFP Trigger: AGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACC...AAAGGTTAGGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CAA 90 bp | GTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCTAACCTTAAGTGTGTGGGTCTGTaGGCCCAGGGAATGTATTTA | + |
|
Preference number: 5 (lower is better) Translates to: VRWRRIFAVLFLPYSPNLKCVGL*AQGMYL Trigger: TAAATACATTCCCTGGGCCAACAGACCCACACACTT...AAGGTTAGGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CAA 90 bp | CCAGTCTGTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCCAGTCCTCTTCGTACTaGACATTATCGGTTATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PVCAVEKDFCSPVPSLLSQSSSY*TLSVIF Trigger: GAAAATAACCGATAATGTCAAGTACGAAGAGGACTG...GGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCACAGACTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CAA 90 bp | TGCACACTCACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTATTGCTTTTCAGCCACTGTCACTTaGTATTTAGACGTAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CTLTLGFSPTGTRQSYCFSATVT*YLDVEL Trigger: CAGCTCTACGTCTAAATACAAAGTGACAGTGGCTGA...AAAGCAATAACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGTGAGTGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CAA 90 bp | GTGCGGTGGAGAAGGATTTTTGCAGTCCTGTTCCTTCCCTACTCTCCTAACCTTATAAAGAGCCAGTACTaGTCACCTTCTGATAATAGG | + |
|
Preference number: 5 (lower is better) Translates to: VRWRRIFAVLFLPYSPNLIKSQY*SPSDNR Trigger: CCTATTATCAGAAGGTGACAAGTACTGGCTCTTTAT...AAGGTTAGGAGAGTAGGGAAGGAACAGGACTGCAAAAATCCTTCTCCACCGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CAA 90 bp | TGCACACTCACCTTAGGGTTCAGCCCAACAGGAACGAGACAAAGTTATTGCTTTCTAGGGCACATCAATTaGACATTTCAATGGCTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CTLTLGFSPTGTRQSYCFLGHIN*TFQWLS Trigger: ACTTAGCCATTGAAATGTCAAATTGATGTGCCCTAG...AAAGCAATAACTTTGTCTCGTTCCTGTTGGGCTGAACCCTAAGGTGAGTGTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS CCA 90 bp | TTTCCTGTGTTTCTCCATTTTCTCCAGGGTTTTGTTAGAATCAGCTaGACTCTGGTCTCCAGGGTTCATGTAGGATTTGTCTATGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: FPVFLHFLQGFVRIS*TLVSRVHVGFVYDN Trigger: ATTGTCATAGACAAATCCTACATGAACCCTGGAGACCAGAGTCCAGCTGATTCTAACAAAACCCTGGAGAAAATGGAGAAACACAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CAA 90 bp | CTTCTGATAATAGGTCCAAAGTTAGGAGATAGCTCAGCGCTAGAGAAACAACTACCTCCATTTTTCGATTaGGCTCTTCTGAGAACACCT | + |
|
Preference number: 5 (lower is better) Translates to: LLIIGPKLGDSSALEKQLPPFFD*ALLRTP Trigger: AGGTGTTCTCAGAAGAGCCAAATCGAAAAATGGAGG...TAGTTGTTTCTCTAGCGCTGAGCTATCTCCTAACTTTGGACCTATTATCAGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS-3UTR CAA 90 bp | CTTCTGATAATAGGTCCAAAGTTAGGAGATAGCTCAGCGCTAGAGAAACAACTAATTTTCTCCAGGGTTTaGTTAGAATCAGCTGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: LLIIGPKLGDSSALEKQLIFSRV*LESAGL Trigger: GAGTCCAGCTGATTCTAACAAAACCCTGGAGAAAAT...TAGTTGTTTCTCTAGCGCTGAGCTATCTCCTAACTTTGGACCTATTATCAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000201031.3 |
||
| CDS GCA 72 bp | CAGGCCTGCTGCTGGCTGCCTGTGGGCGCCGGCTGGTaGAGGGGGTTGATGGCGGCGGCGTACGCTTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: QACCWLPVGAGW*RGLMAAAYASP Trigger: GGGGGAAGCGTACGCCGCCGCCATCAACCCCCTGCACCAGCCGGCGCCCACAGGCAGCCAGCAGCAGGCCTG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000201031.3 ENST00000416606.1 |
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| CDS GCA 72 bp | CAGGTTCTCGGCCAGGCCCGCGGCATCCAGGGCGTGTaGGTGGGGCAGCAGCAGGTCGGAGCGGCGGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: QVLGQARGIQGV*VGQQQVGAAVG Trigger: GCCTACCGCCGCTCCGACCTGCTGCTGCCCCACGCACACGCCCTGGATGCCGCGGGCCTGGCCGAGAACCTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS CCA 72 bp | GGCCAGGCCTGCTGCTGGCTGCCTGTGGGCGCCGGCTaGTGCAGGGGGTTGATGGCGGCGGCGTACGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: GQACCWLPVGAG*CRGLMAAAYAS Trigger: GGAAGCGTACGCCGCCGCCATCAACCCCCTGCACCAGCCGGCGCCCACAGGCAGCCAGCAGCAGGCCTGGCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000201031.3 ENST00000416606.1 |
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| CDS CCA 72 bp | GCCCCCGCCGCGCGCGGGCCTTGCTGTCCGGGTCACTaGACACGCATCGGCGGCTCTGCGAGCGTAGATGCT | + |
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Preference number: 6 (lower is better) Translates to: APAARGPCCPGH*TRIGGSASVDA Trigger: AGCATCTACGCTCGCAGAGCCGCCGATGCGTGTCCAGTGACCCGGACAGCAAGGCCCGCGCGCGGCGGGGGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS TCA 72 bp | GCTGGCTGCCTGTGGGCGCCGGCTGGTGCAGGGGGTTaGTGGCGGCGGCGTACGCTTCCCCCAGATGCGAGT | + |
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Preference number: 6 (lower is better) Translates to: AGCLWAPAGAGG*WRRRTLPPDAS Trigger: ACTCGCATCTGGGGGAAGCGTACGCCGCCGCCATCAACCCCCTGCACCAGCCGGCGCCCACAGGCAGCCAGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000201031.3 ENST00000416606.1 |
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| CDS GCA 72 bp | CTGGACACGCATCGGCGGCTCTGCGAGCGTAGATGCTaGCGCCGCGAGTGTCAAGACCGCTCCGCGGACGGG | + |
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Preference number: 6 (lower is better) Translates to: LDTHRRLCERRC*RRECQDRSADG Trigger: CCCGTCCGCGGAGCGGTCTTGACACTCGCGGCGGCAGCATCTACGCTCGCAGAGCCGCCGATGCGTGTCCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS CCA 72 bp | CGGCTGATATTCGGCGACTCCAGTGTGGGAGAGGGGTaGCGCGGGGCTGTAGAGGTGCTGCCCGGCGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: RLIFGDSSVGEG*RGAVEVLPGGG Trigger: TCCTCCGCCGGGCAGCACCTCTACAGCCCCGCGCCACCCCTCTCCCACACTGGAGTCGCCGAATATCAGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000201031.3 ENST00000416606.1 |
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| CDS CAA 72 bp | CCGGCGGAGGAGAGGTGGGGGACCCGCGGATTCCCATaGCTGCTCCCGTCGTGGCGATCCTCGCAGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: PAEERWGTRGFP*LLPSWRSSQSS Trigger: AGAGGACTGCGAGGATCGCCACGACGGGAGCAGCAATGGGAATCCGCGGGTCCCCCACCTCTCCTCCGCCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS GCA 72 bp | TCACTGGACACGCATCGGCGGCTCTGCGAGCGTAGATaGTGCCGCCGCGAGTGTCAAGACCGCTCCGCGGAC | + |
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Preference number: 6 (lower is better) Translates to: SLDTHRRLCERR*CRRECQDRSAD Trigger: GTCCGCGGAGCGGTCTTGACACTCGCGGCGGCAGCATCTACGCTCGCAGAGCCGCCGATGCGTGTCCAGTGA 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS GCA 72 bp | CGGCGGAGGAGAGGTGGGGGACCCGCGGATTCCCATTaGTGCTCCCGTCGTGGCGATCCTCGCAGTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: RRRRGGGPADSH*CSRRGDPRSPL Trigger: AAGAGGACTGCGAGGATCGCCACGACGGGAGCAGCAATGGGAATCCGCGGGTCCCCCACCTCTCCTCCGCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS GCA 72 bp | CGGAGGAGAGGTGGGGGACCCGCGGATTCCCATTGCTaGTCCCGTCGTGGCGATCCTGGAGGAACATGGCGC | + |
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Preference number: 6 (lower is better) Translates to: RRRGGGPADSHC*SRRGDPGGTWR Trigger: GCGCCATGTTCCTCCAGGATCGCCACGACGGGAGCAGCAATGGGAATCCGCGGGTCCCCCACCTCTCCTCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000416606.1 |
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| CDS GCA 72 bp | CGGCGGAGGAGAGGTGGGGGACCCGCGGATTCCCATTaGTGCTCCCGTCGTGGCGATCCTGGAGGAACATGG | + |
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Preference number: 6 (lower is better) Translates to: RRRRGGGPADSH*CSRRGDPGGTW Trigger: CCATGTTCCTCCAGGATCGCCACGACGGGAGCAGCAATGGGAATCCGCGGGTCCCCCACCTCTCCTCCGCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000416606.1 |
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| CDS CAA 72 bp | CCGGCGGAGGAGAGGTGGGGGACCCGCGGATTCCCATaGCTGCTCCCGTCGTGGCGATCCTGGAGGAACATG | + |
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Preference number: 6 (lower is better) Translates to: PAEERWGTRGFP*LLPSWRSWRNM Trigger: CATGTTCCTCCAGGATCGCCACGACGGGAGCAGCAATGGGAATCCGCGGGTCCCCCACCTCTCCTCCGCCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000416606.1 |
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| CDS CAA 90 bp | AGGTGCTGCCCGGCGGAGGAGAGGTGGGGGACCCGCGGATTCCCATaGCTGCTCCCGTCGTGGCGATCCTCGCAGTCCTCTTCGTACTTG | + |
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Preference number: 6 (lower is better) Translates to: RCCPAEERWGTRGFP*LLPSWRSSQSSSYL Trigger: CAAGTACGAAGAGGACTGCGAGGATCGCCACGACGGGAGCAGCAATGGGAATCCGCGGGTCCCCCACCTCTCCTCCGCCGGGCAGCACCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS GCA 72 bp | CGGAGGAGAGGTGGGGGACCCGCGGATTCCCATTGCTaGTCCCGTCGTGGCGATCCTCGCAGTCCTCTTCGT | + |
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Preference number: 6 (lower is better) Translates to: RRRGGGPADSHC*SRRGDPRSPLR Trigger: ACGAAGAGGACTGCGAGGATCGCCACGACGGGAGCAGCAATGGGAATCCGCGGGTCCCCCACCTCTCCTCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS GCA 72 bp | TTGCTGTCCGGGTCACTGGACACGCATCGGCGGCTCTaGGAGCGTAGATGCTGCCGCCGCGAGTGTCAAGAC | + |
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Preference number: 6 (lower is better) Translates to: LLSGSLDTHRRL*ERRCCRRECQD Trigger: GTCTTGACACTCGCGGCGGCAGCATCTACGCTCGCAGAGCCGCCGATGCGTGTCCAGTGACCCGGACAGCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS CCA 72 bp | GTAGGCCAGCTGCTGGTAGGGAGGGGGAAAGTAGGGTaGCGGCTGATATTCGGCGACTCCAGTGTGGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: VGQLLVGRGKVG*RLIFGDSSVGE Trigger: CTCTCCCACACTGGAGTCGCCGAATATCAGCCGCCACCCTACTTTCCCCCTCCCTACCAGCAGCTGGCCTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000201031.3 ENST00000416606.1 |
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| CDS CCA 72 bp | TTCGTCTCCAAGACTGGGGCGAGCCTGCTGGTCCCATaGGGTGTCCGGTCTTGGCTGAGAAGTTCTGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: FVSKTGASLLVP*GVRSWLRSSVN Trigger: ATTCACAGAACTTCTCAGCCAAGACCGGACACCCCATGGGACCAGCAGGCTCGCCCCAGTCTTGGAGACGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS CCA 72 bp | ATGAGACAAGCAGTTCTGTATGTTCGTCTCCAAGACTaGGGCGAGCCTGCTGGTCCCATGGGGTGTCCGGTC | + |
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Preference number: 6 (lower is better) Translates to: MRQAVLYVRLQD*GEPAGPMGCPV Trigger: GACCGGACACCCCATGGGACCAGCAGGCTCGCCCCAGTCTTGGAGACGAACATACAGAACTGCTTGTCTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS TCA 72 bp | GCTTCACCTTCTACTAAGGATGTCAGGAGAGTCACATaGGCGGCTTTCCGCCTCCCGGCCGGAAGATTCAAC | + |
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Preference number: 6 (lower is better) Translates to: ASPSTKDVRRVT*AAFRLPAGRFN Trigger: GTTGAATCTTCCGGCCGGGAGGCGGAAAGCCGCTCATGTGACTCTCCTGACATCCTTAGTAGAAGGTGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS CAA 72 bp | CTCCCGTCGTGGCGATCCTCGCAGTCCTCTTCGTACTaGACATTATCGGTTATTTTCCACAACATGGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: LPSWRSSQSSSY*TLSVIFHNMAS Trigger: GGACGCCATGTTGTGGAAAATAACCGATAATGTCAAGTACGAAGAGGACTGCGAGGATCGCCACGACGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS TCA 72 bp | GCCTGGCTGCCAAACCCGTGGGTAATCAGGCTGAAATaGGACAAGCAGTTCTGTATGTTCGTCTCCAAGACT | + |
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Preference number: 6 (lower is better) Translates to: AWLPNPWVIRLK*DKQFCMFVSKT Trigger: AGTCTTGGAGACGAACATACAGAACTGCTTGTCTCATTTCAGCCTGATTACCCACGGGTTTGGCAGCCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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| CDS TCA 72 bp | TTCTTCCTAGCTGCCATCTCATTTCGTCCTCCAAGATaGGGTCTGGTTAAATATTCTGCCACTGGTTTACTA | + |
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Preference number: 6 (lower is better) Translates to: FFLAAISFRPPR*GLVKYSATGLL Trigger: TAGTAAACCAGTGGCAGAATATTTAACCAGACCTCATCTTGGAGGACGAAATGAGATGGCAGCTAGGAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000201031.3 |
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