RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TEF (Homo sapiens)

Ensembl gene IDs: ENSG00000167074

Ensembl transcript IDs: ENST00000266304.9, ENST00000406644.7, ENST00000413942.1

Found 450 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGGTGATCCACCAGGCCAGAGGGAGCGTGCCCGGGAGGGAGAGCTaGCCGGGGCAGGACACTGACATGCTGGATGCGCCTGCCCTGTGT +
Preference number: 1 (lower is better)
Translates to: LVIHQARGSVPGRES*PGQDTDMLDAPALC
Trigger: ACACAGGGCAGGCGCATCCAGCATGTCAGTGTCCTGCCCCGGGCAGCTCTCCCTCCCGGGCACGCTCCCTCTGGCCTGGTGGATCACCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CCA 90 bp GTGAGGAGACTGGCCCCTCAGGGACGTCGCCACGTGCGCAGGCCATaGTATAATGAAGCTGAGACGTGGCCGCTCCTGCAGCAGGTGCGC +
Preference number: 1 (lower is better)
Translates to: VRRLAPQGRRHVRRP*YNEAETWPLLQQVR
Trigger: GCGCACCTGCTGCAGGAGCGGCCACGTCTCAGCTTCATTATACCATGGCCTGCGCACGTGGCGACGTCCCTGAGGGGCCAGTCTCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 90 bp CTTGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTaGAGCAAGAATTGCGAGGCCCCAGCTGCCCCCAGGGAGAGTGCA +
Preference number: 1 (lower is better)
Translates to: LALLTPSGQLAWERS*SKNCEAPAAPRESA
Trigger: TGCACTCTCCCTGGGGGCAGCTGGGGCCTCGCAATTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR GCA 90 bp GGCCATGGTATAATGAAGCTGAGACGTGGCCGCTCCTGCAGCAGGTaGGCCGCCATGCGCCCACGACGAGTCATAAGTCTCCACGCGTGT +
Preference number: 1 (lower is better)
Translates to: GHGIMKLRRGRSCSR*AAMRPRRVISLHAC
Trigger: ACACGCGTGGAGACTTATGACTCGTCGTGGGCGCATGGCGGCGCACCTGCTGCAGGAGCGGCCACGTCTCAGCTTCATTATACCATGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR GCA 90 bp ACGTGCGCAGGCCATGGTATAATGAAGCTGAGACGTGGCCGCTCCTaGAGCAGGTGCGCCGCCATGCGCCCACGACGAGTCATAAGTCTC +
Preference number: 1 (lower is better)
Translates to: TCAGHGIMKLRRGRS*SRCAAMRPRRVISL
Trigger: GAGACTTATGACTCGTCGTGGGCGCATGGCGGCGCACCTGCTGCAGGAGCGGCCACGTCTCAGCTTCATTATACCATGGCCTGCGCACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 90 bp ACACAAGAGAAAGGAGTCGTTGTGAGGCAGGGGAGACCACAGCTGTaGGAAGCCACAGCATGGCCAGCCTCACGAGTGGCCCCCATCTCC +
Preference number: 1 (lower is better)
Translates to: TQEKGVVVRQGRPQL*EATAWPASRVAPIS
Trigger: GGAGATGGGGGCCACTCGTGAGGCTGGCCATGCTGTGGCTTCTCACAGCTGTGGTCTCCCCTGCCTCACAACGACTCCTTTCTCTTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 90 bp CTGTGCAGAGACCCCACTCCTGCAGCCTGCTACCCATGCAGACACTaGCGGAGGAGCTGGTGTGTCCTGCTTCCAAGGAAGATGGGAACA +
Preference number: 1 (lower is better)
Translates to: LCRDPTPAACYPCRH*RRSWCVLLPRKMGT
Trigger: TGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTCCTCCGTCAGTGTCTGCATGGGTAGCAGGCTGCAGGAGTGGGGTCTCTGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 90 bp ACAGCAAAAGGGCGAGTCCCGCCACACAAGAGAAAGGAGTCGTTGTaGGGCAGGGGAGACCACAGCTGTGAGAAGCCACAGCATGGCCAG +
Preference number: 1 (lower is better)
Translates to: TAKGRVPPHKRKESL*GRGDHSCEKPQHGQ
Trigger: CTGGCCATGCTGTGGCTTCTCACAGCTGTGGTCTCCCCTGCCTCACAACGACTCCTTTCTCTTGTGTGGCGGGACTCGCCCTTTTGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 90 bp CACGCCCATCGCCTCTGTCTCCTCTTCACCATAGGCTGCCCGCCCTaGGCAAATAAACACACCCATCTCAGGGGTGTCCCAGTGACCCAA +
Preference number: 1 (lower is better)
Translates to: HAHRLCLLFTIGCPP*ANKHTHLRGVPVTQ
Trigger: TTGGGTCACTGGGACACCCCTGAGATGGGTGTGTTTATTTGCTCAGGGCGGGCAGCCTATGGTGAAGAGGAGACAGAGGCGATGGGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 90 bp TGGCACTGTGACCTTGGTGACTCTAGACTAGGTGTCTTGCCCTGCTaGCACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGA +
Preference number: 1 (lower is better)
Translates to: WHCDLGDSRLGVLPC*HPPGSSHGRDPEAR
Trigger: TCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCAAGACACCTAGTCTAGAGTCACCAAGGTCACAGTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 90 bp GGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGAGGAAATaGAGAGGCCTCTCTCAGCCCTGGCACTCATGGCTCAGACAGCAG +
Preference number: 1 (lower is better)
Translates to: GQTSFTWPLSSLERK*RGLSQPWHSWLRQQ
Trigger: CTGCTGTCTGAGCCATGAGTGCCAGGGCTGAGAGAGGCCTCTTCATTTCCTCTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR GCA 90 bp ACACTCTTTCCAAGTAAGCACTTTGGGAAAGAACCCGATACCCACTaGCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGG +
Preference number: 1 (lower is better)
Translates to: TLFPSKHFGKEPDTH*LGERREGTKQAEGG
Trigger: CCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTTACTTGGAAAGAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CCA 90 bp CTAGGAGTCTCTCCTCCACAGCCAATGAAATGCAGAGACAGCCGATaGCCTCAGAGCCATAAGGGAAAAGGGGTGCGGGAGCCGAGAAAC +
Preference number: 1 (lower is better)
Translates to: LGVSPPQPMKCRDSR*PQSHKGKGVREPRN
Trigger: GTTTCTCGGCTCCCGCACCCCTTTTCCCTTATGGCTCTGAGGCCATCGGCTGTCTCTGCATTTCATTGGCTGTGGAGGAGAGACTCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR GCA 90 bp CAGACAGCAGCCATCCTAGGAGTCTCTCCTCCACAGCCAATGAAATaGAGAGACAGCCGATGGCCTCAGAGCCATAAGGGAAAAGGGGTG +
Preference number: 1 (lower is better)
Translates to: QTAAILGVSPPQPMK*RDSRWPQSHKGKGV
Trigger: CACCCCTTTTCCCTTATGGCTCTGAGGCCATCGGCTGTCTCTGCATTTCATTGGCTGTGGAGGAGAGACTCCTAGGATGGCTGCTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CCA 90 bp GCACATAAGGCCAATGGGCTACGGTCTGCTTCTGCCCTCTCTGGCTaGGAAGAAGGAATTTCTCTCTTGCCTCCTTCCCCCAACAAAGGT +
Preference number: 1 (lower is better)
Translates to: AHKANGLRSASALSG*EEGISLLPPSPNKG
Trigger: ACCTTTGTTGGGGGAAGGAGGCAAGAGAGAAATTCCTTCTTCCCAGCCAGAGAGGGCAGAAGCAGACCGTAGCCCATTGGCCTTATGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 90 bp CCATCTCAGGGGTGTCCCAGTGACCCAAATGAGCAGAGGCTTCCATaGGTTTCCTCAGTGAATCTTCTGAGCACAGCAAAAGGGCGAGTC +
Preference number: 1 (lower is better)
Translates to: PSQGCPSDPNEQRLP*VSSVNLLSTAKGRV
Trigger: GACTCGCCCTTTTGCTGTGCTCAGAAGATTCACTGAGGAAACTCATGGAAGCCTCTGCTCATTTGGGTCACTGGGACACCCCTGAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR GCA 90 bp CAGCCTGCTACCCATGCAGACACTGACGGAGGAGCTGGTGTGTCCTaGTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTGTCTG +
Preference number: 1 (lower is better)
Translates to: QPATHADTDGGAGVS*FQGRWEQMLLKDCL
Trigger: CAGACAGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTCCTCCGTCAGTGTCTGCATGGGTAGCAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CCA 90 bp GCAGACACTGACGGAGGAGCTGGTGTGTCCTGCTTCCAAGGAAGATaGGAACAGATGTTACTCAAAGACTGTCTGGGGAGAATGAGGTGC +
Preference number: 1 (lower is better)
Translates to: ADTDGGAGVSCFQGR*EQMLLKDCLGRMRC
Trigger: GCACCTCATTCTCCCCAGACAGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTCCTCCGTCAGTGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CCA 90 bp GTGCCCCCTCCAACCTCAGAAGCCAGACAGGAAAACCTCTTCCTTTaGCCAAGGGTAAGAGTTACCCAGGTCCTCCACAAAGTTGCCATA +
Preference number: 1 (lower is better)
Translates to: VPPPTSEARQENLFL*PRVRVTQVLHKVAI
Trigger: TATGGCAACTTTGTGGAGGACCTGGGTAACTCTTACCCTTGGCCAAAGGAAGAGGTTTTCCTGTCTGGCTTCTGAGGTTGGAGGGGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 90 bp CCACAGAAAGCCAAGGTAAAGTCAACTTCTCTAGCCTCCAGTGACTaGCAGATGTCAAAGATCCAAGCACAGGAGCCGCAGTCTCCAGCG +
Preference number: 1 (lower is better)
Translates to: PQKAKVKSTSLASSD*QMSKIQAQEPQSPA
Trigger: CGCTGGAGACTGCGGCTCCTGTGCTTGGATCTTTGACATCTGTCAGTCACTGGAGGCTAGAGAAGTTGACTTTACCTTGGCTTTCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 90 bp GAACCCACAGAAAGCCAAGGTAAAGTCAACTTCTCTAGCCTCCAGTaGCTGACAGATGTCAAAGATCCAAGCACAGGAGCCGCAGTCTCC +
Preference number: 1 (lower is better)
Translates to: EPTESQGKVNFSSLQ*LTDVKDPSTGAAVS
Trigger: GGAGACTGCGGCTCCTGTGCTTGGATCTTTGACATCTGTCAGTCACTGGAGGCTAGAGAAGTTGACTTTACCTTGGCTTTCTGTGGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR GCA 90 bp CCTCAGCAGGGTTACATGTACCCAGACTTAAGGTTCACTGCTAAGTaGCCCCTCCAACCTCAGAAGCCAGACAGGAAAACCTCTTCCTTT +
Preference number: 1 (lower is better)
Translates to: PQQGYMYPDLRFTAK*PLQPQKPDRKTSSF
Trigger: AAAGGAAGAGGTTTTCCTGTCTGGCTTCTGAGGTTGGAGGGGGCACTTAGCAGTGAACCTTAAGTCTGGGTACATGTAACCCTGCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR GCA 90 bp GAGAATGAGGTGCGTGACAGACACACCTTAAGTGGAAACGCGCCCTaGTACCTGAGAAGACATAGGGTGACAATGATCACAACTCATTCT +
Preference number: 1 (lower is better)
Translates to: ENEVRDRHTLSGNAP*YLRRHRVTMITTHS
Trigger: AGAATGAGTTGTGATCATTGTCACCCTATGTCTTCTCAGGTAGCAGGGCGCGTTTCCACTTAAGGTGTGTCTGTCACGCACCTCATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 90 bp TTGAAAACTCTCCCTCTCTCTAAATGCACACGTTCCTCCATCAGATaGGACATTTATAATATGAATATTCTTGCAAAGTTCCAGCTCATT +
Preference number: 1 (lower is better)
Translates to: LKTLPLSKCTRSSIR*DIYNMNILAKFQLI
Trigger: AATGAGCTGGAACTTTGCAAGAATATTCATATTATAAATGTCTCATCTGATGGAGGAACGTGTGCATTTAGAGAGAGGGAGAGTTTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 90 bp TCTCTAAATGCACACGTTCCTCCATCAGATGAGACATTTATAATATaGATATTCTTGCAAAGTTCCAGCTCATTCATGATTTGTCTGTTC +
Preference number: 1 (lower is better)
Translates to: SLNAHVPPSDETFII*IFLQSSSSFMICLF
Trigger: GAACAGACAAATCATGAATGAGCTGGAACTTTGCAAGAATATTCATATTATAAATGTCTCATCTGATGGAGGAACGTGTGCATTTAGAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp CCTCCCTTGGCCTCAGGGCCCCTTGTCAAGTCCCCCGGAGAGGTGGGTGTGCAGGGCAGAGGTCTGAGGTaGAGGCAGTACCCCGCCCGG +
Preference number: 2 (lower is better)
Translates to: PPLASGPLVKSPGEVGVQGRGLR*RQYPAR
Trigger: CCGGGCGGGGTACTGCCTGCACCTCAGACCTCTGCC...CTGCACACCCACCTCTCCGGGGGACTTGACAAGGGGCCCTGAGGCCAAGGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCCCCCAGGCAGAGGTCTaGGGTGCAGGCAGTACCCCG +
Preference number: 2 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPPQAEV*GAGSTP
Trigger: CGGGGTACTGCCTGCACCTCAGACCTCTGCCTGGGG...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCAGACGTGGCCGCTCCTaGAGCAGGTGCGCCGCCATG +
Preference number: 2 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPRRGRS*SRCAAM
Trigger: CATGGCGGCGCACCTGCTGCAGGAGCGGCCACGTCT...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp CCTCCCTTGGCCTCAGGGCCCCTTGTCAAGTCCCCCGGAGAGGTGGGTGTGCAGGCCGTGGCATTCCCCTaGGGTGAGGTCCACGGCTTG +
Preference number: 2 (lower is better)
Translates to: PPLASGPLVKSPGEVGVQAVAFP*GEVHGL
Trigger: CAAGCCGTGGACCTCACCCCAGGGGAATGCCACGGC...CTGCACACCCACCTCTCCGGGGGACTTGACAAGGGGCCCTGAGGCCAAGGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp CCTCCCTTGGCCTCAGGGCCCCTTGTCAAGTCCCCCGGAGAGGTGGGTGTGCAGAAGTCTCCACGCGTGTaGGGGGTTACAGGGAGCCCC +
Preference number: 2 (lower is better)
Translates to: PPLASGPLVKSPGEVGVQKSPRV*GVTGSP
Trigger: GGGGCTCCCTGTAACCCCTCACACGCGTGGAGACTT...CTGCACACCCACCTCTCCGGGGGACTTGACAAGGGGCCCTGAGGCCAAGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCCGCTGGGCACACTTCTaGTGCAGGCCCCAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPRWAHF*CRPQPQ
Trigger: TTGGGGCTGGGGCCTGCAGCAGAAGTGTGCCCAGCG...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CAA 90 bp GACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAATaGCGAGGCCCCAGCTGCCCCCAGGGAGAGTGCACTCCAGCCCAG +
Preference number: 2 (lower is better)
Translates to: DTLRAARMGEILKQE*RGPSCPQGECTPAQ
Trigger: CTGGGCTGGAGTGCACTCTCCCTGGGGGCAGCTGGGGCCTCGCAATTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp GATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGTGCGTTCCCCACCAGTaGGGAGACTGGCCCCTCAGG +
Preference number: 2 (lower is better)
Translates to: DTHCLGERREGTKQAEGGCVPHQ*GDWPLR
Trigger: CCTGAGGGGCCAGTCTCCTCACTGGTGGGGAACGCA...CCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp CACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGATAAAGCGCTCCTGCAGCAGGTaGGCCGCCATGCGCCCACGA +
Preference number: 2 (lower is better)
Translates to: HCLGERREGTKQAEGGIKRSCSR*AAMRPR
Trigger: TCGTGGGCGCATGGCGGCGCACCTGCTGCAGGAGCG...CTTTATCCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp CACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAAGAAGCAGAGGGCCCAGGAGGGCAGGACACTGACATaGTGGATGCGCCTGCCCTGT +
Preference number: 2 (lower is better)
Translates to: HRSRSLQRSASKKQRAQEGRTLT*WMRLPC
Trigger: ACAGGGCAGGCGCATCCAGCATGTCAGTGTCCTGCC...CTCCTGGGCCCTCTGCTTCTTGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp CCTCCCTTGGCCTCAGGGCCCCTTGTCAAGTCCCCCGGAGAGGTGGGTGTGCAGTACCCATGCAGACACTaGCGGAGGAGCTGGTGTGTC +
Preference number: 2 (lower is better)
Translates to: PPLASGPLVKSPGEVGVQYPCRH*RRSWCV
Trigger: GACACACCAGCTCCTCCGTCAGTGTCTGCATGGGTA...CTGCACACCCACCTCTCCGGGGGACTTGACAAGGGGCCCTGAGGCCAAGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp CACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGATAAAGGGCAGAGGTCTGAGGTaGAGGCAGTACCCCGCCCGG +
Preference number: 2 (lower is better)
Translates to: HCLGERREGTKQAEGGIKGRGLR*RQYPAR
Trigger: CCGGGCGGGGTACTGCCTGCACCTCAGACCTCTGCC...CTTTATCCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp CACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAAGAAGCAGAGGGCCCAGGAGAGGGACGTCGCCACGTaGGCAGGCCATGGTATAATG +
Preference number: 2 (lower is better)
Translates to: HRSRSLQRSASKKQRAQERDVAT*AGHGIM
Trigger: CATTATACCATGGCCTGCGCACGTGGCGACGTCCCT...CTCCTGGGCCCTCTGCTTCTTGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCAGGAGTGACCTCCCTTaGCCTCAGGGCCCCTTGTCA +
Preference number: 2 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPRSDLP*PQGPLS
Trigger: TGACAAGGGGCCCTGAGGCCAAGGGAGGTCACTCCT...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCCCGATACCCACTGCCTaGGGGAAAGAAGGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPPIPTA*GKEGRA
Trigger: TGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGG...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp AGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGCCCCAGGCAGAGGTCTaGGGTGCAGGCAGTACCCCG +
Preference number: 2 (lower is better)
Translates to: RPGLVGQTSFTWPLSSLEPQAEV*GAGSTP
Trigger: CGGGGTACTGCCTGCACCTCAGACCTCTGCCTGGGG...CTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp GAAAGAGCAGGCCCAGAGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCAGAGTCCAGGGACCCTaGGCGCCCAGGAGAGAGGTG +
Preference number: 2 (lower is better)
Translates to: ERAGPEAWSSGTNELHMARVQGP*APRREV
Trigger: CACCTCTCTCCTGGGCGCTCAGGGTCCCTGGACTCT...GGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCTCTGGGCCTGCTCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp TTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACGGTGTCTTGCCCTGCTaGCACCCTCCGGGCAGCTCG +
Preference number: 2 (lower is better)
Translates to: LGKNPIPTAWGKEGRAPNGVLPC*HPPGSS
Trigger: CGAGCTGCCCGGAGGGTGTCAGCAGGGCAAGACACC...GTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp CCTCCCTTGGCCTCAGGGCCCCTTGTCAAGTCCCCCGGAGAGGTGGGTGTGCAGCAGGGCCTGGGACTCTaGACCACCACGGTAAATAAA +
Preference number: 2 (lower is better)
Translates to: PPLASGPLVKSPGEVGVQQGLGL*TTTVNK
Trigger: TTTATTTACCGTGGTGGTTCAGAGTCCCAGGCCCTG...CTGCACACCCACCTCTCCGGGGGACTTGACAAGGGGCCCTGAGGCCAAGGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp TTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACCCCGGGGCAGGACACTaGCATGCTGGATGCGCCTGC +
Preference number: 2 (lower is better)
Translates to: LGKNPIPTAWGKEGRAPNPGAGH*HAGCAC
Trigger: GCAGGCGCATCCAGCATGTCAGTGTCCTGCCCCGGG...GTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp CACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGATAAAGGAACCGCCCTCTTGGTaGTCCACCAGGCCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: HCLGERREGTKQAEGGIKEPPSW*STRPEG
Trigger: TCCCTCTGGCCTGGTGGATCACCAAGAGGGCGGTTC...CTTTATCCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp CACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAAGAAGCAGAGGGCCCAGGAGGGAGCTGGTGTGTCCTaGTTCCAAGGAAGATGGGAA +
Preference number: 2 (lower is better)
Translates to: HRSRSLQRSASKKQRAQEGAGVS*FQGRWE
Trigger: TTCCCATCTTCCTTGGAAGCAGGACACACCAGCTCC...CTCCTGGGCCCTCTGCTTCTTGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp ACAGATGTCAAAGATCCAAGCACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCATTGCGAGGCCCCAGCTaGCCCCAGGGAGAGTGCACT +
Preference number: 2 (lower is better)
Translates to: TDVKDPSTGAAVSSGRPPLRGPS*PQGECT
Trigger: AGTGCACTCTCCCTGGGGGCAGCTGGGGCCTCGCAA...TGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTGCTTGGATCTTTGACATCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CAA 90 bp TCTGGAGTAGAGCTTTGCCATGAAAACCAGATGCTCCTCGGCCCTTaGCGTTCCAAGGAGCACGGCTCCCGGGGCCCAGGTAGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: SGVELCHENQMLLGP*RSKEHGSRGPGRGL
Trigger: CAGCCCTCTACCTGGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTTTCATGGCAAAGCTCTACTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp ACAGATGTCAAAGATCCAAGCACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCATCCTGGGACCAAGACTaGGGGGACCCTAGGCCTGTG +
Preference number: 2 (lower is better)
Translates to: TDVKDPSTGAAVSSGRPPSWDQD*GDPRPV
Trigger: CACAGGCCTAGGGTCCCCTCAGTCTTGGTCCCAGGA...TGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTGCTTGGATCTTTGACATCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp CACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAAGAAGCAGAGGGCCCAGGAGGATCACAACTCATTCTaGAGAGATAGCCCTCGGCAG +
Preference number: 2 (lower is better)
Translates to: HRSRSLQRSASKKQRAQEDHNSF*RDSPRQ
Trigger: CTGCCGAGGGCTATCTCTGCAGAATGAGTTGTGATC...CTCCTGGGCCCTCTGCTTCTTGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp CTCAGCCCTGGCACTCATGGCTCAGACAGCAGCCATCCTAGGAGTCTCTCCTCCCAGAGACCCCACTCCTaGAGCCTGCTACCCATGCAG +
Preference number: 2 (lower is better)
Translates to: LSPGTHGSDSSHPRSLSSQRPHS*SLLPMQ
Trigger: CTGCATGGGTAGCAGGCTGCAGGAGTGGGGTCTCTG...GGAGGAGAGACTCCTAGGATGGCTGCTGTCTGAGCCATGAGTGCCAGGGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp TTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACTGGGCACACTTCTGCTaGAGGCCCCAGCCCCAAGCC +
Preference number: 2 (lower is better)
Translates to: LGKNPIPTAWGKEGRAPNWAHFC*RPQPQA
Trigger: GGCTTGGGGCTGGGGCCTGCAGCAGAAGTGTGCCCA...GTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp CCTCCCTTGGCCTCAGGGCCCCTTGTCAAGTCCCCCGGAGAGGTGGGTGTGCAGAAAGTCCCAAGAGCCTaGTATCCCGTGAAAGTGGCA +
Preference number: 2 (lower is better)
Translates to: PPLASGPLVKSPGEVGVQKVPRA*YPVKVA
Trigger: TGCCACTTTCACGGGATAGCAGGCTCTTGGGACTTT...CTGCACACCCACCTCTCCGGGGGACTTGACAAGGGGCCCTGAGGCCAAGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAAGGAGCCGAGAAACGCTaGGCACACTTCTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: CPADTLRAARMGEILKQEGAEKR*AHFCCR
Trigger: CCTGCAGCAGAAGTGTGCCCAGCGTTTCTCGGCTCC...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAAGCAGGCCCAGAGGCCTaGTCTAGTGGGACAAACGAG +
Preference number: 2 (lower is better)
Translates to: CPADTLRAARMGEILKQEAGPEA*SSGTNE
Trigger: CTCGTTTGTCCCACTAGACCAGGCCTCTGGGCCTGC...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp CCTCCCTTGGCCTCAGGGCCCCTTGTCAAGTCCCCCGGAGAGGTGGGTGTGCAGAGACTGGACATTGGGTaGAAAGAAAGAGCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: PPLASGPLVKSPGEVGVQRLDIG*KERAGP
Trigger: TGGGCCTGCTCTTTCTTTCCACCCAATGTCCAGTCT...CTGCACACCCACCTCTCCGGGGGACTTGACAAGGGGCCCTGAGGCCAAGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp CACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGATAAAGCAGCTCTCATGCCCATaGTGGAAGGGGGCTGTGGAG +
Preference number: 2 (lower is better)
Translates to: HCLGERREGTKQAEGGIKQLSCP*WKGAVE
Trigger: CTCCACAGCCCCCTTCCACCATGGGCATGAGAGCTG...CTTTATCCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp ACCACGGTAAATAAAGCCAGTGTTACGGAGGACGAAGCACGCCCATCGCCTCTGGGCCAGCCTCACGAGTaGCCCCCATCTCCTGGGACC +
Preference number: 2 (lower is better)
Translates to: TTVNKASVTEDEARPSPLGQPHE*PPSPGT
Trigger: GGTCCCAGGAGATGGGGGCCACTCGTGAGGCTGGCC...CAGAGGCGATGGGCGTGCTTCGTCCTCCGTAACACTGGCTTTATTTACCGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCACAGGTCAGCCTCTGTaGACATCCTCCATCTTGTCC +
Preference number: 2 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPTGQPL*TSSILS
Trigger: GGACAAGATGGAGGATGTCCACAGAGGCTGACCTGT...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp CTCAGCCCTGGCACTCATGGCTCAGACAGCAGCCATCCTAGGAGTCTCTCCTCCTACCCATGCAGACACTaGCGGAGGAGCTGGTGTGTC +
Preference number: 2 (lower is better)
Translates to: LSPGTHGSDSSHPRSLSSYPCRH*RRSWCV
Trigger: GACACACCAGCTCCTCCGTCAGTGTCTGCATGGGTA...GGAGGAGAGACTCCTAGGATGGCTGCTGTCTGAGCCATGAGTGCCAGGGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp CACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGATAAAGAGCCTGGAGAGGAAATaGAGAGGCCTCTCTCAGCCC +
Preference number: 2 (lower is better)
Translates to: HCLGERREGTKQAEGGIKSLERK*RGLSQP
Trigger: GGGCTGAGAGAGGCCTCTTCATTTCCTCTCCAGGCT...CTTTATCCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp TTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACGAACCGCCCTCTTGGTaGTCCACCAGGCCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: LGKNPIPTAWGKEGRAPNEPPSW*STRPEG
Trigger: TCCCTCTGGCCTGGTGGATCACCAAGAGGGCGGTTC...GTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp CACATCGAGCCACCATCCCAGCCACCGGGCTCGGAACATGGACACCAGAGATTTACACCCCAGCTCTCATaGCCATGGTGGAAGGGGGCT +
Preference number: 2 (lower is better)
Translates to: HIEPPSQPPGSEHGHQRFTPQLS*PWWKGA
Trigger: AGCCCCCTTCCACCATGGGCATGAGAGCTGGGGTGT...AAATCTCTGGTGTCCATGTTCCGAGCCCGGTGGCTGGGATGGTGGCTCGATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAAAATGAAGCTGAGACGTaGCCGCTCCTGCAGCAGGTG +
Preference number: 2 (lower is better)
Translates to: CPADTLRAARMGEILKQENEAET*PLLQQV
Trigger: CACCTGCTGCAGGAGCGGCCACGTCTCAGCTTCATT...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp ACAGATGTCAAAGATCCAAGCACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCACAGCCCTGGCACTCATaGCTCAGACAGCAGCCATCC +
Preference number: 2 (lower is better)
Translates to: TDVKDPSTGAAVSSGRPPQPWHS*LRQQPS
Trigger: GGATGGCTGCTGTCTGAGCCATGAGTGCCAGGGCTG...TGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTGCTTGGATCTTTGACATCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp GAAAGAGCAGGCCCAGAGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCGGCCTCTCTCAGCCCTaGCACTCATGGCTCAGACAG +
Preference number: 2 (lower is better)
Translates to: ERAGPEAWSSGTNELHMAGLSQP*HSWLRQ
Trigger: CTGTCTGAGCCATGAGTGCCAGGGCTGAGAGAGGCC...GGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCTCTGGGCCTGCTCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp AAGCACTTTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCAGTCCCCCGGAGAGGTaGGTGTGCAGGTCCCCAAAG +
Preference number: 2 (lower is better)
Translates to: KHFGKEPDTHCLGERREGSPPER*VCRSPK
Trigger: CTTTGGGGACCTGCACACCCACCTCTCCGGGGGACT...GCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp AGGCCAAAGGACCGTAGGAGCGGCCTGCACAGCCCCTCAGCAGGGTTACATGTAGCATGGGAGAGATCCTaGAGCAAGAATTGCGAGGCC +
Preference number: 2 (lower is better)
Translates to: RPKDRRSGLHSPSAGLHVAWERS*SKNCEA
Trigger: GGCCTCGCAATTCTTGCTTCAGGATCTCTCCCATGC...TACATGTAACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGTCCTTTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp AGGCCAAAGGACCGTAGGAGCGGCCTGCACAGCCCCTCAGCAGGGTTACATGTAGAGCCTGCTATCCCGTaGAAGTGGCACTGTGACCTT +
Preference number: 2 (lower is better)
Translates to: RPKDRRSGLHSPSAGLHVEPAIP*KWHCDL
Trigger: AAGGTCACAGTGCCACTTTCACGGGATAGCAGGCTC...TACATGTAACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGTCCTTTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp CACATCGAGCCACCATCCCAGCCACCGGGCTCGGAACATGGACACCAGAGATTTAGGGACGTCGCCACGTaGGCAGGCCATGGTATAATG +
Preference number: 2 (lower is better)
Translates to: HIEPPSQPPGSEHGHQRFRDVAT*AGHGIM
Trigger: CATTATACCATGGCCTGCGCACGTGGCGACGTCCCT...AAATCTCTGGTGTCCATGTTCCGAGCCCGGTGGCTGGGATGGTGGCTCGATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp AAGCACTTTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCCAGAGACCCCACTCCTaGAGCCTGCTACCCATGCAG +
Preference number: 2 (lower is better)
Translates to: KHFGKEPDTHCLGERREGQRPHS*SLLPMQ
Trigger: CTGCATGGGTAGCAGGCTGCAGGAGTGGGGTCTCTG...GCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp GGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGAGGAAACGCTGGGCACACTTCTaGTGCAGGCCCCAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: GLVGQTSFTWPLSSLERKRWAHF*CRPQPQ
Trigger: TTGGGGCTGGGGCCTGCAGCAGAAGTGTGCCCAGCG...TTTCCTCTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp CGGCACTTCCAAGCCCATCGGGAACCCACAGAAAGCCAAGGTAAAGTCAACTTCTTGCGAGGCCCCAGCTaGCCCCAGGGAGAGTGCACT +
Preference number: 2 (lower is better)
Translates to: RHFQAHREPTESQGKVNFLRGPS*PQGECT
Trigger: AGTGCACTCTCCCTGGGGGCAGCTGGGGCCTCGCAA...GAAGTTGACTTTACCTTGGCTTTCTGTGGGTTCCCGATGGGCTTGGAAGTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp TGCCCTCTCTGGCTGGGAAGAAGGAATTTCTCTCTTGCCTCCTTCCCCCAACAAACCGTAGGAGCGGCCTaGACAGCCCCTCAGCAGGGT +
Preference number: 2 (lower is better)
Translates to: CPLWLGRRNFSLASFPQQTVGAA*TAPQQG
Trigger: ACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGT...TTGTTGGGGGAAGGAGGCAAGAGAGAAATTCCTTCTTCCCAGCCAGAGAGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp TTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACGGAGCCGAGAAACGCTaGGCACACTTCTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: LGKNPIPTAWGKEGRAPNGAEKR*AHFCCR
Trigger: CCTGCAGCAGAAGTGTGCCCAGCGTTTCTCGGCTCC...GTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAACTCCTCCACAGCCAATaGAATGCAGAGACAGCCGAT +
Preference number: 2 (lower is better)
Translates to: CPADTLRAARMGEILKQELLHSQ*NAETAD
Trigger: ATCGGCTGTCTCTGCATTTCATTGGCTGTGGAGGAG...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp CACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGATAAAGGCTTCACATGGCCTCTaGGTAGCCTGGAGAGGAAAT +
Preference number: 2 (lower is better)
Translates to: HCLGERREGTKQAEGGIKASHGL*VAWRGN
Trigger: ATTTCCTCTCCAGGCTACTCAGAGGCCATGTGAAGC...CTTTATCCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp GTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTGTCTGGGGAGACGTGGCCGCTCCTaGAGCAGGTGCGCCGCCATG +
Preference number: 2 (lower is better)
Translates to: VSCFQGRWEQMLLKDCLGRRGRS*SRCAAM
Trigger: CATGGCGGCGCACCTGCTGCAGGAGCGGCCACGTCT...CCCCAGACAGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp CAAAGGGCCGTGGCATTCCCCTGGGGTGAGGTCCACGGCTTGGTCTTAACGTCTCACGTGCGCAGGCCATaGTATAATGAAGCTGAGACG +
Preference number: 2 (lower is better)
Translates to: QRAVAFPWGEVHGLVLTSHVRRP*YNEAET
Trigger: CGTCTCAGCTTCATTATACCATGGCCTGCGCACGTG...AGACGTTAAGACCAAGCCGTGGACCTCACCCCAGGGGAATGCCACGGCCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp ACCACGGTAAATAAAGCCAGTGTTACGGAGGACGAAGCACGCCCATCGCCTCTGGCAGGCCCAGAGGCCTaGTCTAGTGGGACAAACGAG +
Preference number: 2 (lower is better)
Translates to: TTVNKASVTEDEARPSPLAGPEA*SSGTNE
Trigger: CTCGTTTGTCCCACTAGACCAGGCCTCTGGGCCTGC...CAGAGGCGATGGGCGTGCTTCGTCCTCCGTAACACTGGCTTTATTTACCGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp CAAAGGGCCGTGGCATTCCCCTGGGGTGAGGTCCACGGCTTGGTCTTAACGTCTGGTGGAAGGGGGCTGTaGAGGCATTTTCTAAACACC +
Preference number: 2 (lower is better)
Translates to: QRAVAFPWGEVHGLVLTSGGRGL*RHFLNT
Trigger: GGTGTTTAGAAAATGCCTCCACAGCCCCCTTCCACC...AGACGTTAAGACCAAGCCGTGGACCTCACCCCAGGGGAATGCCACGGCCCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp CACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGATAAAGGGTGGAAGGGGGCTGTaGAGGCATTTTCTAAACACC +
Preference number: 2 (lower is better)
Translates to: HCLGERREGTKQAEGGIKGGRGL*RHFLNT
Trigger: GGTGTTTAGAAAATGCCTCCACAGCCCCCTTCCACC...CTTTATCCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp AAGCACTTTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCTTAGAGGTCAGGGCCTaGGACTCTGAACCACCACGG +
Preference number: 2 (lower is better)
Translates to: KHFGKEPDTHCLGERREGLEVRA*DSEPPR
Trigger: CCGTGGTGGTTCAGAGTCCCAGGCCCTGACCTCTAA...GCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp GAAAGAGCAGGCCCAGAGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCCCAGAGGTCCCCTTCTaGTTCAACTGGGACATCCAA +
Preference number: 2 (lower is better)
Translates to: ERAGPEAWSSGTNELHMAPEVPF*FNWDIQ
Trigger: TTGGATGTCCCAGTTGAATCAGAAGGGGACCTCTGG...GGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCTCTGGGCCTGCTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp ACAGATGTCAAAGATCCAAGCACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCACCAGAGGTCCCCTTCTaGTTCAACTGGGACATCCAA +
Preference number: 2 (lower is better)
Translates to: TDVKDPSTGAAVSSGRPPPEVPF*FNWDIQ
Trigger: TTGGATGTCCCAGTTGAATCAGAAGGGGACCTCTGG...TGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTGCTTGGATCTTTGACATCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp GTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTGTCTGGGGAGAGTCCAGGGACCCTaGGCGCCCAGGAGAGAGGTG +
Preference number: 2 (lower is better)
Translates to: VSCFQGRWEQMLLKDCLGRVQGP*APRREV
Trigger: CACCTCTCTCCTGGGCGCTCAGGGTCCCTGGACTCT...CCCCAGACAGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp GAAAGAGCAGGCCCAGAGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCCTCCTCCACAGCCAATaGAATGCAGAGACAGCCGAT +
Preference number: 2 (lower is better)
Translates to: ERAGPEAWSSGTNELHMALLHSQ*NAETAD
Trigger: ATCGGCTGTCTCTGCATTTCATTGGCTGTGGAGGAG...GGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCTCTGGGCCTGCTCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp AAGCACTTTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCGCATGGGAGAGATCCTaGAGCAAGAATTGCGAGGCC +
Preference number: 2 (lower is better)
Translates to: KHFGKEPDTHCLGERREGAWERS*SKNCEA
Trigger: GGCCTCGCAATTCTTGCTTCAGGATCTCTCCCATGC...GCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp CACATCGAGCCACCATCCCAGCCACCGGGCTCGGAACATGGACACCAGAGATTTCCACAGCCAATGAAATaGAGAGACAGCCGATGGCCT +
Preference number: 2 (lower is better)
Translates to: HIEPPSQPPGSEHGHQRFPQPMK*RDSRWP
Trigger: AGGCCATCGGCTGTCTCTGCATTTCATTGGCTGTGG...AAATCTCTGGTGTCCATGTTCCGAGCCCGGTGGCTGGGATGGTGGCTCGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp TGCCCTCTCTGGCTGGGAAGAAGGAATTTCTCTCTTGCCTCCTTCCCCCAACAAGGCAGGACACTGACATaGTGGATGCGCCTGCCCTGT +
Preference number: 2 (lower is better)
Translates to: CPLWLGRRNFSLASFPQQGRTLT*WMRLPC
Trigger: ACAGGGCAGGCGCATCCAGCATGTCAGTGTCCTGCC...TTGTTGGGGGAAGGAGGCAAGAGAGAAATTCCTTCTTCCCAGCCAGAGAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp GGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGAGGAAACAGCCCTGGCACTCATaGCTCAGACAGCAGCCATCC +
Preference number: 2 (lower is better)
Translates to: GLVGQTSFTWPLSSLERKQPWHS*LRQQPS
Trigger: GGATGGCTGCTGTCTGAGCCATGAGTGCCAGGGCTG...TTTCCTCTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp ACAGATGTCAAAGATCCAAGCACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCACAAACGAGCTTCACATaGCCTCTGAGTAGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: TDVKDPSTGAAVSSGRPPQTSFT*PLSSLE
Trigger: CTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTG...TGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTGCTTGGATCTTTGACATCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp CGGCACTTCCAAGCCCATCGGGAACCCACAGAAAGCCAAGGTAAAGTCAACTTCAGGAGTGACCTCCCTTaGCCTCAGGGCCCCTTGTCA +
Preference number: 2 (lower is better)
Translates to: RHFQAHREPTESQGKVNFRSDLP*PQGPLS
Trigger: TGACAAGGGGCCCTGAGGCCAAGGGAGGTCACTCCT...GAAGTTGACTTTACCTTGGCTTTCTGTGGGTTCCCGATGGGCTTGGAAGTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp AAGCACTTTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCATAGGCTGCCCGCCCTaGGCAAATAAACACACCCAT +
Preference number: 2 (lower is better)
Translates to: KHFGKEPDTHCLGERREGIGCPP*ANKHTH
Trigger: ATGGGTGTGTTTATTTGCTCAGGGCGGGCAGCCTAT...GCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp TTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACCAGGGCCTGGGACTCTaGACCACCACGGTAAATAAA +
Preference number: 2 (lower is better)
Translates to: LGKNPIPTAWGKEGRAPNQGLGL*TTTVNK
Trigger: TTTATTTACCGTGGTGGTTCAGAGTCCCAGGCCCTG...GTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp GAAAGAGCAGGCCCAGAGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCGATCACAACTCATTCTaGAGAGATAGCCCTCGGCAG +
Preference number: 2 (lower is better)
Translates to: ERAGPEAWSSGTNELHMADHNSF*RDSPRQ
Trigger: CTGCCGAGGGCTATCTCTGCAGAATGAGTTGTGATC...GGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCTCTGGGCCTGCTCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp TTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGTGGAAACGCGCCCTaGTACCTGAGAAGACATAGG +
Preference number: 2 (lower is better)
Translates to: LGKNPIPTAWGKEGRAPNSGNAP*YLRRHR
Trigger: CCTATGTCTTCTCAGGTAGCAGGGCGCGTTTCCACT...GTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp TTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACCCACAGCCAATGAAATaGAGAGACAGCCGATGGCCT +
Preference number: 2 (lower is better)
Translates to: LGKNPIPTAWGKEGRAPNPQPMK*RDSRWP
Trigger: AGGCCATCGGCTGTCTCTGCATTTCATTGGCTGTGG...GTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp TTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACCAAACGAGCTTCACATaGCCTCTGAGTAGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: LGKNPIPTAWGKEGRAPNQTSFT*PLSSLE
Trigger: CTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTG...GTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp GAGCTGGTGTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTAAGTCTCCACGCGTGTaGGGGGTTACAGGGAGCCCC +
Preference number: 2 (lower is better)
Translates to: ELVCPASKEDGNRCYSKTKSPRV*GVTGSP
Trigger: GGGGCTCCCTGTAACCCCTCACACGCGTGGAGACTT...AGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp TGCCCTCTCTGGCTGGGAAGAAGGAATTTCTCTCTTGCCTCCTTCCCCCAACAAGAGCCTGCTATCCCGTaGAAGTGGCACTGTGACCTT +
Preference number: 2 (lower is better)
Translates to: CPLWLGRRNFSLASFPQQEPAIP*KWHCDL
Trigger: AAGGTCACAGTGCCACTTTCACGGGATAGCAGGCTC...TTGTTGGGGGAAGGAGGCAAGAGAGAAATTCCTTCTTCCCAGCCAGAGAGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CAA 90 bp AGTGCCCCCTCCAACCTCAGAAGCCAGACAGGAAAACCTCTTCCTTaGGCCAAGGGTAAGAGTTACCCAGGTCCTCCACAAAGTTGCCAT +
Preference number: 2 (lower is better)
Translates to: SAPSNLRSQTGKPLP*AKGKSYPGPPQSCH
Trigger: ATGGCAACTTTGTGGAGGACCTGGGTAACTCTTACCCTTGGCCAAAGGAAGAGGTTTTCCTGTCTGGCTTCTGAGGTTGGAGGGGGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp CGGCACTTCCAAGCCCATCGGGAACCCACAGAAAGCCAAGGTAAAGTCAACTTCATAGGCTGCCCGCCCTaGGCAAATAAACACACCCAT +
Preference number: 2 (lower is better)
Translates to: RHFQAHREPTESQGKVNFIGCPP*ANKHTH
Trigger: ATGGGTGTGTTTATTTGCTCAGGGCGGGCAGCCTAT...GAAGTTGACTTTACCTTGGCTTTCTGTGGGTTCCCGATGGGCTTGGAAGTGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp CGGCACTTCCAAGCCCATCGGGAACCCACAGAAAGCCAAGGTAAAGTCAACTTCGGAGCTGGTGTGTCCTaGTTCCAAGGAAGATGGGAA +
Preference number: 2 (lower is better)
Translates to: RHFQAHREPTESQGKVNFGAGVS*FQGRWE
Trigger: TTCCCATCTTCCTTGGAAGCAGGACACACCAGCTCC...GAAGTTGACTTTACCTTGGCTTTCTGTGGGTTCCCGATGGGCTTGGAAGTGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp TGCCCTCTCTGGCTGGGAAGAAGGAATTTCTCTCTTGCCTCCTTCCCCCAACAACAGACACACCTTAAGTaGAAACGCGCCCTGCTACCT +
Preference number: 2 (lower is better)
Translates to: CPLWLGRRNFSLASFPQQQTHLK*KRALLP
Trigger: AGGTAGCAGGGCGCGTTTCCACTTAAGGTGTGTCTG...TTGTTGGGGGAAGGAGGCAAGAGAGAAATTCCTTCTTCCCAGCCAGAGAGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp CGGCACTTCCAAGCCCATCGGGAACCCACAGAAAGCCAAGGTAAAGTCAACTTCAAAGTCCCAAGAGCCTaGTATCCCGTGAAAGTGGCA +
Preference number: 2 (lower is better)
Translates to: RHFQAHREPTESQGKVNFKVPRA*YPVKVA
Trigger: TGCCACTTTCACGGGATAGCAGGCTCTTGGGACTTT...GAAGTTGACTTTACCTTGGCTTTCTGTGGGTTCCCGATGGGCTTGGAAGTGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAATGCTTCCAAGGAAGATaGGAACAGATGTTACTCAAA +
Preference number: 2 (lower is better)
Translates to: CPADTLRAARMGEILKQECFQGR*EQMLLK
Trigger: TTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCA...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp TGCCCTCTCTGGCTGGGAAGAAGGAATTTCTCTCTTGCCTCCTTCCCCCAACAAAGACTGGACATTGGGTaGAAAGAAAGAGCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: CPLWLGRRNFSLASFPQQRLDIG*KERAGP
Trigger: TGGGCCTGCTCTTTCTTTCCACCCAATGTCCAGTCT...TTGTTGGGGGAAGGAGGCAAGAGAGAAATTCCTTCTTCCCAGCCAGAGAGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp GATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGGTGAAAGTGTGTACATaGTTTTTAGAGAACCACAAA +
Preference number: 2 (lower is better)
Translates to: DTHCLGERREGTKQAEGGVKVCT*FLENHK
Trigger: TTTGTGGTTCTCTAAAAACCATGTACACACTTTCAC...CCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CAA 90 bp ATTTCGAAAAGAGTCCAGCAGCCACACTCTTTCCAAGTAAGCACTTaGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGG +
Preference number: 2 (lower is better)
Translates to: ISKRVQQPHSFQVST*GKNPIPTAWGKEGR
Trigger: CCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTTACTTGGAAAGAGTGTGGCTGCTGGACTCTTTTCGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR TCA 90 bp CGGCACTTCCAAGCCCATCGGGAACCCACAGAAAGCCAAGGTAAAGTCAACTTCCTAGCCTCCAGTGACTaGCAGATGTCAAAGATCCAA +
Preference number: 2 (lower is better)
Translates to: RHFQAHREPTESQGKVNFLASSD*QMSKIQ
Trigger: TTGGATCTTTGACATCTGTCAGTCACTGGAGGCTAG...GAAGTTGACTTTACCTTGGCTTTCTGTGGGTTCCCGATGGGCTTGGAAGTGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp GTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTGTCTGGGGCACGTGCGCAGGCCATaGTATAATGAAGCTGAGACG +
Preference number: 2 (lower is better)
Translates to: VSCFQGRWEQMLLKDCLGHVRRP*YNEAET
Trigger: CGTCTCAGCTTCATTATACCATGGCCTGCGCACGTG...CCCCAGACAGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR GCA 90 bp GAGCTGGTGTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTAGTGGAAACGCGCCCTaGTACCTGAGAAGACATAGG +
Preference number: 2 (lower is better)
Translates to: ELVCPASKEDGNRCYSKTSGNAP*YLRRHR
Trigger: CCTATGTCTTCTCAGGTAGCAGGGCGCGTTTCCACT...AGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CCA 90 bp GAGCTGGTGTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTCAGACACACCTTAAGTaGAAACGCGCCCTGCTACCT +
Preference number: 2 (lower is better)
Translates to: ELVCPASKEDGNRCYSKTQTHLK*KRALLP
Trigger: AGGTAGCAGGGCGCGTTTCCACTTAAGGTGTGTCTG...AGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR GCA 72 bp CACCAGGCCAGAGGGAGCGTGCCCGGGAGGGAGAGCTaGCCGGGGCAGGACACTGACATGCTGGATGCGCCT +
Preference number: 3 (lower is better)
Translates to: HQARGSVPGRES*PGQDTDMLDAP
Trigger: AGGCGCATCCAGCATGTCAGTGTCCTGCCCCGGGCAGCTCTCCCTCCCGGGCACGCTCCCTCTGGCCTGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 72 bp CGTGCCCGGGAGGGAGAGCTGCCCGGGGCAGGACACTaGCATGCTGGATGCGCCTGCCCTGTGTGGTTACAA +
Preference number: 3 (lower is better)
Translates to: RAREGELPGAGH*HAGCACPVWLQ
Trigger: TTGTAACCACACAGGGCAGGCGCATCCAGCATGTCAGTGTCCTGCCCCGGGCAGCTCTCCCTCCCGGGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 72 bp CTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTaGAGCAAGAATTGCGAGGCCCCAGCTGCCCCCAGG +
Preference number: 3 (lower is better)
Translates to: LTPSGQLAWERS*SKNCEAPAAPR
Trigger: CCTGGGGGCAGCTGGGGCCTCGCAATTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR GCA 72 bp GGCCATGGTATAATGAAGCTGAGACGTGGCCGCTCCTaGAGCAGGTGCGCCGCCATGCGCCCACGACGAGTC +
Preference number: 3 (lower is better)
Translates to: GHGIMKLRRGRS*SRCAAMRPRRV
Trigger: GACTCGTCGTGGGCGCATGGCGGCGCACCTGCTGCAGGAGCGGCCACGTCTCAGCTTCATTATACCATGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CCA 72 bp CTGGCCCCTCAGGGACGTCGCCACGTGCGCAGGCCATaGTATAATGAAGCTGAGACGTGGCCGCTCCTGCAG +
Preference number: 3 (lower is better)
Translates to: LAPQGRRHVRRP*YNEAETWPLLQ
Trigger: CTGCAGGAGCGGCCACGTCTCAGCTTCATTATACCATGGCCTGCGCACGTGGCGACGTCCCTGAGGGGCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR GCA 72 bp CAAGCCCCATCCCAGGCTGTGCAGAGACCCCACTCCTaGAGCCTGCTACCCATGCAGACACTGACGGAGGAG +
Preference number: 3 (lower is better)
Translates to: QAPSQAVQRPHS*SLLPMQTLTEE
Trigger: CTCCTCCGTCAGTGTCTGCATGGGTAGCAGGCTGCAGGAGTGGGGTCTCTGCACAGCCTGGGATGGGGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR GCA 72 bp CCGGGAGGGAGAGCTGCCCGGGGCAGGACACTGACATaGTGGATGCGCCTGCCCTGTGTGGTTACAATAGAG +
Preference number: 3 (lower is better)
Translates to: PGGRAARGRTLT*WMRLPCVVTIE
Trigger: CTCTATTGTAACCACACAGGGCAGGCGCATCCAGCATGTCAGTGTCCTGCCCCGGGCAGCTCTCCCTCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CAA 90 bp GATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGATCCTGAAGCAAGAATaGCGAGGCCCCAGCTGCCCC +
Preference number: 3 (lower is better)
Translates to: DTHCLGERREGTKQAEGGILKQE*RGPSCP
Trigger: GGGGCAGCTGGGGCCTCGCAATTCTTGCTTCAGGAT...CCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CAA 90 bp CACATCGAGCCACCATCCCAGCCACCGGGCTCGGAACATGGACACCAGAGATTTTGGCCTCAGGGCCCCTaGTCAAGTCCCCCGGAGAGG +
Preference number: 3 (lower is better)
Translates to: HIEPPSQPPGSEHGHQRFWPQGP*SSPPER
Trigger: CCTCTCCGGGGGACTTGACAAGGGGCCCTGAGGCCA...AAATCTCTGGTGTCCATGTTCCGAGCCCGGTGGCTGGGATGGTGGCTCGATGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 72 bp ACCCATCTACGCAGATTCTCTTGCGTTCCCCACCAGTaGGGAGACTGGCCCCTCAGGGACGTCGCCACGTGC +
Preference number: 3 (lower is better)
Translates to: THLRRFSCVPHQ*GDWPLRDVATC
Trigger: GCACGTGGCGACGTCCCTGAGGGGCCAGTCTCCTCACTGGTGGGGAACGCAAGAGAATCTGCGTAGATGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CCA 72 bp GGGTGTGCAGGTCCCCAAAGGGCCGTGGCATTCCCCTaGGGTGAGGTCCACGGCTTGGTCTTAACGTCTGTT +
Preference number: 3 (lower is better)
Translates to: GCAGPQRAVAFP*GEVHGLVLTSV
Trigger: AACAGACGTTAAGACCAAGCCGTGGACCTCACCCCAGGGGAATGCCACGGCCCTTTGGGGACCTGCACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CCA 72 bp CTCCTTCCCCCAACAAAGGTAAAGAGAGGGGCCCGCTaGAATGCCAGCTCCCAGGGAAGGACACAGAGCCCC +
Preference number: 3 (lower is better)
Translates to: LLPPTKVKRGAR*NASSQGRTQSP
Trigger: GGGGCTCTGTGTCCTTCCCTGGGAGCTGGCATTCCAGCGGGCCCCTCTCTTTACCTTTGTTGGGGGAAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR GCA 72 bp ATAATGAAGCTGAGACGTGGCCGCTCCTGCAGCAGGTaGGCCGCCATGCGCCCACGACGAGTCATAAGTCTC +
Preference number: 3 (lower is better)
Translates to: IMKLRRGRSCSR*AAMRPRRVISL
Trigger: GAGACTTATGACTCGTCGTGGGCGCATGGCGGCGCACCTGCTGCAGGAGCGGCCACGTCTCAGCTTCATTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CAA 90 bp GATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGGGTGAGGTCCACGGCTaGGTCTTAACGTCTGTTATG +
Preference number: 3 (lower is better)
Translates to: DTHCLGERREGTKQAEGGGEVHG*VLTSVM
Trigger: CATAACAGACGTTAAGACCAAGCCGTGGACCTCACC...CCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 72 bp GACCTTGGTGACTCTAGACTAGGTGTCTTGCCCTGCTaGCACCCTCCGGGCAGCTCGCATGGGAGAGATCCT +
Preference number: 3 (lower is better)
Translates to: DLGDSRLGVLPC*HPPGSSHGRDP
Trigger: AGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCAAGACACCTAGTCTAGAGTCACCAAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 72 bp CGCCTCTGTCTCCTCTTCACCATAGGCTGCCCGCCCTaGGCAAATAAACACACCCATCTCAGGGGTGTCCCA +
Preference number: 3 (lower is better)
Translates to: RLCLLFTIGCPP*ANKHTHLRGVP
Trigger: TGGGACACCCCTGAGATGGGTGTGTTTATTTGCTCAGGGCGGGCAGCCTATGGTGAAGAGGAGACAGAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 72 bp GGGAGCCGAGGAGACTCCCATTCCCTCGACAGAAACTaGGCAGGCACCAACCCTCTCCTGCAAGCATGGATT +
Preference number: 3 (lower is better)
Translates to: GSRGDSHSLDRN*AGTNPLLQAWI
Trigger: AATCCATGCTTGCAGGAGAGGGTTGGTGCCTGCTCAGTTTCTGTCGAGGGAATGGGAGTCTCCTCGGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CCA 72 bp GCCAATGGGCTACGGTCTGCTTCTGCCCTCTCTGGCTaGGAAGAAGGAATTTCTCTCTTGCCTCCTTCCCCC +
Preference number: 3 (lower is better)
Translates to: ANGLRSASALSG*EEGISLLPPSP
Trigger: GGGGGAAGGAGGCAAGAGAGAAATTCCTTCTTCCCAGCCAGAGAGGGCAGAAGCAGACCGTAGCCCATTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 72 bp AGCTTCACATGGCCTCTGAGTAGCCTGGAGAGGAAATaGAGAGGCCTCTCTCAGCCCTGGCACTCATGGCTC +
Preference number: 3 (lower is better)
Translates to: SFTWPLSSLERK*RGLSQPWHSWL
Trigger: GAGCCATGAGTGCCAGGGCTGAGAGAGGCCTCTTCATTTCCTCTCCAGGCTACTCAGAGGCCATGTGAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CAA 90 bp CACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGATAAAGATCCAAGACTGGACATaGGGTGGAAAGAAAGAGCAG +
Preference number: 3 (lower is better)
Translates to: HCLGERREGTKQAEGGIKIQDWT*GGKKEQ
Trigger: CTGCTCTTTCTTTCCACCCAATGTCCAGTCTTGGAT...CTTTATCCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR GCA 72 bp CCAAGTAAGCACTTTGGGAAAGAACCCGATACCCACTaGCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCA +
Preference number: 3 (lower is better)
Translates to: PSKHFGKEPDTH*LGERREGTKQA
Trigger: TGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTTACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CAA 90 bp ACAGATGTCAAAGATCCAAGCACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCATTCCAAGTAAGCACTTaGGGAAAGAACCCGATACCC +
Preference number: 3 (lower is better)
Translates to: TDVKDPSTGAAVSSGRPPFQVST*GKNPIP
Trigger: GGGTATCGGGTTCTTTCCCAAAGTGCTTACTTGGAA...TGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTGCTTGGATCTTTGACATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CCA 72 bp GACGGAGGAGCTGGTGTGTCCTGCTTCCAAGGAAGATaGGAACAGATGTTACTCAAAGACTGTCTGGGGAGA +
Preference number: 3 (lower is better)
Translates to: DGGAGVSCFQGR*EQMLLKDCLGR
Trigger: TCTCCCCAGACAGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTCCTCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CAA 90 bp GTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTGTCTGGGGTCTACGCAGATTCTCTaGCGTTCCCCACCAGTGAGG +
Preference number: 3 (lower is better)
Translates to: VSCFQGRWEQMLLKDCLGSTQIL*RSPPVR
Trigger: CCTCACTGGTGGGGAACGCAAGAGAATCTGCGTAGA...CCCCAGACAGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR-3UTR CAA 90 bp CGGCACTTCCAAGCCCATCGGGAACCCACAGAAAGCCAAGGTAAAGTCAACTTCATCCAAGACTGGACATaGGGTGGAAAGAAAGAGCAG +
Preference number: 3 (lower is better)
Translates to: RHFQAHREPTESQGKVNFIQDWT*GGKKEQ
Trigger: CTGCTCTTTCTTTCCACCCAATGTCCAGTCTTGGAT...GAAGTTGACTTTACCTTGGCTTTCTGTGGGTTCCCGATGGGCTTGGAAGTGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR GCA 72 bp GTGCGTGACAGACACACCTTAAGTGGAAACGCGCCCTaGTACCTGAGAAGACATAGGGTGACAATGATCACA +
Preference number: 3 (lower is better)
Translates to: VRDRHTLSGNAP*YLRRHRVTMIT
Trigger: TGTGATCATTGTCACCCTATGTCTTCTCAGGTAGCAGGGCGCGTTTCCACTTAAGGTGTGTCTGTCACGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR GCA 72 bp ACCCATGCAGACACTGACGGAGGAGCTGGTGTGTCCTaGTTCCAAGGAAGATGGGAACAGATGTTACTCAAA +
Preference number: 3 (lower is better)
Translates to: THADTDGGAGVS*FQGRWEQMLLK
Trigger: TTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTCCTCCGTCAGTGTCTGCATGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR GCA 72 bp GGTTACATGTACCCAGACTTAAGGTTCACTGCTAAGTaGCCCCTCCAACCTCAGAAGCCAGACAGGAAAACC +
Preference number: 3 (lower is better)
Translates to: GYMYPDLRFTAK*PLQPQKPDRKT
Trigger: GGTTTTCCTGTCTGGCTTCTGAGGTTGGAGGGGGCACTTAGCAGTGAACCTTAAGTCTGGGTACATGTAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CCA 72 bp CCAACCTCAGAAGCCAGACAGGAAAACCTCTTCCTTTaGCCAAGGGTAAGAGTTACCCAGGTCCTCCACAAA +
Preference number: 3 (lower is better)
Translates to: PTSEARQENLFL*PRVRVTQVLHK
Trigger: TTTGTGGAGGACCTGGGTAACTCTTACCCTTGGCCAAAGGAAGAGGTTTTCCTGTCTGGCTTCTGAGGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 72 bp CAGATGTTAAAGGAGCTCTGGAGTAGAGCTTTGCCATaGAAACCAGATGCTCCTCGGCCCTTTGCGTTCCAA +
Preference number: 3 (lower is better)
Translates to: QMLKELWSRALP*KPDAPRPFAFQ
Trigger: TTGGAACGCAAAGGGCCGAGGAGCATCTGGTTTTCATGGCAAAGCTCTACTCCAGAGCTCCTTTAACATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 72 bp GAAAGCCAAGGTAAAGTCAACTTCTCTAGCCTCCAGTaGCTGACAGATGTCAAAGATCCAAGCACAGGAGCC +
Preference number: 3 (lower is better)
Translates to: ESQGKVNFSSLQ*LTDVKDPSTGA
Trigger: GGCTCCTGTGCTTGGATCTTTGACATCTGTCAGTCACTGGAGGCTAGAGAAGTTGACTTTACCTTGGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR TCA 72 bp CTCCCTCTCTCTAAATGCACACGTTCCTCCATCAGATaGGACATTTATAATATGAATATTCTTGCAAAGTTC +
Preference number: 3 (lower is better)
Translates to: LPLSKCTRSSIR*DIYNMNILAKF
Trigger: GAACTTTGCAAGAATATTCATATTATAAATGTCTCATCTGATGGAGGAACGTGTGCATTTAGAGAGAGGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp CACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAAGAAGCAGAGGGCCCAGGAGGATGGGCCGGAGCCGTaGGACCCGCTGCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: HRSRSLQRSASKKQRAQEDGPEP*DPLQLP
Trigger: CGGCAGCTGCAGCGGGTCGCACGGCTCCGGCCCATC...CTCCTGGGCCCTCTGCTTCTTGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266304.9
CDS-3UTR GCA 90 bp CCTCCCTTGGCCTCAGGGCCCCTTGTCAAGTCCCCCGGAGAGGTGGGTGTGCAGCCGCGTCGGACATCGTaGCCCGGACTCGGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: PPLASGPLVKSPGEVGVQPRRTS*PGLGSR
Trigger: GCGCGAGCCGAGTCCGGGGCACGATGTCCGACGCGG...CTGCACACCCACCTCTCCGGGGGACTTGACAAGGGGCCCTGAGGCCAAGGGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266304.9
CDS-3UTR TCA 90 bp CACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAAGAAGCAGAGGGCCCAGGAGGCGCCGGGCATCCCGTaGCCGTTTAGCTGCCACGTT +
Preference number: 4 (lower is better)
Translates to: HRSRSLQRSASKKQRAQEAPGIP*PFSCHV
Trigger: AACGTGGCAGCTAAACGGTCACGGGATGCCCGGCGC...CTCCTGGGCCCTCTGCTTCTTGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCGCGGGGTGGGAGCCTTaGGGCAGCCAATGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPAGWEP*GSQWPA
Trigger: TGCTGGCCATTGGCTGCCTCAAGGCTCCCACCCCGC...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406644.7
CDS-3UTR GCA 90 bp CACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAAGAAGCAGAGGGCCCAGGAGCCGGAGAGGTGGGTGTaGAGGTCCCCAAAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: HRSRSLQRSASKKQRAQEPERWV*RSPKGR
Trigger: ACGGCCCTTTGGGGACCTGCACACCCACCTCTCCGG...CTCCTGGGCCCTCTGCTTCTTGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAAGAAGCAGAGGGCCCAGGAGAGGCTGAGACAGCCATaGTGCTGGCGGCTGCGGCCT +
Preference number: 4 (lower is better)
Translates to: HRSRSLQRSASKKQRAQERLRQP*CWRLRP
Trigger: AGGCCGCAGCCGCCAGCACCATGGCTGTCTCAGCCT...CTCCTGGGCCCTCTGCTTCTTGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CAA 72 bp GGAGGGAGGAGTGACCTCCCTTGGCCTCAGGGCCCCTaGTCAAGTCCCCCGGAGAGGTGGGTGTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GGRSDLPWPQGP*SSPPERWVCRS
Trigger: GGACCTGCACACCCACCTCTCCGGGGGACTTGACAAGGGGCCCTGAGGCCAAGGGAGGTCACTCCTCCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCAGAGTCCAGGGACCCTaGGCGCCCAGGAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPRVQGP*APRREV
Trigger: CACCTCTCTCCTGGGCGCTCAGGGTCCCTGGACTCT...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCCCGGAGAGGTGGGTGTaGAGGTCCCCAAAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPPERWV*RSPKGR
Trigger: ACGGCCCTTTGGGGACCTGCACACCCACCTCTCCGG...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp CAGGGACGTCGCCACGTGCGCAGGCCATGGTATAATGAAGCTGAGACGTGGCCGCCCGGGAGGGAGAGCTaGCCGGGGCAGGACACTGAC +
Preference number: 4 (lower is better)
Translates to: QGRRHVRRPWYNEAETWPPGRES*PGQDTD
Trigger: GTCAGTGTCCTGCCCCGGGCAGCTCTCCCTCCCGGG...CGGCCACGTCTCAGCTTCATTATACCATGGCCTGCGCACGTGGCGACGTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp CAGGGACGTCGCCACGTGCGCAGGCCATGGTATAATGAAGCTGAGACGTGGCCGAGGCCAGAGGGAGCGTaGCCGGGAGGGAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QGRRHVRRPWYNEAETWPRPEGA*PGGRAA
Trigger: GGCAGCTCTCCCTCCCGGGCACGCTCCCTCTGGCCT...CGGCCACGTCTCAGCTTCATTATACCATGGCCTGCGCACGTGGCGACGTCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCAGGGGCCCGCTGGAATaGCAGCTCCCAGGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPRGPLE*QLPGKD
Trigger: GTCCTTCCCTGGGAGCTGGCATTCCAGCGGGCCCCT...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAAAGCCGTGCGACCCGCTaGAGCTGCCGACACGGGCAG +
Preference number: 4 (lower is better)
Translates to: CPADTLRAARMGEILKQESRATR*SCRHGQ
Trigger: CTGCCCGTGTCGGCAGCTGCAGCGGGTCGCACGGCT...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266304.9
CDS-3UTR GCA 90 bp CAAAGGGCCGTGGCATTCCCCTGGGGTGAGGTCCACGGCTTGGTCTTAACGTCTGGACCGGGTCCTGCCTaGGGGTCCACAGGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: QRAVAFPWGEVHGLVLTSGPGPA*GSTGGF
Trigger: GAAGCCGCCTGTGGACCCGCAGGCAGGACCCGGTCC...AGACGTTAAGACCAAGCCGTGGACCTCACCCCAGGGGAATGCCACGGCCCTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266304.9
CDS-3UTR GCA 90 bp GATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGCGCTGGGCACACTTCTaGTGCAGGCCCCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: DTHCLGERREGTKQAEGGRWAHF*CRPQPQ
Trigger: TTGGGGCTGGGGCCTGCAGCAGAAGTGTGCCCAGCG...CCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp CCTCCCTTGGCCTCAGGGCCCCTTGTCAAGTCCCCCGGAGAGGTGGGTGTGCAGGGCAGGACACTGACATaGTGGATGCGCCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PPLASGPLVKSPGEVGVQGRTLT*WMRLPC
Trigger: ACAGGGCAGGCGCATCCAGCATGTCAGTGTCCTGCC...CTGCACACCCACCTCTCCGGGGGACTTGACAAGGGGCCCTGAGGCCAAGGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp AGGCCAAAGGACCGTAGGAGCGGCCTGCACAGCCCCTCAGCAGGGTTACATGTACCCGGGAGGGAGAGCTaGCCGGGGCAGGACACTGAC +
Preference number: 4 (lower is better)
Translates to: RPKDRRSGLHSPSAGLHVPGRES*PGQDTD
Trigger: GTCAGTGTCCTGCCCCGGGCAGCTCTCCCTCCCGGG...TACATGTAACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGTCCTTTGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp GATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGAGGGGCCCGCTGGAATaGCAGCTCCCAGGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: DTHCLGERREGTKQAEGGRGPLE*QLPGKD
Trigger: GTCCTTCCCTGGGAGCTGGCATTCCAGCGGGCCCCT...CCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CCTCCCTTGGCCTCAGGGCCCCTTGTCAAGTCCCCCGGAGAGGTGGGTGTGCAGCAGCCCTGGCACTCATaGCTCAGACAGCAGCCATCC +
Preference number: 4 (lower is better)
Translates to: PPLASGPLVKSPGEVGVQQPWHS*LRQQPS
Trigger: GGATGGCTGCTGTCTGAGCCATGAGTGCCAGGGCTG...CTGCACACCCACCTCTCCGGGGGACTTGACAAGGGGCCCTGAGGCCAAGGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CAAAGGGCCGTGGCATTCCCCTGGGGTGAGGTCCACGGCTTGGTCTTAACGTCTCCCCAGGCAGAGGTCTaGGGTGCAGGCAGTACCCCG +
Preference number: 4 (lower is better)
Translates to: QRAVAFPWGEVHGLVLTSPQAEV*GAGSTP
Trigger: CGGGGTACTGCCTGCACCTCAGACCTCTGCCTGGGG...AGACGTTAAGACCAAGCCGTGGACCTCACCCCAGGGGAATGCCACGGCCCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAACCCCAGGCAGAGGTCTaGGGTGCAGGCAGTACCCCG +
Preference number: 4 (lower is better)
Translates to: CPADTLRAARMGEILKQEPQAEV*GAGSTP
Trigger: CGGGGTACTGCCTGCACCTCAGACCTCTGCCTGGGG...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAAGGTGTCTTGCCCTGCTaGCACCCTCCGGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: CPADTLRAARMGEILKQEGVLPC*HPPGSS
Trigger: CGAGCTGCCCGGAGGGTGTCAGCAGGGCAAGACACC...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp AGGCCAAAGGACCGTAGGAGCGGCCTGCACAGCCCCTCAGCAGGGTTACATGTACCCGGGGCAGGACACTaGCATGCTGGATGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: RPKDRRSGLHSPSAGLHVPGAGH*HAGCAC
Trigger: GCAGGCGCATCCAGCATGTCAGTGTCCTGCCCCGGG...TACATGTAACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGTCCTTTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAAGGCAGAGGTCTGAGGTaGAGGCAGTACCCCGCCCGG +
Preference number: 4 (lower is better)
Translates to: CPADTLRAARMGEILKQEGRGLR*RQYPAR
Trigger: CCGGGCGGGGTACTGCCTGCACCTCAGACCTCTGCC...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp CACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGATAAAGAGACGTGGCCGCTCCTaGAGCAGGTGCGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: HCLGERREGTKQAEGGIKRRGRS*SRCAAM
Trigger: CATGGCGGCGCACCTGCTGCAGGAGCGGCCACGTCT...CTTTATCCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCACACCCCAGCTCTCATaGCCATGGTGGAAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPTPQLS*PWWKGA
Trigger: AGCCCCCTTCCACCATGGGCATGAGAGCTGGGGTGT...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp CACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAAGAAGCAGAGGGCCCAGGAGCAATGGGCTACGGTCTaGTTCTGCCCTCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: HRSRSLQRSASKKQRAQEQWATV*FCPLWL
Trigger: CAGCCAGAGAGGGCAGAAGCAGACCGTAGCCCATTG...CTCCTGGGCCCTCTGCTTCTTGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCCAGCTCTCATGCCCATaGTGGAAGGGGGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPQLSCP*WKGAVE
Trigger: CTCCACAGCCCCCTTCCACCATGGGCATGAGAGCTG...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGATAAAGGGCCAGCCTCACGAGTaGCCCCCATCTCCTGGGACC +
Preference number: 4 (lower is better)
Translates to: HCLGERREGTKQAEGGIKGQPHE*PPSPGT
Trigger: GGTCCCAGGAGATGGGGGCCACTCGTGAGGCTGGCC...CTTTATCCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAAGAAGCAGAGGGCCCAGGAGAGGACACTGACATGCTaGATGCGCCTGCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: HRSRSLQRSASKKQRAQERTLTC*MRLPCV
Trigger: CACACAGGGCAGGCGCATCCAGCATGTCAGTGTCCT...CTCCTGGGCCCTCTGCTTCTTGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CAA 72 bp CGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAATaGCGAGGCCCCAGCTGCCCCCAGGGAGAGTGCACT +
Preference number: 4 (lower is better)
Translates to: RAARMGEILKQE*RGPSCPQGECT
Trigger: AGTGCACTCTCCCTGGGGGCAGCTGGGGCCTCGCAATTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CAGGGACGTCGCCACGTGCGCAGGCCATGGTATAATGAAGCTGAGACGTGGCCGTGTGCTTCCGAGGGTTaGAGAGCTCCCCGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: QGRRHVRRPWYNEAETWPCASEG*RAPRLA
Trigger: TGCCAGGCGGGGAGCTCTTCAACCCTCGGAAGCACA...CGGCCACGTCTCAGCTTCATTATACCATGGCCTGCGCACGTGGCGACGTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGATAAAGGCGCCGGGCATCCCGTaGCCGTTTAGCTGCCACGTT +
Preference number: 4 (lower is better)
Translates to: HCLGERREGTKQAEGGIKAPGIP*PFSCHV
Trigger: AACGTGGCAGCTAAACGGTCACGGGATGCCCGGCGC...CTTTATCCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAATGCGTTCCCCACCAGTaGGGAGACTGGCCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: CPADTLRAARMGEILKQECVPHQ*GDWPLR
Trigger: CCTGAGGGGCCAGTCTCCTCACTGGTGGGGAACGCA...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CAAAGGGCCGTGGCATTCCCCTGGGGTGAGGTCCACGGCTTGGTCTTAACGTCTTGCGTTCCCCACCAGTaGGGAGACTGGCCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: QRAVAFPWGEVHGLVLTSCVPHQ*GDWPLR
Trigger: CCTGAGGGGCCAGTCTCCTCACTGGTGGGGAACGCA...AGACGTTAAGACCAAGCCGTGGACCTCACCCCAGGGGAATGCCACGGCCCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CTCAGCCCTGGCACTCATGGCTCAGACAGCAGCCATCCTAGGAGTCTCTCCTCCCCGGCCCACCAGCAGTaGCACACTCGCACGCACACA +
Preference number: 4 (lower is better)
Translates to: LSPGTHGSDSSHPRSLSSPAHQQ*HTRTHT
Trigger: TGTGTGCGTGCGAGTGTGTCACTGCTGGTGGGCCGG...GGAGGAGAGACTCCTAGGATGGCTGCTGTCTGAGCCATGAGTGCCAGGGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCGGAGGATGGTGGGGATaGTGTGGAAGAGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPGGWWG*CGRAGR
Trigger: TCTGCCAGCTCTTCCACAGCATCCCCACCATCCTCC...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp CAGGGACGTCGCCACGTGCGCAGGCCATGGTATAATGAAGCTGAGACGTGGCCGACTTGCCCACCTCCTTaGGTAGCTCGGCCACCTCCG +
Preference number: 4 (lower is better)
Translates to: QGRRHVRRPWYNEAETWPTCPPP*VARPPP
Trigger: CGGAGGTGGCCGAGCTACGCAAGGAGGTGGGCAAGT...CGGCCACGTCTCAGCTTCATTATACCATGGCCTGCGCACGTGGCGACGTCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp CACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAAGAAGCAGAGGGCCCAGGAGCGATGGTCTTGCACTTaGCCACCTCCTTGCGTAGCT +
Preference number: 4 (lower is better)
Translates to: HRSRSLQRSASKKQRAQERWSCT*PPPCVA
Trigger: AGCTACGCAAGGAGGTGGGCAAGTGCAAGACCATCG...CTCCTGGGCCCTCTGCTTCTTGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp CACATCGAGCCACCATCCCAGCCACCGGGCTCGGAACATGGACACCAGAGATTTGGCAGAGGTCTGAGGTaGAGGCAGTACCCCGCCCGG +
Preference number: 4 (lower is better)
Translates to: HIEPPSQPPGSEHGHQRFGRGLR*RQYPAR
Trigger: CCGGGCGGGGTACTGCCTGCACCTCAGACCTCTGCC...AAATCTCTGGTGTCCATGTTCCGAGCCCGGTGGCTGGGATGGTGGCTCGATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp AAGCACTTTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCCGCTCCTGCAGCAGGTaGGCCGCCATGCGCCCACGA +
Preference number: 4 (lower is better)
Translates to: KHFGKEPDTHCLGERREGRSCSR*AAMRPR
Trigger: TCGTGGGCGCATGGCGGCGCACCTGCTGCAGGAGCG...GCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp AGGCCAAAGGACCGTAGGAGCGGCCTGCACAGCCCCTCAGCAGGGTTACATGTATGGGCACACTTCTGCTaGAGGCCCCAGCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: RPKDRRSGLHSPSAGLHVWAHFC*RPQPQA
Trigger: GGCTTGGGGCTGGGGCCTGCAGCAGAAGTGTGCCCA...TACATGTAACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGTCCTTTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCGAACCCGATACCCACTaGCTGGGGGAAAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPEPDTH*LGERRE
Trigger: CTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTC...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp CAAAGGGCCGTGGCATTCCCCTGGGGTGAGGTCCACGGCTTGGTCTTAACGTCTACCGTAGGAGCGGCCTaGACAGCCCCTCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: QRAVAFPWGEVHGLVLTSTVGAA*TAPQQG
Trigger: ACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGT...AGACGTTAAGACCAAGCCGTGGACCTCACCCCAGGGGAATGCCACGGCCCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp CTCAGCCCTGGCACTCATGGCTCAGACAGCAGCCATCCTAGGAGTCTCTCCTCCACCGTAGGAGCGGCCTaGACAGCCCCTCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: LSPGTHGSDSSHPRSLSSTVGAA*TAPQQG
Trigger: ACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGT...GGAGGAGAGACTCCTAGGATGGCTGCTGTCTGAGCCATGAGTGCCAGGGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CAAAGGGCCGTGGCATTCCCCTGGGGTGAGGTCCACGGCTTGGTCTTAACGTCTAGGCTGAGACAGCCATaGTGCTGGCGGCTGCGGCCT +
Preference number: 4 (lower is better)
Translates to: QRAVAFPWGEVHGLVLTSRLRQP*CWRLRP
Trigger: AGGCCGCAGCCGCCAGCACCATGGCTGTCTCAGCCT...AGACGTTAAGACCAAGCCGTGGACCTCACCCCAGGGGAATGCCACGGCCCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CCTCCCTTGGCCTCAGGGCCCCTTGTCAAGTCCCCCGGAGAGGTGGGTGTGCAGCAGAGGGCTGAAAGATaGCAGTGGAGGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: PPLASGPLVKSPGEVGVQQRAER*QWRRMV
Trigger: CACCATCCTCCTCCACTGCCATCTTTCAGCCCTCTG...CTGCACACCCACCTCTCCGGGGGACTTGACAAGGGGCCCTGAGGCCAAGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CCTCCCTTGGCCTCAGGGCCCCTTGTCAAGTCCCCCGGAGAGGTGGGTGTGCAGCACAATTGGGGTCGATaGGACTGGGAGTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PPLASGPLVKSPGEVGVQHNWGR*DWESPS
Trigger: AGAGGGAGACTCCCAGTCCCATCGACCCCAATTGTG...CTGCACACCCACCTCTCCGGGGGACTTGACAAGGGGCCCTGAGGCCAAGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAAGCCGTGGCATTCCCCTaGGGTGAGGTCCACGGCTTG +
Preference number: 4 (lower is better)
Translates to: CPADTLRAARMGEILKQEAVAFP*GEVHGL
Trigger: CAAGCCGTGGACCTCACCCCAGGGGAATGCCACGGC...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp AGGCCAAAGGACCGTAGGAGCGGCCTGCACAGCCCCTCAGCAGGGTTACATGTAGCCGTGGCATTCCCCTaGGGTGAGGTCCACGGCTTG +
Preference number: 4 (lower is better)
Translates to: RPKDRRSGLHSPSAGLHVAVAFP*GEVHGL
Trigger: CAAGCCGTGGACCTCACCCCAGGGGAATGCCACGGC...TACATGTAACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGTCCTTTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CAAAGGGCCGTGGCATTCCCCTGGGGTGAGGTCCACGGCTTGGTCTTAACGTCTTGGCATGAGGGAGGCTaGGACAGCCATGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: QRAVAFPWGEVHGLVLTSWHEGG*DSHGAG
Trigger: GCCAGCACCATGGCTGTCTCAGCCTCCCTCATGCCA...AGACGTTAAGACCAAGCCGTGGACCTCACCCCAGGGGAATGCCACGGCCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp AGGCCAAAGGACCGTAGGAGCGGCCTGCACAGCCCCTCAGCAGGGTTACATGTAAAGTCTCCACGCGTGTaGGGGGTTACAGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RPKDRRSGLHSPSAGLHVKSPRV*GVTGSP
Trigger: GGGGCTCCCTGTAACCCCTCACACGCGTGGAGACTT...TACATGTAACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGTCCTTTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAAGAAGCAGAGGGCCCAGGAGCCAGAGGTCCCCTTCTaGTTCAACTGGGACATCCAA +
Preference number: 4 (lower is better)
Translates to: HRSRSLQRSASKKQRAQEPEVPF*FNWDIQ
Trigger: TTGGATGTCCCAGTTGAATCAGAAGGGGACCTCTGG...CTCCTGGGCCCTCTGCTTCTTGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp GATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGAGCCTGGAGAGGAAATaGAGAGGCCTCTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: DTHCLGERREGTKQAEGGSLERK*RGLSQP
Trigger: GGGCTGAGAGAGGCCTCTTCATTTCCTCTCCAGGCT...CCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAAGAAGCAGAGGGCCCAGGAGGCTTCACATGGCCTCTaGGTAGCCTGGAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: HRSRSLQRSASKKQRAQEASHGL*VAWRGN
Trigger: ATTTCCTCTCCAGGCTACTCAGAGGCCATGTGAAGC...CTCCTGGGCCCTCTGCTTCTTGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CACATCGAGCCACCATCCCAGCCACCGGGCTCGGAACATGGACACCAGAGATTTCCGGCCCACCAGCAGTaGCACACTCGCACGCACACA +
Preference number: 4 (lower is better)
Translates to: HIEPPSQPPGSEHGHQRFPAHQQ*HTRTHT
Trigger: TGTGTGCGTGCGAGTGTGTCACTGCTGGTGGGCCGG...AAATCTCTGGTGTCCATGTTCCGAGCCCGGTGGCTGGGATGGTGGCTCGATGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAACATGGCAGGGGCCACTaGGAACCAGTCGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: CPADTLRAARMGEILKQEHGRGH*EPVAAH
Trigger: GTGAGCTGCGACTGGTTCTCAGTGGCCCCTGCCATG...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406644.7
CDS-3UTR GCA 90 bp TTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACGCGACCCGCTGCAGCTaGCGACACGGGCAGCTACTG +
Preference number: 4 (lower is better)
Translates to: LGKNPIPTAWGKEGRAPNATRCS*RHGQLL
Trigger: CAGTAGCTGCCCGTGTCGGCAGCTGCAGCGGGTCGC...GTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266304.9
CDS-3UTR GCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAAACTTGCCCACCTCCTTaGGTAGCTCGGCCACCTCCG +
Preference number: 4 (lower is better)
Translates to: CPADTLRAARMGEILKQETCPPP*VARPPP
Trigger: CGGAGGTGGCCGAGCTACGCAAGGAGGTGGGCAAGT...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCTGGACACGATGGTCTTaGACTTGCCCACCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPWTRWS*TCPPPC
Trigger: GCAAGGAGGTGGGCAAGTGCAAGACCATCGTGTCCA...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp ACCACGGTAAATAAAGCCAGTGTTACGGAGGACGAAGCACGCCCATCGCCTCTGAGGCCAGAGGGAGCGTaGCCGGGAGGGAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: TTVNKASVTEDEARPSPLRPEGA*PGGRAA
Trigger: GGCAGCTCTCCCTCCCGGGCACGCTCCCTCTGGCCT...CAGAGGCGATGGGCGTGCTTCGTCCTCCGTAACACTGGCTTTATTTACCGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp CCTCCCTTGGCCTCAGGGCCCCTTGTCAAGTCCCCCGGAGAGGTGGGTGTGCAGAGGTTCACTGCTAAGTaGCCCCTCCAACCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: PPLASGPLVKSPGEVGVQRFTAK*PLQPQK
Trigger: CTTCTGAGGTTGGAGGGGGCACTTAGCAGTGAACCT...CTGCACACCCACCTCTCCGGGGGACTTGACAAGGGGCCCTGAGGCCAAGGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp GAAAGAGCAGGCCCAGAGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCAGACAGCCATGGTGCTaGCGGCTGCGGCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: ERAGPEAWSSGTNELHMARQPWC*RLRPRP
Trigger: AGGACGAGGCCGCAGCCGCCAGCACCATGGCTGTCT...GGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCTCTGGGCCTGCTCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CAGGGACGTCGCCACGTGCGCAGGCCATGGTATAATGAAGCTGAGACGTGGCCGGGAGCCGAGAAACGCTaGGCACACTTCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QGRRHVRRPWYNEAETWPGAEKR*AHFCCR
Trigger: CCTGCAGCAGAAGTGTGCCCAGCGTTTCTCGGCTCC...CGGCCACGTCTCAGCTTCATTATACCATGGCCTGCGCACGTGGCGACGTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp TTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACGGCCAGCCTCACGAGTaGCCCCCATCTCCTGGGACC +
Preference number: 4 (lower is better)
Translates to: LGKNPIPTAWGKEGRAPNGQPHE*PPSPGT
Trigger: GGTCCCAGGAGATGGGGGCCACTCGTGAGGCTGGCC...GTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CAA 72 bp GAGCTTTGCCATGAAAACCAGATGCTCCTCGGCCCTTaGCGTTCCAAGGAGCACGGCTCCCGGGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: ELCHENQMLLGP*RSKEHGSRGPG
Trigger: ACCTGGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTTTCATGGCAAAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp AAGCACTTTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCAGAGTCCAGGGACCCTaGGCGCCCAGGAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: KHFGKEPDTHCLGERREGRVQGP*APRREV
Trigger: CACCTCTCTCCTGGGCGCTCAGGGTCCCTGGACTCT...GCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp ACAGATGTCAAAGATCCAAGCACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAGAACCGCCCTCTTGGTaGTCCACCAGGCCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: TDVKDPSTGAAVSSGRPPEPPSW*STRPEG
Trigger: TCCCTCTGGCCTGGTGGATCACCAAGAGGGCGGTTC...TGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTGCTTGGATCTTTGACATCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CACATCGAGCCACCATCCCAGCCACCGGGCTCGGAACATGGACACCAGAGATTTGAACCGCCCTCTTGGTaGTCCACCAGGCCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: HIEPPSQPPGSEHGHQRFEPPSW*STRPEG
Trigger: TCCCTCTGGCCTGGTGGATCACCAAGAGGGCGGTTC...AAATCTCTGGTGTCCATGTTCCGAGCCCGGTGGCTGGGATGGTGGCTCGATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAAGAAGCAGAGGGCCCAGGAGAGTAGAGCTTTGCCATaGAAACCAGATGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: HRSRSLQRSASKKQRAQESRALP*KPDAPR
Trigger: CCGAGGAGCATCTGGTTTTCATGGCAAAGCTCTACT...CTCCTGGGCCCTCTGCTTCTTGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp TTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACCTGAGACAGCCATGGTaGTGGCGGCTGCGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: LGKNPIPTAWGKEGRAPNLRQPW*WRLRPR
Trigger: ACGAGGCCGCAGCCGCCAGCACCATGGCTGTCTCAG...GTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp AGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGCTGAGACAGCCATGGTaGTGGCGGCTGCGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: RPGLVGQTSFTWPLSSLELRQPW*WRLRPR
Trigger: ACGAGGCCGCAGCCGCCAGCACCATGGCTGTCTCAG...CTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp AAGCACTTTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCCGCTGGGCACACTTCTaGTGCAGGCCCCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: KHFGKEPDTHCLGERREGRWAHF*CRPQPQ
Trigger: TTGGGGCTGGGGCCTGCAGCAGAAGTGTGCCCAGCG...GCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp AGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGTTGCGAGGCCCCAGCTaGCCCCAGGGAGAGTGCACT +
Preference number: 4 (lower is better)
Translates to: RPGLVGQTSFTWPLSSLELRGPS*PQGECT
Trigger: AGTGCACTCTCCCTGGGGGCAGCTGGGGCCTCGCAA...CTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp AGGCCAAAGGACCGTAGGAGCGGCCTGCACAGCCCCTCAGCAGGGTTACATGTAGGCAGGACACTGACATaGTGGATGCGCCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: RPKDRRSGLHSPSAGLHVGRTLT*WMRLPC
Trigger: ACAGGGCAGGCGCATCCAGCATGTCAGTGTCCTGCC...TACATGTAACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGTCCTTTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp CACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGATAAAGGCCCAGGTAGAGGGCTaGCCAGCTTCAGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: HCLGERREGTKQAEGGIKAQVEG*PASEGF
Trigger: AAACCCCTCTGAAGCTGGGCAGCCCTCTACCTGGGC...CTTTATCCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp AGGCCAAAGGACCGTAGGAGCGGCCTGCACAGCCCCTCAGCAGGGTTACATGTAGCCCAGGTAGAGGGCTaGCCAGCTTCAGAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: RPKDRRSGLHSPSAGLHVAQVEG*PASEGF
Trigger: AAACCCCTCTGAAGCTGGGCAGCCCTCTACCTGGGC...TACATGTAACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGTCCTTTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCGCCATGAAAACCAGATaGTCCTCGGCCCTTTGCGTT +
Preference number: 4 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPAMKTR*SSALCV
Trigger: AACGCAAAGGGCCGAGGAGCATCTGGTTTTCATGGC...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp CACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGATAAAGCCAGCAGGAGGTGCTTaGTCCAGGGAGTTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: HCLGERREGTKQAEGGIKPAGGA*SREFRG
Trigger: GCCTCTGAACTCCCTGGAGCAAGCACCTCCTGCTGG...CTTTATCCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406644.7
CDS-3UTR CCA 90 bp TTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGACAGCCATGGTGCTaGCGGCTGCGGCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: LGKNPIPTAWGKEGRAPNRQPWC*RLRPRP
Trigger: AGGACGAGGCCGCAGCCGCCAGCACCATGGCTGTCT...GTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAAGAAGCAGAGGGCCCAGGAGATGCTGTGGAAGAGCTaGCAGACTCCTTCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: HRSRSLQRSASKKQRAQEMLWKS*QTPSLL
Trigger: TAGAAGGGAAGGAGTCTGCCAGCTCTTCCACAGCAT...CTCCTGGGCCCTCTGCTTCTTGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CACATCGAGCCACCATCCCAGCCACCGGGCTCGGAACATGGACACCAGAGATTTGAAGAGCTCCCCGCCTaGCACACTGGAGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: HIEPPSQPPGSEHGHQRFEELPA*HTGEHQ
Trigger: CTGGTGCTCTCCAGTGTGCCAGGCGGGGAGCTCTTC...AAATCTCTGGTGTCCATGTTCCGAGCCCGGTGGCTGGGATGGTGGCTCGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGATAAAGGGAGCCGAGAAACGCTaGGCACACTTCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HCLGERREGTKQAEGGIKGAEKR*AHFCCR
Trigger: CCTGCAGCAGAAGTGTGCCCAGCGTTTCTCGGCTCC...CTTTATCCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAACAGCCCTGGCACTCATaGCTCAGACAGCAGCCATCC +
Preference number: 4 (lower is better)
Translates to: CPADTLRAARMGEILKQEQPWHS*LRQQPS
Trigger: GGATGGCTGCTGTCTGAGCCATGAGTGCCAGGGCTG...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CAAAGGGCCGTGGCATTCCCCTGGGGTGAGGTCCACGGCTTGGTCTTAACGTCTGCAGGCCCAGAGGCCTaGTCTAGTGGGACAAACGAG +
Preference number: 4 (lower is better)
Translates to: QRAVAFPWGEVHGLVLTSAGPEA*SSGTNE
Trigger: CTCGTTTGTCCCACTAGACCAGGCCTCTGGGCCTGC...AGACGTTAAGACCAAGCCGTGGACCTCACCCCAGGGGAATGCCACGGCCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp GAAAGAGCAGGCCCAGAGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCAGTCCCCCGGAGAGGTaGGTGTGCAGGTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: ERAGPEAWSSGTNELHMASPPER*VCRSPK
Trigger: CTTTGGGGACCTGCACACCCACCTCTCCGGGGGACT...GGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCTCTGGGCCTGCTCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CTCAGCCCTGGCACTCATGGCTCAGACAGCAGCCATCCTAGGAGTCTCTCCTCCAGGAGTGACCTCCCTTaGCCTCAGGGCCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LSPGTHGSDSSHPRSLSSRSDLP*PQGPLS
Trigger: TGACAAGGGGCCCTGAGGCCAAGGGAGGTCACTCCT...GGAGGAGAGACTCCTAGGATGGCTGCTGTCTGAGCCATGAGTGCCAGGGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp AGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGGAGTTCAGAGGCAGCTaGAGAGGCAGGGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: RPGLVGQTSFTWPLSSLEEFRGS*RGRGRQ
Trigger: CTGGCGGCCCCTGCCTCTCCAGCTGCCTCTGAACTC...CTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406644.7
CDS-3UTR CCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAACCTCAGGCATGTCCATaGCAGGGGCCACTGAGAACC +
Preference number: 4 (lower is better)
Translates to: CPADTLRAARMGEILKQEPQACP*QGPLRT
Trigger: GGTTCTCAGTGGCCCCTGCCATGGACATGCCTGAGG...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406644.7
CDS-3UTR TCA 90 bp AGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGAAGTCTCCACGCGTGTaGGGGGTTACAGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RPGLVGQTSFTWPLSSLEKSPRV*GVTGSP
Trigger: GGGGCTCCCTGTAACCCCTCACACGCGTGGAGACTT...CTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CAGGGACGTCGCCACGTGCGCAGGCCATGGTATAATGAAGCTGAGACGTGGCCGACACCACTAGGAAGGTaGATCCTGGGGTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QGRRHVRRPWYNEAETWPTPLGR*ILGSRK
Trigger: CTTCCTGGACCCCAGGATTCACCTTCCTAGTGGTGT...CGGCCACGTCTCAGCTTCATTATACCATGGCCTGCGCACGTGGCGACGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp GGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGAGGAAAGGTGTCTTGCCCTGCTaGCACCCTCCGGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GLVGQTSFTWPLSSLERKGVLPC*HPPGSS
Trigger: CGAGCTGCCCGGAGGGTGTCAGCAGGGCAAGACACC...TTTCCTCTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp AGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGTCCTGGGACCAAGACTaGGGGGACCCTAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: RPGLVGQTSFTWPLSSLESWDQD*GDPRPV
Trigger: CACAGGCCTAGGGTCCCCTCAGTCTTGGTCCCAGGA...CTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp GATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGCAGGGCCTGGGACTCTaGACCACCACGGTAAATAAA +
Preference number: 4 (lower is better)
Translates to: DTHCLGERREGTKQAEGGQGLGL*TTTVNK
Trigger: TTTATTTACCGTGGTGGTTCAGAGTCCCAGGCCCTG...CCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp AGGCCAAAGGACCGTAGGAGCGGCCTGCACAGCCCCTCAGCAGGGTTACATGTATCCCTCGACAGAAACTaGGCAGGCACCAACCCTCTC +
Preference number: 4 (lower is better)
Translates to: RPKDRRSGLHSPSAGLHVSLDRN*AGTNPL
Trigger: GAGAGGGTTGGTGCCTGCTCAGTTTCTGTCGAGGGA...TACATGTAACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGTCCTTTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAAAGGGACGTCGCCACGTaGGCAGGCCATGGTATAATG +
Preference number: 4 (lower is better)
Translates to: CPADTLRAARMGEILKQERDVAT*AGHGIM
Trigger: CATTATACCATGGCCTGCGCACGTGGCGACGTCCCT...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp GATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGAGTGGAAACGCGCCCTaGTACCTGAGAAGACATAGG +
Preference number: 4 (lower is better)
Translates to: DTHCLGERREGTKQAEGGSGNAP*YLRRHR
Trigger: CCTATGTCTTCTCAGGTAGCAGGGCGCGTTTCCACT...CCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp GAAAGAGCAGGCCCAGAGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCCAGAGACCCCACTCCTaGAGCCTGCTACCCATGCAG +
Preference number: 4 (lower is better)
Translates to: ERAGPEAWSSGTNELHMAQRPHS*SLLPMQ
Trigger: CTGCATGGGTAGCAGGCTGCAGGAGTGGGGTCTCTG...GGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCTCTGGGCCTGCTCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp ACAGATGTCAAAGATCCAAGCACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCACAGCCCAGCAGGAGGTaGTTGCTCCAGGGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: TDVKDPSTGAAVSSGRPPQPSRR*LLQGVQ
Trigger: CTGAACTCCCTGGAGCAAGCACCTCCTGCTGGGCTG...TGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTGCTTGGATCTTTGACATCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406644.7
CDS-3UTR GCA 90 bp CACATCGAGCCACCATCCCAGCCACCGGGCTCGGAACATGGACACCAGAGATTTGGCCAAGGCAGAGAGTaGTCCAGCAGGGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: HIEPPSQPPGSEHGHQRFGQGRE*SSRDLR
Trigger: CCTCAAGTCCCTGCTGGAGCACTCTCTGCCTTGGCC...AAATCTCTGGTGTCCATGTTCCGAGCCCGGTGGCTGGGATGGTGGCTCGATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406644.7
CDS-3UTR CCA 90 bp CTCAGCCCTGGCACTCATGGCTCAGACAGCAGCCATCCTAGGAGTCTCTCCTCCTGGGGTCGATGGGACTaGGAGTCTCCCTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LSPGTHGSDSSHPRSLSSWGRWD*ESPSPS
Trigger: AGAAGGAGAGGGAGACTCCCAGTCCCATCGACCCCA...GGAGGAGAGACTCCTAGGATGGCTGCTGTCTGAGCCATGAGTGCCAGGGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp AGGCCAAAGGACCGTAGGAGCGGCCTGCACAGCCCCTCAGCAGGGTTACATGTATGGGGTCGATGGGACTaGGAGTCTCCCTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RPKDRRSGLHSPSAGLHVWGRWD*ESPSPS
Trigger: AGAAGGAGAGGGAGACTCCCAGTCCCATCGACCCCA...TACATGTAACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGTCCTTTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CAGGGACGTCGCCACGTGCGCAGGCCATGGTATAATGAAGCTGAGACGTGGCCGCACAATTGGGGTCGATaGGACTGGGAGTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QGRRHVRRPWYNEAETWPHNWGR*DWESPS
Trigger: AGAGGGAGACTCCCAGTCCCATCGACCCCAATTGTG...CGGCCACGTCTCAGCTTCATTATACCATGGCCTGCGCACGTGGCGACGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp AGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGGAAGAGCTCCCCGCCTaGCACACTGGAGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: RPGLVGQTSFTWPLSSLEEELPA*HTGEHQ
Trigger: CTGGTGCTCTCCAGTGTGCCAGGCGGGGAGCTCTTC...CTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp ACAGATGTCAAAGATCCAAGCACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAGGCCTCTCTCAGCCCTaGCACTCATGGCTCAGACAG +
Preference number: 4 (lower is better)
Translates to: TDVKDPSTGAAVSSGRPPGLSQP*HSWLRQ
Trigger: CTGTCTGAGCCATGAGTGCCAGGGCTGAGAGAGGCC...TGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTGCTTGGATCTTTGACATCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp AGGCCAAAGGACCGTAGGAGCGGCCTGCACAGCCCCTCAGCAGGGTTACATGTATTAGAGGTCAGGGCCTaGGACTCTGAACCACCACGG +
Preference number: 4 (lower is better)
Translates to: RPKDRRSGLHSPSAGLHVLEVRA*DSEPPR
Trigger: CCGTGGTGGTTCAGAGTCCCAGGCCCTGACCTCTAA...TACATGTAACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGTCCTTTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp AGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGAAGAGAGGGGCCCGCTaGAATGCCAGCTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: RPGLVGQTSFTWPLSSLEKRGAR*NASSQG
Trigger: TCCCTGGGAGCTGGCATTCCAGCGGGCCCCTCTCTT...CTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CACATCGAGCCACCATCCCAGCCACCGGGCTCGGAACATGGACACCAGAGATTTAGCCTGGAGAGGAAATaGAGAGGCCTCTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: HIEPPSQPPGSEHGHQRFSLERK*RGLSQP
Trigger: GGGCTGAGAGAGGCCTCTTCATTTCCTCTCCAGGCT...AAATCTCTGGTGTCCATGTTCCGAGCCCGGTGGCTGGGATGGTGGCTCGATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CTCAGCCCTGGCACTCATGGCTCAGACAGCAGCCATCCTAGGAGTCTCTCCTCCACACCACTAGGAAGGTaGATCCTGGGGTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LSPGTHGSDSSHPRSLSSTPLGR*ILGSRK
Trigger: CTTCCTGGACCCCAGGATTCACCTTCCTAGTGGTGT...GGAGGAGAGACTCCTAGGATGGCTGCTGTCTGAGCCATGAGTGCCAGGGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGATAAAGGCATGGGAGAGATCCTaGAGCAAGAATTGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: HCLGERREGTKQAEGGIKAWERS*SKNCEA
Trigger: GGCCTCGCAATTCTTGCTTCAGGATCTCTCCCATGC...CTTTATCCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CAAAGGGCCGTGGCATTCCCCTGGGGTGAGGTCCACGGCTTGGTCTTAACGTCTGAGCCTGCTATCCCGTaGAAGTGGCACTGTGACCTT +
Preference number: 4 (lower is better)
Translates to: QRAVAFPWGEVHGLVLTSEPAIP*KWHCDL
Trigger: AAGGTCACAGTGCCACTTTCACGGGATAGCAGGCTC...AGACGTTAAGACCAAGCCGTGGACCTCACCCCAGGGGAATGCCACGGCCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CACATCGAGCCACCATCCCAGCCACCGGGCTCGGAACATGGACACCAGAGATTTTCCCTCGACAGAAACTaGGCAGGCACCAACCCTCTC +
Preference number: 4 (lower is better)
Translates to: HIEPPSQPPGSEHGHQRFSLDRN*AGTNPL
Trigger: GAGAGGGTTGGTGCCTGCTCAGTTTCTGTCGAGGGA...AAATCTCTGGTGTCCATGTTCCGAGCCCGGTGGCTGGGATGGTGGCTCGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp GATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGATGATTTGTCTGTTCTaGGGTTGCACTGAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: DTHCLGERREGTKQAEGGMICLF*GCTEGA
Trigger: GGCACCCTCAGTGCAACCTCAGAACAGACAAATCAT...CCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp TTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACGCTCCAGCAGGGACTTaGGGACCTCAGGCATGTCCA +
Preference number: 4 (lower is better)
Translates to: LGKNPIPTAWGKEGRAPNAPAGT*GPQACP
Trigger: TGGACATGCCTGAGGTCCTCAAGTCCCTGCTGGAGC...GTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406644.7
CDS-3UTR GCA 90 bp CACATCGAGCCACCATCCCAGCCACCGGGCTCGGAACATGGACACCAGAGATTTGGAGGATGGTGGGGATaGTGTGGAAGAGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: HIEPPSQPPGSEHGHQRFGGWWG*CGRAGR
Trigger: TCTGCCAGCTCTTCCACAGCATCCCCACCATCCTCC...AAATCTCTGGTGTCCATGTTCCGAGCCCGGTGGCTGGGATGGTGGCTCGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp GAAAGAGCAGGCCCAGAGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCAGGGACGTCGCCACGTaGGCAGGCCATGGTATAATG +
Preference number: 4 (lower is better)
Translates to: ERAGPEAWSSGTNELHMARDVAT*AGHGIM
Trigger: CATTATACCATGGCCTGCGCACGTGGCGACGTCCCT...GGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCTCTGGGCCTGCTCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp AGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGACACCCCAGCTCTCATaGCCATGGTGGAAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: RPGLVGQTSFTWPLSSLETPQLS*PWWKGA
Trigger: AGCCCCCTTCCACCATGGGCATGAGAGCTGGGGTGT...CTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp AGGCCAAAGGACCGTAGGAGCGGCCTGCACAGCCCCTCAGCAGGGTTACATGTAATGGTGGGGATGCTGTaGAAGAGCTGGCAGACTCCT +
Preference number: 4 (lower is better)
Translates to: RPKDRRSGLHSPSAGLHVMVGML*KSWQTP
Trigger: AGGAGTCTGCCAGCTCTTCCACAGCATCCCCACCAT...TACATGTAACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGTCCTTTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp ACAGATGTCAAAGATCCAAGCACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAAATGAAGCTGAGACGTaGCCGCTCCTGCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: TDVKDPSTGAAVSSGRPPNEAET*PLLQQV
Trigger: CACCTGCTGCAGGAGCGGCCACGTCTCAGCTTCATT...TGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTGCTTGGATCTTTGACATCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAAGAAGCAGAGGGCCCAGGAGGAAAACCTCTTCCTTTaGCCAAGGGTAAGAGTTACC +
Preference number: 4 (lower is better)
Translates to: HRSRSLQRSASKKQRAQEENLFL*PRVRVT
Trigger: GGTAACTCTTACCCTTGGCCAAAGGAAGAGGTTTTC...CTCCTGGGCCCTCTGCTTCTTGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp GATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGTGCTTCTGCCCTCTCTaGCTGGGAAGAAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: DTHCLGERREGTKQAEGGCFCPL*LGRRNF
Trigger: GAAATTCCTTCTTCCCAGCCAGAGAGGGCAGAAGCA...CCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp TGCCCTCTCTGGCTGGGAAGAAGGAATTTCTCTCTTGCCTCCTTCCCCCAACAATGGCATGAGGGAGGCTaGGACAGCCATGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: CPLWLGRRNFSLASFPQQWHEGG*DSHGAG
Trigger: GCCAGCACCATGGCTGTCTCAGCCTCCCTCATGCCA...TTGTTGGGGGAAGGAGGCAAGAGAGAAATTCCTTCTTCCCAGCCAGAGAGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp AGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGCGGCGGGGTCCGGATTaGAGTTCACATCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: RPGLVGQTSFTWPLSSLERRGPD*SSHPLP
Trigger: TGGAAGTGGATGTGAACTTCAATCCGGACCCCGCCG...CTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp AGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGTACCCATGCAGACACTaGCGGAGGAGCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: RPGLVGQTSFTWPLSSLEYPCRH*RRSWCV
Trigger: GACACACCAGCTCCTCCGTCAGTGTCTGCATGGGTA...CTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CAAAGGGCCGTGGCATTCCCCTGGGGTGAGGTCCACGGCTTGGTCTTAACGTCTCTCCTCCACAGCCAATaGAATGCAGAGACAGCCGAT +
Preference number: 4 (lower is better)
Translates to: QRAVAFPWGEVHGLVLTSLLHSQ*NAETAD
Trigger: ATCGGCTGTCTCTGCATTTCATTGGCTGTGGAGGAG...AGACGTTAAGACCAAGCCGTGGACCTCACCCCAGGGGAATGCCACGGCCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGATAAAGCAGGGCCTGGGACTCTaGACCACCACGGTAAATAAA +
Preference number: 4 (lower is better)
Translates to: HCLGERREGTKQAEGGIKQGLGL*TTTVNK
Trigger: TTTATTTACCGTGGTGGTTCAGAGTCCCAGGCCCTG...CTTTATCCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp GTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTGTCTGGGGCCCGGGGCAGGACACTaGCATGCTGGATGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: VSCFQGRWEQMLLKDCLGPGAGH*HAGCAC
Trigger: GCAGGCGCATCCAGCATGTCAGTGTCCTGCCCCGGG...CCCCAGACAGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAAAGTGGAAACGCGCCCTaGTACCTGAGAAGACATAGG +
Preference number: 4 (lower is better)
Translates to: CPADTLRAARMGEILKQESGNAP*YLRRHR
Trigger: CCTATGTCTTCTCAGGTAGCAGGGCGCGTTTCCACT...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp AAGCACTTTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCGAACCCGATACCCACTaGCTGGGGGAAAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: KHFGKEPDTHCLGERREGEPDTH*LGERRE
Trigger: CTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTC...GCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp CAAAGGGCCGTGGCATTCCCCTGGGGTGAGGTCCACGGCTTGGTCTTAACGTCTAGGTTCACTGCTAAGTaGCCCCTCCAACCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: QRAVAFPWGEVHGLVLTSRFTAK*PLQPQK
Trigger: CTTCTGAGGTTGGAGGGGGCACTTAGCAGTGAACCT...AGACGTTAAGACCAAGCCGTGGACCTCACCCCAGGGGAATGCCACGGCCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAACGCCATCATATGGGATaGTCTTGTCCCAGATGGGTG +
Preference number: 4 (lower is better)
Translates to: CPADTLRAARMGEILKQERHHMG*SCPRWV
Trigger: CACCCATCTGGGACAAGACCATCCCATATGATGGCG...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp ACAGATGTCAAAGATCCAAGCACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCACAGAGGGCTGAAAGATaGCAGTGGAGGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: TDVKDPSTGAAVSSGRPPQRAER*QWRRMV
Trigger: CACCATCCTCCTCCACTGCCATCTTTCAGCCCTCTG...TGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTGCTTGGATCTTTGACATCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp AGGCCAAAGGACCGTAGGAGCGGCCTGCACAGCCCCTCAGCAGGGTTACATGTAGGGAAGATTCTGTGCTaGACACGGTTTCAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RPKDRRSGLHSPSAGLHVGKILC*TRFQRA
Trigger: AGCCCTCTGAAACCGTGTCCAGCACAGAATCTTCCC...TACATGTAACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGTCCTTTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp AGGCCAAAGGACCGTAGGAGCGGCCTGCACAGCCCCTCAGCAGGGTTACATGTACACGTGCGCAGGCCATaGTATAATGAAGCTGAGACG +
Preference number: 4 (lower is better)
Translates to: RPKDRRSGLHSPSAGLHVHVRRP*YNEAET
Trigger: CGTCTCAGCTTCATTATACCATGGCCTGCGCACGTG...TACATGTAACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGTCCTTTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp AGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGAGGACACTGACATGCTaGATGCGCCTGCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RPGLVGQTSFTWPLSSLERTLTC*MRLPCV
Trigger: CACACAGGGCAGGCGCATCCAGCATGTCAGTGTCCT...CTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAAACAGGTCAGCCTCTGTaGACATCCTCCATCTTGTCC +
Preference number: 4 (lower is better)
Translates to: CPADTLRAARMGEILKQETGQPL*TSSILS
Trigger: GGACAAGATGGAGGATGTCCACAGAGGCTGACCTGT...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CAA 72 bp GGCTCTTCCACTAATAACAAAATGAGAACCGCCCTCTaGGTGATCCACCAGGCCAGAGGGAGCGTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GSSTNNKMRTAL*VIHQARGSVPG
Trigger: CCCGGGCACGCTCCCTCTGGCCTGGTGGATCACCAAGAGGGCGGTTCTCATTTTGTTATTAGTGGAAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp ACCACGGTAAATAAAGCCAGTGTTACGGAGGACGAAGCACGCCCATCGCCTCTGTACCCATGCAGACACTaGCGGAGGAGCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: TTVNKASVTEDEARPSPLYPCRH*RRSWCV
Trigger: GACACACCAGCTCCTCCGTCAGTGTCTGCATGGGTA...CAGAGGCGATGGGCGTGCTTCGTCCTCCGTAACACTGGCTTTATTTACCGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CACATCGAGCCACCATCCCAGCCACCGGGCTCGGAACATGGACACCAGAGATTTCTCCTCCACAGCCAATaGAATGCAGAGACAGCCGAT +
Preference number: 4 (lower is better)
Translates to: HIEPPSQPPGSEHGHQRFLLHSQ*NAETAD
Trigger: ATCGGCTGTCTCTGCATTTCATTGGCTGTGGAGGAG...AAATCTCTGGTGTCCATGTTCCGAGCCCGGTGGCTGGGATGGTGGCTCGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp AAGCACTTTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCGAGCCTGCTATCCCGTaGAAGTGGCACTGTGACCTT +
Preference number: 4 (lower is better)
Translates to: KHFGKEPDTHCLGERREGEPAIP*KWHCDL
Trigger: AAGGTCACAGTGCCACTTTCACGGGATAGCAGGCTC...GCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp GATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGTTCTCTAGCCTCCAGTaGCTGACAGATGTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: DTHCLGERREGTKQAEGGFSSLQ*LTDVKD
Trigger: ATCTTTGACATCTGTCAGTCACTGGAGGCTAGAGAA...CCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp AGGCCAAAGGACCGTAGGAGCGGCCTGCACAGCCCCTCAGCAGGGTTACATGTAATGATTTGTCTGTTCTaGGGTTGCACTGAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: RPKDRRSGLHSPSAGLHVMICLF*GCTEGA
Trigger: GGCACCCTCAGTGCAACCTCAGAACAGACAAATCAT...TACATGTAACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGTCCTTTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCGTTCCAGCTCATTCATaGTTTGTCTGTTCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPVPAHS*FVCSEV
Trigger: AACCTCAGAACAGACAAATCATGAATGAGCTGGAAC...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp GAAAGAGCAGGCCCAGAGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCCCAGGGAAGATTCTGTaGTGGACACGGTTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: ERAGPEAWSSGTNELHMAPGKIL*WTRFQR
Trigger: CCTCTGAAACCGTGTCCAGCACAGAATCTTCCCTGG...GGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCTCTGGGCCTGCTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp GGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGAGGAAACAGAGACCCCACTCCTaGAGCCTGCTACCCATGCAG +
Preference number: 4 (lower is better)
Translates to: GLVGQTSFTWPLSSLERKQRPHS*SLLPMQ
Trigger: CTGCATGGGTAGCAGGCTGCAGGAGTGGGGTCTCTG...TTTCCTCTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp GAAAGAGCAGGCCCAGAGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCCCACAGCCAATGAAATaGAGAGACAGCCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: ERAGPEAWSSGTNELHMAPQPMK*RDSRWP
Trigger: AGGCCATCGGCTGTCTCTGCATTTCATTGGCTGTGG...GGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCTCTGGGCCTGCTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAAAAAGTCCCAAGAGCCTaGTATCCCGTGAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: CPADTLRAARMGEILKQEKVPRA*YPVKVA
Trigger: TGCCACTTTCACGGGATAGCAGGCTCTTGGGACTTT...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp ACCACGGTAAATAAAGCCAGTGTTACGGAGGACGAAGCACGCCCATCGCCTCTGCAATGGGCTACGGTCTaGTTCTGCCCTCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TTVNKASVTEDEARPSPLQWATV*FCPLWL
Trigger: CAGCCAGAGAGGGCAGAAGCAGACCGTAGCCCATTG...CAGAGGCGATGGGCGTGCTTCGTCCTCCGTAACACTGGCTTTATTTACCGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp AAGCACTTTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCATGGTGGGGATGCTGTaGAAGAGCTGGCAGACTCCT +
Preference number: 4 (lower is better)
Translates to: KHFGKEPDTHCLGERREGMVGML*KSWQTP
Trigger: AGGAGTCTGCCAGCTCTTCCACAGCATCCCCACCAT...GCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CACATCGAGCCACCATCCCAGCCACCGGGCTCGGAACATGGACACCAGAGATTTGGGAAGATTCTGTGCTaGACACGGTTTCAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: HIEPPSQPPGSEHGHQRFGKILC*TRFQRA
Trigger: AGCCCTCTGAAACCGTGTCCAGCACAGAATCTTCCC...AAATCTCTGGTGTCCATGTTCCGAGCCCGGTGGCTGGGATGGTGGCTCGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp ACCACGGTAAATAAAGCCAGTGTTACGGAGGACGAAGCACGCCCATCGCCTCTGAATGAAGCTGAGACGTaGCCGCTCCTGCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: TTVNKASVTEDEARPSPLNEAET*PLLQQV
Trigger: CACCTGCTGCAGGAGCGGCCACGTCTCAGCTTCATT...CAGAGGCGATGGGCGTGCTTCGTCCTCCGTAACACTGGCTTTATTTACCGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp TGCCCTCTCTGGCTGGGAAGAAGGAATTTCTCTCTTGCCTCCTTCCCCCAACAAGCAGGCCCAGAGGCCTaGTCTAGTGGGACAAACGAG +
Preference number: 4 (lower is better)
Translates to: CPLWLGRRNFSLASFPQQAGPEA*SSGTNE
Trigger: CTCGTTTGTCCCACTAGACCAGGCCTCTGGGCCTGC...TTGTTGGGGGAAGGAGGCAAGAGAGAAATTCCTTCTTCCCAGCCAGAGAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAAAGACTGGACATTGGGTaGAAAGAAAGAGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: CPADTLRAARMGEILKQERLDIG*KERAGP
Trigger: TGGGCCTGCTCTTTCTTTCCACCCAATGTCCAGTCT...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp GAAAGAGCAGGCCCAGAGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCGGTGGAAGGGGGCTGTaGAGGCATTTTCTAAACACC +
Preference number: 4 (lower is better)
Translates to: ERAGPEAWSSGTNELHMAGGRGL*RHFLNT
Trigger: GGTGTTTAGAAAATGCCTCCACAGCCCCCTTCCACC...GGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCTCTGGGCCTGCTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp TGCCCTCTCTGGCTGGGAAGAAGGAATTTCTCTCTTGCCTCCTTCCCCCAACAAAGGAGTGACCTCCCTTaGCCTCAGGGCCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: CPLWLGRRNFSLASFPQQRSDLP*PQGPLS
Trigger: TGACAAGGGGCCCTGAGGCCAAGGGAGGTCACTCCT...TTGTTGGGGGAAGGAGGCAAGAGAGAAATTCCTTCTTCCCAGCCAGAGAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp TGCCCTCTCTGGCTGGGAAGAAGGAATTTCTCTCTTGCCTCCTTCCCCCAACAACCGATACCCACTGCCTaGGGGAAAGAAGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: CPLWLGRRNFSLASFPQQPIPTA*GKEGRA
Trigger: TGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGG...TTGTTGGGGGAAGGAGGCAAGAGAGAAATTCCTTCTTCCCAGCCAGAGAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CTCAGCCCTGGCACTCATGGCTCAGACAGCAGCCATCCTAGGAGTCTCTCCTCCAACCAAGTGGTGTTCTaGCATCCCCAACACCGTAAG +
Preference number: 4 (lower is better)
Translates to: LSPGTHGSDSSHPRSLSSNQVVF*HPQHRK
Trigger: CTTACGGTGTTGGGGATGCCAGAACACCACTTGGTT...GGAGGAGAGACTCCTAGGATGGCTGCTGTCTGAGCCATGAGTGCCAGGGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CTCAGCCCTGGCACTCATGGCTCAGACAGCAGCCATCCTAGGAGTCTCTCCTCCTGCTTCTGCCCTCTCTaGCTGGGAAGAAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: LSPGTHGSDSSHPRSLSSCFCPL*LGRRNF
Trigger: GAAATTCCTTCTTCCCAGCCAGAGAGGGCAGAAGCA...GGAGGAGAGACTCCTAGGATGGCTGCTGTCTGAGCCATGAGTGCCAGGGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp AGGCCAAAGGACCGTAGGAGCGGCCTGCACAGCCCCTCAGCAGGGTTACATGTACTAGCCTCCAGTGACTaGCAGATGTCAAAGATCCAA +
Preference number: 4 (lower is better)
Translates to: RPKDRRSGLHSPSAGLHVLASSD*QMSKIQ
Trigger: TTGGATCTTTGACATCTGTCAGTCACTGGAGGCTAG...TACATGTAACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGTCCTTTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp GATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGGTTCCAGCTCATTCATaGTTTGTCTGTTCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: DTHCLGERREGTKQAEGGVPAHS*FVCSEV
Trigger: AACCTCAGAACAGACAAATCATGAATGAGCTGGAAC...CCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp CTCAGCCCTGGCACTCATGGCTCAGACAGCAGCCATCCTAGGAGTCTCTCCTCCTACTTTTCATCCTTCTaGTCGTCGGGGACAAAGACC +
Preference number: 4 (lower is better)
Translates to: LSPGTHGSDSSHPRSLSSYFSSF*SSGTKT
Trigger: GGTCTTTGTCCCCGACGAGCAGAAGGATGAAAAGTA...GGAGGAGAGACTCCTAGGATGGCTGCTGTCTGAGCCATGAGTGCCAGGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp ACAGATGTCAAAGATCCAAGCACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAGATCACAACTCATTCTaGAGAGATAGCCCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: TDVKDPSTGAAVSSGRPPDHNSF*RDSPRQ
Trigger: CTGCCGAGGGCTATCTCTGCAGAATGAGTTGTGATC...TGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTGCTTGGATCTTTGACATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp GAGCTGGTGTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTTGGGCACACTTCTGCTaGAGGCCCCAGCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: ELVCPASKEDGNRCYSKTWAHFC*RPQPQA
Trigger: GGCTTGGGGCTGGGGCCTGCAGCAGAAGTGTGCCCA...AGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp GAGCTGGTGTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTTTGCGAGGCCCCAGCTaGCCCCAGGGAGAGTGCACT +
Preference number: 4 (lower is better)
Translates to: ELVCPASKEDGNRCYSKTLRGPS*PQGECT
Trigger: AGTGCACTCTCCCTGGGGGCAGCTGGGGCCTCGCAA...AGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp GAGCTGGTGTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTGCATGCCTCCCGCCCTaGCTCAGGCCAAAGGACCGT +
Preference number: 4 (lower is better)
Translates to: ELVCPASKEDGNRCYSKTACLPP*LRPKDR
Trigger: ACGGTCCTTTGGCCTGAGGCAGGGCGGGAGGCATGC...AGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp AAGCACTTTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCGCCATGAAAACCAGATaGTCCTCGGCCCTTTGCGTT +
Preference number: 4 (lower is better)
Translates to: KHFGKEPDTHCLGERREGAMKTR*SSALCV
Trigger: AACGCAAAGGGCCGAGGAGCATCTGGTTTTCATGGC...GCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGATAAAGACAAGGGCCCGTATTTaGTCTCATACTTGGACACGA +
Preference number: 4 (lower is better)
Translates to: HCLGERREGTKQAEGGIKTRARI*SHTWTR
Trigger: TCGTGTCCAAGTATGAGACCAAATACGGGCCCTTGT...CTTTATCCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp AAGCACTTTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCCACGTGCGCAGGCCATaGTATAATGAAGCTGAGACG +
Preference number: 4 (lower is better)
Translates to: KHFGKEPDTHCLGERREGHVRRP*YNEAET
Trigger: CGTCTCAGCTTCATTATACCATGGCCTGCGCACGTG...GCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp AAGCACTTTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCCAAACGAGCTTCACATaGCCTCTGAGTAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KHFGKEPDTHCLGERREGQTSFT*PLSSLE
Trigger: CTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTG...GCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp GGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGAGGAAATTAGAGGTCAGGGCCTaGGACTCTGAACCACCACGG +
Preference number: 4 (lower is better)
Translates to: GLVGQTSFTWPLSSLERKLEVRA*DSEPPR
Trigger: CCGTGGTGGTTCAGAGTCCCAGGCCCTGACCTCTAA...TTTCCTCTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCAGAGCAATATCCACCTaGAAGTCATCTTTGCCATTT +
Preference number: 4 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPRAIST*KSSLPF
Trigger: AAATGGCAAAGATGACTTCCAGGTGGATATTGCTCT...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CAA 72 bp AAACTAAGGCTGAGTCACCCATCTACGCAGATTCTCTaGCGTTCCCCACCAGTGAGGAGACTGGCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: KLRLSHPSTQIL*RSPPVRRLAPQ
Trigger: CTGAGGGGCCAGTCTCCTCACTGGTGGGGAACGCAAGAGAATCTGCGTAGATGGGTGACTCAGCCTTAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp ACCACGGTAAATAAAGCCAGTGTTACGGAGGACGAAGCACGCCCATCGCCTCTGCCAGAGGTCCCCTTCTaGTTCAACTGGGACATCCAA +
Preference number: 4 (lower is better)
Translates to: TTVNKASVTEDEARPSPLPEVPF*FNWDIQ
Trigger: TTGGATGTCCCAGTTGAATCAGAAGGGGACCTCTGG...CAGAGGCGATGGGCGTGCTTCGTCCTCCGTAACACTGGCTTTATTTACCGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp ACCACGGTAAATAAAGCCAGTGTTACGGAGGACGAAGCACGCCCATCGCCTCTGGCTTCACATGGCCTCTaGGTAGCCTGGAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: TTVNKASVTEDEARPSPLASHGL*VAWRGN
Trigger: ATTTCCTCTCCAGGCTACTCAGAGGCCATGTGAAGC...CAGAGGCGATGGGCGTGCTTCGTCCTCCGTAACACTGGCTTTATTTACCGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp GAGCTGGTGTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTTCCTGGGACCAAGACTaGGGGGACCCTAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: ELVCPASKEDGNRCYSKTSWDQD*GDPRPV
Trigger: CACAGGCCTAGGGTCCCCTCAGTCTTGGTCCCAGGA...AGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp ACAGATGTCAAAGATCCAAGCACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCATACTTTTCATCCTTCTaGTCGTCGGGGACAAAGACC +
Preference number: 4 (lower is better)
Translates to: TDVKDPSTGAAVSSGRPPYFSSF*SSGTKT
Trigger: GGTCTTTGTCCCCGACGAGCAGAAGGATGAAAAGTA...TGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTGCTTGGATCTTTGACATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp GGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGAGGAAACGATGGTCTTGCACTTaGCCACCTCCTTGCGTAGCT +
Preference number: 4 (lower is better)
Translates to: GLVGQTSFTWPLSSLERKRWSCT*PPPCVA
Trigger: AGCTACGCAAGGAGGTGGGCAAGTGCAAGACCATCG...TTTCCTCTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp CGGCACTTCCAAGCCCATCGGGAACCCACAGAAAGCCAAGGTAAAGTCAACTTCTGGACACGATGGTCTTaGACTTGCCCACCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: RHFQAHREPTESQGKVNFWTRWS*TCPPPC
Trigger: GCAAGGAGGTGGGCAAGTGCAAGACCATCGTGTCCA...GAAGTTGACTTTACCTTGGCTTTCTGTGGGTTCCCGATGGGCTTGGAAGTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp ACAGATGTCAAAGATCCAAGCACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCACTCCCTCTCTCTAAATaGACACGTTCCTCCATCAGA +
Preference number: 4 (lower is better)
Translates to: TDVKDPSTGAAVSSGRPPLPLSK*TRSSIR
Trigger: TCTGATGGAGGAACGTGTGCATTTAGAGAGAGGGAG...TGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTGCTTGGATCTTTGACATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp AGGCCAAAGGACCGTAGGAGCGGCCTGCACAGCCCCTCAGCAGGGTTACATGTATCTGGAGTAGAGCTTTaGCATGAAAACCAGATGCTC +
Preference number: 4 (lower is better)
Translates to: RPKDRRSGLHSPSAGLHVSGVEL*HENQML
Trigger: GAGCATCTGGTTTTCATGGCAAAGCTCTACTCCAGA...TACATGTAACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGTCCTTTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAAAGATTCGCCATCATATaGGATGGTCTTGTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: CPADTLRAARMGEILKQERFAII*DGLVPD
Trigger: ATCTGGGACAAGACCATCCCATATGATGGCGAATCT...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CAGGGACGTCGCCACGTGCGCAGGCCATGGTATAATGAAGCTGAGACGTGGCCGTCCATGTACTCCAGGTaGAAAGATTCGCCATCATAT +
Preference number: 4 (lower is better)
Translates to: QGRRHVRRPWYNEAETWPSMYSR*KDSPSY
Trigger: ATATGATGGCGAATCTTTCCACCTGGAGTACATGGA...CGGCCACGTCTCAGCTTCATTATACCATGGCCTGCGCACGTGGCGACGTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CAGGGACGTCGCCACGTGCGCAGGCCATGGTATAATGAAGCTGAGACGTGGCCGATTTGGTCTCATACTTaGACACGATGGTCTTGCACT +
Preference number: 4 (lower is better)
Translates to: QGRRHVRRPWYNEAETWPIWSHT*TRWSCT
Trigger: AGTGCAAGACCATCGTGTCCAAGTATGAGACCAAAT...CGGCCACGTCTCAGCTTCATTATACCATGGCCTGCGCACGTGGCGACGTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp ACCACGGTAAATAAAGCCAGTGTTACGGAGGACGAAGCACGCCCATCGCCTCTGCAGACACACCTTAAGTaGAAACGCGCCCTGCTACCT +
Preference number: 4 (lower is better)
Translates to: TTVNKASVTEDEARPSPLQTHLK*KRALLP
Trigger: AGGTAGCAGGGCGCGTTTCCACTTAAGGTGTGTCTG...CAGAGGCGATGGGCGTGCTTCGTCCTCCGTAACACTGGCTTTATTTACCGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp GTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTGTCTGGGGGGCCTCTCTCAGCCCTaGCACTCATGGCTCAGACAG +
Preference number: 4 (lower is better)
Translates to: VSCFQGRWEQMLLKDCLGGLSQP*HSWLRQ
Trigger: CTGTCTGAGCCATGAGTGCCAGGGCTGAGAGAGGCC...CCCCAGACAGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAAGAAAACCTCTTCCTTTaGCCAAGGGTAAGAGTTACC +
Preference number: 4 (lower is better)
Translates to: CPADTLRAARMGEILKQEENLFL*PRVRVT
Trigger: GGTAACTCTTACCCTTGGCCAAAGGAAGAGGTTTTC...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp GAGCTGGTGTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTAAGAGAGGGGCCCGCTaGAATGCCAGCTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: ELVCPASKEDGNRCYSKTKRGAR*NASSQG
Trigger: TCCCTGGGAGCTGGCATTCCAGCGGGCCCCTCTCTT...AGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp GATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGGTGGTTACAATAGAGTaGAAGTGTGTACATGGTTTT +
Preference number: 4 (lower is better)
Translates to: DTHCLGERREGTKQAEGGVVTIE*KCVHGF
Trigger: AAAACCATGTACACACTTTCACTCTATTGTAACCAC...CCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp AAGCACTTTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCCTAGCCTCCAGTGACTaGCAGATGTCAAAGATCCAA +
Preference number: 4 (lower is better)
Translates to: KHFGKEPDTHCLGERREGLASSD*QMSKIQ
Trigger: TTGGATCTTTGACATCTGTCAGTCACTGGAGGCTAG...GCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CACATCGAGCCACCATCCCAGCCACCGGGCTCGGAACATGGACACCAGAGATTTTTCTCTAGCCTCCAGTaGCTGACAGATGTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: HIEPPSQPPGSEHGHQRFFSSLQ*LTDVKD
Trigger: ATCTTTGACATCTGTCAGTCACTGGAGGCTAGAGAA...AAATCTCTGGTGTCCATGTTCCGAGCCCGGTGGCTGGGATGGTGGCTCGATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp ACCACGGTAAATAAAGCCAGTGTTACGGAGGACGAAGCACGCCCATCGCCTCTGTCCTCAGCAAACTTGTaGTTCCGAGGGTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: TTVNKASVTEDEARPSPLSSANL*FRGLKS
Trigger: GCTCTTCAACCCTCGGAAGCACAAGTTTGCTGAGGA...CAGAGGCGATGGGCGTGCTTCGTCCTCCGTAACACTGGCTTTATTTACCGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp TGCCCTCTCTGGCTGGGAAGAAGGAATTTCTCTCTTGCCTCCTTCCCCCAACAACTTCTCCAGGAAGGCTaGCCGGATGGTGATCTGATT +
Preference number: 4 (lower is better)
Translates to: CPLWLGRRNFSLASFPQQLLQEG*PDGDLI
Trigger: AATCAGATCACCATCCGGGCAGCCTTCCTGGAGAAG...TTGTTGGGGGAAGGAGGCAAGAGAGAAATTCCTTCTTCCCAGCCAGAGAGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp TGCCCTCTCTGGCTGGGAAGAAGGAATTTCTCTCTTGCCTCCTTCCCCCAACAACCACAGCCAATGAAATaGAGAGACAGCCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: CPLWLGRRNFSLASFPQQPQPMK*RDSRWP
Trigger: AGGCCATCGGCTGTCTCTGCATTTCATTGGCTGTGG...TTGTTGGGGGAAGGAGGCAAGAGAGAAATTCCTTCTTCCCAGCCAGAGAGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp CACATCGAGCCACCATCCCAGCCACCGGGCTCGGAACATGGACACCAGAGATTTTCTGGAGTAGAGCTTTaGCATGAAAACCAGATGCTC +
Preference number: 4 (lower is better)
Translates to: HIEPPSQPPGSEHGHQRFSGVEL*HENQML
Trigger: GAGCATCTGGTTTTCATGGCAAAGCTCTACTCCAGA...AAATCTCTGGTGTCCATGTTCCGAGCCCGGTGGCTGGGATGGTGGCTCGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp TTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACACAAGGGCCCGTATTTaGTCTCATACTTGGACACGA +
Preference number: 4 (lower is better)
Translates to: LGKNPIPTAWGKEGRAPNTRARI*SHTWTR
Trigger: TCGTGTCCAAGTATGAGACCAAATACGGGCCCTTGT...GTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp GGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGAGGAAACAGACACACCTTAAGTaGAAACGCGCCCTGCTACCT +
Preference number: 4 (lower is better)
Translates to: GLVGQTSFTWPLSSLERKQTHLK*KRALLP
Trigger: AGGTAGCAGGGCGCGTTTCCACTTAAGGTGTGTCTG...TTTCCTCTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp TGCCCTCTCTGGCTGGGAAGAAGGAATTTCTCTCTTGCCTCCTTCCCCCAACAACAAACGAGCTTCACATaGCCTCTGAGTAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: CPLWLGRRNFSLASFPQQQTSFT*PLSSLE
Trigger: CTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTG...TTGTTGGGGGAAGGAGGCAAGAGAGAAATTCCTTCTTCCCAGCCAGAGAGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp ACCACGGTAAATAAAGCCAGTGTTACGGAGGACGAAGCACGCCCATCGCCTCTGAGACTGGACATTGGGTaGAAAGAAAGAGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: TTVNKASVTEDEARPSPLRLDIG*KERAGP
Trigger: TGGGCCTGCTCTTTCTTTCCACCCAATGTCCAGTCT...CAGAGGCGATGGGCGTGCTTCGTCCTCCGTAACACTGGCTTTATTTACCGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp TGCCCTCTCTGGCTGGGAAGAAGGAATTTCTCTCTTGCCTCCTTCCCCCAACAAGGTGGAAGGGGGCTGTaGAGGCATTTTCTAAACACC +
Preference number: 4 (lower is better)
Translates to: CPLWLGRRNFSLASFPQQGGRGL*RHFLNT
Trigger: GGTGTTTAGAAAATGCCTCCACAGCCCCCTTCCACC...TTGTTGGGGGAAGGAGGCAAGAGAGAAATTCCTTCTTCCCAGCCAGAGAGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCGTGAAAGTGTGTACATaGTTTTTAGAGAACCACAAA +
Preference number: 4 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPVKVCT*FLENHK
Trigger: TTTGTGGTTCTCTAAAAACCATGTACACACTTTCAC...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp GAGCTGGTGTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTCCGATACCCACTGCCTaGGGGAAAGAAGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: ELVCPASKEDGNRCYSKTPIPTA*GKEGRA
Trigger: TGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGG...AGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CAA 72 bp AGAGTCCAGCAGCCACACTCTTTCCAAGTAAGCACTTaGGGAAAGAACCCGATACCCACTGCCTGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: RVQQPHSFQVST*GKNPIPTAWGK
Trigger: TTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTTACTTGGAAAGAGTGTGGCTGCTGGACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp GAGCTGGTGTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTCGGCGGGGTCCGGATTaGAGTTCACATCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: ELVCPASKEDGNRCYSKTRRGPD*SSHPLP
Trigger: TGGAAGTGGATGTGAACTTCAATCCGGACCCCGCCG...AGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp CGGCACTTCCAAGCCCATCGGGAACCCACAGAAAGCCAAGGTAAAGTCAACTTCAGTAGAGCTTTGCCATaGAAACCAGATGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: RHFQAHREPTESQGKVNFSRALP*KPDAPR
Trigger: CCGAGGAGCATCTGGTTTTCATGGCAAAGCTCTACT...GAAGTTGACTTTACCTTGGCTTTCTGTGGGTTCCCGATGGGCTTGGAAGTGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp ACCACGGTAAATAAAGCCAGTGTTACGGAGGACGAAGCACGCCCATCGCCTCTGCTCCCTCTCTCTAAATaGACACGTTCCTCCATCAGA +
Preference number: 4 (lower is better)
Translates to: TTVNKASVTEDEARPSPLLPLSK*TRSSIR
Trigger: TCTGATGGAGGAACGTGTGCATTTAGAGAGAGGGAG...CAGAGGCGATGGGCGTGCTTCGTCCTCCGTAACACTGGCTTTATTTACCGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp GGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGAGGAAACATACTTGGACACGATaGTCTTGCACTTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: GLVGQTSFTWPLSSLERKHTWTR*SCTCPP
Trigger: AGGTGGGCAAGTGCAAGACCATCGTGTCCAAGTATG...TTTCCTCTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CACATCGAGCCACCATCCCAGCCACCGGGCTCGGAACATGGACACCAGAGATTTATTTGGTCTCATACTTaGACACGATGGTCTTGCACT +
Preference number: 4 (lower is better)
Translates to: HIEPPSQPPGSEHGHQRFIWSHT*TRWSCT
Trigger: AGTGCAAGACCATCGTGTCCAAGTATGAGACCAAAT...AAATCTCTGGTGTCCATGTTCCGAGCCCGGTGGCTGGGATGGTGGCTCGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp GTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTGTCTGGGGATAGGCTGCCCGCCCTaGGCAAATAAACACACCCAT +
Preference number: 4 (lower is better)
Translates to: VSCFQGRWEQMLLKDCLGIGCPP*ANKHTH
Trigger: ATGGGTGTGTTTATTTGCTCAGGGCGGGCAGCCTAT...CCCCAGACAGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp GTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTGTCTGGGGCCAGGGAAGATTCTGTaGTGGACACGGTTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: VSCFQGRWEQMLLKDCLGPGKIL*WTRFQR
Trigger: CCTCTGAAACCGTGTCCAGCACAGAATCTTCCCTGG...CCCCAGACAGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp AAGCACTTTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCCCACGTTGTTCTTCTTaGGTCTTGTCCAGTACTTTT +
Preference number: 4 (lower is better)
Translates to: KHFGKEPDTHCLGERREGPRCSS*VLSSTF
Trigger: AAAAGTACTGGACAAGACGCAAGAAGAACAACGTGG...GCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp GTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTGTCTGGGGCTTCTCCAGGAAGGCTaGCCGGATGGTGATCTGATT +
Preference number: 4 (lower is better)
Translates to: VSCFQGRWEQMLLKDCLGLLQEG*PDGDLI
Trigger: AATCAGATCACCATCCGGGCAGCCTTCCTGGAGAAG...CCCCAGACAGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp GTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTGTCTGGGGGGAGCTGGTGTGTCCTaGTTCCAAGGAAGATGGGAA +
Preference number: 4 (lower is better)
Translates to: VSCFQGRWEQMLLKDCLGGAGVS*FQGRWE
Trigger: TTCCCATCTTCCTTGGAAGCAGGACACACCAGCTCC...CCCCAGACAGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACAC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp ACCACGGTAAATAAAGCCAGTGTTACGGAGGACGAAGCACGCCCATCGCCTCTGAGATTCGCCATCATATaGGATGGTCTTGTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: TTVNKASVTEDEARPSPLRFAII*DGLVPD
Trigger: ATCTGGGACAAGACCATCCCATATGATGGCGAATCT...CAGAGGCGATGGGCGTGCTTCGTCCTCCGTAACACTGGCTTTATTTACCGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
3UTR CAA 72 bp TCCAACCTCAGAAGCCAGACAGGAAAACCTCTTCCTTaGGCCAAGGGTAAGAGTTACCCAGGTCCTCCACAA +
Preference number: 4 (lower is better)
Translates to: SNLRSQTGKPLP*AKGKSYPGPPQ
Trigger: TTGTGGAGGACCTGGGTAACTCTTACCCTTGGCCAAAGGAAGAGGTTTTCCTGTCTGGCTTCTGAGGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp GAGCTGGTGTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTATAGGCTGCCCGCCCTaGGCAAATAAACACACCCAT +
Preference number: 4 (lower is better)
Translates to: ELVCPASKEDGNRCYSKTIGCPP*ANKHTH
Trigger: ATGGGTGTGTTTATTTGCTCAGGGCGGGCAGCCTAT...AGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp GTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTGTCTGGGGTCCTCAGCAAACTTGTaGTTCCGAGGGTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VSCFQGRWEQMLLKDCLGSSANL*FRGLKS
Trigger: GCTCTTCAACCCTCGGAAGCACAAGTTTGCTGAGGA...CCCCAGACAGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp TTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACTGCTTCCAAGGAAGATaGGAACAGATGTTACTCAAA +
Preference number: 4 (lower is better)
Translates to: LGKNPIPTAWGKEGRAPNCFQGR*EQMLLK
Trigger: TTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCA...GTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp TTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGAGCAATATCCACCTaGAAGTCATCTTTGCCATTT +
Preference number: 4 (lower is better)
Translates to: LGKNPIPTAWGKEGRAPNRAIST*KSSLPF
Trigger: AAATGGCAAAGATGACTTCCAGGTGGATATTGCTCT...GTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp CGGCACTTCCAAGCCCATCGGGAACCCACAGAAAGCCAAGGTAAAGTCAACTTCTCCATGTACTCCAGGTaGAAAGATTCGCCATCATAT +
Preference number: 4 (lower is better)
Translates to: RHFQAHREPTESQGKVNFSMYSR*KDSPSY
Trigger: ATATGATGGCGAATCTTTCCACCTGGAGTACATGGA...GAAGTTGACTTTACCTTGGCTTTCTGTGGGTTCCCGATGGGCTTGGAAGTGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp GAGCTGGTGTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTATGCTGTGGAAGAGCTaGCAGACTCCTTCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: ELVCPASKEDGNRCYSKTMLWKS*QTPSLL
Trigger: TAGAAGGGAAGGAGTCTGCCAGCTCTTCCACAGCAT...AGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp GAGCTGGTGTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTCATACTTGGACACGATaGTCTTGCACTTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: ELVCPASKEDGNRCYSKTHTWTR*SCTCPP
Trigger: AGGTGGGCAAGTGCAAGACCATCGTGTCCAAGTATG...AGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp GAGCTGGTGTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTAACCAAGTGGTGTTCTaGCATCCCCAACACCGTAAG +
Preference number: 4 (lower is better)
Translates to: ELVCPASKEDGNRCYSKTNQVVF*HPQHRK
Trigger: CTTACGGTGTTGGGGATGCCAGAACACCACTTGGTT...AGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CCA 90 bp AAGCACTTTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCGTGAAAGTGTGTACATaGTTTTTAGAGAACCACAAA +
Preference number: 4 (lower is better)
Translates to: KHFGKEPDTHCLGERREGVKVCT*FLENHK
Trigger: TTTGTGGTTCTCTAAAAACCATGTACACACTTTCAC...GCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR GCA 90 bp GTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTGTCTGGGGCCACGTTGTTCTTCTTaGGTCTTGTCCAGTACTTTT +
Preference number: 4 (lower is better)
Translates to: VSCFQGRWEQMLLKDCLGPRCSS*VLSSTF
Trigger: AAAAGTACTGGACAAGACGCAAGAAGAACAACGTGG...CCCCAGACAGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR TCA 90 bp GAGCTGGTGTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTGTGGTTACAATAGAGTaGAAGTGTGTACATGGTTTT +
Preference number: 4 (lower is better)
Translates to: ELVCPASKEDGNRCYSKTVVTIE*KCVHGF
Trigger: AAAACCATGTACACACTTTCACTCTATTGTAACCAC...AGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS GCA 90 bp GCGGGTCCACAGGCGGCTTCTTTCCGCCGCCCGCGTCGGACATCGTaGCCCGGACTCGGCTCGCGCACCTCGCCTCCCCCGCCCGCCCCC +
Preference number: 5 (lower is better)
Translates to: AGPQAASFRRPRRTS*PGLGSRTSPPPPAP
Trigger: GGGGGCGGGCGGGGGAGGCGAGGTGCGCGAGCCGAGTCCGGGGCACGATGTCCGACGCGGGCGGCGGAAAGAAGCCGCCTGTGGACCCGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266304.9
CDS CCA 90 bp CACAGCCCAGCAGGAGGTGCTTGCTCCAGGGAGTTCAGAGGCAGCTaGAGAGGCAGGGGCCGCCAGCCGCAGGCTAGGGAGGCAGGCGGG +
Preference number: 5 (lower is better)
Translates to: HSPAGGACSREFRGS*RGRGRQPQAREAGG
Trigger: CCCGCCTGCCTCCCTAGCCTGCGGCTGGCGGCCCCTGCCTCTCCAGCTGCCTCTGAACTCCCTGGAGCAAGCACCTCCTGCTGGGCTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406644.7
CDS-3UTR CAA 90 bp CCTCCCTTGGCCTCAGGGCCCCTTGTCAAGTCCCCCGGAGAGGTGGGTGTGCAGCACTTGCCCACCTCCTaGCGTAGCTCGGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: PPLASGPLVKSPGEVGVQHLPTS*RSSATS
Trigger: GGAGGTGGCCGAGCTACGCAAGGAGGTGGGCAAGTG...CTGCACACCCACCTCTCCGGGGGACTTGACAAGGGGCCCTGAGGCCAAGGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS TCA 90 bp GCTGGGGCTTCAGGTCCTCCTCAGCAAACTTGTGCTTCCGAGGGTTaGAGAGCTCCCCGCCTGGCACACTGGAGAGCACCAGGTCGGCGG +
Preference number: 5 (lower is better)
Translates to: AGASGPPQQTCASEG*RAPRLAHWRAPGRR
Trigger: CCGCCGACCTGGTGCTCTCCAGTGTGCCAGGCGGGGAGCTCTTCAACCCTCGGAAGCACAAGTTTGCTGAGGAGGACCTGAAGCCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266304.9
ENST00000406644.7
ENST00000413942.1
CDS-3UTR CAA 90 bp CAAAGGGCCGTGGCATTCCCCTGGGGTGAGGTCCACGGCTTGGTCTTAACGTCTTGGCCTCAGGGCCCCTaGTCAAGTCCCCCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: QRAVAFPWGEVHGLVLTSWPQGP*SSPPER
Trigger: CCTCTCCGGGGGACTTGACAAGGGGCCCTGAGGCCA...AGACGTTAAGACCAAGCCGTGGACCTCACCCCAGGGGAATGCCACGGCCCTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp CACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAAGAAGCAGAGGGCCCAGGAGATGAGAACCGCCCTCTaGGTGATCCACCAGGCCAGA +
Preference number: 5 (lower is better)
Translates to: HRSRSLQRSASKKQRAQEMRTAL*VIHQAR
Trigger: TCTGGCCTGGTGGATCACCAAGAGGGCGGTTCTCAT...CTCCTGGGCCCTCTGCTTCTTGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp GATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGATGCTCCTCGGCCCTTaGCGTTCCAAGGAGCACGGC +
Preference number: 5 (lower is better)
Translates to: DTHCLGERREGTKQAEGGMLLGP*RSKEHG
Trigger: GCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCAT...CCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp ACAGATGTCAAAGATCCAAGCACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAGGCGGGGTGGGAGCCTaGAGGCAGCCAATGGCCAGC +
Preference number: 5 (lower is better)
Translates to: TDVKDPSTGAAVSSGRPPGGVGA*RQPMAS
Trigger: GCTGGCCATTGGCTGCCTCAAGGCTCCCACCCCGCC...TGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTGCTTGGATCTTTGACATCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406644.7
CDS-3UTR CAA 90 bp TGCCCTGCTGACACCCTCCGGGCAGCTCGCATGGGAGAGATCCTGAAGCAAGAACACTTGCCCACCTCCTaGCGTAGCTCGGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: CPADTLRAARMGEILKQEHLPTS*RSSATS
Trigger: GGAGGTGGCCGAGCTACGCAAGGAGGTGGGCAAGTG...TTCTTGCTTCAGGATCTCTCCCATGCGAGCTGCCCGGAGGGTGTCAGCAGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS TCA 90 bp CAGCAGGGACTTGAGGACCTCAGGCATGTCCATGGCAGGGGCCACTaGGAACCAGTCGCAGCTCACACAGCCCAGCAGGAGGTGCTTGCT +
Preference number: 5 (lower is better)
Translates to: QQGLEDLRHVHGRGH*EPVAAHTAQQEVLA
Trigger: AGCAAGCACCTCCTGCTGGGCTGTGTGAGCTGCGACTGGTTCTCAGTGGCCCCTGCCATGGACATGCCTGAGGTCCTCAAGTCCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406644.7
CDS-3UTR CAA 90 bp CCTCCCTTGGCCTCAGGGCCCCTTGTCAAGTCCCCCGGAGAGGTGGGTGTGCAGTCATATGGGATGGTCTaGTCCCAGATGGGTGGCATG +
Preference number: 5 (lower is better)
Translates to: PPLASGPLVKSPGEVGVQSYGMV*SQMGGM
Trigger: CATGCCACCCATCTGGGACAAGACCATCCCATATGA...CTGCACACCCACCTCTCCGGGGGACTTGACAAGGGGCCCTGAGGCCAAGGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCTCCACTTCCACACAATaGGGGTCGATGGGACTGGGA +
Preference number: 5 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPSTSTQ*GSMGLG
Trigger: TCCCAGTCCCATCGACCCCAATTGTGTGGAAGTGGA...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp TTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACTGGCCTCAGGGCCCCTaGTCAAGTCCCCCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: LGKNPIPTAWGKEGRAPNWPQGP*SSPPER
Trigger: CCTCTCCGGGGGACTTGACAAGGGGCCCTGAGGCCA...GTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp ACAGATGTCAAAGATCCAAGCACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCATTTTCCCCCACTGGCTaGCATGCCTCCCGCCCTGCC +
Preference number: 5 (lower is better)
Translates to: TDVKDPSTGAAVSSGRPPFSPTG*HASRPA
Trigger: GGCAGGGCGGGAGGCATGCAAGCCAGTGGGGGAAAA...TGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTGCTTGGATCTTTGACATCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS CCA 90 bp CTCCTCAGCAAACTTGTGCTTCCGAGGGTTGAAGAGCTCCCCGCCTaGCACACTGGAGAGCACCAGGTCGGCGGGGTCCGGATTGAAGTT +
Preference number: 5 (lower is better)
Translates to: LLSKLVLPRVEELPA*HTGEHQVGGVRIEV
Trigger: AACTTCAATCCGGACCCCGCCGACCTGGTGCTCTCCAGTGTGCCAGGCGGGGAGCTCTTCAACCCTCGGAAGCACAAGTTTGCTGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266304.9
ENST00000406644.7
ENST00000413942.1
CDS-3UTR CAA 90 bp CACATCGAGCCACCATCCCAGCCACCGGGCTCGGAACATGGACACCAGAGATTTTTGTGCTTCCGAGGGTaGAAGAGCTCCCCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: HIEPPSQPPGSEHGHQRFLCFRG*KSSPPG
Trigger: GCCAGGCGGGGAGCTCTTCAACCCTCGGAAGCACAA...AAATCTCTGGTGTCCATGTTCCGAGCCCGGTGGCTGGGATGGTGGCTCGATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp GAAAGAGCAGGCCCAGAGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCTTGTGCTTCCGAGGGTaGAAGAGCTCCCCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: ERAGPEAWSSGTNELHMALCFRG*KSSPPG
Trigger: GCCAGGCGGGGAGCTCTTCAACCCTCGGAAGCACAA...GGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCTCTGGGCCTGCTCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCTCCTCCTCAGCAAACTaGTGCTTCCGAGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPSSSAN*CFRGLK
Trigger: CTTCAACCCTCGGAAGCACAAGTTTGCTGAGGAGGA...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp CACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCAAGAAGCAGAGGGCCCAGGAGTACAAGGGCCCGTATTaGGTCTCATACTTGGACACG +
Preference number: 5 (lower is better)
Translates to: HRSRSLQRSASKKQRAQEYKGPY*VSYLDT
Trigger: CGTGTCCAAGTATGAGACCAAATACGGGCCCTTGTA...CTCCTGGGCCCTCTGCTTCTTGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp AGGCCAAAGGACCGTAGGAGCGGCCTGCACAGCCCCTCAGCAGGGTTACATGTAATCCTGAAGCAAGAATaGCGAGGCCCCAGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: RPKDRRSGLHSPSAGLHVILKQE*RGPSCP
Trigger: GGGGCAGCTGGGGCCTCGCAATTCTTGCTTCAGGAT...TACATGTAACCCTGCTGAGGGGCTGTGCAGGCCGCTCCTACGGTCCTTTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp CCTCCCTTGGCCTCAGGGCCCCTTGTCAAGTCCCCCGGAGAGGTGGGTGTGCAGGGGACAAAGACCTTCTaGGCCTTTTTGATCATAGGC +
Preference number: 5 (lower is better)
Translates to: PPLASGPLVKSPGEVGVQGTKTF*AFLIIG
Trigger: GCCTATGATCAAAAAGGCCAAGAAGGTCTTTGTCCC...CTGCACACCCACCTCTCCGGGGGACTTGACAAGGGGCCCTGAGGCCAAGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp TTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACATGCTCCTCGGCCCTTaGCGTTCCAAGGAGCACGGC +
Preference number: 5 (lower is better)
Translates to: LGKNPIPTAWGKEGRAPNMLLGP*RSKEHG
Trigger: GCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCAT...GTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCATCCAAGACTGGACATaGGGTGGAAAGAAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPIQDWT*GGKKEQ
Trigger: CTGCTCTTTCTTTCCACCCAATGTCCAGTCTTGGAT...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp AAACCAGATGCTCCTCGGCCCTTTGCGTTCCAAGGAGCACGGCTCCCGGGGCCCTTCCAAGTAAGCACTTaGGGAAAGAACCCGATACCC +
Preference number: 5 (lower is better)
Translates to: KPDAPRPFAFQGARLPGPFQVST*GKNPIP
Trigger: GGGTATCGGGTTCTTTCCCAAAGTGCTTACTTGGAA...GGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp CCTCCCTTGGCCTCAGGGCCCCTTGTCAAGTCCCCCGGAGAGGTGGGTGTGCAGCAGCTCATTCATGATTaGTCTGTTCTGAGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: PPLASGPLVKSPGEVGVQQLIHD*SVLRLH
Trigger: GTGCAACCTCAGAACAGACAAATCATGAATGAGCTG...CTGCACACCCACCTCTCCGGGGGACTTGACAAGGGGCCCTGAGGCCAAGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS CCA 90 bp CAGAGGGCTGAAAGATGGCAGTGGAGGAGGATGGTGGGGATGCTGTaGAAGAGCTGGCAGACTCCTTCCCTTCTAGCTCTGCTACAGGCA +
Preference number: 5 (lower is better)
Translates to: QRAERWQWRRMVGML*KSWQTPSLLALLQA
Trigger: TGCCTGTAGCAGAGCTAGAAGGGAAGGAGTCTGCCAGCTCTTCCACAGCATCCCCACCATCCTCCTCCACTGCCATCTTTCAGCCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266304.9
ENST00000406644.7
ENST00000413942.1
CDS-3UTR CAA 90 bp ACAGATGTCAAAGATCCAAGCACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCATCCACTTCCACACAATaGGGGTCGATGGGACTGGGA +
Preference number: 5 (lower is better)
Translates to: TDVKDPSTGAAVSSGRPPSTSTQ*GSMGLG
Trigger: TCCCAGTCCCATCGACCCCAATTGTGTGGAAGTGGA...TGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTGCTTGGATCTTTGACATCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp AAGCACTTTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCTCGGCGGGGTCCGGATaGAAGTTCACATCCACTTCC +
Preference number: 5 (lower is better)
Translates to: KHFGKEPDTHCLGERREGSAGSG*KFTSTS
Trigger: GGAAGTGGATGTGAACTTCAATCCGGACCCCGCCGA...GCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp CAGGGACGTCGCCACGTGCGCAGGCCATGGTATAATGAAGCTGAGACGTGGCCGACCTTCTTGGCCTTTTaGATCATAGGCTGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: QGRRHVRRPWYNEAETWPTFLAF*IIGWGF
Trigger: GAAGCCCCAGCCTATGATCAAAAAGGCCAAGAAGGT...CGGCCACGTCTCAGCTTCATTATACCATGGCCTGCGCACGTGGCGACGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp GATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGGCCACGTTGTTCTTCTaGCGTCTTGTCCAGTACTTT +
Preference number: 5 (lower is better)
Translates to: DTHCLGERREGTKQAEGGATLFF*RLVQYF
Trigger: AAAGTACTGGACAAGACGCAAGAAGAACAACGTGGC...CCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp CACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGATAAAGGGTGAGGTCCACGGCTaGGTCTTAACGTCTGTTATG +
Preference number: 5 (lower is better)
Translates to: HCLGERREGTKQAEGGIKGEVHG*VLTSVM
Trigger: CATAACAGACGTTAAGACCAAGCCGTGGACCTCACC...CTTTATCCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp GATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGGGAAAACCTCTTCCTTaGGCCAAGGGTAAGAGTTAC +
Preference number: 5 (lower is better)
Translates to: DTHCLGERREGTKQAEGGGKPLP*AKGKSY
Trigger: GTAACTCTTACCCTTGGCCAAAGGAAGAGGTTTTCC...CCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp GATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACAGGCAGAGGGCGGGGAAGGAATTTCTCTCTaGCCTCCTTCCCCCAACAAA +
Preference number: 5 (lower is better)
Translates to: DTHCLGERREGTKQAEGGEGISL*PPSPNK
Trigger: TTTGTTGGGGGAAGGAGGCAAGAGAGAAATTCCTTC...CCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp AGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGTCTACGCAGATTCTCTaGCGTTCCCCACCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: RPGLVGQTSFTWPLSSLESTQIL*RSPPVR
Trigger: CCTCACTGGTGGGGAACGCAAGAGAATCTGCGTAGA...CTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp GAAAGAGCAGGCCCAGAGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCGGTGAGGTCCACGGCTaGGTCTTAACGTCTGTTATG +
Preference number: 5 (lower is better)
Translates to: ERAGPEAWSSGTNELHMAGEVHG*VLTSVM
Trigger: CATAACAGACGTTAAGACCAAGCCGTGGACCTCACC...GGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCTCTGGGCCTGCTCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp CAGGGACGTCGCCACGTGCGCAGGCCATGGTATAATGAAGCTGAGACGTGGCCGGAAGGAATTTCTCTCTaGCCTCCTTCCCCCAACAAA +
Preference number: 5 (lower is better)
Translates to: QGRRHVRRPWYNEAETWPEGISL*PPSPNK
Trigger: TTTGTTGGGGGAAGGAGGCAAGAGAGAAATTCCTTC...CGGCCACGTCTCAGCTTCATTATACCATGGCCTGCGCACGTGGCGACGTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp TGCCCTCTCTGGCTGGGAAGAAGGAATTTCTCTCTTGCCTCCTTCCCCCAACAATGCTCCAGCAGGGACTaGAGGACCTCAGGCATGTCC +
Preference number: 5 (lower is better)
Translates to: CPLWLGRRNFSLASFPQQCSSRD*RTSGMS
Trigger: GGACATGCCTGAGGTCCTCAAGTCCCTGCTGGAGCA...TTGTTGGGGGAAGGAGGCAAGAGAGAAATTCCTTCTTCCCAGCCAGAGAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406644.7
CDS CCA 90 bp AAGATTCTGTGCTGGACACGGTTTCAGAGGGCTGAAAGATGGCAGTaGAGGAGGATGGTGGGGATGCTGTGGAAGAGCTGGCAGACTCCT +
Preference number: 5 (lower is better)
Translates to: KILCWTRFQRAERWQ*RRMVGMLWKSWQTP
Trigger: AGGAGTCTGCCAGCTCTTCCACAGCATCCCCACCATCCTCCTCCACTGCCATCTTTCAGCCCTCTGAAACCGTGTCCAGCACAGAATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266304.9
ENST00000406644.7
ENST00000413942.1
CDS-3UTR CAA 90 bp TGCCCTCTCTGGCTGGGAAGAAGGAATTTCTCTCTTGCCTCCTTCCCCCAACAAACGATGGTCTTGCACTaGCCCACCTCCTTGCGTAGC +
Preference number: 5 (lower is better)
Translates to: CPLWLGRRNFSLASFPQQTMVLH*PTSLRS
Trigger: GCTACGCAAGGAGGTGGGCAAGTGCAAGACCATCGT...TTGTTGGGGGAAGGAGGCAAGAGAGAAATTCCTTCTTCCCAGCCAGAGAGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp GGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGAGGAAAATGAGAACCGCCCTCTaGGTGATCCACCAGGCCAGA +
Preference number: 5 (lower is better)
Translates to: GLVGQTSFTWPLSSLERKMRTAL*VIHQAR
Trigger: TCTGGCCTGGTGGATCACCAAGAGGGCGGTTCTCAT...TTTCCTCTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp GAGCTGGTGTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTTTTTCCCCCACTGGCTaGCATGCCTCCCGCCCTGCC +
Preference number: 5 (lower is better)
Translates to: ELVCPASKEDGNRCYSKTFSPTG*HASRPA
Trigger: GGCAGGGCGGGAGGCATGCAAGCCAGTGGGGGAAAA...AGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS CCA 90 bp TGCTCGTCGGGGACAAAGACCTTCTTGGCCTTTTTGATCATAGGCTaGGGCTTCAGGTCCTCCTCAGCAAACTTGTGCTTCCGAGGGTTG +
Preference number: 5 (lower is better)
Translates to: CSSGTKTFLAFLIIG*GFRSSSANLCFRGL
Trigger: CAACCCTCGGAAGCACAAGTTTGCTGAGGAGGACCTGAAGCCCCAGCCTATGATCAAAAAGGCCAAGAAGGTCTTTGTCCCCGACGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp TTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCACCAAACACCTTCTTGGCCTTTTaGATCATAGGCTGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: LGKNPIPTAWGKEGRAPNTFLAF*IIGWGF
Trigger: GAAGCCCCAGCCTATGATCAAAAAGGCCAAGAAGGT...GTTTGGTGCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp GAAAGAGCAGGCCCAGAGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCGGGACAAAGACCTTCTaGGCCTTTTTGATCATAGGC +
Preference number: 5 (lower is better)
Translates to: ERAGPEAWSSGTNELHMAGTKTF*AFLIIG
Trigger: GCCTATGATCAAAAAGGCCAAGAAGGTCTTTGTCCC...GGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCTCTGGGCCTGCTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp AGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGTACAAGGGCCCGTATTaGGTCTCATACTTGGACACG +
Preference number: 5 (lower is better)
Translates to: RPGLVGQTSFTWPLSSLEYKGPY*VSYLDT
Trigger: CGTGTCCAAGTATGAGACCAAATACGGGCCCTTGTA...CTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp CACATCGAGCCACCATCCCAGCCACCGGGCTCGGAACATGGACACCAGAGATTTTTCCAAGTAAGCACTTaGGGAAAGAACCCGATACCC +
Preference number: 5 (lower is better)
Translates to: HIEPPSQPPGSEHGHQRFFQVST*GKNPIP
Trigger: GGGTATCGGGTTCTTTCCCAAAGTGCTTACTTGGAA...AAATCTCTGGTGTCCATGTTCCGAGCCCGGTGGCTGGGATGGTGGCTCGATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp CGGCACTTCCAAGCCCATCGGGAACCCACAGAAAGCCAAGGTAAAGTCAACTTCTCATATGGGATGGTCTaGTCCCAGATGGGTGGCATG +
Preference number: 5 (lower is better)
Translates to: RHFQAHREPTESQGKVNFSYGMV*SQMGGM
Trigger: CATGCCACCCATCTGGGACAAGACCATCCCATATGA...GAAGTTGACTTTACCTTGGCTTTCTGTGGGTTCCCGATGGGCTTGGAAGTGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp GGTCTAGTGGGACAAACGAGCTTCACATGGCCTCTGAGTAGCCTGGAGAGGAAATCCTCCTCAGCAAACTaGTGCTTCCGAGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: GLVGQTSFTWPLSSLERKSSSAN*CFRGLK
Trigger: CTTCAACCCTCGGAAGCACAAGTTTGCTGAGGAGGA...TTTCCTCTCCAGGCTACTCAGAGGCCATGTGAAGCTCGTTTGTCCCACTAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp GTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTGTCTGGGGACGATGGTCTTGCACTaGCCCACCTCCTTGCGTAGC +
Preference number: 5 (lower is better)
Translates to: VSCFQGRWEQMLLKDCLGTMVLH*PTSLRS
Trigger: GCTACGCAAGGAGGTGGGCAAGTGCAAGACCATCGT...CCCCAGACAGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp GAAAGAGCAGGCCCAGAGGCCTGGTCTAGTGGGACAAACGAGCTTCACATGGCCTATTTGGTCTCATACTaGGACACGATGGTCTTGCAC +
Preference number: 5 (lower is better)
Translates to: ERAGPEAWSSGTNELHMAYLVSY*DTMVLH
Trigger: GTGCAAGACCATCGTGTCCAAGTATGAGACCAAATA...GGCCATGTGAAGCTCGTTTGTCCCACTAGACCAGGCCTCTGGGCCTGCTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp AAGCACTTTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCATCCAAGACTGGACATaGGGTGGAAAGAAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: KHFGKEPDTHCLGERREGIQDWT*GGKKEQ
Trigger: CTGCTCTTTCTTTCCACCCAATGTCCAGTCTTGGAT...GCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp ACAGATGTCAAAGATCCAAGCACAGGAGCCGCAGTCTCCAGCGGTCGGCCTCCATGTTCTTCTTGCGTCTaGTCCAGTACTTTTCATCCT +
Preference number: 5 (lower is better)
Translates to: TDVKDPSTGAAVSSGRPPCSSCV*SSTFHP
Trigger: AGGATGAAAAGTACTGGACAAGACGCAAGAAGAACA...TGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTGCTTGGATCTTTGACATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp AAGCACTTTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCTATTTGGTCTCATACTaGGACACGATGGTCTTGCAC +
Preference number: 5 (lower is better)
Translates to: KHFGKEPDTHCLGERREGYLVSY*DTMVLH
Trigger: GTGCAAGACCATCGTGTCCAAGTATGAGACCAAATA...GCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp ACCACGGTAAATAAAGCCAGTGTTACGGAGGACGAAGCACGCCCATCGCCTCTGGGAAAACCTCTTCCTTaGGCCAAGGGTAAGAGTTAC +
Preference number: 5 (lower is better)
Translates to: TTVNKASVTEDEARPSPLGKPLP*AKGKSY
Trigger: GTAACTCTTACCCTTGGCCAAAGGAAGAGGTTTTCC...CAGAGGCGATGGGCGTGCTTCGTCCTCCGTAACACTGGCTTTATTTACCGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp AAGCACTTTGGGAAAGAACCCGATACCCACTGCCTGGGGGAAAGAAGGGAGGGCTGTTCTTCTTGCGTCTaGTCCAGTACTTTTCATCCT +
Preference number: 5 (lower is better)
Translates to: KHFGKEPDTHCLGERREGCSSCV*SSTFHP
Trigger: AGGATGAAAAGTACTGGACAAGACGCAAGAAGAACA...GCCCTCCCTTCTTTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp GTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTGTCTGGGGCGTTTAGCTGCCACGTaGTTCTTCTTGCGTCTTGTC +
Preference number: 5 (lower is better)
Translates to: VSCFQGRWEQMLLKDCLGRLAAT*FFLRLV
Trigger: GACAAGACGCAAGAAGAACAACGTGGCAGCTAAACG...CCCCAGACAGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp TGCCCTCTCTGGCTGGGAAGAAGGAATTTCTCTCTTGCCTCCTTCCCCCAACAACAGCTCATTCATGATTaGTCTGTTCTGAGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: CPLWLGRRNFSLASFPQQQLIHD*SVLRLH
Trigger: GTGCAACCTCAGAACAGACAAATCATGAATGAGCTG...TTGTTGGGGGAAGGAGGCAAGAGAGAAATTCCTTCTTCCCAGCCAGAGAGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp GTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTGTCTGGGGGCCACGTTGTTCTTCTaGCGTCTTGTCCAGTACTTT +
Preference number: 5 (lower is better)
Translates to: VSCFQGRWEQMLLKDCLGATLFF*RLVQYF
Trigger: AAAGTACTGGACAAGACGCAAGAAGAACAACGTGGC...CCCCAGACAGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS-3UTR CAA 90 bp GAGCTGGTGTGTCCTGCTTCCAAGGAAGATGGGAACAGATGTTACTCAAAGACTCGTTTAGCTGCCACGTaGTTCTTCTTGCGTCTTGTC +
Preference number: 5 (lower is better)
Translates to: ELVCPASKEDGNRCYSKTRLAAT*FFLRLV
Trigger: GACAAGACGCAAGAAGAACAACGTGGCAGCTAAACG...AGTCTTTGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS GCA 72 bp CAGGCGGCTTCTTTCCGCCGCCCGCGTCGGACATCGTaGCCCGGACTCGGCTCGCGCACCTCGCCTCCCCCG +
Preference number: 6 (lower is better)
Translates to: QAASFRRPRRTS*PGLGSRTSPPP
Trigger: CGGGGGAGGCGAGGTGCGCGAGCCGAGTCCGGGGCACGATGTCCGACGCGGGCGGCGGAAAGAAGCCGCCTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266304.9
CDS CAA 72 bp CAGCCGCAGGCTAGGGAGGCAGGCGGGGTGGGAGCCTaGAGGCAGCCAATGGCCAGCACCAGTCCCAGCCCG +
Preference number: 6 (lower is better)
Translates to: QPQAREAGGVGA*RQPMASTSPSP
Trigger: CGGGCTGGGACTGGTGCTGGCCATTGGCTGCCTCAAGGCTCCCACCCCGCCTGCCTCCCTAGCCTGCGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406644.7
CDS CCA 72 bp GCAGGAGGTGCTTGCTCCAGGGAGTTCAGAGGCAGCTaGAGAGGCAGGGGCCGCCAGCCGCAGGCTAGGGAG +
Preference number: 6 (lower is better)
Translates to: AGGACSREFRGS*RGRGRQPQARE
Trigger: CTCCCTAGCCTGCGGCTGGCGGCCCCTGCCTCTCCAGCTGCCTCTGAACTCCCTGGAGCAAGCACCTCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406644.7
CDS CCA 72 bp AAACTTGTGCTTCCGAGGGTTGAAGAGCTCCCCGCCTaGCACACTGGAGAGCACCAGGTCGGCGGGGTCCGG +
Preference number: 6 (lower is better)
Translates to: KLVLPRVEELPA*HTGEHQVGGVR
Trigger: CCGGACCCCGCCGACCTGGTGCTCTCCAGTGTGCCAGGCGGGGAGCTCTTCAACCCTCGGAAGCACAAGTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266304.9
ENST00000406644.7
ENST00000413942.1
CDS CAA 90 bp GGCTGGGGCTTCAGGTCCTCCTCAGCAAACTTGTGCTTCCGAGGGTaGAAGAGCTCCCCGCCTGGCACACTGGAGAGCACCAGGTCGGCG +
Preference number: 6 (lower is better)
Translates to: GWGFRSSSANLCFRG*KSSPPGTLESTRSA
Trigger: CGCCGACCTGGTGCTCTCCAGTGTGCCAGGCGGGGAGCTCTTCAACCCTCGGAAGCACAAGTTTGCTGAGGAGGACCTGAAGCCCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266304.9
ENST00000406644.7
ENST00000413942.1
CDS TCA 72 bp CTTGAGGACCTCAGGCATGTCCATGGCAGGGGCCACTaGGAACCAGTCGCAGCTCACACAGCCCAGCAGGAG +
Preference number: 6 (lower is better)
Translates to: LEDLRHVHGRGH*EPVAAHTAQQE
Trigger: CTCCTGCTGGGCTGTGTGAGCTGCGACTGGTTCTCAGTGGCCCCTGCCATGGACATGCCTGAGGTCCTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406644.7
CDS GCA 72 bp ACTTGGACACGATGGTCTTGCACTTGCCCACCTCCTTaGGTAGCTCGGCCACCTCCGTCCGCAGGGCTGTGT +
Preference number: 6 (lower is better)
Translates to: TWTRWSCTCPPP*VARPPPSAGLC
Trigger: ACACAGCCCTGCGGACGGAGGTGGCCGAGCTACGCAAGGAGGTGGGCAAGTGCAAGACCATCGTGTCCAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS GCA 72 bp GAGAACCAGTCGCAGCTCACACAGCCCAGCAGGAGGTaGTTGCTCCAGGGAGTTCAGAGGCAGCTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: ENQSQLTQPSRR*LLQGVQRQLER
Trigger: CCTCTCCAGCTGCCTCTGAACTCCCTGGAGCAAGCACCTCCTGCTGGGCTGTGTGAGCTGCGACTGGTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406644.7
CDS CAA 72 bp TACTTGGACACGATGGTCTTGCACTTGCCCACCTCCTaGCGTAGCTCGGCCACCTCCGTCCGCAGGGCTGTG +
Preference number: 6 (lower is better)
Translates to: YLDTMVLHLPTS*RSSATSVRRAV
Trigger: CACAGCCCTGCGGACGGAGGTGGCCGAGCTACGCAAGGAGGTGGGCAAGTGCAAGACCATCGTGTCCAAGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS TCA 72 bp TCAGGTCCTCCTCAGCAAACTTGTGCTTCCGAGGGTTaGAGAGCTCCCCGCCTGGCACACTGGAGAGCACCA +
Preference number: 6 (lower is better)
Translates to: SGPPQQTCASEG*RAPRLAHWRAP
Trigger: TGGTGCTCTCCAGTGTGCCAGGCGGGGAGCTCTTCAACCCTCGGAAGCACAAGTTTGCTGAGGAGGACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266304.9
ENST00000406644.7
ENST00000413942.1
CDS GCA 72 bp ATAGGCTGGGGCTTCAGGTCCTCCTCAGCAAACTTGTaGTTCCGAGGGTTGAAGAGCTCCCCGCCTGGCACA +
Preference number: 6 (lower is better)
Translates to: IGWGFRSSSANL*FRGLKSSPPGT
Trigger: TGTGCCAGGCGGGGAGCTCTTCAACCCTCGGAAGCACAAGTTTGCTGAGGAGGACCTGAAGCCCCAGCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266304.9
ENST00000406644.7
ENST00000413942.1
CDS CAA 72 bp GGCACACTGGAGAGCACCAGGTCGGCGGGGTCCGGATaGAAGTTCACATCCACTTCCACACAATTGGGGTCG +
Preference number: 6 (lower is better)
Translates to: GTLESTRSAGSG*KFTSTSTQLGS
Trigger: CGACCCCAATTGTGTGGAAGTGGATGTGAACTTCAATCCGGACCCCGCCGACCTGGTGCTCTCCAGTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266304.9
ENST00000406644.7
ENST00000413942.1
CDS CAA 72 bp TTCAGGTCCTCCTCAGCAAACTTGTGCTTCCGAGGGTaGAAGAGCTCCCCGCCTGGCACACTGGAGAGCACC +
Preference number: 6 (lower is better)
Translates to: FRSSSANLCFRG*KSSPPGTLEST
Trigger: GGTGCTCTCCAGTGTGCCAGGCGGGGAGCTCTTCAACCCTCGGAAGCACAAGTTTGCTGAGGAGGACCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266304.9
ENST00000406644.7
ENST00000413942.1
CDS CAA 72 bp ATCATAGGCTGGGGCTTCAGGTCCTCCTCAGCAAACTaGTGCTTCCGAGGGTTGAAGAGCTCCCCGCCTGGC +
Preference number: 6 (lower is better)
Translates to: IIGWGFRSSSAN*CFRGLKSSPPG
Trigger: GCCAGGCGGGGAGCTCTTCAACCCTCGGAAGCACAAGTTTGCTGAGGAGGACCTGAAGCCCCAGCCTATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS CCA 72 bp GCACGGGTTACAAGGGCCCGTATTTGGTCTCATACTTaGACACGATGGTCTTGCACTTGCCCACCTCCTTGC +
Preference number: 6 (lower is better)
Translates to: ARVTRARIWSHT*TRWSCTCPPPC
Trigger: GCAAGGAGGTGGGCAAGTGCAAGACCATCGTGTCCAAGTATGAGACCAAATACGGGCCCTTGTAACCCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS CAA 72 bp GGGTCCGGATTGAAGTTCACATCCACTTCCACACAATaGGGGTCGATGGGACTGGGAGTCTCCCTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: GSGLKFTSTSTQ*GSMGLGVSLSF
Trigger: GAAGGAGAGGGAGACTCCCAGTCCCATCGACCCCAATTGTGTGGAAGTGGATGTGAACTTCAATCCGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266304.9
ENST00000406644.7
ENST00000413942.1
CDS CAA 72 bp AGGCGCCGGGCATCCCGTGACCGTTTAGCTGCCACGTaGTTCTTCTTGCGTCTTGTCCAGTACTTTTCATCC +
Preference number: 6 (lower is better)
Translates to: RRRASRDRLAAT*FFLRLVQYFSS
Trigger: GGATGAAAAGTACTGGACAAGACGCAAGAAGAACAACGTGGCAGCTAAACGGTCACGGGATGCCCGGCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS CAA 72 bp GGCACGGGTTACAAGGGCCCGTATTTGGTCTCATACTaGGACACGATGGTCTTGCACTTGCCCACCTCCTTG +
Preference number: 6 (lower is better)
Translates to: GTGYKGPYLVSY*DTMVLHLPTSL
Trigger: CAAGGAGGTGGGCAAGTGCAAGACCATCGTGTCCAAGTATGAGACCAAATACGGGCCCTTGTAACCCGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266304.9
ENST00000406644.7
CDS CAA 72 bp TCCAGGTGGAAAGATTCGCCATCATATGGGATGGTCTaGTCCCAGATGGGTGGCATGAGGGAGGCTGAGACA +
Preference number: 6 (lower is better)
Translates to: SRWKDSPSYGMV*SQMGGMREAET
Trigger: TGTCTCAGCCTCCCTCATGCCACCCATCTGGGACAAGACCATCCCATATGATGGCGAATCTTTCCACCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266304.9
ENST00000406644.7
ENST00000413942.1