RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TENT5C (Homo sapiens)

Ensembl gene IDs: ENSG00000183508

Ensembl transcript IDs: ENST00000369448.4

Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTGAAGGGACTCCGAGACAACCATGGTGCAATGGTGGCAAAGACTaGGGACTGGGTCTTTCTCGCAACTTCTGTGCCTCCTTTCATTCT +
Preference number: 1 (lower is better)
Translates to: GEGTPRQPWCNGGKD*GLGLSRNFCASFHS
Trigger: AGAATGAAAGGAGGCACAGAAGTTGCGAGAAAGACCCAGTCCCCAGTCTTTGCCACCATTGCACCATGGTTGTCTCGGAGTCCCTTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR GCA 90 bp CCGGGCTCAAGTGAGAAAACAAGTAGCTTAGCACTTCTCACGCGCTaGCCAAATTCTCCCAATCTCGATTACTGCACAGAGCTCAACCCC +
Preference number: 1 (lower is better)
Translates to: PGSSEKTSSLALLTR*PNSPNLDYCTELNP
Trigger: GGGGTTGAGCTCTGTGCAGTAATCGAGATTGGGAGAATTTGGGCAGCGCGTGAGAAGTGCTAAGCTACTTGTTTTCTCACTTGAGCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR TCA 90 bp TTGGTACAAGAGAAGAGATTATCAGCACAACTTTCATGTAACTGCTaGGAATCCCAAGTGAGGGCCAACACAGCCTACCCGGGCTCAAGT +
Preference number: 1 (lower is better)
Translates to: LVQEKRLSAQLSCNC*ESQVRANTAYPGSS
Trigger: ACTTGAGCCCGGGTAGGCTGTGTTGGCCCTCACTTGGGATTCTCAGCAGTTACATGAAAGTTGTGCTGATAATCTCTTCTCTTGTACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR GCA 90 bp AGTTTCCAAAGTTGGGATCACTCTTCATTGGGGTTCACTCTTCATTaGCCCACTCTTAACACTGAAGCACACTGGGTCCCCTCAATTAGA +
Preference number: 1 (lower is better)
Translates to: SFQSWDHSSLGFTLH*PTLNTEAHWVPSIR
Trigger: TCTAATTGAGGGGACCCAGTGTGCTTCAGTGTTAAGAGTGGGGCAATGAAGAGTGAACCCCAATGAAGAGTGATCCCAACTTTGGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR TCA 90 bp GATTACTGCACAGAGCTCAACCCCCACGTGCTAATGTTTGGGACATaGCATGTTAGTGTCTATCTTGGAAAGATGTGGATAGGTCATGCT +
Preference number: 1 (lower is better)
Translates to: DYCTELNPHVLMFGT*HVSVYLGKMWIGHA
Trigger: AGCATGACCTATCCACATCTTTCCAAGATAGACACTAACATGTCATGTCCCAAACATTAGCACGTGGGGGTTGAGCTCTGTGCAGTAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR GCA 90 bp AGATTTAAAGGGGAGACTAGAGCTCAAGGTCAGGCATCTAGTGCGTaGTATTCTGCCAATGTGAGAGGAAAAGGTACTGTCTTCATCTCA +
Preference number: 1 (lower is better)
Translates to: RFKGETRAQGQASSA*YSANVRGKGTVFIS
Trigger: TGAGATGAAGACAGTACCTTTTCCTCTCACATTGGCAGAATAGCACGCACTAGATGCCTGACCTTGAGCTCTAGTCTCCCCTTTAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CCA 90 bp GTGTCATACTTGGAATGTGACCAAAGTGGGTTTCCAGTTAAAACATaGGAAGACCCTCATGTCAGTTACCACAATGACTCTGGACTCAGC +
Preference number: 1 (lower is better)
Translates to: VSYLECDQSGFPVKT*EDPHVSYHNDSGLS
Trigger: GCTGAGTCCAGAGTCATTGTGGTAACTGACATGAGGGTCTTCCCATGTTTTAACTGGAAACCCACTTTGGTCACATTCCAAGTATGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CCA 90 bp CCAGGTGTGGGCCATCCCACAGGCATCCCCATCAGGAACTCTGATTaGAAGGCATTAGTAATAGAGTTCAGTTTCAGCATTGAAATTATT +
Preference number: 1 (lower is better)
Translates to: PGVGHPTGIPIRNSD*KALVIEFSFSIEII
Trigger: AATAATTTCAATGCTGAAACTGAACTCTATTACTAATGCCTTCCAATCAGAGTTCCTGATGGGGATGCCTGTGGGATGGCCCACACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR TCA 90 bp CATAAGCAGAAAGAACCCCAAGGACAAACTGGAAATTTAATTCCTTaGTGCAGATCTTATCTTCATCTGGTGCCTCATTACCCTGGGCCC +
Preference number: 1 (lower is better)
Translates to: HKQKEPQGQTGNLIP*CRSYLHLVPHYPGP
Trigger: GGGCCCAGGGTAATGAGGCACCAGATGAAGATAAGATCTGCATCAAGGAATTAAATTTCCAGTTTGTCCTTGGGGTTCTTTCTGCTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR TCA 90 bp TATTCTCAAACTACAAAAAGATCTGAGCTGACTAAAAAGGTCAGGTaGAGGGACTCCGAGACAACCATGGTGCAATGGTGGCAAAGACTG +
Preference number: 1 (lower is better)
Translates to: YSQTTKRSELTKKVR*RDSETTMVQWWQRL
Trigger: CAGTCTTTGCCACCATTGCACCATGGTTGTCTCGGAGTCCCTTCACCTGACCTTTTTAGTCAGCTCAGATCTTTTTGTAGTTTGAGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CCA 90 bp GTCATGAATGACCAGATAGTTTCCAAAGTTGGGATCACTCTTCATTaGGGTTCACTCTTCATTGCCCCACTCTTAACACTGAAGCACACT +
Preference number: 1 (lower is better)
Translates to: VMNDQIVSKVGITLH*GSLFIAPLLTLKHT
Trigger: AGTGTGCTTCAGTGTTAAGAGTGGGGCAATGAAGAGTGAACCCCAATGAAGAGTGATCCCAACTTTGGAAACTATCTGGTCATTCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR TCA 90 bp GATTCTAAAGCAGTTCCACAGGTCACTCAGTTCTACCGAAATTCCTaGATTGAGTTGCTGTCAAACACACCTGGAGAAGGAAGTCACTAT +
Preference number: 1 (lower is better)
Translates to: DSKAVPQVTQFYRNS*IELLSNTPGEGSHY
Trigger: ATAGTGACTTCCTTCTCCAGGTGTGTTTGACAGCAACTCAATTCAGGAATTTCGGTAGAACTGAGTGACCTGTGGAACTGCTTTAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR TCA 90 bp GGAAGAGCATTCTCATTCACTCAATTCTTCCCAAATATACTGGAATaGTTTCAAAGTGCCTTGGAAGCTCCAATGCACACAAGGCCAGAC +
Preference number: 1 (lower is better)
Translates to: GRAFSFTQFFPNILE*FQSALEAPMHTRPD
Trigger: GTCTGGCCTTGTGTGCATTGGAGCTTCCAAGGCACTTTGAAATCATTCCAGTATATTTGGGAAGAATTGAGTGAATGAGAATGCTCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR GCA 90 bp TATTTAGCTACTTCCTCTTTAGTAGATGGTCATCTCACCTTCCTATaGAAACACACACAAGAATTTGCACCAACTCTCACTAGCCCAGGC +
Preference number: 1 (lower is better)
Translates to: YLATSSLVDGHLTFL*KHTQEFAPTLTSPG
Trigger: GCCTGGGCTAGTGAGAGTTGGTGCAAATTCTTGTGTGTGTTTGCATAGGAAGGTGAGATGACCATCTACTAAAGAGGAAGTAGCTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CCA 90 bp AAAAACACCCACAGATCTGTATTTAGCTACTTCCTCTTTAGTAGATaGTCATCTCACCTTCCTATGCAAACACACACAAGAATTTGCACC +
Preference number: 1 (lower is better)
Translates to: KNTHRSVFSYFLFSR*SSHLPMQTHTRICT
Trigger: GGTGCAAATTCTTGTGTGTGTTTGCATAGGAAGGTGAGATGACCATCTACTAAAGAGGAAGTAGCTAAATACAGATCTGTGGGTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR TCA 90 bp AAACTCAAAGCTTTATCAAGTTCTAACACATTTTGCATTGACAAGTaGTTTTATCTGCATCAAGTAAGGTTAGTGACCACCACGAAAGAG +
Preference number: 1 (lower is better)
Translates to: KLKALSSSNTFCIDK*FYLHQVRLVTTTKE
Trigger: CTCTTTCGTGGTGGTCACTAACCTTACTTGATGCAGATAAAATCACTTGTCAATGCAAAATGTGTTAGAACTTGATAAAGCTTTGAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR GCA 90 bp CAACCTGACTCCAAGCAGCAGGCTAGGAGAACAGGCTGCAGACATGCCGAAAGCGCACTTCTCACGCGCTaGCCAAATTCTCCCAATCTC +
Preference number: 2 (lower is better)
Translates to: QPDSKQQARRTGCRHAESALLTR*PNSPNL
Trigger: GAGATTGGGAGAATTTGGGCAGCGCGTGAGAAGTGC...GCTTTCGGCATGTCTGCAGCCTGTTCTCCTAGCCTGCTGCTTGGAGTCAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR GCA 90 bp CAACCTGACTCCAAGCAGCAGGCTAGGAGAACAGGCTGCAGACATGCCGAAAGCGCATGTGAACTTCAGTaGTCTCTGCTACTGCCAAGT +
Preference number: 2 (lower is better)
Translates to: QPDSKQQARRTGCRHAESACELQ*SLLLPS
Trigger: ACTTGGCAGTAGCAGAGAGCACTGAAGTTCACATGC...GCTTTCGGCATGTCTGCAGCCTGTTCTCCTAGCCTGCTGCTTGGAGTCAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR TCA 90 bp AGATTTAAAGGGGAGACTAGAGCTCAAGGTCAGGCATCTAGTGCGTGCTATTCTGCTGAGAATCCCAAGTaGGGGCCAACACAGCCTACC +
Preference number: 2 (lower is better)
Translates to: RFKGETRAQGQASSACYSAENPK*GPTQPT
Trigger: GGTAGGCTGTGTTGGCCCTCACTTGGGATTCTCAGC...AGAATAGCACGCACTAGATGCCTGACCTTGAGCTCTAGTCTCCCCTTTAAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR GCA 90 bp CCCAAGCTGGCTGGCAATATTGAGTGTCTCTGCCCTGAAGTGATGCTTTCTAAGCCCAATCTCGATTACTaGACAGAGCTCAACCCCCAC +
Preference number: 2 (lower is better)
Translates to: PKLAGNIECLCPEVMLSKPNLDY*TELNPH
Trigger: GTGGGGGTTGAGCTCTGTGCAGTAATCGAGATTGGG...CTTAGAAAGCATCACTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR GCA 90 bp GGATGTGAATCTAACCTTGGAAACTGGATTCTTACAAAGTCCACCCAGAAGGTTCCAACTCACCCCATCTaGCAGGTCCCCCAGGTGTGG +
Preference number: 2 (lower is better)
Translates to: GCESNLGNWILTKSTQKVPTHPI*QVPQVW
Trigger: CCACACCTGGGGGACCTGGCAGATGGGGTGAGTTGG...AACCTTCTGGGTGGACTTTGTAAGAATCCAGTTTCCAAGGTTAGATTCACATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR CCA 90 bp CCTGGTGCTTGTGTGAGCATTAGGAAAGGCAGGTTTCAGCTAGAGTTTCCAGGGGGGTCCTTTGAGGGTTaGCTCATGATACACTGTAGA +
Preference number: 2 (lower is better)
Translates to: PGACVSIRKGRFQLEFPGGSFEG*LMIHCR
Trigger: TCTACAGTGTATCATGAGCCAACCCTCAAAGGACCC...CCCTGGAAACTCTAGCTGAAACCTGCCTTTCCTAATGCTCACACAAGCACCAGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR TCA 90 bp CTTCATTGCCCCACTCTTAACACTGAAGCACACTGGGTCCCCTCAATTAGAACCTTGAGGGTTGGCTCATaGTACACTGTAGACCCATTC +
Preference number: 2 (lower is better)
Translates to: LHCPTLNTEAHWVPSIRTLRVGS*YTVDPF
Trigger: GAATGGGTCTACAGTGTATCATGAGCCAACCCTCAA...GGTTCTAATTGAGGGGACCCAGTGTGCTTCAGTGTTAAGAGTGGGGCAATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR GCA 90 bp TTAGAACCCAAGCTGGCTGGCAATATTGAGTGTCTCTGCCCTGAAGTGATGCTTCCTTGGAAGCTCCAATaGACACAAGGCCAGACTTCA +
Preference number: 2 (lower is better)
Translates to: LEPKLAGNIECLCPEVMLPWKLQ*TQGQTS
Trigger: TGAAGTCTGGCCTTGTGTGCATTGGAGCTTCCAAGG...AAGCATCACTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCTTGGGTTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR TCA 90 bp TTAGAACCCAAGCTGGCTGGCAATATTGAGTGTCTCTGCCCTGAAGTGATGCTTCATTCTCCACTCCGCTaGCAGGGAATAAACATAAGC +
Preference number: 2 (lower is better)
Translates to: LEPKLAGNIECLCPEVMLHSPLR*QGINIS
Trigger: GCTTATGTTTATTCCCTGTCAGCGGAGTGGAGAATG...AAGCATCACTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCTTGGGTTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR TCA 90 bp CTTCATTGCCCCACTCTTAACACTGAAGCACACTGGGTCCCCTCAATTAGAACCGTCATACTTGGAATGTaGCCAAAGTGGGTTTCCAGT +
Preference number: 2 (lower is better)
Translates to: LHCPTLNTEAHWVPSIRTVILGM*PKWVSS
Trigger: ACTGGAAACCCACTTTGGTCACATTCCAAGTATGAC...GGTTCTAATTGAGGGGACCCAGTGTGCTTCAGTGTTAAGAGTGGGGCAATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CAA 90 bp CCAGGAAGGAATGGCCTCTATGAGCGTCAGGGTCTCGTCTCACCATaGGATAACTACTTTGCTCTCAAAAAGAGGACATTTGAGCTAAGA +
Preference number: 2 (lower is better)
Translates to: PGRNGLYERQGLVSP*DNYFALKKRTFELR
Trigger: TCTTAGCTCAAATGTCCTCTTTTTGAGAGCAAAGTAGTTATCCAATGGTGAGACGAGACCCTGACGCTCATAGAGGCCATTCCTTCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR TCA 90 bp AATTTGCACCAACTCTCACTAGCCCAGGCAAAACTCCAAGCATTTTATTTAGCTAAGGAATGGCCTCTATaGGCGTCAGGGTCTCGTCTC +
Preference number: 2 (lower is better)
Translates to: NLHQLSLAQAKLQAFYLAKEWPL*ASGSRL
Trigger: GAGACGAGACCCTGACGCTCATAGAGGCCATTCCTT...AGCTAAATAAAATGCTTGGAGTTTTGCCTGGGCTAGTGAGAGTTGGTGCAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR CCA 90 bp CCTGGTGCTTGTGTGAGCATTAGGAAAGGCAGGTTTCAGCTAGAGTTTCCAGGGTTTCCAGTTAAAACATaGGAAGACCCTCATGTCAGT +
Preference number: 2 (lower is better)
Translates to: PGACVSIRKGRFQLEFPGFPVKT*EDPHVS
Trigger: ACTGACATGAGGGTCTTCCCATGTTTTAACTGGAAA...CCCTGGAAACTCTAGCTGAAACCTGCCTTTCCTAATGCTCACACAAGCACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR CCA 90 bp TGTAGCATCTATCAGGAACTAAGCATCATCTTCCTTACCCAACTCACCCCATCTGCAAAGACTGGGGACTaGGTCTTTCTCGCAACTTCT +
Preference number: 2 (lower is better)
Translates to: CSIYQELSIIFLTQLTPSAKTGD*VFLATS
Trigger: AGAAGTTGCGAGAAAGACCCAGTCCCCAGTCTTTGC...AGATGGGGTGAGTTGGGTAAGGAAGATGATGCTTAGTTCCTGATAGATGCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR TCA 90 bp AGATTTAAAGGGGAGACTAGAGCTCAAGGTCAGGCATCTAGTGCGTGCTATTCTAGTTTCAGTCATGGCTaGTCTGCTTTTAAGAGGACC +
Preference number: 2 (lower is better)
Translates to: RFKGETRAQGQASSACYSSFSHG*SAFKRT
Trigger: GGTCCTCTTAAAAGCAGATCAGCCATGACTGAAACT...AGAATAGCACGCACTAGATGCCTGACCTTGAGCTCTAGTCTCCCCTTTAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR TCA 90 bp AGATTTAAAGGGGAGACTAGAGCTCAAGGTCAGGCATCTAGTGCGTGCTATTCTATACCAGCTAAGCCTTaGGTTTCAGTCATGGCTGAT +
Preference number: 2 (lower is better)
Translates to: RFKGETRAQGQASSACYSIPAKP*VSVMAD
Trigger: ATCAGCCATGACTGAAACTCAAGGCTTAGCTGGTAT...AGAATAGCACGCACTAGATGCCTGACCTTGAGCTCTAGTCTCCCCTTTAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR CCA 90 bp AGATTTAAAGGGGAGACTAGAGCTCAAGGTCAGGCATCTAGTGCGTGCTATTCTCAGCTGTGTCATACTTaGAATGTGACCAAAGTGGGT +
Preference number: 2 (lower is better)
Translates to: RFKGETRAQGQASSACYSQLCHT*NVTKVG
Trigger: ACCCACTTTGGTCACATTCCAAGTATGACACAGCTG...AGAATAGCACGCACTAGATGCCTGACCTTGAGCTCTAGTCTCCCCTTTAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR CCA 90 bp TGTAGCATCTATCAGGAACTAAGCATCATCTTCCTTACCCAACTCACCCCATCTAACACTGAAGCACACTaGGTCCCCTCAATTAGAACC +
Preference number: 2 (lower is better)
Translates to: CSIYQELSIIFLTQLTPSNTEAH*VPSIRT
Trigger: GGTTCTAATTGAGGGGACCCAGTGTGCTTCAGTGTT...AGATGGGGTGAGTTGGGTAAGGAAGATGATGCTTAGTTCCTGATAGATGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR CCA 90 bp AATTTGCACCAACTCTCACTAGCCCAGGCAAAACTCCAAGCATTTTATTTAGCTAATGGTGGCAAAGACTaGGGACTGGGTCTTTCTCGC +
Preference number: 2 (lower is better)
Translates to: NLHQLSLAQAKLQAFYLANGGKD*GLGLSR
Trigger: GCGAGAAAGACCCAGTCCCCAGTCTTTGCCACCATT...AGCTAAATAAAATGCTTGGAGTTTTGCCTGGGCTAGTGAGAGTTGGTGCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR TCA 90 bp GTCATGAATGACCAGATAGTTTCCAAAGTTGGGATCACTCTTCATTGGGGTTCACCGAAATTCCTGAATTaGGTTGCTGTCAAACACACC +
Preference number: 2 (lower is better)
Translates to: VMNDQIVSKVGITLHWGSPKFLN*VAVKHT
Trigger: GGTGTGTTTGACAGCAACTCAATTCAGGAATTTCGG...TGAACCCCAATGAAGAGTGATCCCAACTTTGGAAACTATCTGGTCATTCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR GCA 90 bp CTTCATTGCCCCACTCTTAACACTGAAGCACACTGGGTCCCCTCAATTAGAACCTCTACTAAGCTCTTTTaGATTAGGATAACTTCACTG +
Preference number: 2 (lower is better)
Translates to: LHCPTLNTEAHWVPSIRTSTKLF*IRITSL
Trigger: CAGTGAAGTTATCCTAATGCAAAAGAGCTTAGTAGA...GGTTCTAATTGAGGGGACCCAGTGTGCTTCAGTGTTAAGAGTGGGGCAATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CAA 90 bp CTAAAGCAGTTCCACAGGTCACTCAGTTCTACCGAAATTCCTGAATaGAGTTGCTGTCAAACACACCTGGAGAAGGAAGTCACTATTTTT +
Preference number: 2 (lower is better)
Translates to: LKQFHRSLSSTEIPE*SCCQTHLEKEVTIF
Trigger: AAAAATAGTGACTTCCTTCTCCAGGTGTGTTTGACAGCAACTCAATTCAGGAATTTCGGTAGAACTGAGTGACCTGTGGAACTGCTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR TCA 90 bp AGATTTAAAGGGGAGACTAGAGCTCAAGGTCAGGCATCTAGTGCGTGCTATTCTCTAATGTTTGGGACATaGCATGTTAGTGTCTATCTT +
Preference number: 2 (lower is better)
Translates to: RFKGETRAQGQASSACYSLMFGT*HVSVYL
Trigger: AAGATAGACACTAACATGTCATGTCCCAAACATTAG...AGAATAGCACGCACTAGATGCCTGACCTTGAGCTCTAGTCTCCCCTTTAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR TCA 90 bp TTTAGCTACTTCCTCTTTAGTAGATGGTCATCTCACCTTCCTATGCAAACACACTGTCAGTTACCACAATaGCTCTGGACTCAGCACAAT +
Preference number: 2 (lower is better)
Translates to: FSYFLFSRWSSHLPMQTHCQLPQ*LWTQHN
Trigger: ATTGTGCTGAGTCCAGAGTCATTGTGGTAACTGACA...GTGTGTTTGCATAGGAAGGTGAGATGACCATCTACTAAAGAGGAAGTAGCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR GCA 90 bp CACAAGAATTTGCACCAACTCTCACTAGCCCAGGCAAAACTCCAAGCATTTTATATTCCTGAATTGAGTTaGTGTCAAACACACCTGGAG +
Preference number: 2 (lower is better)
Translates to: HKNLHQLSLAQAKLQAFYIPELS*CQTHLE
Trigger: CTCCAGGTGTGTTTGACAGCAACTCAATTCAGGAAT...ATAAAATGCTTGGAGTTTTGCCTGGGCTAGTGAGAGTTGGTGCAAATTCTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR GCA 90 bp TGTAGCATCTATCAGGAACTAAGCATCATCTTCCTTACCCAACTCACCCCATCTTTTCTGTTAGGCAAGTaGTTATGTTGGTGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: CSIYQELSIIFLTQLTPSFLLGK*LCWWLH
Trigger: ATGAAGCCACCAACATAAGCACTTGCCTAACAGAAA...AGATGGGGTGAGTTGGGTAAGGAAGATGATGCTTAGTTCCTGATAGATGCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR CCA 90 bp TGTAGCATCTATCAGGAACTAAGCATCATCTTCCTTACCCAACTCACCCCATCTTATCTTGGAAAGATGTaGATAGGTCATGCTTCCTGT +
Preference number: 2 (lower is better)
Translates to: CSIYQELSIIFLTQLTPSYLGKM*IGHASC
Trigger: ACAGGAAGCATGACCTATCCACATCTTTCCAAGATA...AGATGGGGTGAGTTGGGTAAGGAAGATGATGCTTAGTTCCTGATAGATGCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR CCA 90 bp GGATGTGAATCTAACCTTGGAAACTGGATTCTTACAAAGTCCACCCAGAAGGTTGCTGTCAAACACACCTaGAGAAGGAAGTCACTATTT +
Preference number: 2 (lower is better)
Translates to: GCESNLGNWILTKSTQKVAVKHT*RRKSLF
Trigger: AAATAGTGACTTCCTTCTCCAGGTGTGTTTGACAGC...AACCTTCTGGGTGGACTTTGTAAGAATCCAGTTTCCAAGGTTAGATTCACATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR TCA 90 bp GTCATGAATGACCAGATAGTTTCCAAAGTTGGGATCACTCTTCATTGGGGTTCATTCTACCGAAATTCCTaGATTGAGTTGCTGTCAAAC +
Preference number: 2 (lower is better)
Translates to: VMNDQIVSKVGITLHWGSFYRNS*IELLSN
Trigger: GTTTGACAGCAACTCAATTCAGGAATTTCGGTAGAA...TGAACCCCAATGAAGAGTGATCCCAACTTTGGAAACTATCTGGTCATTCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR TCA 90 bp GGATGTGAATCTAACCTTGGAAACTGGATTCTTACAAAGTCCACCCAGAAGGTTCAAAAAGATCTGAGCTaGCTAAAAAGGTCAGGTGAA +
Preference number: 2 (lower is better)
Translates to: GCESNLGNWILTKSTQKVQKDLS*LKRSGE
Trigger: TTCACCTGACCTTTTTAGTCAGCTCAGATCTTTTTG...AACCTTCTGGGTGGACTTTGTAAGAATCCAGTTTCCAAGGTTAGATTCACATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR GCA 90 bp GTCATGAATGACCAGATAGTTTCCAAAGTTGGGATCACTCTTCATTGGGGTTCAAATATTGAGTGTCTCTaGCCTGAAGTGATGCTTTCT +
Preference number: 2 (lower is better)
Translates to: VMNDQIVSKVGITLHWGSNIECL*PEVMLS
Trigger: AGAAAGCATCACTTCAGGGCAGAGACACTCAATATT...TGAACCCCAATGAAGAGTGATCCCAACTTTGGAAACTATCTGGTCATTCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR GCA 90 bp CACAAGAATTTGCACCAACTCTCACTAGCCCAGGCAAAACTCCAAGCATTTTATCATCGGTCATTTTTGTaGAAACACATGCCATTTGAC +
Preference number: 2 (lower is better)
Translates to: HKNLHQLSLAQAKLQAFYHRSFL*KHMPFD
Trigger: GTCAAATGGCATGTGTTTGCACAAAAATGACCGATG...ATAAAATGCTTGGAGTTTTGCCTGGGCTAGTGAGAGTTGGTGCAAATTCTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR CCA 90 bp ATGCCGAAAGCATCAGAAAAAGAGTCAAATCAGAGTCCCGAAACAAATAAGAGAAATCACTCCGGGCTTTaGGTTTTCATAGCCAAAGGA +
Preference number: 2 (lower is better)
Translates to: MPKASEKESNQSPETNKRNHSGL*VFIAKG
Trigger: TCCTTTGGCTATGAAAACCCAAAGCCCGGAGTGATT...TCTCTTATTTGTTTCGGGACTCTGATTTGACTCTTTTTCTGATGCTTTCGGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR CCA 90 bp AGATTTAAAGGGGAGACTAGAGCTCAAGGTCAGGCATCTAGTGCGTGCTATTCTCACATTTCAAAGCTTTaGTTAAACACATCGGTCATT +
Preference number: 2 (lower is better)
Translates to: RFKGETRAQGQASSACYSHISKL*LNTSVI
Trigger: AATGACCGATGTGTTTAACCAAAGCTTTGAAATGTG...AGAATAGCACGCACTAGATGCCTGACCTTGAGCTCTAGTCTCCCCTTTAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR CCA 90 bp TGTAGCATCTATCAGGAACTAAGCATCATCTTCCTTACCCAACTCACCCCATCTTTAAAAGTACAGCTTTaGTCAGTGCAGCTTTTAACC +
Preference number: 2 (lower is better)
Translates to: CSIYQELSIIFLTQLTPSLKVQL*SVQLLT
Trigger: GGTTAAAAGCTGCACTGACCAAAGCTGTACTTTTAA...AGATGGGGTGAGTTGGGTAAGGAAGATGATGCTTAGTTCCTGATAGATGCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CAA 90 bp GTTAGGCAAGTGCTTATGTTGGTGGCTTCATCACATTTCAAAGCTTaGGTTAAACACATCGGTCATTTTTGTGCAAACACATGCCATTTG +
Preference number: 2 (lower is better)
Translates to: VRQVLMLVASSHFKA*VKHIGHFCANTCHL
Trigger: CAAATGGCATGTGTTTGCACAAAAATGACCGATGTGTTTAACCAAAGCTTTGAAATGTGATGAAGCCACCAACATAAGCACTTGCCTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR TCA 90 bp CACAAGAATTTGCACCAACTCTCACTAGCCCAGGCAAAACTCCAAGCATTTTATTTACCATTTTCTGCCTaGCTAAAATTGGTACAAGAG +
Preference number: 2 (lower is better)
Translates to: HKNLHQLSLAQAKLQAFYLPFSA*LKLVQE
Trigger: CTCTTGTACCAATTTTAGTCAGGCAGAAAATGGTAA...ATAAAATGCTTGGAGTTTTGCCTGGGCTAGTGAGAGTTGGTGCAAATTCTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CAA 90 bp TACCAGAAAGTAAACTACAAAGGAGTTATTCCTCAAGTTAGGAAGTaGCTTTTGAGTGGCACCATTTCCCAAAGTCAACAAAGCAGTACT +
Preference number: 2 (lower is better)
Translates to: YQKVNYKGVIPQVRK*LLSGTISQSQQSST
Trigger: AGTACTGCTTTGTTGACTTTGGGAAATGGTGCCACTCAAAAGCAACTTCCTAACTTGAGGAATAACTCCTTTGTAGTTTACTTTCTGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR CCA 90 bp CACAAGAATTTGCACCAACTCTCACTAGCCCAGGCAAAACTCCAAGCATTTTATTTTAACTGGTTGAATTaGAATATGTTCCAAAGCGAG +
Preference number: 2 (lower is better)
Translates to: HKNLHQLSLAQAKLQAFYFNWLN*NMFQSE
Trigger: CTCGCTTTGGAACATATTCCAATTCAACCAGTTAAA...ATAAAATGCTTGGAGTTTTGCCTGGGCTAGTGAGAGTTGGTGCAAATTCTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR GCA 90 bp CAGAAAAAGAGTCAAATCAGAGTCCCGAAACAAATAAGAGACTGCTTAACTTTAGGAATGATTTCAAAGTaGCTTGGAAGCTCCAATGCA +
Preference number: 2 (lower is better)
Translates to: QKKSQIRVPKQIRDCLTLGMISK*LGSSNA
Trigger: TGCATTGGAGCTTCCAAGGCACTTTGAAATCATTCC...TAAAGTTAAGCAGTCTCTTATTTGTTTCGGGACTCTGATTTGACTCTTTTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CCA 72 bp AAGTCCACCCAGAAGGTTTTCCCTGACACAGAGCCCTaGTCCGACACCCAGGAAGGAATGGCCTCTATGAGC +
Preference number: 3 (lower is better)
Translates to: KSTQKVFPDTEP*SDTQEGMASMS
Trigger: GCTCATAGAGGCCATTCCTTCCTGGGTGTCGGACCAGGGCTCTGTGTCAGGGAAAACCTTCTGGGTGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CCA 72 bp ACTCCGAGACAACCATGGTGCAATGGTGGCAAAGACTaGGGACTGGGTCTTTCTCGCAACTTCTGTGCCTCC +
Preference number: 3 (lower is better)
Translates to: TPRQPWCNGGKD*GLGLSRNFCAS
Trigger: GGAGGCACAGAAGTTGCGAGAAAGACCCAGTCCCCAGTCTTTGCCACCATTGCACCATGGTTGTCTCGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR TCA 72 bp CAGCACAACTTTCATGTAACTGCTGAGAATCCCAAGTaGGGGCCAACACAGCCTACCCGGGCTCAAGTGAGA +
Preference number: 3 (lower is better)
Translates to: QHNFHVTAENPK*GPTQPTRAQVR
Trigger: TCTCACTTGAGCCCGGGTAGGCTGTGTTGGCCCTCACTTGGGATTCTCAGCAGTTACATGAAAGTTGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR GCA 72 bp AAAAGGTCAGGTGAAGGGACTCCGAGACAACCATGGTaGAATGGTGGCAAAGACTGGGGACTGGGTCTTTCT +
Preference number: 3 (lower is better)
Translates to: KRSGEGTPRQPW*NGGKDWGLGLS
Trigger: AGAAAGACCCAGTCCCCAGTCTTTGCCACCATTGCACCATGGTTGTCTCGGAGTCCCTTCACCTGACCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CCA 72 bp CTAAAAAGGTCAGGTGAAGGGACTCCGAGACAACCATaGTGCAATGGTGGCAAAGACTGGGGACTGGGTCTT +
Preference number: 3 (lower is better)
Translates to: LKRSGEGTPRQP*CNGGKDWGLGL
Trigger: AAGACCCAGTCCCCAGTCTTTGCCACCATTGCACCATGGTTGTCTCGGAGTCCCTTCACCTGACCTTTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR GCA 72 bp AGTTGGGATCACTCTTCATTGGGGTTCACTCTTCATTaGCCCACTCTTAACACTGAAGCACACTGGGTCCCC +
Preference number: 3 (lower is better)
Translates to: SWDHSSLGFTLH*PTLNTEAHWVP
Trigger: GGGGACCCAGTGTGCTTCAGTGTTAAGAGTGGGGCAATGAAGAGTGAACCCCAATGAAGAGTGATCCCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR GCA 72 bp GGGGAGACTAGAGCTCAAGGTCAGGCATCTAGTGCGTaGTATTCTGCCAATGTGAGAGGAAAAGGTACTGTC +
Preference number: 3 (lower is better)
Translates to: GETRAQGQASSA*YSANVRGKGTV
Trigger: GACAGTACCTTTTCCTCTCACATTGGCAGAATAGCACGCACTAGATGCCTGACCTTGAGCTCTAGTCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CCA 72 bp GACAACCATGGTGCAATGGTGGCAAAGACTGGGGACTaGGTCTTTCTCGCAACTTCTGTGCCTCCTTTCATT +
Preference number: 3 (lower is better)
Translates to: DNHGAMVAKTGD*VFLATSVPPFI
Trigger: AATGAAAGGAGGCACAGAAGTTGCGAGAAAGACCCAGTCCCCAGTCTTTGCCACCATTGCACCATGGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CCA 72 bp ACTCTTCATTGCCCCACTCTTAACACTGAAGCACACTaGGTCCCCTCAATTAGAACCGGCCTTGACTCAAAG +
Preference number: 3 (lower is better)
Translates to: TLHCPTLNTEAH*VPSIRTGLDSK
Trigger: CTTTGAGTCAAGGCCGGTTCTAATTGAGGGGACCCAGTGTGCTTCAGTGTTAAGAGTGGGGCAATGAAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR TCA 72 bp GAGAAGAGATTATCAGCACAACTTTCATGTAACTGCTaGGAATCCCAAGTGAGGGCCAACACAGCCTACCCG +
Preference number: 3 (lower is better)
Translates to: EKRLSAQLSCNC*ESQVRANTAYP
Trigger: CGGGTAGGCTGTGTTGGCCCTCACTTGGGATTCTCAGCAGTTACATGAAAGTTGTGCTGATAATCTCTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR TCA 72 bp TGTGGGCCATCCCACAGGCATCCCCATCAGGAACTCTaGTTGGAAGGCATTAGTAATAGAGTTCAGTTTCAG +
Preference number: 3 (lower is better)
Translates to: CGPSHRHPHQEL*LEGISNRVQFQ
Trigger: CTGAAACTGAACTCTATTACTAATGCCTTCCAATCAGAGTTCCTGATGGGGATGCCTGTGGGATGGCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR GCA 72 bp CAAAGACTGGGGACTGGGTCTTTCTCGCAACTTCTGTaGCTCCTTTCATTCTCAGAAGAGGACTATTACCAG +
Preference number: 3 (lower is better)
Translates to: QRLGTGSFSQLL*LLSFSEEDYYQ
Trigger: CTGGTAATAGTCCTCTTCTGAGAATGAAAGGAGGCACAGAAGTTGCGAGAAAGACCCAGTCCCCAGTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR CAA 90 bp AATTTGCACCAACTCTCACTAGCCCAGGCAAAACTCCAAGCATTTTATTTAGCTAGAGCCCTAGCCCTATaGGGGTTCCCACTGTGGAAA +
Preference number: 3 (lower is better)
Translates to: NLHQLSLAQAKLQAFYLARALAL*GFPLWK
Trigger: TTTCCACAGTGGGAACCCCAATAGGGCTAGGGCTCT...AGCTAAATAAAATGCTTGGAGTTTTGCCTGGGCTAGTGAGAGTTGGTGCAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR CAA 90 bp CTTCATTGCCCCACTCTTAACACTGAAGCACACTGGGTCCCCTCAATTAGAACCACCGAAATTCCTGAATaGAGTTGCTGTCAAACACAC +
Preference number: 3 (lower is better)
Translates to: LHCPTLNTEAHWVPSIRTTEIPE*SCCQTH
Trigger: GTGTGTTTGACAGCAACTCAATTCAGGAATTTCGGT...GGTTCTAATTGAGGGGACCCAGTGTGCTTCAGTGTTAAGAGTGGGGCAATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR TCA 72 bp TGGCACTGTAATACGGGTCCTTTGAGGGTTGGCTCATaGTACACTGTAGACCCATTCCAATGGGTACACAAA +
Preference number: 3 (lower is better)
Translates to: WHCNTGPLRVGS*YTVDPFQWVHK
Trigger: TTTGTGTACCCATTGGAATGGGTCTACAGTGTATCATGAGCCAACCCTCAAAGGACCCGTATTACAGTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR TCA 72 bp GCAGTTCCACAGGTCACTCAGTTCTACCGAAATTCCTaGATTGAGTTGCTGTCAAACACACCTGGAGAAGGA +
Preference number: 3 (lower is better)
Translates to: AVPQVTQFYRNS*IELLSNTPGEG
Trigger: TCCTTCTCCAGGTGTGTTTGACAGCAACTCAATTCAGGAATTTCGGTAGAACTGAGTGACCTGTGGAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR TCA 72 bp ACTACAAAAAGATCTGAGCTGACTAAAAAGGTCAGGTaGAGGGACTCCGAGACAACCATGGTGCAATGGTGG +
Preference number: 3 (lower is better)
Translates to: TTKRSELTKKVR*RDSETTMVQWW
Trigger: CCACCATTGCACCATGGTTGTCTCGGAGTCCCTTCACCTGACCTTTTTAGTCAGCTCAGATCTTTTTGTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR GCA 72 bp AGTGAGAAAACAAGTAGCTTAGCACTTCTCACGCGCTaGCCAAATTCTCCCAATCTCGATTACTGCACAGAG +
Preference number: 3 (lower is better)
Translates to: SEKTSSLALLTR*PNSPNLDYCTE
Trigger: CTCTGTGCAGTAATCGAGATTGGGAGAATTTGGGCAGCGCGTGAGAAGTGCTAAGCTACTTGTTTTCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CCA 72 bp ATGGCCTCTATGAGCGTCAGGGTCTCGTCTCACCATTaGATAACTACTTTGCTCTCAAAAAGAGGACATTTG +
Preference number: 3 (lower is better)
Translates to: MASMSVRVSSHH*ITTLLSKRGHL
Trigger: CAAATGTCCTCTTTTTGAGAGCAAAGTAGTTATCCAATGGTGAGACGAGACCCTGACGCTCATAGAGGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR CAA 90 bp CAAGTGCTTATGTTGGTGGCTTCATCACATTTCAAAGCTTTGGTTAAACACATCAGCTGGCTGGCAATATaGAGTGTCTCTGCCCTGAAG +
Preference number: 3 (lower is better)
Translates to: QVLMLVASSHFKALVKHISWLAI*SVSALK
Trigger: CTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCT...GATGTGTTTAACCAAAGCTTTGAAATGTGATGAAGCCACCAACATAAGCACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR TCA 72 bp ACAGAGCTCAACCCCCACGTGCTAATGTTTGGGACATaGCATGTTAGTGTCTATCTTGGAAAGATGTGGATA +
Preference number: 3 (lower is better)
Translates to: TELNPHVLMFGT*HVSVYLGKMWI
Trigger: TATCCACATCTTTCCAAGATAGACACTAACATGTCATGTCCCAAACATTAGCACGTGGGGGTTGAGCTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CCA 72 bp TCTTCCCAAATATACTGGAATGATTTCAAAGTGCCTTaGAAGCTCCAATGCACACAAGGCCAGACTTCATGC +
Preference number: 3 (lower is better)
Translates to: SSQIYWNDFKVP*KLQCTQGQTSC
Trigger: GCATGAAGTCTGGCCTTGTGTGCATTGGAGCTTCCAAGGCACTTTGAAATCATTCCAGTATATTTGGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CCA 72 bp ATGCAGATCTTATCTTCATCTGGTGCCTCATTACCCTaGGCCCCAAGCCTTCTAAGTAGAAGAAATACTGAT +
Preference number: 3 (lower is better)
Translates to: MQILSSSGASLP*APSLLSRRNTD
Trigger: ATCAGTATTTCTTCTACTTAGAAGGCTTGGGGCCCAGGGTAATGAGGCACCAGATGAAGATAAGATCTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR CAA 90 bp TTAGAACCCAAGCTGGCTGGCAATATTGAGTGTCTCTGCCCTGAAGTGATGCTTATTGGCTTTGGTTTATaGATGAATGACATTCTCCAC +
Preference number: 3 (lower is better)
Translates to: LEPKLAGNIECLCPEVMLIGFGL*MNDILH
Trigger: GTGGAGAATGTCATTCATCAATAAACCAAAGCCAAT...AAGCATCACTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCTTGGGTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR CAA 90 bp TTTAGCTACTTCCTCTTTAGTAGATGGTCATCTCACCTTCCTATGCAAACACACACAGCTGTGTCATACTaGGAATGTGACCAAAGTGGG +
Preference number: 3 (lower is better)
Translates to: FSYFLFSRWSSHLPMQTHTAVSY*ECDQSG
Trigger: CCCACTTTGGTCACATTCCAAGTATGACACAGCTGT...GTGTGTTTGCATAGGAAGGTGAGATGACCATCTACTAAAGAGGAAGTAGCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR GCA 72 bp AGGTCACTCAGTTCTACCGAAATTCCTGAATTGAGTTaGTGTCAAACACACCTGGAGAAGGAAGTCACTATT +
Preference number: 3 (lower is better)
Translates to: RSLSSTEIPELS*CQTHLEKEVTI
Trigger: AATAGTGACTTCCTTCTCCAGGTGTGTTTGACAGCAACTCAATTCAGGAATTTCGGTAGAACTGAGTGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CCA 72 bp TTGGAATGTGACCAAAGTGGGTTTCCAGTTAAAACATaGGAAGACCCTCATGTCAGTTACCACAATGACTCT +
Preference number: 3 (lower is better)
Translates to: LECDQSGFPVKT*EDPHVSYHNDS
Trigger: AGAGTCATTGTGGTAACTGACATGAGGGTCTTCCCATGTTTTAACTGGAAACCCACTTTGGTCACATTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR CAA 90 bp AGATTTAAAGGGGAGACTAGAGCTCAAGGTCAGGCATCTAGTGCGTGCTATTCTTCACATTTCAAAGCTTaGGTTAAACACATCGGTCAT +
Preference number: 3 (lower is better)
Translates to: RFKGETRAQGQASSACYSSHFKA*VKHIGH
Trigger: ATGACCGATGTGTTTAACCAAAGCTTTGAAATGTGA...AGAATAGCACGCACTAGATGCCTGACCTTGAGCTCTAGTCTCCCCTTTAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR CAA 90 bp CAGAAAAAGAGTCAAATCAGAGTCCCGAAACAAATAAGAGACTGCTTAACTTTACAATCACTCCGGGCTTaGGGTTTTCATAGCCAAAGG +
Preference number: 3 (lower is better)
Translates to: QKKSQIRVPKQIRDCLTLQSLRA*GFHSQR
Trigger: CCTTTGGCTATGAAAACCCAAAGCCCGGAGTGATTG...TAAAGTTAAGCAGTCTCTTATTTGTTTCGGGACTCTGATTTGACTCTTTTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR CAA 90 bp TGTAGCATCTATCAGGAACTAAGCATCATCTTCCTTACCCAACTCACCCCATCTTTTAAAAGTACAGCTTaGGTCAGTGCAGCTTTTAAC +
Preference number: 3 (lower is better)
Translates to: CSIYQELSIIFLTQLTPSFKSTA*VSAAFN
Trigger: GTTAAAAGCTGCACTGACCAAAGCTGTACTTTTAAA...AGATGGGGTGAGTTGGGTAAGGAAGATGATGCTTAGTTCCTGATAGATGCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR TCA 72 bp GTCACAAGAGCACCCTCATGTTTACCATTTTCTGCCTaGCTAAAATTGGTACAAGAGAAGAGATTATCAGCA +
Preference number: 3 (lower is better)
Translates to: VTRAPSCLPFSA*LKLVQEKRLSA
Trigger: TGCTGATAATCTCTTCTCTTGTACCAATTTTAGTCAGGCAGAAAATGGTAAACATGAGGGTGCTCTTGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR TCA 72 bp AATAGGTCTATTCTCAAACTACAAAAAGATCTGAGCTaGCTAAAAAGGTCAGGTGAAGGGACTCCGAGACAA +
Preference number: 3 (lower is better)
Translates to: NRSILKLQKDLS*LKRSGEGTPRQ
Trigger: TTGTCTCGGAGTCCCTTCACCTGACCTTTTTAGTCAGCTCAGATCTTTTTGTAGTTTGAGAATAGACCTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR TCA 72 bp ACAAAGGAGTTATTCCTCAAGTTAGGAAGTTGCTTTTaGGTGGCACCATTTCCCAAAGTCAACAAAGCAGTA +
Preference number: 3 (lower is better)
Translates to: TKELFLKLGSCF*VAPFPKVNKAV
Trigger: TACTGCTTTGTTGACTTTGGGAAATGGTGCCACTCAAAAGCAACTTCCTAACTTGAGGAATAACTCCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR-3UTR CAA 90 bp TTTAGCTACTTCCTCTTTAGTAGATGGTCATCTCACCTTCCTATGCAAACACACCATTGGATAACTACTTaGCTCTCAAAAAGAGGACAT +
Preference number: 3 (lower is better)
Translates to: FSYFLFSRWSSHLPMQTHHWITT*LSKRGH
Trigger: ATGTCCTCTTTTTGAGAGCAAAGTAGTTATCCAATG...GTGTGTTTGCATAGGAAGGTGAGATGACCATCTACTAAAGAGGAAGTAGCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR GCA 72 bp CTTAACTTTAGATTAGAACTTGCATGTGAACTTCAGTaGTCTCTGCTACTGCCAAGTTTCATGTTACTCAAC +
Preference number: 3 (lower is better)
Translates to: LNFRLELACELQ*SLLLPSFMLLN
Trigger: GTTGAGTAACATGAAACTTGGCAGTAGCAGAGAGCACTGAAGTTCACATGCAAGTTCTAATCTAAAGTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR GCA 72 bp TTAAGTCACAAGAGCACCCTCATGTTTACCATTTTCTaGCTGACTAAAATTGGTACAAGAGAAGAGATTATC +
Preference number: 3 (lower is better)
Translates to: LSHKSTLMFTIF*LTKIGTREEII
Trigger: GATAATCTCTTCTCTTGTACCAATTTTAGTCAGGCAGAAAATGGTAAACATGAGGGTGCTCTTGTGACTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CAA 72 bp AGAAGGAGGCTCCCCTACCTGAGAGCCCTAGCCCTATaGGGGTTCCCACTGTGGAAACCCTCAGGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: RRRLPYLRALAL*GFPLWKPSGLK
Trigger: CTTGAGACCTGAGGGTTTCCACAGTGGGAACCCCAATAGGGCTAGGGCTCTCAGGTAGGGGAGCCTCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp CTTCATTGCCCCACTCTTAACACTGAAGCACACTGGGTCCCCTCAATTAGAACCCAGGTCCCCCAGGTGTaGGCCATCCCACAGGCATCC +
Preference number: 4 (lower is better)
Translates to: LHCPTLNTEAHWVPSIRTQVPQV*AIPQAS
Trigger: GGATGCCTGTGGGATGGCCCACACCTGGGGGACCTG...GGTTCTAATTGAGGGGACCCAGTGTGCTTCAGTGTTAAGAGTGGGGCAATGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp CAACCTGACTCCAAGCAGCAGGCTAGGAGAACAGGCTGCAGACATGCCGAAAGCAATGGTGGCAAAGACTaGGGACTGGGTCTTTCTCGC +
Preference number: 4 (lower is better)
Translates to: QPDSKQQARRTGCRHAESNGGKD*GLGLSR
Trigger: GCGAGAAAGACCCAGTCCCCAGTCTTTGCCACCATT...GCTTTCGGCATGTCTGCAGCCTGTTCTCCTAGCCTGCTGCTTGGAGTCAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp CTTCATTGCCCCACTCTTAACACTGAAGCACACTGGGTCCCCTCAATTAGAACCTGCAGCCGGCTAACCTaGTCCCAGTTGAGCACGCTG +
Preference number: 4 (lower is better)
Translates to: LHCPTLNTEAHWVPSIRTCSRLT*SQLSTL
Trigger: CAGCGTGCTCAACTGGGATCAGGTTAGCCGGCTGCA...GGTTCTAATTGAGGGGACCCAGTGTGCTTCAGTGTTAAGAGTGGGGCAATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp GGAAAGATGTGGATAGGTCATGCTTCCTGTAGCGTTTTCCAACGTGGCACTGTAGGACGTCGTGCACTTTaGTGCCTGCCTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GKMWIGHASCSVFQRGTVGRRAL*CLPPPA
Trigger: GGCTGGAGGAGGCAGGCATCAAAGTGCACGACGTCC...TACAGTGCCACGTTGGAAAACGCTACAGGAAGCATGACCTATCCACATCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp CCCAAGCTGGCTGGCAATATTGAGTGTCTCTGCCCTGAAGTGATGCTTTCTAAGAGGCCAGGAGGGAGATaGGGTTCAGAGTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: PKLAGNIECLCPEVMLSKRPGGR*GSESAC
Trigger: GCAGGCAGACTCTGAACCTCATCTCCCTCCTGGCCT...CTTAGAAAGCATCACTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp CCCAAGCTGGCTGGCAATATTGAGTGTCTCTGCCCTGAAGTGATGCTTTCTAAGGTGCACTTTGATGCCTaGCTCCTCCAGCCGACTGCG +
Preference number: 4 (lower is better)
Translates to: PKLAGNIECLCPEVMLSKVHFDA*LLQPTA
Trigger: CGCAGTCGGCTGGAGGAGGCAGGCATCAAAGTGCAC...CTTAGAAAGCATCACTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp TTAGAACCCAAGCTGGCTGGCAATATTGAGTGTCTCTGCCCTGAAGTGATGCTTCCAACTCACCCCATCTaGCAGGTCCCCCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LEPKLAGNIECLCPEVMLPTHPI*QVPQVW
Trigger: CCACACCTGGGGGACCTGGCAGATGGGGTGAGTTGG...AAGCATCACTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCTTGGGTTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp AGATTTAAAGGGGAGACTAGAGCTCAAGGTCAGGCATCTAGTGCGTGCTATTCTACAGAGGCAGGTCCTTaGCGTGGGCAGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: RFKGETRAQGQASSACYSTEAGP*RGQAPA
Trigger: TGCTGGGGCCTGCCCACGCCAAGGACCTGCCTCTGT...AGAATAGCACGCACTAGATGCCTGACCTTGAGCTCTAGTCTCCCCTTTAAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp GCAAAGACTGGGGACTGGGTCTTTCTCGCAACTTCTGTGCCTCCTTTCATTCTCTGGTGGCACTGGGGATaGTGTTTTGTTCCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: AKTGDWVFLATSVPPFILWWHWG*CFVPPA
Trigger: TGCTGGCGGAACAAAACATCATCCCCAGTGCCACCA...GAGAATGAAAGGAGGCACAGAAGTTGCGAGAAAGACCCAGTCCCCAGTCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp GCAAAGACTGGGGACTGGGTCTTTCTCGCAACTTCTGTGCCTCCTTTCATTCTCTCTGGCTGGGGAAACTaGGCAATAGAAGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: AKTGDWVFLATSVPPFILSGWGN*AIEEEA
Trigger: CGCCTCCTCTTCTATTGCCCAGTTTCCCCAGCCAGA...GAGAATGAAAGGAGGCACAGAAGTTGCGAGAAAGACCCAGTCCCCAGTCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp GGAAAGATGTGGATAGGTCATGCTTCCTGTAGCGTTTTCCAACGTGGCACTGTACCTGACACAGAGCCCTaGTCCGACACCCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: GKMWIGHASCSVFQRGTVPDTEP*SDTQEG
Trigger: TCCTTCCTGGGTGTCGGACCAGGGCTCTGTGTCAGG...TACAGTGCCACGTTGGAAAACGCTACAGGAAGCATGACCTATCCACATCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp TTAGAACCCAAGCTGGCTGGCAATATTGAGTGTCTCTGCCCTGAAGTGATGCTTAAGGCTGGCTGTAGGTaGCTGGAGGATGGGCAACGT +
Preference number: 4 (lower is better)
Translates to: LEPKLAGNIECLCPEVMLKAGCR*LEDGQR
Trigger: ACGTTGCCCATCCTCCAGTCACCTACAGCCAGCCTT...AAGCATCACTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCTTGGGTTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp CCCAAGCTGGCTGGCAATATTGAGTGTCTCTGCCCTGAAGTGATGCTTTCTAAGAAGGAATGGCCTCTATaGGCGTCAGGGTCTCGTCTC +
Preference number: 4 (lower is better)
Translates to: PKLAGNIECLCPEVMLSKKEWPL*ASGSRL
Trigger: GAGACGAGACCCTGACGCTCATAGAGGCCATTCCTT...CTTAGAAAGCATCACTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp TTAGAACCCAAGCTGGCTGGCAATATTGAGTGTCTCTGCCCTGAAGTGATGCTTGAAGTCCCCCGCCTCTaGTTTCTTCTGGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LEPKLAGNIECLCPEVMLEVPRL*FLLGSW
Trigger: CCAAGAACCCAGAAGAAATCAGAGGCGGGGGACTTC...AAGCATCACTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCTTGGGTTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp CCTGGTGCTTGTGTGAGCATTAGGAAAGGCAGGTTTCAGCTAGAGTTTCCAGGGTTACCTCGCCTATTCTaGGGCTGGCAAAAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: PGACVSIRKGRFQLEFPGLPRLF*GWQKAH
Trigger: ATGAGCCTTTTGCCAGCCTCAGAATAGGCGAGGTAA...CCCTGGAAACTCTAGCTGAAACCTGCCTTTCCTAATGCTCACACAAGCACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp CTTCATTGCCCCACTCTTAACACTGAAGCACACTGGGTCCCCTCAATTAGAACCGAGTTTCCAGGGCCCTaGAATTCAAGGTTACCTCGC +
Preference number: 4 (lower is better)
Translates to: LHCPTLNTEAHWVPSIRTEFPGP*NSRLPR
Trigger: GCGAGGTAACCTTGAATTTCAGGGCCCTGGAAACTC...GGTTCTAATTGAGGGGACCCAGTGTGCTTCAGTGTTAAGAGTGGGGCAATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp ACTCCAGAAGAACAGCTGTGTCATACTTGGAATGTGACCAAAGTGGGTTTCCAGCCAGAAGGTTTTCCCTaGCACAGAGCCCTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: TPEEQLCHTWNVTKVGFQPEGFP*HRALVR
Trigger: TCGGACCAGGGCTCTGTGTCAGGGAAAACCTTCTGG...CTGGAAACCCACTTTGGTCACATTCCAAGTATGACACAGCTGTTCTTCTGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp TTAGAACCCAAGCTGGCTGGCAATATTGAGTGTCTCTGCCCTGAAGTGATGCTTCAAAGTCCCCGTACATaGTCTCCCCAATCACGGTGG +
Preference number: 4 (lower is better)
Translates to: LEPKLAGNIECLCPEVMLQSPRT*SPQSRW
Trigger: CCACCGTGATTGGGGAGAGCATGTACGGGGACTTTG...AAGCATCACTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCTTGGGTTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp CAACCTGACTCCAAGCAGCAGGCTAGGAGAACAGGCTGCAGACATGCCGAAAGCATTCCTGAATTGAGTTaGTGTCAAACACACCTGGAG +
Preference number: 4 (lower is better)
Translates to: QPDSKQQARRTGCRHAESIPELS*CQTHLE
Trigger: CTCCAGGTGTGTTTGACAGCAACTCAATTCAGGAAT...GCTTTCGGCATGTCTGCAGCCTGTTCTCCTAGCCTGCTGCTTGGAGTCAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp CTTCATTGCCCCACTCTTAACACTGAAGCACACTGGGTCCCCTCAATTAGAACCGCTAGGAGAACAGGCTaGAGACATGCCGAAAGCATC +
Preference number: 4 (lower is better)
Translates to: LHCPTLNTEAHWVPSIRTARRTG*RHAESI
Trigger: GATGCTTTCGGCATGTCTGCAGCCTGTTCTCCTAGC...GGTTCTAATTGAGGGGACCCAGTGTGCTTCAGTGTTAAGAGTGGGGCAATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp GCAAAGACTGGGGACTGGGTCTTTCTCGCAACTTCTGTGCCTCCTTTCATTCTCACTCCGAGACAACCATaGTGCAATGGTGGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: AKTGDWVFLATSVPPFILTPRQP*CNGGKD
Trigger: GTCTTTGCCACCATTGCACCATGGTTGTCTCGGAGT...GAGAATGAAAGGAGGCACAGAAGTTGCGAGAAAGACCCAGTCCCCAGTCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp CACAAGAATTTGCACCAACTCTCACTAGCCCAGGCAAAACTCCAAGCATTTTATCCTGGTCTGTGGGCCTaGAGTCCCGCACAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: HKNLHQLSLAQAKLQAFYPGLWA*SPAQEG
Trigger: ACCTTCTTGTGCGGGACTTCAGGCCCACAGACCAGG...ATAAAATGCTTGGAGTTTTGCCTGGGCTAGTGAGAGTTGGTGCAAATTCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp GCAAAGACTGGGGACTGGGTCTTTCTCGCAACTTCTGTGCCTCCTTTCATTCTCAGCGCTCTAGAGTTTTaGTTTCTTCCTGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: AKTGDWVFLATSVPPFILSALEF*FLPGLW
Trigger: CCACAGACCAGGAAGAAATCAAAACTCTAGAGCGCT...GAGAATGAAAGGAGGCACAGAAGTTGCGAGAAAGACCCAGTCCCCAGTCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp GCAAAGACTGGGGACTGGGTCTTTCTCGCAACTTCTGTGCCTCCTTTCATTCTCGTAATACGGGTCCTTTaGGGGTTGGCTCATGATACA +
Preference number: 4 (lower is better)
Translates to: AKTGDWVFLATSVPPFILVIRVL*GLAHDT
Trigger: TGTATCATGAGCCAACCCTCAAAGGACCCGTATTAC...GAGAATGAAAGGAGGCACAGAAGTTGCGAGAAAGACCCAGTCCCCAGTCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp TGTAGCATCTATCAGGAACTAAGCATCATCTTCCTTACCCAACTCACCCCATCTGCTGAGAATCCCAAGTaGGGGCCAACACAGCCTACC +
Preference number: 4 (lower is better)
Translates to: CSIYQELSIIFLTQLTPSAENPK*GPTQPT
Trigger: GGTAGGCTGTGTTGGCCCTCACTTGGGATTCTCAGC...AGATGGGGTGAGTTGGGTAAGGAAGATGATGCTTAGTTCCTGATAGATGCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp TTAGAACCCAAGCTGGCTGGCAATATTGAGTGTCTCTGCCCTGAAGTGATGCTTACAGCTGCTCTCCTCTaGCATCTTCAGGGGATGTTC +
Preference number: 4 (lower is better)
Translates to: LEPKLAGNIECLCPEVMLTAALL*HLQGMF
Trigger: GAACATCCCCTGAAGATGGCAGAGGAGAGCAGCTGT...AAGCATCACTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCTTGGGTTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp GCAAAGACTGGGGACTGGGTCTTTCTCGCAACTTCTGTGCCTCCTTTCATTCTCAACCAGCTGAAATTCTaGCTCTGTTGGAAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: AKTGDWVFLATSVPPFILNQLKF*LCWKSH
Trigger: GTGGCTCTTCCAACAGAGGCAGAATTTCAGCTGGTT...GAGAATGAAAGGAGGCACAGAAGTTGCGAGAAAGACCCAGTCCCCAGTCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp GGAAAGATGTGGATAGGTCATGCTTCCTGTAGCGTTTTCCAACGTGGCACTGTAGTCTCCAACTTCCTCTaGTGTTCAAGGATGTCCGGG +
Preference number: 4 (lower is better)
Translates to: GKMWIGHASCSVFQRGTVVSNFL*CSRMSG
Trigger: CCCGGACATCCTTGAACAGCAGAGGAAGTTGGAGAC...TACAGTGCCACGTTGGAAAACGCTACAGGAAGCATGACCTATCCACATCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp AGATTTAAAGGGGAGACTAGAGCTCAAGGTCAGGCATCTAGTGCGTGCTATTCTCCAAGCCATTGTCTTTaGCCAAAACGTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RFKGETRAQGQASSACYSPSHCL*PKRGQL
Trigger: CAGCTGGCCACGTTTTGGTCAAAGACAATGGCTTGG...AGAATAGCACGCACTAGATGCCTGACCTTGAGCTCTAGTCTCCCCTTTAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp GTCATGAATGACCAGATAGTTTCCAAAGTTGGGATCACTCTTCATTGGGGTTCAGCTGGTAGTAACAGGTaGCGTTGGTGGCACTGGGGA +
Preference number: 4 (lower is better)
Translates to: VMNDQIVSKVGITLHWGSAGSNR*RWWHWG
Trigger: TCCCCAGTGCCACCAACGTCACCTGTTACTACCAGC...TGAACCCCAATGAAGAGTGATCCCAACTTTGGAAACTATCTGGTCATTCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp ATGCCGAAAGCATCAGAAAAAGAGTCAAATCAGAGTCCCGAAACAAATAAGAGACCTCCTCCAGCCGACTaGGGACGGTCTGGACGATGT +
Preference number: 4 (lower is better)
Translates to: MPKASEKESNQSPETNKRPPPAD*GRSGRC
Trigger: ACATCGTCCAGACCGTCCGCAGTCGGCTGGAGGAGG...TCTCTTATTTGTTTCGGGACTCTGATTTGACTCTTTTTCTGATGCTTTCGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp AGATTTAAAGGGGAGACTAGAGCTCAAGGTCAGGCATCTAGTGCGTGCTATTCTCCGAGACAACCATGGTaGAATGGTGGCAAAGACTGG +
Preference number: 4 (lower is better)
Translates to: RFKGETRAQGQASSACYSPRQPW*NGGKDW
Trigger: CCAGTCTTTGCCACCATTGCACCATGGTTGTCTCGG...AGAATAGCACGCACTAGATGCCTGACCTTGAGCTCTAGTCTCCCCTTTAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp GCAAAGACTGGGGACTGGGTCTTTCTCGCAACTTCTGTGCCTCCTTTCATTCTCAATCACTCCGGGCTTTaGGTTTTCATAGCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: AKTGDWVFLATSVPPFILNHSGL*VFIAKG
Trigger: TCCTTTGGCTATGAAAACCCAAAGCCCGGAGTGATT...GAGAATGAAAGGAGGCACAGAAGTTGCGAGAAAGACCCAGTCCCCAGTCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp AGAATCAGAGCTGAGTTCCCCTTTAAAAGCCAAATGCCTACATCTAGAAGGAGGCCCTGCGAAGGATCATaGGGTAGTCGTACTTGCTTC +
Preference number: 4 (lower is better)
Translates to: RIRAEFPFKSQMPTSRRRPCEGS*GSRTCF
Trigger: GAAGCAAGTACGACTACCTCATGATCCTTCGCAGGG...CCTCCTTCTAGATGTAGGCATTTGGCTTTTAAAGGGGAACTCAGCTCTGATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp ACTCCAGAAGAACAGCTGTGTCATACTTGGAATGTGACCAAAGTGGGTTTCCAGACTAAAAAGGTCAGGTaGAGGGACTCCGAGACAACC +
Preference number: 4 (lower is better)
Translates to: TPEEQLCHTWNVTKVGFQTKKVR*RDSETT
Trigger: GGTTGTCTCGGAGTCCCTTCACCTGACCTTTTTAGT...CTGGAAACCCACTTTGGTCACATTCCAAGTATGACACAGCTGTTCTTCTGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp GCAAAGACTGGGGACTGGGTCTTTCTCGCAACTTCTGTGCCTCCTTTCATTCTCATTAGAACTTGCATGTaGACTTCAGTGCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: AKTGDWVFLATSVPPFILIRTCM*TSVLSA
Trigger: AGCAGAGAGCACTGAAGTTCACATGCAAGTTCTAAT...GAGAATGAAAGGAGGCACAGAAGTTGCGAGAAAGACCCAGTCCCCAGTCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp AGATTTAAAGGGGAGACTAGAGCTCAAGGTCAGGCATCTAGTGCGTGCTATTCTAATCCCTGGTACAGCTaGTCTCCTCTGCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: RFKGETRAQGQASSACYSNPWYS*SPLPSS
Trigger: TGAAGATGGCAGAGGAGAGCAGCTGTACCAGGGATT...AGAATAGCACGCACTAGATGCCTGACCTTGAGCTCTAGTCTCCCCTTTAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp TTTAGCTACTTCCTCTTTAGTAGATGGTCATCTCACCTTCCTATGCAAACACACTTCAGCCGGACGTCGTaGACTTTGATGCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: FSYFLFSRWSSHLPMQTHFSRTS*TLMPAS
Trigger: GGAGGCAGGCATCAAAGTGCACGACGTCCGGCTGAA...GTGTGTTTGCATAGGAAGGTGAGATGACCATCTACTAAAGAGGAAGTAGCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp TTAGAACCCAAGCTGGCTGGCAATATTGAGTGTCTCTGCCCTGAAGTGATGCTTGCGATCAGTCTGTTCTaGAGATGGTCAAAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LEPKLAGNIECLCPEVMLAISLF*RWSKAS
Trigger: GGAAGCTTTTGACCATCTGCAGAACAGACTGATCGC...AAGCATCACTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCTTGGGTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp TGTAGCATCTATCAGGAACTAAGCATCATCTTCCTTACCCAACTCACCCCATCTGCACTTCTCACGCGCTaGCCAAATTCTCCCAATCTC +
Preference number: 4 (lower is better)
Translates to: CSIYQELSIIFLTQLTPSALLTR*PNSPNL
Trigger: GAGATTGGGAGAATTTGGGCAGCGCGTGAGAAGTGC...AGATGGGGTGAGTTGGGTAAGGAAGATGATGCTTAGTTCCTGATAGATGCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp ACTCCAGAAGAACAGCTGTGTCATACTTGGAATGTGACCAAAGTGGGTTTCCAGAGGGGATGTTCTGGCTaGGGAAACTGGGCAATAGAA +
Preference number: 4 (lower is better)
Translates to: TPEEQLCHTWNVTKVGFQRGCSG*GNWAIE
Trigger: TTCTATTGCCCAGTTTCCCCAGCCAGAACATCCCCT...CTGGAAACCCACTTTGGTCACATTCCAAGTATGACACAGCTGTTCTTCTGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp TGTAGCATCTATCAGGAACTAAGCATCATCTTCCTTACCCAACTCACCCCATCTAGGACATGCAATCCCTaGTACAGCTGCTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CSIYQELSIIFLTQLTPSRTCNP*YSCSPL
Trigger: CAGAGGAGAGCAGCTGTACCAGGGATTGCATGTCCT...AGATGGGGTGAGTTGGGTAAGGAAGATGATGCTTAGTTCCTGATAGATGCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp GGAAAGATGTGGATAGGTCATGCTTCCTGTAGCGTTTTCCAACGTGGCACTGTAAAGTTGCCTCGTCCGTaGATAGGTACAACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: GKMWIGHASCSVFQRGTVKLPRP*IGTTSV
Trigger: CACTGAAGTTGTACCTATCCACGGACGAGGCAACTT...TACAGTGCCACGTTGGAAAACGCTACAGGAAGCATGACCTATCCACATCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp CACAAGAATTTGCACCAACTCTCACTAGCCCAGGCAAAACTCCAAGCATTTTATCGACTGCGGACGGTCTaGACGATGTCCTTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: HKNLHQLSLAQAKLQAFYRLRTV*TMSFRV
Trigger: AACTCTGAAGGACATCGTCCAGACCGTCCGCAGTCG...ATAAAATGCTTGGAGTTTTGCCTGGGCTAGTGAGAGTTGGTGCAAATTCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp AGATTTAAAGGGGAGACTAGAGCTCAAGGTCAGGCATCTAGTGCGTGCTATTCTCTTGTTCACACCCTCTaGCAGGAAGTTCAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: RFKGETRAQGQASSACYSLVHTL*QEVQKG
Trigger: TCCCTTCTGAACTTCCTGCCAGAGGGTGTGAACAAG...AGAATAGCACGCACTAGATGCCTGACCTTGAGCTCTAGTCTCCCCTTTAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp GCAAAGACTGGGGACTGGGTCTTTCTCGCAACTTCTGTGCCTCCTTTCATTCTCGGAAGTGCTCAGAGATaGGATTATTGGAACAGTCAT +
Preference number: 4 (lower is better)
Translates to: AKTGDWVFLATSVPPFILGSAQR*DYWNSH
Trigger: ATGACTGTTCCAATAATCCCATCTCTGAGCACTTCC...GAGAATGAAAGGAGGCACAGAAGTTGCGAGAAAGACCCAGTCCCCAGTCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp CACAAGAATTTGCACCAACTCTCACTAGCCCAGGCAAAACTCCAAGCATTTTATCCAATCACGGTGGGGTaGAAGTGCTCAGAGATGGGA +
Preference number: 4 (lower is better)
Translates to: HKNLHQLSLAQAKLQAFYPITVG*KCSEMG
Trigger: TCCCATCTCTGAGCACTTCCACCCCACCGTGATTGG...ATAAAATGCTTGGAGTTTTGCCTGGGCTAGTGAGAGTTGGTGCAAATTCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp TGTAGCATCTATCAGGAACTAAGCATCATCTTCCTTACCCAACTCACCCCATCTCTGGCTGTAGGTGACTaGAGGATGGGCAACGTAGTA +
Preference number: 4 (lower is better)
Translates to: CSIYQELSIIFLTQLTPSLAVGD*RMGNVV
Trigger: TACTACGTTGCCCATCCTCCAGTCACCTACAGCCAG...AGATGGGGTGAGTTGGGTAAGGAAGATGATGCTTAGTTCCTGATAGATGCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp CAAGTGCTTATGTTGGTGGCTTCATCACATTTCAAAGCTTTGGTTAAACACATCTGCGTTCATGCCCCATaGGACACACGGTGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: QVLMLVASSHFKALVKHICVHAP*DTRCSR
Trigger: ACGAGAGCACCGTGTGTCTCATGGGGCATGAACGCA...GATGTGTTTAACCAAAGCTTTGAAATGTGATGAAGCCACCAACATAAGCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp TGTAGCATCTATCAGGAACTAAGCATCATCTTCCTTACCCAACTCACCCCATCTCTTTCATGTAACTGCTaGGAATCCCAAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: CSIYQELSIIFLTQLTPSLSCNC*ESQVRA
Trigger: GGCCCTCACTTGGGATTCTCAGCAGTTACATGAAAG...AGATGGGGTGAGTTGGGTAAGGAAGATGATGCTTAGTTCCTGATAGATGCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp TTAGAACCCAAGCTGGCTGGCAATATTGAGTGTCTCTGCCCTGAAGTGATGCTTCCGAAATTCCTGAATTaGGTTGCTGTCAAACACACC +
Preference number: 4 (lower is better)
Translates to: LEPKLAGNIECLCPEVMLPKFLN*VAVKHT
Trigger: GGTGTGTTTGACAGCAACTCAATTCAGGAATTTCGG...AAGCATCACTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCTTGGGTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp ATGCCGAAAGCATCAGAAAAAGAGTCAAATCAGAGTCCCGAAACAAATAAGAGAGTCTGCCTGCGTTCATaGCCCATGAGACACACGGTG +
Preference number: 4 (lower is better)
Translates to: MPKASEKESNQSPETNKRVCLRS*PMRHTV
Trigger: CACCGTGTGTCTCATGGGGCATGAACGCAGGCAGAC...TCTCTTATTTGTTTCGGGACTCTGATTTGACTCTTTTTCTGATGCTTTCGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp AGAATCAGAGCTGAGTTCCCCTTTAAAAGCCAAATGCCTACATCTAGAAGGAGGCCTTGGAAGCTCCAATaGACACAAGGCCAGACTTCA +
Preference number: 4 (lower is better)
Translates to: RIRAEFPFKSQMPTSRRRPWKLQ*TQGQTS
Trigger: TGAAGTCTGGCCTTGTGTGCATTGGAGCTTCCAAGG...CCTCCTTCTAGATGTAGGCATTTGGCTTTTAAAGGGGAACTCAGCTCTGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp CTTCATTGCCCCACTCTTAACACTGAAGCACACTGGGTCCCCTCAATTAGAACCGCTGTCAAACACACCTaGAGAAGGAAGTCACTATTT +
Preference number: 4 (lower is better)
Translates to: LHCPTLNTEAHWVPSIRTAVKHT*RRKSLF
Trigger: AAATAGTGACTTCCTTCTCCAGGTGTGTTTGACAGC...GGTTCTAATTGAGGGGACCCAGTGTGCTTCAGTGTTAAGAGTGGGGCAATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp AGATTTAAAGGGGAGACTAGAGCTCAAGGTCAGGCATCTAGTGCGTGCTATTCTAACACTGAAGCACACTaGGTCCCCTCAATTAGAACC +
Preference number: 4 (lower is better)
Translates to: RFKGETRAQGQASSACYSNTEAH*VPSIRT
Trigger: GGTTCTAATTGAGGGGACCCAGTGTGCTTCAGTGTT...AGAATAGCACGCACTAGATGCCTGACCTTGAGCTCTAGTCTCCCCTTTAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp GGATGTGAATCTAACCTTGGAAACTGGATTCTTACAAAGTCCACCCAGAAGGTTGGAAAGAGTCCACACTaGACTCAAACTGACGCCGAA +
Preference number: 4 (lower is better)
Translates to: GCESNLGNWILTKSTQKVGKSPH*TQTDAE
Trigger: TTCGGCGTCAGTTTGAGTTCAGTGTGGACTCTTTCC...AACCTTCTGGGTGGACTTTGTAAGAATCCAGTTTCCAAGGTTAGATTCACATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp CCCAAGCTGGCTGGCAATATTGAGTGTCTCTGCCCTGAAGTGATGCTTTCTAAGTTCTACCGAAATTCCTaGATTGAGTTGCTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: PKLAGNIECLCPEVMLSKFYRNS*IELLSN
Trigger: GTTTGACAGCAACTCAATTCAGGAATTTCGGTAGAA...CTTAGAAAGCATCACTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp ACTCCAGAAGAACAGCTGTGTCATACTTGGAATGTGACCAAAGTGGGTTTCCAGAGTTTCAGTCATGGCTaGTCTGCTTTTAAGAGGACC +
Preference number: 4 (lower is better)
Translates to: TPEEQLCHTWNVTKVGFQSFSHG*SAFKRT
Trigger: GGTCCTCTTAAAAGCAGATCAGCCATGACTGAAACT...CTGGAAACCCACTTTGGTCACATTCCAAGTATGACACAGCTGTTCTTCTGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp GGAAAGATGTGGATAGGTCATGCTTCCTGTAGCGTTTTCCAACGTGGCACTGTATTAGGAAGTTGCTTTTaGGTGGCACCATTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GKMWIGHASCSVFQRGTVLGSCF*VAPFPK
Trigger: TTTGGGAAATGGTGCCACTCAAAAGCAACTTCCTAA...TACAGTGCCACGTTGGAAAACGCTACAGGAAGCATGACCTATCCACATCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp CAGAAAAAGAGTCAAATCAGAGTCCCGAAACAAATAAGAGACTGCTTAACTTTACAAAACGTGGCCAGCTaGGGAGCCATTCAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: QKKSQIRVPKQIRDCLTLQNVAS*GAIQPD
Trigger: GTCCGGCTGAATGGCTCCGCAGCTGGCCACGTTTTG...TAAAGTTAAGCAGTCTCTTATTTGTTTCGGGACTCTGATTTGACTCTTTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp AATTTGCACCAACTCTCACTAGCCCAGGCAAAACTCCAAGCATTTTATTTAGCTATGAGGTTCAGAGTCTaGCTGCGTTCATGCCCCATG +
Preference number: 4 (lower is better)
Translates to: NLHQLSLAQAKLQAFYLAMRFRV*LRSCPM
Trigger: CATGGGGCATGAACGCAGGCAGACTCTGAACCTCAT...AGCTAAATAAAATGCTTGGAGTTTTGCCTGGGCTAGTGAGAGTTGGTGCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp GGAAAGATGTGGATAGGTCATGCTTCCTGTAGCGTTTTCCAACGTGGCACTGTAGGAATGATTTCAAAGTaGCTTGGAAGCTCCAATGCA +
Preference number: 4 (lower is better)
Translates to: GKMWIGHASCSVFQRGTVGMISK*LGSSNA
Trigger: TGCATTGGAGCTTCCAAGGCACTTTGAAATCATTCC...TACAGTGCCACGTTGGAAAACGCTACAGGAAGCATGACCTATCCACATCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp TGTAGCATCTATCAGGAACTAAGCATCATCTTCCTTACCCAACTCACCCCATCTGTTGGAAGAGCCACATaGAAGATTAGGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: CSIYQELSIIFLTQLTPSVGRAT*KIRSRS
Trigger: AGACCTGGACCTAATCTTCCATGTGGCTCTTCCAAC...AGATGGGGTGAGTTGGGTAAGGAAGATGATGCTTAGTTCCTGATAGATGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp CAAGTGCTTATGTTGGTGGCTTCATCACATTTCAAAGCTTTGGTTAAACACATCTCTCCCCAATCACGGTaGGGTGGAAGTGCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: QVLMLVASSHFKALVKHISPQSR*GGSAQR
Trigger: TCTCTGAGCACTTCCACCCCACCGTGATTGGGGAGA...GATGTGTTTAACCAAAGCTTTGAAATGTGATGAAGCCACCAACATAAGCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp GTCATGAATGACCAGATAGTTTCCAAAGTTGGGATCACTCTTCATTGGGGTTCACTTCTGGGTTCTTGGTaGCGATCAGTCTGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VMNDQIVSKVGITLHWGSLLGSW*RSVCSA
Trigger: TGCAGAACAGACTGATCGCCACCAAGAACCCAGAAG...TGAACCCCAATGAAGAGTGATCCCAACTTTGGAAACTATCTGGTCATTCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp GGATGTGAATCTAACCTTGGAAACTGGATTCTTACAAAGTCCACCCAGAAGGTTGCAAAGACTGGGGACTaGGTCTTTCTCGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: GCESNLGNWILTKSTQKVAKTGD*VFLATS
Trigger: AGAAGTTGCGAGAAAGACCCAGTCCCCAGTCTTTGC...AACCTTCTGGGTGGACTTTGTAAGAATCCAGTTTCCAAGGTTAGATTCACATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp TTAGAACCCAAGCTGGCTGGCAATATTGAGTGTCTCTGCCCTGAAGTGATGCTTGAAGTTGCTTTTGAGTaGCACCATTTCCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: LEPKLAGNIECLCPEVMLEVAFE*HHFPKS
Trigger: TGACTTTGGGAAATGGTGCCACTCAAAAGCAACTTC...AAGCATCACTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCTTGGGTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CAA 72 bp TTCCACAGGTCACTCAGTTCTACCGAAATTCCTGAATaGAGTTGCTGTCAAACACACCTGGAGAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: FHRSLSSTEIPE*SCCQTHLEKEV
Trigger: GACTTCCTTCTCCAGGTGTGTTTGACAGCAACTCAATTCAGGAATTTCGGTAGAACTGAGTGACCTGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CAA 72 bp GTCATCTCACCTTCCTATGCAAACACACACAAGAATTaGCACCAACTCTCACTAGCCCAGGCAAAACTCCAA +
Preference number: 4 (lower is better)
Translates to: VISPSYANTHKN*HQLSLAQAKLQ
Trigger: TTGGAGTTTTGCCTGGGCTAGTGAGAGTTGGTGCAAATTCTTGTGTGTGTTTGCATAGGAAGGTGAGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp AATTTGCACCAACTCTCACTAGCCCAGGCAAAACTCCAAGCATTTTATTTAGCTACACTGAACTCAAACTaGCGCCGAATGGAGTCGACA +
Preference number: 4 (lower is better)
Translates to: NLHQLSLAQAKLQAFYLATLNSN*RRMEST
Trigger: TGTCGACTCCATTCGGCGTCAGTTTGAGTTCAGTGT...AGCTAAATAAAATGCTTGGAGTTTTGCCTGGGCTAGTGAGAGTTGGTGCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp CACAAGAATTTGCACCAACTCTCACTAGCCCAGGCAAAACTCCAAGCATTTTATCATTCTCCACTCCGCTaGCAGGGAATAAACATAAGC +
Preference number: 4 (lower is better)
Translates to: HKNLHQLSLAQAKLQAFYHSPLR*QGINIS
Trigger: GCTTATGTTTATTCCCTGTCAGCGGAGTGGAGAATG...ATAAAATGCTTGGAGTTTTGCCTGGGCTAGTGAGAGTTGGTGCAAATTCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp TTAGAACCCAAGCTGGCTGGCAATATTGAGTGTCTCTGCCCTGAAGTGATGCTTCAAAAAGATCTGAGCTaGCTAAAAAGGTCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LEPKLAGNIECLCPEVMLQKDLS*LKRSGE
Trigger: TTCACCTGACCTTTTTAGTCAGCTCAGATCTTTTTG...AAGCATCACTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCTTGGGTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp TTTAGCTACTTCCTCTTTAGTAGATGGTCATCTCACCTTCCTATGCAAACACACTACCTGGTGCTTGTGTaGGCATTAGGAAAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: FSYFLFSRWSSHLPMQTHYLVLV*ALGKAG
Trigger: ACCTGCCTTTCCTAATGCTCACACAAGCACCAGGTA...GTGTGTTTGCATAGGAAGGTGAGATGACCATCTACTAAAGAGGAAGTAGCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp TGTAGCATCTATCAGGAACTAAGCATCATCTTCCTTACCCAACTCACCCCATCTGCTATTCTGCCAATGTaGGAGGAAAAGGTACTGTCT +
Preference number: 4 (lower is better)
Translates to: CSIYQELSIIFLTQLTPSAILPM*EEKVLS
Trigger: AGACAGTACCTTTTCCTCTCACATTGGCAGAATAGC...AGATGGGGTGAGTTGGGTAAGGAAGATGATGCTTAGTTCCTGATAGATGCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp AGAATCAGAGCTGAGTTCCCCTTTAAAAGCCAAATGCCTACATCTAGAAGGAGGTTCCAAAGCGAGCTGTaGAATTCTAGTCTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: RIRAEFPFKSQMPTSRRRFQSEL*NSSLCK
Trigger: CTTGCAGAGACTAGAATTTCACAGCTCGCTTTGGAA...CCTCCTTCTAGATGTAGGCATTTGGCTTTTAAAGGGGAACTCAGCTCTGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp TTTAGCTACTTCCTCTTTAGTAGATGGTCATCTCACCTTCCTATGCAAACACACAGCGGTCAGTGTCCGTaGAAACCTTCACTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FSYFLFSRWSSHLPMQTHSGQCP*KPSLAS
Trigger: AGAAGCTAGTGAAGGTTTGCACGGACACTGACCGCT...GTGTGTTTGCATAGGAAGGTGAGATGACCATCTACTAAAGAGGAAGTAGCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp ATGCCGAAAGCATCAGAAAAAGAGTCAAATCAGAGTCCCGAAACAAATAAGAGACCCAATCTCGATTACTaGACAGAGCTCAACCCCCAC +
Preference number: 4 (lower is better)
Translates to: MPKASEKESNQSPETNKRPNLDY*TELNPH
Trigger: GTGGGGGTTGAGCTCTGTGCAGTAATCGAGATTGGG...TCTCTTATTTGTTTCGGGACTCTGATTTGACTCTTTTTCTGATGCTTTCGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp TTAGAACCCAAGCTGGCTGGCAATATTGAGTGTCTCTGCCCTGAAGTGATGCTTAATATTGAGTGTCTCTaGCCTGAAGTGATGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LEPKLAGNIECLCPEVMLNIECL*PEVMLS
Trigger: AGAAAGCATCACTTCAGGGCAGAGACACTCAATATT...AAGCATCACTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCTTGGGTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp GGATGTGAATCTAACCTTGGAAACTGGATTCTTACAAAGTCCACCCAGAAGGTTGCATGTGAACTTCAGTaGTCTCTGCTACTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: GCESNLGNWILTKSTQKVACELQ*SLLLPS
Trigger: ACTTGGCAGTAGCAGAGAGCACTGAAGTTCACATGC...AACCTTCTGGGTGGACTTTGTAAGAATCCAGTTTCCAAGGTTAGATTCACATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp AGAATCAGAGCTGAGTTCCCCTTTAAAAGCCAAATGCCTACATCTAGAAGGAGGAACAGGCTGCAGACATaGCGAAAGCATCAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: RIRAEFPFKSQMPTSRRRNRLQT*RKHQKK
Trigger: CTTTTTCTGATGCTTTCGGCATGTCTGCAGCCTGTT...CCTCCTTCTAGATGTAGGCATTTGGCTTTTAAAGGGGAACTCAGCTCTGATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp CACAAGAATTTGCACCAACTCTCACTAGCCCAGGCAAAACTCCAAGCATTTTATCAGGCATCTAGTGCGTaGTATTCTGCCAATGTGAGA +
Preference number: 4 (lower is better)
Translates to: HKNLHQLSLAQAKLQAFYQASSA*YSANVR
Trigger: TCTCACATTGGCAGAATAGCACGCACTAGATGCCTG...ATAAAATGCTTGGAGTTTTGCCTGGGCTAGTGAGAGTTGGTGCAAATTCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp AGATTTAAAGGGGAGACTAGAGCTCAAGGTCAGGCATCTAGTGCGTGCTATTCTAAATTCTGCCTCTGTTaGAAGAGCCACATGGAAGAT +
Preference number: 4 (lower is better)
Translates to: RFKGETRAQGQASSACYSKFCLC*KSHMED
Trigger: ATCTTCCATGTGGCTCTTCCAACAGAGGCAGAATTT...AGAATAGCACGCACTAGATGCCTGACCTTGAGCTCTAGTCTCCCCTTTAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp GTCATGAATGACCAGATAGTTTCCAAAGTTGGGATCACTCTTCATTGGGGTTCACAAACTGACGCCGAATaGAGTCGACAAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: VMNDQIVSKVGITLHWGSQTDAE*SRQTSA
Trigger: AGCTGAAGTTTGTCGACTCCATTCGGCGTCAGTTTG...TGAACCCCAATGAAGAGTGATCCCAACTTTGGAAACTATCTGGTCATTCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp GTCATGAATGACCAGATAGTTTCCAAAGTTGGGATCACTCTTCATTGGGGTTCAGTTTTGATTTCTTCCTaGTCTGTGGGCCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VMNDQIVSKVGITLHWGSVLISS*SVGLKS
Trigger: GGACTTCAGGCCCACAGACCAGGAAGAAATCAAAAC...TGAACCCCAATGAAGAGTGATCCCAACTTTGGAAACTATCTGGTCATTCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp AGATTTAAAGGGGAGACTAGAGCTCAAGGTCAGGCATCTAGTGCGTGCTATTCTGGCAAGTGCTTATGTTaGTGGCTTCATCACATTTCA +
Preference number: 4 (lower is better)
Translates to: RFKGETRAQGQASSACYSGKCLC*WLHHIS
Trigger: TGAAATGTGATGAAGCCACCAACATAAGCACTTGCC...AGAATAGCACGCACTAGATGCCTGACCTTGAGCTCTAGTCTCCCCTTTAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CAA 72 bp AATGGCCTCTATGAGCGTCAGGGTCTCGTCTCACCATaGGATAACTACTTTGCTCTCAAAAAGAGGACATTT +
Preference number: 4 (lower is better)
Translates to: NGLYERQGLVSP*DNYFALKKRTF
Trigger: AAATGTCCTCTTTTTGAGAGCAAAGTAGTTATCCAATGGTGAGACGAGACCCTGACGCTCATAGAGGCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp GTCATGAATGACCAGATAGTTTCCAAAGTTGGGATCACTCTTCATTGGGGTTCAGCAAAGAATCCAGGATaGTTTGGAAAGAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: VMNDQIVSKVGITLHWGSAKNPG*FGKSPH
Trigger: GTGTGGACTCTTTCCAAATCATCCTGGATTCTTTGC...TGAACCCCAATGAAGAGTGATCCCAACTTTGGAAACTATCTGGTCATTCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp TTTAGCTACTTCCTCTTTAGTAGATGGTCATCTCACCTTCCTATGCAAACACACTTGAGGGTTGGCTCATaGTACACTGTAGACCCATTC +
Preference number: 4 (lower is better)
Translates to: FSYFLFSRWSSHLPMQTHLRVGS*YTVDPF
Trigger: GAATGGGTCTACAGTGTATCATGAGCCAACCCTCAA...GTGTGTTTGCATAGGAAGGTGAGATGACCATCTACTAAAGAGGAAGTAGCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp GGATGTGAATCTAACCTTGGAAACTGGATTCTTACAAAGTCCACCCAGAAGGTTGTCATACTTGGAATGTaGCCAAAGTGGGTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: GCESNLGNWILTKSTQKVVILGM*PKWVSS
Trigger: ACTGGAAACCCACTTTGGTCACATTCCAAGTATGAC...AACCTTCTGGGTGGACTTTGTAAGAATCCAGTTTCCAAGGTTAGATTCACATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp CAAGTGCTTATGTTGGTGGCTTCATCACATTTCAAAGCTTTGGTTAAACACATCACGGTGGGGTGGAAGTaGTCAGAGATGGGATTATTG +
Preference number: 4 (lower is better)
Translates to: QVLMLVASSHFKALVKHITVGWK*SEMGLL
Trigger: CAATAATCCCATCTCTGAGCACTTCCACCCCACCGT...GATGTGTTTAACCAAAGCTTTGAAATGTGATGAAGCCACCAACATAAGCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp ACTCCAGAAGAACAGCTGTGTCATACTTGGAATGTGACCAAAGTGGGTTTCCAGCATCGGTCATTTTTGTaGAAACACATGCCATTTGAC +
Preference number: 4 (lower is better)
Translates to: TPEEQLCHTWNVTKVGFQHRSFL*KHMPFD
Trigger: GTCAAATGGCATGTGTTTGCACAAAAATGACCGATG...CTGGAAACCCACTTTGGTCACATTCCAAGTATGACACAGCTGTTCTTCTGGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp TGTAGCATCTATCAGGAACTAAGCATCATCTTCCTTACCCAACTCACCCCATCTTTCTCGCAACTTCTGTaGCTCCTTTCATTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: CSIYQELSIIFLTQLTPSFSQLL*LLSFSE
Trigger: TTCTGAGAATGAAAGGAGGCACAGAAGTTGCGAGAA...AGATGGGGTGAGTTGGGTAAGGAAGATGATGCTTAGTTCCTGATAGATGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp GTCATGAATGACCAGATAGTTTCCAAAGTTGGGATCACTCTTCATTGGGGTTCAAGTTCATACACAGCTTaGTGTGACTCAAACCCCAGT +
Preference number: 4 (lower is better)
Translates to: VMNDQIVSKVGITLHWGSSSYTA*CDSNPS
Trigger: ACTGGGGTTTGAGTCACAGCAAGCTGTGTATGAACT...TGAACCCCAATGAAGAGTGATCCCAACTTTGGAAACTATCTGGTCATTCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp TGTAGCATCTATCAGGAACTAAGCATCATCTTCCTTACCCAACTCACCCCATCTCTCCTTCAGAGTGACTaGACTGATTTTGAGCTTGTT +
Preference number: 4 (lower is better)
Translates to: CSIYQELSIIFLTQLTPSLLQSD*TDFELV
Trigger: AACAAGCTCAAAATCAGTCCAGTCACTCTGAAGGAG...AGATGGGGTGAGTTGGGTAAGGAAGATGATGCTTAGTTCCTGATAGATGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp CAGAAAAAGAGTCAAATCAGAGTCCCGAAACAAATAAGAGACTGCTTAACTTTAGGTGCCTCATTACCCTaGGCCCCAAGCCTTCTAAGT +
Preference number: 4 (lower is better)
Translates to: QKKSQIRVPKQIRDCLTLGASLP*APSLLS
Trigger: ACTTAGAAGGCTTGGGGCCCAGGGTAATGAGGCACC...TAAAGTTAAGCAGTCTCTTATTTGTTTCGGGACTCTGATTTGACTCTTTTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp CAGAAAAAGAGTCAAATCAGAGTCCCGAAACAAATAAGAGACTGCTTAACTTTAACCATGGTGCAATGGTaGCAAAGACTGGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: QKKSQIRVPKQIRDCLTLTMVQW*QRLGTG
Trigger: CCCAGTCCCCAGTCTTTGCCACCATTGCACCATGGT...TAAAGTTAAGCAGTCTCTTATTTGTTTCGGGACTCTGATTTGACTCTTTTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp GGAAAGATGTGGATAGGTCATGCTTCCTGTAGCGTTTTCCAACGTGGCACTGTATTAAAAGTACAGCTTTaGTCAGTGCAGCTTTTAACC +
Preference number: 4 (lower is better)
Translates to: GKMWIGHASCSVFQRGTVLKVQL*SVQLLT
Trigger: GGTTAAAAGCTGCACTGACCAAAGCTGTACTTTTAA...TACAGTGCCACGTTGGAAAACGCTACAGGAAGCATGACCTATCCACATCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp TTAGAACCCAAGCTGGCTGGCAATATTGAGTGTCTCTGCCCTGAAGTGATGCTTTCTACTAAGCTCTTTTaGATTAGGATAACTTCACTG +
Preference number: 4 (lower is better)
Translates to: LEPKLAGNIECLCPEVMLSTKLF*IRITSL
Trigger: CAGTGAAGTTATCCTAATGCAAAAGAGCTTAGTAGA...AAGCATCACTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCTTGGGTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp CAAGTGCTTATGTTGGTGGCTTCATCACATTTCAAAGCTTTGGTTAAACACATCAGTTATCTCCAAGGTTaGAAAGTTGCCTCGTCCGTG +
Preference number: 4 (lower is better)
Translates to: QVLMLVASSHFKALVKHISYLQG*KVASSV
Trigger: CACGGACGAGGCAACTTTCCAACCTTGGAGATAACT...GATGTGTTTAACCAAAGCTTTGAAATGTGATGAAGCCACCAACATAAGCACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp CAGAAAAAGAGTCAAATCAGAGTCCCGAAACAAATAAGAGACTGCTTAACTTTATCTTTGACCAAAACGTaGCCAGCTGCGGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: QKKSQIRVPKQIRDCLTLSLTKT*PAAEPF
Trigger: GAATGGCTCCGCAGCTGGCCACGTTTTGGTCAAAGA...TAAAGTTAAGCAGTCTCTTATTTGTTTCGGGACTCTGATTTGACTCTTTTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp CACAAGAATTTGCACCAACTCTCACTAGCCCAGGCAAAACTCCAAGCATTTTATGAATCCAGGATGATTTaGAAAGAGTCCACACTGAAC +
Preference number: 4 (lower is better)
Translates to: HKNLHQLSLAQAKLQAFYESRMI*KESTLN
Trigger: GTTCAGTGTGGACTCTTTCCAAATCATCCTGGATTC...ATAAAATGCTTGGAGTTTTGCCTGGGCTAGTGAGAGTTGGTGCAAATTCTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp CAAGTGCTTATGTTGGTGGCTTCATCACATTTCAAAGCTTTGGTTAAACACATCGGGTCCTTTGAGGGTTaGCTCATGATACACTGTAGA +
Preference number: 4 (lower is better)
Translates to: QVLMLVASSHFKALVKHIGSFEG*LMIHCR
Trigger: TCTACAGTGTATCATGAGCCAACCCTCAAAGGACCC...GATGTGTTTAACCAAAGCTTTGAAATGTGATGAAGCCACCAACATAAGCACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp TGTAGCATCTATCAGGAACTAAGCATCATCTTCCTTACCCAACTCACCCCATCTTTTCCAGTTAAAACATaGGAAGACCCTCATGTCAGT +
Preference number: 4 (lower is better)
Translates to: CSIYQELSIIFLTQLTPSFPVKT*EDPHVS
Trigger: ACTGACATGAGGGTCTTCCCATGTTTTAACTGGAAA...AGATGGGGTGAGTTGGGTAAGGAAGATGATGCTTAGTTCCTGATAGATGCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp AATTTGCACCAACTCTCACTAGCCCAGGCAAAACTCCAAGCATTTTATTTAGCTCAGCTGTGTCATACTTaGAATGTGACCAAAGTGGGT +
Preference number: 4 (lower is better)
Translates to: NLHQLSLAQAKLQAFYLAQLCHT*NVTKVG
Trigger: ACCCACTTTGGTCACATTCCAAGTATGACACAGCTG...AGCTAAATAAAATGCTTGGAGTTTTGCCTGGGCTAGTGAGAGTTGGTGCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp AGATTTAAAGGGGAGACTAGAGCTCAAGGTCAGGCATCTAGTGCGTGCTATTCTAAGTGCTTATGTTGGTaGCTTCATCACATTTCAAAG +
Preference number: 4 (lower is better)
Translates to: RFKGETRAQGQASSACYSKCLCW*LHHISK
Trigger: CTTTGAAATGTGATGAAGCCACCAACATAAGCACTT...AGAATAGCACGCACTAGATGCCTGACCTTGAGCTCTAGTCTCCCCTTTAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp GGATGTGAATCTAACCTTGGAAACTGGATTCTTACAAAGTCCACCCAGAAGGTTGTCTCGTCTCACCATTaGATAACTACTTTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: GCESNLGNWILTKSTQKVVSSHH*ITTLLS
Trigger: TGAGAGCAAAGTAGTTATCCAATGGTGAGACGAGAC...AACCTTCTGGGTGGACTTTGTAAGAATCCAGTTTCCAAGGTTAGATTCACATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp TTAGAACCCAAGCTGGCTGGCAATATTGAGTGTCTCTGCCCTGAAGTGATGCTTTTTAACTGGTTGAATTaGAATATGTTCCAAAGCGAG +
Preference number: 4 (lower is better)
Translates to: LEPKLAGNIECLCPEVMLFNWLN*NMFQSE
Trigger: CTCGCTTTGGAACATATTCCAATTCAACCAGTTAAA...AAGCATCACTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCTTGGGTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CAA 72 bp TCTAGTCTCTGCAAGATTAAGGATGTGAATCTAACCTaGGAAACTGGATTCTTACAAAGTCCACCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SSLCKIKDVNLT*ETGFLQSPPRR
Trigger: CCTTCTGGGTGGACTTTGTAAGAATCCAGTTTCCAAGGTTAGATTCACATCCTTAATCTTGCAGAGACTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp CAAGTGCTTATGTTGGTGGCTTCATCACATTTCAAAGCTTTGGTTAAACACATCTGTCAGTTACCACAATaGCTCTGGACTCAGCACAAT +
Preference number: 4 (lower is better)
Translates to: QVLMLVASSHFKALVKHICQLPQ*LWTQHN
Trigger: ATTGTGCTGAGTCCAGAGTCATTGTGGTAACTGACA...GATGTGTTTAACCAAAGCTTTGAAATGTGATGAAGCCACCAACATAAGCACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp ATGCCGAAAGCATCAGAAAAAGAGTCAAATCAGAGTCCCGAAACAAATAAGAGAATACCAGCTAAGCCTTaGGTTTCAGTCATGGCTGAT +
Preference number: 4 (lower is better)
Translates to: MPKASEKESNQSPETNKRIPAKP*VSVMAD
Trigger: ATCAGCCATGACTGAAACTCAAGGCTTAGCTGGTAT...TCTCTTATTTGTTTCGGGACTCTGATTTGACTCTTTTTCTGATGCTTTCGGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp CAAGTGCTTATGTTGGTGGCTTCATCACATTTCAAAGCTTTGGTTAAACACATCCCCCATCAGGAACTCTaGTTGGAAGGCATTAGTAAT +
Preference number: 4 (lower is better)
Translates to: QVLMLVASSHFKALVKHIPHQEL*LEGISN
Trigger: ATTACTAATGCCTTCCAATCAGAGTTCCTGATGGGG...GATGTGTTTAACCAAAGCTTTGAAATGTGATGAAGCCACCAACATAAGCACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp TCCCTTGAACAAAAATTAAGTCACAAGAGCACCCTCATGTTTACCATTTTCTGCTTTCTTCTGGGTTCTTaGTGGCGATCAGTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SLEQKLSHKSTLMFTIFCFLLGS*WRSVCS
Trigger: AGAACAGACTGATCGCCACCAAGAACCCAGAAGAAA...GCAGAAAATGGTAAACATGAGGGTGCTCTTGTGACTTAATTTTTGTTCAAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp AATTTGCACCAACTCTCACTAGCCCAGGCAAAACTCCAAGCATTTTATTTAGCTGATAGTTTCCAAAGTTaGGATCACTCTTCATTGGGG +
Preference number: 4 (lower is better)
Translates to: NLHQLSLAQAKLQAFYLADSFQS*DHSSLG
Trigger: CCCCAATGAAGAGTGATCCCAACTTTGGAAACTATC...AGCTAAATAAAATGCTTGGAGTTTTGCCTGGGCTAGTGAGAGTTGGTGCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp ACTCCAGAAGAACAGCTGTGTCATACTTGGAATGTGACCAAAGTGGGTTTCCAGCACATTTCAAAGCTTTaGTTAAACACATCGGTCATT +
Preference number: 4 (lower is better)
Translates to: TPEEQLCHTWNVTKVGFQHISKL*LNTSVI
Trigger: AATGACCGATGTGTTTAACCAAAGCTTTGAAATGTG...CTGGAAACCCACTTTGGTCACATTCCAAGTATGACACAGCTGTTCTTCTGGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp TGTAGCATCTATCAGGAACTAAGCATCATCTTCCTTACCCAACTCACCCCATCTTCTTCCCAAATATACTaGAATGATTTCAAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: CSIYQELSIIFLTQLTPSSSQIY*NDFKVP
Trigger: AGGCACTTTGAAATCATTCCAGTATATTTGGGAAGA...AGATGGGGTGAGTTGGGTAAGGAAGATGATGCTTAGTTCCTGATAGATGCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CAA 72 bp TACAAAGGAGTTATTCCTCAAGTTAGGAAGTTGCTTTaGAGTGGCACCATTTCCCAAAGTCAACAAAGCAGT +
Preference number: 4 (lower is better)
Translates to: YKGVIPQVRKLL*SGTISQSQQSS
Trigger: ACTGCTTTGTTGACTTTGGGAAATGGTGCCACTCAAAAGCAACTTCCTAACTTGAGGAATAACTCCTTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp TTTAGCTACTTCCTCTTTAGTAGATGGTCATCTCACCTTCCTATGCAAACACACCTAATGTTTGGGACATaGCATGTTAGTGTCTATCTT +
Preference number: 4 (lower is better)
Translates to: FSYFLFSRWSSHLPMQTHLMFGT*HVSVYL
Trigger: AAGATAGACACTAACATGTCATGTCCCAAACATTAG...GTGTGTTTGCATAGGAAGGTGAGATGACCATCTACTAAAGAGGAAGTAGCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp CAAGTGCTTATGTTGGTGGCTTCATCACATTTCAAAGCTTTGGTTAAACACATCTTCCTCTTTAGTAGATaGTCATCTCACCTTCCTATG +
Preference number: 4 (lower is better)
Translates to: QVLMLVASSHFKALVKHIFLFSR*SSHLPM
Trigger: CATAGGAAGGTGAGATGACCATCTACTAAAGAGGAA...GATGTGTTTAACCAAAGCTTTGAAATGTGATGAAGCCACCAACATAAGCACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
3UTR CAA 72 bp GTGCTTATGTTGGTGGCTTCATCACATTTCAAAGCTTaGGTTAAACACATCGGTCATTTTTGTGCAAACACA +
Preference number: 4 (lower is better)
Translates to: VLMLVASSHFKA*VKHIGHFCANT
Trigger: TGTGTTTGCACAAAAATGACCGATGTGTTTAACCAAAGCTTTGAAATGTGATGAAGCCACCAACATAAGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR TCA 90 bp TCCCTTGAACAAAAATTAAGTCACAAGAGCACCCTCATGTTTACCATTTTCTGCTTACCATTTTCTGCCTaGCTAAAATTGGTACAAGAG +
Preference number: 4 (lower is better)
Translates to: SLEQKLSHKSTLMFTIFCLPFSA*LKLVQE
Trigger: CTCTTGTACCAATTTTAGTCAGGCAGAAAATGGTAA...GCAGAAAATGGTAAACATGAGGGTGCTCTTGTGACTTAATTTTTGTTCAAGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp CAGAAAAAGAGTCAAATCAGAGTCCCGAAACAAATAAGAGACTGCTTAACTTTAGATTTCAAAGTGCCTTaGAAGCTCCAATGCACACAA +
Preference number: 4 (lower is better)
Translates to: QKKSQIRVPKQIRDCLTLDFKVP*KLQCTQ
Trigger: TTGTGTGCATTGGAGCTTCCAAGGCACTTTGAAATC...TAAAGTTAAGCAGTCTCTTATTTGTTTCGGGACTCTGATTTGACTCTTTTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CCA 90 bp ATGCCGAAAGCATCAGAAAAAGAGTCAAATCAGAGTCCCGAAACAAATAAGAGAATCAGGAACTCTGATTaGAAGGCATTAGTAATAGAG +
Preference number: 4 (lower is better)
Translates to: MPKASEKESNQSPETNKRIRNSD*KALVIE
Trigger: CTCTATTACTAATGCCTTCCAATCAGAGTTCCTGAT...TCTCTTATTTGTTTCGGGACTCTGATTTGACTCTTTTTCTGATGCTTTCGGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR GCA 90 bp CAGAAAAAGAGTCAAATCAGAGTCCCGAAACAAATAAGAGACTGCTTAACTTTATTTCTGTTAGGCAAGTaGTTATGTTGGTGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: QKKSQIRVPKQIRDCLTLFLLGK*LCWWLH
Trigger: ATGAAGCCACCAACATAAGCACTTGCCTAACAGAAA...TAAAGTTAAGCAGTCTCTTATTTGTTTCGGGACTCTGATTTGACTCTTTTTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CCA 90 bp TGGGGAAACTGGGCAATAGAAGAGGAGGCGACAGAGGCAGGTCCTTaGCGTGGGCAGGCCCCAGCAGGAGCGGCGCGACCTCTACAGCCC +
Preference number: 5 (lower is better)
Translates to: WGNWAIEEEATEAGP*RGQAPAGAARPLQP
Trigger: GGGCTGTAGAGGTCGCGCCGCTCCTGCTGGGGCCTGCCCACGCCAAGGACCTGCCTCTGTCGCCTCCTCTTCTATTGCCCAGTTTCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS GCA 90 bp GCCAGCTGCGGAGCCATTCAGCCGGACGTCGTGCACTTTGATGCCTaGCTCCTCCAGCCGACTGCGGACGGTCTGGACGATGTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: ASCGAIQPDVVHFDA*LLQPTADGLDDVLQ
Trigger: CTGAAGGACATCGTCCAGACCGTCCGCAGTCGGCTGGAGGAGGCAGGCATCAAAGTGCACGACGTCCGGCTGAATGGCTCCGCAGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS TCA 90 bp AAACGTGGCCAGCTGCGGAGCCATTCAGCCGGACGTCGTGCACTTTaGTGCCTGCCTCCTCCAGCCGACTGCGGACGGTCTGGACGATGT +
Preference number: 5 (lower is better)
Translates to: KRGQLRSHSAGRRAL*CLPPPADCGRSGRC
Trigger: ACATCGTCCAGACCGTCCGCAGTCGGCTGGAGGAGGCAGGCATCAAAGTGCACGACGTCCGGCTGAATGGCTCCGCAGCTGGCCACGTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS GCA 90 bp TTGACCAAAACGTGGCCAGCTGCGGAGCCATTCAGCCGGACGTCGTaGACTTTGATGCCTGCCTCCTCCAGCCGACTGCGGACGGTCTGG +
Preference number: 5 (lower is better)
Translates to: LTKTWPAAEPFSRTS*TLMPASSSRLRTVW
Trigger: CCAGACCGTCCGCAGTCGGCTGGAGGAGGCAGGCATCAAAGTGCACGACGTCCGGCTGAATGGCTCCGCAGCTGGCCACGTTTTGGTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS GCA 90 bp GTCTTTGCAGCCCAAGCCATTGTCTTTGACCAAAACGTGGCCAGCTaGGGAGCCATTCAGCCGGACGTCGTGCACTTTGATGCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: VFAAQAIVFDQNVAS*GAIQPDVVHFDACL
Trigger: GAGGCAGGCATCAAAGTGCACGACGTCCGGCTGAATGGCTCCGCAGCTGGCCACGTTTTGGTCAAAGACAATGGCTTGGGCTGCAAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS GCA 90 bp GAGCACGCTGAAGGACATGCAATCCCTGGTACAGCTGCTCTCCTCTaGCATCTTCAGGGGATGTTCTGGCTGGGGAAACTGGGCAATAGA +
Preference number: 5 (lower is better)
Translates to: EHAEGHAIPGTAALL*HLQGMFWLGKLGNR
Trigger: TCTATTGCCCAGTTTCCCCAGCCAGAACATCCCCTGAAGATGGCAGAGGAGAGCAGCTGTACCAGGGATTGCATGTCCTTCAGCGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CCA 90 bp TCGTGCACTTTGATGCCTGCCTCCTCCAGCCGACTGCGGACGGTCTaGACGATGTCCTTCAGAGTTATCTCCAAGGTTGGAAAGTTGCCT +
Preference number: 5 (lower is better)
Translates to: SCTLMPASSSRLRTV*TMSFRVISKVGKLP
Trigger: AGGCAACTTTCCAACCTTGGAGATAACTCTGAAGGACATCGTCCAGACCGTCCGCAGTCGGCTGGAGGAGGCAGGCATCAAAGTGCACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp CAACCTGACTCCAAGCAGCAGGCTAGGAGAACAGGCTGCAGACATGCCGAAAGCGGACTGATTTTGAGCTaGTTCACACCCTCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: QPDSKQQARRTGCRHAESGLILS*FTPSGR
Trigger: CCTGCCAGAGGGTGTGAACAAGCTCAAAATCAGTCC...GCTTTCGGCATGTCTGCAGCCTGTTCTCCTAGCCTGCTGCTTGGAGTCAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS TCA 90 bp TGGATAGGTACAACTTCAGTGAGGACCTCATGCAGCCGGCTAACCTaGTCCCAGTTGAGCACGCTGAAGGACATGCAATCCCTGGTACAG +
Preference number: 5 (lower is better)
Translates to: WIGTTSVRTSCSRLT*SQLSTLKDMQSLVQ
Trigger: CTGTACCAGGGATTGCATGTCCTTCAGCGTGCTCAACTGGGATCAGGTTAGCCGGCTGCATGAGGTCCTCACTGAAGTTGTACCTATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CCA 90 bp TTAGTTACAGGGCAGCCAGGTAGGGTAAGGCTGGCTGTAGGTGACTaGAGGATGGGCAACGTAGTAGTTGCTGAAGTTGCCATCACTGAC +
Preference number: 5 (lower is better)
Translates to: LVTGQPGRVRLAVGD*RMGNVVVAEVAITD
Trigger: GTCAGTGATGGCAACTTCAGCAACTACTACGTTGCCCATCCTCCAGTCACCTACAGCCAGCCTTACCCTACCTGGCTGCCCTGTAACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp ACTCCAGAAGAACAGCTGTGTCATACTTGGAATGTGACCAAAGTGGGTTTCCAGCGGACGTCGTGCACTTaGATGCCTGCCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: TPEEQLCHTWNVTKVGFQRTSCT*MPASSS
Trigger: GCTGGAGGAGGCAGGCATCAAAGTGCACGACGTCCG...CTGGAAACCCACTTTGGTCACATTCCAAGTATGACACAGCTGTTCTTCTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp CCTGGTGCTTGTGTGAGCATTAGGAAAGGCAGGTTTCAGCTAGAGTTTCCAGGGAGAAGGTTGCTGTACTaGAGAAGTCCCCCGCCTCTG +
Preference number: 5 (lower is better)
Translates to: PGACVSIRKGRFQLEFPGRRLLY*RSPPPL
Trigger: CAGAGGCGGGGGACTTCTCAAGTACAGCAACCTTCT...CCCTGGAAACTCTAGCTGAAACCTGCCTTTCCTAATGCTCACACAAGCACCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS GCA 90 bp CCGCCTCTGATTTCTTCTGGGTTCTTGGTGGCGATCAGTCTGTTCTaGAGATGGTCAAAAGCTTCCTCAAAGTCCCCGTACATGCTCTCC +
Preference number: 5 (lower is better)
Translates to: PPLISSGFLVAISLF*RWSKASSKSPYMLS
Trigger: GGAGAGCATGTACGGGGACTTTGAGGAAGCTTTTGACCATCTGCAGAACAGACTGATCGCCACCAAGAACCCAGAAGAAATCAGAGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CCA 90 bp ACTGCGGACGGTCTGGACGATGTCCTTCAGAGTTATCTCCAAGGTTaGAAAGTTGCCTCGTCCGTGGATAGGTACAACTTCAGTGAGGAC +
Preference number: 5 (lower is better)
Translates to: TADGLDDVLQSYLQG*KVASSVDRYNFSED
Trigger: GTCCTCACTGAAGTTGTACCTATCCACGGACGAGGCAACTTTCCAACCTTGGAGATAACTCTGAAGGACATCGTCCAGACCGTCCGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CCA 90 bp ATGTCCTTCAGAGTTATCTCCAAGGTTGGAAAGTTGCCTCGTCCGTaGATAGGTACAACTTCAGTGAGGACCTCATGCAGCCGGCTAACC +
Preference number: 5 (lower is better)
Translates to: MSFRVISKVGKLPRP*IGTTSVRTSCSRLT
Trigger: GGTTAGCCGGCTGCATGAGGTCCTCACTGAAGTTGTACCTATCCACGGACGAGGCAACTTTCCAACCTTGGAGATAACTCTGAAGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp CCCAAGCTGGCTGGCAATATTGAGTGTCTCTGCCCTGAAGTGATGCTTTCTAAGTTGCAGCCCAAGCCATaGTCTTTGACCAAAACGTGG +
Preference number: 5 (lower is better)
Translates to: PKLAGNIECLCPEVMLSKLQPKP*SLTKTW
Trigger: CCACGTTTTGGTCAAAGACAATGGCTTGGGCTGCAA...CTTAGAAAGCATCACTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp GGAAAGATGTGGATAGGTCATGCTTCCTGTAGCGTTTTCCAACGTGGCACTGTATCCCGCACAAGAAGGTaGCTGTACTTGAGAAGTCCC +
Preference number: 5 (lower is better)
Translates to: GKMWIGHASCSVFQRGTVSRTRR*LYLRSP
Trigger: GGGACTTCTCAAGTACAGCAACCTTCTTGTGCGGGA...TACAGTGCCACGTTGGAAAACGCTACAGGAAGCATGACCTATCCACATCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp CTTCATTGCCCCACTCTTAACACTGAAGCACACTGGGTCCCCTCAATTAGAACCGTGACTGGACTGATTTaGAGCTTGTTCACACCCTCT +
Preference number: 5 (lower is better)
Translates to: LHCPTLNTEAHWVPSIRTVTGLI*SLFTPS
Trigger: AGAGGGTGTGAACAAGCTCAAAATCAGTCCAGTCAC...GGTTCTAATTGAGGGGACCCAGTGTGCTTCAGTGTTAAGAGTGGGGCAATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp ACTCCAGAAGAACAGCTGTGTCATACTTGGAATGTGACCAAAGTGGGTTTCCAGTTCTTCCCGTTCTTGTaGGAGAGGGAGATCAGGCTC +
Preference number: 5 (lower is better)
Translates to: TPEEQLCHTWNVTKVGFQFFPFL*EREIRL
Trigger: GAGCCTGATCTCCCTCTCCAACAAGAACGGGAAGAA...CTGGAAACCCACTTTGGTCACATTCCAAGTATGACACAGCTGTTCTTCTGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp CAACCTGACTCCAAGCAGCAGGCTAGGAGAACAGGCTGCAGACATGCCGAAAGCTCACATTTCAAAGCTTaGGTTAAACACATCGGTCAT +
Preference number: 5 (lower is better)
Translates to: QPDSKQQARRTGCRHAESSHFKA*VKHIGH
Trigger: ATGACCGATGTGTTTAACCAAAGCTTTGAAATGTGA...GCTTTCGGCATGTCTGCAGCCTGTTCTCCTAGCCTGCTGCTTGGAGTCAGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp CAACCTGACTCCAAGCAGCAGGCTAGGAGAACAGGCTGCAGACATGCCGAAAGCCATTGGATAACTACTTaGCTCTCAAAAAGAGGACAT +
Preference number: 5 (lower is better)
Translates to: QPDSKQQARRTGCRHAESHWITT*LSKRGH
Trigger: ATGTCCTCTTTTTGAGAGCAAAGTAGTTATCCAATG...GCTTTCGGCATGTCTGCAGCCTGTTCTCCTAGCCTGCTGCTTGGAGTCAGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp GGATGTGAATCTAACCTTGGAAACTGGATTCTTACAAAGTCCACCCAGAAGGTTAGAGCCCTAGCCCTATaGGGGTTCCCACTGTGGAAA +
Preference number: 5 (lower is better)
Translates to: GCESNLGNWILTKSTQKVRALAL*GFPLWK
Trigger: TTTCCACAGTGGGAACCCCAATAGGGCTAGGGCTCT...AACCTTCTGGGTGGACTTTGTAAGAATCCAGTTTCCAAGGTTAGATTCACATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp GGAAAGATGTGGATAGGTCATGCTTCCTGTAGCGTTTTCCAACGTGGCACTGTATGGGATCACTCTTCATaGGGGTTCACTCTTCATTGC +
Preference number: 5 (lower is better)
Translates to: GKMWIGHASCSVFQRGTVWDHSS*GFTLHC
Trigger: GCAATGAAGAGTGAACCCCAATGAAGAGTGATCCCA...TACAGTGCCACGTTGGAAAACGCTACAGGAAGCATGACCTATCCACATCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp TGTAGCATCTATCAGGAACTAAGCATCATCTTCCTTACCCAACTCACCCCATCTATTAGGTCCAGGTCTTaGCAGCCCAAGCCATTGTCT +
Preference number: 5 (lower is better)
Translates to: CSIYQELSIIFLTQLTPSIRSRS*QPKPLS
Trigger: AGACAATGGCTTGGGCTGCAAAGACCTGGACCTAAT...AGATGGGGTGAGTTGGGTAAGGAAGATGATGCTTAGTTCCTGATAGATGCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp CACAAGAATTTGCACCAACTCTCACTAGCCCAGGCAAAACTCCAAGCATTTTATACGTTCTTCCCGTTCTaGTTGGAGAGGGAGATCAGG +
Preference number: 5 (lower is better)
Translates to: HKNLHQLSLAQAKLQAFYTFFPF*LEREIR
Trigger: CCTGATCTCCCTCTCCAACAAGAACGGGAAGAACGT...ATAAAATGCTTGGAGTTTTGCCTGGGCTAGTGAGAGTTGGTGCAAATTCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp GGAAAGATGTGGATAGGTCATGCTTCCTGTAGCGTTTTCCAACGTGGCACTGTAAACACACACAAGAATTaGCACCAACTCTCACTAGCC +
Preference number: 5 (lower is better)
Translates to: GKMWIGHASCSVFQRGTVNTHKN*HQLSLA
Trigger: GGCTAGTGAGAGTTGGTGCAAATTCTTGTGTGTGTT...TACAGTGCCACGTTGGAAAACGCTACAGGAAGCATGACCTATCCACATCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp GGATGTGAATCTAACCTTGGAAACTGGATTCTTACAAAGTCCACCCAGAAGGTTGAGTTATCTCCAAGGTaGGAAAGTTGCCTCGTCCGT +
Preference number: 5 (lower is better)
Translates to: GCESNLGNWILTKSTQKVELSPR*ESCLVR
Trigger: ACGGACGAGGCAACTTTCCAACCTTGGAGATAACTC...AACCTTCTGGGTGGACTTTGTAAGAATCCAGTTTCCAAGGTTAGATTCACATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp TTTAGCTACTTCCTCTTTAGTAGATGGTCATCTCACCTTCCTATGCAAACACACCCCAAGCCATTGTCTTaGACCAAAACGTGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: FSYFLFSRWSSHLPMQTHPKPLS*TKTWPA
Trigger: AGCTGGCCACGTTTTGGTCAAAGACAATGGCTTGGG...GTGTGTTTGCATAGGAAGGTGAGATGACCATCTACTAAAGAGGAAGTAGCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp AGAATCAGAGCTGAGTTCCCCTTTAAAAGCCAAATGCCTACATCTAGAAGGAGGATTTCTTCTGGGTTCTaGGTGGCGATCAGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: RIRAEFPFKSQMPTSRRRISSGF*VAISLF
Trigger: GAACAGACTGATCGCCACCAAGAACCCAGAAGAAAT...CCTCCTTCTAGATGTAGGCATTTGGCTTTTAAAGGGGAACTCAGCTCTGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp GCAAAGACTGGGGACTGGGTCTTTCTCGCAACTTCTGTGCCTCCTTTCATTCTCATTGGCTTTGGTTTATaGATGAATGACATTCTCCAC +
Preference number: 5 (lower is better)
Translates to: AKTGDWVFLATSVPPFILIGFGL*MNDILH
Trigger: GTGGAGAATGTCATTCATCAATAAACCAAAGCCAAT...GAGAATGAAAGGAGGCACAGAAGTTGCGAGAAAGACCCAGTCCCCAGTCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp AATTTGCACCAACTCTCACTAGCCCAGGCAAAACTCCAAGCATTTTATTTAGCTAGCTGGCTGGCAATATaGAGTGTCTCTGCCCTGAAG +
Preference number: 5 (lower is better)
Translates to: NLHQLSLAQAKLQAFYLASWLAI*SVSALK
Trigger: CTTCAGGGCAGAGACACTCAATATTGCCAGCCAGCT...AGCTAAATAAAATGCTTGGAGTTTTGCCTGGGCTAGTGAGAGTTGGTGCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp AGATTTAAAGGGGAGACTAGAGCTCAAGGTCAGGCATCTAGTGCGTGCTATTCTGTTAGGAAGTTGCTTTaGAGTGGCACCATTTCCCAA +
Preference number: 5 (lower is better)
Translates to: RFKGETRAQGQASSACYSVRKLL*SGTISQ
Trigger: TTGGGAAATGGTGCCACTCAAAAGCAACTTCCTAAC...AGAATAGCACGCACTAGATGCCTGACCTTGAGCTCTAGTCTCCCCTTTAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp ACTCCAGAAGAACAGCTGTGTCATACTTGGAATGTGACCAAAGTGGGTTTCCAGAGAATCCAGGATGATTaGGAAAGAGTCCACACTGAA +
Preference number: 5 (lower is better)
Translates to: TPEEQLCHTWNVTKVGFQRIQDD*ERVHTE
Trigger: TTCAGTGTGGACTCTTTCCAAATCATCCTGGATTCT...CTGGAAACCCACTTTGGTCACATTCCAAGTATGACACAGCTGTTCTTCTGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp CAAGTGCTTATGTTGGTGGCTTCATCACATTTCAAAGCTTTGGTTAAACACATCACTGGGGATGATGTTTaGTTCCGCCAGCACACGCAA +
Preference number: 5 (lower is better)
Translates to: QVLMLVASSHFKALVKHITGDDV*FRQHTQ
Trigger: TTGCGTGTGCTGGCGGAACAAAACATCATCCCCAGT...GATGTGTTTAACCAAAGCTTTGAAATGTGATGAAGCCACCAACATAAGCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp TTTAGCTACTTCCTCTTTAGTAGATGGTCATCTCACCTTCCTATGCAAACACACCAATCACTCCGGGCTTaGGGTTTTCATAGCCAAAGG +
Preference number: 5 (lower is better)
Translates to: FSYFLFSRWSSHLPMQTHQSLRA*GFHSQR
Trigger: CCTTTGGCTATGAAAACCCAAAGCCCGGAGTGATTG...GTGTGTTTGCATAGGAAGGTGAGATGACCATCTACTAAAGAGGAAGTAGCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp TGTAGCATCTATCAGGAACTAAGCATCATCTTCCTTACCCAACTCACCCCATCTTTCAGCGAAGTGGTTTaGAAGGTAAGTCTCCAACTT +
Preference number: 5 (lower is better)
Translates to: CSIYQELSIIFLTQLTPSFSEVV*KVSLQL
Trigger: AAGTTGGAGACTTACCTTCAAAACCACTTCGCTGAA...AGATGGGGTGAGTTGGGTAAGGAAGATGATGCTTAGTTCCTGATAGATGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp AGAATCAGAGCTGAGTTCCCCTTTAAAAGCCAAATGCCTACATCTAGAAGGAGGACCGAAATTCCTGAATaGAGTTGCTGTCAAACACAC +
Preference number: 5 (lower is better)
Translates to: RIRAEFPFKSQMPTSRRRTEIPE*SCCQTH
Trigger: GTGTGTTTGACAGCAACTCAATTCAGGAATTTCGGT...CCTCCTTCTAGATGTAGGCATTTGGCTTTTAAAGGGGAACTCAGCTCTGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp CAGAAAAAGAGTCAAATCAGAGTCCCGAAACAAATAAGAGACTGCTTAACTTTATCCAAGGTTGGAAAGTaGCCTCGTCCGTGGATAGGT +
Preference number: 5 (lower is better)
Translates to: QKKSQIRVPKQIRDCLTLSKVGK*PRPWIG
Trigger: ACCTATCCACGGACGAGGCAACTTTCCAACCTTGGA...TAAAGTTAAGCAGTCTCTTATTTGTTTCGGGACTCTGATTTGACTCTTTTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp TCCCTTGAACAAAAATTAAGTCACAAGAGCACCCTCATGTTTACCATTTTCTGCACAGCTGTGTCATACTaGGAATGTGACCAAAGTGGG +
Preference number: 5 (lower is better)
Translates to: SLEQKLSHKSTLMFTIFCTAVSY*ECDQSG
Trigger: CCCACTTTGGTCACATTCCAAGTATGACACAGCTGT...GCAGAAAATGGTAAACATGAGGGTGCTCTTGTGACTTAATTTTTGTTCAAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp AGAATCAGAGCTGAGTTCCCCTTTAAAAGCCAAATGCCTACATCTAGAAGGAGGACACATCGGTCATTTTaGTGCAAACACATGCCATTT +
Preference number: 5 (lower is better)
Translates to: RIRAEFPFKSQMPTSRRRTHRSF*CKHMPF
Trigger: AAATGGCATGTGTTTGCACAAAAATGACCGATGTGT...CCTCCTTCTAGATGTAGGCATTTGGCTTTTAAAGGGGAACTCAGCTCTGATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp ATGCCGAAAGCATCAGAAAAAGAGTCAAATCAGAGTCCCGAAACAAATAAGAGAGGTCTCGTCTCACCATaGGATAACTACTTTGCTCTC +
Preference number: 5 (lower is better)
Translates to: MPKASEKESNQSPETNKRGLVSP*DNYFAL
Trigger: GAGAGCAAAGTAGTTATCCAATGGTGAGACGAGACC...TCTCTTATTTGTTTCGGGACTCTGATTTGACTCTTTTTCTGATGCTTTCGGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp ATGCCGAAAGCATCAGAAAAAGAGTCAAATCAGAGTCCCGAAACAAATAAGAGAAGGCAAGTGCTTATGTaGGTGGCTTCATCACATTTC +
Preference number: 5 (lower is better)
Translates to: MPKASEKESNQSPETNKRRQVLM*VASSHF
Trigger: GAAATGTGATGAAGCCACCAACATAAGCACTTGCCT...TCTCTTATTTGTTTCGGGACTCTGATTTGACTCTTTTTCTGATGCTTTCGGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp AGAATCAGAGCTGAGTTCCCCTTTAAAAGCCAAATGCCTACATCTAGAAGGAGGTTTAAAAGTACAGCTTaGGTCAGTGCAGCTTTTAAC +
Preference number: 5 (lower is better)
Translates to: RIRAEFPFKSQMPTSRRRFKSTA*VSAAFN
Trigger: GTTAAAAGCTGCACTGACCAAAGCTGTACTTTTAAA...CCTCCTTCTAGATGTAGGCATTTGGCTTTTAAAGGGGAACTCAGCTCTGATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS-3UTR CAA 90 bp CAGAAAAAGAGTCAAATCAGAGTCCCGAAACAAATAAGAGACTGCTTAACTTTAGCAAACACATGCCATTaGACCACCATGGCAGCTTTT +
Preference number: 5 (lower is better)
Translates to: QKKSQIRVPKQIRDCLTLANTCH*TTMAAF
Trigger: AAAAGCTGCCATGGTGGTCAAATGGCATGTGTTTGC...TAAAGTTAAGCAGTCTCTTATTTGTTTCGGGACTCTGATTTGACTCTTTTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CAA 72 bp CTGGGCAATAGAAGAGGAGGCGACAGAGGCAGGTCCTaGGCGTGGGCAGGCCCCAGCAGGAGCGGCGCGACC +
Preference number: 6 (lower is better)
Translates to: LGNRRGGDRGRS*AWAGPSRSGAT
Trigger: GGTCGCGCCGCTCCTGCTGGGGCCTGCCCACGCCAAGGACCTGCCTCTGTCGCCTCCTCTTCTATTGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CAA 90 bp CTGGGGAAACTGGGCAATAGAAGAGGAGGCGACAGAGGCAGGTCCTaGGCGTGGGCAGGCCCCAGCAGGAGCGGCGCGACCTCTACAGCC +
Preference number: 6 (lower is better)
Translates to: LGKLGNRRGGDRGRS*AWAGPSRSGATSTA
Trigger: GGCTGTAGAGGTCGCGCCGCTCCTGCTGGGGCCTGCCCACGCCAAGGACCTGCCTCTGTCGCCTCCTCTTCTATTGCCCAGTTTCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS GCA 72 bp ACGTGGCCAGCTGCGGAGCCATTCAGCCGGACGTCGTaGACTTTGATGCCTGCCTCCTCCAGCCGACTGCGG +
Preference number: 6 (lower is better)
Translates to: TWPAAEPFSRTS*TLMPASSSRLR
Trigger: CCGCAGTCGGCTGGAGGAGGCAGGCATCAAAGTGCACGACGTCCGGCTGAATGGCTCCGCAGCTGGCCACGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CAA 72 bp CCAGCTGCGGAGCCATTCAGCCGGACGTCGTGCACTTaGATGCCTGCCTCCTCCAGCCGACTGCGGACGGTC +
Preference number: 6 (lower is better)
Translates to: PAAEPFSRTSCT*MPASSSRLRTV
Trigger: GACCGTCCGCAGTCGGCTGGAGGAGGCAGGCATCAAAGTGCACGACGTCCGGCTGAATGGCTCCGCAGCTGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS TCA 72 bp CAGCTGCGGAGCCATTCAGCCGGACGTCGTGCACTTTaGTGCCTGCCTCCTCCAGCCGACTGCGGACGGTCT +
Preference number: 6 (lower is better)
Translates to: QLRSHSAGRRAL*CLPPPADCGRS
Trigger: AGACCGTCCGCAGTCGGCTGGAGGAGGCAGGCATCAAAGTGCACGACGTCCGGCTGAATGGCTCCGCAGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS GCA 72 bp GGAGCCATTCAGCCGGACGTCGTGCACTTTGATGCCTaGCTCCTCCAGCCGACTGCGGACGGTCTGGACGAT +
Preference number: 6 (lower is better)
Translates to: GAIQPDVVHFDA*LLQPTADGLDD
Trigger: ATCGTCCAGACCGTCCGCAGTCGGCTGGAGGAGGCAGGCATCAAAGTGCACGACGTCCGGCTGAATGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CAA 90 bp AAAACGTGGCCAGCTGCGGAGCCATTCAGCCGGACGTCGTGCACTTaGATGCCTGCCTCCTCCAGCCGACTGCGGACGGTCTGGACGATG +
Preference number: 6 (lower is better)
Translates to: KTWPAAEPFSRTSCT*MPASSSRLRTVWTM
Trigger: CATCGTCCAGACCGTCCGCAGTCGGCTGGAGGAGGCAGGCATCAAAGTGCACGACGTCCGGCTGAATGGCTCCGCAGCTGGCCACGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CAA 90 bp CGGCTGGTAGTAACAGGTGACGTTGGTGGCACTGGGGATGATGTTTaGTTCCGCCAGCACACGCAAGGCCAGGAGGGAGATGAGGTTCAG +
Preference number: 6 (lower is better)
Translates to: RLVVTGDVGGTGDDV*FRQHTQGQEGDEVQ
Trigger: CTGAACCTCATCTCCCTCCTGGCCTTGCGTGTGCTGGCGGAACAAAACATCATCCCCAGTGCCACCAACGTCACCTGTTACTACCAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CCA 72 bp TCTTTGCAGCCCAAGCCATTGTCTTTGACCAAAACGTaGCCAGCTGCGGAGCCATTCAGCCGGACGTCGTGC +
Preference number: 6 (lower is better)
Translates to: SLQPKPLSLTKT*PAAEPFSRTSC
Trigger: GCACGACGTCCGGCTGAATGGCTCCGCAGCTGGCCACGTTTTGGTCAAAGACAATGGCTTGGGCTGCAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CCA 72 bp GGGCAGCCAGGTAGGGTAAGGCTGGCTGTAGGTGACTaGAGGATGGGCAACGTAGTAGTTGCTGAAGTTGCC +
Preference number: 6 (lower is better)
Translates to: GQPGRVRLAVGD*RMGNVVVAEVA
Trigger: GGCAACTTCAGCAACTACTACGTTGCCCATCCTCCAGTCACCTACAGCCAGCCTTACCCTACCTGGCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CAA 90 bp TCCTGGTCTGTGGGCCTGAAGTCCCGCACAAGAAGGTTGCTGTACTaGAGAAGTCCCCCGCCTCTGATTTCTTCTGGGTTCTTGGTGGCG +
Preference number: 6 (lower is better)
Translates to: SWSVGLKSRTRRLLY*RSPPPLISSGFLVA
Trigger: CGCCACCAAGAACCCAGAAGAAATCAGAGGCGGGGGACTTCTCAAGTACAGCAACCTTCTTGTGCGGGACTTCAGGCCCACAGACCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS GCA 72 bp GCCCAAGCCATTGTCTTTGACCAAAACGTGGCCAGCTaGGGAGCCATTCAGCCGGACGTCGTGCACTTTGAT +
Preference number: 6 (lower is better)
Translates to: AQAIVFDQNVAS*GAIQPDVVHFD
Trigger: ATCAAAGTGCACGACGTCCGGCTGAATGGCTCCGCAGCTGGCCACGTTTTGGTCAAAGACAATGGCTTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CCA 72 bp TTGATGCCTGCCTCCTCCAGCCGACTGCGGACGGTCTaGACGATGTCCTTCAGAGTTATCTCCAAGGTTGGA +
Preference number: 6 (lower is better)
Translates to: LMPASSSRLRTV*TMSFRVISKVG
Trigger: TCCAACCTTGGAGATAACTCTGAAGGACATCGTCCAGACCGTCCGCAGTCGGCTGGAGGAGGCAGGCATCAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CAA 72 bp GTAACAGGTGACGTTGGTGGCACTGGGGATGATGTTTaGTTCCGCCAGCACACGCAAGGCCAGGAGGGAGAT +
Preference number: 6 (lower is better)
Translates to: VTGDVGGTGDDV*FRQHTQGQEGD
Trigger: ATCTCCCTCCTGGCCTTGCGTGTGCTGGCGGAACAAAACATCATCCCCAGTGCCACCAACGTCACCTGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS GCA 72 bp GAAGGACATGCAATCCCTGGTACAGCTGCTCTCCTCTaGCATCTTCAGGGGATGTTCTGGCTGGGGAAACTG +
Preference number: 6 (lower is better)
Translates to: EGHAIPGTAALL*HLQGMFWLGKL
Trigger: CAGTTTCCCCAGCCAGAACATCCCCTGAAGATGGCAGAGGAGAGCAGCTGTACCAGGGATTGCATGTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CAA 72 bp GTGGGCCTGAAGTCCCGCACAAGAAGGTTGCTGTACTaGAGAAGTCCCCCGCCTCTGATTTCTTCTGGGTTC +
Preference number: 6 (lower is better)
Translates to: VGLKSRTRRLLY*RSPPPLISSGF
Trigger: GAACCCAGAAGAAATCAGAGGCGGGGGACTTCTCAAGTACAGCAACCTTCTTGTGCGGGACTTCAGGCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CAA 72 bp TCCTGGTCTGTGGGCCTGAAGTCCCGCACAAGAAGGTaGCTGTACTTGAGAAGTCCCCCGCCTCTGATTTCT +
Preference number: 6 (lower is better)
Translates to: SWSVGLKSRTRR*LYLRSPPPLIS
Trigger: AGAAATCAGAGGCGGGGGACTTCTCAAGTACAGCAACCTTCTTGTGCGGGACTTCAGGCCCACAGACCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CAA 90 bp CCTACATCTAGAAGGAGGCTCCCCTACCTGAGAGCCCTAGCCCTATaGGGGTTCCCACTGTGGAAACCCTCAGGTCTCAAGGTTAGTTAC +
Preference number: 6 (lower is better)
Translates to: PTSRRRLPYLRALAL*GFPLWKPSGLKVSY
Trigger: GTAACTAACCTTGAGACCTGAGGGTTTCCACAGTGGGAACCCCAATAGGGCTAGGGCTCTCAGGTAGGGGAGCCTCCTTCTAGATGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS TCA 72 bp ACAACTTCAGTGAGGACCTCATGCAGCCGGCTAACCTaGTCCCAGTTGAGCACGCTGAAGGACATGCAATCC +
Preference number: 6 (lower is better)
Translates to: TTSVRTSCSRLT*SQLSTLKDMQS
Trigger: GGATTGCATGTCCTTCAGCGTGCTCAACTGGGATCAGGTTAGCCGGCTGCATGAGGTCCTCACTGAAGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS TCA 72 bp ACACGGTGCTCTCGTTCACCACCCTGCGAAGGATCATaGGGTAGTCGTACTTGCTTCTCTCTTCTTCAGCGA +
Preference number: 6 (lower is better)
Translates to: TRCSRSPPCEGS*GSRTCFSLLQR
Trigger: TCGCTGAAGAAGAGAGAAGCAAGTACGACTACCTCATGATCCTTCGCAGGGTGGTGAACGAGAGCACCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CAA 90 bp TTGATTTCTTCCTGGTCTGTGGGCCTGAAGTCCCGCACAAGAAGGTaGCTGTACTTGAGAAGTCCCCCGCCTCTGATTTCTTCTGGGTTC +
Preference number: 6 (lower is better)
Translates to: LISSWSVGLKSRTRR*LYLRSPPPLISSGF
Trigger: GAACCCAGAAGAAATCAGAGGCGGGGGACTTCTCAAGTACAGCAACCTTCTTGTGCGGGACTTCAGGCCCACAGACCAGGAAGAAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CAA 90 bp ACGGTCTGGACGATGTCCTTCAGAGTTATCTCCAAGGTTGGAAAGTaGCCTCGTCCGTGGATAGGTACAACTTCAGTGAGGACCTCATGC +
Preference number: 6 (lower is better)
Translates to: TVWTMSFRVISKVGK*PRPWIGTTSVRTSC
Trigger: GCATGAGGTCCTCACTGAAGTTGTACCTATCCACGGACGAGGCAACTTTCCAACCTTGGAGATAACTCTGAAGGACATCGTCCAGACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CCA 72 bp TCTGGGTTCTTGGTGGCGATCAGTCTGTTCTGCAGATaGTCAAAAGCTTCCTCAAAGTCCCCGTACATGCTC +
Preference number: 6 (lower is better)
Translates to: SGFLVAISLFCR*SKASSKSPYML
Trigger: GAGCATGTACGGGGACTTTGAGGAAGCTTTTGACCATCTGCAGAACAGACTGATCGCCACCAAGAACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CAA 90 bp TTGCTGTACTTGAGAAGTCCCCCGCCTCTGATTTCTTCTGGGTTCTaGGTGGCGATCAGTCTGTTCTGCAGATGGTCAAAAGCTTCCTCA +
Preference number: 6 (lower is better)
Translates to: LLYLRSPPPLISSGF*VAISLFCRWSKASS
Trigger: TGAGGAAGCTTTTGACCATCTGCAGAACAGACTGATCGCCACCAAGAACCCAGAAGAAATCAGAGGCGGGGGACTTCTCAAGTACAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CCA 72 bp AGAGTTATCTCCAAGGTTGGAAAGTTGCCTCGTCCGTaGATAGGTACAACTTCAGTGAGGACCTCATGCAGC +
Preference number: 6 (lower is better)
Translates to: RVISKVGKLPRP*IGTTSVRTSCS
Trigger: GCTGCATGAGGTCCTCACTGAAGTTGTACCTATCCACGGACGAGGCAACTTTCCAACCTTGGAGATAACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CCA 72 bp GGTCTGGACGATGTCCTTCAGAGTTATCTCCAAGGTTaGAAAGTTGCCTCGTCCGTGGATAGGTACAACTTC +
Preference number: 6 (lower is better)
Translates to: GLDDVLQSYLQG*KVASSVDRYNF
Trigger: GAAGTTGTACCTATCCACGGACGAGGCAACTTTCCAACCTTGGAGATAACTCTGAAGGACATCGTCCAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS CAA 72 bp TTGAGAAGTCCCCCGCCTCTGATTTCTTCTGGGTTCTaGGTGGCGATCAGTCTGTTCTGCAGATGGTCAAAA +
Preference number: 6 (lower is better)
Translates to: LRSPPPLISSGF*VAISLFCRWSK
Trigger: TTTTGACCATCTGCAGAACAGACTGATCGCCACCAAGAACCCAGAAGAAATCAGAGGCGGGGGACTTCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369448.4
CDS TCA 72 bp AGGATGATTTGGAAAGAGTCCACACTGAACTCAAACTaGCGCCGAATGGAGTCGACAAACTTCAGCTCCACG +
Preference number: 6 (lower is better)
Translates to: RMIWKESTLNSN*RRMESTNFSST
Trigger: CGTGGAGCTGAAGTTTGTCGACTCCATTCGGCGTCAGTTTGAGTTCAGTGTGGACTCTTTCCAAATCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369448.4