Pregenerated sensors for TEX38 (Homo sapiens)
Ensembl gene IDs: ENSG00000186118Ensembl transcript IDs: ENST00000334122.5, ENST00000415500.1, ENST00000564071.1, ENST00000564373.1
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGCATGACATCCAGGTGGGTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTATTCCTACTCTGCACCTaGTTCCTGCAGCTCCCACCT | + |
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Preference number: 2 (lower is better) Translates to: SMTSRWVLTSVNTTFLRLFLLCT*FLQLPP Trigger: AGGTGGGAGCTGCAGGAATCAGGTGCAGAGTAGGAA...TAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGACCCACCTGGATGTCATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR GCA 90 bp | GACATCCAGGTGGGTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCAGCTGCAGTGCAGGTTaGAGGGGAGCAGGGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: DIQVGPDLCQYHLPEVSSSCSAG*RGAGAS Trigger: GGAAGCCCCTGCTCCCCTGCAACCTGCACTGCAGCT...GGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGACCCACCTGGATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR TCA 90 bp | AGCATGACATCCAGGTGGGTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGGGCAGGGCCCGTGTTaGTGGCTGCATTCATGCCGT | + |
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Preference number: 4 (lower is better) Translates to: SMTSRWVLTSVNTTFLRLGQGPC*WLHSCR Trigger: ACGGCATGAATGCAGCCATCAACACGGGCCCTGCCC...TAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGACCCACCTGGATGTCATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR TCA 90 bp | GTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTTCCTACTCTGCAGTCTCAGTCTTGGTaGCAGCAGGGGCAGGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: VLTSVNTTFLRLVPFPTLQSQSW*QQGQGP Trigger: CGGGCCCTGCCCCTGCTGTCACCAAGACTGAGACTG...CAGAGTAGGAAATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR CCA 90 bp | TTTCATAGCATGACATCCAGGTGGGTCCTGACCTCTGTCAATACCACCTTCCTGAATGGGGATCTGGCCTaGGGCTGCTGTGGAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: FHSMTSRWVLTSVNTTFLNGDLA*GCCGAS Trigger: GCTGGCTCCACAGCAGCCCCAGGCCAGATCCCCATT...CAGGAAGGTGGTATTGACAGAGGTCAGGACCCACCTGGATGTCATGCTATGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR GCA 90 bp | TCCAGGTGGGTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTTATCACCTCCACCCACTaGTGGGCATGCTCTTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: SRWVLTSVNTTFLRLVPFITSTH*WACSSR Trigger: GCGGGAAGAGCATGCCCAGCAGTGGGTGGAGGTGAT...AAATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGACCCACCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR GCA 90 bp | TCCAGGTGGGTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTTTGCTGTGGAGCCAGCTaGAGTGCAGGTTGCAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: SRWVLTSVNTTFLRLVPFCCGAS*SAGCRG Trigger: TCCCCTGCAACCTGCACTGCAGCTGGCTCCACAGCA...AAATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGACCCACCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR GCA 90 bp | GACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTTCCTACTCTGCACCTGATCTGGCCTGGGGCTaGTGTGGAGCCAGCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: DLCQYHLPEVSSISYSAPDLAWG*CGASCS Trigger: ACTGCAGCTGGCTCCACAGCAGCCCCAGGCCAGATC...AGGTGCAGAGTAGGAAATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR CCA 90 bp | AGCATGACATCCAGGTGGGTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTATTGGTACCTGGCCGATaGCTCTGGGGAGAGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SMTSRWVLTSVNTTFLRLLVPGR*LWGEGT Trigger: AGTTCCCTCTCCCCAGAGCCATCGGCCAGGTACCAA...TAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGACCCACCTGGATGTCATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR CCA 90 bp | GACATCCAGGTGGGTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCTTGGGGTTGCTGTCTTaGTCAGCATGGCTCCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: DIQVGPDLCQYHLPEVSSLGLLS*SAWLLP Trigger: AGGCAGGAGCCATGCTGACCAAGACAGCAACCCCAA...GGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGACCCACCTGGATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR CCA 90 bp | GGTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTTCCTACTCTGTGGGAATGGGGATCTaGCCTGGGGCTGCTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GPDLCQYHLPEVSSISYSVGMGI*PGAAVE Trigger: CTCCACAGCAGCCCCAGGCCAGATCCCCATTCCCAC...AGAGTAGGAAATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR GCA 90 bp | GACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTTCCTACTCTGCACCTGCCCGTGTTGATGGCTaGATTCATGCCGTAGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: DLCQYHLPEVSSISYSAPARVDG*IHAVAP Trigger: CGGCGCTACGGCATGAATGCAGCCATCAACACGGGC...AGGTGCAGAGTAGGAAATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR GCA 90 bp | GTGGGTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTTCCTACCTTCCGCCTTGGGGTTaGTGTCTTGGTCAGCATGGC | + |
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Preference number: 4 (lower is better) Translates to: VGPDLCQYHLPEVSSISYLPPWG*CLGQHG Trigger: GCCATGCTGACCAAGACAGCAACCCCAAGGCGGAAG...GTAGGAAATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGACCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR CCA 90 bp | GTGGGTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTTCCTACCTGAGCTTTGGTACCTaGCCGATGGCTCTGGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: VGPDLCQYHLPEVSSISYLSFGT*PMALGR Trigger: TCTCCCCAGAGCCATCGGCCAGGTACCAAAGCTCAG...GTAGGAAATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGACCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR CCA 90 bp | CCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTTCCTACTCTGCACAGGGGCTTCCGCCTTaGGGTTGCTGTCTTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PDLCQYHLPEVSSISYSAQGLPP*GCCLGQ Trigger: CTGACCAAGACAGCAACCCCAAGGCGGAAGCCCCTG...TGCAGAGTAGGAAATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR TCA 90 bp | ATCCAGGTGGGTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTGGGAATCCATACAGCTaGGCTTTGGTACCTGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: IQVGPDLCQYHLPEVSSIGNPYS*ALVPGR Trigger: TCGGCCAGGTACCAAAGCTCAGCTGTATGGATTCCC...AATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGACCCACCTGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR GCA 90 bp | TTTCATAGCATGACATCCAGGTGGGTCCTGACCTCTGTCAATACCACCTTCCTGGGTCAGCATGGCTCCTaGCTTCGGGGATGTCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: FHSMTSRWVLTSVNTTFLGQHGS*LRGCPN Trigger: ATTTGGACATCCCCGAAGGCAGGAGCCATGCTGACC...CAGGAAGGTGGTATTGACAGAGGTCAGGACCCACCTGGATGTCATGCTATGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR CCA 90 bp | CTTTTAATGTTTCATAGCATGACATCCAGGTGGGTCCTGACCTCTGTCAATACCCCTGGCCGATGGCTCTaGGGAGAGGGAACTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLMFHSMTSRWVLTSVNTPGRWL*GEGTHP Trigger: TGGGTGAGTTCCCTCTCCCCAGAGCCATCGGCCAGG...GGTATTGACAGAGGTCAGGACCCACCTGGATGTCATGCTATGAAACATTAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR CCA 90 bp | GTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTTCCTACTCTGCTGTCTTGGTCAGCATaGCTCCTGCCTTCGGGGATG | + |
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Preference number: 4 (lower is better) Translates to: VLTSVNTTFLRLVPFPTLLSWSA*LLPSGM Trigger: CATCCCCGAAGGCAGGAGCCATGCTGACCAAGACAG...CAGAGTAGGAAATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR TCA 90 bp | GTGGGTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTTCCTACGCAAAGGGCACCTCCTaGAAGATGGGAAGTGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: VGPDLCQYHLPEVSSISYAKGTS*KMGSGN Trigger: ATTCCCACTTCCCATCTTTCAGGAGGTGCCCTTTGC...GTAGGAAATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGACCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR TCA 90 bp | GGTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTTCCTACTCTTTCCTACTCTGCACCTaGTTCCTGCAGCTCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GPDLCQYHLPEVSSISYSFLLCT*FLQLPP Trigger: AGGTGGGAGCTGCAGGAATCAGGTGCAGAGTAGGAA...AGAGTAGGAAATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR CCA 90 bp | TTTCATAGCATGACATCCAGGTGGGTCCTGACCTCTGTCAATACCACCTTCCTGCATACAGCTGAGCTTTaGTACCTGGCCGATGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FHSMTSRWVLTSVNTTFLHTAEL*YLADGS Trigger: AGAGCCATCGGCCAGGTACCAAAGCTCAGCTGTATG...CAGGAAGGTGGTATTGACAGAGGTCAGGACCCACCTGGATGTCATGCTATGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR CCA 90 bp | CCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTTCCTACTCTGCACGCAGGTCCTCCTGTTaGGAATCCATACAGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: PDLCQYHLPEVSSISYSARRSSC*ESIQLS Trigger: GCTCAGCTGTATGGATTCCCAACAGGAGGACCTGCG...TGCAGAGTAGGAAATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR CCA 90 bp | GACATCCAGGTGGGTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATCCCACAGAACATCTaGATTCTGGACCTCAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: DIQVGPDLCQYHLPEVSSIPQNI*ILDLSL Trigger: GAGACTGAGGTCCAGAATCCAGATGTTCTGTGGGAT...GGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGACCCACCTGGATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR CCA 90 bp | AGCATGACATCCAGGTGGGTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAAAGCTATGGTCTTCCTaGGCCAGATTCAGGAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: SMTSRWVLTSVNTTFLRLKLWSS*ARFRRE Trigger: TTCCCTCCTGAATCTGGCCCAGGAAGACCATAGCTT...TAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGACCCACCTGGATGTCATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR GCA 90 bp | CTTTTAATGTTTCATAGCATGACATCCAGGTGGGTCCTGACCTCTGTCAATACCACCCACTGCTGGGCATaGTCTTCCCGCCTCAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: LLMFHSMTSRWVLTSVNTTHCWA*SSRLKF Trigger: GAACTTGAGGCGGGAAGAGCATGCCCAGCAGTGGGT...GGTATTGACAGAGGTCAGGACCCACCTGGATGTCATGCTATGAAACATTAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR CCA 90 bp | ATGACATCCAGGTGGGTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTTCCTTTCAGGACAGGTaGCCAAAGGATAGGAGACAG | + |
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Preference number: 4 (lower is better) Translates to: MTSRWVLTSVNTTFLRLVSFQDR*PKDRRQ Trigger: CTGTCTCCTATCCTTTGGCCACCTGTCCTGAAAGGA...AACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGACCCACCTGGATGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR CCA 90 bp | GGTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTTCCTACTCTAGCATGACATCCAGGTaGGTCCTGACCTCTGTCAAT | + |
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Preference number: 4 (lower is better) Translates to: GPDLCQYHLPEVSSISYSSMTSR*VLTSVN Trigger: ATTGACAGAGGTCAGGACCCACCTGGATGTCATGCT...AGAGTAGGAAATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR TCA 90 bp | CCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTTCCTACTCTGCAGATTCCAAAGTACAATaGGACCCACATCCCAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: PDLCQYHLPEVSSISYSADSKVQ*DPHPRE Trigger: TTCCCTGGGATGTGGGTCTCATTGTACTTTGGAATC...TGCAGAGTAGGAAATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR TCA 90 bp | CCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTTCCTACTCTGCAAGGAGGCTACAGTTCTaGAGGAAAAGGCTTGGCATT | + |
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Preference number: 4 (lower is better) Translates to: PDLCQYHLPEVSSISYSARRLQF*RKRLGI Trigger: AATGCCAAGCCTTTTCCTTCAGAACTGTAGCCTCCT...TGCAGAGTAGGAAATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR CCA 90 bp | ATGACATCCAGGTGGGTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTAATCCAGTACAACAATaGGCTGTAGGTGAATGTGGC | + |
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Preference number: 4 (lower is better) Translates to: MTSRWVLTSVNTTFLRLVNPVQQ*AVGECG Trigger: GCCACATTCACCTACAGCCCATTGTTGTACTGGATT...AACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGACCCACCTGGATGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR CCA 90 bp | TTTCATAGCATGACATCCAGGTGGGTCCTGACCTCTGTCAATACCACCTTCCTGAGAACATCTGGATTCTaGACCTCAGTCTCAGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: FHSMTSRWVLTSVNTTFLRTSGF*TSVSVL Trigger: CAAGACTGAGACTGAGGTCCAGAATCCAGATGTTCT...CAGGAAGGTGGTATTGACAGAGGTCAGGACCCACCTGGATGTCATGCTATGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR CCA 90 bp | GTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTTCCTACTCTGTTGGCATTGAAGCTATaGTCTTCCTGGGCCAGATTC | + |
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Preference number: 4 (lower is better) Translates to: VLTSVNTTFLRLVPFPTLLALKL*SSWARF Trigger: GAATCTGGCCCAGGAAGACCATAGCTTCAATGCCAA...CAGAGTAGGAAATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR TCA 90 bp | CTTTTAATGTTTCATAGCATGACATCCAGGTGGGTCCTGACCTCTGTCAATACCACAATGGGCTGTAGGTaGATGTGGCAGCTCTCATCA | + |
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Preference number: 4 (lower is better) Translates to: LLMFHSMTSRWVLTSVNTTMGCR*MWQLSS Trigger: TGATGAGAGCTGCCACATTCACCTACAGCCCATTGT...GGTATTGACAGAGGTCAGGACCCACCTGGATGTCATGCTATGAAACATTAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS TCA 90 bp | GGGTCCCAGGGAAGCGCAGGTCCTCCTGTTGGGAATCCATACAGCTaGGCTTTGGTACCTGGCCGATGGCTCTGGGGAGAGGGAACTCAC | + |
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Preference number: 5 (lower is better) Translates to: GSQGSAGPPVGNPYS*ALVPGRWLWGEGTH Trigger: GTGAGTTCCCTCTCCCCAGAGCCATCGGCCAGGTACCAAAGCTCAGCTGTATGGATTCCCAACAGGAGGACCTGCGCTTCCCTGGGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415500.1 |
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| CDS CCA 90 bp | CGCAGGTCCTCCTGTTGGGAATCCATACAGCTGAGCTTTGGTACCTaGCCGATGGCTCTGGGGAGAGGGAACTCACCCACCCATCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: RRSSCWESIQLSFGT*PMALGRGNSPTHLP Trigger: GGGCAGATGGGTGGGTGAGTTCCCTCTCCCCAGAGCCATCGGCCAGGTACCAAAGCTCAGCTGTATGGATTCCCAACAGGAGGACCTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334122.5 ENST00000415500.1 |
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| CDS CCA 90 bp | AGGGAAGCGCAGGTCCTCCTGTTGGGAATCCATACAGCTGAGCTTTaGTACCTGGCCGATGGCTCTGGGGAGAGGGAACTCACCCACCCA | + |
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Preference number: 5 (lower is better) Translates to: REAQVLLLGIHTAEL*YLADGSGERELTHP Trigger: TGGGTGGGTGAGTTCCCTCTCCCCAGAGCCATCGGCCAGGTACCAAAGCTCAGCTGTATGGATTCCCAACAGGAGGACCTGCGCTTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000334122.5 ENST00000415500.1 ENST00000564373.1 |
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| CDS TCA 90 bp | ACATCCCAGGGAAGCGCAGGTCCTCCTGTTGGGAATCCATACAGCTaGGCTTTGGTACCTGGCCGATGGCTCTGGGGAGAGGGAACTCAC | + |
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Preference number: 5 (lower is better) Translates to: TSQGSAGPPVGNPYS*ALVPGRWLWGEGTH Trigger: GTGAGTTCCCTCTCCCCAGAGCCATCGGCCAGGTACCAAAGCTCAGCTGTATGGATTCCCAACAGGAGGACCTGCGCTTCCCTGGGATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS TCA 90 bp | TTCTCCCAGGGAAGCGCAGGTCCTCCTGTTGGGAATCCATACAGCTaGGCTTTGGTACCTGGCCGATGGCTCTGGGGAGAGGGAACTCAC | + |
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Preference number: 5 (lower is better) Translates to: FSQGSAGPPVGNPYS*ALVPGRWLWGEGTH Trigger: GTGAGTTCCCTCTCCCCAGAGCCATCGGCCAGGTACCAAAGCTCAGCTGTATGGATTCCCAACAGGAGGACCTGCGCTTCCCTGGGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564373.1 |
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| CDS TCA 90 bp | CACAGGGCAGGGCTCAGGGCTGATCTCCATGAGCATAGGTTGGATTaGGCAGAGTTGAAGGCTCTGCCCCTGTCCCAGGAGGGGCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: HRAGLRADLHEHRLD*AELKALPLSQEGLQ Trigger: TTGAAGCCCCTCCTGGGACAGGGGCAGAGCCTTCAACTCTGCTCAATCCAACCTATGCTCATGGAGATCAGCCCTGAGCCCTGCCCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564071.1 |
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| CDS CCA 90 bp | TTCCCGCCTCAAGTTCTTCTCCCAGGGAAGCGCAGGTCCTCCTGTTaGGAATCCATACAGCTGAGCTTTGGTACCTGGCCGATGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: FPPQVLLPGKRRSSC*ESIQLSFGTWPMAL Trigger: CAGAGCCATCGGCCAGGTACCAAAGCTCAGCTGTATGGATTCCCAACAGGAGGACCTGCGCTTCCCTGGGAGAAGAACTTGAGGCGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564373.1 |
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| CDS GCA 90 bp | AGTCTCAGTCTTGGTGACAGCAGGGGCAGGGCCCGTGTTGATGGCTaGATTCATGCCGTAGCGCCGTCGCTTGTTAATCCAGTACAACAA | + |
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Preference number: 5 (lower is better) Translates to: SLSLGDSRGRARVDG*IHAVAPSLVNPVQQ Trigger: TTGTTGTACTGGATTAACAAGCGACGGCGCTACGGCATGAATGCAGCCATCAACACGGGCCCTGCCCCTGCTGTCACCAAGACTGAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000334122.5 ENST00000415500.1 ENST00000564071.1 ENST00000564373.1 |
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| CDS CCA 90 bp | AAGTACAATGAGACCCACATCCCAGGGAAGCGCAGGTCCTCCTGTTaGGAATCCATACAGCTGAGCTTTGGTACCTGGCCGATGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: KYNETHIPGKRRSSC*ESIQLSFGTWPMAL Trigger: CAGAGCCATCGGCCAGGTACCAAAGCTCAGCTGTATGGATTCCCAACAGGAGGACCTGCGCTTCCCTGGGATGTGGGTCTCATTGTACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS CCA 90 bp | AATCCAGTACAACAATGGGTCCCAGGGAAGCGCAGGTCCTCCTGTTaGGAATCCATACAGCTGAGCTTTGGTACCTGGCCGATGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: NPVQQWVPGKRRSSC*ESIQLSFGTWPMAL Trigger: CAGAGCCATCGGCCAGGTACCAAAGCTCAGCTGTATGGATTCCCAACAGGAGGACCTGCGCTTCCCTGGGACCCATTGTTGTACTGGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415500.1 |
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| CDS-3UTR CAA 90 bp | GTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTTCCTACTCTGGGGGCAGGGCCCGTGTaGATGGCTGCATTCATGCCG | + |
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Preference number: 5 (lower is better) Translates to: VLTSVNTTFLRLVPFPTLGAGPV*MAAFMP Trigger: CGGCATGAATGCAGCCATCAACACGGGCCCTGCCCC...CAGAGTAGGAAATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS TCA 90 bp | GGCTCAGGGCTGATCTCCATGAGCATAGGTTGGATTGAGCAGAGTTaGAGGCTCTGCCCCTGTCCCAGGAGGGGCTTCAATCAGACAAAA | + |
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Preference number: 5 (lower is better) Translates to: GSGLISMSIGWIEQS*RLCPCPRRGFNQTK Trigger: TTTTGTCTGATTGAAGCCCCTCCTGGGACAGGGGCAGAGCCTTCAACTCTGCTCAATCCAACCTATGCTCATGGAGATCAGCCCTGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564071.1 |
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| CDS GCA 90 bp | ACCCACTGCTGGGCATGCTCTTCCCGCCTCAAGTTCTTCCTCCAGTaGAGAAAGATAATGCACCCTCCAGTTATCACAGAACACAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: THCWACSSRLKFFLQ*RKIMHPPVITEHSP Trigger: GGGGCTGTGTTCTGTGATAACTGGAGGGTGCATTATCTTTCTGCACTGGAGGAAGAACTTGAGGCGGGAAGAGCATGCCCAGCAGTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334122.5 ENST00000564071.1 |
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| CDS-3UTR CAA 90 bp | GTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTTCCTACTCTGGCAGGGGCTTCCGCCTaGGGGTTGCTGTCTTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: VLTSVNTTFLRLVPFPTLAGASA*GLLSWS Trigger: TGACCAAGACAGCAACCCCAAGGCGGAAGCCCCTGC...CAGAGTAGGAAATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS CCA 90 bp | TGCATTCATGCCGTAGCGCCGTCGCTTGTTAATCCAGTACAACAATaGGCTGTAGGTGAATGTGGCAGCTCTCATCACCTCCACCCACTG | + |
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Preference number: 5 (lower is better) Translates to: CIHAVAPSLVNPVQQ*AVGECGSSHHLHPL Trigger: CAGTGGGTGGAGGTGATGAGAGCTGCCACATTCACCTACAGCCCATTGTTGTACTGGATTAACAAGCGACGGCGCTACGGCATGAATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000334122.5 ENST00000564071.1 ENST00000564373.1 |
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| CDS-3UTR CAA 90 bp | CTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTTCCTACTCTGCACCTTGGGGTTGCTGTCTaGGTCAGCATGGCTCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: LTSVNTTFLRLVPFPTLHLGVAV*VSMAPA Trigger: GGCAGGAGCCATGCTGACCAAGACAGCAACCCCAAG...GTGCAGAGTAGGAAATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR CAA 90 bp | GGTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGTTCCATTTCCTACTCTGCTTCCGCCTTGGGGTaGCTGTCTTGGTCAGCATGG | + |
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Preference number: 5 (lower is better) Translates to: GPDLCQYHLPEVSSISYSASALG*LSWSAW Trigger: CCATGCTGACCAAGACAGCAACCCCAAGGCGGAAGC...AGAGTAGGAAATGGAACTAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS TCA 90 bp | CAGAACACAGCCCCAGGATTCCAAAGTACAATGAGACCCACAATGTaGACTGAGCCCTTAGATGATGAGGAGGCAGCCACATGCAGATCC | + |
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Preference number: 5 (lower is better) Translates to: QNTAPGFQSTMRPTM*TEPLDDEEAATCRS Trigger: GGATCTGCATGTGGCTGCCTCCTCATCATCTAAGGGCTCAGTTCACATTGTGGGTCTCATTGTACTTTGGAATCCTGGGGCTGTGTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564071.1 |
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| CDS-3UTR CAA 90 bp | AGCATGACATCCAGGTGGGTCCTGACCTCTGTCAATACCACCTTCCTGAGGTTAGGAAAAGGCTTGGCATaGAAGCTATGGTCTTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SMTSRWVLTSVNTTFLRLGKGLA*KLWSSW Trigger: CCAGGAAGACCATAGCTTCAATGCCAAGCCTTTTCC...TAACCTCAGGAAGGTGGTATTGACAGAGGTCAGGACCCACCTGGATGTCATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS-3UTR CAA 90 bp | CTTTTAATGTTTCATAGCATGACATCCAGGTGGGTCCTGACCTCTGTCAATACCGCGCAGGTCCTCCTGTaGGGAATCCATACAGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: LLMFHSMTSRWVLTSVNTAQVLL*GIHTAE Trigger: CTCAGCTGTATGGATTCCCAACAGGAGGACCTGCGC...GGTATTGACAGAGGTCAGGACCCACCTGGATGTCATGCTATGAAACATTAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334122.5 |
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| CDS TCA 90 bp | CAGCCACATGCAGATCCACAGAGAAAACAGCAAGTGTTAGGAGTGTaGGCCAGGTATGGGCTGGCATACTTGAAGGACTTATTCATCTTC | + |
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Preference number: 5 (lower is better) Translates to: QPHADPQRKQQVLGV*ARYGLAYLKDLFIF Trigger: GAAGATGAATAAGTCCTTCAAGTATGCCAGCCCATACCTGGCTCACACTCCTAACACTTGCTGTTTTCTCTGTGGATCTGCATGTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564071.1 |
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| CDS TCA 90 bp | TTGAGAGAATGGAAGGAGAGAGGATTCCAGGGGTCAAAAAGGGCCTaGATAAGGACTCTTCAAGGAGTAATCCTGGTGTTTCTTTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: LREWKERGFQGSKRA*IRTLQGVILVFLWE Trigger: CTCCCAAAGAAACACCAGGATTACTCCTTGAAGAGTCCTTATTCAGGCCCTTTTTGACCCCTGGAATCCTCTCTCCTTCCATTCTCTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000564071.1 |
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| CDS CCA 90 bp | AGATCCACAGAGAAAACAGCAAGTGTTAGGAGTGTGAGCCAGGTATaGGCTGGCATACTTGAAGGACTTATTCATCTTCCATTACACTGT | + |
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Preference number: 5 (lower is better) Translates to: RSTEKTASVRSVSQV*AGILEGLIHLPLHC Trigger: ACAGTGTAATGGAAGATGAATAAGTCCTTCAAGTATGCCAGCCCATACCTGGCTCACACTCCTAACACTTGCTGTTTTCTCTGTGGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564071.1 |
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| CDS CCA 72 bp | GCAGTGCAGGTTGCAGGGGAGCAGGGGCTTCCGCCTTaGGGTTGCTGTCTTGGTCAGCATGGCTCCTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: AVQVAGEQGLPP*GCCLGQHGSCL Trigger: AAGGCAGGAGCCATGCTGACCAAGACAGCAACCCCAAGGCGGAAGCCCCTGCTCCCCTGCAACCTGCACTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000334122.5 ENST00000415500.1 ENST00000564071.1 ENST00000564373.1 |
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| CDS TCA 72 bp | GGAAGCGCAGGTCCTCCTGTTGGGAATCCATACAGCTaGGCTTTGGTACCTGGCCGATGGCTCTGGGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: GSAGPPVGNPYS*ALVPGRWLWGE Trigger: CTCTCCCCAGAGCCATCGGCCAGGTACCAAAGCTCAGCTGTATGGATTCCCAACAGGAGGACCTGCGCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000334122.5 ENST00000415500.1 ENST00000564373.1 |
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| CDS GCA 72 bp | CTTGGTGACAGCAGGGGCAGGGCCCGTGTTGATGGCTaGATTCATGCCGTAGCGCCGTCGCTTGTTAATCCA | + |
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Preference number: 6 (lower is better) Translates to: LGDSRGRARVDG*IHAVAPSLVNP Trigger: TGGATTAACAAGCGACGGCGCTACGGCATGAATGCAGCCATCAACACGGGCCCTGCCCCTGCTGTCACCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000334122.5 ENST00000415500.1 ENST00000564071.1 ENST00000564373.1 |
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| CDS CAA 90 bp | CTTCCCGCCTCAAGTTCTTCTCCCAGGGAAGCGCAGGTCCTCCTGTaGGGAATCCATACAGCTGAGCTTTGGTACCTGGCCGATGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LPASSSSPREAQVLL*GIHTAELWYLADGS Trigger: AGAGCCATCGGCCAGGTACCAAAGCTCAGCTGTATGGATTCCCAACAGGAGGACCTGCGCTTCCCTGGGAGAAGAACTTGAGGCGGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564373.1 |
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| CDS GCA 72 bp | CCGCCTTGGGGTTGCTGTCTTGGTCAGCATGGCTCCTaGCTTCGGGGATGTCCAAATCCCACAGAACATCTG | + |
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Preference number: 6 (lower is better) Translates to: PPWGCCLGQHGS*LRGCPNPTEHL Trigger: CAGATGTTCTGTGGGATTTGGACATCCCCGAAGGCAGGAGCCATGCTGACCAAGACAGCAACCCCAAGGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000334122.5 ENST00000415500.1 ENST00000564071.1 ENST00000564373.1 |
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| CDS CCA 72 bp | TCCTGTTGGGAATCCATACAGCTGAGCTTTGGTACCTaGCCGATGGCTCTGGGGAGAGGGAACTCACCCACC | + |
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Preference number: 6 (lower is better) Translates to: SCWESIQLSFGT*PMALGRGNSPT Trigger: GGTGGGTGAGTTCCCTCTCCCCAGAGCCATCGGCCAGGTACCAAAGCTCAGCTGTATGGATTCCCAACAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000334122.5 ENST00000415500.1 ENST00000564373.1 |
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| CDS CCA 72 bp | CAGGTCCTCCTGTTGGGAATCCATACAGCTGAGCTTTaGTACCTGGCCGATGGCTCTGGGGAGAGGGAACTC | + |
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Preference number: 6 (lower is better) Translates to: QVLLLGIHTAEL*YLADGSGEREL Trigger: GAGTTCCCTCTCCCCAGAGCCATCGGCCAGGTACCAAAGCTCAGCTGTATGGATTCCCAACAGGAGGACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000334122.5 ENST00000415500.1 ENST00000564373.1 |
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| CDS CCA 72 bp | GTGAATGTGGCAGCTCTCATCACCTCCACCCACTGCTaGGCATGCTCTTCCCGCCTCAAGTTCTTCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: VNVAALITSTHC*ACSSRLKFFLQ Trigger: CTGGAGGAAGAACTTGAGGCGGGAAGAGCATGCCCAGCAGTGGGTGGAGGTGATGAGAGCTGCCACATTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334122.5 ENST00000564071.1 |
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| CDS CCA 72 bp | GTGAATGTGGCAGCTCTCATCACCTCCACCCACTGCTaGGCATGCTCTTCCCGCCTCAAGTTCTTCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: VNVAALITSTHC*ACSSRLKFFSQ Trigger: CTGGGAGAAGAACTTGAGGCGGGAAGAGCATGCCCAGCAGTGGGTGGAGGTGATGAGAGCTGCCACATTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564373.1 |
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| CDS CAA 72 bp | ACAACAATGGGTCCCAGGGAAGCGCAGGTCCTCCTGTaGGGAATCCATACAGCTGAGCTTTGGTACCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: TTMGPREAQVLL*GIHTAELWYLA Trigger: GGCCAGGTACCAAAGCTCAGCTGTATGGATTCCCAACAGGAGGACCTGCGCTTCCCTGGGACCCATTGTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415500.1 |
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| CDS CAA 72 bp | TCAAGTTCTTCTCCCAGGGAAGCGCAGGTCCTCCTGTaGGGAATCCATACAGCTGAGCTTTGGTACCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: SSSSPREAQVLL*GIHTAELWYLA Trigger: GGCCAGGTACCAAAGCTCAGCTGTATGGATTCCCAACAGGAGGACCTGCGCTTCCCTGGGAGAAGAACTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564373.1 |
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| CDS CAA 90 bp | TCCAAATCCCACAGAACATCTGGATTCTGGACCTCAGTCTCAGTCTaGGTGACAGCAGGGGCAGGGCCCGTGTTGATGGCTGCATTCATG | + |
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Preference number: 6 (lower is better) Translates to: SKSHRTSGFWTSVSV*VTAGAGPVLMAAFM Trigger: CATGAATGCAGCCATCAACACGGGCCCTGCCCCTGCTGTCACCAAGACTGAGACTGAGGTCCAGAATCCAGATGTTCTGTGGGATTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000334122.5 ENST00000415500.1 ENST00000564071.1 ENST00000564373.1 |
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| CDS CCA 72 bp | GCCGTAGCGCCGTCGCTTGTTAATCCAGTACAACAATaGGCTGTAGGTGAATGTGGCAGCTCTCATCACCTC | + |
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Preference number: 6 (lower is better) Translates to: AVAPSLVNPVQQ*AVGECGSSHHL Trigger: GAGGTGATGAGAGCTGCCACATTCACCTACAGCCCATTGTTGTACTGGATTAACAAGCGACGGCGCTACGGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000334122.5 ENST00000564071.1 ENST00000564373.1 |
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| CDS CCA 72 bp | CCTGCCTTCGGGGATGTCCAAATCCCACAGAACATCTaGATTCTGGACCTCAGTCTCAGTCTTGGTGACAGC | + |
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Preference number: 6 (lower is better) Translates to: PAFGDVQIPQNI*ILDLSLSLGDS Trigger: GCTGTCACCAAGACTGAGACTGAGGTCCAGAATCCAGATGTTCTGTGGGATTTGGACATCCCCGAAGGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000334122.5 ENST00000415500.1 ENST00000564071.1 ENST00000564373.1 |
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| CDS TCA 72 bp | GCAGATCCACAGAGAAAACAGCAAGTGTTAGGAGTGTaGGCCAGGTATGGGCTGGCATACTTGAAGGACTTA | + |
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Preference number: 6 (lower is better) Translates to: ADPQRKQQVLGV*ARYGLAYLKDL Trigger: TAAGTCCTTCAAGTATGCCAGCCCATACCTGGCTCACACTCCTAACACTTGCTGTTTTCTCTGTGGATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564071.1 |
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| CDS CAA 90 bp | AAGGGCCTGAATAAGGACTCTTCAAGGAGTAATCCTGGTGTTTCTTaGGGAGAGAATAGGTCACTGTGGCTGGAGTTCAAGGAGGATGTC | + |
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Preference number: 6 (lower is better) Translates to: KGLNKDSSRSNPGVS*GENRSLWLEFKEDV Trigger: GACATCCTCCTTGAACTCCAGCCACAGTGACCTATTCTCTCCCAAAGAAACACCAGGATTACTCCTTGAAGAGTCCTTATTCAGGCCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564071.1 |
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| CDS CCA 72 bp | GAGAAAACAGCAAGTGTTAGGAGTGTGAGCCAGGTATaGGCTGGCATACTTGAAGGACTTATTCATCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: EKTASVRSVSQV*AGILEGLIHLP Trigger: TGGAAGATGAATAAGTCCTTCAAGTATGCCAGCCCATACCTGGCTCACACTCCTAACACTTGCTGTTTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564071.1 |
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| CDS CAA 72 bp | AATAAGGACTCTTCAAGGAGTAATCCTGGTGTTTCTTaGGGAGAGAATAGGTCACTGTGGCTGGAGTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: NKDSSRSNPGVS*GENRSLWLEFK Trigger: CTTGAACTCCAGCCACAGTGACCTATTCTCTCCCAAAGAAACACCAGGATTACTCCTTGAAGAGTCCTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564071.1 |
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