RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TENT5A (Homo sapiens)

Ensembl gene IDs: ENSG00000112773

Ensembl transcript IDs: ENST00000320172.11, ENST00000369754.7, ENST00000369756.3, ENST00000412306.1, ENST00000423467.1

Found 480 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTaGGGGAGACTGAGCCAAGATGGTAGTAGGAGGAGTTCCTTAGAA +
Preference number: 1 (lower is better)
Translates to: VSWEVAINFSNPGLK*GRLSQDGSRRSSLE
Trigger: TTCTAAGGAACTCCTCCTACTACCATCTTGGCTCAGTCTCCCTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR TCA 90 bp ATGCACGCAGCTGGAATTAATGGATTGTGTCATCATAAGTTCTGCTaGTTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAG +
Preference number: 1 (lower is better)
Translates to: MHAAGINGLCHHKFC*LLRELHQPTTVHLE
Trigger: CTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAGAACTTATGATGACACAATCCATTAATTCCAGCTGCGTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR TCA 90 bp TCACAACTTAAAATTCTTGCAGATTGTCTTCATTCTGAAAGCATGTaGCAGAAGCTTGCCCAGTCCCCTCAGACTTTGGACTCTTCTGTT +
Preference number: 1 (lower is better)
Translates to: SQLKILADCLHSESM*QKLAQSPQTLDSSV
Trigger: AACAGAAGAGTCCAAAGTCTGAGGGGACTGGGCAAGCTTCTGTCACATGCTTTCAGAATGAAGACAATCTGCAAGAATTTTAAGTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412306.1
3UTR GCA 90 bp TTAATGGATTGTGTCATCATAAGTTCTGCTGATTGTTACGAGAACTaGACCAACCTACTACTGTTCATTTGGAGCAAGCCGTTTGTTAGC +
Preference number: 1 (lower is better)
Translates to: LMDCVIISSADCYEN*TNLLLFIWSKPFVS
Trigger: GCTAACAAACGGCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAGAACTTATGATGACACAATCCATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR CCA 90 bp GGTCTTCGAGGAATTATCATAGCAAGCAGTCATCCACTAAGGTTGTaGAGATTATGTGGTTGTTTCACAACACAAAGGGAAGGTTCTTAT +
Preference number: 1 (lower is better)
Translates to: GLRGIIIASSHPLRL*RLCGCFTTQREGSY
Trigger: ATAAGAACCTTCCCTTTGTGTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATGATAATTCCTCGAAGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR CCA 90 bp CCTTCCTTGGTTTGGATTACACATATTCTTCCATCCTTGCATTTTTaGAGCTACATTATTAGTCCATCCAATACCAAAGTGAGCAGATAC +
Preference number: 1 (lower is better)
Translates to: PSLVWITHILPSLHF*SYIISPSNTKVSRY
Trigger: GTATCTGCTCACTTTGGTATTGGATGGACTAATAATGTAGCTCCAAAAATGCAAGGATGGAAGAATATGTGTAATCCAAACCAAGGAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR TCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCCTCTCCTGTCTTGTCTaGAATGGCTTCCCCACAGGA +
Preference number: 2 (lower is better)
Translates to: GNKSQALIGSRELFFSLTLSCLV*NGFPTG
Trigger: TCCTGTGGGGAAGCCATTTCAGACAAGACAGGAGAG...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR GCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCGAGCCTCCTCCGTTCTaGAAGGCTTTGCAGCAAGTC +
Preference number: 2 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSEPPPF*KALQQV
Trigger: GACTTGCTGCAAAGCCTTGCAGAACGGAGGAGGCTC...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR TCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCCGGCTGTTGCAGCTCTaGCAGAATTCACAAGGAAGC +
Preference number: 2 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSRLLQL*QNSQGS
Trigger: GCTTCCTTGTGAATTCTGTCAGAGCTGCAACAGCCG...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR TCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTACAGCCTGTTCTATATaGATAGGTGCCAGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSTACSI*IGARCW
Trigger: CCAGCACCTGGCACCTATTCATATAGAACAGGCTGT...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR GCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCCAGTGCAGCGGCTGTTaGAGCTCTGACAGAATTCAC +
Preference number: 2 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSQCSGC*SSDRIH
Trigger: GTGAATTCTGTCAGAGCTGCAACAGCCGCTGCACTG...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR GCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTAAGCAGATCACCAGCTaGTCCTGTGTTCACAAGTGC +
Preference number: 2 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSKQITS*SCVHKC
Trigger: GCACTTGTGAACACAGGAGCAGCTGGTGATCTGCTT...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR TCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTTAAGTGAGGGAGACTaGGCCAAGATGGTAGTAGGA +
Preference number: 2 (lower is better)
Translates to: GNKSQALIGSRELFFSLTLSEGD*AKMVVG
Trigger: TCCTACTACCATCTTGGCTCAGTCTCCCTCACTTAA...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR TCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCACAGCCTGTTCTATATaGATAGGTGCCAGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSTACSI*IGARCW
Trigger: CCAGCACCTGGCACCTATTCATATAGAACAGGCTGT...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR TCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCTGGTGTAGGAGTTCTTaGGGCAGCTGGATTTACTGC +
Preference number: 2 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSWCRSS*GSWIYC
Trigger: GCAGTAAATCCAGCTGCCTCAAGAACTCCTACACCA...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR GCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTCCACAGAAAGCACTTaGTACAAGCCTCAGACAGTA +
Preference number: 2 (lower is better)
Translates to: GNKSQALIGSRELFFSLTSTEST*YKPQTV
Trigger: TACTGTCTGAGGCTTGTAGCAAGTGCTTTCTGTGGA...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCCTGTCTTGTCTGAAATaGCTTCCCCACAGGACATTT +
Preference number: 2 (lower is better)
Translates to: GNKSQALIGSRELFFSLTLSCLK*LPHRTF
Trigger: AAATGTCCTGTGGGGAAGCCATTTCAGACAAGACAG...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTCCAGACGGATTAACCTaGATTAACCTAGCACTAAGC +
Preference number: 2 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSPDGLT*INLALS
Trigger: GCTTAGTGCTAGGTTAATCCAGGTTAATCCGTCTGG...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCAGCAGGTTATTGTTATaGCAGAGTCAGAGACCTCCA +
Preference number: 2 (lower is better)
Translates to: GNKSQALIGSRELFFSLTSRLLL*QSQRPP
Trigger: TGGAGGTCTCTGACTCTGCCATAACAATAACCTGCT...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR TCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATCTCTCCTGTCTTGTCTaGAATGGCTTCCCCACAGGA +
Preference number: 2 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHLSCLV*NGFPTG
Trigger: TCCTGTGGGGAAGCCATTTCAGACAAGACAGGAGAG...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR TCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTTCTGAACTCCTAAACTaGTTCACAAGTTGGAGTGAG +
Preference number: 2 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSSELLN*FTSWSE
Trigger: CTCACTCCAACTTGTGAATCAGTTTAGGAGTTCAGA...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR TCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATCGGCTGTTGCAGCTCTaGCAGAATTCACAAGGAAGC +
Preference number: 2 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHRLLQL*QNSQGS
Trigger: GCTTCCTTGTGAATTCTGTCAGAGCTGCAACAGCCG...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR TCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATAGTTCCTTAGAAAACTaGGTGGCAGTGCAGCGGCTG +
Preference number: 2 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHSSLEN*VAVQRL
Trigger: CAGCCGCTGCACTGCCACTCAGTTTTCTAAGGAACT...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR TCA 90 bp ATTCTGAAAGCATGTGACAGAAGCTTGCCCAGTCCCCTCAGACTTTGGACTCTTGTTGTCTTTTGCCAATaGGGTGAAGTAACTCACTCC +
Preference number: 2 (lower is better)
Translates to: ILKACDRSLPSPLRLWTLVVFCQ*GEVTHS
Trigger: GGAGTGAGTTACTTCACCTCATTGGCAAAAGACAAC...AAGAGTCCAAAGTCTGAGGGGACTGGGCAAGCTTCTGTCACATGCTTTCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412306.1
3UTR-3UTR GCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCAATTCACAAGGAAGCTaGTACAGCAAACCCATCAGG +
Preference number: 2 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSNSQGS*YSKPIR
Trigger: CCTGATGGGTTTGCTGTAGCAGCTTCCTTGTGAATT...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR GCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTTCCTGTGTTCACAAGTaGTCCCCTAGTTTTCTTTCA +
Preference number: 2 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSSCVHK*SPSFLS
Trigger: TGAAAGAAAACTAGGGGAGCACTTGTGAACACAGGA...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR GCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCTTCTATATGAATAGGTaGCAGGTGCTGGCACTTCCA +
Preference number: 2 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSFYMNR*QVLALP
Trigger: TGGAAGTGCCAGCACCTGGCACCTATTCATATAGAA...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCCTGTCTTGTCTGAAATaGCTTCCCCACAGGACATTT +
Preference number: 2 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSLSCLK*LPHRTF
Trigger: AAATGTCCTGTGGGGAAGCCATTTCAGACAAGACAG...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATAAGCAGGCGGAGCTCTaGTTTCTGATAGGTGAGTGC +
Preference number: 2 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHKQAEL*FLIGEC
Trigger: GCACTCACCTATCAGAAACCAGAGCTCCGCCTGCTT...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCTCTGACCTATACACATaGCTCTCTCTCACCAGACAT +
Preference number: 2 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSSDLYT*LSLTRH
Trigger: ATGTCTGGTGAGAGAGAGCCATGTGTATAGGTCAGA...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR CAA 90 bp GGCAGCTGGATTTACTGCAAATTAAGTAAACCTTTAAAAACGGCATaGTCACAGGCTATGTGTTCTCTGACATGCCAGGCTGGACAGGTG +
Preference number: 2 (lower is better)
Translates to: GSWIYCKLSKPLKTA*SQAMCSLTCQAGQV
Trigger: CACCTGTCCAGCCTGGCATGTCAGAGAACACATAGCCTGTGACAATGCCGTTTTTAAAGGTTTACTTAATTTGCAGTAAATCCAGCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR GCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCTCCTGTGTTCACAAGTaGTCCCCTAGTTTTCTTTCA +
Preference number: 2 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSSCVHK*SPSFLS
Trigger: TGAAAGAAAACTAGGGGAGCACTTGTGAACACAGGA...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCCTACTACTGTTCATTTaGAGCAAGCCGTTTGTTAGC +
Preference number: 2 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSLLLFI*SKPFVS
Trigger: GCTAACAAACGGCTTGCTCCAAATGAACAGTAGTAG...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTCATCCACTAAGGTTGTaGAGATTATGTGGTTGTTTC +
Preference number: 2 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSHPLRL*RLCGCF
Trigger: GAAACAACCACATAATCTCCACAACCTTAGTGGATG...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR TCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCTCTGAACTCCTAAACTaGTTCACAAGTTGGAGTGAG +
Preference number: 2 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASSELLN*FTSWSE
Trigger: CTCACTCCAACTTGTGAATCAGTTTAGGAGTTCAGA...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR GCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCGGAGCATATCATCATTaGACAAAACACATCCCTAAT +
Preference number: 2 (lower is better)
Translates to: GNKSQALIGSRELFFSLTGAYHH*TKHIPN
Trigger: ATTAGGGATGTGTTTTGTGCAATGATGATATGCTCC...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTCTGTCTTGTCTGAAATaGCTTCCCCACAGGACATTT +
Preference number: 2 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCLSCLK*LPHRTF
Trigger: AAATGTCCTGTGGGGAAGCCATTTCAGACAAGACAG...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR GCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATTCCACAGAAAGCACTTaGTACAAGCCTCAGACAGTA +
Preference number: 2 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHSTEST*YKPQTV
Trigger: TACTGTCTGAGGCTTGTAGCAAGTGCTTTCTGTGGA...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTTGTATCAGGAGAACCTaGTTGCTTCTAATGACAGGT +
Preference number: 2 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCCIRRT*LLLMTG
Trigger: ACCTGTCATTAGAAGCAACCAGGTTCTCCTGATACA...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR CAA 90 bp TTTTTCCTATGGCAAAGCTATGGGAGCAGATACAGCAAACCCATATaGTCATCACACATTTCTTCTCTTGTATCAGGAGAACCTGGTTGC +
Preference number: 2 (lower is better)
Translates to: FFLWQSYGSRYSKPI*SSHISSLVSGEPGC
Trigger: GCAACCAGGTTCTCCTGATACAAGAGAAGAAATGTGTGATGACAATATGGGTTTGCTGTATCTGCTCCCATAGCTTTGCCATAGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR CAA 90 bp TTGGGTCTTCGAGGAATTATCATAGCAAGCAGTCATCCACTAAGGTaGTGGAGATTATGTGGTTGTTTCACAACACAAAGGGAAGGTTCT +
Preference number: 2 (lower is better)
Translates to: LGLRGIIIASSHPLR*WRLCGCFTTQREGS
Trigger: AGAACCTTCCCTTTGTGTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATGATAATTCCTCGAAGACCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR TCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATCTAGCACTAAGCATCTaGGGATCCCTAGATAAACAA +
Preference number: 2 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHLALSI*GSLDKQ
Trigger: TTGTTTATCTAGGGATCCTCAGATGCTTAGTGCTAG...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACTGTATCAGGAGAACCTaGTTGCTTCTAATGACAGGT +
Preference number: 2 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNCIRRT*LLLMTG
Trigger: ACCTGTCATTAGAAGCAACCAGGTTCTCCTGATACA...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTACTACTACTGTTCATTTaGAGCAAGCCGTTTGTTAGC +
Preference number: 2 (lower is better)
Translates to: ERCTKGSPDGLTWINLALLLLFI*SKPFVS
Trigger: GCTAACAAACGGCTTGCTCCAAATGAACAGTAGTAG...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCTTTCCTTCCTTGGTTTaGATTACACATATTCTTCCA +
Preference number: 2 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSFPSLV*ITHILP
Trigger: TGGAAGAATATGTGTAATCCAAACCAAGGAAGGAAA...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR TCA 90 bp ATTTTGAACTCTTGGAGAGAAAGTCTGCTTACTTCATATAAATCAGATGGGGTTCATTCTGAAAGCATGTaGCAGAAGCTTGCCCAGTCC +
Preference number: 2 (lower is better)
Translates to: ILNSWRESLLTSYKSDGVHSESM*QKLAQS
Trigger: GGACTGGGCAAGCTTCTGTCACATGCTTTCAGAATG...AACCCCATCTGATTTATATGAAGTAAGCAGACTTTCTCTCCAAGAGTTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412306.1
3UTR-3UTR GCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTATTCATCATTGCAATATaGCCACGTCTCATGTTATCC +
Preference number: 2 (lower is better)
Translates to: ERCTKGSPDGLTWINLALFIIAI*PRLMLS
Trigger: GGATAACATGAGACGTGGGCATATTGCAATGATGAA...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR GCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACTTCATCATTGCAATATaGCCACGTCTCATGTTATCC +
Preference number: 2 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNFIIAI*PRLMLS
Trigger: GGATAACATGAGACGTGGGCATATTGCAATGATGAA...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR GCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGAATTCACAAGGAAGCTaGTACAGCAAACCCATCAGG +
Preference number: 2 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSENSQGS*YSKPIR
Trigger: CCTGATGGGTTTGCTGTAGCAGCTTCCTTGTGAATT...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGCCAGACGGATTAACCTaGATTAACCTAGCACTAAGC +
Preference number: 2 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEPDGLT*INLALS
Trigger: GCTTAGTGCTAGGTTAATCCAGGTTAATCCGTCTGG...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR TCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTACCTATTACTGATCCATaGTCCACTAGATTAAACATC +
Preference number: 2 (lower is better)
Translates to: ERCTKGSPDGLTWINLALPITDP*STRLNI
Trigger: GATGTTTAATCTAGTGGATCATGGATCAGTAATAGG...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR TCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGCTAGCACTAAGCATCTaGGGATCCCTAGATAAACAA +
Preference number: 2 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSELALSI*GSLDKQ
Trigger: TTGTTTATCTAGGGATCCTCAGATGCTTAGTGCTAG...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR GCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGGATTGTTACGAGAACTaGACCAACCTACTACTGTTC +
Preference number: 2 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEDCYEN*TNLLLF
Trigger: GAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATC...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGCTACTACTGTTCATTTaGAGCAAGCCGTTTGTTAGC +
Preference number: 2 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSELLLFI*SKPFVS
Trigger: GCTAACAAACGGCTTGCTCCAAATGAACAGTAGTAG...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CCA 90 bp ACTCTTGGAGAGAAAGTCTGCTTACTTCATATAAATCAGATGGGGTTTACACTGAGTCCCCTCAGACTTTaGACTCTTCTGTTGTCTTTT +
Preference number: 2 (lower is better)
Translates to: TLGEKVCLLHINQMGFTLSPLRL*TLLLSF
Trigger: AAAAGACAACAGAAGAGTCCAAAGTCTGAGGGGACT...CAGTGTAAACCCCATCTGATTTATATGAAGTAAGCAGACTTTCTCTCCAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412306.1
3UTR-3UTR CCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATTATCTGTTAAATCTTTaGTCCTTGAGCACACTTTCT +
Preference number: 2 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHYLLNL*SLSTLS
Trigger: AGAAAGTGTGCTCAAGGACCAAAGATTTAACAGATA...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTATATCTGTTAAATCTTTaGTCCTTGAGCACACTTTCT +
Preference number: 2 (lower is better)
Translates to: ERCTKGSPDGLTWINLALYLLNL*SLSTLS
Trigger: AGAAAGTGTGCTCAAGGACCAAAGATTTAACAGATA...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGCATCCACTAAGGTTGTaGAGATTATGTGGTTGTTTC +
Preference number: 2 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEHPLRL*RLCGCF
Trigger: GAAACAACCACATAATCTCCACAACCTTAGTGGATG...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR CAA 90 bp TATCATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTaGTTTCACAACACAAAGGGAAGGTTCTTATGTGTTAGTTTTGTT +
Preference number: 2 (lower is better)
Translates to: YHSKQSSTKVVEIMW*FHNTKGRFLCVSFV
Trigger: AACAAAACTAACACATAAGAACCTTCCCTTTGTGTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR GCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGGGAGCATATCATCATTaGACAAAACACATCCCTAAT +
Preference number: 2 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEGAYHH*TKHIPN
Trigger: ATTAGGGATGTGTTTTGTGCAATGATGATATGCTCC...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR TCA 90 bp ATTTTGAACTCTTGGAGAGAAAGTCTGCTTACTTCATATAAATCAGATGGGGTTAGATTGTCTTCATTCTaGAAGCATGTGACAGAAGCT +
Preference number: 2 (lower is better)
Translates to: ILNSWRESLLTSYKSDGVRLSSF*KHVTEA
Trigger: AGCTTCTGTCACATGCTTTCAGAATGAAGACAATCT...AACCCCATCTGATTTATATGAAGTAAGCAGACTTTCTCTCCAAGAGTTCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412306.1
3UTR-3UTR CCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGATATTCTCCCATTTGTaGAATTTTATGGCTCACCAA +
Preference number: 2 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEIFSHL*NFMAHQ
Trigger: TTGGTGAGCCATAAAATTCCACAAATGGGAGAATAT...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CCA 90 bp AACTCTTGGAGAGAAAGTCTGCTTACTTCATATAAATCAGATGGGGTTTACACTCCAAAATCTCTCATGTaGAGATTTGGCTACTTTTCA +
Preference number: 2 (lower is better)
Translates to: NSWRESLLTSYKSDGVYTPKSLM*RFGYFS
Trigger: TGAAAAGTAGCCAAATCTCCACATGAGAGATTTTGG...AGTGTAAACCCCATCTGATTTATATGAAGTAAGCAGACTTTCTCTCCAAGAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412306.1
3UTR-3UTR CAA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCACAGTAATCCCAACGTaGGAGTTCCCCTTTTTCCTG +
Preference number: 3 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASTVIPT*EFPFFL
Trigger: CAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGT...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCTTCCACAGAAAGCACTaGCTACAAGCCTCAGACAGT +
Preference number: 3 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASFHRKH*LQASDS
Trigger: ACTGTCTGAGGCTTGTAGCAAGTGCTTTCTGTGGAA...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCGTGGAGATTATGTGGTaGTTTCACAACACAAAGGGA +
Preference number: 3 (lower is better)
Translates to: GNKSQALIGSRELFFSLTVEIMW*FHNTKG
Trigger: TCCCTTTGTGTTGTGAAACAACCACATAATCTCCAC...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCAGTCATCCACTAAGGTaGTGGAGATTATGTGGTTGT +
Preference number: 3 (lower is better)
Translates to: GNKSQALIGSRELFFSLTSHPLR*WRLCGC
Trigger: ACAACCACATAATCTCCACAACCTTAGTGGATGACT...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR TCA 72 bp TGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTaGCCCAAGGTGCAGCTTGCTGCAACAGAACACCTC +
Preference number: 3 (lower is better)
Translates to: CDAAYSQNIPKE*PKVQLAATEHL
Trigger: GAGGTGTTCTGTTGCAGCAAGCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR GCA 72 bp AGTTGTCTTGAGTACAGCCTGTTCTATATGAATAGGTaGCAGGTGCTGGCACTTCCAACTAAGCTACCAACC +
Preference number: 3 (lower is better)
Translates to: SCLEYSLFYMNR*QVLALPTKLPT
Trigger: GGTTGGTAGCTTAGTTGGAAGTGCCAGCACCTGGCACCTATTCATATAGAACAGGCTGTACTCAAGACAACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR CCA 72 bp ATTGTCACAGGCTATGTGTTCTCTGACATGCCAGGCTaGACAGGTGAGAAGAGCCTCCAAAAGACAAAACTT +
Preference number: 3 (lower is better)
Translates to: IVTGYVFSDMPG*TGEKSLQKTKL
Trigger: AAGTTTTGTCTTTTGGAGGCTCTTCTCACCTGTCCAGCCTGGCATGTCAGAGAACACATAGCCTGTGACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTATCAGGAGAACCTGGTaGCTTCTAATGACAGGTCTC +
Preference number: 3 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCIRRTW*LLMTGL
Trigger: GAGACCTGTCATTAGAAGCAACCAGGTTCTCCTGAT...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCCACACATTTCTTCTCTaGTATCAGGAGAACCTGGTT +
Preference number: 3 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSHTFLL*YQENLV
Trigger: AACCAGGTTCTCCTGATACAAGAGAAGAAATGTGTG...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCGTGGAGATTATGTGGTaGTTTCACAACACAAAGGGA +
Preference number: 3 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSVEIMW*FHNTKG
Trigger: TCCCTTTGTGTTGTGAAACAACCACATAATCTCCAC...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCAGTCATCCACTAAGGTaGTGGAGATTATGTGGTTGT +
Preference number: 3 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSSHPLR*WRLCGC
Trigger: ACAACCACATAATCTCCACAACCTTAGTGGATGACT...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTATTAACAGCAGGTTATaGTTATGGCAGAGTCAGAGA +
Preference number: 3 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSINSRL*LWQSQR
Trigger: TCTCTGACTCTGCCATAACAATAACCTGCTGTTAAT...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTATGCTAGAAGTTGTCTaGAGTACAGCCTGTTCTATA +
Preference number: 3 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSMLEVV*STACSI
Trigger: TATAGAACAGGCTGTACTCAAGACAACTTCTAGCAT...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR GCA 72 bp TTGTCAAGAGTTAGGGTAAGAAAGCAGATCACCAGCTaGTCCTGTGTTCACAAGTGCTCCCCTAGTTTTCTT +
Preference number: 3 (lower is better)
Translates to: LSRVRVRKQITS*SCVHKCSPSFL
Trigger: AAGAAAACTAGGGGAGCACTTGTGAACACAGGAGCAGCTGGTGATCTGCTTTCTTACCCTAACTCTTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR GCA 72 bp CCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTaGAGCTTGCTGCAACAGAACACCTCAAAGCAGGCA +
Preference number: 3 (lower is better)
Translates to: PIVKIFQKSDPR*SLLQQNTSKQA
Trigger: TGCCTGCTTTGAGGTGTTCTGTTGCAGCAAGCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAATCAGGAGAACCTGGTaGCTTCTAATGACAGGTCTC +
Preference number: 3 (lower is better)
Translates to: ERCTKGSPDGLTWINLALIRRTW*LLMTGL
Trigger: GAGACCTGTCATTAGAAGCAACCAGGTTCTCCTGAT...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCCACACATTTCTTCTCTaGTATCAGGAGAACCTGGTT +
Preference number: 3 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASHTFLL*YQENLV
Trigger: AACCAGGTTCTCCTGATACAAGAGAAGAAATGTGTG...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACACAGTAATCCCAACGTaGGAGTTCCCCTTTTTCCTG +
Preference number: 3 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNTVIPT*EFPFFL
Trigger: CAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGT...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTATTCCACAGAAAGCACTaGCTACAAGCCTCAGACAGT +
Preference number: 3 (lower is better)
Translates to: ERCTKGSPDGLTWINLALFHRKH*LQASDS
Trigger: ACTGTCTGAGGCTTGTAGCAAGTGCTTTCTGTGGAA...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATTTCCACAGAAAGCACTaGCTACAAGCCTCAGACAGT +
Preference number: 3 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHFHRKH*LQASDS
Trigger: ACTGTCTGAGGCTTGTAGCAAGTGCTTTCTGTGGAA...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCTTTGGAGCAAGCCGTTaGTTAGCAAAACAAGATCAT +
Preference number: 3 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSFGASR*LAKQDH
Trigger: ATGATCTTGTTTTGCTAACAAACGGCTTGCTCCAAA...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCCAAATATTCTCCCATTaGTGGAATTTTATGGCTCAC +
Preference number: 3 (lower is better)
Translates to: GNKSQALIGSRELFFSLTQIFSH*WNFMAH
Trigger: GTGAGCCATAAAATTCCACAAATGGGAGAATATTTG...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCTTCTTTCAGAAAACTTaGAAACAACTAAGCAGGCGG +
Preference number: 3 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSFFQKT*KQLSRR
Trigger: CCGCCTGCTTAGTTGTTTCAAAGTTTTCTGAAAGAA...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCGCAAGTCTCGTTAACTaGACATCTTCCAACTTTGTA +
Preference number: 3 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSASLVN*TSSNFV
Trigger: TACAAAGTTGGAAGATGTCAAGTTAACGAGACTTGC...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp AACTCTTGGAGAGAAAGTCTGCTTACTTCATATAAATCAGATGGGGTTTACACTGCATGTGACAGAAGCTaGCCCAGTCCCCTCAGACTT +
Preference number: 3 (lower is better)
Translates to: NSWRESLLTSYKSDGVYTACDRS*PSPLRL
Trigger: AAGTCTGAGGGGACTGGGCAAGCTTCTGTCACATGC...AGTGTAAACCCCATCTGATTTATATGAAGTAAGCAGACTTTCTCTCCAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412306.1
3UTR TCA 72 bp GAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTaGGGGAGACTGAGCCAAGATGGTAGTAGGAGGAGT +
Preference number: 3 (lower is better)
Translates to: EVAINFSNPGLK*GRLSQDGSRRS
Trigger: ACTCCTCCTACTACCATCTTGGCTCAGTCTCCCTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCTTATCTGTTAAATCTTaGGTCCTTGAGCACACTTTC +
Preference number: 3 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSLSVKS*VLEHTF
Trigger: GAAAGTGTGCTCAAGGACCAAAGATTTAACAGATAA...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTACACACATTTCTTCTCTaGTATCAGGAGAACCTGGTT +
Preference number: 3 (lower is better)
Translates to: ERCTKGSPDGLTWINLALHTFLL*YQENLV
Trigger: AACCAGGTTCTCCTGATACAAGAGAAGAAATGTGTG...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGACAGTAATCCCAACGTaGGAGTTCCCCTTTTTCCTG +
Preference number: 3 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSETVIPT*EFPFFL
Trigger: CAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGT...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACTTTGGAGCAAGCCGTTaGTTAGCAAAACAAGATCAT +
Preference number: 3 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNFGASR*LAKQDH
Trigger: ATGATCTTGTTTTGCTAACAAACGGCTTGCTCCAAA...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp AACTCTTGGAGAGAAAGTCTGCTTACTTCATATAAATCAGATGGGGTTTACACTCAGTCCCCTCAGACTTaGGACTCTTCTGTTGTCTTT +
Preference number: 3 (lower is better)
Translates to: NSWRESLLTSYKSDGVYTQSPQT*DSSVVF
Trigger: AAAGACAACAGAAGAGTCCAAAGTCTGAGGGGACTG...AGTGTAAACCCCATCTGATTTATATGAAGTAAGCAGACTTTCTCTCCAAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412306.1
3UTR-3UTR CAA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTATTATCTGTTAAATCTTaGGTCCTTGAGCACACTTTC +
Preference number: 3 (lower is better)
Translates to: ERCTKGSPDGLTWINLALLSVKS*VLEHTF
Trigger: GAAAGTGTGCTCAAGGACCAAAGATTTAACAGATAA...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTACAAATATTCTCCCATTaGTGGAATTTTATGGCTCAC +
Preference number: 3 (lower is better)
Translates to: ERCTKGSPDGLTWINLALQIFSH*WNFMAH
Trigger: GTGAGCCATAAAATTCCACAAATGGGAGAATATTTG...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGGTGGAGATTATGTGGTaGTTTCACAACACAAAGGGA +
Preference number: 3 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEVEIMW*FHNTKG
Trigger: TCCCTTTGTGTTGTGAAACAACCACATAATCTCCAC...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR TCA 72 bp GCTGGAATTAATGGATTGTGTCATCATAAGTTCTGCTaGTTGTTACGAGAACTGCACCAACCTACTACTGTT +
Preference number: 3 (lower is better)
Translates to: AGINGLCHHKFC*LLRELHQPTTV
Trigger: AACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAGAACTTATGATGACACAATCCATTAATTCCAGC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR-3UTR CAA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGGGATTTAATTCATCATaGCAATATGCCCACGTCTCA +
Preference number: 3 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEGFNSS*QYAHVS
Trigger: TGAGACGTGGGCATATTGCAATGATGAATTAAATCC...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR GCA 72 bp CTTCCTTGGTTTGGATTACACATATTCTTCCATCCTTaGATTTTTGGAGCTACATTATTAGTCCATCCAATA +
Preference number: 3 (lower is better)
Translates to: LPWFGLHIFFHP*IFGATLLVHPI
Trigger: TATTGGATGGACTAATAATGTAGCTCCAAAAATGCAAGGATGGAAGAATATGTGTAATCCAAACCAAGGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GCATGTGACAGAAGCTTGCCCAGTCCCCTCAGACTTTGGACTCTTCTGTTGTCTTGGCTGCCGAGCCGTTaGGGCGCACGTCGCGGACGC +
Preference number: 4 (lower is better)
Translates to: ACDRSLPSPLRLWTLLLSWLPSR*GARRGR
Trigger: GCGTCCGCGACGTGCGCCTCAACGGCTCGGCAGCCA...AGACAACAGAAGAGTCCAAAGTCTGAGGGGACTGGGCAAGCTTCTGTCACATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412306.1
CDS-3UTR TCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTGGCTGCCGAGCCGTTaGGGCGCACGTCGCGGACGC +
Preference number: 4 (lower is better)
Translates to: GNKSQALIGSRELFFSLTWLPSR*GARRGR
Trigger: GCGTCCGCGACGTGCGCCTCAACGGCTCGGCAGCCA...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCCGTCGCGGACGCCAATaGGCTTCTCGGCCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSRRGRQ*ASRPGA
Trigger: GGCGCCTGGCCGAGAAGCGCATTGGCGTCCGCGACG...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CTGAAAGCATGTGACAGAAGCTTGCCCAGTCCCCTCAGACTTTGGACTCTTCTGAGGCCGCTGTCCTGGTaGAGGACATGGCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LKACDRSLPSPLRLWTLLRPLSW*RTWLAA
Trigger: GGCAGCCAGCCATGTCCTGCACCAGGACAGCGGCCT...CAGAAGAGTCCAAAGTCTGAGGGGACTGGGCAAGCTTCTGTCACATGCTTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412306.1
CDS-3UTR GCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCCGCTGCCACCCCAGCTaGGGTGGTCCCGAACTGGCG +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASRCHPS*GGPELA
Trigger: CGCCAGTTCGGGACCACCGCAGCTGGGGTGGCAGCG...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCCAGACCCCTGCCGCCTaGGCTCACCACTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASQTPAA*AHHSLP
Trigger: GGGGAGGGAGTGGTGAGCGCAGGCGGCAGGGGTCTG...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320172.11
ENST00000369754.7
CDS-3UTR GCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCAATGCCCACCGAAGCTaGCGCCACCGCCGAAGTCGC +
Preference number: 4 (lower is better)
Translates to: GNKSQALIGSRELFFSLTNAHRS*RHRRSR
Trigger: GCGACTTCGGCGGTGGCGGCAGCTTCGGTGGGCATT...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCCAGGACATGGCTGGCTaGCGAGCCGTTGAGGCGCAC +
Preference number: 4 (lower is better)
Translates to: GNKSQALIGSRELFFSLTQDMAG*RAVEAH
Trigger: GTGCGCCTCAACGGCTCGGCAGCCAGCCATGTCCTG...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTCCCAGGCCGCTGTCCTaGTGCAGGACATGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSPRPLS*CRTWLA
Trigger: AGCCAGCCATGTCCTGCACCAGGACAGCGGCCTGGG...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTCGCTGCCACCCCAGCTaGGGTGGTCCCGAACTGGCG +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCRCHPS*GGPELA
Trigger: CGCCAGTTCGGGACCACCGCAGCTGGGGTGGCAGCG...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTACCCCTCCTGCGCCGCTaGCACCCCAGCTGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALPLLRR*HPSCGG
Trigger: ACCACCGCAGCTGGGGTGGCAGCGGCGCAGGAGGGG...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTCTTTCCCAGACCCCTaGCGCCTGCGCTCACCACTC +
Preference number: 4 (lower is better)
Translates to: GNKSQALIGSRELFFSLTSFPDP*RLRSPL
Trigger: GAGTGGTGAGCGCAGGCGGCAGGGGTCTGGGAAAGA...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320172.11
ENST00000369754.7
CDS-3UTR GCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTTCTTTCCCAGACCCCTaGCGCCTGCGCTCACCACTC +
Preference number: 4 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSSFPDP*RLRSPL
Trigger: GAGTGGTGAGCGCAGGCGGCAGGGGTCTGGGAAAGA...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320172.11
ENST00000369754.7
CDS-3UTR GCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCGGGGGATGTAGGGGCTaGAGGCCAGCTCGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSGGCRG*RPARPQ
Trigger: CTGAGGACGAGCTGGCCTGCAGCCCCTACATCCCCC...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTCGTCGCGGACGCCAATaGGCTTCTCGGCCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCRRGRQ*ASRPGA
Trigger: GGCGCCTGGCCGAGAAGCGCATTGGCGTCCGCGACG...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCAGGCCGCTGTCCTGGTaGAGGACATGGCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSRPLSW*RTWLAA
Trigger: GGCAGCCAGCCATGTCCTGCACCAGGACAGCGGCCT...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCCCACCCCAGCTGCGGTaGTCCCGAACTGGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASPPQLR*SRTGGS
Trigger: AGAGCCGCCAGTTCGGGACCACCGCAGCTGGGGTGG...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp TGTGACAGAAGCTTGCCCAGTCCCCTCAGACTTTGGACTCTTCTGTTGTCTTTTCCCAGGCCGCTGTCCTaGTGCAGGACATGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: CDRSLPSPLRLWTLLLSFPRPLS*CRTWLA
Trigger: AGCCAGCCATGTCCTGCACCAGGACAGCGGCCTGGG...AAAAGACAACAGAAGAGTCCAAAGTCTGAGGGGACTGGGCAAGCTTCTGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412306.1
CDS-3UTR CCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCAGCGCCACTTGGCCCTaGTCAGTCCACTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSSATWP*SVHSLP
Trigger: GGGGAGGGAGTGGACTGACCAGGGCCAAGTGGCGCT...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369756.3
CDS-3UTR TCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTACGTCCTTCACAGTCTaGAACTCCCCTTCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSTSFTV*NSPSPR
Trigger: GCGCGGGGAAGGGGAGTTTCAGACTGTGAAGGACGT...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTACTGGCGGCTCTTGCTaGCACACACGCTCGTGTCTC +
Preference number: 4 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSTGGSC*HTRSCL
Trigger: GAGACACGAGCGTGTGTGGCAGCAAGAGCCGCCAGT...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCCGAACTGGCGGCTCTTaGTGCCACACACGCTCGTGT +
Preference number: 4 (lower is better)
Translates to: GNKSQALIGSRELFFSLTRTGGS*CHTRSC
Trigger: ACACGAGCGTGTGTGGCAGCAAGAGCCGCCAGTTCG...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCAATGCCCACCGAAGCTaGCGCCACCGCCGAAGTCGC +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASNAHRS*RHRRSR
Trigger: GCGACTTCGGCGGTGGCGGCAGCTTCGGTGGGCATT...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCGCGGTGGTCCCGAACTaGCGGCTCTTGCTGCCACAC +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASAVVPN*RLLLPH
Trigger: GTGTGGCAGCAAGAGCCGCCAGTTCGGGACCACCGC...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCCCCGTCTGTGTCACCTaGAGGCGGCCGCCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASPVCVT*RRPPLL
Trigger: TAGAAGGGGCGGCCGCCTCCAGGTGACACAGACGGG...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369754.7
CDS-3UTR CCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTCCGCCGAGCGCCACTTaGCCCTGGTCAGTCCACTCC +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCPPSAT*PWSVHS
Trigger: GGAGTGGACTGACCAGGGCCAAGTGGCGCTCGGCGG...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369756.3
CDS-3UTR TCA 90 bp TGTGACAGAAGCTTGCCCAGTCCCCTCAGACTTTGGACTCTTCTGTTGTCTTTTACGTCCTTCACAGTCTaGAACTCCCCTTCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: CDRSLPSPLRLWTLLLSFTSFTV*NSPSPR
Trigger: GCGCGGGGAAGGGGAGTTTCAGACTGTGAAGGACGT...AAAAGACAACAGAAGAGTCCAAAGTCTGAGGGGACTGGGCAAGCTTCTGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000412306.1
CDS-3UTR TCA 90 bp TTCATGTCCCATCAGGCACACTGTGCTCTCATTTACCACTCCATGAAGGGTCATACGTCCTTCACAGTCTaGAACTCCCCTTCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: FMSHQAHCALIYHSMKGHTSFTV*NSPSPR
Trigger: GCGCGGGGAAGGGGAGTTTCAGACTGTGAAGGACGT...ATGACCCTTCATGGAGTGGTAAATGAGAGCACAGTGTGCCTGATGGGACATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423467.1
CDS-3UTR GCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGCCCCTCCTGCGCCGCTaGCACCCCAGCTGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEPLLRR*HPSCGG
Trigger: ACCACCGCAGCTGGGGTGGCAGCGGCGCAGGAGGGG...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTGCGGTGGTCCCGAACTaGCGGCTCTTGCTGCCACAC +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCAVVPN*RLLLPH
Trigger: GTGTGGCAGCAAGAGCCGCCAGTTCGGGACCACCGC...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTACCACCCCAGCTGCGGTaGTCCCGAACTGGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALPPQLR*SRTGGS
Trigger: AGAGCCGCCAGTTCGGGACCACCGCAGCTGGGGTGG...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATAGCGCCACTTGGCCCTaGTCAGTCCTGGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHSATWP*SVLEAA
Trigger: GGCCGCCTCCAGGACTGACCAGGGCCAAGTGGCGCT...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320172.11
CDS-3UTR TCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCACGTCCTTCACAGTCTaGAACTCCCCTTCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASTSFTV*NSPSPR
Trigger: GCGCGGGGAAGGGGAGTTTCAGACTGTGAAGGACGT...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTAGGCTATGTGTTCTCTaGCATGCCAGGCTGGACAGG +
Preference number: 4 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSRLCVL*HARLDR
Trigger: CCTGTCCAGCCTGGCATGTCAGAGAACACATAGCCT...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCACTGGCGGCTCTTGCTaGCACACACGCTCGTGTCTC +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASTGGSC*HTRSCL
Trigger: GAGACACGAGCGTGTGTGGCAGCAAGAGCCGCCAGT...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATGGGGGATGTAGGGGCTaGAGGCCAGCTCGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHGGCRG*RPARPQ
Trigger: CTGAGGACGAGCTGGCCTGCAGCCCCTACATCCCCC...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAGGGGGATGTAGGGGCTaGAGGCCAGCTCGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALGGCRG*RPARPQ
Trigger: CTGAGGACGAGCTGGCCTGCAGCCCCTACATCCCCC...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTACGATCAGGCTCGGCTaGAGCTCGAGCGTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCTIRLG*SSSVGK
Trigger: CTTCCCCACGCTCGAGCTGCAGCCGAGCCTGATCGT...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATCAGGACATGGCTGGCTaGCGAGCCGTTGAGGCGCAC +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHQDMAG*RAVEAH
Trigger: GTGCGCCTCAACGGCTCGGCAGCCAGCCATGTCCTG...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAAGGCCGCTGTCCTGGTaGAGGACATGGCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALRPLSW*RTWLAA
Trigger: GGCAGCCAGCCATGTCCTGCACCAGGACAGCGGCCT...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTTATACCGGGCTTCTCTaGGCTTCCGGGGCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCYTGLL*ASGAQS
Trigger: GCTCTGGGCCCCGGAAGCGCAGAGAAGCCCGGTATA...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369756.3
CDS-3UTR CCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATGCGGTGGTCCCGAACTaGCGGCTCTTGCTGCCACAC +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHAVVPN*RLLLPH
Trigger: GTGTGGCAGCAAGAGCCGCCAGTTCGGGACCACCGC...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTGCAGGGTAGCCAAGTaGAGTAGGTCTGTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GNKSQALIGSRELFFSLTCRVAK*SRSVAG
Trigger: GCCAGCAACAGACCTACTCCACTTGGCTACCCTGCA...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCTGGCTGCCGAGCCGTTaGGGCGCACGTCGCGGACGC +
Preference number: 4 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTWLPSR*GARRGR
Trigger: GCGTCCGCGACGTGCGCCTCAACGGCTCGGCAGCCA...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTACGTCCTTCACAGTCTaGAACTCCCCTTCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCTSFTV*NSPSPR
Trigger: GCGCGGGGAAGGGGAGTTTCAGACTGTGAAGGACGT...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCAACCCAGGGCTTAAGTaGGGGAGACTGAGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: GNKSQALIGSRELFFSLTNPGLK*GRLSQD
Trigger: ATCTTGGCTCAGTCTCCCTCACTTAAGCCCTGGGTT...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp CTGAAAGCATGTGACAGAAGCTTGCCCAGTCCCCTCAGACTTTGGACTCTTCTGCATTCTGAAAGCATGTaGCAGAAGCTTGCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LKACDRSLPSPLRLWTLLHSESM*QKLAQS
Trigger: GGACTGGGCAAGCTTCTGTCACATGCTTTCAGAATG...CAGAAGAGTCCAAAGTCTGAGGGGACTGGGCAAGCTTCTGTCACATGCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412306.1
CDS-3UTR GCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTTTCAGCACATTGCAGTaGGCCGTAGGGCTTTCGCAA +
Preference number: 4 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSFSTLQ*AVGLSQ
Trigger: TTGCGAAAGCCCTACGGCGCACTGCAATGTGCTGAA...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCTCCAGCCGCTGCACTTaGTCCCAGTTCAGCACATTG +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSSSRCT*SQFSTL
Trigger: CAATGTGCTGAACTGGGAGCAAGTGCAGCGGCTGGA...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAACGATCAGGCTCGGCTaGAGCTCGAGCGTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALTIRLG*SSSVGK
Trigger: CTTCCCCACGCTCGAGCTGCAGCCGAGCCTGATCGT...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTCAGTGCAGCGGCTGTTaGAGCTCTGACAGAATTCAC +
Preference number: 4 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSQCSGC*SSDRIH
Trigger: GTGAATTCTGTCAGAGCTGCAACAGCCGCTGCACTG...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCAAGCAGGCGGAGCTCTaGTTTCTGATAGGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: GNKSQALIGSRELFFSLTKQAEL*FLIGEC
Trigger: GCACTCACCTATCAGAAACCAGAGCTCCGCCTGCTT...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACGGTCGGCGCAGAAGATaGGGTCCAGGTCCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNGRRRR*GPGPCS
Trigger: GCTACAAGGACCTGGACCTCATCTTCTGCGCCGACC...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCCTCTCCTGTCTTGTCTaGAATGGCTTCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSLSCLV*NGFPTG
Trigger: TCCTGTGGGGAAGCCATTTCAGACAAGACAGGAGAG...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCACAGCCTGTTCTATATaGATAGGTGCCAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GNKSQALIGSRELFFSLTTACSI*IGARCW
Trigger: CCAGCACCTGGCACCTATTCATATAGAACAGGCTGT...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTGCCAGGCTGGACAGGTaGGAAGAGCCTCCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCARLDR*EEPPKD
Trigger: GTCTTTTGGAGGCTCTTCTCACCTGTCCAGCCTGGC...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAACTGGCGGCTCTTGCTaGCACACACGCTCGTGTCTC +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALTGGSC*HTRSCL
Trigger: GAGACACGAGCGTGTGTGGCAGCAAGAGCCGCCAGT...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTACGAACTGGCGGCTCTTaGTGCCACACACGCTCGTGT +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALRTGGS*CHTRSC
Trigger: ACACGAGCGTGTGTGGCAGCAAGAGCCGCCAGTTCG...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTAACACTTCCAGGAGCTaGGAGCGCGCTCAGACAGCA +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCNTSRS*ERAQTA
Trigger: TGCTGTCTGAGCGCGCTCGCAGCTCCTGGAAGTGTT...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320172.11
ENST00000369754.7
CDS-3UTR GCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATTGGTCTCGCTCAGGATaGCGTCCAGCCGCTGCACTT +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHWSRSG*RPAAAL
Trigger: AAGTGCAGCGGCTGGACGGCATCCTGAGCGAGACCA...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTATGGTCTCGCTCAGGATaGCGTCCAGCCGCTGCACTT +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALWSRSG*RPAAAL
Trigger: AAGTGCAGCGGCTGGACGGCATCCTGAGCGAGACCA...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCATGTGTTCTCTGACATaGCAGGCTGGACAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: GNKSQALIGSRELFFSLTMCSLT*QAGQVR
Trigger: TCTCACCTGTCCAGCCTGGCATGTCAGAGAACACAT...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCGAGCCTCCTCCGTTCTaGAAGGCTTTGCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASEPPPF*KALQQV
Trigger: GACTTGCTGCAAAGCCTTGCAGAACGGAGGAGGCTC...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTGCCCGTGAATCGGAATaGTCTCGCTCAGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCARESE*SRSGCR
Trigger: ACGGCATCCTGAGCGAGACCATTCCGATTCACGGGC...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGCCCAGGCCGCTGTCCTaGTGCAGGACATGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEPRPLS*CRTWLA
Trigger: AGCCAGCCATGTCCTGCACCAGGACAGCGGCCTGGG...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCCCCTCGGATTTCCTCTaGGTTCCTGGTGGCAATGAT +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSPSDFL*VPGGND
Trigger: ATCATTGCCACCAGGAACCCAGAGGAAATCCGAGGG...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTGCTACATAGGGGGCTaGCTGGTAATAGCAAGTGAC +
Preference number: 4 (lower is better)
Translates to: GNKSQALIGSRELFFSLTCYIGG*LVIASD
Trigger: GTCACTTGCTATTACCAGCCAGCCCCCTATGTAGCA...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTATAGGTGCCAGGTGCTaGCACTTCCAACTAAGCTAC +
Preference number: 4 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSIGARC*HFQLSY
Trigger: GTAGCTTAGTTGGAAGTGCCAGCACCTGGCACCTAT...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCACACGCTCGTGTCTCTaGAGCTTTAGCAGTTGTGCG +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSTRSCL*SFSSCA
Trigger: CGCACAACTGCTAAAGCTCCAGAGACACGAGCGTGT...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCAGCGCCACTTGGCCCTaGTCAGTCCAAAAGTATCTC +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSSATWP*SVQKYL
Trigger: GAGATACTTTTGGACTGACCAGGGCCAAGTGGCGCT...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369754.7
CDS-3UTR TCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTCCGATTATTGTGGGGTaGAATGTCTCAGTCATTGGG +
Preference number: 4 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSPIIVG*NVSVIG
Trigger: CCCAATGACTGAGACATTTCACCCCACAATAATCGG...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTCTCCATGAAGGGTCATaGGATACTCATACTTGCGGT +
Preference number: 4 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSLHEGS*DTHTCG
Trigger: ACCGCAAGTATGAGTATCTCATGACCCTTCATGGAG...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCCTCCATGAAGGGTCATaGGATACTCATACTTGCGGT +
Preference number: 4 (lower is better)
Translates to: GNKSQALIGSRELFFSLTLHEGS*DTHTCG
Trigger: ACCGCAAGTATGAGTATCTCATGACCCTTCATGGAG...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCAGTTCCTTAGAAAACTaGGTGGCAGTGCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASSSLEN*VAVQRL
Trigger: CAGCCGCTGCACTGCCACTCAGTTTTCTAAGGAACT...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCAACCCAGGGCTTAAGTaGGGGAGACTGAGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASNPGLK*GRLSQD
Trigger: ATCTTGGCTCAGTCTCCCTCACTTAAGCCCTGGGTT...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCCTGGTTTCTGATAGGTaGGTGCCAGGCTTAATCTGC +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSLVSDR*VPGLIC
Trigger: GCAGATTAAGCCTGGCACTCACCTATCAGAAACCAG...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAAACACTTCCAGGAGCTaGGAGCGCGCTCAGACAGCA +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALNTSRS*ERAQTA
Trigger: TGCTGTCTGAGCGCGCTCGCAGCTCCTGGAAGTGTT...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320172.11
ENST00000369754.7
CDS-3UTR GCA 90 bp AACTCTTGGAGAGAAAGTCTGCTTACTTCATATAAATCAGATGGGGTTTACACTCAGGACATGGCTGGCTaGCGAGCCGTTGAGGCGCAC +
Preference number: 4 (lower is better)
Translates to: NSWRESLLTSYKSDGVYTQDMAG*RAVEAH
Trigger: GTGCGCCTCAACGGCTCGGCAGCCAGCCATGTCCTG...AGTGTAAACCCCATCTGATTTATATGAAGTAAGCAGACTTTCTCTCCAAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412306.1
CDS-3UTR GCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTGACTCCAGTTTTCTCTaGTGCTCTCCAATGTCTGAG +
Preference number: 4 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSDSSFL*CSPMSE
Trigger: CTCAGACATTGGAGAGCAGCAGAGAAAACTGGAGTC...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTCCATCAGGCACACTGTaGTCTCATTTACCACTCCAT +
Preference number: 4 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSPSGTL*SHLPLH
Trigger: ATGGAGTGGTAAATGAGAGCACAGTGTGCCTGATGG...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp ATGTCCCATCAGGCACACTGTGCTCTCATTTACCACTCCATGAAGGGTCATGAGCCATCAGGCACACTGTaGTCTCATTTACCACTCCAT +
Preference number: 4 (lower is better)
Translates to: MSHQAHCALIYHSMKGHEPSGTL*SHLPLH
Trigger: ATGGAGTGGTAAATGAGAGCACAGTGTGCCTGATGG...CTCATGACCCTTCATGGAGTGGTAAATGAGAGCACAGTGTGCCTGATGGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423467.1
CDS-3UTR GCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCGCTAAAGTTGGCATCTaGTACATAGGGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASAKVGI*YIGGWL
Trigger: CAGCCAGCCCCCTATGTAGCAGATGCCAACTTTAGC...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCAAGCAGATCACCAGCTaGTCCTGTGTTCACAAGTGC +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSKQITS*SCVHKC
Trigger: GCACTTGTGAACACAGGAGCAGCTGGTGATCTGCTT...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCCAAGGTGCAGCTTGCTaGAACAGAACACCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSQGAAC*NRTPQS
Trigger: GCTTTGAGGTGTTCTGTTGCAGCAAGCTGCACCTTG...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCGGCCCTGGTCAGTCCTaGAGGCGGCCGCCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTGPGQS*RRPPLL
Trigger: TAGAAGGGGCGGCCGCCTCCAGGACTGACCAGGGCC...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320172.11
CDS-3UTR CCA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCCCGCCGAGCGCCACTTaGCCCTGGTCAGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTPPSAT*PWSVLE
Trigger: CTCCAGGACTGACCAGGGCCAAGTGGCGCTCGGCGG...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320172.11
CDS-3UTR CCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATGCCCGTGAATCGGAATaGTCTCGCTCAGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHARESE*SRSGCR
Trigger: ACGGCATCCTGAGCGAGACCATTCCGATTCACGGGC...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCCTGGCACGTGAATACTaGCTGAACCTGTGCAATGTA +
Preference number: 4 (lower is better)
Translates to: GNKSQALIGSRELFFSLTLAREY*LNLCNV
Trigger: TACATTGCACAGGTTCAGCCAGTATTCACGTGCCAG...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTCTGGCACGTGAATACTaGCTGAACCTGTGCAATGTA +
Preference number: 4 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSLAREY*LNLCNV
Trigger: TACATTGCACAGGTTCAGCCAGTATTCACGTGCCAG...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCATAGGTGCCAGGTGCTaGCACTTCCAACTAAGCTAC +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSIGARC*HFQLSY
Trigger: GTAGCTTAGTTGGAAGTGCCAGCACCTGGCACCTAT...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCACACGCTCGTGTCTCTaGAGCTTTAGCAGTTGTGCG +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASTRSCL*SFSSCA
Trigger: CGCACAACTGCTAAAGCTCCAGAGACACGAGCGTGT...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGCCGCCGAGCGCCACTTaGCCCTGGTCAGTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEPPSAT*PWSVQK
Trigger: CTTTTGGACTGACCAGGGCCAAGTGGCGCTCGGCGG...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369754.7
CDS-3UTR TCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGGGTCGGCGCAGAAGATaGGGTCCAGGTCCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEGRRRR*GPGPCS
Trigger: GCTACAAGGACCTGGACCTCATCTTCTGCGCCGACC...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCCTGCTCTCCAATGTCTaGGAAGTCGATGAAAAACCT +
Preference number: 4 (lower is better)
Translates to: GNKSQALIGSRELFFSLTLLSNV*EVDEKP
Trigger: AGGTTTTTCATCGACTTCTCAGACATTGGAGAGCAG...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TTCATGTCCCATCAGGCACACTGTGCTCTCATTTACCACTCCATGAAGGGTCATCTCCATGAAGGGTCATaGGATACTCATACTTGCGGT +
Preference number: 4 (lower is better)
Translates to: FMSHQAHCALIYHSMKGHLHEGS*DTHTCG
Trigger: ACCGCAAGTATGAGTATCTCATGACCCTTCATGGAG...ATGACCCTTCATGGAGTGGTAAATGAGAGCACAGTGTGCCTGATGGGACATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423467.1
CDS-3UTR TCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTTCTGTTGCTGGCACGTaGATACTGGCTGAACCTGTG +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCSVAGT*ILAEPV
Trigger: CACAGGTTCAGCCAGTATTCACGTGCCAGCAACAGA...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTAACCCAGGGCTTAAGTaGGGGAGACTGAGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCNPGLK*GRLSQD
Trigger: ATCTTGGCTCAGTCTCCCTCACTTAAGCCCTGGGTT...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATAGGCTATGTGTTCTCTaGCATGCCAGGCTGGACAGG +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHRLCVL*HARLDR
Trigger: CCTGTCCAGCCTGGCATGTCAGAGAACACATAGCCT...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAAGGCTATGTGTTCTCTaGCATGCCAGGCTGGACAGG +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALRLCVL*HARLDR
Trigger: CCTGTCCAGCCTGGCATGTCAGAGAACACATAGCCT...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTATCCAGCCGCTGCACTTaGTCCCAGTTCAGCACATTG +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALSSRCT*SQFSTL
Trigger: CAATGTGCTGAACTGGGAGCAAGTGCAGCGGCTGGA...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGTGGTCTCGCTCAGGATaGCGTCCAGCCGCTGCACTT +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEWSRSG*RPAAAL
Trigger: AAGTGCAGCGGCTGGACGGCATCCTGAGCGAGACCA...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCAGGCCGCTGTCCTGGTaGAGGACATGGCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTRPLSW*RTWLAA
Trigger: GGCAGCCAGCCATGTCCTGCACCAGGACAGCGGCCT...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp TCCCATCAGGCACACTGTGCTCTCATTTACCACTCCATGAAGGGTCATGAGATAGACTCCAGTTTTCTCTaGTGCTCTCCAATGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SHQAHCALIYHSMKGHEIDSSFL*CSPMSE
Trigger: CTCAGACATTGGAGAGCAGCAGAGAAAACTGGAGTC...TATCTCATGACCCTTCATGGAGTGGTAAATGAGAGCACAGTGTGCCTGATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423467.1
CDS-3UTR GCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCAATTCACAAGGAAGCTaGTACAGCAAACCCATCAGG +
Preference number: 4 (lower is better)
Translates to: GNKSQALIGSRELFFSLTNSQGS*YSKPIR
Trigger: CCTGATGGGTTTGCTGTAGCAGCTTCCTTGTGAATT...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTTCTATATGAATAGGTaGCAGGTGCTGGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: GNKSQALIGSRELFFSLTFYMNR*QVLALP
Trigger: TGGAAGTGCCAGCACCTGGCACCTATTCATATAGAA...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACGAGCCTCCTCCGTTCTaGAAGGCTTTGCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNEPPPF*KALQQV
Trigger: GACTTGCTGCAAAGCCTTGCAGAACGGAGGAGGCTC...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCAAGAGTGACCCAAGGTaGAGCTTGCTGCAACAGAAC +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASKSDPR*SLLQQN
Trigger: GTTCTGTTGCAGCAAGCTGCACCTTGGGTCACTCTT...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAGCTCGTCCTCAGACATaGCGAAGTACCCTTCACCCT +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALARPQT*RSTLHP
Trigger: AGGGTGAAGGGTACTTCGCCATGTCTGAGGACGAGC...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATGCTCGTCCTCAGACATaGCGAAGTACCCTTCACCCT +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHARPQT*RSTLHP
Trigger: AGGGTGAAGGGTACTTCGCCATGTCTGAGGACGAGC...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTATGCAGGGTAGCCAAGTaGAGTAGGTCTGTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALCRVAK*SRSVAG
Trigger: GCCAGCAACAGACCTACTCCACTTGGCTACCCTGCA...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACTGCAGGGTAGCCAAGTaGAGTAGGTCTGTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNCRVAK*SRSVAG
Trigger: GCCAGCAACAGACCTACTCCACTTGGCTACCCTGCA...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTAGCAGGTTATTGTTATaGCAGAGTCAGAGACCTCCA +
Preference number: 4 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSSRLLL*QSQRPP
Trigger: TGGAGGTCTCTGACTCTGCCATAACAATAACCTGCT...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTCTGACCTATACACATaGCTCTCTCTCACCAGACAT +
Preference number: 4 (lower is better)
Translates to: GNKSQALIGSRELFFSLTSDLYT*LSLTRH
Trigger: ATGTCTGGTGAGAGAGAGCCATGTGTATAGGTCAGA...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTTTGCCACTGTTGTTTaGCAGGGATATAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: GNKSQALIGSRELFFSLTFATVV*QGYKTP
Trigger: TGGAGTCTTATATCCCTGTCAAACAACAGTGGCAAA...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTTTTGCCACTGTTGTTTaGCAGGGATATAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSFATVV*QGYKTP
Trigger: TGGAGTCTTATATCCCTGTCAAACAACAGTGGCAAA...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCGGTTCCTGGTGGCAATaGTCTTGTTACAAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSGSWWQ*SCYKGD
Trigger: ATCACCTTTGTAACAAGATCATTGCCACCAGGAACC...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TTTCATGTCCCATCAGGCACACTGTGCTCTCATTTACCACTCCATGAAGGGTCACTGCTCTCCAATGTCTaGGAAGTCGATGAAAAACCT +
Preference number: 4 (lower is better)
Translates to: FHVPSGTLCSHLPLHEGSLLSNV*EVDEKP
Trigger: AGGTTTTTCATCGACTTCTCAGACATTGGAGAGCAG...TGACCCTTCATGGAGTGGTAAATGAGAGCACAGTGTGCCTGATGGGACATGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423467.1
CDS-3UTR TCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACTCTGTTGCTGGCACGTaGATACTGGCTGAACCTGTG +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNSVAGT*ILAEPV
Trigger: CACAGGTTCAGCCAGTATTCACGTGCCAGCAACAGA...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTACTCTCCTGTCTTGTCTaGAATGGCTTCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALLSCLV*NGFPTG
Trigger: TCCTGTGGGGAAGCCATTTCAGACAAGACAGGAGAG...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACCGGCTGTTGCAGCTCTaGCAGAATTCACAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNRLLQL*QNSQGS
Trigger: GCTTCCTTGTGAATTCTGTCAGAGCTGCAACAGCCG...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAAGTTCCTTAGAAAACTaGGTGGCAGTGCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALSSLEN*VAVQRL
Trigger: CAGCCGCTGCACTGCCACTCAGTTTTCTAAGGAACT...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTTGGTGTAGGAGTTCTTaGGGCAGCTGGATTTACTGC +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCWCRSS*GSWIYC
Trigger: GCAGTAAATCCAGCTGCCTCAAGAACTCCTACACCA...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCAATATTCCAAAAGAGTaGCCCAAGGTGCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSNIPKE*PKVQLA
Trigger: AGCAAGCTGCACCTTGGGTCACTCTTTTGGAATATT...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TGTGACAGAAGCTTGCCCAGTCCCCTCAGACTTTGGACTCTTCTGTTGTCTTTTGTTGTCTTTTGCCAATaGGGTGAAGTAACTCACTCC +
Preference number: 4 (lower is better)
Translates to: CDRSLPSPLRLWTLLLSFVVFCQ*GEVTHS
Trigger: GGAGTGAGTTACTTCACCTCATTGGCAAAAGACAAC...AAAAGACAACAGAAGAGTCCAAAGTCTGAGGGGACTGGGCAAGCTTCTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412306.1
CDS-3UTR TCA 90 bp TCCCATCAGGCACACTGTGCTCTCATTTACCACTCCATGAAGGGTCATGAGATATGTCTGAGAAGTCGATaGAAAACCTTGAGCGTGAGT +
Preference number: 4 (lower is better)
Translates to: SHQAHCALIYHSMKGHEICLRSR*KTLSVS
Trigger: ACTCACGCTCAAGGTTTTTCATCGACTTCTCAGACA...TATCTCATGACCCTTCATGGAGTGGTAAATGAGAGCACAGTGTGCCTGATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423467.1
CDS-3UTR GCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATTTCAGCACATTGCAGTaGGCCGTAGGGCTTTCGCAA +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHFSTLQ*AVGLSQ
Trigger: TTGCGAAAGCCCTACGGCGCACTGCAATGTGCTGAA...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCACACTGAATTCAAACTaGCTCCGGAGGGAATCCACA +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASTLNSN*LRREST
Trigger: TGTGGATTCCCTCCGGAGGCAGTTTGAATTCAGTGT...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACGCTAAAGTTGGCATCTaGTACATAGGGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNAKVGI*YIGGWL
Trigger: CAGCCAGCCCCCTATGTAGCAGATGCCAACTTTAGC...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCTCCACAGAAAGCACTTaGTACAAGCCTCAGACAGTA +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSSTEST*YKPQTV
Trigger: TACTGTCTGAGGCTTGTAGCAAGTGCTTTCTGTGGA...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACCAGTGCAGCGGCTGTTaGAGCTCTGACAGAATTCAC +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNQCSGC*SSDRIH
Trigger: GTGAATTCTGTCAGAGCTGCAACAGCCGCTGCACTG...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATCAGTGCAGCGGCTGTTaGAGCTCTGACAGAATTCAC +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHQCSGC*SSDRIH
Trigger: GTGAATTCTGTCAGAGCTGCAACAGCCGCTGCACTG...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTCCTGTGTTCACAAGTaGTCCCCTAGTTTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: GNKSQALIGSRELFFSLTSCVHK*SPSFLS
Trigger: TGAAAGAAAACTAGGGGAGCACTTGTGAACACAGGA...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTCAAGGTGCAGCTTGCTaGAACAGAACACCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCQGAAC*NRTPQS
Trigger: GCTTTGAGGTGTTCTGTTGCAGCAAGCTGCACCTTG...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTACCCTCGGATTTCCTCTaGGTTCCTGGTGGCAATGAT +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALPSDFL*VPGGND
Trigger: ATCATTGCCACCAGGAACCCAGAGGAAATCCGAGGG...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTTGCTACATAGGGGGCTaGCTGGTAATAGCAAGTGAC +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCCYIGG*LVIASD
Trigger: GTCACTTGCTATTACCAGCCAGCCCCCTATGTAGCA...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTAGTCATTGGGTTCTCTaGACATTCATAAAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSSHWVL*TFIKEQ
Trigger: CTGCTCTTTTATGAATGTTCAGAGAACCCAATGACT...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCGGTTCCTGGTGGCAATaGTCTTGTTACAAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASGSWWQ*SCYKGD
Trigger: ATCACCTTTGTAACAAGATCATTGCCACCAGGAACC...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTCTCCATGAAGGGTCATaGGATACTCATACTTGCGGT +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCLHEGS*DTHTCG
Trigger: ACCGCAAGTATGAGTATCTCATGACCCTTCATGGAG...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TTCATGTCCCATCAGGCACACTGTGCTCTCATTTACCACTCCATGAAGGGTCATTCATTTACCACTCCATaGAGGGTCATGAGATACTCA +
Preference number: 4 (lower is better)
Translates to: FMSHQAHCALIYHSMKGHSFTTP*RVMRYS
Trigger: TGAGTATCTCATGACCCTTCATGGAGTGGTAAATGA...ATGACCCTTCATGGAGTGGTAAATGAGAGCACAGTGTGCCTGATGGGACATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423467.1
CDS-3UTR TCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATCTGGTTTCTGATAGGTaGGTGCCAGGCTTAATCTGC +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHLVSDR*VPGLIC
Trigger: GCAGATTAAGCCTGGCACTCACCTATCAGAAACCAG...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCAATATTCCAAAAGAGTaGCCCAAGGTGCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASNIPKE*PKVQLA
Trigger: AGCAAGCTGCACCTTGGGTCACTCTTTTGGAATATT...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TGTGACAGAAGCTTGCCCAGTCCCCTCAGACTTTGGACTCTTCTGTTGTCTTTTAAATATGTGGTTGTGTaGCTTTCTTCCTTGAGCGTG +
Preference number: 4 (lower is better)
Translates to: CDRSLPSPLRLWTLLLSFKYVVV*LSSLSV
Trigger: CACGCTCAAGGAAGAAAGTCACACAACCACATATTT...AAAAGACAACAGAAGAGTCCAAAGTCTGAGGGGACTGGGCAAGCTTCTGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412306.1
CDS-3UTR GCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGTCCAGCCGCTGCACTTaGTCCCAGTTCAGCACATTG +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSESSRCT*SQFSTL
Trigger: CAATGTGCTGAACTGGGAGCAAGTGCAGCGGCTGGA...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCTCAGTTCCACATTTTTaGCACTGTTGTTTGACAGGG +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSSVPHF*HCCLTG
Trigger: CCCTGTCAAACAACAGTGGCAAAAATGTGGAACTGA...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCGATTGTTACGAGAACTaGACCAACCTACTACTGTTC +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSDCYEN*TNLLLF
Trigger: GAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATC...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTTTCATCATTGCAATATaGCCACGTCTCATGTTATCC +
Preference number: 4 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSFIIAI*PRLMLS
Trigger: GGATAACATGAGACGTGGGCATATTGCAATGATGAA...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCGGCTTCAAAGAAAGATaGACAAAAGGTAGTCCAGAC +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSGFKER*TKGSPD
Trigger: GTCTGGACTACCTTTTGTGCATCTTTCTTTGAAGCC...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACAAGCAGATCACCAGCTaGTCCTGTGTTCACAAGTGC +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNKQITS*SCVHKC
Trigger: GCACTTGTGAACACAGGAGCAGCTGGTGATCTGCTT...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAATGTGTTCTCTGACATaGCAGGCTGGACAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALMCSLT*QAGQVR
Trigger: TCTCACCTGTCCAGCCTGGCATGTCAGAGAACACAT...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACCAAGGTGCAGCTTGCTaGAACAGAACACCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNQGAAC*NRTPQS
Trigger: GCTTTGAGGTGTTCTGTTGCAGCAAGCTGCACCTTG...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATACCCAAGGTGCAGCTTaGTGCAACAGAACACCTCAA +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHTQGAA*CNRTPQ
Trigger: TTGAGGTGTTCTGTTGCAGCAAGCTGCACCTTGGGT...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAACCCAAGGTGCAGCTTaGTGCAACAGAACACCTCAA +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALTQGAA*CNRTPQ
Trigger: TTGAGGTGTTCTGTTGCAGCAAGCTGCACCTTGGGT...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACAAGAGTGACCCAAGGTaGAGCTTGCTGCAACAGAAC +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNKSDPR*SLLQQN
Trigger: GTTCTGTTGCAGCAAGCTGCACCTTGGGTCACTCTT...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATAAGAGTGACCCAAGGTaGAGCTTGCTGCAACAGAAC +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHKSDPR*SLLQQN
Trigger: GTTCTGTTGCAGCAAGCTGCACCTTGGGTCACTCTT...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGGCTCGTCCTCAGACATaGCGAAGTACCCTTCACCCT +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEARPQT*RSTLHP
Trigger: AGGGTGAAGGGTACTTCGCCATGTCTGAGGACGAGC...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACTGCTACATAGGGGGCTaGCTGGTAATAGCAAGTGAC +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNCYIGG*LVIASD
Trigger: GTCACTTGCTATTACCAGCCAGCCCCCTATGTAGCA...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATATAGGTGCCAGGTGCTaGCACTTCCAACTAAGCTAC +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHIGARC*HFQLSY
Trigger: GTAGCTTAGTTGGAAGTGCCAGCACCTGGCACCTAT...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACCCGATTATTGTGGGGTaGAATGTCTCAGTCATTGGG +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNPIIVG*NVSVIG
Trigger: CCCAATGACTGAGACATTTCACCCCACAATAATCGG...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTGGTTCCTGGTGGCAATaGTCTTGTTACAAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCGSWWQ*SCYKGD
Trigger: ATCACCTTTGTAACAAGATCATTGCCACCAGGAACC...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGTCTGTTGCTGGCACGTaGATACTGGCTGAACCTGTG +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSESVAGT*ILAEPV
Trigger: CACAGGTTCAGCCAGTATTCACGTGCCAGCAACAGA...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGCTCTCCTGTCTTGTCTaGAATGGCTTCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSELSCLV*NGFPTG
Trigger: TCCTGTGGGGAAGCCATTTCAGACAAGACAGGAGAG...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCCATCATAAGTTCTGCTaGTTGTTACGAGAACTGCAC +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASHHKFC*LLRELH
Trigger: GTGCAGTTCTCGTAACAATCAGCAGAACTTATGATG...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGCGGCTGTTGCAGCTCTaGCAGAATTCACAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSERLLQL*QNSQGS
Trigger: GCTTCCTTGTGAATTCTGTCAGAGCTGCAACAGCCG...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGAGTTCCTTAGAAAACTaGGTGGCAGTGCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSESSLEN*VAVQRL
Trigger: CAGCCGCTGCACTGCCACTCAGTTTTCTAAGGAACT...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTATTAAGTGAGGGAGACTaGGCCAAGATGGTAGTAGGA +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALLSEGD*AKMVVG
Trigger: TCCTACTACCATCTTGGCTCAGTCTCCCTCACTTAA...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCGCCAGGCTGGACAGGTaGGAAGAGCCTCCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTARLDR*EEPPKD
Trigger: GTCTTTTGGAGGCTCTTCTCACCTGTCCAGCCTGGC...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCCAAGTCTCGTTAACTTaGCATCTTCCAACTTTGTAC +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSQVSLT*HLPTLY
Trigger: GTACAAAGTTGGAAGATGTCAAGTTAACGAGACTTG...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTAATATTCCAAAAGAGTaGCCCAAGGTGCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCNIPKE*PKVQLA
Trigger: AGCAAGCTGCACCTTGGGTCACTCTTTTGGAATATT...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTGTCCAAAAGTATCTCTaGTGCATCTGGAAAGCGCAA +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCVQKYL*CIWKAQ
Trigger: TTGCGCTTTCCAGATGCATCAGAGATACTTTTGGAC...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369754.7
CDS-3UTR GCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCTCAGTTCCACATTTTTaGCACTGTTGTTTGACAGGG +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASSVPHF*HCCLTG
Trigger: CCCTGTCAAACAACAGTGGCAAAAATGTGGAACTGA...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAACACTGAATTCAAACTaGCTCCGGAGGGAATCCACA +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALTLNSN*LRREST
Trigger: TGTGGATTCCCTCCGGAGGCAGTTTGAATTCAGTGT...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAGACTCCAGTTTTCTCTaGTGCTCTCCAATGTCTGAG +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALDSSFL*CSPMSE
Trigger: CTCAGACATTGGAGAGCAGCAGAGAAAACTGGAGTC...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTACCATCAGGCACACTGTaGTCTCATTTACCACTCCAT +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALPSGTL*SHLPLH
Trigger: ATGGAGTGGTAAATGAGAGCACAGTGTGCCTGATGG...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGGCTAAAGTTGGCATCTaGTACATAGGGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEAKVGI*YIGGWL
Trigger: CAGCCAGCCCCCTATGTAGCAGATGCCAACTTTAGC...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCGGCTTCAAAGAAAGATaGACAAAAGGTAGTCCAGAC +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASGFKER*TKGSPD
Trigger: GTCTGGACTACCTTTTGTGCATCTTTCTTTGAAGCC...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCGCCCGTGAATCGGAATaGTCTCGCTCAGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTARESE*SRSGCR
Trigger: ACGGCATCCTGAGCGAGACCATTCCGATTCACGGGC...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACCTGGCACGTGAATACTaGCTGAACCTGTGCAATGTA +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNLAREY*LNLCNV
Trigger: TACATTGCACAGGTTCAGCCAGTATTCACGTGCCAG...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCTGTATCAGGAGAACCTaGTTGCTTCTAATGACAGGT +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASCIRRT*LLLMTG
Trigger: ACCTGTCATTAGAAGCAACCAGGTTCTCCTGATACA...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCCTACTACTGTTCATTTaGAGCAAGCCGTTTGTTAGC +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASLLLFI*SKPFVS
Trigger: GCTAACAAACGGCTTGCTCCAAATGAACAGTAGTAG...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCCATCCACTAAGGTTGTaGAGATTATGTGGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSHPLRL*RLCGCF
Trigger: GAAACAACCACATAATCTCCACAACCTTAGTGGATG...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTTCTGACCTATACACATaGCTCTCTCTCACCAGACAT +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCSDLYT*LSLTRH
Trigger: ATGTCTGGTGAGAGAGAGCCATGTGTATAGGTCAGA...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACCTGCTCTCCAATGTCTaGGAAGTCGATGAAAAACCT +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNLLSNV*EVDEKP
Trigger: AGGTTTTTCATCGACTTCTCAGACATTGGAGAGCAG...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTCATCATAAGTTCTGCTaGTTGTTACGAGAACTGCAC +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCHHKFC*LLRELH
Trigger: GTGCAGTTCTCGTAACAATCAGCAGAACTTATGATG...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCCCTATTACTGATCCATaGTCCACTAGATTAAACATC +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSPITDP*STRLNI
Trigger: GATGTTTAATCTAGTGGATCATGGATCAGTAATAGG...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGACAGCCTGTTCTATATaGATAGGTGCCAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSETACSI*IGARCW
Trigger: CCAGCACCTGGCACCTATTCATATAGAACAGGCTGT...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACAGCTGTTCTTTTCTCTaGCCTATACACATGGCTCTC +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNSCSFL*PIHMAL
Trigger: GAGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCT...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATAGCTGTTCTTTTCTCTaGCCTATACACATGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHSCSFL*PIHMAL
Trigger: GAGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCT...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGTGGTGTAGGAGTTCTTaGGGCAGCTGGATTTACTGC +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEWCRSS*GSWIYC
Trigger: GCAGTAAATCCAGCTGCCTCAAGAACTCCTACACCA...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACTCCACAGAAAGCACTTaGTACAAGCCTCAGACAGTA +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNSTEST*YKPQTV
Trigger: TACTGTCTGAGGCTTGTAGCAAGTGCTTTCTGTGGA...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTGGCTTCAAAGAAAGATaGACAAAAGGTAGTCCAGAC +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCGFKER*TKGSPD
Trigger: GTCTGGACTACCTTTTGTGCATCTTTCTTTGAAGCC...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAAATTCACAAGGAAGCTaGTACAGCAAACCCATCAGG +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALNSQGS*YSKPIR
Trigger: CCTGATGGGTTTGCTGTAGCAGCTTCCTTGTGAATT...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATAATTCACAAGGAAGCTaGTACAGCAAACCCATCAGG +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHNSQGS*YSKPIR
Trigger: CCTGATGGGTTTGCTGTAGCAGCTTCCTTGTGAATT...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCGAGCCTCCTCCGTTCTaGAAGGCTTTGCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTEPPPF*KALQQV
Trigger: GACTTGCTGCAAAGCCTTGCAGAACGGAGGAGGCTC...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATCTGTCTTGTCTGAAATaGCTTCCCCACAGGACATTT +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHLSCLK*LPHRTF
Trigger: AAATGTCCTGTGGGGAAGCCATTTCAGACAAGACAG...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTACTGTCTTGTCTGAAATaGCTTCCCCACAGGACATTT +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALLSCLK*LPHRTF
Trigger: AAATGTCCTGTGGGGAAGCCATTTCAGACAAGACAG...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTCTACTACTGTTCATTTaGAGCAAGCCGTTTGTTAGC +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCLLLFI*SKPFVS
Trigger: GCTAACAAACGGCTTGCTCCAAATGAACAGTAGTAG...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTATATTCTCCCATTTGTaGAATTTTATGGCTCACCAA +
Preference number: 4 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSIFSHL*NFMAHQ
Trigger: TTGGTGAGCCATAAAATTCCACAAATGGGAGAATAT...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACCCAGACGGATTAACCTaGATTAACCTAGCACTAAGC +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNPDGLT*INLALS
Trigger: GCTTAGTGCTAGGTTAATCCAGGTTAATCCGTCTGG...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAAGCAGGTTATTGTTATaGCAGAGTCAGAGACCTCCA +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALSRLLL*QSQRPP
Trigger: TGGAGGTCTCTGACTCTGCCATAACAATAACCTGCT...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACTCTGACCTATACACATaGCTCTCTCTCACCAGACAT +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNSDLYT*LSLTRH
Trigger: ATGTCTGGTGAGAGAGAGCCATGTGTATAGGTCAGA...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATTTTGCCACTGTTGTTTaGCAGGGATATAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHFATVV*QGYKTP
Trigger: TGGAGTCTTATATCCCTGTCAAACAACAGTGGCAAA...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCGAACACATATACCTTTaGAGGGTCTTGATTTCATCA +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASEHIYL*RVLISS
Trigger: TGATGAAATCAAGACCCTTCAAAGGTATATGTGTTC...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTTGTCTGAGAAGTCGATaGAAAACCTGGAACACATAT +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCCLRSR*KTWNTY
Trigger: ATATGTGTTCCAGGTTTTTCATCGACTTCTCAGACA...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATTCATTTACCACTCCATaGAGGGTCATGAGATACTCA +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHSFTTP*RVMRYS
Trigger: TGAGTATCTCATGACCCTTCATGGAGTGGTAAATGA...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACTCATTTACCACTCCATaGAGGGTCATGAGATACTCA +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNSFTTP*RVMRYS
Trigger: TGAGTATCTCATGACCCTTCATGGAGTGGTAAATGA...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTATCATTTACCACTCCATaGAGGGTCATGAGATACTCA +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALSFTTP*RVMRYS
Trigger: TGAGTATCTCATGACCCTTCATGGAGTGGTAAATGA...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACCTAGCACTAAGCATCTaGGGATCCCTAGATAAACAA +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNLALSI*GSLDKQ
Trigger: TTGTTTATCTAGGGATCCTCAGATGCTTAGTGCTAG...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTACTAGCACTAAGCATCTaGGGATCCCTAGATAAACAA +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALLALSI*GSLDKQ
Trigger: TTGTTTATCTAGGGATCCTCAGATGCTTAGTGCTAG...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCCGGCTGTTGCAGCTCTaGCAGAATTCACAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTRLLQL*QNSQGS
Trigger: GCTTCCTTGTGAATTCTGTCAGAGCTGCAACAGCCG...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTCAAGTCTCGTTAACTTaGCATCTTCCAACTTTGTAC +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCQVSLT*HLPTLY
Trigger: GTACAAAGTTGGAAGATGTCAAGTTAACGAGACTTG...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATTCAGTTCCACATTTTTaGCACTGTTGTTTGACAGGG +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHSVPHF*HCCLTG
Trigger: CCCTGTCAAACAACAGTGGCAAAAATGTGGAACTGA...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGCCATCAGGCACACTGTaGTCTCATTTACCACTCCAT +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEPSGTL*SHLPLH
Trigger: ATGGAGTGGTAAATGAGAGCACAGTGTGCCTGATGG...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCGGAGCATATCATCATTaGACAAAACACATCCCTAAT +
Preference number: 4 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASGAYHH*TKHIPN
Trigger: ATTAGGGATGTGTTTTGTGCAATGATGATATGCTCC...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAGATTGTTACGAGAACTaGACCAACCTACTACTGTTC +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALDCYEN*TNLLLF
Trigger: GAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATC...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATTCCTGTGTTCACAAGTaGTCCCCTAGTTTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHSCVHK*SPSFLS
Trigger: TGAAAGAAAACTAGGGGAGCACTTGTGAACACAGGA...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCTTGAAAACAACTTTATaGACAGTGAAGCAACCAACA +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSLKTTL*TVKQPT
Trigger: TGTTGGTTGCTTCACTGTGCATAAAGTTGTTTTCAA...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCCCCTCGGATTTCCTCTaGGTTCCTGGTGGCAATGAT +
Preference number: 4 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTPSDFL*VPGGND
Trigger: ATCATTGCCACCAGGAACCCAGAGGAAATCCGAGGG...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATTGTATCAGGAGAACCTaGTTGCTTCTAATGACAGGT +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHCIRRT*LLLMTG
Trigger: ACCTGTCATTAGAAGCAACCAGGTTCTCCTGATACA...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCTATCTGTTAAATCTTTaGTCCTTGAGCACACTTTCT +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSYLLNL*SLSTLS
Trigger: AGAAAGTGTGCTCAAGGACCAAAGATTTAACAGATA...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCATATTCTCCCATTTGTaGAATTTTATGGCTCACCAA +
Preference number: 4 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSIFSHL*NFMAHQ
Trigger: TTGGTGAGCCATAAAATTCCACAAATGGGAGAATAT...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR CAA 72 bp TGGCAAAGCTATGGGAGCAGATACAGCAAACCCATATaGTCATCACACATTTCTTCTCTTGTATCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: WQSYGSRYSKPI*SSHISSLVSGE
Trigger: TTCTCCTGATACAAGAGAAGAAATGTGTGATGACAATATGGGTTTGCTGTATCTGCTCCCATAGCTTTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR CAA 72 bp CGAGGAATTATCATAGCAAGCAGTCATCCACTAAGGTaGTGGAGATTATGTGGTTGTTTCACAACACAAAGG +
Preference number: 4 (lower is better)
Translates to: RGIIIASSHPLR*WRLCGCFTTQR
Trigger: CCTTTGTGTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATGATAATTCCTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAAGTCATTGGGTTCTCTaGACATTCATAAAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALSHWVL*TFIKEQ
Trigger: CTGCTCTTTTATGAATGTTCAGAGAACCCAATGACT...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATTGTCTGAGAAGTCGATaGAAAACCTGGAACACATAT +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHCLRSR*KTWNTY
Trigger: ATATGTGTTCCAGGTTTTTCATCGACTTCTCAGACA...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTATGTCTGAGAAGTCGATaGAAAACCTGGAACACATAT +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALCLRSR*KTWNTY
Trigger: ATATGTGTTCCAGGTTTTTCATCGACTTCTCAGACA...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCCTGGTTTCTGATAGGTaGGTGCCAGGCTTAATCTGC +
Preference number: 4 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTLVSDR*VPGLIC
Trigger: GCAGATTAAGCCTGGCACTCACCTATCAGAAACCAG...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGAGCTGTTCTTTTCTCTaGCCTATACACATGGCTCTC +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSESCSFL*PIHMAL
Trigger: GAGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCT...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATCAAGTCTCGTTAACTTaGCATCTTCCAACTTTGTAC +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHQVSLT*HLPTLY
Trigger: GTACAAAGTTGGAAGATGTCAAGTTAACGAGACTTG...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGTCCACAGAAAGCACTTaGTACAAGCCTCAGACAGTA +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSESTEST*YKPQTV
Trigger: TACTGTCTGAGGCTTGTAGCAAGTGCTTTCTGTGGA...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACTTAGGAATGACATTTTaGTCAGCTAACACCCGGATA +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNLGMTF*SANTRI
Trigger: TATCCGGGTGTTAGCTGACCAAAATGTCATTCCTAA...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATTTAGGAATGACATTTTaGTCAGCTAACACCCGGATA +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHLGMTF*SANTRI
Trigger: TATCCGGGTGTTAGCTGACCAAAATGTCATTCCTAA...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATCATCCACTAAGGTTGTaGAGATTATGTGGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHHPLRL*RLCGCF
Trigger: GAAACAACCACATAATCTCCACAACCTTAGTGGATG...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTACATCCACTAAGGTTGTaGAGATTATGTGGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALHPLRL*RLCGCF
Trigger: GAAACAACCACATAATCTCCACAACCTTAGTGGATG...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCCCGATTATTGTGGGGTaGAATGTCTCAGTCATTGGG +
Preference number: 4 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTPIIVG*NVSVIG
Trigger: CCCAATGACTGAGACATTTCACCCCACAATAATCGG...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAGAACACATATACCTTTaGAGGGTCTTGATTTCATCA +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALEHIYL*RVLISS
Trigger: TGATGAAATCAAGACCCTTCAAAGGTATATGTGTTC...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGTCTGAACTCCTAAACTaGTTCACAAGTTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSESELLN*FTSWSE
Trigger: CTCACTCCAACTTGTGAATCAGTTTAGGAGTTCAGA...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATCCTATTACTGATCCATaGTCCACTAGATTAAACATC +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHPITDP*STRLNI
Trigger: GATGTTTAATCTAGTGGATCATGGATCAGTAATAGG...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp AACTCTTGGAGAGAAAGTCTGCTTACTTCATATAAATCAGATGGGGTTTACACTCTTTTGCCAATGAGGTaGAGTAACTCACTCCATGGA +
Preference number: 4 (lower is better)
Translates to: NSWRESLLTSYKSDGVYTLLPMR*SNSLHG
Trigger: TCCATGGAGTGAGTTACTTCACCTCATTGGCAAAAG...AGTGTAAACCCCATCTGATTTATATGAAGTAAGCAGACTTTCTCTCCAAGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412306.1
CDS-3UTR GCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAGGAGCATATCATCATTaGACAAAACACATCCCTAAT +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALGAYHH*TKHIPN
Trigger: ATTAGGGATGTGTTTTGTGCAATGATGATATGCTCC...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATGGAGCATATCATCATTaGACAAAACACATCCCTAAT +
Preference number: 4 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHGAYHH*TKHIPN
Trigger: ATTAGGGATGTGTTTTGTGCAATGATGATATGCTCC...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTTTGAAAACAACTTTATaGACAGTGAAGCAACCAACA +
Preference number: 4 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCLKTTL*TVKQPT
Trigger: TGTTGGTTGCTTCACTGTGCATAAAGTTGTTTTCAA...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
3UTR CAA 72 bp AAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTaGTTTCACAACACAAAGGGAAGGTTCTTATGTGTT +
Preference number: 4 (lower is better)
Translates to: KQSSTKVVEIMW*FHNTKGRFLCV
Trigger: AACACATAAGAACCTTCCCTTTGTGTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR TCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGAGTCATTGGGTTCTCTaGACATTCATAAAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSESHWVL*TFIKEQ
Trigger: CTGCTCTTTTATGAATGTTCAGAGAACCCAATGACT...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGTTCATCATTGCAATATaGCCACGTCTCATGTTATCC +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEFIIAI*PRLMLS
Trigger: GGATAACATGAGACGTGGGCATATTGCAATGATGAA...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR GCA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTATTGAAAACAACTTTATaGACAGTGAAGCAACCAACA +
Preference number: 4 (lower is better)
Translates to: ERCTKGSPDGLTWINLALLKTTL*TVKQPT
Trigger: TGTTGGTTGCTTCACTGTGCATAAAGTTGTTTTCAA...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGTTAGGAATGACATTTTaGTCAGCTAACACCCGGATA +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSELGMTF*SANTRI
Trigger: TATCCGGGTGTTAGCTGACCAAAATGTCATTCCTAA...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACATATTCTCCCATTTGTaGAATTTTATGGCTCACCAA +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNIFSHL*NFMAHQ
Trigger: TTGGTGAGCCATAAAATTCCACAAATGGGAGAATAT...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACTTTCCTTCCTTGGTTTaGATTACACATATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNFPSLV*ITHILP
Trigger: TGGAAGAATATGTGTAATCCAAACCAAGGAAGGAAA...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp AACTCTTGGAGAGAAAGTCTGCTTACTTCATATAAATCAGATGGGGTTTACACTAGTCCCCTCAGACTTTaGACTCTTCTGTTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: NSWRESLLTSYKSDGVYTSPLRL*TLLLSF
Trigger: AAAAGACAACAGAAGAGTCCAAAGTCTGAGGGGACT...AGTGTAAACCCCATCTGATTTATATGAAGTAAGCAGACTTTCTCTCCAAGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412306.1
CDS-3UTR CCA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCCTACTACTGTTCATTTaGAGCAAGCCGTTTGTTAGC +
Preference number: 4 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTLLLFI*SKPFVS
Trigger: GCTAACAAACGGCTTGCTCCAAATGAACAGTAGTAG...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp ACTCTTGGAGAGAAAGTCTGCTTACTTCATATAAATCAGATGGGGTTTACACTGCCAAAATCTCTCATGTaGAGATTTGGCTACTTTTCA +
Preference number: 4 (lower is better)
Translates to: TLGEKVCLLHINQMGFTLPKSLM*RFGYFS
Trigger: TGAAAAGTAGCCAAATCTCCACATGAGAGATTTTGG...CAGTGTAAACCCCATCTGATTTATATGAAGTAAGCAGACTTTCTCTCCAAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412306.1
CDS-3UTR CCA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGTTTCCTTCCTTGGTTTaGATTACACATATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEFPSLV*ITHILP
Trigger: TGGAAGAATATGTGTAATCCAAACCAAGGAAGGAAA...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCTATCTGTTAAATCTTTaGTCCTTGAGCACACTTTCT +
Preference number: 4 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTYLLNL*SLSTLS
Trigger: AGAAAGTGTGCTCAAGGACCAAAGATTTAACAGATA...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CCA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCTTTCCTTCCTTGGTTTaGATTACACATATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTFPSLV*ITHILP
Trigger: TGGAAGAATATGTGTAATCCAAACCAAGGAAGGAAA...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS GCA 90 bp CGAAGTCGCCGCCGCCGAAGTCGCCGCCTAGGGGGATGTAGGGGCTaGAGGCCAGCTCGTCCTCAGACATGGCGAAGTACCCTTCACCCT +
Preference number: 5 (lower is better)
Translates to: RSRRRRSRRLGGCRG*RPARPQTWRSTLHP
Trigger: AGGGTGAAGGGTACTTCGCCATGTCTGAGGACGAGCTGGCCTGCAGCCCCTACATCCCCCTAGGCGGCGACTTCGGCGGCGGCGACTTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS GCA 90 bp CCGCTGCCACCCCAGCTGCGGTGGTCCCGAACTGGCGGCTCTTGCTaGCACACACGCTCGTGTCTCTGGAGCTTTAGCAGTTGTGCGGGG +
Preference number: 5 (lower is better)
Translates to: PLPPQLRWSRTGGSC*HTRSCLWSFSSCAG
Trigger: CCCCGCACAACTGCTAAAGCTCCAGAGACACGAGCGTGTGTGGCAGCAAGAGCCGCCAGTTCGGGACCACCGCAGCTGGGGTGGCAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369754.7
ENST00000369756.3
CDS GCA 90 bp GCGCCGCTGCCACCCCAGCTGCGGTGGTCCCGAACTGGCGGCTCTTaGTGCCACACACGCTCGTGTCTCTGGAGCTTTAGCAGTTGTGCG +
Preference number: 5 (lower is better)
Translates to: APLPPQLRWSRTGGS*CHTRSCLWSFSSCA
Trigger: CGCACAACTGCTAAAGCTCCAGAGACACGAGCGTGTGTGGCAGCAAGAGCCGCCAGTTCGGGACCACCGCAGCTGGGGTGGCAGCGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369754.7
ENST00000369756.3
CDS CCA 90 bp CGCCTAGGGGGATGTAGGGGCTGCAGGCCAGCTCGTCCTCAGACATaGCGAAGTACCCTTCACCCTCCGCCATGTAGTGCCCGCCGAGCG +
Preference number: 5 (lower is better)
Translates to: RLGGCRGCRPARPQT*RSTLHPPPCSARRA
Trigger: CGCTCGGCGGGCACTACATGGCGGAGGGTGAAGGGTACTTCGCCATGTCTGAGGACGAGCTGGCCTGCAGCCCCTACATCCCCCTAGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS CCA 90 bp CTGATGCATCTGGAAAGCGCAAGCGAGAGTCCCGTCTGTGTCACCTaGAGGCGGCCGCCCCTTCTAGGAGCGCAGCGAGCGAGAGCGAAA +
Preference number: 5 (lower is better)
Translates to: LMHLESASESPVCVT*RRPPLLGAQRARAK
Trigger: TTTCGCTCTCGCTCGCTGCGCTCCTAGAAGGGGCGGCCGCCTCCAGGTGACACAGACGGGACTCTCGCTTGCGCTTTCCAGATGCATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369754.7
CDS TCA 90 bp GGTAAGAAGTCCAACAGGCAGTCCAGCACGACGTCCTTCACAGTCTaGAACTCCCCTTCCCCGCGCAGGTCGGCGCAGAAGATGAGGTCC +
Preference number: 5 (lower is better)
Translates to: GKKSNRQSSTTSFTV*NSPSPRRSAQKMRS
Trigger: GGACCTCATCTTCTGCGCCGACCTGCGCGGGGAAGGGGAGTTTCAGACTGTGAAGGACGTCGTGCTGGACTGCCTGTTGGACTTCTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
ENST00000412306.1
ENST00000423467.1
CDS GCA 90 bp CAGCGAGCGAGAGCGAAACCGAGAGGCGGCAACACTTCCAGGAGCTaGGAGCGCGCTCAGACAGCAAATAGCGACTTCGTCTTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: QRARAKPRGGNTSRS*ERAQTANSDFVFPR
Trigger: TCTGGGAAAGACGAAGTCGCTATTTGCTGTCTGAGCGCGCTCGCAGCTCCTGGAAGTGTTGCCGCCTCTCGGTTTCGCTCTCGCTCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320172.11
ENST00000369754.7
CDS-3UTR CAA 90 bp TGTGACAGAAGCTTGCCCAGTCCCCTCAGACTTTGGACTCTTCTGTTGTCTTTTCTGGCTGCCGAGCCGTaGAGGCGCACGTCGCGGACG +
Preference number: 5 (lower is better)
Translates to: CDRSLPSPLRLWTLLLSFLAAEP*RRTSRT
Trigger: CGTCCGCGACGTGCGCCTCAACGGCTCGGCAGCCAG...AAAAGACAACAGAAGAGTCCAAAGTCTGAGGGGACTGGGCAAGCTTCTGTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412306.1
CDS-3UTR CAA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCCCCGCCGAGCGCCACTaGGCCCTGGTCAGTCCACTC +
Preference number: 5 (lower is better)
Translates to: GNKSQALIGSRELFFSLTPAERH*ALVSPL
Trigger: GAGTGGACTGACCAGGGCCAAGTGGCGCTCGGCGGG...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369756.3
CDS-3UTR CAA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTCCGAACTGGCGGCTCTaGCTGCCACACACGCTCGTG +
Preference number: 5 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSPNWRL*LPHTLV
Trigger: CACGAGCGTGTGTGGCAGCAAGAGCCGCCAGTTCGG...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTACTGGCTGCCGAGCCGTaGAGGCGCACGTCGCGGACG +
Preference number: 5 (lower is better)
Translates to: ERCTKGSPDGLTWINLALLAAEP*RRTSRT
Trigger: CGTCCGCGACGTGCGCCTCAACGGCTCGGCAGCCAG...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACCTGGCTGCCGAGCCGTaGAGGCGCACGTCGCGGACG +
Preference number: 5 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNLAAEP*RRTSRT
Trigger: CGTCCGCGACGTGCGCCTCAACGGCTCGGCAGCCAG...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATCCCGCCGAGCGCCACTaGGCCCTGGTCAGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHPAERH*ALVSPG
Trigger: TCCAGGACTGACCAGGGCCAAGTGGCGCTCGGCGGG...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320172.11
CDS CCA 90 bp TGGTCCCGAACTGGCGGCTCTTGCTGCCACACACGCTCGTGTCTCTaGAGCTTTAGCAGTTGTGCGGGGAAAATGTCTTCAGTACTTTTT +
Preference number: 5 (lower is better)
Translates to: WSRTGGSCCHTRSCL*SFSSCAGKMSSVLF
Trigger: AAAAAGTACTGAAGACATTTTCCCCGCACAACTGCTAAAGCTCCAGAGACACGAGCGTGTGTGGCAGCAAGAGCCGCCAGTTCGGGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTTCCCAGTTCAGCACATaGCAGTGCGCCGTAGGGCTT +
Preference number: 5 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSSQFST*QCAVGL
Trigger: AAGCCCTACGGCGCACTGCAATGTGCTGAACTGGGA...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTGTCCAGCCGCTGCACTaGCTCCCAGTTCAGCACATT +
Preference number: 5 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSVQPLH*LPVQHI
Trigger: AATGTGCTGAACTGGGAGCAAGTGCAGCGGCTGGAC...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATCCGAACTGGCGGCTCTaGCTGCCACACACGCTCGTG +
Preference number: 5 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHPNWRL*LPHTLV
Trigger: CACGAGCGTGTGTGGCAGCAAGAGCCGCCAGTTCGG...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTACCGAACTGGCGGCTCTaGCTGCCACACACGCTCGTG +
Preference number: 5 (lower is better)
Translates to: ERCTKGSPDGLTWINLALPNWRL*LPHTLV
Trigger: CACGAGCGTGTGTGGCAGCAAGAGCCGCCAGTTCGG...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCGTCCAGCCGCTGCACTaGCTCCCAGTTCAGCACATT +
Preference number: 5 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSVQPLH*LPVQHI
Trigger: AATGTGCTGAACTGGGAGCAAGTGCAGCGGCTGGAC...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS CCA 90 bp CAAGAGGTTGCAGTACTTAAGCAGGCCTCCCCCTCGGATTTCCTCTaGGTTCCTGGTGGCAATGATCTTGTTACAAAGGTGATCAAAGGC +
Preference number: 5 (lower is better)
Translates to: QEVAVLKQASPSDFL*VPGGNDLVTKVIKG
Trigger: GCCTTTGATCACCTTTGTAACAAGATCATTGCCACCAGGAACCCAGAGGAAATCCGAGGGGGAGGCCTGCTTAAGTACTGCAACCTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTGGTGTGATCTTCTCTTaGTTCACCCCCTCGGGTAAG +
Preference number: 5 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSGVIFS*FTPSGK
Trigger: CTTACCCGAGGGGGTGAACAAAGAGAAGATCACACC...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTATGATTGTAGAGAGGTaGGAGGGAGAGACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSMIVER*EGETAS
Trigger: GCTGGCTGTCTCTCCCTCCAACCTCTCTACAATCAT...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCGACCCAAGGTGCAGCTaGCTGCAACAGAACACCTCA +
Preference number: 5 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSDPRCS*LQQNTS
Trigger: TGAGGTGTTCTGTTGCAGCAAGCTGCACCTTGGGTC...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TGTGACAGAAGCTTGCCCAGTCCCCTCAGACTTTGGACTCTTCTGTTGTCTTTTGGTGTGATCTTCTCTTaGTTCACCCCCTCGGGTAAG +
Preference number: 5 (lower is better)
Translates to: CDRSLPSPLRLWTLLLSFGVIFS*FTPSGK
Trigger: CTTACCCGAGGGGGTGAACAAAGAGAAGATCACACC...AAAAGACAACAGAAGAGTCCAAAGTCTGAGGGGACTGGGCAAGCTTCTGTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412306.1
CDS-3UTR CAA 90 bp TTCATGTCCCATCAGGCACACTGTGCTCTCATTTACCACTCCATGAAGGGTCATGGTGTGATCTTCTCTTaGTTCACCCCCTCGGGTAAG +
Preference number: 5 (lower is better)
Translates to: FMSHQAHCALIYHSMKGHGVIFS*FTPSGK
Trigger: CTTACCCGAGGGGGTGAACAAAGAGAAGATCACACC...ATGACCCTTCATGGAGTGGTAAATGAGAGCACAGTGTGCCTGATGGGACATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423467.1
CDS-3UTR CAA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCCGCTCTCCCCGATTATaGTGGGGTGAAATGTCTCAG +
Preference number: 5 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSRSPRL*WGEMSQ
Trigger: CTGAGACATTTCACCCCACAATAATCGGGGAGAGCG...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGCCCGCCGAGCGCCACTaGGCCCTGGTCAGTCCAAAA +
Preference number: 5 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEPAERH*ALVSPK
Trigger: TTTTGGACTGACCAGGGCCAAGTGGCGCTCGGCGGG...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369754.7
CDS GCA 90 bp AGTGGAGTAGGTCTGTTGCTGGCACGTGAATACTGGCTGAACCTGTaGAATGTAGTAATTGCTAAAGTTGGCATCTGCTACATAGGGGGC +
Preference number: 5 (lower is better)
Translates to: SGVGLLLAREYWLNL*NVVIAKVGICYIGG
Trigger: GCCCCCTATGTAGCAGATGCCAACTTTAGCAATTACTACATTGCACAGGTTCAGCCAGTATTCACGTGCCAGCAACAGACCTACTCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATGTCCAGCCGCTGCACTaGCTCCCAGTTCAGCACATT +
Preference number: 5 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHVQPLH*LPVQHI
Trigger: AATGTGCTGAACTGGGAGCAAGTGCAGCGGCTGGAC...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTCCCCTCACCAAGAGGTaGCAGTACTTAAGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCPLTKR*QYLSRP
Trigger: AGGCCTGCTTAAGTACTGCAACCTCTTGGTGAGGGG...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS TCA 90 bp CCATCAGGCACACTGTGCTCTCATTTACCACTCCATGAAGGGTCATaGGATACTCATACTTGCGGTCTTCCAATCCCACAAAGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: PSGTLCSHLPLHEGS*DTHTCGLPIPQSGS
Trigger: AGAACCACTTTGTGGGATTGGAAGACCGCAAGTATGAGTATCTCATGACCCTTCATGGAGTGGTAAATGAGAGCACAGTGTGCCTGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
ENST00000423467.1
CDS TCA 90 bp CTTTCATGTCCCATCAGGCACACTGTGCTCTCATTTACCACTCCATaGAGGGTCATGAGATACTCATACTTGCGGTCTTCCAATCCCACA +
Preference number: 5 (lower is better)
Translates to: LSCPIRHTVLSFTTP*RVMRYSYLRSSNPT
Trigger: TGTGGGATTGGAAGACCGCAAGTATGAGTATCTCATGACCCTTCATGGAGTGGTAAATGAGAGCACAGTGTGCCTGATGGGACATGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
ENST00000423467.1
CDS-3UTR CAA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTCGCTCTCCCCGATTATaGTGGGGTGAAATGTCTCAG +
Preference number: 5 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCRSPRL*WGEMSQ
Trigger: CTGAGACATTTCACCCCACAATAATCGGGGAGAGCG...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACCCCCTCACCAAGAGGTaGCAGTACTTAAGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNPLTKR*QYLSRP
Trigger: AGGCCTGCTTAAGTACTGCAACCTCTTGGTGAGGGG...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp ATGTCCCATCAGGCACACTGTGCTCTCATTTACCACTCCATGAAGGGTCATGAGATGAGATACTCATACTaGCGGTCTTCCAATCCCACA +
Preference number: 5 (lower is better)
Translates to: MSHQAHCALIYHSMKGHEMRYSY*RSSNPT
Trigger: TGTGGGATTGGAAGACCGCAAGTATGAGTATCTCAT...CTCATGACCCTTCATGGAGTGGTAAATGAGAGCACAGTGTGCCTGATGGGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423467.1
CDS-3UTR CAA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTAGTGGAGTAGGTCTGTaGCTGGCACGTGAATACTGG +
Preference number: 5 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCSGVGL*LAREYW
Trigger: CCAGTATTCACGTGCCAGCAACAGACCTACTCCACT...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCATCAGGAGAACCTGGTaGCTTCTAATGACAGGTCTC +
Preference number: 5 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSIRRTW*LLMTGL
Trigger: GAGACCTGTCATTAGAAGCAACCAGGTTCTCCTGAT...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTATGATTGTAGAGAGGTaGGAGGGAGAGACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCMIVER*EGETAS
Trigger: GCTGGCTGTCTCTCCCTCCAACCTCTCTACAATCAT...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS GCA 90 bp TACTGGCTGAACCTGTGCAATGTAGTAATTGCTAAAGTTGGCATCTaGTACATAGGGGGCTGGCTGGTAATAGCAAGTGACATTAGCCAC +
Preference number: 5 (lower is better)
Translates to: YWLNLCNVVIAKVGI*YIGGWLVIASDISH
Trigger: GTGGCTAATGTCACTTGCTATTACCAGCCAGCCCCCTATGTAGCAGATGCCAACTTTAGCAATTACTACATTGCACAGGTTCAGCCAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCATGAGATACTCATACTaGCGGTCTTCCAATCCCACA +
Preference number: 5 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSMRYSY*RSSNPT
Trigger: TGTGGGATTGGAAGACCGCAAGTATGAGTATCTCAT...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTAGTCATCCACTAAGGTaGTGGAGATTATGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSSHPLR*WRLCGC
Trigger: ACAACCACATAATCTCCACAACCTTAGTGGATGACT...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCCCTTTAAAAACGGCATaGTCACAGGCTATGTGTTCT +
Preference number: 5 (lower is better)
Translates to: GNKSQALIGSRELFFSLTPLKTA*SQAMCS
Trigger: AGAACACATAGCCTGTGACAATGCCGTTTTTAAAGG...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACATGATTGTAGAGAGGTaGGAGGGAGAGACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNMIVER*EGETAS
Trigger: GCTGGCTGTCTCTCCCTCCAACCTCTCTACAATCAT...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCCATCGGTCAGAGTCATaGCACACTTTAACCATTTTC +
Preference number: 5 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSHRSES*HTLTIF
Trigger: GAAAATGGTTAAAGTGTGCAATGACTCTGACCGATG...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTGGAACACATATACCTTaGAAGGGTCTTGATTTCATC +
Preference number: 5 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSGTHIP*KGLDFI
Trigger: GATGAAATCAAGACCCTTCAAAGGTATATGTGTTCC...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTGGATTTAATTCATCATaGCAATATGCCCACGTCTCA +
Preference number: 5 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSGFNSS*QYAHVS
Trigger: TGAGACGTGGGCATATTGCAATGATGAATTAAATCC...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTTTCTTTCAGAAAACTTaGAAACAACTAAGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSFFQKT*KQLSRR
Trigger: CCGCCTGCTTAGTTGTTTCAAAGTTTTCTGAAAGAA...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTTCTTTCAGAAAACTTaGAAACAACTAAGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: GNKSQALIGSRELFFSLTFFQKT*KQLSRR
Trigger: CCGCCTGCTTAGTTGTTTCAAAGTTTTCTGAAAGAA...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCAAAGTGAGCAGATACTaGATCCCATTTCTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSKVSRY*IPFLER
Trigger: CCTTTCCAGAAATGGGATCAAGTATCTGCTCACTTT...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGGACCCAAGGTGCAGCTaGCTGCAACAGAACACCTCA +
Preference number: 5 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEDPRCS*LQQNTS
Trigger: TGAGGTGTTCTGTTGCAGCAAGCTGCACCTTGGGTC...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGGGTGTGATCTTCTCTTaGTTCACCCCCTCGGGTAAG +
Preference number: 5 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEGVIFS*FTPSGK
Trigger: CTTACCCGAGGGGGTGAACAAAGAGAAGATCACACC...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTATACACATGGCTCTACATTTTTGCCACTGTaGTTTGACAGGGATATAAGA +
Preference number: 5 (lower is better)
Translates to: ALIGSRELFFSLTYTHGSTFLPL*FDRDIR
Trigger: TCTTATATCCCTGTCAAACAACAGTGGCAAAAATGT...AGAGCCATGTGTATAGGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CCTGTGACGCAGCCTATAGTCAAAATATTCCAAAAGAGTGACCCAAGGTGCAGCGAAATGTCTCAGTCATaGGGTTCTCTGAACATTCAT +
Preference number: 5 (lower is better)
Translates to: PVTQPIVKIFQKSDPRCSEMSQS*GSLNIH
Trigger: ATGAATGTTCAGAGAACCCAATGACTGAGACATTTC...GCTGCACCTTGGGTCACTCTTTTGGAATATTTTGACTATAGGCTGCGTCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGCGCTCTCCCCGATTATaGTGGGGTGAAATGTCTCAG +
Preference number: 5 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSERSPRL*WGEMSQ
Trigger: CTGAGACATTTCACCCCACAATAATCGGGGAGAGCG...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATACAGTAATCCCAACGTaGGAGTTCCCCTTTTTCCTG +
Preference number: 5 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHTVIPT*EFPFFL
Trigger: CAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGT...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GGAAACAAATCACAGGCGCTAATAGGGAGTCGGGAGCTGTTCTTTTCTCTGACCTTATCTGTTAAATCTTaGGTCCTTGAGCACACTTTC +
Preference number: 5 (lower is better)
Translates to: GNKSQALIGSRELFFSLTLSVKS*VLEHTF
Trigger: GAAAGTGTGCTCAAGGACCAAAGATTTAACAGATAA...GGTCAGAGAAAAGAACAGCTCCCGACTCCCTATTAGCGCCTGTGATTTGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCGTGGAGATTATGTGGTaGTTTCACAACACAAAGGGA +
Preference number: 5 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASVEIMW*FHNTKG
Trigger: TCCCTTTGTGTTGTGAAACAACCACATAATCTCCAC...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCAGTCATCCACTAAGGTaGTGGAGATTATGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASSHPLR*WRLCGC
Trigger: ACAACCACATAATCTCCACAACCTTAGTGGATGACT...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTCATCGGTCAGAGTCATaGCACACTTTAACCATTTTC +
Preference number: 5 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCHRSES*HTLTIF
Trigger: GAAAATGGTTAAAGTGTGCAATGACTCTGACCGATG...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCCCCCTCACCAAGAGGTaGCAGTACTTAAGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTPLTKR*QYLSRP
Trigger: AGGCCTGCTTAAGTACTGCAACCTCTTGGTGAGGGG...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATATGAGATACTCATACTaGCGGTCTTCCAATCCCACA +
Preference number: 5 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHMRYSY*RSSNPT
Trigger: TGTGGGATTGGAAGACCGCAAGTATGAGTATCTCAT...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACATGAGATACTCATACTaGCGGTCTTCCAATCCCACA +
Preference number: 5 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNMRYSY*RSSNPT
Trigger: TGTGGGATTGGAAGACCGCAAGTATGAGTATCTCAT...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCGGATTTAATTCATCATaGCAATATGCCCACGTCTCA +
Preference number: 5 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASGFNSS*QYAHVS
Trigger: TGAGACGTGGGCATATTGCAATGATGAATTAAATCC...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp ATTTTGAACTCTTGGAGAGAAAGTCTGCTTACTTCATATAAATCAGATGGGGTTGCATGTGACAGAAGCTaGCCCAGTCCCCTCAGACTT +
Preference number: 5 (lower is better)
Translates to: ILNSWRESLLTSYKSDGVACDRS*PSPLRL
Trigger: AAGTCTGAGGGGACTGGGCAAGCTTCTGTCACATGC...AACCCCATCTGATTTATATGAAGTAAGCAGACTTTCTCTCCAAGAGTTCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412306.1
CDS CCA 90 bp TGCAATGTAGTAATTGCTAAAGTTGGCATCTGCTACATAGGGGGCTaGCTGGTAATAGCAAGTGACATTAGCCACATTAGGAATGACATT +
Preference number: 5 (lower is better)
Translates to: CNVVIAKVGICYIGG*LVIASDISHIRNDI
Trigger: AATGTCATTCCTAATGTGGCTAATGTCACTTGCTATTACCAGCCAGCCCCCTATGTAGCAGATGCCAACTTTAGCAATTACTACATTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACCATCGGTCAGAGTCATaGCACACTTTAACCATTTTC +
Preference number: 5 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNHRSES*HTLTIF
Trigger: GAAAATGGTTAAAGTGTGCAATGACTCTGACCGATG...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTGAAATGTCTCAGTCATaGGGTTCTCTGAACATTCAT +
Preference number: 5 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCEMSQS*GSLNIH
Trigger: ATGAATGTTCAGAGAACCCAATGACTGAGACATTTC...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCAGTGGAGTAGGTCTGTaGCTGGCACGTGAATACTGG +
Preference number: 5 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTSGVGL*LAREYW
Trigger: CCAGTATTCACGTGCCAGCAACAGACCTACTCCACT...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGTTCCACAGAAAGCACTaGCTACAAGCCTCAGACAGT +
Preference number: 5 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEFHRKH*LQASDS
Trigger: ACTGTCTGAGGCTTGTAGCAAGTGCTTTCTGTGGAA...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTTTTGGAGCAAGCCGTTaGTTAGCAAAACAAGATCAT +
Preference number: 5 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCFGASR*LAKQDH
Trigger: ATGATCTTGTTTTGCTAACAAACGGCTTGCTCCAAA...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCCAAATATTCTCCCATTaGTGGAATTTTATGGCTCAC +
Preference number: 5 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASQIFSH*WNFMAH
Trigger: GTGAGCCATAAAATTCCACAAATGGGAGAATATTTG...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACGTGGAGATTATGTGGTaGTTTCACAACACAAAGGGA +
Preference number: 5 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNVEIMW*FHNTKG
Trigger: TCCCTTTGTGTTGTGAAACAACCACATAATCTCCAC...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTATGCTAGAAGTTGTCTaGAGTACAGCCTGTTCTATA +
Preference number: 5 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCMLEVV*STACSI
Trigger: TATAGAACAGGCTGTACTCAAGACAACTTCTAGCAT...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATCCTTTAAAAACGGCATaGTCACAGGCTATGTGTTCT +
Preference number: 5 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHPLKTA*SQAMCS
Trigger: AGAACACATAGCCTGTGACAATGCCGTTTTTAAAGG...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAAAAGTGAGCAGATACTaGATCCCATTTCTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: ERCTKGSPDGLTWINLALKVSRY*IPFLER
Trigger: CCTTTCCAGAAATGGGATCAAGTATCTGCTCACTTT...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CTGCTGATTGTTACGAGAACTGCACCAACCTACTACTGTTCATTTGGAGCAAGCCATATTCTTCCATCCTaGCATTTTTGGAGCTACATT +
Preference number: 5 (lower is better)
Translates to: LLIVTRTAPTYYCSFGASHILPS*HFWSYI
Trigger: AATGTAGCTCCAAAAATGCAAGGATGGAAGAATATG...GCTTGCTCCAAATGAACAGTAGTAGGTTGGTGCAGTTCTCGTAACAATCAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTACATTTTTGCCACTGTaGTTTGACAGGGATATAAGA +
Preference number: 5 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCTFLPL*FDRDIR
Trigger: TCTTATATCCCTGTCAAACAACAGTGGCAAAAATGT...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACGGAACACATATACCTTaGAAGGGTCTTGATTTCATC +
Preference number: 5 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNGTHIP*KGLDFI
Trigger: GATGAAATCAAGACCCTTCAAAGGTATATGTGTTCC...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATGGAACACATATACCTTaGAAGGGTCTTGATTTCATC +
Preference number: 5 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHGTHIP*KGLDFI
Trigger: GATGAAATCAAGACCCTTCAAAGGTATATGTGTTCC...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATTTTGGAGCAAGCCGTTaGTTAGCAAAACAAGATCAT +
Preference number: 5 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHFGASR*LAKQDH
Trigger: ATGATCTTGTTTTGCTAACAAACGGCTTGCTCCAAA...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTTTATCTGTTAAATCTTaGGTCCTTGAGCACACTTTC +
Preference number: 5 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCLSVKS*VLEHTF
Trigger: GAAAGTGTGCTCAAGGACCAAAGATTTAACAGATAA...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATGGATTTAATTCATCATaGCAATATGCCCACGTCTCA +
Preference number: 5 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHGFNSS*QYAHVS
Trigger: TGAGACGTGGGCATATTGCAATGATGAATTAAATCC...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACATTAACAGCAGGTTATaGTTATGGCAGAGTCAGAGA +
Preference number: 5 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNINSRL*LWQSQR
Trigger: TCTCTGACTCTGCCATAACAATAACCTGCTGTTAAT...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAATTAACAGCAGGTTATaGTTATGGCAGAGTCAGAGA +
Preference number: 5 (lower is better)
Translates to: ERCTKGSPDGLTWINLALINSRL*LWQSQR
Trigger: TCTCTGACTCTGCCATAACAATAACCTGCTGTTAAT...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACATGCTAGAAGTTGTCTaGAGTACAGCCTGTTCTATA +
Preference number: 5 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNMLEVV*STACSI
Trigger: TATAGAACAGGCTGTACTCAAGACAACTTCTAGCAT...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATATGCTAGAAGTTGTCTaGAGTACAGCCTGTTCTATA +
Preference number: 5 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHMLEVV*STACSI
Trigger: TATAGAACAGGCTGTACTCAAGACAACTTCTAGCAT...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TACAAGCCTCAGACAGTAATCCCAACGTTGGAGTTCCCCTTTTTCCTGTATTGTCATATTCTTCCATCCTaGCATTTTTGGAGCTACATT +
Preference number: 5 (lower is better)
Translates to: YKPQTVIPTLEFPFFLYCHILPS*HFWSYI
Trigger: AATGTAGCTCCAAAAATGCAAGGATGGAAGAATATG...ACAATACAGGAAAAAGGGGAACTCCAACGTTGGGATTACTGTCTGAGGCTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GAAAGATGCACAAAAGGTAGTCCAGACGGATTAACCTGGATTAACCTAGCACTAGCAAGTCTCGTTAACTaGACATCTTCCAACTTTGTA +
Preference number: 5 (lower is better)
Translates to: ERCTKGSPDGLTWINLALASLVN*TSSNFV
Trigger: TACAAAGTTGGAAGATGTCAAGTTAACGAGACTTGC...TAGTGCTAGGTTAATCCAGGTTAATCCGTCTGGACTACCTTTTGTGCATCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATACATTTTTGCCACTGTaGTTTGACAGGGATATAAGA +
Preference number: 5 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHTFLPL*FDRDIR
Trigger: TCTTATATCCCTGTCAAACAACAGTGGCAAAAATGT...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCATCAGGAGAACCTGGTaGCTTCTAATGACAGGTCTC +
Preference number: 5 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTIRRTW*LLMTGL
Trigger: GAGACCTGTCATTAGAAGCAACCAGGTTCTCCTGAT...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCTTCCACAGAAAGCACTaGCTACAAGCCTCAGACAGT +
Preference number: 5 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTFHRKH*LQASDS
Trigger: ACTGTCTGAGGCTTGTAGCAAGTGCTTTCTGTGGAA...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp TCTCTCTCACCAGACATTCAAATTTTTAGGCCGCACATCCACAAAGAGAGACATCAAATATTCTCCCATTaGTGGAATTTTATGGCTCAC +
Preference number: 5 (lower is better)
Translates to: SLSPDIQIFRPHIHKERHQIFSH*WNFMAH
Trigger: GTGAGCCATAAAATTCCACAAATGGGAGAATATTTG...ATGTCTCTCTTTGTGGATGTGCGGCCTAAAAATTTGAATGTCTGGTGAGAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGCCTTTAAAAACGGCATaGTCACAGGCTATGTGTTCT +
Preference number: 5 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEPLKTA*SQAMCS
Trigger: AGAACACATAGCCTGTGACAATGCCGTTTTTAAAGG...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp CATAGCAAGCAGTCATCCACTAAGGTTGTGGAGATTATGTGGTTGTTTCACAACCATATTCTTCCATCCTaGCATTTTTGGAGCTACATT +
Preference number: 5 (lower is better)
Translates to: HSKQSSTKVVEIMWLFHNHILPS*HFWSYI
Trigger: AATGTAGCTCCAAAAATGCAAGGATGGAAGAATATG...GTTGTGAAACAACCACATAATCTCCACAACCTTAGTGGATGACTGCTTGCTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp ATTTTGAACTCTTGGAGAGAAAGTCTGCTTACTTCATATAAATCAGATGGGGTTCAGTCCCCTCAGACTTaGGACTCTTCTGTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: ILNSWRESLLTSYKSDGVQSPQT*DSSVVF
Trigger: AAAGACAACAGAAGAGTCCAAAGTCTGAGGGGACTG...AACCCCATCTGATTTATATGAAGTAAGCAGACTTTCTCTCCAAGAGTTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412306.1
CDS-3UTR CAA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGGCAAGTCTCGTTAACTaGACATCTTCCAACTTTGTA +
Preference number: 5 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEASLVN*TSSNFV
Trigger: TACAAAGTTGGAAGATGTCAAGTTAACGAGACTTGC...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCCACACATTTCTTCTCTaGTATCAGGAGAACCTGGTT +
Preference number: 5 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTHTFLL*YQENLV
Trigger: AACCAGGTTCTCCTGATACAAGAGAAGAAATGTGTG...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp ACAATGTTTCCTGGGAAGTTGCAATTAATTTTTCAAACCCAGGGCTTAAGTGAGCAAATATTCTCCCATTaGTGGAATTTTATGGCTCAC +
Preference number: 5 (lower is better)
Translates to: TMFPGKLQLIFQTQGLSEQIFSH*WNFMAH
Trigger: GTGAGCCATAAAATTCCACAAATGGGAGAATATTTG...CTCACTTAAGCCCTGGGTTTGAAAAATTAATTGCAACTTCCCAGGAAACATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCGTGGAGATTATGTGGTaGTTTCACAACACAAAGGGA +
Preference number: 5 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTVEIMW*FHNTKG
Trigger: TCCCTTTGTGTTGTGAAACAACCACATAATCTCCAC...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCAGTCATCCACTAAGGTaGTGGAGATTATGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTSHPLR*WRLCGC
Trigger: ACAACCACATAATCTCCACAACCTTAGTGGATGACT...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS-3UTR CAA 90 bp ACTCTTGGAGAGAAAGTCTGCTTACTTCATATAAATCAGATGGGGTTTACACTGCTCTCATGTGGAGATTaGGCTACTTTTCATTCTTTT +
Preference number: 5 (lower is better)
Translates to: TLGEKVCLLHINQMGFTLLSCGD*ATFHSF
Trigger: AAAAGAATGAAAAGTAGCCAAATCTCCACATGAGAG...CAGTGTAAACCCCATCTGATTTATATGAAGTAAGCAGACTTTCTCTCCAAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412306.1
CDS-3UTR CAA 90 bp GATCATGCTCCCACATCTATTAAAAGATACATAAGCTTTGCCAAACTTAAAACCGCAAGTCTCGTTAACTaGACATCTTCCAACTTTGTA +
Preference number: 5 (lower is better)
Translates to: DHAPTSIKRYISFAKLKTASLVN*TSSNFV
Trigger: TACAAAGTTGGAAGATGTCAAGTTAACGAGACTTGC...GGTTTTAAGTTTGGCAAAGCTTATGTATCTTTTAATAGATGTGGGAGCATGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS CCA 72 bp GCGACCCCTCCTGCGCCGCTGCCACCCCAGCTGCGGTaGTCCCGAACTGGCGGCTCTTGCTGCCACACACGC +
Preference number: 6 (lower is better)
Translates to: ATPPAPLPPQLR*SRTGGSCCHTR
Trigger: GCGTGTGTGGCAGCAAGAGCCGCCAGTTCGGGACCACCGCAGCTGGGGTGGCAGCGGCGCAGGAGGGGTCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS CAA 72 bp TTCACCCTCCGCCATGTAGTGCCCGCCGAGCGCCACTaGGCCCTGGTCAGTCCTGGAGGCGGCCGCCCCTTC +
Preference number: 6 (lower is better)
Translates to: FTLRHVVPAERH*ALVSPGGGRPF
Trigger: GAAGGGGCGGCCGCCTCCAGGACTGACCAGGGCCAAGTGGCGCTCGGCGGGCACTACATGGCGGAGGGTGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320172.11
CDS CAA 72 bp TTCACCCTCCGCCATGTAGTGCCCGCCGAGCGCCACTaGGCCCTGGTCAGTCCACTCCCTCCCCGCGACCCC +
Preference number: 6 (lower is better)
Translates to: FTLRHVVPAERH*ALVSPLPPRDP
Trigger: GGGGTCGCGGGGAGGGAGTGGACTGACCAGGGCCAAGTGGCGCTCGGCGGGCACTACATGGCGGAGGGTGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369756.3
CDS CCA 72 bp TGCGCCGCTGCCACCCCAGCTGCGGTGGTCCCGAACTaGCGGCTCTTGCTGCCACACACGCTCGTGTCTCTG +
Preference number: 6 (lower is better)
Translates to: CAAATPAAVVPN*RLLLPHTLVSL
Trigger: CAGAGACACGAGCGTGTGTGGCAGCAAGAGCCGCCAGTTCGGGACCACCGCAGCTGGGGTGGCAGCGGCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS CCA 72 bp CTGGAAAGCGCAAGCGAGAGTCCCGTCTGTGTCACCTaGAGGCGGCCGCCCCTTCTAGGAGCGCAGCGAGCG +
Preference number: 6 (lower is better)
Translates to: LESASESPVCVT*RRPPLLGAQRA
Trigger: CGCTCGCTGCGCTCCTAGAAGGGGCGGCCGCCTCCAGGTGACACAGACGGGACTCTCGCTTGCGCTTTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369754.7
CDS GCA 72 bp GGCTTTCGCAATAGTCCAAGCAATGCCCACCGAAGCTaGCGCCACCGCCGAAGTCGCCGCCGCCGAAGTCGC +
Preference number: 6 (lower is better)
Translates to: GFRNSPSNAHRS*RHRRSRRRRSR
Trigger: GCGACTTCGGCGGCGGCGACTTCGGCGGTGGCGGCAGCTTCGGTGGGCATTGCTTGGACTATTGCGAAAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS GCA 72 bp CCACCCCAGCTGCGGTGGTCCCGAACTGGCGGCTCTTaGTGCCACACACGCTCGTGTCTCTGGAGCTTTAGC +
Preference number: 6 (lower is better)
Translates to: PPQLRWSRTGGS*CHTRSCLWSFS
Trigger: GCTAAAGCTCCAGAGACACGAGCGTGTGTGGCAGCAAGAGCCGCCAGTTCGGGACCACCGCAGCTGGGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS GCA 72 bp CCCCAGCTGCGGTGGTCCCGAACTGGCGGCTCTTGCTaGCACACACGCTCGTGTCTCTGGAGCTTTAGCAGT +
Preference number: 6 (lower is better)
Translates to: PQLRWSRTGGSC*HTRSCLWSFSS
Trigger: ACTGCTAAAGCTCCAGAGACACGAGCGTGTGTGGCAGCAAGAGCCGCCAGTTCGGGACCACCGCAGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS TCA 72 bp TCCAACAGGCAGTCCAGCACGACGTCCTTCACAGTCTaGAACTCCCCTTCCCCGCGCAGGTCGGCGCAGAAG +
Preference number: 6 (lower is better)
Translates to: SNRQSSTTSFTV*NSPSPRRSAQK
Trigger: CTTCTGCGCCGACCTGCGCGGGGAAGGGGAGTTTCAGACTGTGAAGGACGTCGTGCTGGACTGCCTGTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
ENST00000412306.1
ENST00000423467.1
CDS GCA 72 bp ATGGTCTCGCTCAGGATGCCGTCCAGCCGCTGCACTTaGTCCCAGTTCAGCACATTGCAGTGCGCCGTAGGG +
Preference number: 6 (lower is better)
Translates to: MVSLRMPSSRCT*SQFSTLQCAVG
Trigger: CCCTACGGCGCACTGCAATGTGCTGAACTGGGAGCAAGTGCAGCGGCTGGACGGCATCCTGAGCGAGACCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS CAA 72 bp AATGGTCTCGCTCAGGATGCCGTCCAGCCGCTGCACTaGCTCCCAGTTCAGCACATTGCAGTGCGCCGTAGG +
Preference number: 6 (lower is better)
Translates to: NGLAQDAVQPLH*LPVQHIAVRRR
Trigger: CCTACGGCGCACTGCAATGTGCTGAACTGGGAGCAAGTGCAGCGGCTGGACGGCATCCTGAGCGAGACCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS CAA 90 bp GTGAATCGGAATGGTCTCGCTCAGGATGCCGTCCAGCCGCTGCACTaGCTCCCAGTTCAGCACATTGCAGTGCGCCGTAGGGCTTTCGCA +
Preference number: 6 (lower is better)
Translates to: VNRNGLAQDAVQPLH*LPVQHIAVRRRAFA
Trigger: TGCGAAAGCCCTACGGCGCACTGCAATGTGCTGAACTGGGAGCAAGTGCAGCGGCTGGACGGCATCCTGAGCGAGACCATTCCGATTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS GCA 72 bp AGAGCGAAACCGAGAGGCGGCAACACTTCCAGGAGCTaGGAGCGCGCTCAGACAGCAAATAGCGACTTCGTC +
Preference number: 6 (lower is better)
Translates to: RAKPRGGNTSRS*ERAQTANSDFV
Trigger: GACGAAGTCGCTATTTGCTGTCTGAGCGCGCTCGCAGCTCCTGGAAGTGTTGCCGCCTCTCGGTTTCGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320172.11
ENST00000369754.7
CDS CAA 72 bp TCATCAGAGGCGGGCCTAAAGCCCCTCACCAAGAGGTaGCAGTACTTAAGCAGGCCTCCCCCTCGGATTTCC +
Preference number: 6 (lower is better)
Translates to: SSEAGLKPLTKR*QYLSRPPPRIS
Trigger: GGAAATCCGAGGGGGAGGCCTGCTTAAGTACTGCAACCTCTTGGTGAGGGGCTTTAGGCCCGCCTCTGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS CAA 72 bp TTCACCCTCCGCCATGTAGTGCCCGCCGAGCGCCACTaGGCCCTGGTCAGTCCAAAAGTATCTCTGATGCAT +
Preference number: 6 (lower is better)
Translates to: FTLRHVVPAERH*ALVSPKVSLMH
Trigger: ATGCATCAGAGATACTTTTGGACTGACCAGGGCCAAGTGGCGCTCGGCGGGCACTACATGGCGGAGGGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369754.7
CDS CAA 90 bp GTCTTGATTTCATCAGAGGCGGGCCTAAAGCCCCTCACCAAGAGGTaGCAGTACTTAAGCAGGCCTCCCCCTCGGATTTCCTCTGGGTTC +
Preference number: 6 (lower is better)
Translates to: VLISSEAGLKPLTKR*QYLSRPPPRISSGF
Trigger: GAACCCAGAGGAAATCCGAGGGGGAGGCCTGCTTAAGTACTGCAACCTCTTGGTGAGGGGCTTTAGGCCCGCCTCTGATGAAATCAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS CCA 72 bp ACTGGCGGCTCTTGCTGCCACACACGCTCGTGTCTCTaGAGCTTTAGCAGTTGTGCGGGGAAAATGTCTTCA +
Preference number: 6 (lower is better)
Translates to: TGGSCCHTRSCL*SFSSCAGKMSS
Trigger: TGAAGACATTTTCCCCGCACAACTGCTAAAGCTCCAGAGACACGAGCGTGTGTGGCAGCAAGAGCCGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369754.7
ENST00000369756.3
CDS CCA 72 bp GCAGTACTTAAGCAGGCCTCCCCCTCGGATTTCCTCTaGGTTCCTGGTGGCAATGATCTTGTTACAAAGGTG +
Preference number: 6 (lower is better)
Translates to: AVLKQASPSDFL*VPGGNDLVTKV
Trigger: CACCTTTGTAACAAGATCATTGCCACCAGGAACCCAGAGGAAATCCGAGGGGGAGGCCTGCTTAAGTACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS TCA 72 bp CTCCCCCTCGGATTTCCTCTGGGTTCCTGGTGGCAATaGTCTTGTTACAAAGGTGATCAAAGGCTTCCTGGA +
Preference number: 6 (lower is better)
Translates to: LPLGFPLGSWWQ*SCYKGDQRLPG
Trigger: TCCAGGAAGCCTTTGATCACCTTTGTAACAAGATCATTGCCACCAGGAACCCAGAGGAAATCCGAGGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS TCA 72 bp CCCATCAGGCACACTGTGCTCTCATTTACCACTCCATaGAGGGTCATGAGATACTCATACTTGCGGTCTTCC +
Preference number: 6 (lower is better)
Translates to: PIRHTVLSFTTP*RVMRYSYLRSS
Trigger: GGAAGACCGCAAGTATGAGTATCTCATGACCCTTCATGGAGTGGTAAATGAGAGCACAGTGTGCCTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
ENST00000423467.1
CDS TCA 72 bp AGGGTAGCCAAGTGGAGTAGGTCTGTTGCTGGCACGTaGATACTGGCTGAACCTGTGCAATGTAGTAATTGC +
Preference number: 6 (lower is better)
Translates to: RVAKWSRSVAGT*ILAEPVQCSNC
Trigger: GCAATTACTACATTGCACAGGTTCAGCCAGTATTCACGTGCCAGCAACAGACCTACTCCACTTGGCTACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS GCA 72 bp GGTCTGTTGCTGGCACGTGAATACTGGCTGAACCTGTaGAATGTAGTAATTGCTAAAGTTGGCATCTGCTAC +
Preference number: 6 (lower is better)
Translates to: GLLLAREYWLNL*NVVIAKVGICY
Trigger: GTAGCAGATGCCAACTTTAGCAATTACTACATTGCACAGGTTCAGCCAGTATTCACGTGCCAGCAACAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS GCA 72 bp AACCTGTGCAATGTAGTAATTGCTAAAGTTGGCATCTaGTACATAGGGGGCTGGCTGGTAATAGCAAGTGAC +
Preference number: 6 (lower is better)
Translates to: NLCNVVIAKVGI*YIGGWLVIASD
Trigger: GTCACTTGCTATTACCAGCCAGCCCCCTATGTAGCAGATGCCAACTTTAGCAATTACTACATTGCACAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3
CDS CCA 72 bp GTAATTGCTAAAGTTGGCATCTGCTACATAGGGGGCTaGCTGGTAATAGCAAGTGACATTAGCCACATTAGG +
Preference number: 6 (lower is better)
Translates to: VIAKVGICYIGG*LVIASDISHIR
Trigger: CCTAATGTGGCTAATGTCACTTGCTATTACCAGCCAGCCCCCTATGTAGCAGATGCCAACTTTAGCAATTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320172.11
ENST00000369754.7
ENST00000369756.3