Pregenerated sensors for TEX51 (Homo sapiens)
Ensembl gene IDs: ENSG00000237524Ensembl transcript IDs: ENST00000436605.4, ENST00000437793.1, ENST00000441412.3, ENST00000450035.5, ENST00000454927.7, ENST00000458326.5, ENST00000568484.6, ENST00000636439.1, ENST00000636457.1, ENST00000637962.1, ENST00000643416.1
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CAAACCACGAGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGATGGAGGGTATaGGGGGATGGGGTCACCGGG | + |
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Preference number: 2 (lower is better) Translates to: QTTRQRSLLGLRALGPQDPGWRV*GDGVTG Trigger: CCCGGTGACCCCATCCCCCCATACCCTCCATCCTGG...GTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCTCGTGGTTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636439.1 ENST00000636457.1 |
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| 3UTR-3UTR CCA 90 bp | TCACTTCTGGAAGACATGCGGGCTGCCCTGTTCCTGCTTTACTGCCTCCTTCTTAAACATCTCCAGCTATaGCCAGGAGTAGAGCACTGC | + |
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Preference number: 2 (lower is better) Translates to: SLLEDMRAALFLLYCLLLKHLQL*PGVEHC Trigger: GCAGTGCTCTACTCCTGGCCATAGCTGGAGATGTTT...AAGAAGGAGGCAGTAAAGCAGGAACAGGGCAGCCCGCATGTCTTCCAGAAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458326.5 |
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| 3UTR-3UTR CAA 90 bp | AACCACGAGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCCTAGGCCTCAGAGCTTaGGGGCCCCAGGACCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: NHETAQSPRPQSFGAPGPLGLRA*GPQDPG Trigger: TCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAG...GGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCTCGTGGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 6 transcripts: ENST00000441412.3 ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636439.1 ENST00000636457.1 |
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| 3UTR-3UTR CAA 90 bp | ACCACGAGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCACTAGGCCTCAGAGCTTaGGGGCCCCAGGACCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: TTRQRSLLGLRALGPQDPLGLRA*GPQDPG Trigger: TCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAG...TGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCTCGTGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENST00000441412.3 ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636439.1 ENST00000636457.1 |
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| 3UTR-3UTR CAA 90 bp | CAAACCACGAGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCTAGGCCTCAGAGCTTaGGGGCCCCAGGACCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: QTTRQRSLLGLRALGPQDLGLRA*GPQDPG Trigger: TCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAG...GTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCTCGTGGTTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENST00000441412.3 ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636439.1 ENST00000636457.1 |
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| 3UTR TCA 72 bp | AAACATCTCCAGCTATGGCCAGGAGTAGAGCACTGCTaGGACTCACAGCCCACAGGGAGGTCCGCCGGTTCC | + |
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Preference number: 3 (lower is better) Translates to: KHLQLWPGVEHC*DSQPTGRSAGS Trigger: GGAACCGGCGGACCTCCCTGTGGGCTGTGAGTCTCAGCAGTGCTCTACTCCTGGCCATAGCTGGAGATGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458326.5 |
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| 3UTR CCA 72 bp | TTTGTGACGGTGGTAGCTGCGGCCTCTGTTCACTTCTaGAAGACATGCGGGCTGCCCTGTTCCTGCTTTACT | + |
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Preference number: 3 (lower is better) Translates to: FVTVVAAASVHF*KTCGLPCSCFT Trigger: AGTAAAGCAGGAACAGGGCAGCCCGCATGTCTTCCAGAAGTGAACAGAGGCCGCAGCTACCACCGTCACAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458326.5 |
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| 3UTR-3UTR CAA 90 bp | AATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCACGAGACAGCGCACTAGGCCTCAGAGCTTaGGGGCCCCAGGACCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: NEETLYKGVGVGKPRDSALGLRA*GPQDPG Trigger: TCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAG...TGCGCTGTCTCGTGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000441412.3 ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636439.1 ENST00000636457.1 |
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| CDS-3UTR CCA 90 bp | CACGAGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGCCAGGATGGAGGGTATaGGGGGATGGGGTCACCGGG | + |
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Preference number: 4 (lower is better) Translates to: HETAQSPRPQSFGAPGPRPGWRV*GDGVTG Trigger: CCCGGTGACCCCATCCCCCCATACCCTCCATCCTGG...CCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCTCGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENST00000441412.3 ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636439.1 ENST00000636457.1 |
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| CDS-3UTR CCA 90 bp | ACCACGAGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAAGGTCCGCCGGTTCCTaGCTGGGCAGAAAGTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TTRQRSLLGLRALGPQDPRSAGS*LGRKWG Trigger: ACCCCACTTTCTGCCCAGCCAGGAACCGGCGGACCT...TGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCTCGTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR CCA 90 bp | CGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGATGGAGGGTAAGGTCCGCCGGTTCCTaGCCTTCTCCTTCAGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: RSLLGLRALGPQDPGWRVRSAGS*PSPSAH Trigger: ATGGGCTGAAGGAGAAGGCCAGGAACCGGCGGACCT...TACCCTCCATCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441412.3 |
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| CDS-3UTR CCA 90 bp | CACGAGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGCAAGGCAGACAGTTCTaGCCAGCAGCGGAGGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: HETAQSPRPQSFGAPGPRQGRQF*PAAEAV Trigger: AACTGCCTCCGCTGCTGGCCAGAACTGTCTGCCTTG...CCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCTCGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR CCA 90 bp | ACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGATGGAGCCGCCGGTTCCTGGCTaGGCAGAAAGTGGGGTCATT | + |
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Preference number: 4 (lower is better) Translates to: TAQSPRPQSFGAPGPRMEPPVPG*AESGVI Trigger: AATGACCCCACTTTCTGCCCAGCCAGGAACCGGCGG...CTCCATCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR CCA 90 bp | CGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGATGGAGGGTACCGCCGGTTCCTGGCTaGGCAGAAAGTGGGGTCATT | + |
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Preference number: 4 (lower is better) Translates to: RSLLGLRALGPQDPGWRVPPVPG*AESGVI Trigger: AATGACCCCACTTTCTGCCCAGCCAGGAACCGGCGG...TACCCTCCATCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR GCA 90 bp | CACGAGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGTGTGACGGTGGTAGCTaGGGCCTCTGTTCACTTCTG | + |
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Preference number: 4 (lower is better) Translates to: HETAQSPRPQSFGAPGPRCDGGS*GLCSLL Trigger: CAGAAGTGAACAGAGGCCGCAGCTACCACCGTCACA...CCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCTCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000441412.3 ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636439.1 ENST00000636457.1 |
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| CDS-3UTR CCA 90 bp | GAGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGATGTGCCACCTCCAGCTATaGCCAGGAGTAGAGCACTGC | + |
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Preference number: 4 (lower is better) Translates to: ETAQSPRPQSFGAPGPRMCHLQL*PGVEHC Trigger: GCAGTGCTCTACTCCTGGCCATAGCTGGAGGTGGCA...CATCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441412.3 |
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| CDS-3UTR CCA 90 bp | AGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGATGGAGAAAGTTCTGTGGGTaGCCCTGGGGTCACCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: RQRSLLGLRALGPQDPGWRKFCG*PWGHPE Trigger: CTCTGGGTGACCCCAGGGCCACCCACAGAACTTTCT...CCATCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR GCA 90 bp | GAGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGATGTGTGACGGTGGTAGCTaGGGCCTCTGTTCACTTCTG | + |
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Preference number: 4 (lower is better) Translates to: ETAQSPRPQSFGAPGPRMCDGGS*GLCSLL Trigger: CAGAAGTGAACAGAGGCCGCAGCTACCACCGTCACA...CATCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000441412.3 ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636439.1 ENST00000636457.1 |
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| CDS-3UTR GCA 90 bp | AACCACGAGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCGGAAGACATGCGGGCTaGCCTGTTCCTTTACTGCCT | + |
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Preference number: 4 (lower is better) Translates to: NHETAQSPRPQSFGAPGPGRHAG*PVPLLP Trigger: AGGCAGTAAAGGAACAGGGCAGCCCGCATGTCTTCC...GGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCTCGTGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568484.6 |
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| CDS-3UTR CCA 90 bp | AGGCAAACCACGAGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGCAAGGCAGACAGTTCTaGCCAGCAGCGGAGGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: RQTTRQRSLLGLRALGPQQGRQF*PAAEAV Trigger: AACTGCCTCCGCTGCTGGCCAGAACTGTCTGCCTTG...CTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCTCGTGGTTTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR CCA 90 bp | ACCACGAGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAAGAGGCAGCATCTTCTaGGTTCCTCCTACTGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: TTRQRSLLGLRALGPQDPRGSIF*VPPTVP Trigger: GGGCACAGTAGGAGGAACCCAGAAGATGCTGCCTCT...TGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCTCGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568484.6 |
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| CDS-3UTR GCA 90 bp | CAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGATGGAGGAGAAAGTGGGGTCATTaGAGGAGAGGAAGTGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: QRSLLGLRALGPQDPGWRRKWGH*RRGSES Trigger: GGACTCACTTCCTCTCCTGCAATGACCCCACTTTCT...CCTCCATCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR GCA 90 bp | CAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGATGGAGGGTATGGGGCTGCCCTGTTCCTaGTTTACTGCCTCCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: QSPRPQSFGAPGPRMEGMGLPCS*FTASFF Trigger: GAAGAAGGAGGCAGTAAAGCAGGAACAGGGCAGCCC...CATACCCTCCATCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000636439.1 ENST00000636457.1 |
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| CDS-3UTR CCA 90 bp | CAAACCACGAGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACATCCACCTCCAGCTATaGCCAGGAGTAGAGCACTGC | + |
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Preference number: 4 (lower is better) Translates to: QTTRQRSLLGLRALGPQDIHLQL*PGVEHC Trigger: GCAGTGCTCTACTCCTGGCCATAGCTGGAGGTGGAT...GTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCTCGTGGTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000636439.1 ENST00000636457.1 |
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| CDS-3UTR TCA 90 bp | GGGGGATGGGGTCACCGGGACCCAGAGATGAGTGAACTTTGTGACGGTGGTAGCTTGCAGGAGAGGAAGTaGGTCCTGCAGTCAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: GGWGHRDPEMSELCDGGSLQERK*VLQSAQ Trigger: CTGTGCTGACTGCAGGACTCACTTCCTCTCCTGCAA...GCTACCACCGTCACAAAGTTCACTCATCTCTGGGTCCCGGTGACCCCATCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR CCA 90 bp | GGATGGGGTCACCGGGACCCAGAGATGAGTGAACTTTGTGACGGTGGTAGCTGCAGAAAGTTCTGTGGGTaGCCCTGGGGTCACCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: GWGHRDPEMSELCDGGSCRKFCG*PWGHPE Trigger: CTCTGGGTGACCCCAGGGCCACCCACAGAACTTTCT...GCAGCTACCACCGTCACAAAGTTCACTCATCTCTGGGTCCCGGTGACCCCATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR CCA 90 bp | AGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGATGGAAACATCTCCAGCTATaGCCAGGAGTAGAGCACTGC | + |
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Preference number: 4 (lower is better) Translates to: RQRSLLGLRALGPQDPGWKHLQL*PGVEHC Trigger: GCAGTGCTCTACTCCTGGCCATAGCTGGAGATGTTT...CCATCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 |
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| CDS-3UTR CCA 90 bp | CTCTGTTCACTTCTGGAAGACATGCGGGCTGCCCTGTTCCTGCTTTACTGCCTCAGGTCCGCCGGTTCCTaGCACAGGACTCATTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LCSLLEDMRAALFLLYCLRSAGS*HRTHCR Trigger: CCTGCAATGAGTCCTGTGCCAGGAACCGGCGGACCT...GAGGCAGTAAAGCAGGAACAGGGCAGCCCGCATGTCTTCCAGAAGTGAACAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458326.5 |
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| CDS-3UTR TCA 90 bp | GCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGATGGAGGGTATGGCTTGGTGTACTTaGGTGAAGAATTTGGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: AQSPRPQSFGAPGPRMEGMAWCT*VKNLAV Trigger: AACAGCCAAATTCTTCACTCAAGTACACCAAGCCAT...ACCCTCCATCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR TCA 90 bp | ACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGATGGAGAAATGGTCACGATTTTaGGAAAGTTCTGTGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: TAQSPRPQSFGAPGPRMEKWSRF*ESSVGG Trigger: GCCACCCACAGAACTTTCTCAAAATCGTGACCATTT...CTCCATCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 |
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| CDS-3UTR CCA 90 bp | CCTCTGTTCACTTCTGGAAGACATGCGGGCTGCCCTGTTCCTGCTTTACTGCCTAGAAAGTTCTGTGGGTaGCCCTGGGGTCACCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PLFTSGRHAGCPVPALLPRKFCG*PWGHPE Trigger: CTCTGGGTGACCCCAGGGCCACCCACAGAACTTTCT...AGGCAGTAAAGCAGGAACAGGGCAGCCCGCATGTCTTCCAGAAGTGAACAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458326.5 |
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| CDS-3UTR CCA 90 bp | CACGAGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGGTTTCTTCTTCCAAATaGTCACGATCAAGGTACCAG | + |
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Preference number: 4 (lower is better) Translates to: HETAQSPRPQSFGAPGPRVSSSK*SRSRYQ Trigger: CTGGTACCTTGATCGTGACCATTTGGAAGAAGAAAC...CCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCTCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636457.1 |
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| CDS-3UTR TCA 90 bp | CAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGATGGAGGCTTGGTGTACTTGAGTaGAGAATTTGGCTGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: QRSLLGLRALGPQDPGWRLGVLE*RIWLFL Trigger: AAGAAACAGCCAAATTCTTCACTCAAGTACACCAAG...CCTCCATCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR TCA 90 bp | ACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGATGGAGATGGCTTGGTGTACTTaGGTGAAGAATTTGGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: TAQSPRPQSFGAPGPRMEMAWCT*VKNLAV Trigger: AACAGCCAAATTCTTCACTCAAGTACACCAAGCCAT...CTCCATCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR TCA 90 bp | CAAACCACGAGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACAAATGGTCACGATTTTaGGAAAGTTCTGTGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: QTTRQRSLLGLRALGPQDKWSRF*ESSVGG Trigger: GCCACCCACAGAACTTTCTCAAAATCGTGACCATTT...GTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCTCGTGGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 |
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| CDS-3UTR TCA 90 bp | TCACTTCTGGAAGACATGCGGGCTGCCCTGTTCCTGCTTTACTGCCTCCTTCTTGGCTGCCAGGGAGGGTaGGAAGGTAGAGAAACTGAG | + |
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Preference number: 4 (lower is better) Translates to: SLLEDMRAALFLLYCLLLGCQGG*EGRETE Trigger: CTCAGTTTCTCTACCTTCTCACCCTCCCTGGCAGCC...AAGAAGGAGGCAGTAAAGCAGGAACAGGGCAGCCCGCATGTCTTCCAGAAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458326.5 |
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| CDS-3UTR TCA 90 bp | ACCACGAGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCACTTGGTGTACTTGAGTaGAGAATTTGGCTGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: TTRQRSLLGLRALGPQDPLGVLE*RIWLFL Trigger: AAGAAACAGCCAAATTCTTCACTCAAGTACACCAAG...TGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCTCGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR TCA 90 bp | AACCACGAGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCCTTGGTGTACTTGAGTaGAGAATTTGGCTGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: NHETAQSPRPQSFGAPGPLGVLE*RIWLFL Trigger: AAGAAACAGCCAAATTCTTCACTCAAGTACACCAAG...GGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCTCGTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR TCA 90 bp | CAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGATGGAGGGTATGATGGCTTGGTGTACTTaGGTGAAGAATTTGGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: QSPRPQSFGAPGPRMEGMMAWCT*VKNLAV Trigger: AACAGCCAAATTCTTCACTCAAGTACACCAAGCCAT...CATACCCTCCATCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR GCA 90 bp | TCACTTCTGGAAGACATGCGGGCTGCCCTGTTCCTGCTTTACTGCCTCCTTCTTGGGCTGCCCTGTTCCTaGTTTACTGCCTCCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SLLEDMRAALFLLYCLLLGLPCS*FTASFF Trigger: GAAGAAGGAGGCAGTAAAGCAGGAACAGGGCAGCCC...AAGAAGGAGGCAGTAAAGCAGGAACAGGGCAGCCCGCATGTCTTCCAGAAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458326.5 |
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| CDS-3UTR TCA 90 bp | AGGCAAACCACGAGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGCTTGGTGTACTTGAGTaGAGAATTTGGCTGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: RQTTRQRSLLGLRALGPQLGVLE*RIWLFL Trigger: AAGAAACAGCCAAATTCTTCACTCAAGTACACCAAG...CTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCTCGTGGTTTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR GCA 90 bp | TGTTCACTTCTGGAAGACATGCGGGCTGCCCTGTTCCTGCTTTACTGCCTCCTTGTAGAGAAACTGAGGTaGCTTCTCCTTCAGCCCATC | + |
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Preference number: 4 (lower is better) Translates to: CSLLEDMRAALFLLYCLLVEKLR*LLLQPI Trigger: GATGGGCTGAAGGAGAAGGCACCTCAGTTTCTCTAC...AAGGAGGCAGTAAAGCAGGAACAGGGCAGCCCGCATGTCTTCCAGAAGTGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458326.5 |
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| CDS-3UTR GCA 90 bp | TTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCACGAGACAGCGGGCTGCCCTGTTCCTaGTCCAGCTATGGCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FNEETLYKGVGVGKPRDSGLPCS*SSYGQE Trigger: CTCCTGGCCATAGCTGGAGCAGGAACAGGGCAGCCC...GCTGTCTCGTGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436605.4 |
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| CDS-3UTR CCA 90 bp | AAGAGGGGTTTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCACCAGGATGGAGGGTATaGGGGGATGGGGTCACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KRGFNEETLYKGVGVGKPPGWRV*GDGVTG Trigger: CCCGGTGACCCCATCCCCCCATACCCTCCATCCTGG...TGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAAACCCCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 7 transcripts: ENST00000436605.4 ENST00000441412.3 ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636439.1 ENST00000636457.1 |
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| CDS-3UTR CCA 90 bp | AATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCACGAGACAGCGCACAAGGCAGACAGTTCTaGCCAGCAGCGGAGGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NEETLYKGVGVGKPRDSAQGRQF*PAAEAV Trigger: AACTGCCTCCGCTGCTGGCCAGAACTGTCTGCCTTG...TGCGCTGTCTCGTGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR CCA 90 bp | GCTATGAAGAGGGGTTTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAGGTCCGCCGGTTCCTaGCTGGGCAGAAAGTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AMKRGFNEETLYKGVGVGRSAGS*LGRKWG Trigger: ACCCCACTTTCTGCCCAGCCAGGAACCGGCGGACCT...GCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAAACCCCTCTTCATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR CCA 90 bp | GGTTTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCACGAGACAGGTCCGCCGGTTCCTaGCTGGGCAGAAAGTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GFNEETLYKGVGVGKPRDRSAGS*LGRKWG Trigger: ACCCCACTTTCTGCCCAGCCAGGAACCGGCGGACCT...GTCTCGTGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000568484.6 ENST00000636457.1 |
||
| CDS-3UTR GCA 90 bp | AATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCACGAGACAGCGCAGGGCTGCCCTGTTCCTaGTTTACTGCCTCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NEETLYKGVGVGKPRDSAGLPCS*FTASFF Trigger: GAAGAAGGAGGCAGTAAAGCAGGAACAGGGCAGCCC...TGCGCTGTCTCGTGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000636439.1 ENST00000636457.1 |
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| CDS-3UTR CCA 90 bp | AGGGGTTTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCACGAAGGTCCGCCGGTTCCTaGCACAGGACTCATTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGFNEETLYKGVGVGKPRRSAGS*HRTHCR Trigger: CCTGCAATGAGTCCTGTGCCAGGAACCGGCGGACCT...TCGTGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAAACCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000436605.4 ENST00000458326.5 |
||
| CDS-3UTR GCA 90 bp | AAGAGGGGTTTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCAGGAAGACATGCGGGCTaGCCTGTTCCTGCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KRGFNEETLYKGVGVGKPGRHAG*PVPAPA Trigger: AGCTGGAGCAGGAACAGGGCAGCCCGCATGTCTTCC...TGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAAACCCCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436605.4 |
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| CDS-3UTR CCA 90 bp | AGGGGTTTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCACGACAAGGCAGACAGTTCTaGCCAGCAGCGGAGGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RGFNEETLYKGVGVGKPRQGRQF*PAAEAV Trigger: AACTGCCTCCGCTGCTGGCCAGAACTGTCTGCCTTG...TCGTGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAAACCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636457.1 |
||
| CDS-3UTR CCA 90 bp | TTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCACGAGACAGCAGAAAGTTCTGTGGGTaGCCCTGGGGTCACCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FNEETLYKGVGVGKPRDSRKFCG*PWGHPE Trigger: CTCTGGGTGACCCCAGGGCCACCCACAGAACTTTCT...GCTGTCTCGTGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR TCA 90 bp | TTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCACGAGACAGCTTGCAGGAGAGGAAGTaGGTCCTGCAGTCAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FNEETLYKGVGVGKPRDSLQERK*VLQSAQ Trigger: CTGTGCTGACTGCAGGACTCACTTCCTCTCCTGCAA...GCTGTCTCGTGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000568484.6 ENST00000636457.1 |
||
| CDS-3UTR TCA 90 bp | GCTATGAAGAGGGGTTTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCTTGCAGGAGAGGAAGTaGGTCCTGCAGTCAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: AMKRGFNEETLYKGVGVGLQERK*VLQSAQ Trigger: CTGTGCTGACTGCAGGACTCACTTCCTCTCCTGCAA...GCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAAACCCCTCTTCATAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR GCA 90 bp | TTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCACGAGACAGCTGTGACGGTGGTAGCTaGGGCCTCTGTTCACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FNEETLYKGVGVGKPRDSCDGGS*GLCSLL Trigger: CAGAAGTGAACAGAGGCCGCAGCTACCACCGTCACA...GCTGTCTCGTGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000436605.4 ENST00000441412.3 ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636439.1 ENST00000636457.1 |
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| CDS-3UTR CCA 90 bp | AATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCACGAGACAGCGCAAAACATCTCCAGCTATaGCCAGGAGTAGAGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: NEETLYKGVGVGKPRDSAKHLQL*PGVEHC Trigger: GCAGTGCTCTACTCCTGGCCATAGCTGGAGATGTTT...TGCGCTGTCTCGTGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 |
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| CDS-3UTR CCA 90 bp | AGGGGTTTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCACGAATCCACCTCCAGCTATaGCCAGGAGTAGAGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGFNEETLYKGVGVGKPRIHLQL*PGVEHC Trigger: GCAGTGCTCTACTCCTGGCCATAGCTGGAGGTGGAT...TCGTGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAAACCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000636439.1 ENST00000636457.1 |
||
| CDS-3UTR CCA 90 bp | AAGAGGGGTTTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCATTCCTGCTCCAGCTATaGCCAGGAGTAGAGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRGFNEETLYKGVGVGKPFLLQL*PGVEHC Trigger: GCAGTGCTCTACTCCTGGCCATAGCTGGAGCAGGAA...TGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAAACCCCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436605.4 |
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| CDS-3UTR GCA 90 bp | TTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCACGAGACAGCAGAAAGTGGGGTCATTaGAGGAGAGGAAGTGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FNEETLYKGVGVGKPRDSRKWGH*RRGSES Trigger: GGACTCACTTCCTCTCCTGCAATGACCCCACTTTCT...GCTGTCTCGTGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000568484.6 ENST00000636457.1 |
||
| CDS-3UTR GCA 90 bp | ATGAAGAGGGGTTTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAAGGGCTGCCCTGTTCCTaGTTTACTGCCTCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MKRGFNEETLYKGVGVGKGLPCS*FTASFF Trigger: GAAGAAGGAGGCAGTAAAGCAGGAACAGGGCAGCCC...TTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAAACCCCTCTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000636439.1 ENST00000636457.1 |
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| CDS-3UTR CCA 90 bp | GCTATGAAGAGGGGTTTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACATCTCCAGCTATaGCCAGGAGTAGAGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: AMKRGFNEETLYKGVGVGKHLQL*PGVEHC Trigger: GCAGTGCTCTACTCCTGGCCATAGCTGGAGATGTTT...GCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAAACCCCTCTTCATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 |
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| CDS-3UTR TCA 90 bp | AGGGGTTTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCACGAATGGCTTGGTGTACTTaGGTGAAGAATTTGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RGFNEETLYKGVGVGKPRMAWCT*VKNLAV Trigger: AACAGCCAAATTCTTCACTCAAGTACACCAAGCCAT...TCGTGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAAACCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000436605.4 ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR TCA 90 bp | TTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCACGAGACAGCATGGCTTGGTGTACTTaGGTGAAGAATTTGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FNEETLYKGVGVGKPRDSMAWCT*VKNLAV Trigger: AACAGCCAAATTCTTCACTCAAGTACACCAAGCCAT...GCTGTCTCGTGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000436605.4 ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR TCA 90 bp | AAGAGGGGTTTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCAAAATGGTCACGATTTTaGGAAAGTTCTGTGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRGFNEETLYKGVGVGKPKWSRF*ESSVGG Trigger: GCCACCCACAGAACTTTCTCAAAATCGTGACCATTT...TGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAAACCCCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 |
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| CDS-3UTR TCA 90 bp | AGGGGTTTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCACGACTTGGTGTACTTGAGTaGAGAATTTGGCTGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGFNEETLYKGVGVGKPRLGVLE*RIWLFL Trigger: AAGAAACAGCCAAATTCTTCACTCAAGTACACCAAG...TCGTGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAAACCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000436605.4 ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636457.1 |
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| CDS-3UTR TCA 90 bp | ATGAAGAGGGGTTTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACAAGGTACCAGGGTTTaGGAAAATTATTATCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: MKRGFNEETLYKGVGVGKQGTRV*ENYYPL Trigger: TAGAGGATAATAATTTTCTCAAACCCTGGTACCTTG...TTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAAACCCCTCTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000636457.1 |
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| CDS-3UTR CAA 90 bp | CGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGATGGAGGGTACTAGGCCTCAGAGCTTaGGGGCCCCAGGACCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RSLLGLRALGPQDPGWRVLGLRA*GPQDPG Trigger: TCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAG...TACCCTCCATCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENST00000441412.3 ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636439.1 ENST00000636457.1 |
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| CDS-3UTR CAA 90 bp | AGGCAAACCACGAGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGCTAGGCCTCAGAGCTTaGGGGCCCCAGGACCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RQTTRQRSLLGLRALGPQLGLRA*GPQDPG Trigger: TCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAG...CTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCTCGTGGTTTGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENST00000441412.3 ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636439.1 ENST00000636457.1 |
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| CDS CCA 90 bp | GATGATCGAGGGGGCTGCAGAGTGAAATCTGCATGCCTTGGGTCTTaGCAGGTGTGGAGGGCTGGGCCGTGTGCAGGGATCGTCCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: DDRGGCRVKSACLGS*QVWRAGPCAGIVPT Trigger: GGTGGGGACGATCCCTGCACACGGCCCAGCCCTCCACACCTGCCAAGACCCAAGGCATGCAGATTTCACTCTGCAGCCCCCTCGATCATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454927.7 |
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| CDS-3UTR CAA 90 bp | CAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGATGGAGGGTATGCTGGCACAGGACTCATaGCAGGCTGCCAGGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QSPRPQSFGAPGPRMEGMLAQDS*QAAREG Trigger: ACCCTCCCTGGCAGCCTGCAATGAGTCCTGTGCCAG...CATACCCTCCATCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458326.5 |
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| CDS TCA 90 bp | AAAAGAAACATCCACCTCCAGCTATGGCCAGGAGTAGAGCACTGCTaGGACTCACAGCCCACAGGGAGGTCCGCCGGTTCCTGGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KRNIHLQLWPGVEHC*DSQPTGRSAGSWLG Trigger: GCCCAGCCAGGAACCGGCGGACCTCCCTGTGGGCTGTGAGTCTCAGCAGTGCTCTACTCCTGGCCATAGCTGGAGGTGGATGTTTCTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000636439.1 ENST00000636457.1 ENST00000643416.1 |
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| CDS TCA 90 bp | AGCAGCGGAGGCAGTTCTTCCCTTCAATGGCAGGCAGGAGACAGATaGTCAGGAGAGGCAGCATCTTCTGGGTTCCTCCTACTGTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSGGSSSLQWQAGDR*SGEAASSGFLLLCP Trigger: GGGGCACAGTAGGAGGAACCCAGAAGATGCTGCCTCTCCTGATCATCTGTCTCCTGCCTGCCATTGAAGGGAAGAACTGCCTCCGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000454927.7 ENST00000568484.6 ENST00000637962.1 ENST00000643416.1 |
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| CDS CCA 90 bp | TCAATGGCAGGCAGGAGACAGATGATCAGGAGAGGCAGCATCTTCTaGGTTCCTCCTACTGTGCCCCAGTGCCCTGCCTGGAAGTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SMAGRRQMIRRGSIF*VPPTVPQCPAWKFH Trigger: GTGGAACTTCCAGGCAGGGCACTGGGGCACAGTAGGAGGAACCCAGAAGATGCTGCCTCTCCTGATCATCTGTCTCCTGCCTGCCATTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643416.1 |
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| CDS-3UTR CAA 90 bp | CAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACCCAGGATGGAGGTGCCTCCTTCTTCCTTaGCCAGTAAAAGAAACATCC | + |
|
Preference number: 5 (lower is better) Translates to: QRSLLGLRALGPQDPGWRCLLLP*PVKETS Trigger: GGATGTTTCTTTTACTGGCAAAGGAAGAAGGAGGCA...CCTCCATCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000636439.1 ENST00000636457.1 |
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| CDS-3UTR CAA 90 bp | GGGGGATGGGGTCACCGGGACCCAGAGATGAGTGAACTTTGTGACGGTGGTAGCCAAATGGTCACGATTTaGAGAAAGTTCTGTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGWGHRDPEMSELCDGGSQMVTI*RKFCGW Trigger: CCACCCACAGAACTTTCTCAAAATCGTGACCATTTG...GCTACCACCGTCACAAAGTTCACTCATCTCTGGGTCCCGGTGACCCCATCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 |
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| CDS-3UTR CAA 90 bp | CAAACCACGAGACAGCGCAGTCTCCTAGGCCTCAGAGCTTTGGGGCCCCAGGACTGCCTCCTTCTTCCTTaGCCAGTAAAAGAAACATCT | + |
|
Preference number: 5 (lower is better) Translates to: QTTRQRSLLGLRALGPQDCLLLP*PVKETS Trigger: AGATGTTTCTTTTACTGGCAAAGGAAGAAGGAGGCA...GTCCTGGGGCCCCAAAGCTCTGAGGCCTAGGAGACTGCGCTGTCTCGTGGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 |
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| CDS-3UTR CAA 90 bp | GGTTTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCACGAGACCTAGGCCTCAGAGCTTaGGGGCCCCAGGACCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GFNEETLYKGVGVGKPRDLGLRA*GPQDPG Trigger: TCCTGGGTCCTGGGGCCCCAAAGCTCTGAGGCCTAG...GTCTCGTGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENST00000436605.4 ENST00000441412.3 ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 ENST00000636439.1 ENST00000636457.1 |
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| CDS GCA 90 bp | GGAGCCCTAGAATTGGGTCGGGGTCTCCTTTCCCAGTACCTTTACTaGCTCCTTCTTCCTTTGCCAGTAAAAGAAACATCTGGGCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GALELGRGLLSQYLY*LLLPLPVKETSGPR Trigger: TCTTGGCCCAGATGTTTCTTTTACTGGCAAAGGAAGAAGGAGGCAGTAAAGGTACTGGGAAAGGAGACCCCGACCCAATTCTAGGGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637962.1 |
||
| CDS-3UTR CAA 90 bp | GGATGGGGTCACCGGGACCCAGAGATGAGTGAACTTTGTGACGGTGGTAGCTGCTCAAGGTACCAGGGTTaGAGAAAATTATTATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GWGHRDPEMSELCDGGSCSRYQG*RKLLSS Trigger: AGAGGATAATAATTTTCTCAAACCCTGGTACCTTGA...GCAGCTACCACCGTCACAAAGTTCACTCATCTCTGGGTCCCGGTGACCCCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636457.1 |
||
| CDS-3UTR CAA 90 bp | GCTATGAAGAGGGGTTTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCCTGGCACAGGACTCATaGCAGGCCTTCTCCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AMKRGFNEETLYKGVGVGLAQDS*QAFSFS Trigger: GCTGAAGGAGAAGGCCTGCAATGAGTCCTGTGCCAG...GCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAAACCCCTCTTCATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436605.4 |
||
| CDS-3UTR CAA 90 bp | AATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCACGAGACAGCGCATGCCTCCTTCTTCCTTaGCCAGTAAAAGAAACATCC | + |
|
Preference number: 5 (lower is better) Translates to: NEETLYKGVGVGKPRDSACLLLP*PVKETS Trigger: GGATGTTTCTTTTACTGGCAAAGGAAGAAGGAGGCA...TGCGCTGTCTCGTGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000636439.1 ENST00000636457.1 |
||
| CDS-3UTR CAA 90 bp | AATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCACGAGACAGCGCATGCCTCCTTCTTCCTTaGCCAGTAAAAGAAACATCT | + |
|
Preference number: 5 (lower is better) Translates to: NEETLYKGVGVGKPRDSACLLLP*PVKETS Trigger: AGATGTTTCTTTTACTGGCAAAGGAAGAAGGAGGCA...TGCGCTGTCTCGTGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 |
||
| CDS-3UTR CAA 90 bp | GGTTTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCAAACCACGAGACCAAATGGTCACGATTTaGAGAAAGTTCTGTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GFNEETLYKGVGVGKPRDQMVTI*RKFCGW Trigger: CCACCCACAGAACTTTCTCAAAATCGTGACCATTTG...GTCTCGTGGTTTGCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 |
||
| CDS-3UTR CAA 90 bp | GCTATGAAGAGGGGTTTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCCAAATGGTCACGATTTaGAGAAAGTTCTGTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AMKRGFNEETLYKGVGVGQMVTI*RKFCGW Trigger: CCACCCACAGAACTTTCTCAAAATCGTGACCATTTG...GCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAAACCCCTCTTCATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 |
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| CDS TCA 90 bp | TTGGCTTCCTCACCATCTCGTAACGTTTTAATGGCTTGGTGTACTTaGGTGAAGAATTTGGCTGTTTCTTCTTCCAAATGGTCACGATCA | + |
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Preference number: 5 (lower is better) Translates to: LASSPSRNVLMAWCT*VKNLAVSSSKWSRS Trigger: TGATCGTGACCATTTGGAAGAAGAAACAGCCAAATTCTTCACTCAAGTACACCAAGCCATTAAAACGTTACGAGATGGTGAGGAAGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437793.1 |
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| CDS-3UTR CAA 90 bp | GCTATGAAGAGGGGTTTTAATGAAGAGACTCTTTACAAAGGTGTAGGAGTAGGCTGCCTCCTTCTTCCTTaGCCAGTAAAAGAAACATCT | + |
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Preference number: 5 (lower is better) Translates to: AMKRGFNEETLYKGVGVGCLLLP*PVKETS Trigger: AGATGTTTCTTTTACTGGCAAAGGAAGAAGGAGGCA...GCCTACTCCTACACCTTTGTAAAGAGTCTCTTCATTAAAACCCCTCTTCATAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 |
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| CDS TCA 90 bp | AGTACTGTTTTATCATCTCGTAACGTTTTAATGGCTTGGTGTACTTaGGTGAAGAATTTGGCTGTTTCTTCTTCCAAATGGTCACGATCC | + |
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Preference number: 5 (lower is better) Translates to: STVLSSRNVLMAWCT*VKNLAVSSSKWSRS Trigger: GGATCGTGACCATTTGGAAGAAGAAACAGCCAAATTCTTCACTCAAGTACACCAAGCCATTAAAACGTTACGAGATGATAAAACAGTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000454927.7 ENST00000637962.1 |
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| CDS TCA 90 bp | AGTACTGTTTTATCATCTCGTAACGTTTTAATGGCTTGGTGTACTTaGGTGAAGAATTTGGCTGTTTCTTCTTCCAAATGGTCACGATCA | + |
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Preference number: 5 (lower is better) Translates to: STVLSSRNVLMAWCT*VKNLAVSSSKWSRS Trigger: TGATCGTGACCATTTGGAAGAAGAAACAGCCAAATTCTTCACTCAAGTACACCAAGCCATTAAAACGTTACGAGATGATAAAACAGTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000636457.1 ENST00000643416.1 |
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| CDS TCA 90 bp | AGTACTGTTTTATCATCTCGTAACGTTTTAATGGCTTGGTGTACTTaGGTGAAGAATTTGGCTGTTTCTTCTTCCAAATGGTCACGATTT | + |
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Preference number: 5 (lower is better) Translates to: STVLSSRNVLMAWCT*VKNLAVSSSKWSRF Trigger: AAATCGTGACCATTTGGAAGAAGAAACAGCCAAATTCTTCACTCAAGTACACCAAGCCATTAAAACGTTACGAGATGATAAAACAGTACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000450035.5 ENST00000458326.5 ENST00000568484.6 |
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| CDS CCA 72 bp | ATCTGCATGCCTTGGGTCTTGGCAGGTGTGGAGGGCTaGGCCGTGTGCAGGGATCGTCCCCACCCCTTACCC | + |
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Preference number: 6 (lower is better) Translates to: ICMPWVLAGVEG*AVCRDRPHPLP Trigger: GGGTAAGGGGTGGGGACGATCCCTGCACACGGCCCAGCCCTCCACACCTGCCAAGACCCAAGGCATGCAGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454927.7 |
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| CDS TCA 72 bp | TGCCACCTCCAGCTATGGCCAGGAGTAGAGCACTGCTaGGACTCACAGCCCACAGGGAGGTCCGCCGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: CHLQLWPGVEHC*DSQPTGRSAGS Trigger: GGAACCGGCGGACCTCCCTGTGGGCTGTGAGTCTCAGCAGTGCTCTACTCCTGGCCATAGCTGGAGGTGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441412.3 |
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| CDS TCA 72 bp | ACCCACCTCCAGCTATGGCCAGGAGTAGAGCACTGCTaGGACTCACAGCCCACAGGGAGGTCCGCCGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: THLQLWPGVEHC*DSQPTGRSAGS Trigger: GGAACCGGCGGACCTCCCTGTGGGCTGTGAGTCTCAGCAGTGCTCTACTCCTGGCCATAGCTGGAGGTGGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637962.1 |
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| CDS CCA 72 bp | GGGGGCTGCAGAGTGAAATCTGCATGCCTTGGGTCTTaGCAGGTGTGGAGGGCTGGGCCGTGTGCAGGGATC | + |
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Preference number: 6 (lower is better) Translates to: GGCRVKSACLGS*QVWRAGPCAGI Trigger: GATCCCTGCACACGGCCCAGCCCTCCACACCTGCCAAGACCCAAGGCATGCAGATTTCACTCTGCAGCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454927.7 |
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| CDS CAA 90 bp | TCACAAGACCTCCCACCCATGGCCACATGGGCCTCTGAGAATGCCTaGGAGGGTGGGCCTTTGTCAACCCAAGCCCCAAGGCCCTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: SQDLPPMATWASENA*EGGPLSTQAPRPWG Trigger: GCCCCAGGGCCTTGGGGCTTGGGTTGACAAAGGCCCACCCTCCAAGGCATTCTCAGAGGCCCATGTGGCCATGGGTGGGAGGTCTTGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437793.1 |
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| CDS TCA 72 bp | TTCCTGCTCCAGCTATGGCCAGGAGTAGAGCACTGCTaGGACTCACAGCCCACAGGGAGGTCCGCCGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: FLLQLWPGVEHC*DSQPTGRSAGS Trigger: GGAACCGGCGGACCTCCCTGTGGGCTGTGAGTCTCAGCAGTGCTCTACTCCTGGCCATAGCTGGAGCAGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436605.4 |
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| CDS TCA 72 bp | ATCCACCTCCAGCTATGGCCAGGAGTAGAGCACTGCTaGGACTCACAGCCCACAGGGAGGTCCGCCGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: IHLQLWPGVEHC*DSQPTGRSAGS Trigger: GGAACCGGCGGACCTCCCTGTGGGCTGTGAGTCTCAGCAGTGCTCTACTCCTGGCCATAGCTGGAGGTGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000636439.1 ENST00000636457.1 ENST00000643416.1 |
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| CDS CAA 72 bp | CTCCCACCCATGGCCACATGGGCCTCTGAGAATGCCTaGGAGGGTGGGCCTTTGTCAACCCAAGCCCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: LPPMATWASENA*EGGPLSTQAPR Trigger: CCTTGGGGCTTGGGTTGACAAAGGCCCACCCTCCAAGGCATTCTCAGAGGCCCATGTGGCCATGGGTGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437793.1 |
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| CDS GCA 72 bp | GTGGTAGCTGCGGCCTCTGTTCACTTCTGGAAGACATaGGGGCTGCCCTGTTCCTGCTCCAGCTATGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: VVAAASVHFWKT*GLPCSCSSYGQ Trigger: CTGGCCATAGCTGGAGCAGGAACAGGGCAGCCCGCATGTCTTCCAGAAGTGAACAGAGGCCGCAGCTACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436605.4 |
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| CDS GCA 72 bp | GTGGTAGCTGCGGCCTCTGTTCACTTCTGGAAGACATaGGGGCTGCCCTGTTCCTGCCACCTCCAGCTATGG | + |
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Preference number: 6 (lower is better) Translates to: VVAAASVHFWKT*GLPCSCHLQLW Trigger: CCATAGCTGGAGGTGGCAGGAACAGGGCAGCCCGCATGTCTTCCAGAAGTGAACAGAGGCCGCAGCTACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441412.3 |
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| CDS CCA 72 bp | GGCAGGAGACAGATGATCAGGAGAGGCAGCATCTTCTaGGTTCCTCCTACTGTGCCCCAGTGCCCTGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GRRQMIRRGSIF*VPPTVPQCPAW Trigger: CCAGGCAGGGCACTGGGGCACAGTAGGAGGAACCCAGAAGATGCTGCCTCTCCTGATCATCTGTCTCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643416.1 |
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| CDS CCA 72 bp | TTTGTGACGGTGGTAGCTGCGGCCTCTGTTCACTTCTaGAAGACATGCGGGCTGCCCTGTTCCTGCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: FVTVVAAASVHF*KTCGLPCSCSS Trigger: GCTGGAGCAGGAACAGGGCAGCCCGCATGTCTTCCAGAAGTGAACAGAGGCCGCAGCTACCACCGTCACAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436605.4 |
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| CDS TCA 72 bp | TTCACAAGACCTCCCACCCATGGCCACATGGGCCTCTaGGAATGCCTTGGAGGGTGGGCCTTTGTCAACCCA | + |
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Preference number: 6 (lower is better) Translates to: FTRPPTHGHMGL*ECLGGWAFVNP Trigger: TGGGTTGACAAAGGCCCACCCTCCAAGGCATTCTCAGAGGCCCATGTGGCCATGGGTGGGAGGTCTTGTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437793.1 |
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| CDS CAA 72 bp | GGGCACACCCAGCTTTTCCCTCTGGGAGCCCTAGAATaGGGTCGGGGTCTCCTTTCCCAGTACCTTTACTGC | + |
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Preference number: 6 (lower is better) Translates to: GHTQLFPLGALE*GRGLLSQYLYC Trigger: GCAGTAAAGGTACTGGGAAAGGAGACCCCGACCCAATTCTAGGGCTCCCAGAGGGAAAAGCTGGGTGTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000637962.1 ENST00000643416.1 |
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| CDS GCA 72 bp | GTGGTAGCTGCGGCCTCTGTTCACTTCTGGAAGACATaGGGGCTGCCCTGTTCCTTTACTGCCTCCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VVAAASVHFWKT*GLPCSFTASFF Trigger: GAAGAAGGAGGCAGTAAAGGAACAGGGCAGCCCGCATGTCTTCCAGAAGTGAACAGAGGCCGCAGCTACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568484.6 |
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| CDS CCA 72 bp | TTTGTGACGGTGGTAGCTGCGGCCTCTGTTCACTTCTaGAAGACATGCGGGCTGCCCTGTTCCTTTACTGCC | + |
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Preference number: 6 (lower is better) Translates to: FVTVVAAASVHF*KTCGLPCSFTA Trigger: GGCAGTAAAGGAACAGGGCAGCCCGCATGTCTTCCAGAAGTGAACAGAGGCCGCAGCTACCACCGTCACAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568484.6 |
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| CDS CCA 72 bp | GATCTGCAGGTCATAGTCTATCAAGGCAGACAGTTCTaGCCAGCAGCGGAGGCAGTTCTTCCCTTCAATGGC | + |
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Preference number: 6 (lower is better) Translates to: DLQVIVYQGRQF*PAAEAVLPFNG Trigger: GCCATTGAAGGGAAGAACTGCCTCCGCTGCTGGCCAGAACTGTCTGCCTTGATAGACTATGACCTGCAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000437793.1 ENST00000450035.5 ENST00000454927.7 ENST00000458326.5 ENST00000568484.6 ENST00000636457.1 ENST00000637962.1 ENST00000643416.1 |
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| CDS CCA 72 bp | GAACAAGGAGTGAATACTTTGAGAAAGTTCTGTGGGTaGCCCTGGGGTCACCCAGAGGATCTGCAGGTCATA | + |
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Preference number: 6 (lower is better) Translates to: EQGVNTLRKFCG*PWGHPEDLQVI Trigger: TATGACCTGCAGATCCTCTGGGTGACCCCAGGGCCACCCACAGAACTTTCTCAAAGTATTCACTCCTTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000437793.1 ENST00000454927.7 ENST00000636457.1 ENST00000637962.1 ENST00000643416.1 |
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