RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TEX11 (Homo sapiens)

Ensembl gene IDs: ENSG00000120498

Ensembl transcript IDs: ENST00000344304.3, ENST00000374320.6, ENST00000374333.7, ENST00000395889.6

Found 308 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGAGCCGCAGCCACCAATaGCGCCCTGCTCTCTCCACA +
Preference number: 4 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLSRSHQ*RPALST
Trigger: TGTGGAGAGAGCAGGGCGGCATTGGTGGCTGCGGCT...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCAGCCGCAGCCACCAATaGCGCCCTGCTCTCTCCACA +
Preference number: 4 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSSRSHQ*RPALST
Trigger: TGTGGAGAGAGCAGGGCGGCATTGGTGGCTGCGGCT...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGCGCCCCATCTGGCACTaGGAGGTTAACCAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLRPIWH*EVNQVV
Trigger: CACAACTTGGTTAACCTCTCAGTGCCAGATGGGGCG...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGAGGCAACTCCCACACTaGTTCCAGGAAGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLRQLPH*FQEAFQ
Trigger: CTGGAAAGCTTCCTGGAATCAGTGTGGGAGTTGCCT...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTCCACCAATGCCGCCCTaGTCTCTCCACAACCTCCGT +
Preference number: 4 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCPPMPP*SLHNLR
Trigger: ACGGAGGTTGTGGAGAGAGCAGGGCGGCATTGGTGG...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGCCACCAATGCCGCCCTaGTCTCTCCACAACCTCCGT +
Preference number: 4 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVPPMPP*SLHNLR
Trigger: ACGGAGGTTGTGGAGAGAGCAGGGCGGCATTGGTGG...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGCCCTTGAGCAACTGCTaGCTCTGCTTGGTAAGAAAG +
Preference number: 4 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLPLSNC*LCLVRK
Trigger: CTTTCTTACCAAGCAGAGTCAGCAGTTGCTCAAGGG...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGGAGATGATGAAGACTTaGAGTCATCTGGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLEMMKT*SHLGEP
Trigger: AGGCTCCCCCAGATGACTTCAAGTCTTCATCATCTC...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGCGGTATTCCAGGACTTaGCCATCAGCCAGAGAATCT +
Preference number: 4 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLRYSRT*PSARES
Trigger: AGATTCTCTGGCTGATGGTCAAGTCCTGGAATACCG...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGCAAGCCATGTTCCTCTaGAGCTTGGTGAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLQAMFL*SLVKSR
Trigger: TCTGGACTTCACCAAGCTGCAGAGGAACATGGCTTG...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGACAGGAGGCGGAGGTTaGAGTGAGCCGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVTGGGG*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAACCTCCGCCTCCTGT...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395889.6
CDS-3UTR TCA 90 bp TGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCAGGCAACTCCCACACTaGTTCCAGGAAGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: WQKFKQSASRDNVSSSCGRQLPH*FQEAFQ
Trigger: CTGGAAAGCTTCCTGGAATCAGTGTGGGAGTTGCCT...GCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGCGCCCCATCTGGCACTaGGAGGTTAACCAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMRPIWH*EVNQVV
Trigger: CACAACTTGGTTAACCTCTCAGTGCCAGATGGGGCG...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTCGCCCCATCTGGCACTaGGAGGTTAACCAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSRPIWH*EVNQVV
Trigger: CACAACTTGGTTAACCTCTCAGTGCCAGATGGGGCG...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTCGCCCCATCTGGCACTaGGAGGTTAACCAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSRPIWH*EVNQVV
Trigger: CACAACTTGGTTAACCTCTCAGTGCCAGATGGGGCG...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCCGGTATTCCAGGACTTaGCCATCAGCCAGAGAATCT +
Preference number: 4 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSRYSRT*PSARES
Trigger: AGATTCTCTGGCTGATGGTCAAGTCCTGGAATACCG...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCCAAGCCATGTTCCTCTaGAGCTTGGTGAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSQAMFL*SLVKSR
Trigger: TCTGGACTTCACCAAGCTGCAGAGGAACATGGCTTG...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCCTGGATCTCCTCAAGTaGACGACTCAGGAACATGGT +
Preference number: 4 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSLDLLK*TTQEHG
Trigger: ACCATGTTCCTGAGTCGTGCACTTGAGGAGATCCAG...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCCTGGCCACAGCAGCTTaGAAACATTCATCAGCGATT +
Preference number: 4 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSLATAA*KHSSAI
Trigger: AATCGCTGATGAATGTTTTCAAGCTGCTGTGGCCAG...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTAGGCAACTCCCACACTaGTTCCAGGAAGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCRQLPH*FQEAFQ
Trigger: CTGGAAAGCTTCCTGGAATCAGTGTGGGAGTTGCCT...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTCAGCTTCTGCCACTaGCTCTTTGGCCTTATCAAG +
Preference number: 4 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSFSFCH*LFGLIK
Trigger: CTTGATAAGGCCAAAGAGGCAGTGGCAGAAGCTGAA...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTCCCTTGAGCAACTGCTaGCTCTGCTTGGTAAGAAAG +
Preference number: 4 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSPLSNC*LCLVRK
Trigger: CTTTCTTACCAAGCAGAGTCAGCAGTTGCTCAAGGG...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGAGATGATGAAGACTTaGAGTCATCTGGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVEMMKT*SHLGEP
Trigger: AGGCTCCCCCAGATGACTTCAAGTCTTCATCATCTC...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGGAGATGATGAAGACTTaGAGTCATCTGGGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMEMMKT*SHLGEP
Trigger: AGGCTCCCCCAGATGACTTCAAGTCTTCATCATCTC...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCTCCTCTGCAGCTTGGTaGAGTCCAGATCCATTTCAT +
Preference number: 4 (lower is better)
Translates to: WQKFKQSASRDNVSSSCGSSAAW*SPDPFH
Trigger: ATGAAATGGATCTGGACTTCACCAAGCTGCAGAGGA...GCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGGTTTTTCGAAACCACTaGGCTTCATTAGCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLVFRNH*ASLALD
Trigger: GTCAAGAGCTAATGAAGCTCAGTGGTTTCGAAAAAC...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCAAGGCAACTCCCACACTaGTTCCAGGAAGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSRQLPH*FQEAFQ
Trigger: CTGGAAAGCTTCCTGGAATCAGTGTGGGAGTTGCCT...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGCCTTTTTCAAGGCCTTaGGAGCAATCAAAGGATAGT +
Preference number: 4 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLPFSRP*EQSKDS
Trigger: ACTATCCTTTGATTGCTCTCAAGGCCTTGAAAAAGG...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTCGGTATTCCAGGACTTaGCCATCAGCCAGAGAATCT +
Preference number: 4 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCRYSRT*PSARES
Trigger: AGATTCTCTGGCTGATGGTCAAGTCCTGGAATACCG...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGCTCCCTGTTGATATTTaGTATGTCGCTGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLLPVDI*YVAEES
Trigger: AGACTCTTCAGCGACATAGCAAATATCAACAGGGAG...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTCAAGCCATGTTCCTCTaGAGCTTGGTGAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSQAMFL*SLVKSR
Trigger: TCTGGACTTCACCAAGCTGCAGAGGAACATGGCTTG...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCGGATCTTTGTCACATTaGACAGCCAAGTTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSGSLSH*TAKFQA
Trigger: AGCTTGGAACTTGGCTGTGCAATGTGACAAAGATCC...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGCTGGATCTCCTCAAGTaGACGACTCAGGAACATGGT +
Preference number: 4 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVLDLLK*TTQEHG
Trigger: ACCATGTTCCTGAGTCGTGCACTTGAGGAGATCCAG...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTCTGGATCTCCTCAAGTaGACGACTCAGGAACATGGT +
Preference number: 4 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSLDLLK*TTQEHG
Trigger: ACCATGTTCCTGAGTCGTGCACTTGAGGAGATCCAG...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGCTTCAATCTTCTCCTTaGCAAGAAGTTCTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLLQSSP*QEVLPS
Trigger: GGAAGGAAGAACTTCTTGCCAAGGAGAAGATTGAAG...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGTTCTCTAGAGCAAACTaGGCAGCTAAACTTAGAAGC +
Preference number: 4 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLFSRAN*AAKLRS
Trigger: GCTTCTAAGTTTAGCTGCCCAGTTTGCTCTAGAGAA...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCCACGACTCAGGAACATaGTCTGTTCAAAAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSHDSGT*SVQKLL
Trigger: CAACAGCTTTTGAACAGACCATGTTCCTGAGTCGTG...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATCTGGCCACAGCAGCTTaGAAACATTCATCAGCGATT +
Preference number: 4 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHLATAA*KHSSAI
Trigger: AATCGCTGATGAATGTTTTCAAGCTGCTGTGGCCAG...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTCTGGCCACAGCAGCTTaGAAACATTCATCAGCGATT +
Preference number: 4 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCLATAA*KHSSAI
Trigger: AATCGCTGATGAATGTTTTCAAGCTGCTGTGGCCAG...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGGTAAGAAAGCACTCTaGAGTGGTCACTCTCAACAG +
Preference number: 4 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHGKKAL*SGHSQQ
Trigger: CTGTTGAGAGTGACCACTTCAGAGTGCTTTCTTACC...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGTAAGAAAGCACTCTaGAGTGGTCACTCTCAACAG +
Preference number: 4 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCGKKAL*SGHSQQ
Trigger: CTGTTGAGAGTGACCACTTCAGAGTGCTTTCTTACC...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGGTAAGAAAGCACTCTaGAGTGGTCACTCTCAACAG +
Preference number: 4 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVGKKAL*SGHSQQ
Trigger: CTGTTGAGAGTGACCACTTCAGAGTGCTTTCTTACC...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCACCCTTGAGCAACTGCTaGCTCTGCTTGGTAAGAAAG +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSPLSNC*LCLVRK
Trigger: CTTTCTTACCAAGCAGAGTCAGCAGTTGCTCAAGGG...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGGATGTAGTATTTCCATaGCAGCTTCAAGGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLDVVFP*QLQGVL
Trigger: AAGAACTCCTTGAAGCTGTCATGGAAATACTACATC...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCCTCTGCAGCTTGGTaGAGTCCAGATCCATTTCAT +
Preference number: 4 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSSSAAW*SPDPFH
Trigger: ATGAAATGGATCTGGACTTCACCAAGCTGCAGAGGA...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCCTCTGCAGCTTGGTaGAGTCCAGATCCATTTCAT +
Preference number: 4 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSSSAAW*SPDPFH
Trigger: ATGAAATGGATCTGGACTTCACCAAGCTGCAGAGGA...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGGTTTTAGTTTCTAAATaGGGCAACTCCCACACTGAT +
Preference number: 4 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLVLVSK*GNSHTD
Trigger: ATCAGTGTGGGAGTTGCCTCATTTAGAAACTAAAAC...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCCCTTTTTCAAGGCCTTaGGAGCAATCAAAGGATAGT +
Preference number: 4 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSPFSRP*EQSKDS
Trigger: ACTATCCTTTGATTGCTCTCAAGGCCTTGAAAAAGG...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGCAGTACACACATAGATaGTCTTTGAAAATCCCCTTG +
Preference number: 4 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLQYTHR*SLKIPL
Trigger: CAAGGGGATTTTCAAAGAGCATCTATGTGTGTACTG...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCACAAGCCATGTTCCTCTaGAGCTTGGTGAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSQAMFL*SLVKSR
Trigger: TCTGGACTTCACCAAGCTGCAGAGGAACATGGCTTG...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGTTCAGCTTCTGCCACTaGCTCTTTGGCCTTATCAAG +
Preference number: 4 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMFSFCH*LFGLIK
Trigger: CTTGATAAGGCCAAAGAGGCAGTGGCAGAAGCTGAA...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTTCAGCTTCTGCCACTaGCTCTTTGGCCTTATCAAG +
Preference number: 4 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSFSFCH*LFGLIK
Trigger: CTTGATAAGGCCAAAGAGGCAGTGGCAGAAGCTGAA...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTTTCAGCTTCTGCCACTaGCTCTTTGGCCTTATCAAG +
Preference number: 4 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCFSFCH*LFGLIK
Trigger: CTTGATAAGGCCAAAGAGGCAGTGGCAGAAGCTGAA...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp TGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCGGATCTTTGTCACATTaGACAGCCAAGTTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: WQKFKQSASRDNVSSSCGGSLSH*TAKFQA
Trigger: AGCTTGGAACTTGGCTGTGCAATGTGACAAAGATCC...GCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCACTGGATCTCCTCAAGTaGACGACTCAGGAACATGGT +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSLDLLK*TTQEHG
Trigger: ACCATGTTCCTGAGTCGTGCACTTGAGGAGATCCAG...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCCCACTTTTCAGCAGATaGATACTTGCTCCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSPLFSR*ILAPAK
Trigger: TTTAGCAGGAGCAAGTATGCATCTGCTGAAAAGTGG...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGCCTAATCTGACTTaGTCCAGTAGCCATGTTCAT +
Preference number: 4 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSLPNLT*SSSHVH
Trigger: ATGAACATGGCTACTGGAGCAAGTCAGATTAGGCAA...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGTTTAGCCAGCATTTCTaGCCCAGTAGATTTCTTATC +
Preference number: 4 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLFSQHF*PSRFLI
Trigger: GATAAGAAATCTACTGGGCCAGAAATGCTGGCTAAA...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTCTGCCACTGCCTCTTTaGCCTTATCAAGTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSLPLPL*PYQVVA
Trigger: TGCAACAACTTGATAAGGCCAAAGAGGCAGTGGCAG...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGCTGCCACTGCCTCTTTaGCCTTATCAAGTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMLPLPL*PYQVVA
Trigger: TGCAACAACTTGATAAGGCCAAAGAGGCAGTGGCAG...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTCTGCCACTGCCTCTTTaGCCTTATCAAGTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSLPLPL*PYQVVA
Trigger: TGCAACAACTTGATAAGGCCAAAGAGGCAGTGGCAG...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp TGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCGAGAATCTCCATTTCTaGGTAGTCTTTAGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: WQKFKQSASRDNVSSSCGENLHF*VVFSAA
Trigger: AGCCGCACTAAAGACTACCCAGAAATGGAGATTCTC...GCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTTGAAGGAGGTAAGGTaGTTAAGGAAACGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSLKEVR*LRKRKA
Trigger: GGCCTTGCGTTTCCTTAACCACCTTACCTCCTTCAA...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATTTGAAGGAGGTAAGGTaGTTAAGGAAACGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHLKEVR*LRKRKA
Trigger: GGCCTTGCGTTTCCTTAACCACCTTACCTCCTTCAA...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGATCATAATCAGTCGTTaGATACTTTGTTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLIIISR*ILCSEA
Trigger: TGCCTCAGAACAAAGTATTCAACGACTGATTATGAT...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCGATGTAGTATTTCCATaGCAGCTTCAAGGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSDVVFP*QLQGVL
Trigger: AAGAACTCCTTGAAGCTGTCATGGAAATACTACATC...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGATAATCGTCAGGAAATaGAACCCAACAGATTCTCTT +
Preference number: 4 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLIIVRK*NPTDSL
Trigger: AAGAGAATCTGTTGGGTTTCATTTCCTGACGATTAT...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCAATGCTTCCACAAGCTaGCTATACAGCATATTCATC +
Preference number: 4 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSNASTS*LYSIFI
Trigger: GATGAATATGCTGTATAGTCAGCTTGTGGAAGCATT...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGGTTTATTCAACAACATaGAAACAGGGTCTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLVYSTT*KQGLSK
Trigger: TTTGCTCAGACCCTGTTTTCATGTTGTTGAATAAAC...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp TGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCAATTTGACGTATAATTaGTCCAGACTGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: WQKFKQSASRDNVSSSCGNLTYN*SRLATA
Trigger: TGCTGTGGCCAGTCTGGAGCAATTATACGTCAAATT...GCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGGGATCTTTGTCACATTaGACAGCCAAGTTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMGSLSH*TAKFQA
Trigger: AGCTTGGAACTTGGCTGTGCAATGTGACAAAGATCC...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp TGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCTTGCCTAATCTGACTTaGTCCAGTAGCCATGTTCAT +
Preference number: 4 (lower is better)
Translates to: WQKFKQSASRDNVSSSCGLPNLT*SSSHVH
Trigger: ATGAACATGGCTACTGGAGCAAGTCAGATTAGGCAA...GCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTATAATTGCTCCAGACTaGCCACAGCAGCTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCIIAPD*PQQLEN
Trigger: GTTTTCAAGCTGCTGTGGCCAGTCTGGAGCAATTAT...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGATAATTGCTCCAGACTaGCCACAGCAGCTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMIIAPD*PQQLEN
Trigger: GTTTTCAAGCTGCTGTGGCCAGTCTGGAGCAATTAT...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGAGACTTGAAGTCATCTaGGGGAGCCTCATCAACATA +
Preference number: 4 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVRLEVI*GSLINI
Trigger: TATGTTGATGAGGCTCCCCCAGATGACTTCAAGTCT...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTGTACCTCAAAACTACTaGCAGCTTGTCTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSVPQNY*QLVSTE
Trigger: TTCTGTGGAGACAAGCTGCCAGTAGTTTTGAGGTAC...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGGTACCTCAAAACTACTaGCAGCTTGTCTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMVPQNY*QLVSTE
Trigger: TTCTGTGGAGACAAGCTGCCAGTAGTTTTGAGGTAC...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGTACCTCAAAACTACTaGCAGCTTGTCTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHVPQNY*QLVSTE
Trigger: TTCTGTGGAGACAAGCTGCCAGTAGTTTTGAGGTAC...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGCACGACTCAGGAACATaGTCTGTTCAAAAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVHDSGT*SVQKLL
Trigger: CAACAGCTTTTGAACAGACCATGTTCCTGAGTCGTG...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATCACGACTCAGGAACATaGTCTGTTCAAAAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHHDSGT*SVQKLL
Trigger: CAACAGCTTTTGAACAGACCATGTTCCTGAGTCGTG...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTATGTCATTGCATGTCTaGATCTCCTCAAGTGCACGA +
Preference number: 4 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSMSLHV*ISSSAR
Trigger: TCGTGCACTTGAGGAGATCCAGACATGCAATGACAT...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTATGTCATTGCATGTCTaGATCTCCTCAAGTGCACGA +
Preference number: 4 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCMSLHV*ISSSAR
Trigger: TCGTGCACTTGAGGAGATCCAGACATGCAATGACAT...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp TGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCTTAGTGCGGCTAATGTaGCTCAGAGCATCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: WQKFKQSASRDNVSSSCGLVRLM*LRASSK
Trigger: TTTTGAAGATGCTCTGAGCCACATTAGCCGCACTAA...GCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTGAGAATCTCCATTTCTaGGTAGTCTTTAGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSENLHF*VVFSAA
Trigger: AGCCGCACTAAAGACTACCCAGAAATGGAGATTCTC...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTGAGAATCTCCATTTCTaGGTAGTCTTTAGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSENLHF*VVFSAA
Trigger: AGCCGCACTAAAGACTACCCAGAAATGGAGATTCTC...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATTGAAGGAGGTAAGGTaGTTAAGGAAACGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSLKEVR*LRKRKA
Trigger: GGCCTTGCGTTTCCTTAACCACCTTACCTCCTTCAA...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTGTCTTCCTGTTTGGTaGGCTAAAAAGATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSCLPVW*AKKISS
Trigger: TGAAGAAATCTTTTTAGCTCACCAAACAGGAAGACA...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTGTTTTTCGAAACCACTaGGCTTCATTAGCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSVFRNH*ASLALD
Trigger: GTCAAGAGCTAATGAAGCTCAGTGGTTTCGAAAAAC...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGTTTTTCGAAACCACTaGGCTTCATTAGCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVVFRNH*ASLALD
Trigger: GTCAAGAGCTAATGAAGCTCAGTGGTTTCGAAAAAC...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGCCTTTTTCAAGGCCTTaGGAGCAATCAAAGGATAGT +
Preference number: 4 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMPFSRP*EQSKDS
Trigger: ACTATCCTTTGATTGCTCTCAAGGCCTTGAAAAAGG...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTACTTCAACTTGGTaGCTCCAATCATCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSCTSTW*LQSSLW
Trigger: CCAGAGAGATGATTGGAGTCACCAAGTTGAAGTACA...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374320.6
CDS-3UTR GCA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATCTCCCTGTTGATATTTaGTATGTCGCTGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHLPVDI*YVAEES
Trigger: AGACTCTTCAGCGACATAGCAAATATCAACAGGGAG...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGAATTTGACGTATAATTaGTCCAGACTGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVNLTYN*SRLATA
Trigger: TGCTGTGGCCAGTCTGGAGCAATTATACGTCAAATT...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAATTTGACGTATAATTaGTCCAGACTGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMNLTYN*SRLATA
Trigger: TGCTGTGGCCAGTCTGGAGCAATTATACGTCAAATT...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGAAAGTAATTATTGCCTaGAAAGCTCTTTCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLKVIIA*KALSEL
Trigger: CAACTCTGAAAGAGCTTTGCAGGCAATAATTACTTT...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCAGGATCTTTGTCACATTaGACAGCCAAGTTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSGSLSH*TAKFQA
Trigger: AGCTTGGAACTTGGCTGTGCAATGTGACAAAGATCC...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTGAAGCTTTTCTCCCTTaGTCTAGATCAACTGCAACT +
Preference number: 4 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSEAFLP*SRSTAT
Trigger: AGTTGCAGTTGATCTAGAGCAAGGGAGAAAAGCTTC...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGAAGCTTTTCTCCCTTaGTCTAGATCAACTGCAACT +
Preference number: 4 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCEAFLP*SRSTAT
Trigger: AGTTGCAGTTGATCTAGAGCAAGGGAGAAAAGCTTC...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTGAAGCTTTTCTCCCTTaGTCTAGATCAACTGCAACT +
Preference number: 4 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSEAFLP*SRSTAT
Trigger: AGTTGCAGTTGATCTAGAGCAAGGGAGAAAAGCTTC...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGCCACTTTTCAGCAGATaGATACTTGCTCCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVPLFSR*ILAPAK
Trigger: TTTAGCAGGAGCAAGTATGCATCTGCTGAAAAGTGG...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTCCACTTTTCAGCAGATaGATACTTGCTCCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSPLFSR*ILAPAK
Trigger: TTTAGCAGGAGCAAGTATGCATCTGCTGAAAAGTGG...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGTTGCCTAATCTGACTTaGTCCAGTAGCCATGTTCAT +
Preference number: 4 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMLPNLT*SSSHVH
Trigger: ATGAACATGGCTACTGGAGCAAGTCAGATTAGGCAA...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTTGCCTAATCTGACTTaGTCCAGTAGCCATGTTCAT +
Preference number: 4 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSLPNLT*SSSHVH
Trigger: ATGAACATGGCTACTGGAGCAAGTCAGATTAGGCAA...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGGAAAGCACTCTGAAGTaGTCACTCTCAACAGTAATC +
Preference number: 4 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMESTLK*SLSTVI
Trigger: GATTACTGTTGAGAGTGACCACTTCAGAGTGCTTTC...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTCTTCAATCTTCTCCTTaGCAAGAAGTTCTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSLQSSP*QEVLPS
Trigger: GGAAGGAAGAACTTCTTGCCAAGGAGAAGATTGAAG...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCAGTACCTCAAAACTACTaGCAGCTTGTCTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSVPQNY*QLVSTE
Trigger: TTCTGTGGAGACAAGCTGCCAGTAGTTTTGAGGTAC...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTTCTCTAGAGCAAACTaGGCAGCTAAACTTAGAAGC +
Preference number: 4 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSFSRAN*AAKLRS
Trigger: GCTTCTAAGTTTAGCTGCCCAGTTTGCTCTAGAGAA...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATTTCTCTAGAGCAAACTaGGCAGCTAAACTTAGAAGC +
Preference number: 4 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHFSRAN*AAKLRS
Trigger: GCTTCTAAGTTTAGCTGCCCAGTTTGCTCTAGAGAA...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTCTCTCTCATCATCACTaGATCTTTGTCACATTGCAC +
Preference number: 4 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSLSHHH*IFVTLH
Trigger: GTGCAATGTGACAAAGATCCAGTGATGATGAGAGAG...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATCTCTCTCATCATCACTaGATCTTTGTCACATTGCAC +
Preference number: 4 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHLSHHH*IFVTLH
Trigger: GTGCAATGTGACAAAGATCCAGTGATGATGAGAGAG...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTGTTTCAGGAAATTATaGATGTCATTGCATGTCTGG +
Preference number: 4 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSCFRKL*MSLHVW
Trigger: CCAGACATGCAATGACATCCATAATTTCCTGAAACA...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCATGTTCATGAAAAACTaGGCCCTTGTTGTTACTCAA +
Preference number: 4 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSMFMKN*ALVVTQ
Trigger: TTGAGTAACAACAAGGGCCCAGTTTTTCATGAACAT...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCTCTGGTATGTTAGGTaGATTATCATTTGTAACCAG +
Preference number: 4 (lower is better)
Translates to: WQKFKQSASRDNVSSSCGLWYVR*IIICNQ
Trigger: CTGGTTACAAATGATAATTCACCTAACATACCAGAG...GCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGCCATTTCTTCAATCTaGATGTCTGTTATTTCAGCC +
Preference number: 4 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHAISSI*MSVISA
Trigger: GGCTGAAATAACAGACATTCAGATTGAAGAAATGGC...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTACAGATTCTCTTTCATaGTCCATCAGCAGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSTDSLS*SISSLA
Trigger: TGCTAAACTGCTGATGGATCATGAAAGAGAATCTGT...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGACAGATTCTCTTTCATaGTCCATCAGCAGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVTDSLS*SISSLA
Trigger: TGCTAAACTGCTGATGGATCATGAAAGAGAATCTGT...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGACAGATTCTCTTTCATaGTCCATCAGCAGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMTDSLS*SISSLA
Trigger: TGCTAAACTGCTGATGGATCATGAAAGAGAATCTGT...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCTGTCTTCCTGTTTGGTaGGCTAAAAAGATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: WQKFKQSASRDNVSSSCGCLPVW*AKKISS
Trigger: TGAAGAAATCTTTTTAGCTCACCAAACAGGAAGACA...GCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCTGGTCTTCTGAATGTTaGGCTAAATATTCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: WQKFKQSASRDNVSSSCGWSSEC*AKYSKA
Trigger: AGCTTTGGAATATTTAGCTCAACATTCAGAAGACCA...GCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGTTTTAGTTTCTAAATaGGGCAACTCCCACACTGAT +
Preference number: 4 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCVLVSK*GNSHTD
Trigger: ATCAGTGTGGGAGTTGCCTCATTTAGAAACTAAAAC...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGGTTTTAGTTTCTAAATaGGGCAACTCCCACACTGAT +
Preference number: 4 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMVLVSK*GNSHTD
Trigger: ATCAGTGTGGGAGTTGCCTCATTTAGAAACTAAAAC...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGTTTTAGTTTCTAAATaGGGCAACTCCCACACTGAT +
Preference number: 4 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVVLVSK*GNSHTD
Trigger: ATCAGTGTGGGAGTTGCCTCATTTAGAAACTAAAAC...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCACCTTTTTCAAGGCCTTaGGAGCAATCAAAGGATAGT +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSPFSRP*EQSKDS
Trigger: ACTATCCTTTGATTGCTCTCAAGGCCTTGAAAAAGG...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGAATGCTTCCACAAGCTaGCTATACAGCATATTCATC +
Preference number: 4 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVNASTS*LYSIFI
Trigger: GATGAATATGCTGTATAGTCAGCTTGTGGAAGCATT...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATAATGCTTCCACAAGCTaGCTATACAGCATATTCATC +
Preference number: 4 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHNASTS*LYSIFI
Trigger: GATGAATATGCTGTATAGTCAGCTTGTGGAAGCATT...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCGTTTATTCAACAACATaGAAACAGGGTCTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: WQKFKQSASRDNVSSSCGVYSTT*KQGLSK
Trigger: TTTGCTCAGACCCTGTTTTCATGTTGTTGAATAAAC...GCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATCAGTACACACATAGATaGTCTTTGAAAATCCCCTTG +
Preference number: 4 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHQYTHR*SLKIPL
Trigger: CAAGGGGATTTTCAAAGAGCATCTATGTGTGTACTG...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGCAGTACACACATAGATaGTCTTTGAAAATCCCCTTG +
Preference number: 4 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMQYTHR*SLKIPL
Trigger: CAAGGGGATTTTCAAAGAGCATCTATGTGTGTACTG...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCAAAGTAATTATTGCCTaGAAAGCTCTTTCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSKVIIA*KALSEL
Trigger: CAACTCTGAAAGAGCTTTGCAGGCAATAATTACTTT...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTGCAGGCTTTTCCATTaGTATTATTGCAATTGTTTC +
Preference number: 4 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSCRLFH*YYCNCF
Trigger: GAAACAATTGCAATAATAGCAATGGAAAAGCCTGCA...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCACCACTTTTCAGCAGATaGATACTTGCTCCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSPLFSR*ILAPAK
Trigger: TTTAGCAGGAGCAAGTATGCATCTGCTGAAAAGTGG...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCAGAAAGCACTCTGAAGTaGTCACTCTCAACAGTAATC +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSESTLK*SLSTVI
Trigger: GATTACTGTTGAGAGTGACCACTTCAGAGTGCTTTC...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATTTTAGCCAGCATTTCTaGCCCAGTAGATTTCTTATC +
Preference number: 4 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHFSQHF*PSRFLI
Trigger: GATAAGAAATCTACTGGGCCAGAAATGCTGGCTAAA...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCAATCCAAATAATTCGTaGCTAATAGCCGTAGAACTT +
Preference number: 4 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSNPNNS*LIAVEL
Trigger: AAGTTCTACGGCTATTAGCCACGAATTATTTGGATT...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCAAAAGCATGTCAGTATaGAGTATCAGAACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSKSMSV*SIRTFP
Trigger: TGGAAAAGTTCTGATACTCCATACTGACATGCTTTT...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCACTCTCTCATCATCACTaGATCTTTGTCACATTGCAC +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSLSHHH*IFVTLH
Trigger: GTGCAATGTGACAAAGATCCAGTGATGATGAGAGAG...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATTAGTGCGGCTAATGTaGCTCAGAGCATCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSLVRLM*LRASSK
Trigger: TTTTGAAGATGCTCTGAGCCACATTAGCCGCACTAA...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp TGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCATGTTCATGAAAAACTaGGCCCTTGTTGTTACTCAA +
Preference number: 4 (lower is better)
Translates to: WQKFKQSASRDNVSSSCGMFMKN*ALVVTQ
Trigger: TTGAGTAACAACAAGGGCCCAGTTTTTCATGAACAT...GCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTCTCTGGTATGTTAGGTaGATTATCATTTGTAACCAG +
Preference number: 4 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSLWYVR*IIICNQ
Trigger: CTGGTTACAAATGATAATTCACCTAACATACCAGAG...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGCTCTGGTATGTTAGGTaGATTATCATTTGTAACCAG +
Preference number: 4 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVLWYVR*IIICNQ
Trigger: CTGGTTACAAATGATAATTCACCTAACATACCAGAG...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCAGCCATTTCTTCAATCTaGATGTCTGTTATTTCAGCC +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSAISSI*MSVISA
Trigger: GGCTGAAATAACAGACATTCAGATTGAAGAAATGGC...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTATCATAATCAGTCGTTaGATACTTTGTTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCIIISR*ILCSEA
Trigger: TGCCTCAGAACAAAGTATTCAACGACTGATTATGAT...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTATCATAATCAGTCGTTaGATACTTTGTTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSIIISR*ILCSEA
Trigger: TGCCTCAGAACAAAGTATTCAACGACTGATTATGAT...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCAGGGGAGCTCCTTTaGATTAATTTGACGTATAAT +
Preference number: 4 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSSGELL*INLTYN
Trigger: ATTATACGTCAAATTAATTCAAAGGAGCTCCCCTGA...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCAGGGGAGCTCCTTTaGATTAATTTGACGTATAAT +
Preference number: 4 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSSGELL*INLTYN
Trigger: ATTATACGTCAAATTAATTCAAAGGAGCTCCCCTGA...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGTCAGGGGAGCTCCTTTaGATTAATTTGACGTATAAT +
Preference number: 4 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMSGELL*INLTYN
Trigger: ATTATACGTCAAATTAATTCAAAGGAGCTCCCCTGA...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCAACAGATTCTCTTTCATaGTCCATCAGCAGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSTDSLS*SISSLA
Trigger: TGCTAAACTGCTGATGGATCATGAAAGAGAATCTGT...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGATAATCGTCAGGAAATaGAACCCAACAGATTCTCTT +
Preference number: 4 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMIIVRK*NPTDSL
Trigger: AAGAGAATCTGTTGGGTTTCATTTCCTGACGATTAT...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGTGTCTTCCTGTTTGGTaGGCTAAAAAGATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMCLPVW*AKKISS
Trigger: TGAAGAAATCTTTTTAGCTCACCAAACAGGAAGACA...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATTGTCTTCCTGTTTGGTaGGCTAAAAAGATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHCLPVW*AKKISS
Trigger: TGAAGAAATCTTTTTAGCTCACCAAACAGGAAGACA...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATTGGTCTTCTGAATGTTaGGCTAAATATTCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHWSSEC*AKYSKA
Trigger: AGCTTTGGAATATTTAGCTCAACATTCAGAAGACCA...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTGGTCTTCTGAATGTTaGGCTAAATATTCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSWSSEC*AKYSKA
Trigger: AGCTTTGGAATATTTAGCTCAACATTCAGAAGACCA...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR TCA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGTTTATTCAACAACATaGAAACAGGGTCTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHVYSTT*KQGLSK
Trigger: TTTGCTCAGACCCTGTTTTCATGTTGTTGAATAAAC...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTAATTATGGATGTCATTaGATGTCTGGATCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCNYGCH*MSGSPQ
Trigger: TTGAGGAGATCCAGACATGCAATGACATCCATAATT...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGAATTATGGATGTCATTaGATGTCTGGATCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVNYGCH*MSGSPQ
Trigger: TTGAGGAGATCCAGACATGCAATGACATCCATAATT...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGAATCAAAGGATAGTGTaGAGGCTTTTCCATTGCTAT +
Preference number: 4 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVNQRIV*RLFHCY
Trigger: ATAGCAATGGAAAAGCCTGCACACTATCCTTTGATT...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAATCAAAGGATAGTGTaGAGGCTTTTCCATTGCTAT +
Preference number: 4 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMNQRIV*RLFHCY
Trigger: ATAGCAATGGAAAAGCCTGCACACTATCCTTTGATT...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTAATCAAAGGATAGTGTaGAGGCTTTTCCATTGCTAT +
Preference number: 4 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSNQRIV*RLFHCY
Trigger: ATAGCAATGGAAAAGCCTGCACACTATCCTTTGATT...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGCTTGTTGTTACTCAATaGTTCCACAAGCTGACTATA +
Preference number: 4 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMLVVTQ*FHKLTI
Trigger: TATAGTCAGCTTGTGGAAGCATTGAGTAACAACAAG...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTCTTGTTGTTACTCAATaGTTCCACAAGCTGACTATA +
Preference number: 4 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSLVVTQ*FHKLTI
Trigger: TATAGTCAGCTTGTGGAAGCATTGAGTAACAACAAG...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTCTTGTTGTTACTCAATaGTTCCACAAGCTGACTATA +
Preference number: 4 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCLVVTQ*FHKLTI
Trigger: TATAGTCAGCTTGTGGAAGCATTGAGTAACAACAAG...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATTTAGCCAGCATTTCTaGCCCAGTAGATTTCTTATC +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSFSQHF*PSRFLI
Trigger: GATAAGAAATCTACTGGGCCAGAAATGCTGGCTAAA...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTGTTTCAGGAAATTATaGATGTCATTGCATGTCTGG +
Preference number: 4 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSCFRKL*MSLHVW
Trigger: CCAGACATGCAATGACATCCATAATTTCCTGAAACA...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGTGTTTCAGGAAATTATaGATGTCATTGCATGTCTGG +
Preference number: 4 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVCFRKL*MSLHVW
Trigger: CCAGACATGCAATGACATCCATAATTTCCTGAAACA...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGATGTTCATGAAAAACTaGGCCCTTGTTGTTACTCAA +
Preference number: 4 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVMFMKN*ALVVTQ
Trigger: TTGAGTAACAACAAGGGCCCAGTTTTTCATGAACAT...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGAAAGTAATTATTGCCTaGAAAGCTCTTTCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVKVIIA*KALSEL
Trigger: CAACTCTGAAAGAGCTTTGCAGGCAATAATTACTTT...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATAAAGTAATTATTGCCTaGAAAGCTCTTTCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHKVIIA*KALSEL
Trigger: CAACTCTGAAAGAGCTTTGCAGGCAATAATTACTTT...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGTTCCAAAGCTTTTTCTaGCACAATTTGTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMFQSFF*HNLLSI
Trigger: AATGGACAACAAATTGTGGCAGAAAAAGCTTTGGAA...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGTTCCAAAGCTTTTTCTaGCACAATTTGTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVFQSFF*HNLLSI
Trigger: AATGGACAACAAATTGTGGCAGAAAAAGCTTTGGAA...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATTTCCAAAGCTTTTTCTaGCACAATTTGTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHFQSFF*HNLLSI
Trigger: AATGGACAACAAATTGTGGCAGAAAAAGCTTTGGAA...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCAAATTATGGATGTCATTaGATGTCTGGATCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSNYGCH*MSGSPQ
Trigger: TTGAGGAGATCCAGACATGCAATGACATCCATAATT...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATTGCAGGCTTTTCCATTaGTATTATTGCAATTGTTTC +
Preference number: 4 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHCRLFH*YYCNCF
Trigger: GAAACAATTGCAATAATAGCAATGGAAAAGCCTGCA...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTGCAGGCTTTTCCATTaGTATTATTGCAATTGTTTC +
Preference number: 4 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSCRLFH*YYCNCF
Trigger: GAAACAATTGCAATAATAGCAATGGAAAAGCCTGCA...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCAAATCAAAGGATAGTGTaGAGGCTTTTCCATTGCTAT +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSNQRIV*RLFHCY
Trigger: ATAGCAATGGAAAAGCCTGCACACTATCCTTTGATT...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTAGGTTAACCAAGTTGTaGATACATTTGCTGTATTGT +
Preference number: 4 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCRLTKL*IHLLYC
Trigger: ACAATACAGCAAATGTATGCACAACTTGGTTAACCT...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGGTTAACCAAGTTGTaGATACATTTGCTGTATTGT +
Preference number: 4 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMRLTKL*IHLLYC
Trigger: ACAATACAGCAAATGTATGCACAACTTGGTTAACCT...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTAATCCAAATAATTCGTaGCTAATAGCCGTAGAACTT +
Preference number: 4 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSNPNNS*LIAVEL
Trigger: AAGTTCTACGGCTATTAGCCACGAATTATTTGGATT...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTAATCCAAATAATTCGTaGCTAATAGCCGTAGAACTT +
Preference number: 4 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSNPNNS*LIAVEL
Trigger: AAGTTCTACGGCTATTAGCCACGAATTATTTGGATT...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATAAAAGCATGTCAGTATaGAGTATCAGAACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHKSMSV*SIRTFP
Trigger: TGGAAAAGTTCTGATACTCCATACTGACATGCTTTT...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTTTCAGGAAATTATaGATGTCATTGCATGTCTGG +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSCFRKL*MSLHVW
Trigger: CCAGACATGCAATGACATCCATAATTTCCTGAAACA...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATTCCAAAGCTTTTTCTaGCACAATTTGTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSFQSFF*HNLLSI
Trigger: AATGGACAACAAATTGTGGCAGAAAAAGCTTTGGAA...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR GCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCAAGGTTAACCAAGTTGTaGATACATTTGCTGTATTGT +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSRLTKL*IHLLYC
Trigger: ACAATACAGCAAATGTATGCACAACTTGGTTAACCT...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CCA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCAAAAAGCATGTCAGTATaGAGTATCAGAACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSKSMSV*SIRTFP
Trigger: TGGAAAAGTTCTGATACTCCATACTGACATGCTTTT...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS GCA 90 bp GTGGTTAAGGAAACGCAAGGCCAGGCCACACCACTTTTCAGCAGATaGATACTTGCTCCTGCTAAACATAAGTACTCCGGTATTCCAGGA +
Preference number: 5 (lower is better)
Translates to: VVKETQGQATPLFSR*ILAPAKHKYSGIPG
Trigger: TCCTGGAATACCGGAGTACTTATGTTTAGCAGGAGCAAGTATGCATCTGCTGAAAAGTGGTGTGGCCTGGCCTTGCGTTTCCTTAACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGCCGGTATTCCAGGACTaGACCATCAGCCAGAGAATC +
Preference number: 5 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLPVFQD*TISQRI
Trigger: GATTCTCTGGCTGATGGTCAAGTCCTGGAATACCGG...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGCATGTGGCCATGAGCTaGCCTAATCTGACTTGCTCC +
Preference number: 5 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLHVAMS*PNLTCS
Trigger: GGAGCAAGTCAGATTAGGCAAGCTCATGGCCACATG...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS TCA 90 bp ACAGTAATCTTCTCCATGGTCAAGTCAGCCTCAGGGGAGCTCCTTTaGATTAATTTGACGTATAATTGCTCCAGACTGGCCACAGCAGCT +
Preference number: 5 (lower is better)
Translates to: TVIFSMVKSASGELL*INLTYNCSRLATAA
Trigger: AGCTGCTGTGGCCAGTCTGGAGCAATTATACGTCAAATTAATTCAAAGGAGCTCCCCTGAGGCTGACTTGACCATGGAGAAGATTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGAGAGATGATGAAGACTaGAAGTCATCTGGGGGAGCC +
Preference number: 5 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLRDDED*KSSGGA
Trigger: GGCTCCCCCAGATGACTTCAAGTCTTCATCATCTCT...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCCCGGTATTCCAGGACTaGACCATCAGCCAGAGAATC +
Preference number: 5 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSPVFQD*TISQRI
Trigger: GATTCTCTGGCTGATGGTCAAGTCCTGGAATACCGG...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGTGGATCTTTGTCACATaGCACAGCCAAGTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLWIFVT*HSQVPS
Trigger: GCTTGGAACTTGGCTGTGCAATGTGACAAAGATCCA...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGTGGCCATGAGCTaGCCTAATCTGACTTGCTCC +
Preference number: 5 (lower is better)
Translates to: WQKFKQSASRDNVSSSCGHVAMS*PNLTCS
Trigger: GGAGCAAGTCAGATTAGGCAAGCTCATGGCCACATG...GCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS GCA 90 bp CATTTGAGAAGGTCCCTGTTTGTTTCAGGAAATTATGGATGTCATTaGATGTCTGGATCTCCTCAAGTGCACGACTCAGGAACATGGTCT +
Preference number: 5 (lower is better)
Translates to: HLRRSLFVSGNYGCH*MSGSPQVHDSGTWS
Trigger: AGACCATGTTCCTGAGTCGTGCACTTGAGGAGATCCAGACATGCAATGACATCCATAATTTCCTGAAACAAACAGGGACCTTCTCAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS GCA 90 bp ACAATGTATCTTCTTCATGTGGCCATGAGCTTGCCTAATCTGACTTaGTCCAGTAGCCATGTTCATGAAAAACTGGGCCCTTGTTGTTAC +
Preference number: 5 (lower is better)
Translates to: TMYLLHVAMSLPNLT*SSSHVHEKLGPCCY
Trigger: GTAACAACAAGGGCCCAGTTTTTCATGAACATGGCTACTGGAGCAAGTCAGATTAGGCAAGCTCATGGCCACATGAAGAAGATACATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCTCTGCCACTGCCTCTTaGGCCTTATCAAGTTGTTGC +
Preference number: 5 (lower is better)
Translates to: WQKFKQSASRDNVSSSCGSATAS*ALSSCC
Trigger: GCAACAACTTGATAAGGCCAAAGAGGCAGTGGCAGA...GCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGATCATCACTGGATCTTaGTCACATTGCACAGCCAAG +
Preference number: 5 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLIITGS*SHCTAK
Trigger: CTTGGCTGTGCAATGTGACAAAGATCCAGTGATGAT...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTCCGGTATTCCAGGACTaGACCATCAGCCAGAGAATC +
Preference number: 5 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSPVFQD*TISQRI
Trigger: GATTCTCTGGCTGATGGTCAAGTCCTGGAATACCGG...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGAAAACTGGGCCCTTGTaGTTACTCAATGCTTCCACA +
Preference number: 5 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLKTGPL*LLNAST
Trigger: TGTGGAAGCATTGAGTAACAACAAGGGCCCAGTTTT...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATCATGTGGCCATGAGCTaGCCTAATCTGACTTGCTCC +
Preference number: 5 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHHVAMS*PNLTCS
Trigger: GGAGCAAGTCAGATTAGGCAAGCTCATGGCCACATG...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGCATGTGGCCATGAGCTaGCCTAATCTGACTTGCTCC +
Preference number: 5 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMHVAMS*PNLTCS
Trigger: GGAGCAAGTCAGATTAGGCAAGCTCATGGCCACATG...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTAGAGATGATGAAGACTaGAAGTCATCTGGGGGAGCC +
Preference number: 5 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCRDDED*KSSGGA
Trigger: GGCTCCCCCAGATGACTTCAAGTCTTCATCATCTCT...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGCCCAATATCATAGCTTaGGCTAAGCCAGAAAGAACT +
Preference number: 5 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLPNIIA*AKPERT
Trigger: AGTTCTTTCTGGCTTAGCCAAAGCTATGATATTGGG...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGTCTTCAATCTTCTCCTaGGCAAGAAGTTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLSSIFS*ARSSSF
Trigger: GAAGGAAGAACTTCTTGCCAAGGAGAAGATTGAAGA...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGTGTGTAACCAGTTCATaGATTCTGCTGTCAGTTGTC +
Preference number: 5 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLCVTSS*ILLSVV
Trigger: GACAACTGACAGCAGAATCAATGAACTGGTTACACA...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGGGCATCAGTGTAATTTaGTACCTCAAAACTACTGGC +
Preference number: 5 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLGISVI*YLKTTG
Trigger: GCCAGTAGTTTTGAGGTACAAAATTACACTGATGCC...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGGGCCTTATCAAGTTGTaGCAAATTCAGGTAACAGCA +
Preference number: 5 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLGLIKL*QIQVTA
Trigger: TGCTGTTACCTGAATTTGCAACAACTTGATAAGGCC...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTTCTGCCACTGCCTCTTaGGCCTTATCAAGTTGTTGC +
Preference number: 5 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCSATAS*ALSSCC
Trigger: GCAACAACTTGATAAGGCCAAAGAGGCAGTGGCAGA...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATTCTGCCACTGCCTCTTaGGCCTTATCAAGTTGTTGC +
Preference number: 5 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHSATAS*ALSSCC
Trigger: GCAACAACTTGATAAGGCCAAAGAGGCAGTGGCAGA...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCACCGGTATTCCAGGACTaGACCATCAGCCAGAGAATC +
Preference number: 5 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSPVFQD*TISQRI
Trigger: GATTCTCTGGCTGATGGTCAAGTCCTGGAATACCGG...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS TCA 90 bp GTTGCAAATTCAGGTAACAGCAAGCCATGTTCCTCTGCAGCTTGGTaGAGTCCAGATCCATTTCATCAGTTGAATAAAACCTCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: VANSGNSKPCSSAAW*SPDPFHQLNKTSEN
Trigger: ATTCTCTGAGGTTTTATTCAACTGATGAAATGGATCTGGACTTCACCAAGCTGCAGAGGAACATGGCTTGCTGTTACCTGAATTTGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTGCCATAGACTCCCTGTaGATATTTGCTATGTCGCTG +
Preference number: 5 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSAIDSL*IFAMSL
Trigger: CAGCGACATAGCAAATATCAACAGGGAGTCTATGGC...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTGCCATAGACTCCCTGTaGATATTTGCTATGTCGCTG +
Preference number: 5 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSAIDSL*IFAMSL
Trigger: CAGCGACATAGCAAATATCAACAGGGAGTCTATGGC...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATACTGGCCACAGCAGCTaGAAAACATTCATCAGCGAT +
Preference number: 5 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHTGHSS*KTFISD
Trigger: ATCGCTGATGAATGTTTTCAAGCTGCTGTGGCCAGT...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCACACATAGATGCTCTTaGAAAATCCCCTTGAGCAAC +
Preference number: 5 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSTHRCS*KIPLSN
Trigger: GTTGCTCAAGGGGATTTTCAAAGAGCATCTATGTGT...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTGTGTAACCAGTTCATaGATTCTGCTGTCAGTTGTC +
Preference number: 5 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSCVTSS*ILLSVV
Trigger: GACAACTGACAGCAGAATCAATGAACTGGTTACACA...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGATGTTCCTCTGCAGCTaGGTGAAGTCCAGATCCATT +
Preference number: 5 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMMFLCS*VKSRSI
Trigger: AATGGATCTGGACTTCACCAAGCTGCAGAGGAACAT...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTATGTTCCTCTGCAGCTaGGTGAAGTCCAGATCCATT +
Preference number: 5 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSMFLCS*VKSRSI
Trigger: AATGGATCTGGACTTCACCAAGCTGCAGAGGAACAT...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATATGTTCCTCTGCAGCTaGGTGAAGTCCAGATCCATT +
Preference number: 5 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHMFLCS*VKSRSI
Trigger: AATGGATCTGGACTTCACCAAGCTGCAGAGGAACAT...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATCTGCCACTGCCTCTTaGGCCTTATCAAGTTGTTGC +
Preference number: 5 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSSATAS*ALSSCC
Trigger: GCAACAACTTGATAAGGCCAAAGAGGCAGTGGCAGA...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTGGATCTTTGTCACATaGCACAGCCAAGTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSWIFVT*HSQVPS
Trigger: GCTTGGAACTTGGCTGTGCAATGTGACAAAGATCCA...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTTGGATCTTTGTCACATaGCACAGCCAAGTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCWIFVT*HSQVPS
Trigger: GCTTGGAACTTGGCTGTGCAATGTGACAAAGATCCA...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTGGATCTTTGTCACATaGCACAGCCAAGTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSWIFVT*HSQVPS
Trigger: GCTTGGAACTTGGCTGTGCAATGTGACAAAGATCCA...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCAAAACTGGGCCCTTGTaGTTACTCAATGCTTCCACA +
Preference number: 5 (lower is better)
Translates to: WQKFKQSASRDNVSSSCGKTGPL*LLNAST
Trigger: TGTGGAAGCATTGAGTAACAACAAGGGCCCAGTTTT...GCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGAGTTGGTTAGTTGGTTaGTTTATTCCCCCAATGCAA +
Preference number: 5 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLSWLVG*FIPPMQ
Trigger: TTGCATTGGGGGAATAAACAAACCAACTAACCAACT...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374320.6
CDS GCA 90 bp CCAGTAGCCATGTTCATGAAAAACTGGGCCCTTGTTGTTACTCAATaGTTCCACAAGCTGACTATACAGCATATTCATCTGAGTTTCATA +
Preference number: 5 (lower is better)
Translates to: PVAMFMKNWALVVTQ*FHKLTIQHIHLSFI
Trigger: TATGAAACTCAGATGAATATGCTGTATAGTCAGCTTGTGGAAGCATTGAGTAACAACAAGGGCCCAGTTTTTCATGAACATGGCTACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCAGCCATAGACTCCCTGTaGATATTTGCTATGTCGCTG +
Preference number: 5 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSAIDSL*IFAMSL
Trigger: CAGCGACATAGCAAATATCAACAGGGAGTCTATGGC...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCAACTGGCCACAGCAGCTaGAAAACATTCATCAGCGAT +
Preference number: 5 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSTGHSS*KTFISD
Trigger: ATCGCTGATGAATGTTTTCAAGCTGCTGTGGCCAGT...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTAAAACTACTGGCAGCTaGTCTCCACAGAATGTTGTG +
Preference number: 5 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCKTTGS*SPQNVV
Trigger: CACAACATTCTGTGGAGACAAGCTGCCAGTAGTTTT...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTAAAACTACTGGCAGCTaGTCTCCACAGAATGTTGTG +
Preference number: 5 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSKTTGS*SPQNVV
Trigger: CACAACATTCTGTGGAGACAAGCTGCCAGTAGTTTT...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAAAACTACTGGCAGCTaGTCTCCACAGAATGTTGTG +
Preference number: 5 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMKTTGS*SPQNVV
Trigger: CACAACATTCTGTGGAGACAAGCTGCCAGTAGTTTT...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCAATGTTCCTCTGCAGCTaGGTGAAGTCCAGATCCATT +
Preference number: 5 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSMFLCS*VKSRSI
Trigger: AATGGATCTGGACTTCACCAAGCTGCAGAGGAACAT...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTTGTTTGGCCTTATCAAGTaGTTGCAAATTCAGGTAACA +
Preference number: 5 (lower is better)
Translates to: LNSQHLGTMYLLHVAMSLFGLIK*LQIQVT
Trigger: TGTTACCTGAATTTGCAACAACTTGATAAGGCCAAA...CAAGCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTATCATCACTGGATCTTaGTCACATTGCACAGCCAAG +
Preference number: 5 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSIITGS*SHCTAK
Trigger: CTTGGCTGTGCAATGTGACAAAGATCCAGTGATGAT...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTATCATCACTGGATCTTaGTCACATTGCACAGCCAAG +
Preference number: 5 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSIITGS*SHCTAK
Trigger: CTTGGCTGTGCAATGTGACAAAGATCCAGTGATGAT...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCTCTCACATGAATCATTaGAGAAGGTCCCTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSSHMNH*RRSLFV
Trigger: AACAAACAGGGACCTTCTCAAATGATTCATGTGAGA...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTAAAACTGGGCCCTTGTaGTTACTCAATGCTTCCACA +
Preference number: 5 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSKTGPL*LLNAST
Trigger: TGTGGAAGCATTGAGTAACAACAAGGGCCCAGTTTT...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGAAAACTGGGCCCTTGTaGTTACTCAATGCTTCCACA +
Preference number: 5 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVKTGPL*LLNAST
Trigger: TGTGGAAGCATTGAGTAACAACAAGGGCCCAGTTTT...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS GCA 90 bp AATCTGAATGTCTGTTATTTCAGCCATAGACTCCCTGTTGATATTTaGTATGTCGCTGAAGAGTCTATCAATTGCCTCTGGTATGTTAGG +
Preference number: 5 (lower is better)
Translates to: NLNVCYFSHRLPVDI*YVAEESINCLWYVR
Trigger: CCTAACATACCAGAGGCAATTGATAGACTCTTCAGCGACATAGCAAATATCAACAGGGAGTCTATGGCTGAAATAACAGACATTCAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGACACATAGATGCTCTTaGAAAATCCCCTTGAGCAAC +
Preference number: 5 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVTHRCS*KIPLSN
Trigger: GTTGCTCAAGGGGATTTTCAAAGAGCATCTATGTGT...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTACACATAGATGCTCTTaGAAAATCCCCTTGAGCAAC +
Preference number: 5 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSTHRCS*KIPLSN
Trigger: GTTGCTCAAGGGGATTTTCAAAGAGCATCTATGTGT...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCCAACATATCTTTACATaGCAGTACACACATAGATGC +
Preference number: 5 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSQHIFT*QYTHRC
Trigger: GCATCTATGTGTGTACTGCAATGTAAAGATATGTTG...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGCCCAATATCATAGCTTaGGCTAAGCCAGAAAGAACT +
Preference number: 5 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMPNIIA*AKPERT
Trigger: AGTTCTTTCTGGCTTAGCCAAAGCTATGATATTGGG...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTCCCAATATCATAGCTTaGGCTAAGCCAGAAAGAACT +
Preference number: 5 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSPNIIA*AKPERT
Trigger: AGTTCTTTCTGGCTTAGCCAAAGCTATGATATTGGG...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCGAACTTAAATGTTCCTaGTTTGCTAGGTTTACAGCA +
Preference number: 5 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSELKCS*FARFTA
Trigger: TGCTGTAAACCTAGCAAACAAGGAACATTTAAGTTC...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCTTCAATCTTCTCCTaGGCAAGAAGTTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSSSIFS*ARSSSF
Trigger: GAAGGAAGAACTTCTTGCCAAGGAGAAGATTGAAGA...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCAATCTTCTCCTaGGCAAGAAGTTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSSSIFS*ARSSSF
Trigger: GAAGGAAGAACTTCTTGCCAAGGAGAAGATTGAAGA...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATTGTGTAACCAGTTCATaGATTCTGCTGTCAGTTGTC +
Preference number: 5 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHCVTSS*ILLSVV
Trigger: GACAACTGACAGCAGAATCAATGAACTGGTTACACA...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTGTGTAACCAGTTCATaGATTCTGCTGTCAGTTGTC +
Preference number: 5 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSCVTSS*ILLSVV
Trigger: GACAACTGACAGCAGAATCAATGAACTGGTTACACA...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTGGCATCAGTGTAATTTaGTACCTCAAAACTACTGGC +
Preference number: 5 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSGISVI*YLKTTG
Trigger: GCCAGTAGTTTTGAGGTACAAAATTACACTGATGCC...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGGGCATCAGTGTAATTTaGTACCTCAAAACTACTGGC +
Preference number: 5 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMGISVI*YLKTTG
Trigger: GCCAGTAGTTTTGAGGTACAAAATTACACTGATGCC...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTGGCCTTATCAAGTTGTaGCAAATTCAGGTAACAGCA +
Preference number: 5 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSGLIKL*QIQVTA
Trigger: TGCTGTTACCTGAATTTGCAACAACTTGATAAGGCC...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGGCCTTATCAAGTTGTaGCAAATTCAGGTAACAGCA +
Preference number: 5 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHGLIKL*QIQVTA
Trigger: TGCTGTTACCTGAATTTGCAACAACTTGATAAGGCC...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCAATCATCACTGGATCTTaGTCACATTGCACAGCCAAG +
Preference number: 5 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSIITGS*SHCTAK
Trigger: CTTGGCTGTGCAATGTGACAAAGATCCAGTGATGAT...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGTCTGTTCAAAAGCTGTaGAAGCTTTTCTCCCTTGCT +
Preference number: 5 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMSVQKL*KLFSLA
Trigger: AGCAAGGGAGAAAAGCTTCAACAGCTTTTGAACAGA...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGTCTGTTCAAAAGCTGTaGAAGCTTTTCTCCCTTGCT +
Preference number: 5 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVSVQKL*KLFSLA
Trigger: AGCAAGGGAGAAAAGCTTCAACAGCTTTTGAACAGA...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTTCTGTTCAAAAGCTGTaGAAGCTTTTCTCCCTTGCT +
Preference number: 5 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCSVQKL*KLFSLA
Trigger: AGCAAGGGAGAAAAGCTTCAACAGCTTTTGAACAGA...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCTGTTCAAAAGCTGTaGAAGCTTTTCTCCCTTGCT +
Preference number: 5 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSSVQKL*KLFSLA
Trigger: AGCAAGGGAGAAAAGCTTCAACAGCTTTTGAACAGA...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCAAATTATGGATGTCATaGCATGTCTGGATCTCCTCA +
Preference number: 5 (lower is better)
Translates to: WQKFKQSASRDNVSSSCGKLWMS*HVWISS
Trigger: TGAGGAGATCCAGACATGCAATGACATCCATAATTT...GCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCAATGGATCATTCAATTaGGCTCTAACTTCAAACTCG +
Preference number: 5 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSNGSFN*ALTSNS
Trigger: CGAGTTTGAAGTTAGAGCCAAATTGAATGATCCATT...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAGCGTGCAGGCTTTTCCATaGCTATTATTGCAATTGTTT +
Preference number: 5 (lower is better)
Translates to: NLNSQHLGTMYLLHVAMSVQAFP*LLLQLF
Trigger: AAACAATTGCAATAATAGCAATGGAAAAGCCTGCAC...GCTCATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTTCAGCAGATGCATACTaGCTCCTGCTAAACATAAGT +
Preference number: 5 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCSADAY*LLLNIS
Trigger: ACTTATGTTTAGCAGGAGCAAGTATGCATCTGCTGA...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGTCAGCAGATGCATACTaGCTCCTGCTAAACATAAGT +
Preference number: 5 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMSADAY*LLLNIS
Trigger: ACTTATGTTTAGCAGGAGCAAGTATGCATCTGCTGA...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATTCAGCAGATGCATACTaGCTCCTGCTAAACATAAGT +
Preference number: 5 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHSADAY*LLLNIS
Trigger: ACTTATGTTTAGCAGGAGCAAGTATGCATCTGCTGA...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCAGGCATCAGTGTAATTTaGTACCTCAAAACTACTGGC +
Preference number: 5 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSGISVI*YLKTTG
Trigger: GCCAGTAGTTTTGAGGTACAAAATTACACTGATGCC...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCAGGCCTTATCAAGTTGTaGCAAATTCAGGTAACAGCA +
Preference number: 5 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSGLIKL*QIQVTA
Trigger: TGCTGTTACCTGAATTTGCAACAACTTGATAAGGCC...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAAATTATGGATGTCATaGCATGTCTGGATCTCCTCA +
Preference number: 5 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMKLWMS*HVWISS
Trigger: TGAGGAGATCCAGACATGCAATGACATCCATAATTT...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATTCTCACATGAATCATTaGAGAAGGTCCCTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHSHMNH*RRSLFV
Trigger: AACAAACAGGGACCTTCTCAAATGATTCATGTGAGA...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTTCTCACATGAATCATTaGAGAAGGTCCCTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCSHMNH*RRSLFV
Trigger: AACAAACAGGGACCTTCTCAAATGATTCATGTGAGA...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCGTGCAGGCTTTTCCATaGCTATTATTGCAATTGTTT +
Preference number: 5 (lower is better)
Translates to: WQKFKQSASRDNVSSSCGVQAFP*LLLQLF
Trigger: AAACAATTGCAATAATAGCAATGGAAAAGCCTGCAC...GCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGGAGAGGTTAACCAAGTaGTGCATACATTTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMERLTK*CIHLLY
Trigger: ATACAGCAAATGTATGCACAACTTGGTTAACCTCTC...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGAGAGGTTAACCAAGTaGTGCATACATTTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVERLTK*CIHLLY
Trigger: ATACAGCAAATGTATGCACAACTTGGTTAACCTCTC...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGAGAGGTTAACCAAGTaGTGCATACATTTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCERLTK*CIHLLY
Trigger: ATACAGCAAATGTATGCACAACTTGGTTAACCTCTC...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTGAGAGGTTAACCAAGTaGTGCATACATTTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSERLTK*CIHLLY
Trigger: ATACAGCAAATGTATGCACAACTTGGTTAACCTCTC...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGCTAATGTACTTCAACTaGGTGACTCCAATCATCTCT +
Preference number: 5 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMLMYFN*VTPIIS
Trigger: AGAGATGATTGGAGTCACCAAGTTGAAGTACATTAG...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374320.6
CDS-3UTR CAA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGCAACATATCTTTACATaGCAGTACACACATAGATGC +
Preference number: 5 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVQHIFT*QYTHRC
Trigger: GCATCTATGTGTGTACTGCAATGTAAAGATATGTTG...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTCAACATATCTTTACATaGCAGTACACACATAGATGC +
Preference number: 5 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSQHIFT*QYTHRC
Trigger: GCATCTATGTGTGTACTGCAATGTAAAGATATGTTG...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGAACTTAAATGTTCCTaGTTTGCTAGGTTTACAGCA +
Preference number: 5 (lower is better)
Translates to: QKFKQSASRDNVSSSCGHELKCS*FARFTA
Trigger: TGCTGTAAACCTAGCAAACAAGGAACATTTAAGTTC...ATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGCCATGTTTGGCCTTATCAAGTaGTTGCAAATTCAGGTAACA +
Preference number: 5 (lower is better)
Translates to: KNLNSQHLGTMYLLHVAMFGLIK*LQIQVT
Trigger: TGTTACCTGAATTTGCAACAACTTGATAAGGCCAAA...CATGGCCACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGTTTGGCCTTATCAAGTaGTTGCAAATTCAGGTAACA +
Preference number: 5 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVFGLIK*LQIQVT
Trigger: TGTTACCTGAATTTGCAACAACTTGATAAGGCCAAA...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCAAAATTATGGATGTCATaGCATGTCTGGATCTCCTCA +
Preference number: 5 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSKLWMS*HVWISS
Trigger: TGAGGAGATCCAGACATGCAATGACATCCATAATTT...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp GAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTAATGGATCATTCAATTaGGCTCTAACTTCAAACTCG +
Preference number: 5 (lower is better)
Translates to: EKLWQKFKQSASRDNVSSNGSFN*ALTSNS
Trigger: CGAGTTTGAAGTTAGAGCCAAATTGAATGATCCATT...AGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CAAGAGAAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTAATGGATCATTCAATTaGGCTCTAACTTCAAACTCG +
Preference number: 5 (lower is better)
Translates to: QEKLWQKFKQSASRDNVSNGSFN*ALTSNS
Trigger: CGAGTTTGAAGTTAGAGCCAAATTGAATGATCCATT...AGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTTCTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGAATGGATCATTCAATTaGGCTCTAACTTCAAACTCG +
Preference number: 5 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVNGSFN*ALTSNS
Trigger: CGAGTTTGAAGTTAGAGCCAAATTGAATGATCCATT...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp TCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGGTGCAGGCTTTTCCATaGCTATTATTGCAATTGTTT +
Preference number: 5 (lower is better)
Translates to: SGKNLNSQHLGTMYLLHVVQAFP*LLLQLF
Trigger: AAACAATTGCAATAATAGCAATGGAAAAGCCTGCAC...CACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS-3UTR CAA 90 bp CTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCATGTGTGCAGGCTTTTCCATaGCTATTATTGCAATTGTTT +
Preference number: 5 (lower is better)
Translates to: LWQKFKQSASRDNVSSSCVQAFP*LLLQLF
Trigger: AAACAATTGCAATAATAGCAATGGAAAAGCCTGCAC...ACATGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS TCA 90 bp AAACACTTTACAGCTGTAAGAACTTGTTCCTGGTCTTCTGAATGTTaGGCTAAATATTCCAAAGCTTTTTCTGCCACAATTTGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: KHFTAVRTCSWSSEC*AKYSKAFSATICCP
Trigger: TGGACAACAAATTGTGGCAGAAAAAGCTTTGGAATATTTAGCTCAACATTCAGAAGACCAGGAACAAGTTCTTACAGCTGTAAAGTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS TCA 90 bp TGCTATGTCGCTGAAGAGTCTATCAATTGCCTCTGGTATGTTAGGTaGATTATCATTTGTAACCAGGTTTTCAACAACTTCTTTAAAGTC +
Preference number: 5 (lower is better)
Translates to: CYVAEESINCLWYVR*IIICNQVFNNFFKV
Trigger: GACTTTAAAGAAGTTGTTGAAAACCTGGTTACAAATGATAATTCACCTAACATACCAGAGGCAATTGATAGACTCTTCAGCGACATAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374333.7
CDS-3UTR CAA 90 bp AAACTCTGGCAAAAATTTAAACAGTCAGCATCTCGGGACAATGTATCTTCTTCAGAACTTAAATGTTCCTaGTTTGCTAGGTTTACAGCA +
Preference number: 5 (lower is better)
Translates to: KLWQKFKQSASRDNVSSSELKCS*FARFTA
Trigger: TGCTGTAAACCTAGCAAACAAGGAACATTTAAGTTC...TGAAGAAGATACATTGTCCCGAGATGCTGACTGTTTAAATTTTTGCCAGAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS CCA 72 bp CCAGGACTTGACCATCAGCCAGAGAATCTCCATTTCTaGGTAGTCTTTAGTGCGGCTAATGTGGCTCAGAGC +
Preference number: 6 (lower is better)
Translates to: PGLDHQPENLHF*VVFSAANVAQS
Trigger: GCTCTGAGCCACATTAGCCGCACTAAAGACTACCCAGAAATGGAGATTCTCTGGCTGATGGTCAAGTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS CAA 90 bp AGGAAACGCAAGGCCAGGCCACACCACTTTTCAGCAGATGCATACTaGCTCCTGCTAAACATAAGTACTCCGGTATTCCAGGACTTGACC +
Preference number: 6 (lower is better)
Translates to: RKRKARPHHFSADAY*LLLNISTPVFQDLT
Trigger: GGTCAAGTCCTGGAATACCGGAGTACTTATGTTTAGCAGGAGCAAGTATGCATCTGCTGAAAAGTGGTGTGGCCTGGCCTTGCGTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS TCA 72 bp GGGACAGAGCTCTACATTCGACGCCCCATCTGGCACTaGGAGGTTAACCAAGTTGTGCATACATTTGCTGTA +
Preference number: 6 (lower is better)
Translates to: GTELYIRRPIWH*EVNQVVHTFAV
Trigger: TACAGCAAATGTATGCACAACTTGGTTAACCTCTCAGTGCCAGATGGGGCGTCGAATGTAGAGCTCTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS GCA 72 bp CTTCTTCATGTGGCCATGAGCTTGCCTAATCTGACTTaGTCCAGTAGCCATGTTCATGAAAAACTGGGCCCT +
Preference number: 6 (lower is better)
Translates to: LLHVAMSLPNLT*SSSHVHEKLGP
Trigger: AGGGCCCAGTTTTTCATGAACATGGCTACTGGAGCAAGTCAGATTAGGCAAGCTCATGGCCACATGAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS CAA 72 bp AAGGCCAGGCCACACCACTTTTCAGCAGATGCATACTaGCTCCTGCTAAACATAAGTACTCCGGTATTCCAG +
Preference number: 6 (lower is better)
Translates to: KARPHHFSADAY*LLLNISTPVFQ
Trigger: CTGGAATACCGGAGTACTTATGTTTAGCAGGAGCAAGTATGCATCTGCTGAAAAGTGGTGTGGCCTGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS GCA 72 bp AGGTCCCTGTTTGTTTCAGGAAATTATGGATGTCATTaGATGTCTGGATCTCCTCAAGTGCACGACTCAGGA +
Preference number: 6 (lower is better)
Translates to: RSLFVSGNYGCH*MSGSPQVHDSG
Trigger: TCCTGAGTCGTGCACTTGAGGAGATCCAGACATGCAATGACATCCATAATTTCCTGAAACAAACAGGGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS TCA 72 bp TGCACAGCCAAGTTCCAAGCTGTTTTTCGAAACCACTaGGCTTCATTAGCTCTTGACTCCAAACTTAAGGCT +
Preference number: 6 (lower is better)
Translates to: CTAKFQAVFRNH*ASLALDSKLKA
Trigger: AGCCTTAAGTTTGGAGTCAAGAGCTAATGAAGCTCAGTGGTTTCGAAAAACAGCTTGGAACTTGGCTGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS GCA 72 bp ATTATGGATGTCATTGCATGTCTGGATCTCCTCAAGTaGACGACTCAGGAACATGGTCTGTTCAAAAGCTGT +
Preference number: 6 (lower is better)
Translates to: IMDVIACLDLLK*TTQEHGLFKSC
Trigger: ACAGCTTTTGAACAGACCATGTTCCTGAGTCGTGCACTTGAGGAGATCCAGACATGCAATGACATCCATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS TCA 72 bp CTTGACTCCAAACTTAAGGCTTCTTCACCAAAAGGCTaGGAAAGTTTCACAAAGGCTCTATTCAGGCAAGTC +
Preference number: 6 (lower is better)
Translates to: LDSKLKASSPKG*ESFTKALFRQV
Trigger: GACTTGCCTGAATAGAGCCTTTGTGAAACTTTCTCAGCCTTTTGGTGAAGAAGCCTTAAGTTTGGAGTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS GCA 72 bp GTCTGTTATTTCAGCCATAGACTCCCTGTTGATATTTaGTATGTCGCTGAAGAGTCTATCAATTGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: VCYFSHRLPVDI*YVAEESINCLW
Trigger: CCAGAGGCAATTGATAGACTCTTCAGCGACATAGCAAATATCAACAGGGAGTCTATGGCTGAAATAACAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS TCA 72 bp TTGACGTATAATTGCTCCAGACTGGCCACAGCAGCTTaGAAACATTCATCAGCGATTAGAAAATTTCCAGCA +
Preference number: 6 (lower is better)
Translates to: LTYNCSRLATAA*KHSSAIRKFPA
Trigger: TGCTGGAAATTTTCTAATCGCTGATGAATGTTTTCAAGCTGCTGTGGCCAGTCTGGAGCAATTATACGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS CAA 72 bp TTCGACGCCCCATCTGGCACTGAGAGGTTAACCAAGTaGTGCATACATTTGCTGTATTGTGATATATCAATT +
Preference number: 6 (lower is better)
Translates to: FDAPSGTERLTK*CIHLLYCDISI
Trigger: AATTGATATATCACAATACAGCAAATGTATGCACAACTTGGTTAACCTCTCAGTGCCAGATGGGGCGTCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS CAA 90 bp TCCCACACTGATTCCAGGAAGCTTTCCAGTAATGGATCATTCAATTaGGCTCTAACTTCAAACTCGTACAGCAGAAGCAATTTCTCACAT +
Preference number: 6 (lower is better)
Translates to: SHTDSRKLSSNGSFN*ALTSNSYSRSNFSH
Trigger: ATGTGAGAAATTGCTTCTGCTGTACGAGTTTGAAGTTAGAGCCAAATTGAATGATCCATTACTGGAAAGCTTCCTGGAATCAGTGTGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS GCA 72 bp ATGGTCTGTTCAAAAGCTGTTGAAGCTTTTCTCCCTTaGTCTAGATCAACTGCAACTGCCATAAGTAAACAT +
Preference number: 6 (lower is better)
Translates to: MVCSKAVEAFLP*SRSTATAISKH
Trigger: ATGTTTACTTATGGCAGTTGCAGTTGATCTAGAGCAAGGGAGAAAAGCTTCAACAGCTTTTGAACAGACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS GCA 72 bp ATGTTCATGAAAAACTGGGCCCTTGTTGTTACTCAATaGTTCCACAAGCTGACTATACAGCATATTCATCTG +
Preference number: 6 (lower is better)
Translates to: MFMKNWALVVTQ*FHKLTIQHIHL
Trigger: CAGATGAATATGCTGTATAGTCAGCTTGTGGAAGCATTGAGTAACAACAAGGGCCCAGTTTTTCATGAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS CAA 72 bp GTTGCCCTCTATGACTGCAATCTTGAATATATAAAATaGAGTGAAAACGTTCCTAGGGTCATGTCGTTCAGC +
Preference number: 6 (lower is better)
Translates to: VALYDCNLEYIK*SENVPRVMSFS
Trigger: GCTGAACGACATGACCCTAGGAACGTTTTCACTCAATTTTATATATTCAAGATTGCAGTCATAGAGGGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS GCA 72 bp CTTTTTCAAGGCCTTGAGAGCAATCAAAGGATAGTGTaGAGGCTTTTCCATTGCTATTATTGCAATTGTTTC +
Preference number: 6 (lower is better)
Translates to: LFQGLESNQRIV*RLFHCYYCNCF
Trigger: GAAACAATTGCAATAATAGCAATGGAAAAGCCTGCACACTATCCTTTGATTGCTCTCAAGGCCTTGAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS CAA 90 bp AACACTGTCATAAGGAATTATCATCCCAAACTAATGTACTTCAACTaGGTGACTCCAATCATCTCTCTGGTCTTCCTATGTTGTCTTAGT +
Preference number: 6 (lower is better)
Translates to: NTVIRNYHPKLMYFN*VTPIISLVFLCCLS
Trigger: ACTAAGACAACATAGGAAGACCAGAGAGATGATTGGAGTCACCAAGTTGAAGTACATTAGTTTGGGATGATAATTCCTTATGACAGTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374320.6
CDS TCA 72 bp GCTGAAGAGTCTATCAATTGCCTCTGGTATGTTAGGTaGATTATCATTTGTAACCAGGTTTTCAACAACTTC +
Preference number: 6 (lower is better)
Translates to: AEESINCLWYVR*IIICNQVFNNF
Trigger: GAAGTTGTTGAAAACCTGGTTACAAATGATAATTCACCTAACATACCAGAGGCAATTGATAGACTCTTCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344304.3
ENST00000374333.7
ENST00000395889.6
CDS TCA 72 bp ACAGCTGTAAGAACTTGTTCCTGGTCTTCTGAATGTTaGGCTAAATATTCCAAAGCTTTTTCTGCCACAATT +
Preference number: 6 (lower is better)
Translates to: TAVRTCSWSSEC*AKYSKAFSATI
Trigger: AATTGTGGCAGAAAAAGCTTTGGAATATTTAGCTCAACATTCAGAAGACCAGGAACAAGTTCTTACAGCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344304.3
ENST00000374320.6
ENST00000374333.7
ENST00000395889.6
CDS CAA 72 bp ATAAGGAATTATCATCCCAAACTAATGTACTTCAACTaGGTGACTCCAATCATCTCTCTGGTCTTCCTATGT +
Preference number: 6 (lower is better)
Translates to: IRNYHPKLMYFN*VTPIISLVFLC
Trigger: ACATAGGAAGACCAGAGAGATGATTGGAGTCACCAAGTTGAAGTACATTAGTTTGGGATGATAATTCCTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374320.6