RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TENT4B (Homo sapiens)

Ensembl gene IDs: ENSG00000121274

Ensembl transcript IDs: ENST00000357464.4, ENST00000436909.8, ENST00000561678.7, ENST00000562717.1

Found 459 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGAGGACTCCAAGGATACATCTTGCGACCCTACTCGGTTCCCAGTaGACGGACGGCAAAGCAGCTGTTTCGGGGTTTTGCATGGTGTTG +
Preference number: 1 (lower is better)
Translates to: ERTPRIHLATLLGSQ*TDGKAAVSGFCMVL
Trigger: CAACACCATGCAAAACCCCGAAACAGCTGCTTTGCCGTCCGTCCACTGGGAACCGAGTAGGGTCGCAAGATGTATCCTTGGAGTCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR GCA 90 bp GCTGTTGGATGTGTTAGTGGTTTGGGTGCTTTGCATTTTCCCAACTaGCTGAGAGGACTCCAAGGATACATCTTGCGACCCTACTCGGTT +
Preference number: 1 (lower is better)
Translates to: AVGCVSGLGALHFPN*LRGLQGYILRPYSV
Trigger: AACCGAGTAGGGTCGCAAGATGTATCCTTGGAGTCCTCTCAGGCAGTTGGGAAAATGCAAAGCACCCAAACCACTAACACATCCAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR GCA 90 bp CACTGGAGAGGGCTTTGCAATGAACATGTCACAGCAAGAGAATCCTaGACGTCACGGTGGTCATTACTCTTTTCTGACCCTCTAGTGTTT +
Preference number: 1 (lower is better)
Translates to: HWRGLCNEHVTARES*TSRWSLLFSDPLVF
Trigger: AAACACTAGAGGGTCAGAAAAGAGTAATGACCACCGTGACGTGCAGGATTCTCTTGCTGTGACATGTTCATTGCAAAGCCCTCTCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR GCA 90 bp AGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTaGAATGAACATGTCACAGCAAGAGAATCCTGCACGTCACGGTGG +
Preference number: 1 (lower is better)
Translates to: RSTLITTPPSHWRGL*NEHVTARESCTSRW
Trigger: CCACCGTGACGTGCAGGATTCTCTTGCTGTGACATGTTCATTGCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR CCA 90 bp TCAAGGAACCATGGCTTGTTTGAGTTGTACCTTGGAAGCCTTTGCTaGAAGAACGAAAGAGCCTTGCTGATCCATGCTGAGATTTGTTGG +
Preference number: 1 (lower is better)
Translates to: SRNHGLFELYLGSLC*KNERALLIHAEICW
Trigger: CCAACAAATCTCAGCATGGATCAGCAAGGCTCTTTCGTTCTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR CCA 90 bp CTTTGCAATGAACATGTCACAGCAAGAGAATCCTGCACGTCACGGTaGTCATTACTCTTTTCTGACCCTCTAGTGTTTCCAGAAACCCCA +
Preference number: 1 (lower is better)
Translates to: LCNEHVTARESCTSR*SLLFSDPLVFPETP
Trigger: TGGGGTTTCTGGAAACACTAGAGGGTCAGAAAAGAGTAATGACCACCGTGACGTGCAGGATTCTCTTGCTGTGACATGTTCATTGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR GCA 90 bp TACAGAGGTCTGAGAGGGGCGCGTCCCTCTTGTGTTTCCTCTTTTTaGCATGGTAATACTGATTATTGGATTTGCCTTGATGTTGTTTGT +
Preference number: 1 (lower is better)
Translates to: YRGLRGARPSCVSSF*HGNTDYWICLDVVC
Trigger: ACAAACAACATCAAGGCAAATCCAATAATCAGTATTACCATGGCAAAAAGAGGAAACACAAGAGGGACGCGCCCCTCTCAGACCTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR CCA 90 bp GTGATTTCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTaGAGAGGGCTTTGCAATGAACATGTCACAGCAAGAGAATCCTGC +
Preference number: 1 (lower is better)
Translates to: VISNRSTLITTPPSH*RGLCNEHVTARESC
Trigger: GCAGGATTCTCTTGCTGTGACATGTTCATTGCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGAAATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR CCA 90 bp TCTGGTAAATTCCTTAGTGTCTCTGCAGTGGTAACTAGACAAGATTaGAAAGTTTTCAAGATGATTCAAACCTCCAGCACCTCACAGGAG +
Preference number: 1 (lower is better)
Translates to: SGKFLSVSAVVTRQD*KVFKMIQTSSTSQE
Trigger: CTCCTGTGAGGTGCTGGAGGTTTGAATCATCTTGAAAACTTTCCAATCTTGTCTAGTTACCACTGCAGAGACACTAAGGAATTTACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR CCA 90 bp CGTCCCTCTTGTGTTTCCTCTTTTTGCCATGGTAATACTGATTATTaGATTTGCCTTGATGTTGTTTGTTTGTCATCAAGGAACCATGGC +
Preference number: 1 (lower is better)
Translates to: RPSCVSSFCHGNTDY*ICLDVVCLSSRNHG
Trigger: GCCATGGTTCCTTGATGACAAACAAACAACATCAAGGCAAATCCAATAATCAGTATTACCATGGCAAAAAGAGGAAACACAAGAGGGACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR GCA 90 bp AAAATCTTCCAGGTGTGCAATTCATTCATAGTTTTCATCACTGGTTaGCCAGTGATACGGCCTCAGGAAATGTTGAGATTTCTTAAATCA +
Preference number: 1 (lower is better)
Translates to: KIFQVCNSFIVFITG*PVIRPQEMLRFLKS
Trigger: TGATTTAAGAAATCTCAACATTTCCTGAGGCCGTATCACTGGGCAACCAGTGATGAAAACTATGAATGAATTGCACACCTGGAAGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR CCA 90 bp ATAACAATGTGTGTTAAGGCAGTGCTGCTTTTTAGTAGTAAAGACTaGAGACTCTTGACACGTCTAACAAACAAGCTTGTGATTTATTTT +
Preference number: 1 (lower is better)
Translates to: ITMCVKAVLLFSSKD*RLLTRLTNKLVIYF
Trigger: AAAATAAATCACAAGCTTGTTTGTTAGACGTGTCAAGAGTCTCCAGTCTTTACTACTAAAAAGCAGCACTGCCTTAACACACATTGTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR CAA 90 bp GCTTTGCATTTTCCCAACTGCCTGAGAGGACTCCAAGGATACATCTaGCGACCCTACTCGGTTCCCAGTGGACGGACGGCAAAGCAGCTG +
Preference number: 2 (lower is better)
Translates to: ALHFPNCLRGLQGYI*RPYSVPSGRTAKQL
Trigger: CAGCTGCTTTGCCGTCCGTCCACTGGGAACCGAGTAGGGTCGCAAGATGTATCCTTGGAGTCCTCTCAGGCAGTTGGGAAAATGCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR CAA 90 bp ATATCTCCCAGGAGTCCCTGCGCAACTGTCCTGAGCATGAGATCATaGCACAGAGAAGACAGTCCACCGCGCAGCGCTGACTATCTACAG +
Preference number: 2 (lower is better)
Translates to: ISPRSPCATVLSMRS*HREDSPPRSADYLQ
Trigger: CTGTAGATAGTCAGCGCTGCGCGGTGGACTGTCTTCTCTGTGCAATGATCTCATGCTCAGGACAGTTGCGCAGGGACTCCTGGGAGATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR-3UTR GCA 90 bp CTGAGCATGAGATCATTGCACAGAGAAGACAGTCCACCGCGCAGCGCTGACTATTCCAAGGATACATCTTaGGACCCTACTCGGTTCCCA +
Preference number: 2 (lower is better)
Translates to: LSMRSLHREDSPPRSADYSKDTS*DPTRFP
Trigger: TGGGAACCGAGTAGGGTCGCAAGATGTATCCTTGGA...ATAGTCAGCGCTGCGCGGTGGACTGTCTTCTCTGTGCAATGATCTCATGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR-3UTR GCA 90 bp CTGAGCATGAGATCATTGCACAGAGAAGACAGTCCACCGCGCAGCGCTGACTATGCTGTTTCGGGGTTTTaGATGGTGTTGCATCGGAAT +
Preference number: 2 (lower is better)
Translates to: LSMRSLHREDSPPRSADYAVSGF*MVLHRN
Trigger: ATTCCGATGCAACACCATGCAAAACCCCGAAACAGC...ATAGTCAGCGCTGCGCGGTGGACTGTCTTCTCTGTGCAATGATCTCATGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR CAA 90 bp AGGCATGGCCTAACCTCTAAGAGGCAAGTACTGAACTTCACCAAGTaGCTGGCTTTGGAGAATGCTTTTCCAAGTCCTCCTTTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: RHGLTSKRQVLNFTK*LALENAFPSPPFPP
Trigger: GGGAGGGAAAGGAGGACTTGGAAAAGCATTCTCCAAAGCCAGCAACTTGGTGAAGTTCAGTACTTGCCTCTTAGAGGTTAGGCCATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR TCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCCTATCTACAGAGGTCTaGGAGGGGCGCGTCCCTCTT +
Preference number: 2 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCLSTEV*EGRVPL
Trigger: AAGAGGGACGCGCCCCTCTCAGACCTCTGTAGATAG...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR CAA 90 bp CTAACCTCTAAGAGGCAAGTACTGAACTTCACCAAGTTGCTGGCTTaGGAGAATGCTTTTCCAAGTCCTCCTTTCCCTCCCCTACCCAAT +
Preference number: 2 (lower is better)
Translates to: LTSKRQVLNFTKLLA*ENAFPSPPFPPLPN
Trigger: ATTGGGTAGGGGAGGGAAAGGAGGACTTGGAAAAGCATTCTCCAAAGCCAGCAACTTGGTGAAGTTCAGTACTTGCCTCTTAGAGGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR GCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTCTCCCAGGAGTCCCTaGGCAACTGTCCTGAGCATG +
Preference number: 2 (lower is better)
Translates to: QMCNNQRECTTSISLVLSSPRSP*ATVLSM
Trigger: CATGCTCAGGACAGTTGCGCAGGGACTCCTGGGAGA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR TCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCCTTGCTGATCCATGCTaGGATTTGTTGGTGCTGTTG +
Preference number: 2 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCLADPC*DLLVLL
Trigger: CAACAGCACCAACAAATCTCAGCATGGATCAGCAAG...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR-3UTR TCA 90 bp TCATCAAGGAACCATGGCTTGTTTGAGTTGTACCTTGGAAGCCTTTGCTGGAAGACGAAAGAGCCTTGCTaGTCCATGCTGAGATTTGTT +
Preference number: 2 (lower is better)
Translates to: SSRNHGLFELYLGSLCWKTKEPC*SMLRFV
Trigger: AACAAATCTCAGCATGGATCAGCAAGGCTCTTTCGT...CTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR-3UTR TCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCAGTTGTCAGTCTTCATaGTCCATTCTGTGGCGAGCT +
Preference number: 2 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCSCQSS*SILWRA
Trigger: AGCTCGCCACAGAATGGATCATGAAGACTGACAACT...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR CAA 90 bp CTTGATGTTGTTTGTTTGTCATCAAGGAACCATGGCTTGTTTGAGTaGTACCTTGGAAGCCTTTGCTGGAAGAACGAAAGAGCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: LDVVCLSSRNHGLFE*YLGSLCWKNERALL
Trigger: CAGCAAGGCTCTTTCGTTCTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGATGACAAACAAACAACATCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR-3UTR TCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAGAACCATGGCTTGTTTaGGTTGTACCTTGGAAGCCT +
Preference number: 2 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQEPWLV*VVPWKP
Trigger: AGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTC...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR-3UTR TCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCGCTAGATTTGAAAACTaGGTGCGACATCTCCAAACC +
Preference number: 2 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCARFEN*VRHLQT
Trigger: GGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAGC...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR GCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAACAGCAAGAGAATCCTaGACGTCACGGTGGTCATTA +
Preference number: 2 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQTARES*TSRWSL
Trigger: TAATGACCACCGTGACGTGCAGGATTCTCTTGCTGT...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR GCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAACACTGGAGAGGGCTTTaGAATGAACATGTCACAGCA +
Preference number: 2 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQHWRGL*NEHVTA
Trigger: TGCTGTGACATGTTCATTGCAAAGCCCTCTCCAGTG...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR CCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAACTTGGAAGCCTTTGCTaGAAGAACGAAAGAGCCTTG +
Preference number: 2 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQLGSLC*KNERAL
Trigger: CAAGGCTCTTTCGTTCTTCCAGCAAAGGCTTCCAAG...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR-3UTR TCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACATTTTCCCAACTGCCTaGGAGGACTCCAAGGATACA +
Preference number: 2 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNIFPTA*EDSKDT
Trigger: TGTATCCTTGGAGTCCTCTCAGGCAGTTGGGAAAAT...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR-3UTR TCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTAGTTGTCAGTCTTCATaGTCCATTCTGTGGCGAGCT +
Preference number: 2 (lower is better)
Translates to: QMCNNQRECTTSISLVLSSCQSS*SILWRA
Trigger: AGCTCGCCACAGAATGGATCATGAAGACTGACAACT...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR TCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAAGTAAGATTTTGTGCTaGCACCTCACCAACCCATCA +
Preference number: 2 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQSKILC*HLTNPS
Trigger: TGATGGGTTGGTGAGGTGTCAGCACAAAATCTTACT...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR TCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAAAGTCGCTAAGGGTGTaGAGTCAAGATGGCTTAGAA +
Preference number: 2 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQKSLRV*SQDGLE
Trigger: TTCTAAGCCATCTTGACTTCACACCCTTAGCGACTT...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR GCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCGAGAGGAAAAATTTTTaGAGCAGGACACAAGGGTTC +
Preference number: 2 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCERKNF*SRTQGF
Trigger: GAACCCTTGTGTCCTGCTGCAAAAATTTTTCCTCTC...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR GCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAATTAGAGAAGCCAGCATaGAAAGTCTGTGGAACTCGA +
Preference number: 2 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQLEKPA*KVCGTR
Trigger: TCGAGTTCCACAGACTTTGCATGCTGGCTTCTCTAA...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR GCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAACCATGTTTTGCCCTGTaGAGATCTAGGAATATCTGG +
Preference number: 2 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQPCFAL*RSRNIW
Trigger: CCAGATATTCCTAGATCTGCACAGGGCAAAACATGG...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR GCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTCACTGGAGAGGGCTTTaGAATGAACATGTCACAGCA +
Preference number: 2 (lower is better)
Translates to: QMCNNQRECTTSISLVLSHWRGL*NEHVTA
Trigger: TGCTGTGACATGTTCATTGCAAAGCCCTCTCCAGTG...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR CCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCATCTCGTCTCAGAAATaGCTGCATTTAACAGAGCCA +
Preference number: 2 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCISSQK*LHLTEP
Trigger: TGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR CCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTCCTGCACGTCACGGTaGTCATTACTCTTTTCTGAC +
Preference number: 2 (lower is better)
Translates to: QMCNNQRECTTSISLVLSSCTSR*SLLFSD
Trigger: GTCAGAAAAGAGTAATGACCACCGTGACGTGCAGGA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR TCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTAAAAAGAATAAGAGATaGGAAACAGGCACACGCAGC +
Preference number: 2 (lower is better)
Translates to: KNAHPIAHVLPCADLGISKKNKR*ETGTRS
Trigger: GCTGCGTGTGCCTGTTTCTCATCTCTTATTCTTTTT...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR GCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAGAGAGGAAAAATTTTTaGAGCAGGACACAAGGGTTC +
Preference number: 2 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQERKNF*SRTQGF
Trigger: GAACCCTTGTGTCCTGCTGCAAAAATTTTTCCTCTC...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR GCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACTTAGAGAAGCCAGCATaGAAAGTCTGTGGAACTCGA +
Preference number: 2 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNLEKPA*KVCGTR
Trigger: TCGAGTTCCACAGACTTTGCATGCTGGCTTCTCTAA...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR GCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTGTACACATACATGACTaGCTGAGAAATGTCACCAGA +
Preference number: 2 (lower is better)
Translates to: KNAHPIAHVLPCADLGISVHIHD*LRNVTR
Trigger: TCTGGTGACATTTCTCAGGCAGTCATGTATGTGTAC...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR CCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAGATCACTTTCCCCTTTaGAATCTGGACTTCCTATCA +
Preference number: 2 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQDHFPL*NLDFLS
Trigger: TGATAGGAAGTCCAGATTCCAAAGGGGAAAGTGATC...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR CCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAATCTCGTCTCAGAAATaGCTGCATTTAACAGAGCCA +
Preference number: 2 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQISSQK*LHLTEP
Trigger: TGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR TCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCTGTCCATTAATGGTCTaGTTGGTCTTCAGTATTTCA +
Preference number: 2 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCCPLMV*LVFSIS
Trigger: TGAAATACTGAAGACCAATCAGACCATTAATGGACA...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR GCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAAATAACCAAAGGGAATaGACTACATCCATCTCTCTG +
Preference number: 2 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQNNQRE*TTSISL
Trigger: CAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATT...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR CCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTGATCACTTTCCCCTTTaGAATCTGGACTTCCTATCA +
Preference number: 2 (lower is better)
Translates to: QMCNNQRECTTSISLVLSDHFPL*NLDFLS
Trigger: TGATAGGAAGTCCAGATTCCAAAGGGGAAAGTGATC...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR CCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAAATGTTTTGACAAGATaGCAGGTAGCTAGAGTCTTG +
Preference number: 2 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQNVLTR*QVARVL
Trigger: CAAGACTCTAGCTACCTGCCATCTTGTCAAAACATT...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR CAA 90 bp TGCCATGGTAATACTGATTATTGGATTTGCCTTGATGTTGTTTGTTaGTCATCAAGGAACCATGGCTTGTTTGAGTTGTACCTTGGAAGC +
Preference number: 2 (lower is better)
Translates to: CHGNTDYWICLDVVC*SSRNHGLFELYLGS
Trigger: GCTTCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGATGACAAACAAACAACATCAAGGCAAATCCAATAATCAGTATTACCATGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR CAA 90 bp CAGCAGAAAAAGACAATTAAAAATGCTCACCCTATAGCCCATGTTTaGCCCTGTGCAGATCTAGGAATATCTGGAGCCAAATCAAATAAC +
Preference number: 2 (lower is better)
Translates to: QQKKTIKNAHPIAHV*PCADLGISGAKSNN
Trigger: GTTATTTGATTTGGCTCCAGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTTAATTGTCTTTTTCTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR TCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAATGTCCATTAATGGTCTaGTTGGTCTTCAGTATTTCA +
Preference number: 2 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQCPLMV*LVFSIS
Trigger: TGAAATACTGAAGACCAATCAGACCATTAATGGACA...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR TCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTTGTCCATTAATGGTCTaGTTGGTCTTCAGTATTTCA +
Preference number: 2 (lower is better)
Translates to: KNAHPIAHVLPCADLGISCPLMV*LVFSIS
Trigger: TGAAATACTGAAGACCAATCAGACCATTAATGGACA...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR TCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAAGCAAAGGAAGGTTATaGTTCATGGATATGAATGGA +
Preference number: 2 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQSKGRL*FMDMNG
Trigger: TCCATTCATATCCATGAATCATAACCTTCCTTTGCT...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR TCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTGAAATGTCACCAGAGTaGGGGAGAATTTGTAAAATC +
Preference number: 2 (lower is better)
Translates to: QMCNNQRECTTSISLVLSEMSPE*GRICKI
Trigger: GATTTTACAAATTCTCCCTCACTCTGGTGACATTTC...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR CCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTAATGTTTTGACAAGATaGCAGGTAGCTAGAGTCTTG +
Preference number: 2 (lower is better)
Translates to: QMCNNQRECTTSISLVLSNVLTR*QVARVL
Trigger: CAAGACTCTAGCTACCTGCCATCTTGTCAAAACATT...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR CAA 90 bp AGAATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATaGATGCTAAACATAAGAGCTTTCACCCTGAAAGAAAGCATTTTC +
Preference number: 2 (lower is better)
Translates to: RISSQKWLHLTEPYT*MLNIRAFTLKESIF
Trigger: GAAAATGCTTTCTTTCAGGGTGAAAGCTCTTATGTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR TCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTTTACACGAGTACTATaGGTTTCCAGTTTTGGAACA +
Preference number: 2 (lower is better)
Translates to: QMCNNQRECTTSISLVLSFTRVL*VSSFGT
Trigger: TGTTCCAAAACTGGAAACTCATAGTACTCGTGTAAA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR CCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTCAACTGTTGAAGACTaGAGGGCAATTACTTGTAAA +
Preference number: 2 (lower is better)
Translates to: QMCNNQRECTTSISLVLSSTVED*RAITCK
Trigger: TTTACAAGTAATTGCCCTCCAGTCTTCAACAGTTGA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR TCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACTTTACACGAGTACTATaGGTTTCCAGTTTTGGAACA +
Preference number: 2 (lower is better)
Translates to: LDLKTECDISKPNKDIQNFTRVL*VSSFGT
Trigger: TGTTCCAAAACTGGAAACTCATAGTACTCGTGTAAA...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR CCA 72 bp CCAAGGATACATCTTGCGACCCTACTCGGTTCCCAGTaGACGGACGGCAAAGCAGCTGTTTCGGGGTTTTGC +
Preference number: 3 (lower is better)
Translates to: PRIHLATLLGSQ*TDGKAAVSGFC
Trigger: GCAAAACCCCGAAACAGCTGCTTTGCCGTCCGTCCACTGGGAACCGAGTAGGGTCGCAAGATGTATCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR-3UTR CAA 90 bp CTGAGCATGAGATCATTGCACAGAGAAGACAGTCCACCGCGCAGCGCTGACTATAGCTGTTTCGGGGTTTaGCATGGTGTTGCATCGGAA +
Preference number: 3 (lower is better)
Translates to: LSMRSLHREDSPPRSADYSCFGV*HGVASE
Trigger: TTCCGATGCAACACCATGCAAAACCCCGAAACAGCT...ATAGTCAGCGCTGCGCGGTGGACTGTCTTCTCTGTGCAATGATCTCATGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR GCA 72 bp TGTGTTAGTGGTTTGGGTGCTTTGCATTTTCCCAACTaGCTGAGAGGACTCCAAGGATACATCTTGCGACCC +
Preference number: 3 (lower is better)
Translates to: CVSGLGALHFPN*LRGLQGYILRP
Trigger: GGGTCGCAAGATGTATCCTTGGAGTCCTCTCAGGCAGTTGGGAAAATGCAAAGCACCCAAACCACTAACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR-3UTR CAA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCCTCCAAGGATACATCTaGCGACCCTACTCGGTTCCC +
Preference number: 3 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCLQGYI*RPYSVP
Trigger: GGGAACCGAGTAGGGTCGCAAGATGTATCCTTGGAG...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR GCA 72 bp GGGCTTTGCAATGAACATGTCACAGCAAGAGAATCCTaGACGTCACGGTGGTCATTACTCTTTTCTGACCCT +
Preference number: 3 (lower is better)
Translates to: GLCNEHVTARES*TSRWSLLFSDP
Trigger: AGGGTCAGAAAAGAGTAATGACCACCGTGACGTGCAGGATTCTCTTGCTGTGACATGTTCATTGCAAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR CCA 72 bp CATGGCTTGTTTGAGTTGTACCTTGGAAGCCTTTGCTaGAAGAACGAAAGAGCCTTGCTGATCCATGCTGAG +
Preference number: 3 (lower is better)
Translates to: HGLFELYLGSLC*KNERALLIHAE
Trigger: CTCAGCATGGATCAGCAAGGCTCTTTCGTTCTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR-3UTR CAA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTAGGGGCGCGTCCCTCTaGTGTTTCCTCTTTTTGCCA +
Preference number: 3 (lower is better)
Translates to: KNAHPIAHVLPCADLGISRGASL*CFLFLP
Trigger: TGGCAAAAAGAGGAAACACAAGAGGGACGCGCCCCT...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR CCA 72 bp GAACATGTCACAGCAAGAGAATCCTGCACGTCACGGTaGTCATTACTCTTTTCTGACCCTCTAGTGTTTCCA +
Preference number: 3 (lower is better)
Translates to: EHVTARESCTSR*SLLFSDPLVFP
Trigger: TGGAAACACTAGAGGGTCAGAAAAGAGTAATGACCACCGTGACGTGCAGGATTCTCTTGCTGTGACATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR CAA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTAGTGGTTTGGGTGCTTaGCATTTTCCCAACTGCCTG +
Preference number: 3 (lower is better)
Translates to: KNAHPIAHVLPCADLGISSGLGA*HFPNCL
Trigger: CAGGCAGTTGGGAAAATGCAAAGCACCCAAACCACT...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTCAGGTAGCTAGAGTCTaGAGGGTCAGAAACCAAGGC +
Preference number: 3 (lower is better)
Translates to: QMCNNQRECTTSISLVLSQVARV*RVRNQG
Trigger: GCCTTGGTTTCTGACCCTCAAGACTCTAGCTACCTG...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR CCA 72 bp CTTCCAGGTGTGCAATTCATTCATAGTTTTCATCACTaGTTGCCCAGTGATACGGCCTCAGGAAATGTTGAG +
Preference number: 3 (lower is better)
Translates to: LPGVQFIHSFHH*LPSDTASGNVE
Trigger: CTCAACATTTCCTGAGGCCGTATCACTGGGCAACCAGTGATGAAAACTATGAATGAATTGCACACCTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR CAA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCAAGAACGAAAGAGCCTaGCTGATCCATGCTGAGATT +
Preference number: 3 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCKNERA*LIHAEI
Trigger: AATCTCAGCATGGATCAGCAAGGCTCTTTCGTTCTT...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR-3UTR CAA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCTGTTTGAGTTGTACCTaGGAAGCCTTTGCTGGAAGA +
Preference number: 3 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCCLSCT*EAFAGR
Trigger: TCTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACA...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR-3UTR CAA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACGGAACCATGGCTTGTTaGAGTTGTACCTTGGAAGCC +
Preference number: 3 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNGTMAC*SCTLEA
Trigger: GGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCC...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTGGATGTGTTAGTGGTTaGGGTGCTTTGCATTTTCCC +
Preference number: 3 (lower is better)
Translates to: QMCNNQRECTTSISLVLSGCVSG*GALHFP
Trigger: GGGAAAATGCAAAGCACCCAAACCACTAACACATCC...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTCATGGCTTGTTTGAGTaGTACCTTGGAAGCCTTTGC +
Preference number: 3 (lower is better)
Translates to: QMCNNQRECTTSISLVLSHGLFE*YLGSLC
Trigger: GCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATG...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTCTGAGCATGAGATCATaGCACAGAGAAGACAGTCCA +
Preference number: 3 (lower is better)
Translates to: QMCNNQRECTTSISLVLSLSMRS*HREDSP
Trigger: TGGACTGTCTTCTCTGTGCAATGATCTCATGCTCAG...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR CAA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCAGAGAGGAAAAATTTTaGCAGCAGGACACAAGGGTT +
Preference number: 3 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCREEKF*QQDTRV
Trigger: AACCCTTGTGTCCTGCTGCAAAAATTTTTCCTCTCT...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR TCA 72 bp TGTTGTTTGTTTGTCATCAAGGAACCATGGCTTGTTTaGGTTGTACCTTGGAAGCCTTTGCTGGAAGAACGA +
Preference number: 3 (lower is better)
Translates to: CCLFVIKEPWLV*VVPWKPLLEER
Trigger: TCGTTCTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGATGACAAACAAACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR GCA 72 bp CAGGTGTGCAATTCATTCATAGTTTTCATCACTGGTTaGCCAGTGATACGGCCTCAGGAAATGTTGAGATTT +
Preference number: 3 (lower is better)
Translates to: QVCNSFIVFITG*PVIRPQEMLRF
Trigger: AAATCTCAACATTTCCTGAGGCCGTATCACTGGGCAACCAGTGATGAAAACTATGAATGAATTGCACACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR CCA 72 bp AACAGATCAACCTTAATAACTACACCTCCTAGTCACTaGAGAGGGCTTTGCAATGAACATGTCACAGCAAGA +
Preference number: 3 (lower is better)
Translates to: NRSTLITTPPSH*RGLCNEHVTAR
Trigger: TCTTGCTGTGACATGTTCATTGCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR CAA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAACTTGATGTTGTTTGTTaGTCATCAAGGAACCATGGC +
Preference number: 3 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQLDVVC*SSRNHG
Trigger: GCCATGGTTCCTTGATGACAAACAAACAACATCAAG...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR-3UTR CAA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAAGATCCAAGCTAGATTaGAAAACTGAGTGCGACATC +
Preference number: 3 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQRSKLD*KTECDI
Trigger: GATGTCGCACTCAGTTTTCAAATCTAGCTTGGATCT...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR TCA 72 bp GCTAAGGGTGTGAAGTCAAGATGGCTTAGAACAAGATaGCTGAGAAAAAGGCTTCCAGTTAGGTCAAGTTTT +
Preference number: 3 (lower is better)
Translates to: AKGVKSRWLRTR*LRKRLPVRSSF
Trigger: AAAACTTGACCTAACTGGAAGCCTTTTTCTCAGTCATCTTGTTCTAAGCCATCTTGACTTCACACCCTTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR CCA 72 bp TGTGTTAAGGCAGTGCTGCTTTTTAGTAGTAAAGACTaGAGACTCTTGACACGTCTAACAAACAAGCTTGTG +
Preference number: 3 (lower is better)
Translates to: CVKAVLLFSSKD*RLLTRLTNKLV
Trigger: CACAAGCTTGTTTGTTAGACGTGTCAAGAGTCTCCAGTCTTTACTACTAAAAAGCAGCACTGCCTTAACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTAGAGAGGAAAAATTTTaGCAGCAGGACACAAGGGTT +
Preference number: 3 (lower is better)
Translates to: QMCNNQRECTTSISLVLSREEKF*QQDTRV
Trigger: AACCCTTGTGTCCTGCTGCAAAAATTTTTCCTCTCT...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR CAA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTACAGAGCCATACACATaGATGCTAAACATAAGAGCT +
Preference number: 3 (lower is better)
Translates to: KNAHPIAHVLPCADLGISTEPYT*MLNIRA
Trigger: AGCTCTTATGTTTAGCATCAATGTGTATGGCTCTGT...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTACAGAGCCATACACATaGATGCTAAACATAAGAGCT +
Preference number: 3 (lower is better)
Translates to: QMCNNQRECTTSISLVLSTEPYT*MLNIRA
Trigger: AGCTCTTATGTTTAGCATCAATGTGTATGGCTCTGT...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTGCCTAGAAACATTCTaGGTTAGTGACAGAAACACT +
Preference number: 3 (lower is better)
Translates to: QMCNNQRECTTSISLVLSCLETF*VSDRNT
Trigger: AGTGTTTCTGTCACTAACCAAGAATGTTTCTAGGCA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTGAATTATACATCTCATaGCACTCAAAGCTGACTACA +
Preference number: 3 (lower is better)
Translates to: QMCNNQRECTTSISLVLSELYIS*HSKLTT
Trigger: TGTAGTCAGCTTTGAGTGCAATGAGATGTATAATTC...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR GCA 72 bp AGTTTACCATTTAGTTTTGACTGTGAAGCAACCAACTaGCTAGAAACATTCTTGGTTAGTGACAGAAACACT +
Preference number: 3 (lower is better)
Translates to: SLPFSFDCEATN*LETFLVSDRNT
Trigger: AGTGTTTCTGTCACTAACCAAGAATGTTTCTAGGCAGTTGGTTGCTTCACAGTCAAAACTAAATGGTAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR-3UTR CAA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACGAATTATACATCTCATaGCACTCAAAGCTGACTACA +
Preference number: 3 (lower is better)
Translates to: LDLKTECDISKPNKDIQNELYIS*HSKLTT
Trigger: TGTAGTCAGCTTTGAGTGCAATGAGATGTATAATTC...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCACGGCGGCCGAAGGGTaGGGGGACGAGGACGCCGAG +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVTAAEG*GDEDAE
Trigger: CTCGGCGTCCTCGTCCCCGCACCCTTCGGCCGCCGT...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
3UTR CAA 72 bp AGGAGTCCCTGCGCAACTGTCCTGAGCATGAGATCATaGCACAGAGAAGACAGTCCACCGCGCAGCGCTGAC +
Preference number: 4 (lower is better)
Translates to: RSPCATVLSMRS*HREDSPPRSAD
Trigger: GTCAGCGCTGCGCGGTGGACTGTCTTCTCTGTGCAATGATCTCATGCTCAGGACAGTTGCGCAGGGACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR CCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCCGAGGCCGAATCGGCTaGATCGGCGGCGGGGACGGC +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCRGRIG*IGGGDG
Trigger: GCCGTCCCCGCCGCCGATCCAGCCGATTCGGCCTCG...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
3UTR CAA 72 bp TTTCCCAACTGCCTGAGAGGACTCCAAGGATACATCTaGCGACCCTACTCGGTTCCCAGTGGACGGACGGCA +
Preference number: 4 (lower is better)
Translates to: FPNCLRGLQGYI*RPYSVPSGRTA
Trigger: TGCCGTCCGTCCACTGGGAACCGAGTAGGGTCGCAAGATGTATCCTTGGAGTCCTCTCAGGCAGTTGGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR GCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTAGGCCGCATGGAGGTTaGCGCCCGCCCCGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISRPHGG*RPPRRE
Trigger: CTCCCTGCGGGGCGGGCGGCAACCTCCATGCGGCCT...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000436909.8
CDS-3UTR GCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTGGCAGGAAGTCCCGCTaGTCCGCGGGCAGCGCGTGG +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISGRKSR*SAGSAW
Trigger: CCACGCGCTGCCCGCGGAGCAGCGGGACTTCCTGCC...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAACGCCCGGCCTCGGCTaGTGCTGCTGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQTPGLG*CCCCRC
Trigger: GCAGCGGCAGCAGCAGCAGCAGCCGAGGCCGGGCGT...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS-3UTR CCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTTGCCGCTCCCGCCGGTaGCCGTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISCRSRR*PCCCCC
Trigger: GCAGCAGCAGCAGCACGGCCACCGGCGGGAGCGGCA...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACGGCAGGAAGTCCCGCTaGTCCGCGGGCAGCGCGTGG +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNGRKSR*SAGSAW
Trigger: CCACGCGCTGCCCGCGGAGCAGCGGGACTTCCTGCC...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACACGGCGGCCGAAGGGTaGGGGGACGAGGACGCCGAG +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNTAAEG*GDEDAE
Trigger: CTCGGCGTCCTCGTCCCCGCACCCTTCGGCCGCCGT...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTGTGGACGAGGCCGCATaGAGGTTGCCGCCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSVDEAA*RLPPAP
Trigger: CGGGGCGGGCGGCAACCTCCATGCGGCCTCGTCCAC...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436909.8
CDS-3UTR CCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTGCCGCTCCCGCCGGTaGCCGTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSCRSRR*PCCCCC
Trigger: GCAGCAGCAGCAGCACGGCCACCGGCGGGAGCGGCA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp AAGGATACATCTTGCGACCCTACTCGGTTCCCAGTGGACGGACGGCAAAGCAGCTCCCTGGGATGTAACTaGAGGAAACTGACTGCCATT +
Preference number: 4 (lower is better)
Translates to: KDTSCDPTRFPVDGRQSSSLGCN*RKLTAI
Trigger: AATGGCAGTCAGTTTCCTTCAGTTACATCCCAGGGA...GCTGCTTTGCCGTCCGTCCACTGGGAACCGAGTAGGGTCGCAAGATGTATCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR TCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCCTATCTACAGAGGTCTaGGAGGGGCGCGTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVLSTEV*EGRVPL
Trigger: AAGAGGGACGCGCCCCTCTCAGACCTCTGTAGATAG...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp AAGGATACATCTTGCGACCCTACTCGGTTCCCAGTGGACGGACGGCAAAGCAGCGCTGTTTCGGGGTTTTaGATGGTGTTGCATCGGAAT +
Preference number: 4 (lower is better)
Translates to: KDTSCDPTRFPVDGRQSSAVSGF*MVLHRN
Trigger: ATTCCGATGCAACACCATGCAAAACCCCGAAACAGC...GCTGCTTTGCCGTCCGTCCACTGGGAACCGAGTAGGGTCGCAAGATGTATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR GCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACTCACTGGGGTCCCCGTaGAAATGGCGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNSLGSP*KWRRRR
Trigger: CCGCCGCCGCCGCCATTTGCACGGGGACCCCAGTGA...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS-3UTR TCA 90 bp AAGGATACATCTTGCGACCCTACTCGGTTCCCAGTGGACGGACGGCAAAGCAGCAAGTCGCTAAGGGTGTaGAGTCAAGATGGCTTAGAA +
Preference number: 4 (lower is better)
Translates to: KDTSCDPTRFPVDGRQSSKSLRV*SQDGLE
Trigger: TTCTAAGCCATCTTGACTTCACACCCTTAGCGACTT...GCTGCTTTGCCGTCCGTCCACTGGGAACCGAGTAGGGTCGCAAGATGTATCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR CCA 90 bp AAGGATACATCTTGCGACCCTACTCGGTTCCCAGTGGACGGACGGCAAAGCAGCATCCAGAAACTACACTaGTCGTCCCTCACTTTTCAC +
Preference number: 4 (lower is better)
Translates to: KDTSCDPTRFPVDGRQSSIQKLH*SSLTFH
Trigger: GTGAAAAGTGAGGGACGACCAGTGTAGTTTCTGGAT...GCTGCTTTGCCGTCCGTCCACTGGGAACCGAGTAGGGTCGCAAGATGTATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR CCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACCGAGGCCGAATCGGCTaGATCGGCGGCGGGGACGGC +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNRGRIG*IGGGDG
Trigger: GCCGTCCCCGCCGCCGATCCAGCCGATTCGGCCTCG...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAACCGAGCCCCTGTCACTaGGGTCCCCGTGCAAATGGC +
Preference number: 4 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQPSPCH*GPRANG
Trigger: GCCATTTGCACGGGGACCCCAGTGACAGGGGCTCGG...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS-3UTR TCA 90 bp AAGGATACATCTTGCGACCCTACTCGGTTCCCAGTGGACGGACGGCAAAGCAGCGGAAAGTTTTCAAGATaGTTCAAACCTCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: KDTSCDPTRFPVDGRQSSGKFSR*FKPPAP
Trigger: AGGTGCTGGAGGTTTGAATCATCTTGAAAACTTTCC...GCTGCTTTGCCGTCCGTCCACTGGGAACCGAGTAGGGTCGCAAGATGTATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR TCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCTCACTGGTTGCCCAGTaGTACGGCCTCAGGAAATGT +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVSLVAQ*YGLRKC
Trigger: ACATTTCCTGAGGCCGTATCACTGGGCAACCAGTGA...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACCGGCTTCCCCGGTGCTaGGCGTGGACGAGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNRLPRC*AWTRPH
Trigger: ATGCGGCCTCGTCCACGCTCAGCACCGGGGAAGCCG...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436909.8
CDS-3UTR TCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAACCGAGCTGCTCTGGCTaGAACCAGGCGATCCTCGGA +
Preference number: 4 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQPSCSG*NQAILG
Trigger: TCCGAGGATCGCCTGGTTTCAGCCAGAGCAGCTCGG...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS-3UTR CCA 90 bp AAGGATACATCTTGCGACCCTACTCGGTTCCCAGTGGACGGACGGCAAAGCAGCGGAGCAGAAAACACATaGAGAGATATAAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: KDTSCDPTRFPVDGRQSSGAENT*RDIRFQ
Trigger: CTGGAACCTTATATCTCTCCATGTGTTTTCTGCTCC...GCTGCTTTGCCGTCCGTCCACTGGGAACCGAGTAGGGTCGCAAGATGTATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR TCA 90 bp CTGAGCATGAGATCATTGCACAGAGAAGACAGTCCACCGCGCAGCGCTGACTATATCTTTGGCCACATATaGACCACCATCCTTTATCCG +
Preference number: 4 (lower is better)
Translates to: LSMRSLHREDSPPRSADYIFGHI*TTILYP
Trigger: CGGATAAAGGATGGTGGTTCATATGTGGCCAAAGAT...ATAGTCAGCGCTGCGCGGTGGACTGTCTTCTCTGTGCAATGATCTCATGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR TCA 90 bp AAGGATACATCTTGCGACCCTACTCGGTTCCCAGTGGACGGACGGCAAAGCAGCGAAATGTCACCAGAGTaGGGGAGAATTTGTAAAATC +
Preference number: 4 (lower is better)
Translates to: KDTSCDPTRFPVDGRQSSEMSPE*GRICKI
Trigger: GATTTTACAAATTCTCCCTCACTCTGGTGACATTTC...GCTGCTTTGCCGTCCGTCCACTGGGAACCGAGTAGGGTCGCAAGATGTATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR TCA 90 bp CTGAGCATGAGATCATTGCACAGAGAAGACAGTCCACCGCGCAGCGCTGACTATGCTAGATTTGAAAACTaGGTGCGACATCTCCAAACC +
Preference number: 4 (lower is better)
Translates to: LSMRSLHREDSPPRSADYARFEN*VRHLQT
Trigger: GGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAGC...ATAGTCAGCGCTGCGCGGTGGACTGTCTTCTCTGTGCAATGATCTCATGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR GCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCAAGGCCTGCTTCACTTaGATGGCCCCATATGAACTC +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVKACFT*MAPYEL
Trigger: GAGTTCATATGGGGCCATGCAAGTGAAGCAGGCCTT...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCCTACTCGGTTCCCAGTaGACGGACGGCAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCLLGSQ*TDGKAA
Trigger: AGCTGCTTTGCCGTCCGTCCACTGGGAACCGAGTAG...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTGCCCAGGCCCCGGGCTaGTGGTGGTTGTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSAQAPG*WWLLLL
Trigger: CAACAACAACAACCACCACCAGCCCGGGGCCTGGGC...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCAAACTTCCAAATATCTaGACGTCAGCGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVKLPNI*TSALGQ
Trigger: CTGGCCCAGCGCTGACGTCCAGATATTTGGAAGTTT...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAAGGTTCCTCAGCCCCTaGGTCGTCTCCCAGATCTGC +
Preference number: 4 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQRFLSP*VVSQIC
Trigger: GCAGATCTGGGAGACGACCCAGGGGCTGAGGAACCT...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS-3UTR TCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCTCCCTGGGATGTAACTaGAGGAAACTGACTGCCATT +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVSLGCN*RKLTAI
Trigger: AATGGCAGTCAGTTTCCTTCAGTTACATCCCAGGGA...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCTTGCATGGCCCCATATaGACTCCTTCCAACATCGTT +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVLHGPI*TPSNIV
Trigger: AACGATGTTGGAAGGAGTTCATATGGGGCCATGCAA...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCCTTGCTGATCCATGCTaGGATTTGTTGGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVLADPC*DLLVLL
Trigger: CAACAGCACCAACAAATCTCAGCATGGATCAGCAAG...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAACTATCTACAGAGGTCTaGGAGGGGCGCGTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQLSTEV*EGRVPL
Trigger: AAGAGGGACGCGCCCCTCTCAGACCTCTGTAGATAG...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCAGTTGTCAGTCTTCATaGTCCATTCTGTGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVSCQSS*SILWRA
Trigger: AGCTCGCCACAGAATGGATCATGAAGACTGACAACT...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCGAGAGGGCTTTGCAATaGACATGTCACAGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVERALQ*TCHSKR
Trigger: TCTCTTGCTGTGACATGTTCATTGCAAAGCCCTCTC...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAGCAGCAGGCTGTAGTTaGGTCCATACGTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQAAGCS*VHTCWP
Trigger: AGGCCAGCACGTATGGACTCAACTACAGCCTGCTGC...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCTTTGATGAGGTCAGCTaGTCTCACGCCATTCTGTAC +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVFDEVS*SHAILY
Trigger: GTACAGAATGGCGTGAGAGCAGCTGACCTCATCAAA...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCGCTGTTTCGGGGTTTTaGATGGTGTTGCATCGGAAT +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVAVSGF*MVLHRN
Trigger: ATTCCGATGCAACACCATGCAAAACCCCGAAACAGC...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTTCTCCCAGGAGTCCCTaGGCAACTGTCCTGAGCATG +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISSPRSP*ATVLSM
Trigger: CATGCTCAGGACAGTTGCGCAGGGACTCCTGGGAGA...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTCCTCTTGTTGCTGCTaGCCGAGGCCGAATCGGCTG +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSSSCCC*PRPNRL
Trigger: CAGCCGATTCGGCCTCGGGCAGCAGCAACAAGAGGA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTCGCGCTTCCTCTTGTTaGTGCTGCCCGAGGCCGAAT +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSRASSC*CCPRPN
Trigger: ATTCGGCCTCGGGCAGCAGCAACAAGAGGAAGCGCG...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAACTACTCGGTTCCCAGTaGACGGACGGCAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQLLGSQ*TDGKAA
Trigger: AGCTGCTTTGCCGTCCGTCCACTGGGAACCGAGTAG...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCCTTGGAAGCCTTTGCTaGAAGAACGAAAGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVLGSLC*KNERAL
Trigger: CAAGGCTCTTTCGTTCTTCCAGCAAAGGCTTCCAAG...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CTGAGCATGAGATCATTGCACAGAGAAGACAGTCCACCGCGCAGCGCTGACTATGATCACTTTCCCCTTTaGAATCTGGACTTCCTATCA +
Preference number: 4 (lower is better)
Translates to: LSMRSLHREDSPPRSADYDHFPL*NLDFLS
Trigger: TGATAGGAAGTCCAGATTCCAAAGGGGAAAGTGATC...ATAGTCAGCGCTGCGCGGTGGACTGTCTTCTCTGTGCAATGATCTCATGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR CCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCTCCTGCACGTCACGGTaGTCATTACTCTTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVSCTSR*SLLFSD
Trigger: GTCAGAAAAGAGTAATGACCACCGTGACGTGCAGGA...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCACACCTCCTAGTCACTaGAGAGGGCTTTGCAATGAA +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVTPPSH*RGLCNE
Trigger: TTCATTGCAAAGCCCTCTCCAGTGACTAGGAGGTGT...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CTGAGCATGAGATCATTGCACAGAGAAGACAGTCCACCGCGCAGCGCTGACTATACTTCACCAAGTTGCTaGCTTTGGAGAATGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LSMRSLHREDSPPRSADYTSPSC*LWRMLF
Trigger: GAAAAGCATTCTCCAAAGCCAGCAACTTGGTGAAGT...ATAGTCAGCGCTGCGCGGTGGACTGTCTTCTCTGTGCAATGATCTCATGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR CCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTGCCCCGGGCTGGTGGTaGTTGTTGTTGTTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISAPGWW*LLLLLV
Trigger: GACCAACAACAACAACAACCACCACCAGCCCGGGGC...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAACAGGCCCCGGGCTGGTaGTGGTTGTTGTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQQAPGW*WLLLLL
Trigger: CAACAACAACAACAACCACCACCAGCCCGGGGCCTG...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCACGAAAGAGCCTTGCTaGTCCATGCTGAGATTTGTT +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVTKEPC*SMLRFV
Trigger: AACAAATCTCAGCATGGATCAGCAAGGCTCTTTCGT...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCAGTAAGATTTTGTGCTaGCACCTCACCAACCCATCA +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVSKILC*HLTNPS
Trigger: TGATGGGTTGGTGAGGTGTCAGCACAAAATCTTACT...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACGCAGCAGGCTGTAGTTaGGTCCATACGTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNAAGCS*VHTCWP
Trigger: AGGCCAGCACGTATGGACTCAACTACAGCCTGCTGC...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCTGTGACAGTGGTGGTTaGAGTAGAGGTTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCCDSGG*SRGSSA
Trigger: GGCTGAGGAACCTCTACTTCAACCACCACTGTCACA...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS-3UTR GCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCAGTTTGTATTGGGGATaGAAGCATCTTCCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVSLYWG*KHLPWD
Trigger: ATCCCAGGGAAGATGCTTGCATCCCCAATACAAACT...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp CTGAGCATGAGATCATTGCACAGAGAAGACAGTCCACCGCGCAGCGCTGACTATAATAACCAAAGGGAATaGACTACATCCATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LSMRSLHREDSPPRSADYNNQRE*TTSISL
Trigger: CAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATT...ATAGTCAGCGCTGCGCGGTGGACTGTCTTCTCTGTGCAATGATCTCATGCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR CCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCCACCATAGTTTGTATTaGGGATGCAAGCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVHHSLY*GCKHLP
Trigger: GGGAAGATGCTTGCATCCCCAATACAAACTATGGTG...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCATCCAGAAACTACACTaGTCGTCCCTCACTTTTCAC +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVIQKLH*SSLTFH
Trigger: GTGAAAAGTGAGGGACGACCAGTGTAGTTTCTGGAT...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACGCCCCGGGCTGGTGGTaGTTGTTGTTGTTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNAPGWW*LLLLLV
Trigger: GACCAACAACAACAACAACCACCACCAGCCCGGGGC...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTCAGGCCCCGGGCTGGTaGTGGTTGTTGTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSQAPGW*WLLLLL
Trigger: CAACAACAACAACAACCACCACCAGCCCGGGGCCTG...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACGCCCAGGCCCCGGGCTaGTGGTGGTTGTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNAQAPG*WWLLLL
Trigger: CAACAACAACAACCACCACCAGCCCGGGGCCTGGGC...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTGCATCCACAGACTGTTaGACGGTCCGAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSASTDC*TVRAAL
Trigger: CAGAGCAGCTCGGACCGTCCAACAGTCTGTGGATGC...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS-3UTR TCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCCAAGCCCCACTGCTTTaGTATCCAATCTCTATATGT +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVQAPLL*YPISIC
Trigger: ACATATAGAGATTGGATATCAAAGCAGTGGGGCTTG...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp TCATCAAGGAACCATGGCTTGTTTGAGTTGTACCTTGGAAGCCTTTGCTGGAAGGAACCATGGCTTGTTTaGGTTGTACCTTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SSRNHGLFELYLGSLCWKEPWLV*VVPWKP
Trigger: AGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTC...CTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR TCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCAAAAAGAATAAGAGATaGGAAACAGGCACACGCAGC +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVKKNKR*ETGTRS
Trigger: GCTGCGTGTGCCTGTTTCTCATCTCTTATTCTTTTT...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAACCACCATGCCCGGCCTaGGCAACTTGTTTACTTCAT +
Preference number: 4 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQPPCPA*ATCLLH
Trigger: ATGAAGTAAACAAGTTGCTCAGGCCGGGCATGGTGG...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAATCACTGGTTGCCCAGTaGTACGGCCTCAGGAAATGT +
Preference number: 4 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQSLVAQ*YGLRKC
Trigger: ACATTTCCTGAGGCCGTATCACTGGGCAACCAGTGA...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCAAGGCCTGCTTCACTTaGATGGCCCCATATGAACTC +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCKACFT*MAPYEL
Trigger: GAGTTCATATGGGGCCATGCAAGTGAAGCAGGCCTT...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCGGTTTTGCATGGTGTTaGATCGGAATCTACATCACT +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVGFAWC*IGIYIT
Trigger: AGTGATGTAGATTCCGATGCAACACCATGCAAAACC...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCTCCAAGGATACATCTTaGGACCCTACTCGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCSKDTS*DPTRFP
Trigger: TGGGAACCGAGTAGGGTCGCAAGATGTATCCTTGGA...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp TCATCAAGGAACCATGGCTTGTTTGAGTTGTACCTTGGAAGCCTTTGCTGGAAGTACCTTGGAAGCCTTTaGTGGAAGAACGAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: SSRNHGLFELYLGSLCWKYLGSL*WKNERA
Trigger: GGCTCTTTCGTTCTTCCAGCAAAGGCTTCCAAGGTA...CTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR GCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACTCCTCTTGTTGCTGCTaGCCGAGGCCGAATCGGCTG +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNSSCCC*PRPNRL
Trigger: CAGCCGATTCGGCCTCGGGCAGCAGCAACAAGAGGA...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCTCACTGATTTCTTCATaGAGACCCACGACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCSLISS*RPTTPW
Trigger: CCAGGGAGTCGTGGGTCTGCATGAAGAAATCAGTGA...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCGATGTGTTAGTGGTTTaGGTGCTTTGCATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVDVLVV*VLCIFP
Trigger: TGGGAAAATGCAAAGCACCCAAACCACTAACACATC...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCGGAGCAGAAAACACATaGAGAGATATAAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVGAENT*RDIRFQ
Trigger: CTGGAACCTTATATCTCTCCATGTGTTTTCTGCTCC...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCACTTCACCAAGTTGCTaGCTTTGGAGAATGCTTTTC +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVTSPSC*LWRMLF
Trigger: GAAAAGCATTCTCCAAAGCCAGCAACTTGGTGAAGT...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACCGGTCCGAGCTGCTCTaGCTGAAACCAGGCGATCCT +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNRSELL*LKPGDP
Trigger: AGGATCGCCTGGTTTCAGCCAGAGCAGCTCGGACCG...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561678.7
3UTR CAA 72 bp CTGAGATTTGTTGGTGCTGTTGGATGTGTTAGTGGTTaGGGTGCTTTGCATTTTCCCAACTGCCTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LRFVGAVGCVSG*GALHFPNCLRG
Trigger: TCCTCTCAGGCAGTTGGGAAAATGCAAAGCACCCAAACCACTAACACATCCAACAGCACCAACAAATCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR CAA 72 bp TGTCATCAAGGAACCATGGCTTGTTTGAGTTGTACCTaGGAAGCCTTTGCTGGAAGAACGAAAGAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: CHQGTMACLSCT*EAFAGRTKEPC
Trigger: GCAAGGCTCTTTCGTTCTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGATGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR TCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCTTGCATGGCCCCATATaGACTCCTTCCAACATCGTT +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCLHGPI*TPSNIV
Trigger: AACGATGTTGGAAGGAGTTCATATGGGGCCATGCAA...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCGTACTTTGCTATTGGTaGTACAGCATGACTCAAAAC +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVVLCYW*YSMTQN
Trigger: GTTTTGAGTCATGCTGTATCACCAATAGCAAAGTAC...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACCTATCTACAGAGGTCTaGGAGGGGCGCGTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNLSTEV*EGRVPL
Trigger: AAGAGGGACGCGCCCCTCTCAGACCTCTGTAGATAG...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTCCACCATGCCCGGCCTaGGCAACTTGTTTACTTCAT +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSPPCPA*ATCLLH
Trigger: ATGAAGTAAACAAGTTGCTCAGGCCGGGCATGGTGG...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCCTAAGAGGCAAGTACTaGACTTCACCAAGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCLRGKY*TSPSCW
Trigger: CCAGCAACTTGGTGAAGTTCAGTACTTGCCTCTTAG...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTCACTGGTTGCCCAGTaGTACGGCCTCAGGAAATGT +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSSLVAQ*YGLRKC
Trigger: ACATTTCCTGAGGCCGTATCACTGGGCAACCAGTGA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp TCATCAAGGAACCATGGCTTGTTTGAGTTGTACCTTGGAAGCCTTTGCTGGAAGAGTTTGTATTGGGGATaGAAGCATCTTCCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SSRNHGLFELYLGSLCWKSLYWG*KHLPWD
Trigger: ATCCCAGGGAAGATGCTTGCATCCCCAATACAAACT...CTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR GCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTAAGGCCTGCTTCACTTaGATGGCCCCATATGAACTC +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISKACFT*MAPYEL
Trigger: GAGTTCATATGGGGCCATGCAAGTGAAGCAGGCCTT...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCTACCTTGGAAGCCTTTaGTGGAAGAACGAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCYLGSL*WKNERA
Trigger: GGCTCTTTCGTTCTTCCAGCAAAGGCTTCCAAGGTA...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCCACTGGAGAGGGCTTTaGAATGAACATGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCHWRGL*NEHVTA
Trigger: TGCTGTGACATGTTCATTGCAAAGCCCTCTCCAGTG...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTGTTTTCATCACTGGTTaGCCAGTGATACGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISVFITG*PVIRPQ
Trigger: CTGAGGCCGTATCACTGGGCAACCAGTGATGAAAAC...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTGTCGTCTCCCAGATCTaGATCCACAGACTGTTGGAC +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSVVSQI*IHRLLD
Trigger: GTCCAACAGTCTGTGGATGCAGATCTGGGAGACGAC...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS-3UTR CCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACCTACTCGGTTCCCAGTaGACGGACGGCAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNLLGSQ*TDGKAA
Trigger: AGCTGCTTTGCCGTCCGTCCACTGGGAACCGAGTAG...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCCATAGTTTTCATCACTaGTTGCCCAGTGATACGGCC +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCHSFHH*LPSDTA
Trigger: GGCCGTATCACTGGGCAACCAGTGATGAAAACTATG...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTGGTTGTTGTTGTTGTTaGTCGTCTCTAGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISGCCCC*SSLGAG
Trigger: TCCTGCCCCTAGAGACGACCAACAACAACAACAACC...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAATTTTCCCAACTGCCTaGGAGGACTCCAAGGATACA +
Preference number: 4 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQIFPTA*EDSKDT
Trigger: TGTATCCTTGGAGTCCTCTCAGGCAGTTGGGAAAAT...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTGAACCATGGCTTGTTTaGGTTGTACCTTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISEPWLV*VVPWKP
Trigger: AGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTC...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTAGTTGTCAGTCTTCATaGTCCATTCTGTGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISSCQSS*SILWRA
Trigger: AGCTCGCCACAGAATGGATCATGAAGACTGACAACT...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCTGTCCATTAATGGTCTaGTTGGTCTTCAGTATTTCA +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVCPLMV*LVFSIS
Trigger: TGAAATACTGAAGACCAATCAGACCATTAATGGACA...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCTTTACACGAGTACTATaGGTTTCCAGTTTTGGAACA +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVFTRVL*VSSFGT
Trigger: TGTTCCAAAACTGGAAACTCATAGTACTCGTGTAAA...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCAGCAAAGGAAGGTTATaGTTCATGGATATGAATGGA +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVSKGRL*FMDMNG
Trigger: TCCATTCATATCCATGAATCATAACCTTCCTTTGCT...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCGAAACCAAGGCAAGATaGACTCTTTTAAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVETKAR*TLLRNF
Trigger: GAAATTCCTTAAAAGAGTTCATCTTGCCTTGGTTTC...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTAAGGTAGCTCAGTGGTaGAGCCACAAAGACGTTAAG +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISKVAQW*SHKDVK
Trigger: CTTAACGTCTTTGTGGCTTCACCACTGAGCTACCTT...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTCTAAGAGGCAAGTACTaGACTTCACCAAGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISLRGKY*TSPSCW
Trigger: CCAGCAACTTGGTGAAGTTCAGTACTTGCCTCTTAG...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCTCATTTCACTCTCTTTaGAAGGCATGGCCTAACCTC +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCSFHSL*KAWPNL
Trigger: GAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGA...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp TCATCAAGGAACCATGGCTTGTTTGAGTTGTACCTTGGAAGCCTTTGCTGGAAGGGTTTTGCATGGTGTTaGATCGGAATCTACATCACT +
Preference number: 4 (lower is better)
Translates to: SSRNHGLFELYLGSLCWKGFAWC*IGIYIT
Trigger: AGTGATGTAGATTCCGATGCAACACCATGCAAAACC...CTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR GCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTCCAAGGATACATCTTaGGACCCTACTCGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSSKDTS*DPTRFP
Trigger: TGGGAACCGAGTAGGGTCGCAAGATGTATCCTTGGA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCCCATGTTTTGCCCTGTaGAGATCTAGGAATATCTGG +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCPCFAL*RSRNIW
Trigger: CCAGATATTCCTAGATCTGCACAGGGCAAAACATGG...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTCACTGGAGAGGGCTTTaGAATGAACATGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISHWRGL*NEHVTA
Trigger: TGCTGTGACATGTTCATTGCAAAGCCCTCTCCAGTG...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACGTTTTCATCACTGGTTaGCCAGTGATACGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNVFITG*PVIRPQ
Trigger: CTGAGGCCGTATCACTGGGCAACCAGTGATGAAAAC...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTCACTGATTTCTTCATaGAGACCCACGACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSSLISS*RPTTPW
Trigger: CCAGGGAGTCGTGGGTCTGCATGAAGAAATCAGTGA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCCACCATAGTTTGTATTaGGGATGCAAGCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCHHSLY*GCKHLP
Trigger: GGGAAGATGCTTGCATCCCCAATACAAACTATGGTG...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACCCTGCTTCACTTGCATaGCCCCATATGAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNPASLA*PHMNSF
Trigger: GAAGGAGTTCATATGGGGCCATGCAAGTGAAGCAGG...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTCCTGCTTCACTTGCATaGCCCCATATGAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSPASLA*PHMNSF
Trigger: GAAGGAGTTCATATGGGGCCATGCAAGTGAAGCAGG...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTCTTGGAAGCCTTTGCTaGAAGAACGAAAGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISLGSLC*KNERAL
Trigger: CAAGGCTCTTTCGTTCTTCCAGCAAAGGCTTCCAAG...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAATCCTGCACGTCACGGTaGTCATTACTCTTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQSCTSR*SLLFSD
Trigger: GTCAGAAAAGAGTAATGACCACCGTGACGTGCAGGA...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTACACCTCCTAGTCACTaGAGAGGGCTTTGCAATGAA +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISTPPSH*RGLCNE
Trigger: TTCATTGCAAAGCCCTCTCCAGTGACTAGGAGGTGT...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCTTAACTCCAAGAATGTaGCTGATAACCCATCATTTC +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVLTPRM*LITHHF
Trigger: GAAATGATGGGTTATCAGCCACATTCTTGGAGTTAA...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAACATAGTTTTCATCACTaGTTGCCCAGTGATACGGCC +
Preference number: 4 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQHSFHH*LPSDTA
Trigger: GGCCGTATCACTGGGCAACCAGTGATGAAAACTATG...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTGGTTGTTGTTGTTGTTaGTCGTCTCTAGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSGCCCC*SSLGAG
Trigger: TCCTGCCCCTAGAGACGACCAACAACAACAACAACC...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACAAACTTCCAAATATCTaGACGTCAGCGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNKLPNI*TSALGQ
Trigger: CTGGCCCAGCGCTGACGTCCAGATATTTGGAAGTTT...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
3UTR CAA 72 bp CCAGGTGTGCAATTCATTCATAGTTTTCATCACTGGTaGCCCAGTGATACGGCCTCAGGAAATGTTGAGATT +
Preference number: 4 (lower is better)
Translates to: PGVQFIHSFHHW*PSDTASGNVEI
Trigger: AATCTCAACATTTCCTGAGGCCGTATCACTGGGCAACCAGTGATGAAAACTATGAATGAATTGCACACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTCCCTGGGATGTAACTaGAGGAAACTGACTGCCATT +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSSLGCN*RKLTAI
Trigger: AATGGCAGTCAGTTTCCTTCAGTTACATCCCAGGGA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTTGCATGGCCCCATATaGACTCCTTCCAACATCGTT +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSLHGPI*TPSNIV
Trigger: AACGATGTTGGAAGGAGTTCATATGGGGCCATGCAA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTATTTTCCCAACTGCCTaGGAGGACTCCAAGGATACA +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSIFPTA*EDSKDT
Trigger: TGTATCCTTGGAGTCCTCTCAGGCAGTTGGGAAAAT...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAACGAAAGAGCCTTGCTaGTCCATGCTGAGATTTGTT +
Preference number: 4 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQTKEPC*SMLRFV
Trigger: AACAAATCTCAGCATGGATCAGCAAGGCTCTTTCGT...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACGAACCATGGCTTGTTTaGGTTGTACCTTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNEPWLV*VVPWKP
Trigger: AGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTC...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCAAAAAGAATAAGAGATaGGAAACAGGCACACGCAGC +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCKKNKR*ETGTRS
Trigger: GCTGCGTGTGCCTGTTTCTCATCTCTTATTCTTTTT...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAGCTAGATTTGAAAACTaGGTGCGACATCTCCAAACC +
Preference number: 4 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQARFEN*VRHLQT
Trigger: GGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAGC...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACGAGAGGGCTTTGCAATaGACATGTCACAGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNERALQ*TCHSKR
Trigger: TCTCTTGCTGTGACATGTTCATTGCAAAGCCCTCTC...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACAAGGTAGCTCAGTGGTaGAGCCACAAAGACGTTAAG +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNKVAQW*SHKDVK
Trigger: CTTAACGTCTTTGTGGCTTCACCACTGAGCTACCTT...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTCTAAGAGGCAAGTACTaGACTTCACCAAGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSLRGKY*TSPSCW
Trigger: CCAGCAACTTGGTGAAGTTCAGTACTTGCCTCTTAG...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTTCATTTCACTCTCTTTaGAAGGCATGGCCTAACCTC +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISSFHSL*KAWPNL
Trigger: GAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGA...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACCACCGAATCCTCATCTaGGACTTTGTGTTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNHRILI*DFVFPK
Trigger: CTTCGGAAACACAAAGTCGCAGATGAGGATTCGGTG...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCAAAATATCTTACCATTaGATGAAGGCTCAGGTCTAT +
Preference number: 4 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVKISYH*MKAQVY
Trigger: ATAGACCTGAGCCTTCATGCAATGGTAAGATATTTT...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR GCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCGGTTTTGCATGGTGTTaGATCGGAATCTACATCACT +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCGFAWC*IGIYIT
Trigger: AGTGATGTAGATTCCGATGCAACACCATGCAAAACC...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTACCTTGGAAGCCTTTaGTGGAAGAACGAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSYLGSL*WKNERA
Trigger: GGCTCTTTCGTTCTTCCAGCAAAGGCTTCCAAGGTA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCGTACACATACATGACTaGCTGAGAAATGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCVHIHD*LRNVTR
Trigger: TCTGGTGACATTTCTCAGGCAGTCATGTATGTGTAC...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACCACTGGAGAGGGCTTTaGAATGAACATGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNHWRGL*NEHVTA
Trigger: TGCTGTGACATGTTCATTGCAAAGCCCTCTCCAGTG...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTTTTCGGGGTTTTGCATaGTGTTGCATCGGAATCTAC +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISFRGFA*CCIGIY
Trigger: GTAGATTCCGATGCAACACCATGCAAAACCCCGAAA...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTACACCTCCTAGTCACTaGAGAGGGCTTTGCAATGAA +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSTPPSH*RGLCNE
Trigger: TTCATTGCAAAGCCCTCTCCAGTGACTAGGAGGTGT...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR CAA 72 bp GTTTGTTTGTCATCAAGGAACCATGGCTTGTTTGAGTaGTACCTTGGAAGCCTTTGCTGGAAGAACGAAAGA +
Preference number: 4 (lower is better)
Translates to: VCLSSRNHGLFE*YLGSLCWKNER
Trigger: TCTTTCGTTCTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGATGACAAACAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR CAA 72 bp ATGTTGTTTGTTTGTCATCAAGGAACCATGGCTTGTTaGAGTTGTACCTTGGAAGCCTTTGCTGGAAGAACG +
Preference number: 4 (lower is better)
Translates to: MLFVCHQGTMAC*SCTLEAFAGRT
Trigger: CGTTCTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGATGACAAACAAACAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
3UTR CAA 72 bp CTTGATGTTGTTTGTTTGTCATCAAGGAACCATGGCTaGTTTGAGTTGTACCTTGGAAGCCTTTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LDVVCLSSRNHG*FELYLGSLCWK
Trigger: CTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGATGACAAACAAACAACATCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR TCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACATCTTTGGCCACATATaGACCACCATCCTTTATCCG +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNIFGHI*TTILYP
Trigger: CGGATAAAGGATGGTGGTTCATATGTGGCCAAAGAT...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCGTACTTTGCTATTGGTaGTACAGCATGACTCAAAAC +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCVLCYW*YSMTQN
Trigger: GTTTTGAGTCATGCTGTATCACCAATAGCAAAGTAC...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCTATCTTACCATTGCATaGAGGCTCAGGTCTATTCTT +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCYLTIA*RLRSIL
Trigger: AAGAATAGACCTGAGCCTTCATGCAATGGTAAGATA...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR TCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACACGAAAGAGCCTTGCTaGTCCATGCTGAGATTTGTT +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNTKEPC*SMLRFV
Trigger: AACAAATCTCAGCATGGATCAGCAAGGCTCTTTCGT...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp TCATCAAGGAACCATGGCTTGTTTGAGTTGTACCTTGGAAGCCTTTGCTGGAAGTTTACACGAGTACTATaGGTTTCCAGTTTTGGAACA +
Preference number: 4 (lower is better)
Translates to: SSRNHGLFELYLGSLCWKFTRVL*VSSFGT
Trigger: TGTTCCAAAACTGGAAACTCATAGTACTCGTGTAAA...CTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR TCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACAGTAAGATTTTGTGCTaGCACCTCACCAACCCATCA +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNSKILC*HLTNPS
Trigger: TGATGGGTTGGTGAGGTGTCAGCACAAAATCTTACT...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACGCTAGATTTGAAAACTaGGTGCGACATCTCCAAACC +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNARFEN*VRHLQT
Trigger: GGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAGC...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTCATTTCACTCTCTTTaGAAGGCATGGCCTAACCTC +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSSFHSL*KAWPNL
Trigger: GAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAGGAAAGTTTTCAAGATaGTTCAAACCTCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQGKFSR*FKPPAP
Trigger: AGGTGCTGGAGGTTTGAATCATCTTGAAAACTTTCC...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACAGTTTGTATTGGGGATaGAAGCATCTTCCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNSLYWG*KHLPWD
Trigger: ATCCCAGGGAAGATGCTTGCATCCCCAATACAAACT...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAGTACACATACATGACTaGCTGAGAAATGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQVHIHD*LRNVTR
Trigger: TCTGGTGACATTTCTCAGGCAGTCATGTATGTGTAC...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTCCATGTTTTGCCCTGTaGAGATCTAGGAATATCTGG +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSPCFAL*RSRNIW
Trigger: CCAGATATTCCTAGATCTGCACAGGGCAAAACATGG...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCAATAACCAAAGGGAATaGACTACATCCATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCNNQRE*TTSISL
Trigger: CAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATT...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACGTTTTCATCACTGGTTaGCCAGTGATACGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNVFITG*PVIRPQ
Trigger: CTGAGGCCGTATCACTGGGCAACCAGTGATGAAAAC...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACCACCATAGTTTGTATTaGGGATGCAAGCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNHHSLY*GCKHLP
Trigger: GGGAAGATGCTTGCATCCCCAATACAAACTATGGTG...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCTCTGTACTTCATCTTTaGCCACATATGAACCACCAT +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCSVLHL*PHMNHH
Trigger: ATGGTGGTTCATATGTGGCCAAAGATGAAGTACAGA...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACCCTGCTTCACTTGCATaGCCCCATATGAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNPASLA*PHMNSF
Trigger: GAAGGAGTTCATATGGGGCCATGCAAGTGAAGCAGG...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACTTTCGGGGTTTTGCATaGTGTTGCATCGGAATCTAC +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNFRGFA*CCIGIY
Trigger: GTAGATTCCGATGCAACACCATGCAAAACCCCGAAA...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAGATGTGTTAGTGGTTTaGGTGCTTTGCATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQDVLVV*VLCIFP
Trigger: TGGGAAAATGCAAAGCACCCAAACCACTAACACATC...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAGGAGCAGAAAACACATaGAGAGATATAAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQGAENT*RDIRFQ
Trigger: CTGGAACCTTATATCTCTCCATGTGTTTTCTGCTCC...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCAATGTTTTGACAAGATaGCAGGTAGCTAGAGTCTTG +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCNVLTR*QVARVL
Trigger: CAAGACTCTAGCTACCTGCCATCTTGTCAAAACATT...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTCCAAGTTGCTGGCTTTaGAGAATGCTTTTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSPSCWL*RMLFQV
Trigger: GACTTGGAAAAGCATTCTCCAAAGCCAGCAACTTGG...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTATCCAGAAACTACACTaGTCGTCCCTCACTTTTCAC +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSIQKLH*SSLTFH
Trigger: GTGAAAAGTGAGGGACGACCAGTGTAGTTTCTGGAT...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR CAA 72 bp AAGACAATTAAAAATGCTCACCCTATAGCCCATGTTTaGCCCTGTGCAGATCTAGGAATATCTGGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: KTIKNAHPIAHV*PCADLGISGAK
Trigger: TTTGGCTCCAGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTTAATTGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTCAAGCCCCACTGCTTTaGTATCCAATCTCTATATGT +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSQAPLL*YPISIC
Trigger: ACATATAGAGATTGGATATCAAAGCAGTGGGGCTTG...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACATTTTCCCAACTGCCTaGGAGGACTCCAAGGATACA +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNIFPTA*EDSKDT
Trigger: TGTATCCTTGGAGTCCTCTCAGGCAGTTGGGAAAAT...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTAAAAAGAATAAGAGATaGGAAACAGGCACACGCAGC +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSKKNKR*ETGTRS
Trigger: GCTGCGTGTGCCTGTTTCTCATCTCTTATTCTTTTT...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCAGCAAAGGAAGGTTATaGTTCATGGATATGAATGGA +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCSKGRL*FMDMNG
Trigger: TCCATTCATATCCATGAATCATAACCTTCCTTTGCT...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACAAGGTAGCTCAGTGGTaGAGCCACAAAGACGTTAAG +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNKVAQW*SHKDVK
Trigger: CTTAACGTCTTTGTGGCTTCACCACTGAGCTACCTT...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTGGAAAGTTTTCAAGATaGTTCAAACCTCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSGKFSR*FKPPAP
Trigger: AGGTGCTGGAGGTTTGAATCATCTTGAAAACTTTCC...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACCACCGAATCCTCATCTaGGACTTTGTGTTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNHRILI*DFVFPK
Trigger: CTTCGGAAACACAAAGTCGCAGATGAGGATTCGGTG...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACTTTGATGAGGTCAGCTaGTCTCACGCCATTCTGTAC +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNFDEVS*SHAILY
Trigger: GTACAGAATGGCGTGAGAGCAGCTGACCTCATCAAA...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACGCTGTTTCGGGGTTTTaGATGGTGTTGCATCGGAAT +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNAVSGF*MVLHRN
Trigger: ATTCCGATGCAACACCATGCAAAACCCCGAAACAGC...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACACAGCAAGAGAATCCTaGACGTCACGGTGGTCATTA +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNTARES*TSRWSL
Trigger: TAATGACCACCGTGACGTGCAGGATTCTCTTGCTGT...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCGTGTTAAGGCAGTGCTaGTTTTTAGTAGTAAAGACT +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCVLRQC*FLVVKT
Trigger: AGTCTTTACTACTAAAAAGCAGCACTGCCTTAACAC...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCTCCAATCTCTATATGTaGCAACTTCATCTGTTACTC +
Preference number: 4 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCSNLYM*QLHLLL
Trigger: GAGTAACAGATGAAGTTGCCACATATAGAGATTGGA...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACGATGTGTTAGTGGTTTaGGTGCTTTGCATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNDVLVV*VLCIFP
Trigger: TGGGAAAATGCAAAGCACCCAAACCACTAACACATC...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACCTTGGAAGCCTTTGCTaGAAGAACGAAAGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNLGSLC*KNERAL
Trigger: CAAGGCTCTTTCGTTCTTCCAGCAAAGGCTTCCAAG...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACGATCACTTTCCCCTTTaGAATCTGGACTTCCTATCA +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNDHFPL*NLDFLS
Trigger: TGATAGGAAGTCCAGATTCCAAAGGGGAAAGTGATC...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTATCTCGTCTCAGAAATaGCTGCATTTAACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSISSQK*LHLTEP
Trigger: TGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTAATGTTTTGACAAGATaGCAGGTAGCTAGAGTCTTG +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISNVLTR*QVARVL
Trigger: CAAGACTCTAGCTACCTGCCATCTTGTCAAAACATT...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACACTTCACCAAGTTGCTaGCTTTGGAGAATGCTTTTC +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNTSPSC*LWRMLF
Trigger: GAAAAGCATTCTCCAAAGCCAGCAACTTGGTGAAGT...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACGTACTTTGCTATTGGTaGTACAGCATGACTCAAAAC +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNVLCYW*YSMTQN
Trigger: GTTTTGAGTCATGCTGTATCACCAATAGCAAAGTAC...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTTTTACACGAGTACTATaGGTTTCCAGTTTTGGAACA +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISFTRVL*VSSFGT
Trigger: TGTTCCAAAACTGGAAACTCATAGTACTCGTGTAAA...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACGAAATGTCACCAGAGTaGGGGAGAATTTGTAAAATC +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNEMSPE*GRICKI
Trigger: GATTTTACAAATTCTCCCTCACTCTGGTGACATTTC...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTGAAACCAAGGCAAGATaGACTCTTTTAAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISETKAR*TLLRNF
Trigger: GAAATTCCTTAAAAGAGTTCATCTTGCCTTGGTTTC...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACAAGTCGCTAAGGGTGTaGAGTCAAGATGGCTTAGAA +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNKSLRV*SQDGLE
Trigger: TTCTAAGCCATCTTGACTTCACACCCTTAGCGACTT...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACTTCTTCAAGCCCCACTaGTTTGATATCCAATCTCTA +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNFFKPH*FDIQSL
Trigger: TAGAGATTGGATATCAAAGCAGTGGGGCTTGAAGAA...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTTCTTCAAGCCCCACTaGTTTGATATCCAATCTCTA +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSFFKPH*FDIQSL
Trigger: TAGAGATTGGATATCAAAGCAGTGGGGCTTGAAGAA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACTTAGAGAAGCCAGCATaGAAAGTCTGTGGAACTCGA +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNLEKPA*KVCGTR
Trigger: TCGAGTTCCACAGACTTTGCATGCTGGCTTCTCTAA...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACCCATGTTTTGCCCTGTaGAGATCTAGGAATATCTGG +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNPCFAL*RSRNIW
Trigger: CCAGATATTCCTAGATCTGCACAGGGCAAAACATGG...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTTGTGTGTTAAGGCAGTaGTGCTTTTTAGTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISCVLRQ*CFLVVK
Trigger: CTTTACTACTAAAAAGCAGCACTGCCTTAACACACA...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACTCTGTACTTCATCTTTaGCCACATATGAACCACCAT +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNSVLHL*PHMNHH
Trigger: ATGGTGGTTCATATGTGGCCAAAGATGAAGTACAGA...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACTTTCGGGGTTTTGCATaGTGTTGCATCGGAATCTAC +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNFRGFA*CCIGIY
Trigger: GTAGATTCCGATGCAACACCATGCAAAACCCCGAAA...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAATCAACTGTTGAAGACTaGAGGGCAATTACTTGTAAA +
Preference number: 4 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQSTVED*RAITCK
Trigger: TTTACAAGTAATTGCCCTCCAGTCTTCAACAGTTGA...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACCCAAGTTGCTGGCTTTaGAGAATGCTTTTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNPSCWL*RMLFQV
Trigger: GACTTGGAAAAGCATTCTCCAAAGCCAGCAACTTGG...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAATTAACTCCAAGAATGTaGCTGATAACCCATCATTTC +
Preference number: 4 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQLTPRM*LITHHF
Trigger: GAAATGATGGGTTATCAGCCACATTCTTGGAGTTAA...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTTTTAGTAGTAAAGACTaGAGACTCTTGACACGTCTA +
Preference number: 4 (lower is better)
Translates to: KNAHPIAHVLPCADLGISFSSKD*RLLTRL
Trigger: TAGACGTGTCAAGAGTCTCCAGTCTTTACTACTAAA...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTCTCCTCCTCAGGTCTTaGAGACATGTATTCATAAAA +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSLLLRS*RHVFIK
Trigger: TTTTATGAATACATGTCTCCAAGACCTGAGGAGGAG...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACCAAGCCCCACTGCTTTaGTATCCAATCTCTATATGT +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNQAPLL*YPISIC
Trigger: ACATATAGAGATTGGATATCAAAGCAGTGGGGCTTG...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACTGTCCATTAATGGTCTaGTTGGTCTTCAGTATTTCA +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNCPLMV*LVFSIS
Trigger: TGAAATACTGAAGACCAATCAGACCATTAATGGACA...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACTGTGTGTTAAGGCAGTaGTGCTTTTTAGTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNCVLRQ*CFLVVK
Trigger: CTTTACTACTAAAAAGCAGCACTGCCTTAACACACA...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTCCAATCTCTATATGTaGCAACTTCATCTGTTACTC +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSSNLYM*QLHLLL
Trigger: GAGTAACAGATGAAGTTGCCACATATAGAGATTGGA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACGATCACTTTCCCCTTTaGAATCTGGACTTCCTATCA +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNDHFPL*NLDFLS
Trigger: TGATAGGAAGTCCAGATTCCAAAGGGGAAAGTGATC...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACTCAACTGTTGAAGACTaGAGGGCAATTACTTGTAAA +
Preference number: 4 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNSTVED*RAITCK
Trigger: TTTACAAGTAATTGCCCTCCAGTCTTCAACAGTTGA...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTTTAGTAGTAAAGACTaGAGACTCTTGACACGTCTA +
Preference number: 4 (lower is better)
Translates to: QMCNNQRECTTSISLVLSFSSKD*RLLTRL
Trigger: TAGACGTGTCAAGAGTCTCCAGTCTTTACTACTAAA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR CAA 72 bp TCTCAGAAATGGCTGCATTTAACAGAGCCATACACATaGATGCTAAACATAAGAGCTTTCACCCTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: SQKWLHLTEPYT*MLNIRAFTLKE
Trigger: TTCTTTCAGGGTGAAAGCTCTTATGTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACAGAAGAGGACGACACTaGACCAAGGAAAATATCTTA +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNRRGRH*TKENIL
Trigger: TAAGATATTTTCCTTGGTCCAGTGTCGTCCTCTTCT...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR CCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACCTCCTCCTCAGGTCTTaGAGACATGTATTCATAAAA +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNLLLRS*RHVFIK
Trigger: TTTTATGAATACATGTCTCCAAGACCTGAGGAGGAG...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
3UTR CAA 72 bp GCAGTGCTGCTTTTTAGTAGTAAAGACTGGAGACTCTaGACACGTCTAACAAACAAGCTTGTGATTTATTTT +
Preference number: 4 (lower is better)
Translates to: AVLLFSSKDWRL*TRLTNKLVIYF
Trigger: AAAATAAATCACAAGCTTGTTTGTTAGACGTGTCAAGAGTCTCCAGTCTTTACTACTAAAAAGCAGCACTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR TCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACGAAACCAAGGCAAGATaGACTCTTTTAAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNETKAR*TLLRNF
Trigger: GAAATTCCTTAAAAGAGTTCATCTTGCCTTGGTTTC...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACGTGTTAAGGCAGTGCTaGTTTTTAGTAGTAAAGACT +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNVLRQC*FLVVKT
Trigger: AGTCTTTACTACTAAAAAGCAGCACTGCCTTAACAC...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACTGTGTGTTAAGGCAGTaGTGCTTTTTAGTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNCVLRQ*CFLVVK
Trigger: CTTTACTACTAAAAAGCAGCACTGCCTTAACACACA...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACTCCAATCTCTATATGTaGCAACTTCATCTGTTACTC +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNSNLYM*QLHLLL
Trigger: GAGTAACAGATGAAGTTGCCACATATAGAGATTGGA...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR GCA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACTCATTAAGGTCCCTCTaGAATAGGAATTGTTTCAAT +
Preference number: 4 (lower is better)
Translates to: LDLKTECDISKPNKDIQNSLRSL*NRNCFN
Trigger: ATTGAAACAATTCCTATTGCAGAGGGACCTTAATGA...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
3UTR CAA 72 bp AATACTGATTATTGGATTTGCCTTGATGTTGTTTGTTaGTCATCAAGGAACCATGGCTTGTTTGAGTTGTAC +
Preference number: 4 (lower is better)
Translates to: NTDYWICLDVVC*SSRNHGLFELY
Trigger: GTACAACTCAAACAAGCCATGGTTCCTTGATGACAAACAAACAACATCAAGGCAAATCCAATAATCAGTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS TCA 90 bp TGCCGCCGCCGCCGCTCGCGCCGCCGCTGGGCGTCCGGGAGCTTCTaGGGCGCGCGCGGCTTCTCCGCCTCGGCTTCCCCGGTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: CRRRRSRRRWASGSF*GARGFSASASPVLS
Trigger: GCTCAGCACCGGGGAAGCCGAGGCGGAGAAGCCGCGCGCGCCTCAGAAGCTCCCGGACGCCCAGCGGCGGCGCGAGCGGCGGCGGCGGCA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436909.8
CDS GCA 90 bp GGCCTCGGCTGCTGCTGCTGCTGCCGCTGCTGCCGCTGCTGCTGCTaGTGCTGCTCGGGGCCCGCCGCGGGCGGCGCGGTCGCGCAGGGA +
Preference number: 5 (lower is better)
Translates to: GLGCCCCCRCCRCCC*CCSGPAAGGAVAQG
Trigger: TCCCTGCGCGACCGCGCCGCCCGCGGCGGGCCCCGAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCGGCAGCAGCAGCAGCAGCCGAGGCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS GCA 90 bp CTCAGGCGCACGCCCGGCCTCGGCTGCTGCTGCTGCTGCCGCTGCTaGCGCTGCTGCTGCTGCTGCTGCTCGGGGCCCGCCGCGGGCGGC +
Preference number: 5 (lower is better)
Translates to: LRRTPGLGCCCCCRC*RCCCCCCSGPAAGG
Trigger: GCCGCCCGCGGCGGGCCCCGAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCGGCAGCAGCAGCAGCAGCCGAGGCCGGGCGTGCGCCTGAG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS GCA 90 bp CGCCTCAGGCGCACGCCCGGCCTCGGCTGCTGCTGCTGCTGCCGCTaGTGCCGCTGCTGCTGCTGCTGCTGCTCGGGGCCCGCCGCGGGC +
Preference number: 5 (lower is better)
Translates to: RLRRTPGLGCCCCCR*CRCCCCCCSGPAAG
Trigger: GCCCGCGGCGGGCCCCGAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCGGCAGCAGCAGCAGCAGCCGAGGCCGGGCGTGCGCCTGAGGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS GCA 90 bp CGCCGCCGCCTCAGGCGCACGCCCGGCCTCGGCTGCTGCTGCTGCTaGCGCTGCTGCCGCTGCTGCTGCTGCTGCTGCTCGGGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: RRRLRRTPGLGCCCC*RCCRCCCCCCSGPA
Trigger: GGCGGGCCCCGAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCGGCAGCAGCAGCAGCAGCCGAGGCCGGGCGTGCGCCTGAGGCGGCGGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS GCA 90 bp GCTGAAACCAGGCGATCCTCGGATCCATCAAACGGCGGCGGCCGCTaGCCCCGCCCCTCCCGGCCGCCCGCAGGGCCGCCGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: AETRRSSDPSNGGGR*PRPSRPPAGPPPPP
Trigger: CGGCGGCGGCGGCGGCCCTGCGGGCGGCCGGGAGGGGCGGGGGCAGCGGCCGCCGCCGTTTGATGGATCCGAGGATCGCCTGGTTTCAGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS CCA 90 bp GTCGTCTCTAGGGGCAGGAAGTCCCGCTGCTCCGCGGGCAGCGCGTaGCTGCCCAGCAGGCGCTCCCCGGAGCGATACATGCCGGCCGGG +
Preference number: 5 (lower is better)
Translates to: VVSRGRKSRCSAGSA*LPSRRSPERYMPAG
Trigger: CCCGGCCGGCATGTATCGCTCCGGGGAGCGCCTGCTGGGCAGCCACGCGCTGCCCGCGGAGCAGCGGGACTTCCTGCCCCTAGAGACGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS CCA 90 bp GTTGTCGCGCTTCCTCTTGTTGCTGCTGCCCGAGGCCGAATCGGCTaGATCGGCGGCGGGGACGGCGGCCGAAGGGTGCGGGGACGAGGA +
Preference number: 5 (lower is better)
Translates to: VVALPLVAAARGRIG*IGGGDGGRRVRGRG
Trigger: TCCTCGTCCCCGCACCCTTCGGCCGCCGTCCCCGCCGCCGATCCAGCCGATTCGGCCTCGGGCAGCAGCAACAAGAGGAAGCGCGACAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS TCA 90 bp TGCCGCCGCCGCCGCTCGCGCCGCCGCTGCTGTGACAGTGGTGGTTaGAGTAGAGGTTCCTCAGCCCCTGGGTCGTCTCCCAGATCTGCA +
Preference number: 5 (lower is better)
Translates to: CRRRRSRRRCCDSGG*SRGSSAPGSSPRSA
Trigger: TGCAGATCTGGGAGACGACCCAGGGGCTGAGGAACCTCTACTTCAACCACCACTGTCACAGCAGCGGCGGCGCGAGCGGCGGCGGCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS GCA 90 bp TGGTTGTTGTTGTTGTTGGTCGTCTCTAGGGGCAGGAAGTCCCGCTaGTCCGCGGGCAGCGCGTGGCTGCCCAGCAGGCGCTCCCCGGAG +
Preference number: 5 (lower is better)
Translates to: WLLLLLVVSRGRKSR*SAGSAWLPSRRSPE
Trigger: CTCCGGGGAGCGCCTGCTGGGCAGCCACGCGCTGCCCGCGGAGCAGCGGGACTTCCTGCCCCTAGAGACGACCAACAACAACAACAACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCGAGGCCGCATGGAGGTaGCCGCCCGCCCCGCAGGGA +
Preference number: 5 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVEAAWR*PPAPQG
Trigger: TCCCTGCGGGGCGGGCGGCAACCTCCATGCGGCCTC...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436909.8
CDS-3UTR CAA 90 bp CTGAGCATGAGATCATTGCACAGAGAAGACAGTCCACCGCGCAGCGCTGACTATAGGGGCGCGTCCCTCTaGTGTTTCCTCTTTTTGCCA +
Preference number: 5 (lower is better)
Translates to: LSMRSLHREDSPPRSADYRGASL*CFLFLP
Trigger: TGGCAAAAAGAGGAAACACAAGAGGGACGCGCCCCT...ATAGTCAGCGCTGCGCGGTGGACTGTCTTCTCTGTGCAATGATCTCATGCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR CAA 90 bp AAGGATACATCTTGCGACCCTACTCGGTTCCCAGTGGACGGACGGCAAAGCAGCGGATGTGTTAGTGGTTaGGGTGCTTTGCATTTTCCC +
Preference number: 5 (lower is better)
Translates to: KDTSCDPTRFPVDGRQSSGCVSG*GALHFP
Trigger: GGGAAAATGCAAAGCACCCAAACCACTAACACATCC...GCTGCTTTGCCGTCCGTCCACTGGGAACCGAGTAGGGTCGCAAGATGTATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR CAA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCCTCCAAGGATACATCTaGCGACCCTACTCGGTTCCC +
Preference number: 5 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVLQGYI*RPYSVP
Trigger: GGGAACCGAGTAGGGTCGCAAGATGTATCCTTGGAG...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCAGGGGCGCGTCCCTCTaGTGTTTCCTCTTTTTGCCA +
Preference number: 5 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVRGASL*CFLFLP
Trigger: TGGCAAAAAGAGGAAACACAAGAGGGACGCGCCCCT...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CTGAGCATGAGATCATTGCACAGAGAAGACAGTCCACCGCGCAGCGCTGACTATTCCTCATCTGCGACTTaGTGTTTCCGAAGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: LSMRSLHREDSPPRSADYSSSAT*CFRRAS
Trigger: AGAAGCTCTTCGGAAACACAAAGTCGCAGATGAGGA...ATAGTCAGCGCTGCGCGGTGGACTGTCTTCTCTGTGCAATGATCTCATGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR CAA 90 bp AAGGATACATCTTGCGACCCTACTCGGTTCCCAGTGGACGGACGGCAAAGCAGCAGAGAGGAAAAATTTTaGCAGCAGGACACAAGGGTT +
Preference number: 5 (lower is better)
Translates to: KDTSCDPTRFPVDGRQSSREEKF*QQDTRV
Trigger: AACCCTTGTGTCCTGCTGCAAAAATTTTTCCTCTCT...GCTGCTTTGCCGTCCGTCCACTGGGAACCGAGTAGGGTCGCAAGATGTATCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR CAA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCCAGGTAGCTAGAGTCTaGAGGGTCAGAAACCAAGGC +
Preference number: 5 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVQVARV*RVRNQG
Trigger: GCCTTGGTTTCTGACCCTCAAGACTCTAGCTACCTG...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp AAGGATACATCTTGCGACCCTACTCGGTTCCCAGTGGACGGACGGCAAAGCAGCGAAAATATCTTACCATaGCATGAAGGCTCAGGTCTA +
Preference number: 5 (lower is better)
Translates to: KDTSCDPTRFPVDGRQSSENILP*HEGSGL
Trigger: TAGACCTGAGCCTTCATGCAATGGTAAGATATTTTC...GCTGCTTTGCCGTCCGTCCACTGGGAACCGAGTAGGGTCGCAAGATGTATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR CAA 90 bp CTGAGCATGAGATCATTGCACAGAGAAGACAGTCCACCGCGCAGCGCTGACTATACCAAGTTGCTGGCTTaGGAGAATGCTTTTCCAAGT +
Preference number: 5 (lower is better)
Translates to: LSMRSLHREDSPPRSADYTKLLA*ENAFPS
Trigger: ACTTGGAAAAGCATTCTCCAAAGCCAGCAACTTGGT...ATAGTCAGCGCTGCGCGGTGGACTGTCTTCTCTGTGCAATGATCTCATGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR CAA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCAGTTTTCATCACTGGTaGCCCAGTGATACGGCCTCA +
Preference number: 5 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVSFHHW*PSDTAS
Trigger: TGAGGCCGTATCACTGGGCAACCAGTGATGAAAACT...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCTGGTGGTGGTTGTTGTaGTTGTTGGTCGTCTCTAGG +
Preference number: 5 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVWWWLL*LLVVSR
Trigger: CCTAGAGACGACCAACAACAACAACAACCACCACCA...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACTCGCGCTTCCTCTTGTaGCTGCTGCCCGAGGCCGAA +
Preference number: 5 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNSRFLL*LLPEAE
Trigger: TTCGGCCTCGGGCAGCAGCAACAAGAGGAAGCGCGA...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCCCATACGTGCTGGCCTaGTTGTCGCGCTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCPYVLA*LSRFLL
Trigger: CAAGAGGAAGCGCGACAACAAGGCCAGCACGTATGG...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCGGGTTTTGCATGGTGTaGCATCGGAATCTACATCAC +
Preference number: 5 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVGFCMV*HRNLHH
Trigger: GTGATGTAGATTCCGATGCAACACCATGCAAAACCC...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTCCGGGCTGGTGGTGGTaGTTGTTGTTGTTGGTCGTC +
Preference number: 5 (lower is better)
Translates to: KNAHPIAHVLPCADLGISPGWWW*LLLLVV
Trigger: GACGACCAACAACAACAACAACCACCACCAGCCCGG...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCTACGTGCTGGCCTTGTaGTCGCGCTTCCTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCYVLAL*SRFLLL
Trigger: CAACAAGAGGAAGCGCGACAACAAGGCCAGCACGTA...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAATGCATCCACAGACTGTaGGACGGTCCGAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQCIHRL*DGPSCS
Trigger: AGAGCAGCTCGGACCGTCCAACAGTCTGTGGATGCA...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS-3UTR CAA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTCTCCAAGGATACATCTaGCGACCCTACTCGGTTCCC +
Preference number: 5 (lower is better)
Translates to: KNAHPIAHVLPCADLGISLQGYI*RPYSVP
Trigger: GGGAACCGAGTAGGGTCGCAAGATGTATCCTTGGAG...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCACCAAGTTGCTGGCTTaGGAGAATGCTTTTCCAAGT +
Preference number: 5 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVTKLLA*ENAFPS
Trigger: ACTTGGAAAAGCATTCTCCAAAGCCAGCAACTTGGT...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCGGCTGGTGGTGGTTGTaGTTGTTGTTGGTCGTCTCT +
Preference number: 5 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCGWWWL*LLLVVS
Trigger: AGAGACGACCAACAACAACAACAACCACCACCAGCC...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAATACGTGCTGGCCTTGTaGTCGCGCTTCCTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQYVLAL*SRFLLL
Trigger: CAACAAGAGGAAGCGCGACAACAAGGCCAGCACGTA...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCAGAGAACACCATAGTTaGTATTGGGGATGCAAGCAT +
Preference number: 5 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVREHHS*YWGCKH
Trigger: ATGCTTGCATCCCCAATACAAACTATGGTGTTCTCT...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCTTCTGTACTTCATCTTaGGCCACATATGAACCACCA +
Preference number: 5 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVFCTSS*ATYEPP
Trigger: TGGTGGTTCATATGTGGCCAAAGATGAAGTACAGAA...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp TCATCAAGGAACCATGGCTTGTTTGAGTTGTACCTTGGAAGCCTTTGCTGGAAGGGGTTTTGCATGGTGTaGCATCGGAATCTACATCAC +
Preference number: 5 (lower is better)
Translates to: SSRNHGLFELYLGSLCWKGFCMV*HRNLHH
Trigger: GTGATGTAGATTCCGATGCAACACCATGCAAAACCC...CTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR CAA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCAGTGGTTTGGGTGCTTaGCATTTTCCCAACTGCCTG +
Preference number: 5 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCSGLGA*HFPNCL
Trigger: CAGGCAGTTGGGAAAATGCAAAGCACCCAAACCACT...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTAGGGGCGCGTCCCTCTaGTGTTTCCTCTTTTTGCCA +
Preference number: 5 (lower is better)
Translates to: QMCNNQRECTTSISLVLSRGASL*CFLFLP
Trigger: TGGCAAAAAGAGGAAACACAAGAGGGACGCGCCCCT...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCAGAGAGGAAAAATTTTaGCAGCAGGACACAAGGGTT +
Preference number: 5 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVREEKF*QQDTRV
Trigger: AACCCTTGTGTCCTGCTGCAAAAATTTTTCCTCTCT...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTCAGGTAGCTAGAGTCTaGAGGGTCAGAAACCAAGGC +
Preference number: 5 (lower is better)
Translates to: KNAHPIAHVLPCADLGISQVARV*RVRNQG
Trigger: GCCTTGGTTTCTGACCCTCAAGACTCTAGCTACCTG...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCGATAGTACTTTGCTATaGGTGATACAGCATGACTCA +
Preference number: 5 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVDSTLL*VIQHDS
Trigger: TGAGTCATGCTGTATCACCAATAGCAAAGTACTATC...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAAGCTGTTTCGGGGTTTaGCATGGTGTTGCATCGGAA +
Preference number: 5 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQSCFGV*HGVASE
Trigger: TTCCGATGCAACACCATGCAAAACCCCGAAACAGCT...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp TCATCAAGGAACCATGGCTTGTTTGAGTTGTACCTTGGAAGCCTTTGCTGGAAGAAGAACGAAAGAGCCTaGCTGATCCATGCTGAGATT +
Preference number: 5 (lower is better)
Translates to: SSRNHGLFELYLGSLCWKKNERA*LIHAEI
Trigger: AATCTCAGCATGGATCAGCAAGGCTCTTTCGTTCTT...CTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR CAA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCCATGGCTTGTTTGAGTaGTACCTTGGAAGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCHGLFE*YLGSLC
Trigger: GCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATG...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTGGAACCATGGCTTGTTaGAGTTGTACCTTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: KNAHPIAHVLPCADLGISGTMAC*SCTLEA
Trigger: GGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCC...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp TCATCAAGGAACCATGGCTTGTTTGAGTTGTACCTTGGAAGCCTTTGCTGGAAGTCAAGGAACCATGGCTaGTTTGAGTTGTACCTTGGA +
Preference number: 5 (lower is better)
Translates to: SSRNHGLFELYLGSLCWKSRNHG*FELYLG
Trigger: TCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGA...CTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR CAA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCCTGAGCATGAGATCATaGCACAGAGAAGACAGTCCA +
Preference number: 5 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCLSMRS*HREDSP
Trigger: TGGACTGTCTTCTCTGTGCAATGATCTCATGCTCAG...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp GTTGCTAAGTCAACGTCTGAACAGTGTGAGGCTCCTGAATATCTCCCAGGAGTCACAGAGCCATACACATaGATGCTAAACATAAGAGCT +
Preference number: 5 (lower is better)
Translates to: VAKSTSEQCEAPEYLPGVTEPYT*MLNIRA
Trigger: AGCTCTTATGTTTAGCATCAATGTGTATGGCTCTGT...GACTCCTGGGAGATATTCAGGAGCCTCACACTGTTCAGACGTTGACTTAGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTCCTATAGCCCATGTTTaGCCCTGTGCAGATCTAGGA +
Preference number: 5 (lower is better)
Translates to: KNAHPIAHVLPCADLGISPIAHV*PCADLG
Trigger: TCCTAGATCTGCACAGGGCAAAACATGGGCTATAGG...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAACCTATAGCCCATGTTTaGCCCTGTGCAGATCTAGGA +
Preference number: 5 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQPIAHV*PCADLG
Trigger: TCCTAGATCTGCACAGGGCAAAACATGGGCTATAGG...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAAGTTTTCATCACTGGTaGCCCAGTGATACGGCCTCA +
Preference number: 5 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQSFHHW*PSDTAS
Trigger: TGAGGCCGTATCACTGGGCAACCAGTGATGAAAACT...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACTGGTTGTTGTTGTTGTaGGTCGTCTCTAGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNWLLLL*VVSRGR
Trigger: CCTGCCCCTAGAGACGACCAACAACAACAACAACCA...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTGGCTGGTGGTGGTTGTaGTTGTTGTTGGTCGTCTCT +
Preference number: 5 (lower is better)
Translates to: QMCNNQRECTTSISLVLSGWWWL*LLLVVS
Trigger: AGAGACGACCAACAACAACAACAACCACCACCAGCC...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACCCGGGCTGGTGGTGGTaGTTGTTGTTGTTGGTCGTC +
Preference number: 5 (lower is better)
Translates to: LDLKTECDISKPNKDIQNPGWWW*LLLLVV
Trigger: GACGACCAACAACAACAACAACCACCACCAGCCCGG...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACCCATACGTGCTGGCCTaGTTGTCGCGCTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: LDLKTECDISKPNKDIQNPYVLA*LSRFLL
Trigger: CAAGAGGAAGCGCGACAACAAGGCCAGCACGTATGG...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp TCATCAAGGAACCATGGCTTGTTTGAGTTGTACCTTGGAAGCCTTTGCTGGAAGCTTCGATATAAAGCATaGATGGCCTGTAGCCATCTA +
Preference number: 5 (lower is better)
Translates to: SSRNHGLFELYLGSLCWKLRYKA*MACSHL
Trigger: TAGATGGCTACAGGCCATCAATGCTTTATATCGAAG...CTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTAGTGGTTTGGGTGCTTaGCATTTTCCCAACTGCCTG +
Preference number: 5 (lower is better)
Translates to: QMCNNQRECTTSISLVLSSGLGA*HFPNCL
Trigger: CAGGCAGTTGGGAAAATGCAAAGCACCCAAACCACT...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAGGATGTGTTAGTGGTTaGGGTGCTTTGCATTTTCCC +
Preference number: 5 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQGCVSG*GALHFP
Trigger: GGGAAAATGCAAAGCACCCAAACCACTAACACATCC...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTGGATGTGTTAGTGGTTaGGGTGCTTTGCATTTTCCC +
Preference number: 5 (lower is better)
Translates to: KNAHPIAHVLPCADLGISGCVSG*GALHFP
Trigger: GGGAAAATGCAAAGCACCCAAACCACTAACACATCC...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTGTACCTTGGAAGCCTTaGCTGGAAGAACGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: QMCNNQRECTTSISLVLSVPWKP*LEERKS
Trigger: GCTCTTTCGTTCTTCCAGCAAAGGCTTCCAAGGTAC...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACGTACCTTGGAAGCCTTaGCTGGAAGAACGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNVPWKP*LEERKS
Trigger: GCTCTTTCGTTCTTCCAGCAAAGGCTTCCAAGGTAC...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTCATGGCTTGTTTGAGTaGTACCTTGGAAGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: KNAHPIAHVLPCADLGISHGLFE*YLGSLC
Trigger: GCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATG...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTGGAACCATGGCTTGTTaGAGTTGTACCTTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: QMCNNQRECTTSISLVLSGTMAC*SCTLEA
Trigger: GGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCC...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTCTGAGCATGAGATCATaGCACAGAGAAGACAGTCCA +
Preference number: 5 (lower is better)
Translates to: KNAHPIAHVLPCADLGISLSMRS*HREDSP
Trigger: TGGACTGTCTTCTCTGTGCAATGATCTCATGCTCAG...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACCCTATAGCCCATGTTTaGCCCTGTGCAGATCTAGGA +
Preference number: 5 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNPIAHV*PCADLG
Trigger: TCCTAGATCTGCACAGGGCAAAACATGGGCTATAGG...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCACCAAGTTGCTGGCTTaGGAGAATGCTTTTCCAAGT +
Preference number: 5 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCTKLLA*ENAFPS
Trigger: ACTTGGAAAAGCATTCTCCAAAGCCAGCAACTTGGT...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACAGTTTTCATCACTGGTaGCCCAGTGATACGGCCTCA +
Preference number: 5 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNSFHHW*PSDTAS
Trigger: TGAGGCCGTATCACTGGGCAACCAGTGATGAAAACT...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTGGTGGTGGTTGTTGTaGTTGTTGGTCGTCTCTAGG +
Preference number: 5 (lower is better)
Translates to: QMCNNQRECTTSISLVLSWWWLL*LLVVSR
Trigger: CCTAGAGACGACCAACAACAACAACAACCACCACCA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp TCATCAAGGAACCATGGCTTGTTTGAGTTGTACCTTGGAAGCCTTTGCTGGAAGTGTTGGGATAGTACTTaGCTATTGGTGATACAGCAT +
Preference number: 5 (lower is better)
Translates to: SSRNHGLFELYLGSLCWKCWDST*LLVIQH
Trigger: ATGCTGTATCACCAATAGCAAAGTACTATCCCAACA...CTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR CAA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCTCAAGCCCCACTGCTTaGATATCCAATCTCTATATG +
Preference number: 5 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCSSPTA*ISNLYM
Trigger: CATATAGAGATTGGATATCAAAGCAGTGGGGCTTGA...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTGGGTTTTGCATGGTGTaGCATCGGAATCTACATCAC +
Preference number: 5 (lower is better)
Translates to: QMCNNQRECTTSISLVLSGFCMV*HRNLHH
Trigger: GTGATGTAGATTCCGATGCAACACCATGCAAAACCC...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAATGTTTGAGTTGTACCTaGGAAGCCTTTGCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQCLSCT*EAFAGR
Trigger: TCTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACA...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTTGTTTGAGTTGTACCTaGGAAGCCTTTGCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: KNAHPIAHVLPCADLGISCLSCT*EAFAGR
Trigger: TCTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACA...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACCATGGCTTGTTTGAGTaGTACCTTGGAAGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNHGLFE*YLGSLC
Trigger: GCAAAGGCTTCCAAGGTACAACTCAAACAAGCCATG...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACCAGGTAGCTAGAGTCTaGAGGGTCAGAAACCAAGGC +
Preference number: 5 (lower is better)
Translates to: LDLKTECDISKPNKDIQNQVARV*RVRNQG
Trigger: GCCTTGGTTTCTGACCCTCAAGACTCTAGCTACCTG...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAACTACCCACAAATGTTTaGACAAGATGGCAGGTAGCT +
Preference number: 5 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQLPTNV*TRWQVA
Trigger: AGCTACCTGCCATCTTGTCAAAACATTTGTGGGTAG...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTCTACCCACAAATGTTTaGACAAGATGGCAGGTAGCT +
Preference number: 5 (lower is better)
Translates to: KNAHPIAHVLPCADLGISLPTNV*TRWQVA
Trigger: AGCTACCTGCCATCTTGTCAAAACATTTGTGGGTAG...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACTGGTTGTTGTTGTTGTaGGTCGTCTCTAGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LDLKTECDISKPNKDIQNWLLLL*VVSRGR
Trigger: CCTGCCCCTAGAGACGACCAACAACAACAACAACCA...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS GCA 90 bp CCATTTCCATTGCATGAAGGCTCAGGTCTATTCTTCAAGCCCCACTaGTTTGATATCCAATCTCTATATGTGGCAACTTCATCTGTTACT +
Preference number: 5 (lower is better)
Translates to: PFPLHEGSGLFFKPH*FDIQSLYVATSSVT
Trigger: AGTAACAGATGAAGTTGCCACATATAGAGATTGGATATCAAAGCAGTGGGGCTTGAAGAATAGACCTGAGCCTTCATGCAATGGAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436909.8
ENST00000561678.7
ENST00000562717.1
CDS CCA 90 bp TTGATGGCCTGTAGCCATCTAGCATATTTTTCTGTACTTCATCTTTaGCCACATATGAACCACCATCCTTTATCCGGATGCCAGTCTTTA +
Preference number: 5 (lower is better)
Translates to: LMACSHLAYFSVLHL*PHMNHHPLSGCQSL
Trigger: TAAAGACTGGCATCCGGATAAAGGATGGTGGTTCATATGTGGCCAAAGATGAAGTACAGAAAAATATGCTAGATGGCTACAGGCCATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
ENST00000562717.1
CDS-3UTR CAA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAATTCTTGGTAAAATCTTaGATGAGGTCAGCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQFLVKS*MRSAAL
Trigger: GAGAGCAGCTGACCTCATCAAAGATTTTACCAAGAA...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTAGAGAACACCATAGTTaGTATTGGGGATGCAAGCAT +
Preference number: 5 (lower is better)
Translates to: KNAHPIAHVLPCADLGISREHHS*YWGCKH
Trigger: ATGCTTGCATCCCCAATACAAACTATGGTGTTCTCT...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTCTTCGATATAAAGCATaGATGGCCTGTAGCCATCTA +
Preference number: 5 (lower is better)
Translates to: KNAHPIAHVLPCADLGISLRYKA*MACSHL
Trigger: TAGATGGCTACAGGCCATCAATGCTTTATATCGAAG...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACAGCTGTTTCGGGGTTTaGCATGGTGTTGCATCGGAA +
Preference number: 5 (lower is better)
Translates to: LDLKTECDISKPNKDIQNSCFGV*HGVASE
Trigger: TTCCGATGCAACACCATGCAAAACCCCGAAACAGCT...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTGTTTGAGTTGTACCTaGGAAGCCTTTGCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: QMCNNQRECTTSISLVLSCLSCT*EAFAGR
Trigger: TCTTCCAGCAAAGGCTTCCAAGGTACAACTCAAACA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACGGAACCATGGCTTGTTaGAGTTGTACCTTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: LDLKTECDISKPNKDIQNGTMAC*SCTLEA
Trigger: GGCTTCCAAGGTACAACTCAAACAAGCCATGGTTCC...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTCAAGGAACCATGGCTaGTTTGAGTTGTACCTTGGA +
Preference number: 5 (lower is better)
Translates to: QMCNNQRECTTSISLVLSSRNHG*FELYLG
Trigger: TCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACTCAAGGAACCATGGCTaGTTTGAGTTGTACCTTGGA +
Preference number: 5 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNSRNHG*FELYLG
Trigger: TCCAAGGTACAACTCAAACAAGCCATGGTTCCTTGA...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTAGAGAGGAAAAATTTTaGCAGCAGGACACAAGGGTT +
Preference number: 5 (lower is better)
Translates to: KNAHPIAHVLPCADLGISREEKF*QQDTRV
Trigger: AACCCTTGTGTCCTGCTGCAAAAATTTTTCCTCTCT...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTAGATCCAAGCTAGATTaGAAAACTGAGTGCGACATC +
Preference number: 5 (lower is better)
Translates to: KNAHPIAHVLPCADLGISRSKLD*KTECDI
Trigger: GATGTCGCACTCAGTTTTCAAATCTAGCTTGGATCT...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACCTACCCACAAATGTTTaGACAAGATGGCAGGTAGCT +
Preference number: 5 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNLPTNV*TRWQVA
Trigger: AGCTACCTGCCATCTTGTCAAAACATTTGTGGGTAG...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp AAAAATGCTCACCCTATAGCCCATGTTTTGCCCTGTGCAGATCTAGGAATATCTAAAGACTGGAGACTCTaGACACGTCTAACAAACAAG +
Preference number: 5 (lower is better)
Translates to: KNAHPIAHVLPCADLGISKDWRL*TRLTNK
Trigger: CTTGTTTGTTAGACGTGTCAAGAGTCTCCAGTCTTT...AGATATTCCTAGATCTGCACAGGGCAAAACATGGGCTATAGGGTGAGCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAAAAGACTGGAGACTCTaGACACGTCTAACAAACAAG +
Preference number: 5 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQKDWRL*TRLTNK
Trigger: CTTGTTTGTTAGACGTGTCAAGAGTCTCCAGTCTTT...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTGTAACACCATTTCCATaGCATGAAGGCTCAGGTCTA +
Preference number: 5 (lower is better)
Translates to: QMCNNQRECTTSISLVLSVTPFP*HEGSGL
Trigger: TAGACCTGAGCCTTCATGCAATGGAAATGGTGTTAC...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACGTAACACCATTTCCATaGCATGAAGGCTCAGGTCTA +
Preference number: 5 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNVTPFP*HEGSGL
Trigger: TAGACCTGAGCCTTCATGCAATGGAAATGGTGTTAC...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS GCA 90 bp ATCTTACCATTGCATGAAGGCTCAGGTCTATTCTTCAAGCCCCACTaGTTTGATATCCAATCTCTATATGTGGCAACTTCATCTGTTACT +
Preference number: 5 (lower is better)
Translates to: ILPLHEGSGLFFKPH*FDIQSLYVATSSVT
Trigger: AGTAACAGATGAAGTTGCCACATATAGAGATTGGATATCAAAGCAGTGGGGCTTGAAGAATAGACCTGAGCCTTCATGCAATGGTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS-3UTR CAA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACTCCTCATCTGCGACTTaGTGTTTCCGAAGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: LDLKTECDISKPNKDIQNSSSAT*CFRRAS
Trigger: AGAAGCTCTTCGGAAACACAAAGTCGCAGATGAGGA...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp TCTAACAGATCAACCTTAATAACTACACCTCCTAGTCACTGGAGAGGGCTTTGCATAGGTACAGTTGCTTaGTCTAAAACTTTCACCGAA +
Preference number: 5 (lower is better)
Translates to: SNRSTLITTPPSHWRGLCIGTVA*SKTFTE
Trigger: TTCGGTGAAAGTTTTAGACAAAGCAACTGTACCTAT...GCAAAGCCCTCTCCAGTGACTAGGAGGTGTAGTTATTAAGGTTGATCTGTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTTCTTGGTAAAATCTTaGATGAGGTCAGCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: QMCNNQRECTTSISLVLSFLVKS*MRSAAL
Trigger: GAGAGCAGCTGACCTCATCAAAGATTTTACCAAGAA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTAGAGAACACCATAGTTaGTATTGGGGATGCAAGCAT +
Preference number: 5 (lower is better)
Translates to: QMCNNQRECTTSISLVLSREHHS*YWGCKH
Trigger: ATGCTTGCATCCCCAATACAAACTATGGTGTTCTCT...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAGATAGTACTTTGCTATaGGTGATACAGCATGACTCA +
Preference number: 5 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQDSTLL*VIQHDS
Trigger: TGAGTCATGCTGTATCACCAATAGCAAAGTACTATC...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACTCAAGCCCCACTGCTTaGATATCCAATCTCTATATG +
Preference number: 5 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNSSPTA*ISNLYM
Trigger: CATATAGAGATTGGATATCAAAGCAGTGGGGCTTGA...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTTCAAGCCCCACTGCTTaGATATCCAATCTCTATATG +
Preference number: 5 (lower is better)
Translates to: QMCNNQRECTTSISLVLSSSPTA*ISNLYM
Trigger: CATATAGAGATTGGATATCAAAGCAGTGGGGCTTGA...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACCTTGATGTTGTTTGTTaGTCATCAAGGAACCATGGC +
Preference number: 5 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNLDVVC*SSRNHG
Trigger: GCCATGGTTCCTTGATGACAAACAAACAACATCAAG...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACCTGAGCATGAGATCATaGCACAGAGAAGACAGTCCA +
Preference number: 5 (lower is better)
Translates to: LDLKTECDISKPNKDIQNLSMRS*HREDSP
Trigger: TGGACTGTCTTCTCTGTGCAATGATCTCATGCTCAG...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTAGATCCAAGCTAGATTaGAAAACTGAGTGCGACATC +
Preference number: 5 (lower is better)
Translates to: QMCNNQRECTTSISLVLSRSKLD*KTECDI
Trigger: GATGTCGCACTCAGTTTTCAAATCTAGCTTGGATCT...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTAAAGACTGGAGACTCTaGACACGTCTAACAAACAAG +
Preference number: 5 (lower is better)
Translates to: QMCNNQRECTTSISLVLSKDWRL*TRLTNK
Trigger: CTTGTTTGTTAGACGTGTCAAGAGTCTCCAGTCTTT...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACTCTCCTCCTCAGGTCTaGGAGACATGTATTCATAAA +
Preference number: 5 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNSPPQV*ETCIHK
Trigger: TTTATGAATACATGTCTCCAAGACCTGAGGAGGAGA...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATAACCCATCATTTCACTCTCTTTGAAAGGCATGGCCTAACCTCTAAGAGGCAAATAGGTACAGTTGCTTaGTCTAAAACTTTCACCGAA +
Preference number: 5 (lower is better)
Translates to: ITHHFTLFERHGLTSKRQIGTVA*SKTFTE
Trigger: TTCGGTGAAAGTTTTAGACAAAGCAACTGTACCTAT...TTGCCTCTTAGAGGTTAGGCCATGCCTTTCAAAGAGAGTGAAATGATGGGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACTGTTGGGATAGTACTTaGCTATTGGTGATACAGCAT +
Preference number: 5 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNCWDST*LLVIQH
Trigger: ATGCTGTATCACCAATAGCAAAGTACTATCCCAACA...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACACAGAGCCATACACATaGATGCTAAACATAAGAGCT +
Preference number: 5 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNTEPYT*MLNIRA
Trigger: AGCTCTTATGTTTAGCATCAATGTGTATGGCTCTGT...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CAAATGTGTAATAACCAAAGGGAATGCACTACATCCATCTCTCTGGTTCTGTCTATAGGTACAGTTGCTTaGTCTAAAACTTTCACCGAA +
Preference number: 5 (lower is better)
Translates to: QMCNNQRECTTSISLVLSIGTVA*SKTFTE
Trigger: TTCGGTGAAAGTTTTAGACAAAGCAACTGTACCTAT...AGACAGAACCAGAGAGATGGATGTAGTGCATTCCCTTTGGTTATTACACATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACTTCTTGGTAAAATCTTaGATGAGGTCAGCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: LDLKTECDISKPNKDIQNFLVKS*MRSAAL
Trigger: GAGAGCAGCTGACCTCATCAAAGATTTTACCAAGAA...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACTTCTGTACTTCATCTTaGGCCACATATGAACCACCA +
Preference number: 5 (lower is better)
Translates to: LDLKTECDISKPNKDIQNFCTSS*ATYEPP
Trigger: TGGTGGTTCATATGTGGCCAAAGATGAAGTACAGAA...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACCTTCGATATAAAGCATaGATGGCCTGTAGCCATCTA +
Preference number: 5 (lower is better)
Translates to: LDLKTECDISKPNKDIQNLRYKA*MACSHL
Trigger: TAGATGGCTACAGGCCATCAATGCTTTATATCGAAG...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACCTTGATGTTGTTTGTTaGTCATCAAGGAACCATGGC +
Preference number: 5 (lower is better)
Translates to: LDLKTECDISKPNKDIQNLDVVC*SSRNHG
Trigger: GCCATGGTTCCTTGATGACAAACAAACAACATCAAG...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp ATCTCGTCTCAGAAATGGCTGCATTTAACAGAGCCATACACATTGATGCTAAACGAATTATACATCTCATaGCACTCAAAGCTGACTACA +
Preference number: 5 (lower is better)
Translates to: ISSQKWLHLTEPYTLMLNELYIS*HSKLTT
Trigger: TGTAGTCAGCTTTGAGTGCAATGAGATGTATAATTC...GTTTAGCATCAATGTGTATGGCTCTGTTAAATGCAGCCATTTCTGAGACGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACTCTCCTCCTCAGGTCTaGGAGACATGTATTCATAAA +
Preference number: 5 (lower is better)
Translates to: LDLKTECDISKPNKDIQNSPPQV*ETCIHK
Trigger: TTTATGAATACATGTCTCCAAGACCTGAGGAGGAGA...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACTGTTGGGATAGTACTTaGCTATTGGTGATACAGCAT +
Preference number: 5 (lower is better)
Translates to: LDLKTECDISKPNKDIQNCWDST*LLVIQH
Trigger: ATGCTGTATCACCAATAGCAAAGTACTATCCCAACA...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS-3UTR CAA 90 bp CTAGATTTGAAAACTGAGTGCGACATCTCCAAACCAAACAAAGACATTCAAAACTGCCTAGAAACATTCTaGGTTAGTGACAGAAACACT +
Preference number: 5 (lower is better)
Translates to: LDLKTECDISKPNKDIQNCLETF*VSDRNT
Trigger: AGTGTTTCTGTCACTAACCAAGAATGTTTCTAGGCA...GTTTTGAATGTCTTTGTTTGGTTTGGAGATGTCGCACTCAGTTTTCAAATCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS GCA 72 bp TGCTGCTGCTGCTGCCGCTGCTGCCGCTGCTGCTGCTaGTGCTGCTCGGGGCCCGCCGCGGGCGGCGCGGTC +
Preference number: 6 (lower is better)
Translates to: CCCCCRCCRCCC*CCSGPAAGGAV
Trigger: GACCGCGCCGCCCGCGGCGGGCCCCGAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCGGCAGCAGCAGCAGCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS GCA 72 bp CTCGGCTGCTGCTGCTGCTGCCGCTGCTGCCGCTGCTaGTGCTGCTGCTGCTCGGGGCCCGCCGCGGGCGGC +
Preference number: 6 (lower is better)
Translates to: LGCCCCCRCCRC*CCCCSGPAAGG
Trigger: GCCGCCCGCGGCGGGCCCCGAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCGGCAGCAGCAGCAGCAGCCGAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS GCA 72 bp GGCCTCGGCTGCTGCTGCTGCTGCCGCTGCTGCCGCTaGTGCTGCTGCTGCTGCTCGGGGCCCGCCGCGGGC +
Preference number: 6 (lower is better)
Translates to: GLGCCCCCRCCR*CCCCCSGPAAG
Trigger: GCCCGCGGCGGGCCCCGAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCGGCAGCAGCAGCAGCAGCCGAGGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS GCA 72 bp CGCCGCCTCAGGCGCACGCCCGGCCTCGGCTGCTGCTaGTGCTGCCGCTGCTGCCGCTGCTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: RRLRRTPGLGCC*CCRCCRCCCCC
Trigger: GCAGCAGCAGCAGCAGCGGCAGCAGCGGCAGCAGCAGCAGCAGCCGAGGCCGGGCGTGCGCCTGAGGCGGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS TCA 72 bp GCGCGCGCGGCTTCTCCGCCTCGGCTTCCCCGGTGCTaGGCGTGGACGAGGCCGCATGGAGGTTGCCGCCCG +
Preference number: 6 (lower is better)
Translates to: ARAASPPRLPRC*AWTRPHGGCRP
Trigger: CGGGCGGCAACCTCCATGCGGCCTCGTCCACGCTCAGCACCGGGGAAGCCGAGGCGGAGAAGCCGCGCGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436909.8
CDS GCA 72 bp GCAGGAAGTCCCGCTGCTCCGCGGGCAGCGCGTGGCTaGCCAGCAGGCGCTCCCCGGAGCGATACATGCCGG +
Preference number: 6 (lower is better)
Translates to: AGSPAAPRAARG*PAGAPRSDTCR
Trigger: CCGGCATGTATCGCTCCGGGGAGCGCCTGCTGGGCAGCCACGCGCTGCCCGCGGAGCAGCGGGACTTCCTGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS GCA 72 bp CTCAGGCGCACGCCCGGCCTCGGCTGCTGCTGCTGCTaGCGCTGCTGCCGCTGCTGCTGCTGCTGCTGCTCG +
Preference number: 6 (lower is better)
Translates to: LRRTPGLGCCCC*RCCRCCCCCCS
Trigger: CGAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCGGCAGCAGCAGCAGCAGCCGAGGCCGGGCGTGCGCCTGAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS CCA 72 bp TCGGCTTCCCCGGTGCTGAGCGTGGACGAGGCCGCATaGAGGTTGCCGCCCGCCCCGCAGGGAGCGCGTTGT +
Preference number: 6 (lower is better)
Translates to: SASPVLSVDEAA*RLPPAPQGARC
Trigger: ACAACGCGCTCCCTGCGGGGCGGGCGGCAACCTCCATGCGGCCTCGTCCACGCTCAGCACCGGGGAAGCCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436909.8
CDS CCA 72 bp AGGGGCAGGAAGTCCCGCTGCTCCGCGGGCAGCGCGTaGCTGCCCAGCAGGCGCTCCCCGGAGCGATACATG +
Preference number: 6 (lower is better)
Translates to: RGRKSRCSAGSA*LPSRRSPERYM
Trigger: CATGTATCGCTCCGGGGAGCGCCTGCTGGGCAGCCACGCGCTGCCCGCGGAGCAGCGGGACTTCCTGCCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS CCA 72 bp CTTCCTCTTGTTGCTGCTGCCCGAGGCCGAATCGGCTaGATCGGCGGCGGGGACGGCGGCCGAAGGGTGCGG +
Preference number: 6 (lower is better)
Translates to: LPLVAAARGRIG*IGGGDGGRRVR
Trigger: CCGCACCCTTCGGCCGCCGTCCCCGCCGCCGATCCAGCCGATTCGGCCTCGGGCAGCAGCAACAAGAGGAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS GCA 72 bp TTGTTGTTGGTCGTCTCTAGGGGCAGGAAGTCCCGCTaGTCCGCGGGCAGCGCGTGGCTGCCCAGCAGGCGC +
Preference number: 6 (lower is better)
Translates to: LLLVVSRGRKSR*SAGSAWLPSRR
Trigger: GCGCCTGCTGGGCAGCCACGCGCTGCCCGCGGAGCAGCGGGACTTCCTGCCCCTAGAGACGACCAACAACAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS TCA 72 bp CGCCGCTCGCGCCGCCGCTGCTGTGACAGTGGTGGTTaGAGTAGAGGTTCCTCAGCCCCTGGGTCGTCTCCC +
Preference number: 6 (lower is better)
Translates to: RRSRRRCCDSGG*SRGSSAPGSSP
Trigger: GGGAGACGACCCAGGGGCTGAGGAACCTCTACTTCAACCACCACTGTCACAGCAGCGGCGGCGCGAGCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS GCA 72 bp TGCTGGCCTTGTTGTCGCGCTTCCTCTTGTTGCTGCTaGCCGAGGCCGAATCGGCTGGATCGGCGGCGGGGA +
Preference number: 6 (lower is better)
Translates to: CWPCCRASSCCC*PRPNRLDRRRG
Trigger: TCCCCGCCGCCGATCCAGCCGATTCGGCCTCGGGCAGCAGCAACAAGAGGAAGCGCGACAACAAGGCCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS GCA 72 bp ACGTGCTGGCCTTGTTGTCGCGCTTCCTCTTGTTGCTaGTGCCCGAGGCCGAATCGGCTGGATCGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: TCWPCCRASSCC*CPRPNRLDRRR
Trigger: CCGCCGCCGATCCAGCCGATTCGGCCTCGGGCAGCAGCAACAAGAGGAAGCGCGACAACAAGGCCAGCACGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436909.8
ENST00000561678.7
CDS TCA 72 bp ATCCACAGACTGTTGGACGGTCCGAGCTGCTCTGGCTaGAACCAGGCGATCCTCGGATCCATCAAACGGCGG +
Preference number: 6 (lower is better)
Translates to: IHRLLDGPSCSG*NQAILGSIKRR
Trigger: CCGCCGTTTGATGGATCCGAGGATCGCCTGGTTTCAGCCAGAGCAGCTCGGACCGTCCAACAGTCTGTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561678.7
CDS CAA 90 bp ACTCGGTTCCCAGTGGACGGACGGCAAAGCAGCTGTTTCGGGGTTTaGCATGGTGTTGCATCGGAATCTACATCACTAGAGCTGGACTGT +
Preference number: 6 (lower is better)
Translates to: TRFPVDGRQSSCFGV*HGVASESTSLELDC
Trigger: ACAGTCCAGCTCTAGTGATGTAGATTCCGATGCAACACCATGCAAAACCCCGAAACAGCTGCTTTGCCGTCCGTCCACTGGGAACCGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
ENST00000562717.1
CDS CCA 72 bp GGACGGACGGCAAAGCAGCTGTTTCGGGGTTTTGCATaGTGTTGCATCGGAATCTACATCACTAGAGCTGGA +
Preference number: 6 (lower is better)
Translates to: GRTAKQLFRGFA*CCIGIYITRAG
Trigger: TCCAGCTCTAGTGATGTAGATTCCGATGCAACACCATGCAAAACCCCGAAACAGCTGCTTTGCCGTCCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
ENST00000562717.1
CDS CAA 72 bp CCAGTGGACGGACGGCAAAGCAGCTGTTTCGGGGTTTaGCATGGTGTTGCATCGGAATCTACATCACTAGAG +
Preference number: 6 (lower is better)
Translates to: PVDGRQSSCFGV*HGVASESTSLE
Trigger: CTCTAGTGATGTAGATTCCGATGCAACACCATGCAAAACCCCGAAACAGCTGCTTTGCCGTCCGTCCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
ENST00000562717.1
CDS CAA 90 bp ACAGTTGCTTTGTCTAAAACTTTCACCGAATCCTCATCTGCGACTTaGTGTTTCCGAAGAGCTTCTTCCAGAGTCCAGAGGGGTAGGTTC +
Preference number: 6 (lower is better)
Translates to: TVALSKTFTESSSAT*CFRRASSRVQRGRF
Trigger: GAACCTACCCCTCTGGACTCTGGAAGAAGCTCTTCGGAAACACAAAGTCGCAGATGAGGATTCGGTGAAAGTTTTAGACAAAGCAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
ENST00000562717.1
CDS CAA 72 bp AGAGGACGACACTGGACCAAGGAAAATATCTTACCATaGCATGAAGGCTCAGGTCTATTCTTCAAGCCCCAC +
Preference number: 6 (lower is better)
Translates to: RGRHWTKENILP*HEGSGLFFKPH
Trigger: GTGGGGCTTGAAGAATAGACCTGAGCCTTCATGCAATGGTAAGATATTTTCCTTGGTCCAGTGTCGTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357464.4
CDS CCA 72 bp TTCTTAACACTGAAGACAATGCTTGGAAGCCTTTGCTaGAAGAACGAAAGAGCCTTGCTGATCCATGCTGAG +
Preference number: 6 (lower is better)
Translates to: FLTLKTMLGSLC*KNERALLIHAE
Trigger: CTCAGCATGGATCAGCAAGGCTCTTTCGTTCTTCCAGCAAAGGCTTCCAAGCATTGTCTTCAGTGTTAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562717.1
CDS GCA 72 bp TTGCATGAAGGCTCAGGTCTATTCTTCAAGCCCCACTaGTTTGATATCCAATCTCTATATGTGGCAACTTCA +
Preference number: 6 (lower is better)
Translates to: LHEGSGLFFKPH*FDIQSLYVATS
Trigger: TGAAGTTGCCACATATAGAGATTGGATATCAAAGCAGTGGGGCTTGAAGAATAGACCTGAGCCTTCATGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
ENST00000562717.1
CDS GCA 72 bp AGGATATTTCTTGGTAAAATCTTTGATGAGGTCAGCTaGTCTCACGCCATTCTGTACATTAAAGCTGATATC +
Preference number: 6 (lower is better)
Translates to: RIFLGKIFDEVS*SHAILYIKADI
Trigger: GATATCAGCTTTAATGTACAGAATGGCGTGAGAGCAGCTGACCTCATCAAAGATTTTACCAAGAAATATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
ENST00000562717.1
CDS CAA 72 bp CGTTACCTGGTTGTAAAGGATCTTCGATATAAAGCATaGATGGCCTGTAGCCATCTAGCATATTTTTCTGTA +
Preference number: 6 (lower is better)
Translates to: RYLVVKDLRYKA*MACSHLAYFSV
Trigger: TACAGAAAAATATGCTAGATGGCTACAGGCCATCAATGCTTTATATCGAAGATCCTTTACAACCAGGTAACG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS CAA 90 bp TTCCAACATCGTTACCTGGTTGTAAAGGATCTTCGATATAAAGCATaGATGGCCTGTAGCCATCTAGCATATTTTTCTGTACTTCATCTT +
Preference number: 6 (lower is better)
Translates to: FQHRYLVVKDLRYKA*MACSHLAYFSVLHL
Trigger: AAGATGAAGTACAGAAAAATATGCTAGATGGCTACAGGCCATCAATGCTTTATATCGAAGATCCTTTACAACCAGGTAACGATGTTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357464.4
ENST00000436909.8
ENST00000561678.7
CDS CAA 72 bp CAATACCTGGTTGTAAAGGATCTTCGATATAAAGCATaGATGGCCTGTAGCCATCTAGCATATTTTTCTGTA +
Preference number: 6 (lower is better)
Translates to: QYLVVKDLRYKA*MACSHLAYFSV
Trigger: TACAGAAAAATATGCTAGATGGCTACAGGCCATCAATGCTTTATATCGAAGATCCTTTACAACCAGGTATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562717.1