RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TECTB (Homo sapiens)

Ensembl gene IDs: ENSG00000119913

Ensembl transcript IDs: ENST00000369422.4, ENST00000643850.1, ENST00000645243.1, ENST00000646139.2

Found 460 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAGGAGCGGCAGCTaGCTGGCTAACTCCTATAACACGGCACAAATCCCCAACATCATG +
Preference number: 1 (lower is better)
Translates to: CLSFAEDYCGWRSGS*LANSYNTAQIPNIM
Trigger: CATGATGTTGGGGATTTGTGCCGTGTTATAGGAGTTAGCCAGGCAGCTGCCGCTCCTCCACCCACAATAGTCCTCAGCGAATGACAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR CCA 90 bp GCTAACTCCTATAACACGGCACAAATCCCCAACATCATGATGAGGTaGTGGAGAACATCTGTGGACCAGAAGGGGAGGGAGATGGCACTC +
Preference number: 1 (lower is better)
Translates to: ANSYNTAQIPNIMMR*WRTSVDQKGREMAL
Trigger: GAGTGCCATCTCCCTCCCCTTCTGGTCCACAGATGTTCTCCACCACCTCATCATGATGTTGGGGATTTGTGCCGTGTTATAGGAGTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR CCA 90 bp GTTGGAATCCAAGGGAAGCCATCTGGGGATGGCTTTACTAAGACTTaGGGAAGTGAGGTCCAGTTCTGCTTCATCCGATTTACCTTCGGT +
Preference number: 1 (lower is better)
Translates to: VGIQGKPSGDGFTKT*GSEVQFCFIRFTFG
Trigger: ACCGAAGGTAAATCGGATGAAGCAGAACTGGACCTCACTTCCCCAAGTCTTAGTAAAGCCATCCCCAGATGGCTTCCCTTGGATTCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR TCA 90 bp GTGGGGGCTCAGCTCTGGTCCTTAAGTAGAATGACACTGCCTCAATaGCAAAGCTCCTTTTTGGCAAAGTCAGCTATTAATGTGCGTTGT +
Preference number: 1 (lower is better)
Translates to: VGAQLWSLSRMTLPQ*QSSFLAKSAINVRC
Trigger: ACAACGCACATTAATAGCTGACTTTGCCAAAAAGGAGCTTTGTCATTGAGGCAGTGTCATTCTACTTAAGGACCAGAGCTGAGCCCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR GCA 90 bp ATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGTaGTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTG +
Preference number: 1 (lower is better)
Translates to: IWAYSGSLGWPVTKM*YCMLSLAAFAFVFL
Trigger: CAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR CCA 90 bp ATCTCCTCATGTAGTTGCTTCCTTCTTATCATTCAGGTGAGATCTTaGGTCTTAGCTGAAATGTTTCTTCCTCTAAGGGGCTTCCCTGGC +
Preference number: 1 (lower is better)
Translates to: ISSCSCFLLIIQVRS*VLAEMFLPLRGFPG
Trigger: GCCAGGGAAGCCCCTTAGAGGAAGAAACATTTCAGCTAAGACCCAAGATCTCACCTGAATGATAAGAAGGAAGCAACTACATGAGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR GCA 90 bp GCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGTGCTACTaGATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTTTG +
Preference number: 1 (lower is better)
Translates to: AYSGSLGWPVTKMCY*MLSLAAFAFVFLIL
Trigger: CAAAATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR CCA 90 bp TTTATCTGTAGGATTGGGTCACCAAACTCACAGCACTTGTGTCATTaGAGTCACTTTATAGTCATGTTTCCAGCAGCAGTTTCACTGGGG +
Preference number: 1 (lower is better)
Translates to: FICRIGSPNSQHLCH*SHFIVMFPAAVSLG
Trigger: CCCCAGTGAAACTGCTGCTGGAAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCCAATCCTACAGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR GCA 90 bp TTCACAGAAATTATTGGAGTGCATATTTGGCAAAGTGCTATTCTCTaGCCCCCAACAATGTGGTCTTCTGTTTGTTCTTTTTGGCAGCAC +
Preference number: 1 (lower is better)
Translates to: FTEIIGVHIWQSAIL*PPTMWSSVCSFWQH
Trigger: GTGCTGCCAAAAAGAACAAACAGAAGACCACATTGTTGGGGGGCAGAGAATAGCACTTTGCCAAATATGCACTCCAATAATTTCTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR CCA 90 bp TTTGTTGACAATGTAAATCATTTATATGGGCATATTCTGGATCACTaGGGTGGCCAGTTACCAAGATGTGCTACTGCATGCTTTCATTGG +
Preference number: 1 (lower is better)
Translates to: FVDNVNHLYGHILDH*GGQLPRCATACFHW
Trigger: CCAATGAAAGCATGCAGTAGCACATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACATTGTCAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR GCA 90 bp AGATTATTAATAAGTGAACTGTCTTACCCCATCTCCTCATGTAGTTaGTTCCTTCTTATCATTCAGGTGAGATCTTGGGTCTTAGCTGAA +
Preference number: 1 (lower is better)
Translates to: RLLISELSYPISSCS*FLLIIQVRSWVLAE
Trigger: TTCAGCTAAGACCCAAGATCTCACCTGAATGATAAGAAGGAAGCAACTACATGAGGAGATGGGGTAAGACAGTTCACTTATTAATAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR-3UTR CCA 90 bp GGCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCCACAAGACCAGTGAGGACTATTGTGGGTaGAGGAGCGGCAGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: GKGRGLVCLVHGSSHKTSEDYCG*RSGSCL
Trigger: CAGGCAGCTGCCGCTCCTCCACCCACAATAGTCCTC...ACTGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR-3UTR CCA 90 bp CATCTCCCATGTCATCAGTTGAAAGATTGGAACTCCCTGCGTGGGGGCTCAGCTGAGGACTATTGTGGGTaGAGGAGCGGCAGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: HLPCHQLKDWNSLRGGSAEDYCG*RSGSCL
Trigger: CAGGCAGCTGCCGCTCCTCCACCCACAATAGTCCTC...AGCTGAGCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGACATGGGAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR TCA 90 bp TGGGTCTTAGCTGAAATGTTTCTTCCTCTAAGGGGCTTCCCTGGCTGCTCTCTAGGTATGGAGGAGGGGTaGGGTCATTGCCCAAGGTCA +
Preference number: 2 (lower is better)
Translates to: WVLAEMFLPLRGFPGCSLGMEEG*GHCPRS
Trigger: TGACCTTGGGCAATGACCTCACCCCTCCTCCATACC...TAGAGAGCAGCCAGGGAAGCCCCTTAGAGGAAGAAACATTTCAGCTAAGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR-3UTR GCA 90 bp GCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCCACAAGACCAGTTCAAAGTGCTATTCTCTaGCCCCCAACAATGTGGTCT +
Preference number: 2 (lower is better)
Translates to: AREGALSVLFTAVATRPVQSAIL*PPTMWS
Trigger: AGACCACATTGTTGGGGGGCAGAGAATAGCACTTTG...AACTGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR-3UTR CCA 90 bp GGCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCCACAAGACCAGTATGCTCAGCAGTACTTaGTTGGGTCTGCTAACCTTT +
Preference number: 2 (lower is better)
Translates to: GKGRGLVCLVHGSSHKTSMLSST*LGLLTF
Trigger: AAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCAT...ACTGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR CAA 90 bp CCAAATACTCTACACATATTGGCAAGGGAAGGGGCCTTGTCTGTCTaGTTCACGGCAGTAGCCACAAGACCAGTTCCCAGTACAGTCATC +
Preference number: 2 (lower is better)
Translates to: PNTLHILAREGALSV*FTAVATRPVPSTVI
Trigger: GATGACTGTACTGGGAACTGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGCCAATATGTGTAGAGTATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR-3UTR CCA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGGAGGACTATTGTGGGTaGAGGAGCGGCAGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKEDYCG*RSGSCL
Trigger: CAGGCAGCTGCCGCTCCTCCACCCACAATAGTCCTC...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGTTGGAACTCCCTGCGTaGGGGCTCAGCTCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKLELPA*GLSSGP
Trigger: AGGACCAGAGCTGAGCCCCCACGCAGGGAGTTCCAA...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTTGGAACTCCCTGCGTaGGGGCTCAGCTCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: QDVLLHAFIGCICICVSDLELPA*GLSSGP
Trigger: AGGACCAGAGCTGAGCCCCCACGCAGGGAGTTCCAA...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCTCTAAGGGGCTTCCCTaGCTGCTCTCTAAATCACGT +
Preference number: 2 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSSKGLP*LLSKSR
Trigger: ACGTGATTTAGAGAGCAGCCAGGGAAGCCCCTTAGA...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR-3UTR TCA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCTCCCATGTCATCAGTTaGAAGATTGGAACTCCCTGC +
Preference number: 2 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSSHVIS*KIGTPC
Trigger: GCAGGGAGTTCCAATCTTTCAACTGATGACATGGGA...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR GCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATAAGATTGGAACTCCCTaGGTGGGGGCTCAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: QDVLLHAFIGCICICVSDKIGTP*VGAQLW
Trigger: CCAGAGCTGAGCCCCCACGCAGGGAGTTCCAATCTT...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR GCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGTGGAGGAGCGGCAGCTaGCTGGCTAACTCCTATAAC +
Preference number: 2 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMWRSGS*LANSYN
Trigger: GTTATAGGAGTTAGCCAGGCAGCTGCCGCTCCTCCA...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR-3UTR CCA 90 bp TCTCTTCAAAATGCTCAGCAGTACTTGGTTGGGTCTGCTAACCTTTTAAAGTTAGAGGACTATTGTGGGTaGAGGAGCGGCAGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: SLQNAQQYLVGSANLLKLEDYCG*RSGSCL
Trigger: CAGGCAGCTGCCGCTCCTCCACCCACAATAGTCCTC...TAACTTTAAAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATTTTGAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp TCTCTTCAAAATGCTCAGCAGTACTTGGTTGGGTCTGCTAACCTTTTAAAGTTATTGGAACTCCCTGCGTaGGGGCTCAGCTCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: SLQNAQQYLVGSANLLKLLELPA*GLSSGP
Trigger: AGGACCAGAGCTGAGCCCCCACGCAGGGAGTTCCAA...TAACTTTAAAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATTTTGAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCTATATGGGCATATTCTaGATCACTGGGGTGGCCAGT +
Preference number: 2 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSYMGIF*ITGVAS
Trigger: ACTGGCCACCCCAGTGATCCAGAATATGCCCATATA...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR TCA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGACTGCAGCCCTGACTTaGGTATGGAGAAAGGAGGCT +
Preference number: 2 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKTAALT*VWRKEA
Trigger: AGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGT...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR GCA 90 bp AAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTAAGATTGGAACTCCCTaGGTGGGGGCTCAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: KMCYCMLSLAAFAFVFLIKIGTP*VGAQLW
Trigger: CCAGAGCTGAGCCCCCACGCAGGGAGTTCCAATCTT...AATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGCATCAGTTGAAAGATTaGAACTCCCTGCGTGGGGGC +
Preference number: 2 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKHQLKD*NSLRGG
Trigger: GCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATG...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATGGTGGAGAACATCTGTaGACCAGAAGGGGAGGGAGA +
Preference number: 2 (lower is better)
Translates to: QDVLLHAFIGCICICVSDGGEHL*TRRGGR
Trigger: TCTCCCTCCCCTTCTGGTCCACAGATGTTCTCCACC...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR CAA 90 bp CCAATTTCACAGAGGAAACTAGGGTATGGAGGAGGGGTGAGGTCATaGCCCAAGGTCACTCAGTTAATAAAAGACAGAGCCATAACAAGA +
Preference number: 2 (lower is better)
Translates to: PISQRKLGYGGGVRS*PKVTQLIKDRAITR
Trigger: TCTTGTTATGGCTCTGTCTTTTATTAACTGAGTGACCTTGGGCAATGACCTCACCCCTCCTCCATACCCTAGTTTCCTCTGTGAAATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR-3UTR TCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGGTGTTTGTCATTCGCTaGGGACTATTGTGGGTGGAG +
Preference number: 2 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMVFVIR*GLLWVE
Trigger: CTCCACCCACAATAGTCCTCAGCGAATGACAAACAC...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR TCA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAGTGTTTGTCATTCGCTaGGGACTATTGTGGGTGGAG +
Preference number: 2 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGVFVIR*GLLWVE
Trigger: CTCCACCCACAATAGTCCTCAGCGAATGACAAACAC...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAGAGGAAACTAGGGTATaGAGGAGGGGTGAGGTCATT +
Preference number: 2 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGEETRV*RRGEVI
Trigger: AATGACCTCACCCCTCCTCCATACCCTAGTTTCCTC...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR-3UTR CCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGGAGGAAACTAGGGTATaGAGGAGGGGTGAGGTCATT +
Preference number: 2 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMEETRV*RRGEVI
Trigger: AATGACCTCACCCCTCCTCCATACCCTAGTTTCCTC...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR-3UTR TCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATGTGTTTGTCATTCGCTaGGGACTATTGTGGGTGGAG +
Preference number: 2 (lower is better)
Translates to: QDVLLHAFIGCICICVSDVFVIR*GLLWVE
Trigger: CTCCACCCACAATAGTCCTCAGCGAATGACAAACAC...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR TCA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTGTGTTTGTCATTCGCTaGGGACTATTGTGGGTGGAG +
Preference number: 2 (lower is better)
Translates to: SYQDVLLHAFIGCICICVVFVIR*GLLWVE
Trigger: CTCCACCCACAATAGTCCTCAGCGAATGACAAACAC...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR TCA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTTCCCATGTCATCAGTTaGAAGATTGGAACTCCCTGC +
Preference number: 2 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFSHVIS*KIGTPC
Trigger: GCAGGGAGTTCCAATCTTTCAACTGATGACATGGGA...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR GCA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGCAAAGTGCTATTCTCTaGCCCCCAACAATGTGGTCT +
Preference number: 2 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKQSAIL*PPTMWS
Trigger: AGACCACATTGTTGGGGGGCAGAGAATAGCACTTTG...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR GCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGCAAAGTGCTATTCTCTaGCCCCCAACAATGTGGTCT +
Preference number: 2 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMQSAIL*PPTMWS
Trigger: AGACCACATTGTTGGGGGGCAGAGAATAGCACTTTG...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp TTAGGTTTGAGCAAAACTATTGTATTCCACTCTGAATCCCACATCATCTCCCATCATCAGTTGAAAGATTaGAACTCCCTGCGTGGGGGC +
Preference number: 2 (lower is better)
Translates to: LGLSKTIVFHSESHIISHHQLKD*NSLRGG
Trigger: GCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATG...ATGGGAGATGATGTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp TCTCTTCAAAATGCTCAGCAGTACTTGGTTGGGTCTGCTAACCTTTTAAAGTTACATCAGTTGAAAGATTaGAACTCCCTGCGTGGGGGC +
Preference number: 2 (lower is better)
Translates to: SLQNAQQYLVGSANLLKLHQLKD*NSLRGG
Trigger: GCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATG...TAACTTTAAAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATTTTGAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGCAGCAGCAGTTTCACTaGGGCAATGCCGTGTTATTA +
Preference number: 2 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKQQQFH*GNAVLL
Trigger: TAATAACACGGCATTGCCCCAGTGAAACTGCTGCTG...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTCAGCAGCAGTTTCACTaGGGCAATGCCGTGTTATTA +
Preference number: 2 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFQQQFH*GNAVLL
Trigger: TAATAACACGGCATTGCCCCAGTGAAACTGCTGCTG...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCACTGCATGCTTTCATTaGCTGCATTTGCATTTGTGT +
Preference number: 2 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSTACFH*LHLHLC
Trigger: ACACAAATGCAAATGCAGCCAATGAAAGCATGCAGT...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp TTACAGAAAGAAGAGATCCTAAACTCGTTGGAACTCCAGCTTAGAGACCAAGTCTATATGGGCATATTCTaGATCACTGGGGTGGCCAGT +
Preference number: 2 (lower is better)
Translates to: LQKEEILNSLELQLRDQVYMGIF*ITGVAS
Trigger: ACTGGCCACCCCAGTGATCCAGAATATGCCCATATA...GACTTGGTCTCTAAGCTGGAGTTCCAACGAGTTTAGGATCTCTTCTTTCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTGGCTTTACTAAGACTTaGGGAAGTGAGGTCCAGTTC +
Preference number: 2 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFGFTKT*GSEVQF
Trigger: GAACTGGACCTCACTTCCCCAAGTCTTAGTAAAGCC...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR CAA 90 bp TTTAAAGTTAAAATAGCTTTCAAAGGAATTTACTGCAGCCCTGACTaGAGTATGGAGAAAGGAGGCTCCTCCCCCAGCTGTAGAAGGACT +
Preference number: 2 (lower is better)
Translates to: FKVKIAFKGIYCSPD*SMEKGGSSPSCRRT
Trigger: AGTCCTTCTACAGCTGGGGGAGGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGCTATTTTAACTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR CAA 90 bp CACAAGGCATTTATCTGTAGGATTGGGTCACCAAACTCACAGCACTaGTGTCATTGGAGTCACTTTATAGTCATGTTTCCAGCAGCAGTT +
Preference number: 2 (lower is better)
Translates to: HKAFICRIGSPNSQH*CHWSHFIVMFPAAV
Trigger: AACTGCTGCTGGAAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCCAATCCTACAGATAAATGCCTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR TCA 90 bp TTACAGAAAGAAGAGATCCTAAACTCGTTGGAACTCCAGCTTAGAGACCAAGTCAATTTACTGCAGCCCTaGCTTGAGTATGGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: LQKEEILNSLELQLRDQVNLLQP*LEYGER
Trigger: CCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATT...GACTTGGTCTCTAAGCTGGAGTTCCAACGAGTTTAGGATCTCTTCTTTCTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR TCA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAATGACACTGCCTCAATaGCAAAGCTCCTTTTTGGCA +
Preference number: 2 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGMTLPQ*QSSFLA
Trigger: TGCCAAAAAGGAGCTTTGTCATTGAGGCAGTGTCAT...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR TCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGATGACACTGCCTCAATaGCAAAGCTCCTTTTTGGCA +
Preference number: 2 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMMTLPQ*QSSFLA
Trigger: TGCCAAAAAGGAGCTTTGTCATTGAGGCAGTGTCAT...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR GCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATCAAAGTGCTATTCTCTaGCCCCCAACAATGTGGTCT +
Preference number: 2 (lower is better)
Translates to: QDVLLHAFIGCICICVSDQSAIL*PPTMWS
Trigger: AGACCACATTGTTGGGGGGCAGAGAATAGCACTTTG...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR GCA 90 bp TTACAGAAAGAAGAGATCCTAAACTCGTTGGAACTCCAGCTTAGAGACCAAGTCAGTGAGGTCCAGTTCTaGTTCATCCGATTTACCTTC +
Preference number: 2 (lower is better)
Translates to: LQKEEILNSLELQLRDQVSEVQF*FIRFTF
Trigger: GAAGGTAAATCGGATGAAGCAGAACTGGACCTCACT...GACTTGGTCTCTAAGCTGGAGTTCCAACGAGTTTAGGATCTCTTCTTTCTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645243.1
3UTR-3UTR CCA 90 bp TTACAGAAAGAAGAGATCCTAAACTCGTTGGAACTCCAGCTTAGAGACCAAGTCATGCTCAGCAGTACTTaGTTGGGTCTGCTAACCTTT +
Preference number: 2 (lower is better)
Translates to: LQKEEILNSLELQLRDQVMLSST*LGLLTF
Trigger: AAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCAT...GACTTGGTCTCTAAGCTGGAGTTCCAACGAGTTTAGGATCTCTTCTTTCTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCGACAAAGCTCCTTTTTaGCAAAGTCAGCTATTAATG +
Preference number: 2 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSDKAPF*QSQLLM
Trigger: CATTAATAGCTGACTTTGCCAAAAAGGAGCTTTGTC...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp TCTCTTCAAAATGCTCAGCAGTACTTGGTTGGGTCTGCTAACCTTTTAAAGTTAGTGGGGGCTCAGCTCTaGTCCTTAAGTAGAATGACA +
Preference number: 2 (lower is better)
Translates to: SLQNAQQYLVGSANLLKLVGAQL*SLSRMT
Trigger: TGTCATTCTACTTAAGGACCAGAGCTGAGCCCCCAC...TAACTTTAAAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATTTTGAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp TTAGGTTTGAGCAAAACTATTGTATTCCACTCTGAATCCCACATCATCTCCCATGTGGGGGCTCAGCTCTaGTCCTTAAGTAGAATGACA +
Preference number: 2 (lower is better)
Translates to: LGLSKTIVFHSESHIISHVGAQL*SLSRMT
Trigger: TGTCATTCTACTTAAGGACCAGAGCTGAGCCCCCAC...ATGGGAGATGATGTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTATCAGTGATGGTGCATaGTACTCTAGGGCTTTCAGT +
Preference number: 2 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFISDGA*YSRAFS
Trigger: ACTGAAAGCCCTAGAGTACCATGCACCATCACTGAT...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR-3UTR TCA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTAATTTACTGCAGCCCTaGCTTGAGTATGGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: SYQDVLLHAFIGCICICVNLLQP*LEYGER
Trigger: CCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATT...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp TCTCTTCAAAATGCTCAGCAGTACTTGGTTGGGTCTGCTAACCTTTTAAAGTTATATATGGGCATATTCTaGATCACTGGGGTGGCCAGT +
Preference number: 2 (lower is better)
Translates to: SLQNAQQYLVGSANLLKLYMGIF*ITGVAS
Trigger: ACTGGCCACCCCAGTGATCCAGAATATGCCCATATA...TAACTTTAAAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATTTTGAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp TTAGGTTTGAGCAAAACTATTGTATTCCACTCTGAATCCCACATCATCTCCCATGGCTTTACTAAGACTTaGGGAAGTGAGGTCCAGTTC +
Preference number: 2 (lower is better)
Translates to: LGLSKTIVFHSESHIISHGFTKT*GSEVQF
Trigger: GAACTGGACCTCACTTCCCCAAGTCTTAGTAAAGCC...ATGGGAGATGATGTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR-3UTR TCA 90 bp TCTCTTCAAAATGCTCAGCAGTACTTGGTTGGGTCTGCTAACCTTTTAAAGTTAAATTTACTGCAGCCCTaGCTTGAGTATGGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: SLQNAQQYLVGSANLLKLNLLQP*LEYGER
Trigger: CCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATT...TAACTTTAAAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATTTTGAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR TCA 90 bp CCTTTTTGGCAAAGTCAGCTATTAATGTGCGTTGTGCATTTAGTGTTGACTTTGAATTTACTGCAGCCCTaGCTTGAGTATGGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: PFWQSQLLMCVVHLVLTLNLLQP*LEYGER
Trigger: CCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATT...CAAAGTCAACACTAAATGCACAACGCACATTAATAGCTGACTTTGCCAAAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR TCA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTATTGTATTCCACTCTaGATCCCACATCATCTCCCA +
Preference number: 2 (lower is better)
Translates to: SYQDVLLHAFIGCICICVYCIPL*IPHHLP
Trigger: TGGGAGATGATGTGGGATTCAGAGTGGAATACAATA...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR TCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTATTGTATTCCACTCTaGATCCCACATCATCTCCCA +
Preference number: 2 (lower is better)
Translates to: QDVLLHAFIGCICICVSDYCIPL*IPHHLP
Trigger: TGGGAGATGATGTGGGATTCAGAGTGGAATACAATA...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR TCA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGATCAGTACAAAGAACCTaGCAGATAAACCTAGGTTGT +
Preference number: 2 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGSVQRT*QINLGC
Trigger: ACAACCTAGGTTTATCTGTCAGGTTCTTTGTACTGA...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR-3UTR GCA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGATTCAAAGGAATTTACTaGAGCCCTGACTTGAGTATG +
Preference number: 2 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGFKGIY*SPDLSM
Trigger: CATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAA...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR GCA 90 bp TTAGGTTTGAGCAAAACTATTGTATTCCACTCTGAATCCCACATCATCTCCCATAGTGAGGTCCAGTTCTaGTTCATCCGATTTACCTTC +
Preference number: 2 (lower is better)
Translates to: LGLSKTIVFHSESHIISHSEVQF*FIRFTF
Trigger: GAAGGTAAATCGGATGAAGCAGAACTGGACCTCACT...ATGGGAGATGATGTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR-3UTR CCA 90 bp TTACAGAAAGAAGAGATCCTAAACTCGTTGGAACTCCAGCTTAGAGACCAAGTCACTGCATGCTTTCATTaGCTGCATTTGCATTTGTGT +
Preference number: 2 (lower is better)
Translates to: LQKEEILNSLELQLRDQVTACFH*LHLHLC
Trigger: ACACAAATGCAAATGCAGCCAATGAAAGCATGCAGT...GACTTGGTCTCTAAGCTGGAGTTCCAACGAGTTTAGGATCTCTTCTTTCTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGACTGCATGCTTTCATTaGCTGCATTTGCATTTGTGT +
Preference number: 2 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMTACFH*LHLHLC
Trigger: ACACAAATGCAAATGCAGCCAATGAAAGCATGCAGT...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR TCA 90 bp AAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTTATTGTATTCCACTCTaGATCCCACATCATCTCCCA +
Preference number: 2 (lower is better)
Translates to: KMCYCMLSLAAFAFVFLIYCIPL*IPHHLP
Trigger: TGGGAGATGATGTGGGATTCAGAGTGGAATACAATA...AATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR GCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGAGTCAGCTATTAATGTaGGTTGTGCATTTAGTGTTG +
Preference number: 2 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMSQLLM*VVHLVL
Trigger: CAACACTAAATGCACAACGCACATTAATAGCTGACT...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR GCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGCATGCTTTCATTGGCTaGATTTGCATTTGTGTTTCT +
Preference number: 2 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMHAFIG*ICICVS
Trigger: AGAAACACAAATGCAAATGCAGCCAATGAAAGCATG...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTATTGGAGTGCATATTTaGCAAAGTGCTATTCTCTGC +
Preference number: 2 (lower is better)
Translates to: SYQDVLLHAFIGCICICVIGVHI*QSAILC
Trigger: GCAGAGAATAGCACTTTGCCAAATATGCACTCCAAT...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAGACAAAGCTCCTTTTTaGCAAAGTCAGCTATTAATG +
Preference number: 2 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGDKAPF*QSQLLM
Trigger: CATTAATAGCTGACTTTGCCAAAAAGGAGCTTTGTC...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTACTGCATGCTTTCATTaGCTGCATTTGCATTTGTGT +
Preference number: 2 (lower is better)
Translates to: SYQDVLLHAFIGCICICVTACFH*LHLHLC
Trigger: ACACAAATGCAAATGCAGCCAATGAAAGCATGCAGT...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATGACAAAGCTCCTTTTTaGCAAAGTCAGCTATTAATG +
Preference number: 2 (lower is better)
Translates to: QDVLLHAFIGCICICVSDDKAPF*QSQLLM
Trigger: CATTAATAGCTGACTTTGCCAAAAAGGAGCTTTGTC...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR GCA 90 bp TCGATTTTGTTCATCCCTTGGGGATTCTGTAGCTCACATTTATCAGTACAAAGAAGTCAGCTATTAATGTaGGTTGTGCATTTAGTGTTG +
Preference number: 2 (lower is better)
Translates to: SILFIPWGFCSSHLSVQRSQLLM*VVHLVL
Trigger: CAACACTAAATGCACAACGCACATTAATAGCTGACT...TCTTTGTACTGATAAATGTGAGCTACAGAATCCCCAAGGGATGAACAAAATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR-3UTR GCA 90 bp TCGATTTTGTTCATCCCTTGGGGATTCTGTAGCTCACATTTATCAGTACAAAGAATCTCCTCATGTAGTTaGTTCCTTCTTATCATTCAG +
Preference number: 2 (lower is better)
Translates to: SILFIPWGFCSSHLSVQRISSCS*FLLIIQ
Trigger: CTGAATGATAAGAAGGAAGCAACTACATGAGGAGAT...TCTTTGTACTGATAAATGTGAGCTACAGAATCCCCAAGGGATGAACAAAATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR-3UTR GCA 90 bp CCTTTTTGGCAAAGTCAGCTATTAATGTGCGTTGTGCATTTAGTGTTGACTTTGATCTCCTCATGTAGTTaGTTCCTTCTTATCATTCAG +
Preference number: 2 (lower is better)
Translates to: PFWQSQLLMCVVHLVLTLISSCS*FLLIIQ
Trigger: CTGAATGATAAGAAGGAAGCAACTACATGAGGAGAT...CAAAGTCAACACTAAATGCACAACGCACATTAATAGCTGACTTTGCCAAAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR GCA 72 bp TTCGCTGAGGACTATTGTGGGTGGAGGAGCGGCAGCTaGCTGGCTAACTCCTATAACACGGCACAAATCCCC +
Preference number: 3 (lower is better)
Translates to: FAEDYCGWRSGS*LANSYNTAQIP
Trigger: GGGGATTTGTGCCGTGTTATAGGAGTTAGCCAGGCAGCTGCCGCTCCTCCACCCACAATAGTCCTCAGCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR-3UTR CAA 90 bp CATCTCCCATGTCATCAGTTGAAAGATTGGAACTCCCTGCGTGGGGGCTCAGCTTACTGCAGCCCTGACTaGAGTATGGAGAAAGGAGGC +
Preference number: 3 (lower is better)
Translates to: HLPCHQLKDWNSLRGGSAYCSPD*SMEKGG
Trigger: GCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTA...AGCTGAGCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGACATGGGAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CAA 90 bp TCTACACATATTGGCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCACCCTGACTGGGTGTTaGCTGTTTGCTGGGCATTGT +
Preference number: 3 (lower is better)
Translates to: STHIGKGRGLVCLVHGSSTLTGC*LFAGHC
Trigger: ACAATGCCCAGCAAACAGCAAACACCCAGTCAGGGT...GCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGCCAATATGTGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR CCA 72 bp CCCAGTACAGTCATCATAATCATGGCTGACCCTGACTaGGTGTTTGCTGTTTGCTGGGCATTGTTCAGTGCC +
Preference number: 3 (lower is better)
Translates to: PSTVIIIMADPD*VFAVCWALFSA
Trigger: GGCACTGAACAATGCCCAGCAAACAGCAAACACCCAGTCAGGGTCAGCCATGATTATGATGACTGTACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR TCA 72 bp CTTTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTaGGGACTATTGTGGGTGGAGGAGCGGCAGCTGCCT +
Preference number: 3 (lower is better)
Translates to: LFGSTINVFVIR*GLLWVEERQLP
Trigger: AGGCAGCTGCCGCTCCTCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CAA 90 bp GCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCCACAAGACCAGTTTATTGGAGTGCATATTaGGCAAAGTGCTATTCTCTG +
Preference number: 3 (lower is better)
Translates to: AREGALSVLFTAVATRPVYWSAY*AKCYSL
Trigger: CAGAGAATAGCACTTTGCCAAATATGCACTCCAATA...AACTGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR-3UTR CAA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGTCATCAGTTGAAAGATaGGAACTCCCTGCGTGGGGG +
Preference number: 3 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKSSVER*ELPAWG
Trigger: CCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGA...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CAA 90 bp TTACAGAAAGAAGAGATCCTAAACTCGTTGGAACTCCAGCTTAGAGACCAAGTCACCCTGACTGGGTGTTaGCTGTTTGCTGGGCATTGT +
Preference number: 3 (lower is better)
Translates to: LQKEEILNSLELQLRDQVTLTGC*LFAGHC
Trigger: ACAATGCCCAGCAAACAGCAAACACCCAGTCAGGGT...GACTTGGTCTCTAAGCTGGAGTTCCAACGAGTTTAGGATCTCTTCTTTCTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645243.1
3UTR-3UTR CAA 90 bp TCTCTTCAAAATGCTCAGCAGTACTTGGTTGGGTCTGCTAACCTTTTAAAGTTAGCAAGGGAAGGGGCCTaGTCTGTCTTGTTCACGGCA +
Preference number: 3 (lower is better)
Translates to: SLQNAQQYLVGSANLLKLAREGA*SVLFTA
Trigger: TGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGC...TAACTTTAAAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATTTTGAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR GCA 72 bp GGATCACTGGGGTGGCCAGTTACCAAGATGTGCTACTaGATGCTTTCATTGGCTGCATTTGCATTTGTGTTT +
Preference number: 3 (lower is better)
Translates to: GSLGWPVTKMCY*MLSLAAFAFVF
Trigger: AAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACTGGCCACCCCAGTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CAA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTACTGCAGCCCTGACTaGAGTATGGAGAAAGGAGGC +
Preference number: 3 (lower is better)
Translates to: SYQDVLLHAFIGCICICVYCSPD*SMEKGG
Trigger: GCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTA...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CAA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTCATCAGTTGAAAGATaGGAACTCCCTGCGTGGGGG +
Preference number: 3 (lower is better)
Translates to: QDVLLHAFIGCICICVSDSSVER*ELPAWG
Trigger: CCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGA...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CAA 90 bp AAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTTACTGCAGCCCTGACTaGAGTATGGAGAAAGGAGGC +
Preference number: 3 (lower is better)
Translates to: KMCYCMLSLAAFAFVFLIYCSPD*SMEKGG
Trigger: GCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTA...AATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CAA 90 bp TCTCTTCAAAATGCTCAGCAGTACTTGGTTGGGTCTGCTAACCTTTTAAAGTTATACTGCAGCCCTGACTaGAGTATGGAGAAAGGAGGC +
Preference number: 3 (lower is better)
Translates to: SLQNAQQYLVGSANLLKLYCSPD*SMEKGG
Trigger: GCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTA...TAACTTTAAAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATTTTGAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CAA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAAATGCTCAGCAGTACTaGGTTGGGTCTGCTAACCTT +
Preference number: 3 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGNAQQY*VGSANL
Trigger: AAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATT...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CAA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAAATACTCTACACATATaGGCAAGGGAAGGGGCCTTG +
Preference number: 3 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGNTLHI*AREGAL
Trigger: CAAGGCCCCTTCCCTTGCCAATATGTGTAGAGTATT...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR CCA 72 bp AGGATTGGGTCACCAAACTCACAGCACTTGTGTCATTaGAGTCACTTTATAGTCATGTTTCCAGCAGCAGTT +
Preference number: 3 (lower is better)
Translates to: RIGSPNSQHLCH*SHFIVMFPAAV
Trigger: AACTGCTGCTGGAAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCCAATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CAA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATCTCCCATGTCATCAGTaGAAAGATTGGAACTCCCTG +
Preference number: 3 (lower is better)
Translates to: QDVLLHAFIGCICICVSDLPCHQ*KDWNSL
Trigger: CAGGGAGTTCCAATCTTTCAACTGATGACATGGGAG...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CAA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTCTCCCATGTCATCAGTaGAAAGATTGGAACTCCCTG +
Preference number: 3 (lower is better)
Translates to: SYQDVLLHAFIGCICICVLPCHQ*KDWNSL
Trigger: CAGGGAGTTCCAATCTTTCAACTGATGACATGGGAG...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CAA 90 bp TTACAGAAAGAAGAGATCCTAAACTCGTTGGAACTCCAGCTTAGAGACCAAGTCCCAAACTCACAGCACTaGTGTCATTGGAGTCACTTT +
Preference number: 3 (lower is better)
Translates to: LQKEEILNSLELQLRDQVPNSQH*CHWSHF
Trigger: AAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGG...GACTTGGTCTCTAAGCTGGAGTTCCAACGAGTTTAGGATCTCTTCTTTCTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CAA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGCCAAACTCACAGCACTaGTGTCATTGGAGTCACTTT +
Preference number: 3 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKPNSQH*CHWSHF
Trigger: AAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGG...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR CCA 72 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTaGCCAGTTACCAAGATGTGCTACTGCATGCTTTCA +
Preference number: 3 (lower is better)
Translates to: KSFIWAYSGSLG*PVTKMCYCMLS
Trigger: TGAAAGCATGCAGTAGCACATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR CCA 72 bp AATGTAAATCATTTATATGGGCATATTCTGGATCACTaGGGTGGCCAGTTACCAAGATGTGCTACTGCATGC +
Preference number: 3 (lower is better)
Translates to: NVNHLYGHILDH*GGQLPRCATAC
Trigger: GCATGCAGTAGCACATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CAA 90 bp CCTTTTTGGCAAAGTCAGCTATTAATGTGCGTTGTGCATTTAGTGTTGACTTTGCTCCCATGTCATCAGTaGAAAGATTGGAACTCCCTG +
Preference number: 3 (lower is better)
Translates to: PFWQSQLLMCVVHLVLTLLPCHQ*KDWNSL
Trigger: CAGGGAGTTCCAATCTTTCAACTGATGACATGGGAG...CAAAGTCAACACTAAATGCACAACGCACATTAATAGCTGACTTTGCCAAAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CAA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGAATGTGGTCTTCTGTTaGTTCTTTTTGGCAGCACAA +
Preference number: 3 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKNVVFC*FFLAAQ
Trigger: TTGTGCTGCCAAAAAGAACAAACAGAAGACCACATT...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CAA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTACTGCATGCTTTCATaGGCTGCATTTGCATTTGTG +
Preference number: 3 (lower is better)
Translates to: SYQDVLLHAFIGCICICVYCMLS*AAFAFV
Trigger: CACAAATGCAAATGCAGCCAATGAAAGCATGCAGTA...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CAA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTCTGACAGCAAAGGATTaGAACATGGCTATGAGTATG +
Preference number: 3 (lower is better)
Translates to: SYQDVLLHAFIGCICICVLTAKD*NMAMSM
Trigger: CATACTCATAGCCATGTTCAAATCCTTTGCTGTCAG...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CAA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTAATGTGGTCTTCTGTTaGTTCTTTTTGGCAGCACAA +
Preference number: 3 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTNVVFC*FFLAAQ
Trigger: TTGTGCTGCCAAAAAGAACAAACAGAAGACCACATT...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CAA 90 bp TCTCTTCAAAATGCTCAGCAGTACTTGGTTGGGTCTGCTAACCTTTTAAAGTTATACTGCATGCTTTCATaGGCTGCATTTGCATTTGTG +
Preference number: 3 (lower is better)
Translates to: SLQNAQQYLVGSANLLKLYCMLS*AAFAFV
Trigger: CACAAATGCAAATGCAGCCAATGAAAGCATGCAGTA...TAACTTTAAAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATTTTGAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR TCA 72 bp GGATTCTGTAGCTCACATTTATCAGTACAAAGAACCTaGCAGATAAACCTAGGTTGTGGACCTCTGACAAAT +
Preference number: 3 (lower is better)
Translates to: GFCSSHLSVQRT*QINLGCGPLTN
Trigger: ATTTGTCAGAGGTCCACAACCTAGGTTTATCTGTCAGGTTCTTTGTACTGATAAATGTGAGCTACAGAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR GCA 72 bp ATTATTGGAGTGCATATTTGGCAAAGTGCTATTCTCTaGCCCCCAACAATGTGGTCTTCTGTTTGTTCTTTT +
Preference number: 3 (lower is better)
Translates to: IIGVHIWQSAIL*PPTMWSSVCSF
Trigger: AAAAGAACAAACAGAAGACCACATTGTTGGGGGGCAGAGAATAGCACTTTGCCAAATATGCACTCCAATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CAA 90 bp CCTTTTTGGCAAAGTCAGCTATTAATGTGCGTTGTGCATTTAGTGTTGACTTTGAATGTGGTCTTCTGTTaGTTCTTTTTGGCAGCACAA +
Preference number: 3 (lower is better)
Translates to: PFWQSQLLMCVVHLVLTLNVVFC*FFLAAQ
Trigger: TTGTGCTGCCAAAAAGAACAAACAGAAGACCACATT...CAAAGTCAACACTAAATGCACAACGCACATTAATAGCTGACTTTGCCAAAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR-3UTR CAA 90 bp CCTTTTTGGCAAAGTCAGCTATTAATGTGCGTTGTGCATTTAGTGTTGACTTTGTATTGGAGTGCATATTaGGCAAAGTGCTATTCTCTG +
Preference number: 3 (lower is better)
Translates to: PFWQSQLLMCVVHLVLTLYWSAY*AKCYSL
Trigger: CAGAGAATAGCACTTTGCCAAATATGCACTCCAATA...CAAAGTCAACACTAAATGCACAACGCACATTAATAGCTGACTTTGCCAAAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp GGGAGGGAGATGGCACTCAGAGACAGTTCTACAAGGGTAAAGCCAACTCAACAGAGGACTCCCCCGGTCTaGTCTCGCAGGAGGCGCTTC +
Preference number: 4 (lower is better)
Translates to: GREMALRDSSTRVKPTQQRTPPV*SRRRRF
Trigger: GAAGCGCCTCCTGCGAGACCAGACCGGGGGAGTCCT...CTGTTGAGTTGGCTTTACCCTTGTAGAACTGTCTCTGAGTGCCATCTCCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR TCA 90 bp GCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCCACAAGACCAGTTACTGCAAGGGATACATaGAGTCAGCCGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: AREGALSVLFTAVATRPVTARDT*SQPRGW
Trigger: CCACCCCCTCGGCTGACTTCATGTATCCCTTGCAGT...AACTGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR TCA 90 bp TCTGGGGATGGCTTTACTAAGACTTGGGGAAGTGAGGTCCAGTTCTGCTTCATCCAGAGGGAGACCTCTTaGTCTCGCCCCCTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: SGDGFTKTWGSEVQFCFIQRETS*SRPLCA
Trigger: GGCGCAGAGGGGGCGAGATCAAGAGGTCTCCCTCTG...GATGAAGCAGAACTGGACCTCACTTCCCCAAGTCTTAGTAAAGCCATCCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp CATCTCCCATGTCATCAGTTGAAAGATTGGAACTCCCTGCGTGGGGGCTCAGCTTTGGAACTCCCTGCGTaGGGGCTCAGCTCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: HLPCHQLKDWNSLRGGSALELPA*GLSSGP
Trigger: AGGACCAGAGCTGAGCCCCCACGCAGGGAGTTCCAA...AGCTGAGCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGACATGGGAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp CATCTCCCATGTCATCAGTTGAAAGATTGGAACTCCCTGCGTGGGGGCTCAGCTAAGATTGGAACTCCCTaGGTGGGGGCTCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: HLPCHQLKDWNSLRGGSAKIGTP*VGAQLW
Trigger: CCAGAGCTGAGCCCCCACGCAGGGAGTTCCAATCTT...AGCTGAGCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGACATGGGAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp GCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCCACAAGACCAGTTTCAGAGTTCAGGGGCTaGTCAGAGGGAGACCTCTTG +
Preference number: 4 (lower is better)
Translates to: AREGALSVLFTAVATRPVSEFRG*SEGDLL
Trigger: CAAGAGGTCTCCCTCTGACCAGCCCCTGAACTCTGA...AACTGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR GCA 90 bp GGCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCCACAAGACCAGTCCCTTGTTGATCAGCTaGCACTGCAAGGGATACATG +
Preference number: 4 (lower is better)
Translates to: GKGRGLVCLVHGSSHKTSPLLIS*HCKGYM
Trigger: CATGTATCCCTTGCAGTGGCAGCTGATCAACAAGGG...ACTGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp CATCTCCCATGTCATCAGTTGAAAGATTGGAACTCCCTGCGTGGGGGCTCAGCTACAGTGGCCACTCTCTaGTCAAAGGCAGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: HLPCHQLKDWNSLRGGSATVATL*SKAAWF
Trigger: GAACCAGGCTGCCTTTGACCAGAGAGTGGCCACTGT...AGCTGAGCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGACATGGGAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TGGGTCTTAGCTGAAATGTTTCTTCCTCTAAGGGGCTTCCCTGGCTGCTCTCTAGAGGACTATTGTGGGTaGAGGAGCGGCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: WVLAEMFLPLRGFPGCSLEDYCG*RSGSCL
Trigger: CAGGCAGCTGCCGCTCCTCCACCCACAATAGTCCTC...TAGAGAGCAGCCAGGGAAGCCCCTTAGAGGAAGAAACATTTCAGCTAAGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp GGCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCCACAAGACCAGTGAGGAAACTAGGGTATaGAGGAGGGGTGAGGTCATT +
Preference number: 4 (lower is better)
Translates to: GKGRGLVCLVHGSSHKTSEETRV*RRGEVI
Trigger: AATGACCTCACCCCTCCTCCATACCCTAGTTTCCTC...ACTGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR TCA 90 bp GCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCCACAAGACCAGTTTCCTGCAAACAGATCTaGACCGATTTCGGATGCCTC +
Preference number: 4 (lower is better)
Translates to: AREGALSVLFTAVATRPVSCKQI*TDFGCL
Trigger: GAGGCATCCGAAATCGGTTCAGATCTGTTTGCAGGA...AACTGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR TCA 90 bp TCTGGGGATGGCTTTACTAAGACTTGGGGAAGTGAGGTCCAGTTCTGCTTCATCACTGCAAGGGATACATaGAGTCAGCCGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SGDGFTKTWGSEVQFCFITARDT*SQPRGW
Trigger: CCACCCCCTCGGCTGACTTCATGTATCCCTTGCAGT...GATGAAGCAGAACTGGACCTCACTTCCCCAAGTCTTAGTAAAGCCATCCCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp TCTGGGGATGGCTTTACTAAGACTTGGGGAAGTGAGGTCCAGTTCTGCTTCATCGGAGCGGCAGCTGCCTaGCTAACTCCTATAACACGG +
Preference number: 4 (lower is better)
Translates to: SGDGFTKTWGSEVQFCFIGAAAA*LTPITR
Trigger: CCGTGTTATAGGAGTTAGCCAGGCAGCTGCCGCTCC...GATGAAGCAGAACTGGACCTCACTTCCCCAAGTCTTAGTAAAGCCATCCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR CAA 72 bp CTACACATATTGGCAAGGGAAGGGGCCTTGTCTGTCTaGTTCACGGCAGTAGCCACAAGACCAGTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LHILAREGALSV*FTAVATRPVPS
Trigger: ACTGGGAACTGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGCCAATATGTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR TCA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCCTCCCGTTCTTCACGTaGACAGTGGCCACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSLPFFT*TVATLW
Trigger: CCAGAGAGTGGCCACTGTTCACGTGAAGAACGGGAG...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp CATCTCCCATGTCATCAGTTGAAAGATTGGAACTCCCTGCGTGGGGGCTCAGCTTCCTGCAAACAGATCTaGACCGATTTCGGATGCCTC +
Preference number: 4 (lower is better)
Translates to: HLPCHQLKDWNSLRGGSASCKQI*TDFGCL
Trigger: GAGGCATCCGAAATCGGTTCAGATCTGTTTGCAGGA...AGCTGAGCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGACATGGGAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGCAGAGGGAGACCTCTTaGTCTCGCCCCCTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMQRETS*SRPLCA
Trigger: GGCGCAGAGGGGGCGAGATCAAGAGGTCTCCCTCTG...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR GCA 90 bp ATGTTTCTTCCTCTAAGGGGCTTCCCTGGCTGCTCTCTAAATCACGTCCCCCATACTGTAGAGGCTGGCTaGTGGATGCTCCCCAAATCT +
Preference number: 4 (lower is better)
Translates to: MFLPLRGFPGCSLNHVPHTVEAG*WMLPKS
Trigger: AGATTTGGGGAGCATCCAGCAGCCAGCCTCTACAGT...ATGGGGGACGTGATTTAGAGAGCAGCCAGGGAAGCCCCTTAGAGGAAGAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643850.1
CDS-3UTR GCA 90 bp GGCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCCACAAGACCAGTAGTGAGGTCCAGTTCTaGTTCATCCGATTTACCTTC +
Preference number: 4 (lower is better)
Translates to: GKGRGLVCLVHGSSHKTSSEVQF*FIRFTF
Trigger: GAAGGTAAATCGGATGAAGCAGAACTGGACCTCACT...ACTGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp TTACAGAAAGAAGAGATCCTAAACTCGTTGGAACTCCAGCTTAGAGACCAAGTCAGGACTCCCCCGGTCTaGTCTCGCAGGAGGCGCTTC +
Preference number: 4 (lower is better)
Translates to: LQKEEILNSLELQLRDQVRTPPV*SRRRRF
Trigger: GAAGCGCCTCCTGCGAGACCAGACCGGGGGAGTCCT...GACTTGGTCTCTAAGCTGGAGTTCCAACGAGTTTAGGATCTCTTCTTTCTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp AATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAGGAGCGGCAGCTGGAGCGGCAGCTGCCTaGCTAACTCCTATAACACGG +
Preference number: 4 (lower is better)
Translates to: NKCVCHSLRTIVGGGAAAGAAAA*LTPITR
Trigger: CCGTGTTATAGGAGTTAGCCAGGCAGCTGCCGCTCC...AGCTGCCGCTCCTCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp GGCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCCACAAGACCAGTATACTCTACACATATTaGCAAGGGAAGGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: GKGRGLVCLVHGSSHKTSILYTY*QGKGPC
Trigger: ACAAGGCCCCTTCCCTTGCCAATATGTGTAGAGTAT...ACTGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp GCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCCACAAGACCAGTTATCATGATGAGGTGGTaGAGAACATCTGTGGACCAG +
Preference number: 4 (lower is better)
Translates to: AREGALSVLFTAVATRPVIMMRW*RTSVDQ
Trigger: CTGGTCCACAGATGTTCTCCACCACCTCATCATGAT...AACTGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR TCA 90 bp TCTGGGGATGGCTTTACTAAGACTTGGGGAAGTGAGGTCCAGTTCTGCTTCATCACTGCAGCCCTGACTTaGGTATGGAGAAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SGDGFTKTWGSEVQFCFITAALT*VWRKEA
Trigger: AGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGT...GATGAAGCAGAACTGGACCTCACTTCCCCAAGTCTTAGTAAAGCCATCCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR TCA 90 bp TTACTAAGACTTGGGGAAGTGAGGTCCAGTTCTGCTTCATCCGATTTACCTTCGGGTATGGAGGAGGGGTaGGGTCATTGCCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LLRLGEVRSSSASSDLPSGMEEG*GHCPRS
Trigger: TGACCTTGGGCAATGACCTCACCCCTCCTCCATACC...CGAAGGTAAATCGGATGAAGCAGAACTGGACCTCACTTCCCCAAGTCTTAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR GCA 90 bp GGGAGGGAGATGGCACTCAGAGACAGTTCTACAAGGGTAAAGCCAACTCAACAGGTTGGCTCTCAAATGTaGCCATGCTCCCGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GREMALRDSSTRVKPTQQVGSQM*PCSRSS
Trigger: TGAAGAACGGGAGCATGGGCACATTTGAGAGCCAAC...CTGTTGAGTTGGCTTTACCCTTGTAGAACTGTCTCTGAGTGCCATCTCCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR GCA 90 bp GGCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCCACAAGACCAGTATTGAATTGGAAGGTTaGCCTGTGATCTCTCCCATT +
Preference number: 4 (lower is better)
Translates to: GKGRGLVCLVHGSSHKTSIELEG*PVISPI
Trigger: AATGGGAGAGATCACAGGGCAACCTTCCAATTCAAT...ACTGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR GCA 90 bp CATCTCCCATGTCATCAGTTGAAAGATTGGAACTCCCTGCGTGGGGGCTCAGCTCAAAGTGCTATTCTCTaGCCCCCAACAATGTGGTCT +
Preference number: 4 (lower is better)
Translates to: HLPCHQLKDWNSLRGGSAQSAIL*PPTMWS
Trigger: AGACCACATTGTTGGGGGGCAGAGAATAGCACTTTG...AGCTGAGCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGACATGGGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTAGGACTCCCCCGGTCTaGTCTCGCAGGAGGCGCTTC +
Preference number: 4 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTRTPPV*SRRRRF
Trigger: GAAGCGCCTCCTGCGAGACCAGACCGGGGGAGTCCT...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp CATCTCCCATGTCATCAGTTGAAAGATTGGAACTCCCTGCGTGGGGGCTCAGCTAGAAGCTATAGAGACTaGAAAATCCCCTGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: HLPCHQLKDWNSLRGGSARSYRD*KIPCSA
Trigger: TGCGGAGCAGGGGATTTTCCAGTCTCTATAGCTTCT...AGCTGAGCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGACATGGGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp CATCTCCCATGTCATCAGTTGAAAGATTGGAACTCCCTGCGTGGGGGCTCAGCTCAGCAGCAGTTTCACTaGGGCAATGCCGTGTTATTA +
Preference number: 4 (lower is better)
Translates to: HLPCHQLKDWNSLRGGSAQQQFH*GNAVLL
Trigger: TAATAACACGGCATTGCCCCAGTGAAACTGCTGCTG...AGCTGAGCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGACATGGGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp AATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAGGAGCGGCAGCTGGTGGAGAACATCTGTaGACCAGAAGGGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: NKCVCHSLRTIVGGGAAAGGEHL*TRRGGR
Trigger: TCTCCCTCCCCTTCTGGTCCACAGATGTTCTCCACC...AGCTGCCGCTCCTCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR CAA 72 bp GGGCTTCCCTGGCTGCTCTCTAAATCACGTCCCCCATaGAACCCCAAATACTCTACACATATTGGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: GLPWLLSKSRPP*NPKYSTHIGKG
Trigger: TCCCTTGCCAATATGTGTAGAGTATTTGGGGTTCAATGGGGGACGTGATTTAGAGAGCAGCCAGGGAAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR TCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGTGGGGCAGCCCTTGTTaGTCAGCTGCCACTGCAAGG +
Preference number: 4 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMWGSPC*SAATAR
Trigger: CCTTGCAGTGGCAGCTGATCAACAAGGGCTGCCCCA...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp TCTGGGGATGGCTTTACTAAGACTTGGGGAAGTGAGGTCCAGTTCTGCTTCATCGTGTTTGTCATTCGCTaGGGACTATTGTGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SGDGFTKTWGSEVQFCFIVFVIR*GLLWVE
Trigger: CTCCACCCACAATAGTCCTCAGCGAATGACAAACAC...GATGAAGCAGAACTGGACCTCACTTCCCCAAGTCTTAGTAAAGCCATCCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR TCA 90 bp CATCTCCCATGTCATCAGTTGAAAGATTGGAACTCCCTGCGTGGGGGCTCAGCTATGACACTGCCTCAATaGCAAAGCTCCTTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: HLPCHQLKDWNSLRGGSAMTLPQ*QSSFLA
Trigger: TGCCAAAAAGGAGCTTTGTCATTGAGGCAGTGTCAT...AGCTGAGCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGACATGGGAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp TCTACACATATTGGCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCTCCCATGTCATCAGTTaGAAGATTGGAACTCCCTGC +
Preference number: 4 (lower is better)
Translates to: STHIGKGRGLVCLVHGSSSHVIS*KIGTPC
Trigger: GCAGGGAGTTCCAATCTTTCAACTGATGACATGGGA...GCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGCCAATATGTGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR TCA 90 bp ATGTTTCTTCCTCTAAGGGGCTTCCCTGGCTGCTCTCTAAATCACGTCCCCCATTCCCATGTCATCAGTTaGAAGATTGGAACTCCCTGC +
Preference number: 4 (lower is better)
Translates to: MFLPLRGFPGCSLNHVPHSHVIS*KIGTPC
Trigger: GCAGGGAGTTCCAATCTTTCAACTGATGACATGGGA...ATGGGGGACGTGATTTAGAGAGCAGCCAGGGAAGCCCCTTAGAGGAAGAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR TCA 90 bp TCTACACATATTGGCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCCGTTGGAAGCGTCAATaGCACATGGAGTTGTTCATG +
Preference number: 4 (lower is better)
Translates to: STHIGKGRGLVCLVHGSSRWKRQ*HMELFM
Trigger: CATGAACAACTCCATGTGTCATTGACGCTTCCAACG...GCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGCCAATATGTGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR TCA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTGGTCCTTCCAGGGCCTaGGCCTCGATCATTCGTTGG +
Preference number: 4 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFGPSRA*ASIIRW
Trigger: CCAACGAATGATCGAGGCTCAGGCCCTGGAAGGACC...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGGGTCCTTCCAGGGCCTaGGCCTCGATCATTCGTTGG +
Preference number: 4 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKGPSRA*ASIIRW
Trigger: CCAACGAATGATCGAGGCTCAGGCCCTGGAAGGACC...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp TTACAGAAAGAAGAGATCCTAAACTCGTTGGAACTCCAGCTTAGAGACCAAGTCGGTCCTTCCAGGGCCTaGGCCTCGATCATTCGTTGG +
Preference number: 4 (lower is better)
Translates to: LQKEEILNSLELQLRDQVGPSRA*ASIIRW
Trigger: CCAACGAATGATCGAGGCTCAGGCCCTGGAAGGACC...GACTTGGTCTCTAAGCTGGAGTTCCAACGAGTTTAGGATCTCTTCTTTCTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TGGGTCTTAGCTGAAATGTTTCTTCCTCTAAGGGGCTTCCCTGGCTGCTCTCTATCAGAACCTGGTCTCTaGCAGGTATCCAAACCAAGC +
Preference number: 4 (lower is better)
Translates to: WVLAEMFLPLRGFPGCSLSEPGL*QVSKPS
Trigger: GCTTGGTTTGGATACCTGGCAGAGACCAGGTTCTGA...TAGAGAGCAGCCAGGGAAGCCCCTTAGAGGAAGAAACATTTCAGCTAAGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR GCA 90 bp CATCTCCCATGTCATCAGTTGAAAGATTGGAACTCCCTGCGTGGGGGCTCAGCTTGGAGCACACGATTTTaGAGAGGCTTCTGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: HLPCHQLKDWNSLRGGSAWSTRF*RGFCKD
Trigger: ATCTTTGCAGAAGCCTCTGCAAAATCGTGTGCTCCA...AGCTGAGCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGACATGGGAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TGGGTCTTAGCTGAAATGTTTCTTCCTCTAAGGGGCTTCCCTGGCTGCTCTCTATCTCTCCCATTCTCATaGACGAGGACGGTTTCATCC +
Preference number: 4 (lower is better)
Translates to: WVLAEMFLPLRGFPGCSLSLPFS*TRTVSS
Trigger: GGATGAAACCGTCCTCGTGCATGAGAATGGGAGAGA...TAGAGAGCAGCCAGGGAAGCCCCTTAGAGGAAGAAACATTTCAGCTAAGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR GCA 90 bp GGCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCCACAAGACCAGTTTCAAAGGAATTTACTaGAGCCCTGACTTGAGTATG +
Preference number: 4 (lower is better)
Translates to: GKGRGLVCLVHGSSHKTSFKGIY*SPDLSM
Trigger: CATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAA...ACTGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp GGGAGGGAGATGGCACTCAGAGACAGTTCTACAAGGGTAAAGCCAACTCAACAGTTGCTTCTCAGAACCTaGTCTCTGCCAGGTATCCAA +
Preference number: 4 (lower is better)
Translates to: GREMALRDSSTRVKPTQQLLLRT*SLPGIQ
Trigger: TTGGATACCTGGCAGAGACCAGGTTCTGAGAAGCAA...CTGTTGAGTTGGCTTTACCCTTGTAGAACTGTCTCTGAGTGCCATCTCCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp GCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCCACAAGACCAGTTTCACTGTGGTGTCATTaGAAACGATGTGACTGTAGA +
Preference number: 4 (lower is better)
Translates to: AREGALSVLFTAVATRPVSLWCH*KRCDCR
Trigger: TCTACAGTCACATCGTTTCCAATGACACCACAGTGA...AACTGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp CATCTCCCATGTCATCAGTTGAAAGATTGGAACTCCCTGCGTGGGGGCTCAGCTAGTGTAACCACACCTTaGAGAGTTTGGGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: HLPCHQLKDWNSLRGGSASVTTP*RVWGCS
Trigger: AGAACATCCCCAAACTCTCCAAGGTGTGGTTACACT...AGCTGAGCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGACATGGGAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAGAGGACTATTGTGGGTaGAGGAGCGGCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGEDYCG*RSGSCL
Trigger: CAGGCAGCTGCCGCTCCTCCACCCACAATAGTCCTC...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTTTGGAACTCCCTGCGTaGGGGCTCAGCTCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFLELPA*GLSSGP
Trigger: AGGACCAGAGCTGAGCCCCCACGCAGGGAGTTCCAA...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp ATGTTTCTTCCTCTAAGGGGCTTCCCTGGCTGCTCTCTAAATCACGTCCCCCATGGCTTTACTAAGACTTaGGGAAGTGAGGTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: MFLPLRGFPGCSLNHVPHGFTKT*GSEVQF
Trigger: GAACTGGACCTCACTTCCCCAAGTCTTAGTAAAGCC...ATGGGGGACGTGATTTAGAGAGCAGCCAGGGAAGCCCCTTAGAGGAAGAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp TGGGTCTTAGCTGAAATGTTTCTTCCTCTAAGGGGCTTCCCTGGCTGCTCTCTAGAGGAAACTAGGGTATaGAGGAGGGGTGAGGTCATT +
Preference number: 4 (lower is better)
Translates to: WVLAEMFLPLRGFPGCSLEETRV*RRGEVI
Trigger: AATGACCTCACCCCTCCTCCATACCCTAGTTTCCTC...TAGAGAGCAGCCAGGGAAGCCCCTTAGAGGAAGAAACATTTCAGCTAAGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp TCTACACATATTGGCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCATCATGATGAGGTGGTaGAGAACATCTGTGGACCAG +
Preference number: 4 (lower is better)
Translates to: STHIGKGRGLVCLVHGSSIMMRW*RTSVDQ
Trigger: CTGGTCCACAGATGTTCTCCACCACCTCATCATGAT...GCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGCCAATATGTGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR CAA 72 bp CCAAATACTCTACACATATTGGCAAGGGAAGGGGCCTaGTCTGTCTTGTTCACGGCAGTAGCCACAAGACCA +
Preference number: 4 (lower is better)
Translates to: PNTLHILAREGA*SVLFTAVATRP
Trigger: TGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGCCAATATGTGTAGAGTATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR TCA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGACTGCAAGGGATACATaGAGTCAGCCGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKTARDT*SQPRGW
Trigger: CCACCCCCTCGGCTGACTTCATGTATCCCTTGCAGT...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTGGGGCAGCCCTTGTTaGTCAGCTGCCACTGCAAGG +
Preference number: 4 (lower is better)
Translates to: QDVLLHAFIGCICICVSDWGSPC*SAATAR
Trigger: CCTTGCAGTGGCAGCTGATCAACAAGGGCTGCCCCA...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTTGGGGCAGCCCTTGTTaGTCAGCTGCCACTGCAAGG +
Preference number: 4 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTWGSPC*SAATAR
Trigger: CCTTGCAGTGGCAGCTGATCAACAAGGGCTGCCCCA...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp AATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAGGAGCGGCAGCTGTGTTTGTCATTCGCTaGGGACTATTGTGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: NKCVCHSLRTIVGGGAAAVFVIR*GLLWVE
Trigger: CTCCACCCACAATAGTCCTCAGCGAATGACAAACAC...AGCTGCCGCTCCTCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp GCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCCACAAGACCAGTTCACAAGAATGACATCTaGTTTATTTGGAGCACACGA +
Preference number: 4 (lower is better)
Translates to: AREGALSVLFTAVATRPVHKNDI*FIWSTR
Trigger: TCGTGTGCTCCAAATAAAGCAGATGTCATTCTTGTG...AACTGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR GCA 90 bp TCTGGGGATGGCTTTACTAAGACTTGGGGAAGTGAGGTCCAGTTCTGCTTCATCTCTCAAATGTGCCCATaGTCCCGTTCTTCACGTGAA +
Preference number: 4 (lower is better)
Translates to: SGDGFTKTWGSEVQFCFISQMCP*SRSSRE
Trigger: TTCACGTGAAGAACGGGAGCATGGGCACATTTGAGA...GATGAAGCAGAACTGGACCTCACTTCCCCAAGTCTTAGTAAAGCCATCCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR GCA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCGTTGGCTCTCAAATGTaGCCATGCTCCCGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSVGSQM*PCSRSS
Trigger: TGAAGAACGGGAGCATGGGCACATTTGAGAGCCAAC...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGAAGATTGGAACTCCCTaGGTGGGGGCTCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMKIGTP*VGAQLW
Trigger: CCAGAGCTGAGCCCCCACGCAGGGAGTTCCAATCTT...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TCTGGGGATGGCTTTACTAAGACTTGGGGAAGTGAGGTCCAGTTCTGCTTCATCTTGCTTCTCAGAACCTaGTCTCTGCCAGGTATCCAA +
Preference number: 4 (lower is better)
Translates to: SGDGFTKTWGSEVQFCFILLLRT*SLPGIQ
Trigger: TTGGATACCTGGCAGAGACCAGGTTCTGAGAAGCAA...GATGAAGCAGAACTGGACCTCACTTCCCCAAGTCTTAGTAAAGCCATCCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCTCTTCACGTGAACAGTaGCCACTCTCTGGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSSSREQ*PLSGQR
Trigger: CCTTTGACCAGAGAGTGGCCACTGTTCACGTGAAGA...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAAGTCAGCCGAGGGGGTaGCCCAACAGCTGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGSQPRG*PNSCSR
Trigger: TCTTGAACAGCTGTTGGGCCACCCCCTCGGCTGACT...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGAGTCAGCCGAGGGGGTaGCCCAACAGCTGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKSQPRG*PNSCSR
Trigger: TCTTGAACAGCTGTTGGGCCACCCCCTCGGCTGACT...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp AATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAGGAGCGGCAGCTACACCTTGGAGAGTTTaGGGATGTTCTGGAACCGGA +
Preference number: 4 (lower is better)
Translates to: NKCVCHSLRTIVGGGAAATPWRV*GCSGTG
Trigger: TCCGGTTCCAGAACATCCCCAAACTCTCCAAGGTGT...AGCTGCCGCTCCTCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TCTACACATATTGGCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCAGTGTAACCACACCTTaGAGAGTTTGGGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: STHIGKGRGLVCLVHGSSSVTTP*RVWGCS
Trigger: AGAACATCCCCAAACTCTCCAAGGTGTGGTTACACT...GCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGCCAATATGTGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTTTGGAACTCCCTGCGTaGGGGCTCAGCTCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTLELPA*GLSSGP
Trigger: AGGACCAGAGCTGAGCCCCCACGCAGGGAGTTCCAA...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp ATGTTTCTTCCTCTAAGGGGCTTCCCTGGCTGCTCTCTAAATCACGTCCCCCATATACTCTACACATATTaGCAAGGGAAGGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: MFLPLRGFPGCSLNHVPHILYTY*QGKGPC
Trigger: ACAAGGCCCCTTCCCTTGCCAATATGTGTAGAGTAT...ATGGGGGACGTGATTTAGAGAGCAGCCAGGGAAGCCCCTTAGAGGAAGAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR TCA 90 bp AAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTTGGGGCAGCCCTTGTTaGTCAGCTGCCACTGCAAGG +
Preference number: 4 (lower is better)
Translates to: KMCYCMLSLAAFAFVFLIWGSPC*SAATAR
Trigger: CCTTGCAGTGGCAGCTGATCAACAAGGGCTGCCCCA...AATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp AATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAGGAGCGGCAGCTCGTTGGAAGCGTCAATaGCACATGGAGTTGTTCATG +
Preference number: 4 (lower is better)
Translates to: NKCVCHSLRTIVGGGAAARWKRQ*HMELFM
Trigger: CATGAACAACTCCATGTGTCATTGACGCTTCCAACG...AGCTGCCGCTCCTCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTGGTATGGAGGAGGGGTaGGGTCATTGCCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: SYQDVLLHAFIGCICICVGMEEG*GHCPRS
Trigger: TGACCTTGGGCAATGACCTCACCCCTCCTCCATACC...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR GCA 90 bp TTACAGAAAGAAGAGATCCTAAACTCGTTGGAACTCCAGCTTAGAGACCAAGTCTGGAGGAGCGGCAGCTaGCTGGCTAACTCCTATAAC +
Preference number: 4 (lower is better)
Translates to: LQKEEILNSLELQLRDQVWRSGS*LANSYN
Trigger: GTTATAGGAGTTAGCCAGGCAGCTGCCGCTCCTCCA...GACTTGGTCTCTAAGCTGGAGTTCCAACGAGTTTAGGATCTCTTCTTTCTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCCAAAGTGCTATTCTCTaGCCCCCAACAATGTGGTCT +
Preference number: 4 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSQSAIL*PPTMWS
Trigger: AGACCACATTGTTGGGGGGCAGAGAATAGCACTTTG...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTAAGATTGGAACTCCCTaGGTGGGGGCTCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTKIGTP*VGAQLW
Trigger: CCAGAGCTGAGCCCCCACGCAGGGAGTTCCAATCTT...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TCTACACATATTGGCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCTCACTGTGGTGTCATTaGAAACGATGTGACTGTAGA +
Preference number: 4 (lower is better)
Translates to: STHIGKGRGLVCLVHGSSSLWCH*KRCDCR
Trigger: TCTACAGTCACATCGTTTCCAATGACACCACAGTGA...GCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGCCAATATGTGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATAGTCAGCCGAGGGGGTaGCCCAACAGCTGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: QDVLLHAFIGCICICVSDSQPRG*PNSCSR
Trigger: TCTTGAACAGCTGTTGGGCCACCCCCTCGGCTGACT...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TCTACACATATTGGCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCAGTTTGGGGATGTTCTaGAACCGGAAAGCATTGAAT +
Preference number: 4 (lower is better)
Translates to: STHIGKGRGLVCLVHGSSSLGMF*NRKALN
Trigger: ATTCAATGCTTTCCGGTTCCAGAACATCCCCAAACT...GCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGCCAATATGTGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCAGAAGCTATAGAGACTaGAAAATCCCCTGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSRSYRD*KIPCSA
Trigger: TGCGGAGCAGGGGATTTTCCAGTCTCTATAGCTTCT...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp CCTTTTTGGCAAAGTCAGCTATTAATGTGCGTTGTGCATTTAGTGTTGACTTTGGAGGACTATTGTGGGTaGAGGAGCGGCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PFWQSQLLMCVVHLVLTLEDYCG*RSGSCL
Trigger: CAGGCAGCTGCCGCTCCTCCACCCACAATAGTCCTC...CAAAGTCAACACTAAATGCACAACGCACATTAATAGCTGACTTTGCCAAAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TTACTAAGACTTGGGGAAGTGAGGTCCAGTTCTGCTTCATCCGATTTACCTTCGGTGGGGGCTCAGCTCTaGTCCTTAAGTAGAATGACA +
Preference number: 4 (lower is better)
Translates to: LLRLGEVRSSSASSDLPSVGAQL*SLSRMT
Trigger: TGTCATTCTACTTAAGGACCAGAGCTGAGCCCCCAC...CGAAGGTAAATCGGATGAAGCAGAACTGGACCTCACTTCCCCAAGTCTTAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCCAGCAGCAGTTTCACTaGGGCAATGCCGTGTTATTA +
Preference number: 4 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSQQQFH*GNAVLL
Trigger: TAATAACACGGCATTGCCCCAGTGAAACTGCTGCTG...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp CATCTCCCATGTCATCAGTTGAAAGATTGGAACTCCCTGCGTGGGGGCTCAGCTACTGCATGCTTTCATTaGCTGCATTTGCATTTGTGT +
Preference number: 4 (lower is better)
Translates to: HLPCHQLKDWNSLRGGSATACFH*LHLHLC
Trigger: ACACAAATGCAAATGCAGCCAATGAAAGCATGCAGT...AGCTGAGCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGACATGGGAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp AAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTACTGCAAGGGATACATaGAGTCAGCCGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: KMCYCMLSLAAFAFVFLITARDT*SQPRGW
Trigger: CCACCCCCTCGGCTGACTTCATGTATCCCTTGCAGT...AATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp TTACAGAAAGAAGAGATCCTAAACTCGTTGGAACTCCAGCTTAGAGACCAAGTCACTGCAGCCCTGACTTaGGTATGGAGAAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LQKEEILNSLELQLRDQVTAALT*VWRKEA
Trigger: AGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGT...GACTTGGTCTCTAAGCTGGAGTTCCAACGAGTTTAGGATCTCTTCTTTCTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGACTGCAGCCCTGACTTaGGTATGGAGAAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMTAALT*VWRKEA
Trigger: AGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGT...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCAATTTACTGCAGCCCTaGCTTGAGTATGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSNLLQP*LEYGER
Trigger: CCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATT...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCATGACACTGCCTCAATaGCAAAGCTCCTTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSMTLPQ*QSSFLA
Trigger: TGCCAAAAAGGAGCTTTGTCATTGAGGCAGTGTCAT...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp AATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAGGAGCGGCAGCTTGGAGCACACGATTTTaGAGAGGCTTCTGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: NKCVCHSLRTIVGGGAAAWSTRF*RGFCKD
Trigger: ATCTTTGCAGAAGCCTCTGCAAAATCGTGTGCTCCA...AGCTGCCGCTCCTCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTTGGAGGAGCGGCAGCTaGCTGGCTAACTCCTATAAC +
Preference number: 4 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTWRSGS*LANSYN
Trigger: GTTATAGGAGTTAGCCAGGCAGCTGCCGCTCCTCCA...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TTACTAAGACTTGGGGAAGTGAGGTCCAGTTCTGCTTCATCCGATTTACCTTCGCAAAGTGCTATTCTCTaGCCCCCAACAATGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LLRLGEVRSSSASSDLPSQSAIL*PPTMWS
Trigger: AGACCACATTGTTGGGGGGCAGAGAATAGCACTTTG...CGAAGGTAAATCGGATGAAGCAGAACTGGACCTCACTTCCCCAAGTCTTAGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR GCA 90 bp ATGTTTCTTCCTCTAAGGGGCTTCCCTGGCTGCTCTCTAAATCACGTCCCCCATTTCAAAGGAATTTACTaGAGCCCTGACTTGAGTATG +
Preference number: 4 (lower is better)
Translates to: MFLPLRGFPGCSLNHVPHFKGIY*SPDLSM
Trigger: CATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAA...ATGGGGGACGTGATTTAGAGAGCAGCCAGGGAAGCCCCTTAGAGGAAGAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR GCA 90 bp TTAGGTTTGAGCAAAACTATTGTATTCCACTCTGAATCCCACATCATCTCCCATAAGATTGGAACTCCCTaGGTGGGGGCTCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LGLSKTIVFHSESHIISHKIGTP*VGAQLW
Trigger: CCAGAGCTGAGCCCCCACGCAGGGAGTTCCAATCTT...ATGGGAGATGATGTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAACTGTAGAGGCTGGCTaGTGGATGCTCCCCAAATCT +
Preference number: 4 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGTVEAG*WMLPKS
Trigger: AGATTTGGGGAGCATCCAGCAGCCAGCCTCTACAGT...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000646139.2
CDS-3UTR CCA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTACAGTGGCCACTCTCTaGTCAAAGGCAGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SYQDVLLHAFIGCICICVTVATL*SKAAWF
Trigger: GAACCAGGCTGCCTTTGACCAGAGAGTGGCCACTGT...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TCGATTTTGTTCATCCCTTGGGGATTCTGTAGCTCACATTTATCAGTACAAAGAAGTCAGCCGAGGGGGTaGCCCAACAGCTGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: SILFIPWGFCSSHLSVQRSQPRG*PNSCSR
Trigger: TCTTGAACAGCTGTTGGGCCACCCCCTCGGCTGACT...TCTTTGTACTGATAAATGTGAGCTACAGAATCCCCAAGGGATGAACAAAATCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp AATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAGGAGCGGCAGCTAGTGTAACCACACCTTaGAGAGTTTGGGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: NKCVCHSLRTIVGGGAAASVTTP*RVWGCS
Trigger: AGAACATCCCCAAACTCTCCAAGGTGTGGTTACACT...AGCTGCCGCTCCTCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp CCTTTTTGGCAAAGTCAGCTATTAATGTGCGTTGTGCATTTAGTGTTGACTTTGGGAGCGGCAGCTGCCTaGCTAACTCCTATAACACGG +
Preference number: 4 (lower is better)
Translates to: PFWQSQLLMCVVHLVLTLGAAAA*LTPITR
Trigger: CCGTGTTATAGGAGTTAGCCAGGCAGCTGCCGCTCC...CAAAGTCAACACTAAATGCACAACGCACATTAATAGCTGACTTTGCCAAAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TCGATTTTGTTCATCCCTTGGGGATTCTGTAGCTCACATTTATCAGTACAAAGAGGAGCGGCAGCTGCCTaGCTAACTCCTATAACACGG +
Preference number: 4 (lower is better)
Translates to: SILFIPWGFCSSHLSVQRGAAAA*LTPITR
Trigger: CCGTGTTATAGGAGTTAGCCAGGCAGCTGCCGCTCC...TCTTTGTACTGATAAATGTGAGCTACAGAATCCCCAAGGGATGAACAAAATCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp AATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAGGAGCGGCAGCTATGCTCAGCAGTACTTaGTTGGGTCTGCTAACCTTT +
Preference number: 4 (lower is better)
Translates to: NKCVCHSLRTIVGGGAAAMLSST*LGLLTF
Trigger: AAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCAT...AGCTGCCGCTCCTCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp CATCTCCCATGTCATCAGTTGAAAGATTGGAACTCCCTGCGTGGGGGCTCAGCTGACAAAGCTCCTTTTTaGCAAAGTCAGCTATTAATG +
Preference number: 4 (lower is better)
Translates to: HLPCHQLKDWNSLRGGSADKAPF*QSQLLM
Trigger: CATTAATAGCTGACTTTGCCAAAAAGGAGCTTTGTC...AGCTGAGCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGACATGGGAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGCATCAGTTGAAAGATTaGAACTCCCTGCGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMHQLKD*NSLRGG
Trigger: GCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATG...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp GGGAGGGAGATGGCACTCAGAGACAGTTCTACAAGGGTAAAGCCAACTCAACAGACTGCATGCTTTCATTaGCTGCATTTGCATTTGTGT +
Preference number: 4 (lower is better)
Translates to: GREMALRDSSTRVKPTQQTACFH*LHLHLC
Trigger: ACACAAATGCAAATGCAGCCAATGAAAGCATGCAGT...CTGTTGAGTTGGCTTTACCCTTGTAGAACTGTCTCTGAGTGCCATCTCCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCAGCGTCAATGACACATaGAGTTGTTCATGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSSVNDT*SCSCSR
Trigger: TCGGGAACATGAACAACTCCATGTGTCATTGACGCT...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR CAA 72 bp AAAATAGCTTTCAAAGGAATTTACTGCAGCCCTGACTaGAGTATGGAGAAAGGAGGCTCCTCCCCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: KIAFKGIYCSPD*SMEKGGSSPSC
Trigger: ACAGCTGGGGGAGGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGCTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGTCCTGCAAACAGATCTaGACCGATTTCGGATGCCTC +
Preference number: 4 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKSCKQI*TDFGCL
Trigger: GAGGCATCCGAAATCGGTTCAGATCTGTTTGCAGGA...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTGGAACCGGAAAGCATTaGATTGGAAGGTTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFGTGKH*IGRLPC
Trigger: ACAGGGCAACCTTCCAATTCAATGCTTTCCGGTTCC...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGTCTCACTGTCGCAGATaGACGTCTCACAGTGTAACC +
Preference number: 4 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMSHCRR*TSHSVT
Trigger: GGTTACACTGTGAGACGTTCATCTGCGACAGTGAGA...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCTATTGTATTCCACTCTaGATCCCACATCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSYCIPL*IPHHLP
Trigger: TGGGAGATGATGTGGGATTCAGAGTGGAATACAATA...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGTCAGAACCTGGTCTCTaGCAGGTATCCAAACCAAGC +
Preference number: 4 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKSEPGL*QVSKPS
Trigger: GCTTGGTTTGGATACCTGGCAGAGACCAGGTTCTGA...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATGGCCTTCGTCACCATTaGTTCTCAGAACCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: QDVLLHAFIGCICICVSDGLRHH*FSEPGL
Trigger: GAGACCAGGTTCTGAGAAGCAATGGTGACGAAGGCC...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TTACTAAGACTTGGGGAAGTGAGGTCCAGTTCTGCTTCATCCGATTTACCTTCGTGGAGCACACGATTTTaGAGAGGCTTCTGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: LLRLGEVRSSSASSDLPSWSTRF*RGFCKD
Trigger: ATCTTTGCAGAAGCCTCTGCAAAATCGTGTGCTCCA...CGAAGGTAAATCGGATGAAGCAGAACTGGACCTCACTTCCCCAAGTCTTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR GCA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTGTTGGCTCTCAAATGTaGCCATGCTCCCGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFVGSQM*PCSRSS
Trigger: TGAAGAACGGGAGCATGGGCACATTTGAGAGCCAAC...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TTACAGAAAGAAGAGATCCTAAACTCGTTGGAACTCCAGCTTAGAGACCAAGTCCCCTTGTTGATCAGCTaGCACTGCAAGGGATACATG +
Preference number: 4 (lower is better)
Translates to: LQKEEILNSLELQLRDQVPLLIS*HCKGYM
Trigger: CATGTATCCCTTGCAGTGGCAGCTGATCAACAAGGG...GACTTGGTCTCTAAGCTGGAGTTCCAACGAGTTTAGGATCTCTTCTTTCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGTCTCTCCCATTCTCATaGACGAGGACGGTTTCATCC +
Preference number: 4 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKSLPFS*TRTVSS
Trigger: GGATGAAACCGTCCTCGTGCATGAGAATGGGAGAGA...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp CCTTTTTGGCAAAGTCAGCTATTAATGTGCGTTGTGCATTTAGTGTTGACTTTGTGGAGGAGCGGCAGCTaGCTGGCTAACTCCTATAAC +
Preference number: 4 (lower is better)
Translates to: PFWQSQLLMCVVHLVLTLWRSGS*LANSYN
Trigger: GTTATAGGAGTTAGCCAGGCAGCTGCCGCTCCTCCA...CAAAGTCAACACTAAATGCACAACGCACATTAATAGCTGACTTTGCCAAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TCTACACATATTGGCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCCATGCTTTCATTGGCTaGATTTGCATTTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: STHIGKGRGLVCLVHGSSHAFIG*ICICVS
Trigger: AGAAACACAAATGCAAATGCAGCCAATGAAAGCATG...GCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGCCAATATGTGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp TTACTAAGACTTGGGGAAGTGAGGTCCAGTTCTGCTTCATCCGATTTACCTTCGAAGTTGAGAGACAGTTaGCTCTCAAATGTGCCCATG +
Preference number: 4 (lower is better)
Translates to: LLRLGEVRSSSASSDLPSKLRDS*LSNVPM
Trigger: CATGGGCACATTTGAGAGCCAACTGTCTCTCAACTT...CGAAGGTAAATCGGATGAAGCAGAACTGGACCTCACTTCCCCAAGTCTTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCAGTTTGGGGATGTTCTaGAACCGGAAAGCATTGAAT +
Preference number: 4 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSSLGMF*NRKALN
Trigger: ATTCAATGCTTTCCGGTTCCAGAACATCCCCAAACT...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTACACCTTGGAGAGTTTaGGGATGTTCTGGAACCGGA +
Preference number: 4 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFTPWRV*GCSGTG
Trigger: TCCGGTTCCAGAACATCCCCAAACTCTCCAAGGTGT...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGACACCTTGGAGAGTTTaGGGATGTTCTGGAACCGGA +
Preference number: 4 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKTPWRV*GCSGTG
Trigger: TCCGGTTCCAGAACATCCCCAAACTCTCCAAGGTGT...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAGTGGGGGCTCAGCTCTaGTCCTTAAGTAGAATGACA +
Preference number: 4 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGVGAQL*SLSRMT
Trigger: TGTCATTCTACTTAAGGACCAGAGCTGAGCCCCCAC...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTGTGGGGGCTCAGCTCTaGTCCTTAAGTAGAATGACA +
Preference number: 4 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFVGAQL*SLSRMT
Trigger: TGTCATTCTACTTAAGGACCAGAGCTGAGCCCCCAC...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGGTGGGGGCTCAGCTCTaGTCCTTAAGTAGAATGACA +
Preference number: 4 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKVGAQL*SLSRMT
Trigger: TGTCATTCTACTTAAGGACCAGAGCTGAGCCCCCAC...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATCATCAGTTGAAAGATTaGAACTCCCTGCGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: QDVLLHAFIGCICICVSDHQLKD*NSLRGG
Trigger: GCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATG...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTCATCAGTTGAAAGATTaGAACTCCCTGCGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTHQLKD*NSLRGG
Trigger: GCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATG...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TCTCTTCAAAATGCTCAGCAGTACTTGGTTGGGTCTGCTAACCTTTTAAAGTTATCAGAGTTCAGGGGCTaGTCAGAGGGAGACCTCTTG +
Preference number: 4 (lower is better)
Translates to: SLQNAQQYLVGSANLLKLSEFRG*SEGDLL
Trigger: CAAGAGGTCTCCCTCTGACCAGCCCCTGAACTCTGA...TAACTTTAAAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATTTTGAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGATCTAAGGGGCTTCCCTaGCTGCTCTCTAAATCACGT +
Preference number: 4 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGSKGLP*LLSKSR
Trigger: ACGTGATTTAGAGAGCAGCCAGGGAAGCCCCTTAGA...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR TCA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTTCCTGCAAACAGATCTaGACCGATTTCGGATGCCTC +
Preference number: 4 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTSCKQI*TDFGCL
Trigger: GAGGCATCCGAAATCGGTTCAGATCTGTTTGCAGGA...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTGGAACCGGAAAGCATTaGATTGGAAGGTTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTGTGKH*IGRLPC
Trigger: ACAGGGCAACCTTCCAATTCAATGCTTTCCGGTTCC...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTCACTGTCGCAGATaGACGTCTCACAGTGTAACC +
Preference number: 4 (lower is better)
Translates to: SYQDVLLHAFIGCICICVSHCRR*TSHSVT
Trigger: GGTTACACTGTGAGACGTTCATCTGCGACAGTGAGA...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp AAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTCTCCCGTTCTTCACGTaGACAGTGGCCACTCTGAAA +
Preference number: 4 (lower is better)
Translates to: KMCYCMLSLAAFAFVFLILPFFT*TVATLK
Trigger: TTTCAGAGTGGCCACTGTTCACGTGAAGAACGGGAG...AATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643850.1
CDS-3UTR GCA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCCACAAGAATGACATCTaGTTTATTTGGAGCACACGA +
Preference number: 4 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSHKNDI*FIWSTR
Trigger: TCGTGTGCTCCAAATAAAGCAGATGTCATTCTTGTG...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTTCTCAAATGTGCCCATaGTCCCGTTCTTCACGTGAA +
Preference number: 4 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFSQMCP*SRSSRE
Trigger: TTCACGTGAAGAACGGGAGCATGGGCACATTTGAGA...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTCCCTTGTTGATCAGCTaGCACTGCAAGGGATACATG +
Preference number: 4 (lower is better)
Translates to: SYQDVLLHAFIGCICICVPLLIS*HCKGYM
Trigger: CATGTATCCCTTGCAGTGGCAGCTGATCAACAAGGG...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTCCCTTGTTGATCAGCTaGCACTGCAAGGGATACATG +
Preference number: 4 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTPLLIS*HCKGYM
Trigger: CATGTATCCCTTGCAGTGGCAGCTGATCAACAAGGG...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp AATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAGGAGCGGCAGCTTTCAAAGGAATTTACTaGAGCCCTGACTTGAGTATG +
Preference number: 4 (lower is better)
Translates to: NKCVCHSLRTIVGGGAAAFKGIY*SPDLSM
Trigger: CATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAA...AGCTGCCGCTCCTCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TCTGGGGATGGCTTTACTAAGACTTGGGGAAGTGAGGTCCAGTTCTGCTTCATCAGTCAGCTATTAATGTaGGTTGTGCATTTAGTGTTG +
Preference number: 4 (lower is better)
Translates to: SGDGFTKTWGSEVQFCFISQLLM*VVHLVL
Trigger: CAACACTAAATGCACAACGCACATTAATAGCTGACT...GATGAAGCAGAACTGGACCTCACTTCCCCAAGTCTTAGTAAAGCCATCCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGTTGCTTCTCAGAACCTaGTCTCTGCCAGGTATCCAA +
Preference number: 4 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMLLLRT*SLPGIQ
Trigger: TTGGATACCTGGCAGAGACCAGGTTCTGAGAAGCAA...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTTCACGTGAACAGTaGCCACTCTCTGGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: SYQDVLLHAFIGCICICVSSREQ*PLSGQR
Trigger: CCTTTGACCAGAGAGTGGCCACTGTTCACGTGAAGA...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TTACTAAGACTTGGGGAAGTGAGGTCCAGTTCTGCTTCATCCGATTTACCTTCGAGTTTGGGGATGTTCTaGAACCGGAAAGCATTGAAT +
Preference number: 4 (lower is better)
Translates to: LLRLGEVRSSSASSDLPSSLGMF*NRKALN
Trigger: ATTCAATGCTTTCCGGTTCCAGAACATCCCCAAACT...CGAAGGTAAATCGGATGAAGCAGAACTGGACCTCACTTCCCCAAGTCTTAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp TTACAGAAAGAAGAGATCCTAAACTCGTTGGAACTCCAGCTTAGAGACCAAGTCTTTATCGCAGGTCACTaGGCAGGAGAGTTTCTCACT +
Preference number: 4 (lower is better)
Translates to: LQKEEILNSLELQLRDQVFIAGH*AGEFLT
Trigger: AGTGAGAAACTCTCCTGCCCAGTGACCTGCGATAAA...GACTTGGTCTCTAAGCTGGAGTTCCAACGAGTTTAGGATCTCTTCTTTCTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGTTTATCGCAGGTCACTaGGCAGGAGAGTTTCTCACT +
Preference number: 4 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMFIAGH*AGEFLT
Trigger: AGTGAGAAACTCTCCTGCCCAGTGACCTGCGATAAA...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp AATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAGGAGCGGCAGCTATTGGAGTGCATATTTaGCAAAGTGCTATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: NKCVCHSLRTIVGGGAAAIGVHI*QSAILC
Trigger: GCAGAGAATAGCACTTTGCCAAATATGCACTCCAAT...AGCTGCCGCTCCTCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCATTGGAGTGCATATTTaGCAAAGTGCTATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSIGVHI*QSAILC
Trigger: GCAGAGAATAGCACTTTGCCAAATATGCACTCCAAT...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TCTGGGGATGGCTTTACTAAGACTTGGGGAAGTGAGGTCCAGTTCTGCTTCATCGACAAAGCTCCTTTTTaGCAAAGTCAGCTATTAATG +
Preference number: 4 (lower is better)
Translates to: SGDGFTKTWGSEVQFCFIDKAPF*QSQLLM
Trigger: CATTAATAGCTGACTTTGCCAAAAAGGAGCTTTGTC...GATGAAGCAGAACTGGACCTCACTTCCCCAAGTCTTAGTAAAGCCATCCCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp CCTTTTTGGCAAAGTCAGCTATTAATGTGCGTTGTGCATTTAGTGTTGACTTTGCATCAGTTGAAAGATTaGAACTCCCTGCGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PFWQSQLLMCVVHLVLTLHQLKD*NSLRGG
Trigger: GCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATG...CAAAGTCAACACTAAATGCACAACGCACATTAATAGCTGACTTTGCCAAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TTACAGAAAGAAGAGATCCTAAACTCGTTGGAACTCCAGCTTAGAGACCAAGTCCAGCAGCAGTTTCACTaGGGCAATGCCGTGTTATTA +
Preference number: 4 (lower is better)
Translates to: LQKEEILNSLELQLRDQVQQQFH*GNAVLL
Trigger: TAATAACACGGCATTGCCCCAGTGAAACTGCTGCTG...GACTTGGTCTCTAAGCTGGAGTTCCAACGAGTTTAGGATCTCTTCTTTCTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGTATATGGGCATATTCTaGATCACTGGGGTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMYMGIF*ITGVAS
Trigger: ACTGGCCACCCCAGTGATCCAGAATATGCCCATATA...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTTCTAAGGGGCTTCCCTaGCTGCTCTCTAAATCACGT +
Preference number: 4 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTSKGLP*LLSKSR
Trigger: ACGTGATTTAGAGAGCAGCCAGGGAAGCCCCTTAGA...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR TCA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCAGCAAAACACAAGAATaGCATCTGCTTTATTTGGAG +
Preference number: 4 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSSKTQE*HLLYLE
Trigger: CTCCAAATAAAGCAGATGTCATTCTTGTGTTTTGCT...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp CCTTTTTGGCAAAGTCAGCTATTAATGTGCGTTGTGCATTTAGTGTTGACTTTGGGAACCGGAAAGCATTaGATTGGAAGGTTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PFWQSQLLMCVVHLVLTLGTGKH*IGRLPC
Trigger: ACAGGGCAACCTTCCAATTCAATGCTTTCCGGTTCC...CAAAGTCAACACTAAATGCACAACGCACATTAATAGCTGACTTTGCCAAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp TCTCTTCAAAATGCTCAGCAGTACTTGGTTGGGTCTGCTAACCTTTTAAAGTTATCTCACTGTCGCAGATaGACGTCTCACAGTGTAACC +
Preference number: 4 (lower is better)
Translates to: SLQNAQQYLVGSANLLKLSHCRR*TSHSVT
Trigger: GGTTACACTGTGAGACGTTCATCTGCGACAGTGAGA...TAACTTTAAAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATTTTGAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp CCTTTTTGGCAAAGTCAGCTATTAATGTGCGTTGTGCATTTAGTGTTGACTTTGTCTCACTGTCGCAGATaGACGTCTCACAGTGTAACC +
Preference number: 4 (lower is better)
Translates to: PFWQSQLLMCVVHLVLTLSHCRR*TSHSVT
Trigger: GGTTACACTGTGAGACGTTCATCTGCGACAGTGAGA...CAAAGTCAACACTAAATGCACAACGCACATTAATAGCTGACTTTGCCAAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp CCTTTTTGGCAAAGTCAGCTATTAATGTGCGTTGTGCATTTAGTGTTGACTTTGGTGTTTGTCATTCGCTaGGGACTATTGTGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PFWQSQLLMCVVHLVLTLVFVIR*GLLWVE
Trigger: CTCCACCCACAATAGTCCTCAGCGAATGACAAACAC...CAAAGTCAACACTAAATGCACAACGCACATTAATAGCTGACTTTGCCAAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTATGACACTGCCTCAATaGCAAAGCTCCTTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFMTLPQ*QSSFLA
Trigger: TGCCAAAAAGGAGCTTTGTCATTGAGGCAGTGTCAT...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp AAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTTCAGAACCTGGTCTCTaGCAGGTATCCAAACCAAGC +
Preference number: 4 (lower is better)
Translates to: KMCYCMLSLAAFAFVFLISEPGL*QVSKPS
Trigger: GCTTGGTTTGGATACCTGGCAGAGACCAGGTTCTGA...AATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TCTCTTCAAAATGCTCAGCAGTACTTGGTTGGGTCTGCTAACCTTTTAAAGTTATCAGAACCTGGTCTCTaGCAGGTATCCAAACCAAGC +
Preference number: 4 (lower is better)
Translates to: SLQNAQQYLVGSANLLKLSEPGL*QVSKPS
Trigger: GCTTGGTTTGGATACCTGGCAGAGACCAGGTTCTGA...TAACTTTAAAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATTTTGAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTTTTTGCAGAGGCTTCTaGAAAGATGGCCAACAAGAC +
Preference number: 4 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFFCRGF*KDGQQD
Trigger: GTCTTGTTGGCCATCTTTGCAGAAGCCTCTGCAAAA...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGTTTTGCAGAGGCTTCTaGAAAGATGGCCAACAAGAC +
Preference number: 4 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKFCRGF*KDGQQD
Trigger: GTCTTGTTGGCCATCTTTGCAGAAGCCTCTGCAAAA...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGTGGAGCACACGATTTTaGAGAGGCTTCTGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMWSTRF*RGFCKD
Trigger: ATCTTTGCAGAAGCCTCTGCAAAATCGTGTGCTCCA...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTCTCAAATGTGCCCATaGTCCCGTTCTTCACGTGAA +
Preference number: 4 (lower is better)
Translates to: QDVLLHAFIGCICICVSDSQMCP*SRSSRE
Trigger: TTCACGTGAAGAACGGGAGCATGGGCACATTTGAGA...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TCTCTTCAAAATGCTCAGCAGTACTTGGTTGGGTCTGCTAACCTTTTAAAGTTAGTTGGCTCTCAAATGTaGCCATGCTCCCGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SLQNAQQYLVGSANLLKLVGSQM*PCSRSS
Trigger: TGAAGAACGGGAGCATGGGCACATTTGAGAGCCAAC...TAACTTTAAAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATTTTGAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TTACAGAAAGAAGAGATCCTAAACTCGTTGGAACTCCAGCTTAGAGACCAAGTCTTGATCAGCTGCCACTaGAAGGGATACATGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LQKEEILNSLELQLRDQVLISCH*KGYMKS
Trigger: TGACTTCATGTATCCCTTGCAGTGGCAGCTGATCAA...GACTTGGTCTCTAAGCTGGAGTTCCAACGAGTTTAGGATCTCTTCTTTCTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp AAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTTCTCTCCCATTCTCATaGACGAGGACGGTTTCATCC +
Preference number: 4 (lower is better)
Translates to: KMCYCMLSLAAFAFVFLISLPFS*TRTVSS
Trigger: GGATGAAACCGTCCTCGTGCATGAGAATGGGAGAGA...AATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTTTGCTTCTCAGAACCTaGTCTCTGCCAGGTATCCAA +
Preference number: 4 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTLLLRT*SLPGIQ
Trigger: TTGGATACCTGGCAGAGACCAGGTTCTGAGAAGCAA...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTAGGCTTCTGCAAAGATaGCCAACAAGACAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SYQDVLLHAFIGCICICVRLLQR*PTRQRP
Trigger: AGGCCTTTGTCTTGTTGGCCATCTTTGCAGAAGCCT...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAGAAGTGATAGATAGGTaGCTTGTACTCAGACTGGGT +
Preference number: 4 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGEVIDR*LVLRLG
Trigger: ACCCAGTCTGAGTACAAGCCACCTATCTATCACTTC...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTGAAGTGATAGATAGGTaGCTTGTACTCAGACTGGGT +
Preference number: 4 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFEVIDR*LVLRLG
Trigger: ACCCAGTCTGAGTACAAGCCACCTATCTATCACTTC...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGGAAGTGATAGATAGGTaGCTTGTACTCAGACTGGGT +
Preference number: 4 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKEVIDR*LVLRLG
Trigger: ACCCAGTCTGAGTACAAGCCACCTATCTATCACTTC...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp AAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTTCTTCACGTGAACAGTaGCCACTCTCTGGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: KMCYCMLSLAAFAFVFLISSREQ*PLSGQR
Trigger: CCTTTGACCAGAGAGTGGCCACTGTTCACGTGAAGA...AATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGAAGTTGAGAGACAGTTaGCTCTCAAATGTGCCCATG +
Preference number: 4 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMKLRDS*LSNVPM
Trigger: CATGGGCACATTTGAGAGCCAACTGTCTCTCAACTT...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp CCTTTTTGGCAAAGTCAGCTATTAATGTGCGTTGTGCATTTAGTGTTGACTTTGACACCTTGGAGAGTTTaGGGATGTTCTGGAACCGGA +
Preference number: 4 (lower is better)
Translates to: PFWQSQLLMCVVHLVLTLTPWRV*GCSGTG
Trigger: TCCGGTTCCAGAACATCCCCAAACTCTCCAAGGTGT...CAAAGTCAACACTAAATGCACAACGCACATTAATAGCTGACTTTGCCAAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTTTATCGCAGGTCACTaGGCAGGAGAGTTTCTCACT +
Preference number: 4 (lower is better)
Translates to: QDVLLHAFIGCICICVSDFIAGH*AGEFLT
Trigger: AGTGAGAAACTCTCCTGCCCAGTGACCTGCGATAAA...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATAGAAGCTATAGAGACTaGAAAATCCCCTGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: QDVLLHAFIGCICICVSDRSYRD*KIPCSA
Trigger: TGCGGAGCAGGGGATTTTCCAGTCTCTATAGCTTCT...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGATGCTCAGCAGTACTTaGTTGGGTCTGCTAACCTTT +
Preference number: 4 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMMLSST*LGLLTF
Trigger: AAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCAT...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTTATATGGGCATATTCTaGATCACTGGGGTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTYMGIF*ITGVAS
Trigger: ACTGGCCACCCCAGTGATCCAGAATATGCCCATATA...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAAGCGTCAATGACACATaGAGTTGTTCATGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGSVNDT*SCSCSR
Trigger: TCGGGAACATGAACAACTCCATGTGTCATTGACGCT...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TTACAGAAAGAAGAGATCCTAAACTCGTTGGAACTCCAGCTTAGAGACCAAGTCATCAGTGATGGTGCATaGTACTCTAGGGCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: LQKEEILNSLELQLRDQVISDGA*YSRAFS
Trigger: ACTGAAAGCCCTAGAGTACCATGCACCATCACTGAT...GACTTGGTCTCTAAGCTGGAGTTCCAACGAGTTTAGGATCTCTTCTTTCTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645243.1
CDS-3UTR CCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGAACATCATGATGAGGTaGTGGAGAACATCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMNIMMR*WRTSVD
Trigger: GTCCACAGATGTTCTCCACCACCTCATCATGATGTT...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
3UTR CAA 72 bp ATAGCATTGAGTGTCACAAGGCATTTATCTGTAGGATaGGGTCACCAAACTCACAGCACTTGTGTCATTGGA +
Preference number: 4 (lower is better)
Translates to: IALSVTRHLSVG*GHQTHSTCVIG
Trigger: TCCAATGACACAAGTGCTGTGAGTTTGGTGACCCAATCCTACAGATAAATGCCTTGTGACACTCAATGCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATAATTTACTGCAGCCCTaGCTTGAGTATGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: QDVLLHAFIGCICICVSDNLLQP*LEYGER
Trigger: CCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATT...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp AAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTTCCCATGTCATCAGTTaGAAGATTGGAACTCCCTGC +
Preference number: 4 (lower is better)
Translates to: KMCYCMLSLAAFAFVFLISHVIS*KIGTPC
Trigger: GCAGGGAGTTCCAATCTTTCAACTGATGACATGGGA...AATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp AAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTCGTTGGAAGCGTCAATaGCACATGGAGTTGTTCATG +
Preference number: 4 (lower is better)
Translates to: KMCYCMLSLAAFAFVFLIRWKRQ*HMELFM
Trigger: CATGAACAACTCCATGTGTCATTGACGCTTCCAACG...AATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTTTTGCAGAGGCTTCTaGAAAGATGGCCAACAAGAC +
Preference number: 4 (lower is better)
Translates to: SYQDVLLHAFIGCICICVFCRGF*KDGQQD
Trigger: GTCTTGTTGGCCATCTTTGCAGAAGCCTCTGCAAAA...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TTAGGTTTGAGCAAAACTATTGTATTCCACTCTGAATCCCACATCATCTCCCATTCTCAAATGTGCCCATaGTCCCGTTCTTCACGTGAA +
Preference number: 4 (lower is better)
Translates to: LGLSKTIVFHSESHIISHSQMCP*SRSSRE
Trigger: TTCACGTGAAGAACGGGAGCATGGGCACATTTGAGA...ATGGGAGATGATGTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTTTGATCAGCTGCCACTaGAAGGGATACATGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTLISCH*KGYMKS
Trigger: TGACTTCATGTATCCCTTGCAGTGGCAGCTGATCAA...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTTGATCAGCTGCCACTaGAAGGGATACATGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SYQDVLLHAFIGCICICVLISCH*KGYMKS
Trigger: TGACTTCATGTATCCCTTGCAGTGGCAGCTGATCAA...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTTGATCAGCTGCCACTaGAAGGGATACATGAAGTCA +
Preference number: 4 (lower is better)
Translates to: QDVLLHAFIGCICICVSDLISCH*KGYMKS
Trigger: TGACTTCATGTATCCCTTGCAGTGGCAGCTGATCAA...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TTACAGAAAGAAGAGATCCTAAACTCGTTGGAACTCCAGCTTAGAGACCAAGTCATTGAATTGGAAGGTTaGCCTGTGATCTCTCCCATT +
Preference number: 4 (lower is better)
Translates to: LQKEEILNSLELQLRDQVIELEG*PVISPI
Trigger: AATGGGAGAGATCACAGGGCAACCTTCCAATTCAAT...GACTTGGTCTCTAAGCTGGAGTTCCAACGAGTTTAGGATCTCTTCTTTCTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TTAGGTTTGAGCAAAACTATTGTATTCCACTCTGAATCCCACATCATCTCCCATCAAAGTGCTATTCTCTaGCCCCCAACAATGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LGLSKTIVFHSESHIISHQSAIL*PPTMWS
Trigger: AGACCACATTGTTGGGGGGCAGAGAATAGCACTTTG...ATGGGAGATGATGTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGATCACTGTGGTGTCATTaGAAACGATGTGACTGTAGA +
Preference number: 4 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGSLWCH*KRCDCR
Trigger: TCTACAGTCACATCGTTTCCAATGACACCACAGTGA...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTAAGTTGAGAGACAGTTaGCTCTCAAATGTGCCCATG +
Preference number: 4 (lower is better)
Translates to: SYQDVLLHAFIGCICICVKLRDS*LSNVPM
Trigger: CATGGGCACATTTGAGAGCCAACTGTCTCTCAACTT...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TCGATTTTGTTCATCCCTTGGGGATTCTGTAGCTCACATTTATCAGTACAAAGATTTATCGCAGGTCACTaGGCAGGAGAGTTTCTCACT +
Preference number: 4 (lower is better)
Translates to: SILFIPWGFCSSHLSVQRFIAGH*AGEFLT
Trigger: AGTGAGAAACTCTCCTGCCCAGTGACCTGCGATAAA...TCTTTGTACTGATAAATGTGAGCTACAGAATCCCCAAGGGATGAACAAAATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp CCTTTTTGGCAAAGTCAGCTATTAATGTGCGTTGTGCATTTAGTGTTGACTTTGAGAAGCTATAGAGACTaGAAAATCCCCTGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: PFWQSQLLMCVVHLVLTLRSYRD*KIPCSA
Trigger: TGCGGAGCAGGGGATTTTCCAGTCTCTATAGCTTCT...CAAAGTCAACACTAAATGCACAACGCACATTAATAGCTGACTTTGCCAAAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAAACATCATGATGAGGTaGTGGAGAACATCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGNIMMR*WRTSEK
Trigger: CTTCTCAGATGTTCTCCACCACCTCATCATGATGTT...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369422.4
ENST00000646139.2
CDS-3UTR CCA 90 bp CCTTTTTGGCAAAGTCAGCTATTAATGTGCGTTGTGCATTTAGTGTTGACTTTGTATATGGGCATATTCTaGATCACTGGGGTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: PFWQSQLLMCVVHLVLTLYMGIF*ITGVAS
Trigger: ACTGGCCACCCCAGTGATCCAGAATATGCCCATATA...CAAAGTCAACACTAAATGCACAACGCACATTAATAGCTGACTTTGCCAAAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TCTCTTCAAAATGCTCAGCAGTACTTGGTTGGGTCTGCTAACCTTTTAAAGTTAGGCTTTACTAAGACTTaGGGAAGTGAGGTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: SLQNAQQYLVGSANLLKLGFTKT*GSEVQF
Trigger: GAACTGGACCTCACTTCCCCAAGTCTTAGTAAAGCC...TAACTTTAAAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATTTTGAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR TCA 90 bp TTAGGTTTGAGCAAAACTATTGTATTCCACTCTGAATCCCACATCATCTCCCATAATTTACTGCAGCCCTaGCTTGAGTATGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LGLSKTIVFHSESHIISHNLLQP*LEYGER
Trigger: CCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATT...ATGGGAGATGATGTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTTCAGTACAAAGAACCTaGCAGATAAACCTAGGTTGT +
Preference number: 4 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFSVQRT*QINLGC
Trigger: ACAACCTAGGTTTATCTGTCAGGTTCTTTGTACTGA...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR GCA 90 bp TTAGGTTTGAGCAAAACTATTGTATTCCACTCTGAATCCCACATCATCTCCCATTTTTGCAGAGGCTTCTaGAAAGATGGCCAACAAGAC +
Preference number: 4 (lower is better)
Translates to: LGLSKTIVFHSESHIISHFCRGF*KDGQQD
Trigger: GTCTTGTTGGCCATCTTTGCAGAAGCCTCTGCAAAA...ATGGGAGATGATGTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGCACAAGAATGACATCTaGTTTATTTGGAGCACACGA +
Preference number: 4 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKHKNDI*FIWSTR
Trigger: TCGTGTGCTCCAAATAAAGCAGATGTCATTCTTGTG...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTATTGAATTGGAAGGTTaGCCTGTGATCTCTCCCATT +
Preference number: 4 (lower is better)
Translates to: SYQDVLLHAFIGCICICVIELEG*PVISPI
Trigger: AATGGGAGAGATCACAGGGCAACCTTCCAATTCAAT...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp AAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTAGTGAGGTCCAGTTCTaGTTCATCCGATTTACCTTC +
Preference number: 4 (lower is better)
Translates to: KMCYCMLSLAAFAFVFLISEVQF*FIRFTF
Trigger: GAAGGTAAATCGGATGAAGCAGAACTGGACCTCACT...AATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR GCA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTAAGGGGAGAGAATTTTaGATAAGGACTCTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFKGREF*IRTLVK
Trigger: TTTGACCAGAGTCCTTATGCAAAATTCTCTCCCCTT...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643850.1
CDS-3UTR CCA 90 bp TTAGGTTTGAGCAAAACTATTGTATTCCACTCTGAATCCCACATCATCTCCCATGAAGTGATAGATAGGTaGCTTGTACTCAGACTGGGT +
Preference number: 4 (lower is better)
Translates to: LGLSKTIVFHSESHIISHEVIDR*LVLRLG
Trigger: ACCCAGTCTGAGTACAAGCCACCTATCTATCACTTC...ATGGGAGATGATGTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TTAGGTTTGAGCAAAACTATTGTATTCCACTCTGAATCCCACATCATCTCCCATAAGTTGAGAGACAGTTaGCTCTCAAATGTGCCCATG +
Preference number: 4 (lower is better)
Translates to: LGLSKTIVFHSESHIISHKLRDS*LSNVPM
Trigger: CATGGGCACATTTGAGAGCCAACTGTCTCTCAACTT...ATGGGAGATGATGTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATAACATCATGATGAGGTaGTGGAGAACATCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: QDVLLHAFIGCICICVSDNIMMR*WRTSEK
Trigger: CTTCTCAGATGTTCTCCACCACCTCATCATGATGTT...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369422.4
ENST00000646139.2
CDS-3UTR CCA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATTGGAGTGCATATTTaGCAAAGTGCTATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKIGVHI*QSAILC
Trigger: GCAGAGAATAGCACTTTGCCAAATATGCACTCCAAT...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TTAGGTTTGAGCAAAACTATTGTATTCCACTCTGAATCCCACATCATCTCCCATATCAGTGATGGTGCATaGTACTCTAGGGCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: LGLSKTIVFHSESHIISHISDGA*YSRAFS
Trigger: ACTGAAAGCCCTAGAGTACCATGCACCATCACTGAT...ATGGGAGATGATGTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp AAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTAACATCATGATGAGGTaGTGGAGAACATCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: KMCYCMLSLAAFAFVFLINIMMR*WRTSVD
Trigger: GTCCACAGATGTTCTCCACCACCTCATCATGATGTT...AATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR TCA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGAGCAAAACACAAGAATaGCATCTGCTTTATTTGGAG +
Preference number: 4 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMSKTQE*HLLYLE
Trigger: CTCCAAATAAAGCAGATGTCATTCTTGTGTTTTGCT...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp TCGATTTTGTTCATCCCTTGGGGATTCTGTAGCTCACATTTATCAGTACAAAGATATTGTATTCCACTCTaGATCCCACATCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: SILFIPWGFCSSHLSVQRYCIPL*IPHHLP
Trigger: TGGGAGATGATGTGGGATTCAGAGTGGAATACAATA...TCTTTGTACTGATAAATGTGAGCTACAGAATCCCCAAGGGATGAACAAAATCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR TCA 90 bp TCTCTTCAAAATGCTCAGCAGTACTTGGTTGGGTCTGCTAACCTTTTAAAGTTATATTGTATTCCACTCTaGATCCCACATCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: SLQNAQQYLVGSANLLKLYCIPL*IPHHLP
Trigger: TGGGAGATGATGTGGGATTCAGAGTGGAATACAATA...TAACTTTAAAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATTTTGAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATCACAAGAATGACATCTaGTTTATTTGGAGCACACGA +
Preference number: 4 (lower is better)
Translates to: QDVLLHAFIGCICICVSDHKNDI*FIWSTR
Trigger: TCGTGTGCTCCAAATAAAGCAGATGTCATTCTTGTG...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TCTCTTCAAAATGCTCAGCAGTACTTGGTTGGGTCTGCTAACCTTTTAAAGTTAATTGAATTGGAAGGTTaGCCTGTGATCTCTCCCATT +
Preference number: 4 (lower is better)
Translates to: SLQNAQQYLVGSANLLKLIELEG*PVISPI
Trigger: AATGGGAGAGATCACAGGGCAACCTTCCAATTCAAT...TAACTTTAAAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATTTTGAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTTCAAAGGAATTTACTaGAGCCCTGACTTGAGTATG +
Preference number: 4 (lower is better)
Translates to: QDVLLHAFIGCICICVSDFKGIY*SPDLSM
Trigger: CATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAA...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGAGTCAGCTATTAATGTaGGTTGTGCATTTAGTGTTG +
Preference number: 4 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKSQLLM*VVHLVL
Trigger: CAACACTAAATGCACAACGCACATTAATAGCTGACT...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAAGTCAGCTATTAATGTaGGTTGTGCATTTAGTGTTG +
Preference number: 4 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGSQLLM*VVHLVL
Trigger: CAACACTAAATGCACAACGCACATTAATAGCTGACT...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAATCTCCTCATGTAGTTaGTTCCTTCTTATCATTCAG +
Preference number: 4 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGISSCS*FLLIIQ
Trigger: CTGAATGATAAGAAGGAAGCAACTACATGAGGAGAT...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp TTAGGTTTGAGCAAAACTATTGTATTCCACTCTGAATCCCACATCATCTCCCATTCACTGTGGTGTCATTaGAAACGATGTGACTGTAGA +
Preference number: 4 (lower is better)
Translates to: LGLSKTIVFHSESHIISHSLWCH*KRCDCR
Trigger: TCTACAGTCACATCGTTTCCAATGACACCACAGTGA...ATGGGAGATGATGTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp TCTCTTCAAAATGCTCAGCAGTACTTGGTTGGGTCTGCTAACCTTTTAAAGTTAAGTTTGGGGATGTTCTaGAACCGGAAAGCATTGAAT +
Preference number: 4 (lower is better)
Translates to: SLQNAQQYLVGSANLLKLSLGMF*NRKALN
Trigger: ATTCAATGCTTTCCGGTTCCAGAACATCCCCAAACT...TAACTTTAAAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATTTTGAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATACTGCATGCTTTCATTaGCTGCATTTGCATTTGTGT +
Preference number: 4 (lower is better)
Translates to: QDVLLHAFIGCICICVSDTACFH*LHLHLC
Trigger: ACACAAATGCAAATGCAGCCAATGAAAGCATGCAGT...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR CAA 72 bp TTTATCTGTAGGATTGGGTCACCAAACTCACAGCACTaGTGTCATTGGAGTCACTTTATAGTCATGTTTCCA +
Preference number: 4 (lower is better)
Translates to: FICRIGSPNSQH*CHWSHFIVMFP
Trigger: TGGAAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCCAATCCTACAGATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATAGCAAAACACAAGAATaGCATCTGCTTTATTTGGAG +
Preference number: 4 (lower is better)
Translates to: QDVLLHAFIGCICICVSDSKTQE*HLLYLE
Trigger: CTCCAAATAAAGCAGATGTCATTCTTGTGTTTTGCT...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp TTAGGTTTGAGCAAAACTATTGTATTCCACTCTGAATCCCACATCATCTCCCATTCAGTACAAAGAACCTaGCAGATAAACCTAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LGLSKTIVFHSESHIISHSVQRT*QINLGC
Trigger: ACAACCTAGGTTTATCTGTCAGGTTCTTTGTACTGA...ATGGGAGATGATGTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR GCA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATCATGCTTTCATTGGCTaGATTTGCATTTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: QDVLLHAFIGCICICVSDHAFIG*ICICVS
Trigger: AGAAACACAAATGCAAATGCAGCCAATGAAAGCATG...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTCATGCTTTCATTGGCTaGATTTGCATTTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTHAFIG*ICICVS
Trigger: AGAAACACAAATGCAAATGCAGCCAATGAAAGCATG...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTATCTCCTCATGTAGTTaGTTCCTTCTTATCATTCAG +
Preference number: 4 (lower is better)
Translates to: SYQDVLLHAFIGCICICVISSCS*FLLIIQ
Trigger: CTGAATGATAAGAAGGAAGCAACTACATGAGGAGAT...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp AAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTACTGCATGCTTTCATTaGCTGCATTTGCATTTGTGT +
Preference number: 4 (lower is better)
Translates to: KMCYCMLSLAAFAFVFLITACFH*LHLHLC
Trigger: ACACAAATGCAAATGCAGCCAATGAAAGCATGCAGT...AATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR TCA 90 bp TTAGGTTTGAGCAAAACTATTGTATTCCACTCTGAATCCCACATCATCTCCCATAGCAAAACACAAGAATaGCATCTGCTTTATTTGGAG +
Preference number: 4 (lower is better)
Translates to: LGLSKTIVFHSESHIISHSKTQE*HLLYLE
Trigger: CTCCAAATAAAGCAGATGTCATTCTTGTGTTTTGCT...ATGGGAGATGATGTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR GCA 90 bp TCGATTTTGTTCATCCCTTGGGGATTCTGTAGCTCACATTTATCAGTACAAAGACATGCTTTCATTGGCTaGATTTGCATTTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SILFIPWGFCSSHLSVQRHAFIG*ICICVS
Trigger: AGAAACACAAATGCAAATGCAGCCAATGAAAGCATG...TCTTTGTACTGATAAATGTGAGCTACAGAATCCCCAAGGGATGAACAAAATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CCA 90 bp TTAGGTTTGAGCAAAACTATTGTATTCCACTCTGAATCCCACATCATCTCCCATGACAAAGCTCCTTTTTaGCAAAGTCAGCTATTAATG +
Preference number: 4 (lower is better)
Translates to: LGLSKTIVFHSESHIISHDKAPF*QSQLLM
Trigger: CATTAATAGCTGACTTTGCCAAAAAGGAGCTTTGTC...ATGGGAGATGATGTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
3UTR CAA 72 bp GGCTTTCAAGAATCTATTTCCTTTATATCATTAGGTTaGAGCAAAACTATTGTATTCCACTCTGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: GFQESISFISLG*SKTIVFHSESH
Trigger: GTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAATGATATAAAGGAAATAGATTCTTGAAAGCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TGGGTCTTAGCTGAAATGTTTCTTCCTCTAAGGGGCTTCCCTGGCTGCTCTCTATCAGAGGGAGACCTCTaGATCTCGCCCCCTCTGCGC +
Preference number: 5 (lower is better)
Translates to: WVLAEMFLPLRGFPGCSLSEGDL*ISPPLR
Trigger: GCGCAGAGGGGGCGAGATCAAGAGGTCTCCCTCTGA...TAGAGAGCAGCCAGGGAAGCCCCTTAGAGGAAGAAACATTTCAGCTAAGACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CAA 90 bp GCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCCACAAGACCAGTTAGGCCTTCGTCACCATaGCTTCTCAGAACCTGGTCT +
Preference number: 5 (lower is better)
Translates to: AREGALSVLFTAVATRPVRPSSP*LLRTWS
Trigger: AGACCAGGTTCTGAGAAGCAATGGTGACGAAGGCCT...AACTGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CAA 90 bp TCTACACATATTGGCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCGCAAGGGAAGGGGCCTaGTCTGTCTTGTTCACGGCA +
Preference number: 5 (lower is better)
Translates to: STHIGKGRGLVCLVHGSSAREGA*SVLFTA
Trigger: TGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGC...GCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGCCAATATGTGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS TCA 90 bp GGGATGTTCTGGAACCGGAAAGCATTGAATTGGAAGGTTGCCCTGTaGTCTCTCCCATTCTCATGCACGAGGACGGTTTCATCCGTGGGG +
Preference number: 5 (lower is better)
Translates to: GMFWNRKALNWKVAL*SLPFSCTRTVSSVG
Trigger: CCCCACGGATGAAACCGTCCTCGTGCATGAGAATGGGAGAGATCACAGGGCAACCTTCCAATTCAATGCTTTCCGGTTCCAGAACATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp GGCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCCACAAGACCAGTCTCCCATGTCATCAGTaGAAAGATTGGAACTCCCTG +
Preference number: 5 (lower is better)
Translates to: GKGRGLVCLVHGSSHKTSLPCHQ*KDWNSL
Trigger: CAGGGAGTTCCAATCTTTCAACTGATGACATGGGAG...ACTGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS GCA 90 bp GGCTTCTGCAAAGATGGCCAACAAGACAAAGGCCTTCGTCACCATTaGTTCTCAGAACCTGGTCTCTGCCAGGTATCCAAACCAAGCTGG +
Preference number: 5 (lower is better)
Translates to: GFCKDGQQDKGLRHH*FSEPGLCQVSKPSW
Trigger: CCAGCTTGGTTTGGATACCTGGCAGAGACCAGGTTCTGAGAAGCAATGGTGACGAAGGCCTTTGTCTTGTTGGCCATCTTTGCAGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS CCA 90 bp CCAGGGCCTGAGCCTCGATCATTCGTTGGAAGCGTCAATGACACATaGAGTTGTTCATGTTCCCGACTGTTTCATCCTCTCCGGACTGTA +
Preference number: 5 (lower is better)
Translates to: PGPEPRSFVGSVNDT*SCSCSRLFHPLRTV
Trigger: TACAGTCCGGAGAGGATGAAACAGTCGGGAACATGAACAACTCCATGTGTCATTGACGCTTCCAACGAATGATCGAGGCTCAGGCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000646139.2
CDS-3UTR CAA 90 bp GGGAGGGAGATGGCACTCAGAGACAGTTCTACAAGGGTAAAGCCAACTCAACAGACCCTGACTGGGTGTTaGCTGTTTGCTGGGCATTGT +
Preference number: 5 (lower is better)
Translates to: GREMALRDSSTRVKPTQQTLTGC*LFAGHC
Trigger: ACAATGCCCAGCAAACAGCAAACACCCAGTCAGGGT...CTGTTGAGTTGGCTTTACCCTTGTAGAACTGTCTCTGAGTGCCATCTCCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS TCA 90 bp GTTTATCGCAGGTCACTGGGCAGGAGAGTTTCTCACTGTCGCAGATaGACGTCTCACAGTGTAACCACACCTTGGAGAGTTTGGGGATGT +
Preference number: 5 (lower is better)
Translates to: VYRRSLGRRVSHCRR*TSHSVTTPWRVWGC
Trigger: ACATCCCCAAACTCTCCAAGGTGTGGTTACACTGTGAGACGTTCATCTGCGACAGTGAGAAACTCTCCTGCCCAGTGACCTGCGATAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS GCA 90 bp CAAGACAAAGGCCTTCGTCACCATTGCTTCTCAGAACCTGGTCTCTaGCAGGTATCCAAACCAAGCTGGCCAAATGTTTACGGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: QDKGLRHHCFSEPGL*QVSKPSWPNVYGPS
Trigger: GGAAGGACCGTAAACATTTGGCCAGCTTGGTTTGGATACCTGGCAGAGACCAGGTTCTGAGAAGCAATGGTGACGAAGGCCTTTGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS CCA 90 bp TGGCCAACAAGACAAAGGCCTTCGTCACCATTGCTTCTCAGAACCTaGTCTCTGCCAGGTATCCAAACCAAGCTGGCCAAATGTTTACGG +
Preference number: 5 (lower is better)
Translates to: WPTRQRPSSPLLLRT*SLPGIQTKLAKCLR
Trigger: CCGTAAACATTTGGCCAGCTTGGTTTGGATACCTGGCAGAGACCAGGTTCTGAGAAGCAATGGTGACGAAGGCCTTTGTCTTGTTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGTCCGTGGGGCAGCCCTaGTTGATCAGCTGCCACTGC +
Preference number: 5 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMSVGQP*LISCHC
Trigger: GCAGTGGCAGCTGATCAACAAGGGCTGCCCCACGGA...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGTCCGTGGGGCAGCCCTaGTTGATCAGCTGCCACTGC +
Preference number: 5 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKSVGQP*LISCHC
Trigger: GCAGTGGCAGCTGATCAACAAGGGCTGCCCCACGGA...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp ATGTTTCTTCCTCTAAGGGGCTTCCCTGGCTGCTCTCTAAATCACGTCCCCCATCCGGAAAGCATTGAATaGGAAGGTTGCCCTGTGATC +
Preference number: 5 (lower is better)
Translates to: MFLPLRGFPGCSLNHVPHPESIE*EGCPVI
Trigger: GATCACAGGGCAACCTTCCAATTCAATGCTTTCCGG...ATGGGGGACGTGATTTAGAGAGCAGCCAGGGAAGCCCCTTAGAGGAAGAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CAA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCCACACCTTGGAGAGTTaGGGGATGTTCTGGAACCGG +
Preference number: 5 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSHTLES*GMFWNR
Trigger: CCGGTTCCAGAACATCCCCAAACTCTCCAAGGTGTG...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp CATCTCCCATGTCATCAGTTGAAAGATTGGAACTCCCTGCGTGGGGGCTCAGCTAATGCTCAGCAGTACTaGGTTGGGTCTGCTAACCTT +
Preference number: 5 (lower is better)
Translates to: HLPCHQLKDWNSLRGGSANAQQY*VGSANL
Trigger: AAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATT...AGCTGAGCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGACATGGGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp CATCTCCCATGTCATCAGTTGAAAGATTGGAACTCCCTGCGTGGGGGCTCAGCTAGCCTCGATCATTCGTaGGAAGCGTCAATGACACAT +
Preference number: 5 (lower is better)
Translates to: HLPCHQLKDWNSLRGGSASLDHS*EASMTH
Trigger: ATGTGTCATTGACGCTTCCAACGAATGATCGAGGCT...AGCTGAGCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGACATGGGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp GCAAGGGAAGGGGCCTTGTCTGTCTTGTTCACGGCAGTAGCCACAAGACCAGTTAAATCACGTCCCCCATaGAACCCCAAATACTCTACA +
Preference number: 5 (lower is better)
Translates to: AREGALSVLFTAVATRPVKSRPP*NPKYST
Trigger: TGTAGAGTATTTGGGGTTCAATGGGGGACGTGATTT...AACTGGTCTTGTGGCTACTGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS TCA 90 bp ACCACACCTTGGAGAGTTTGGGGATGTTCTGGAACCGGAAAGCATTaGATTGGAAGGTTGCCCTGTGATCTCTCCCATTCTCATGCACGA +
Preference number: 5 (lower is better)
Translates to: TTPWRVWGCSGTGKH*IGRLPCDLSHSHAR
Trigger: TCGTGCATGAGAATGGGAGAGATCACAGGGCAACCTTCCAATTCAATGCTTTCCGGTTCCAGAACATCCCCAAACTCTCCAAGGTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS GCA 90 bp GAGTTTGGGGATGTTCTGGAACCGGAAAGCATTGAATTGGAAGGTTaGCCTGTGATCTCTCCCATTCTCATGCACGAGGACGGTTTCATC +
Preference number: 5 (lower is better)
Translates to: EFGDVLEPESIELEG*PVISPILMHEDGFI
Trigger: GATGAAACCGTCCTCGTGCATGAGAATGGGAGAGATCACAGGGCAACCTTCCAATTCAATGCTTTCCGGTTCCAGAACATCCCCAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCAGGCCTTCGTCACCATaGCTTCTCAGAACCTGGTCT +
Preference number: 5 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSRPSSP*LLRTWS
Trigger: AGACCAGGTTCTGAGAAGCAATGGTGACGAAGGCCT...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp CATCTCCCATGTCATCAGTTGAAAGATTGGAACTCCCTGCGTGGGGGCTCAGCTATCTGGGATCACAAATaGGTAGTAACCTCCTTCGTG +
Preference number: 5 (lower is better)
Translates to: HLPCHQLKDWNSLRGGSAIWDHK*VVTSFV
Trigger: CACGAAGGAGGTTACTACCAATTTGTGATCCCAGAT...AGCTGAGCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGACATGGGAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTTCCGTGGGGCAGCCCTaGTTGATCAGCTGCCACTGC +
Preference number: 5 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTSVGQP*LISCHC
Trigger: GCAGTGGCAGCTGATCAACAAGGGCTGCCCCACGGA...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TGGGTCTTAGCTGAAATGTTTCTTCCTCTAAGGGGCTTCCCTGGCTGCTCTCTACCGGAAAGCATTGAATaGGAAGGTTGCCCTGTGATC +
Preference number: 5 (lower is better)
Translates to: WVLAEMFLPLRGFPGCSLPESIE*EGCPVI
Trigger: GATCACAGGGCAACCTTCCAATTCAATGCTTTCCGG...TAGAGAGCAGCCAGGGAAGCCCCTTAGAGGAAGAAACATTTCAGCTAAGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CAA 90 bp TGGGTCTTAGCTGAAATGTTTCTTCCTCTAAGGGGCTTCCCTGGCTGCTCTCTATGGAACCGGAAAGCATaGAATTGGAAGGTTGCCCTG +
Preference number: 5 (lower is better)
Translates to: WVLAEMFLPLRGFPGCSLWNRKA*NWKVAL
Trigger: CAGGGCAACCTTCCAATTCAATGCTTTCCGGTTCCA...TAGAGAGCAGCCAGGGAAGCCCCTTAGAGGAAGAAACATTTCAGCTAAGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CAA 90 bp CATCTCCCATGTCATCAGTTGAAAGATTGGAACTCCCTGCGTGGGGGCTCAGCTAAATCACGTCCCCCATaGAACCCCAAATACTCTACA +
Preference number: 5 (lower is better)
Translates to: HLPCHQLKDWNSLRGGSAKSRPP*NPKYST
Trigger: TGTAGAGTATTTGGGGTTCAATGGGGGACGTGATTT...AGCTGAGCCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGACATGGGAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CAA 90 bp AATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAGGAGCGGCAGCTGGACACTCGGGGATTTaGGTGATGATGGTTTTGGGA +
Preference number: 5 (lower is better)
Translates to: NKCVCHSLRTIVGGGAAAGHSGI*VMMVLG
Trigger: TCCCAAAACCATCATCACCAAAATCCCCGAGTGTCC...AGCTGCCGCTCCTCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TCTGGGGATGGCTTTACTAAGACTTGGGGAAGTGAGGTCCAGTTCTGCTTCATCCTAATGCTTAACCCTTaGGCTTCCACTCCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: SGDGFTKTWGSEVQFCFILMLNP*ASTPAN
Trigger: GTTTGCAGGAGTGGAAGCCAAAGGGTTAAGCATTAG...GATGAAGCAGAACTGGACCTCACTTCCCCAAGTCTTAGTAAAGCCATCCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CAA 90 bp AAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTTCCGTGGGGCAGCCCTaGTTGATCAGCTGCCACTGC +
Preference number: 5 (lower is better)
Translates to: KMCYCMLSLAAFAFVFLISVGQP*LISCHC
Trigger: GCAGTGGCAGCTGATCAACAAGGGCTGCCCCACGGA...AATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp GCTTTCAAAGGAATTTACTGCAGCCCTGACTTGAGTATGGAGAAAGGAGGCTCCCAGTGTAACCACACCTaGGAGAGTTTGGGGATGTTC +
Preference number: 5 (lower is better)
Translates to: AFKGIYCSPDLSMEKGGSQCNHT*ESLGMF
Trigger: GAACATCCCCAAACTCTCCAAGGTGTGGTTACACTG...GGAGCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTAAATTCCTTTGAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TCTGGGGATGGCTTTACTAAGACTTGGGGAAGTGAGGTCCAGTTCTGCTTCATCAATGCTCAGCAGTACTaGGTTGGGTCTGCTAACCTT +
Preference number: 5 (lower is better)
Translates to: SGDGFTKTWGSEVQFCFINAQQY*VGSANL
Trigger: AAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATT...GATGAAGCAGAACTGGACCTCACTTCCCCAAGTCTTAGTAAAGCCATCCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CAA 90 bp TTACTAAGACTTGGGGAAGTGAGGTCCAGTTCTGCTTCATCCGATTTACCTTCGTCATCAGTTGAAAGATaGGAACTCCCTGCGTGGGGG +
Preference number: 5 (lower is better)
Translates to: LLRLGEVRSSSASSDLPSSSVER*ELPAWG
Trigger: CCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGA...CGAAGGTAAATCGGATGAAGCAGAACTGGACCTCACTTCCCCAAGTCTTAGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CAA 90 bp CCTTTTTGGCAAAGTCAGCTATTAATGTGCGTTGTGCATTTAGTGTTGACTTTGTCAGAGGGAGACCTCTaGATCTCGCCCCCTCTGCGC +
Preference number: 5 (lower is better)
Translates to: PFWQSQLLMCVVHLVLTLSEGDL*ISPPLR
Trigger: GCGCAGAGGGGGCGAGATCAAGAGGTCTCCCTCTGA...CAAAGTCAACACTAAATGCACAACGCACATTAATAGCTGACTTTGCCAAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CAA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAGCAAGGGAAGGGGCCTaGTCTGTCTTGTTCACGGCA +
Preference number: 5 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGAREGA*SVLFTA
Trigger: TGCCGTGAACAAGACAGACAAGGCCCCTTCCCTTGC...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CAA 90 bp TCTGGGGATGGCTTTACTAAGACTTGGGGAAGTGAGGTCCAGTTCTGCTTCATCATCTGGGATCACAAATaGGTAGTAACCTCCTTCGTG +
Preference number: 5 (lower is better)
Translates to: SGDGFTKTWGSEVQFCFIIWDHK*VVTSFV
Trigger: CACGAAGGAGGTTACTACCAATTTGTGATCCCAGAT...GATGAAGCAGAACTGGACCTCACTTCCCCAAGTCTTAGTAAAGCCATCCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CAA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGCACACCTTGGAGAGTTaGGGGATGTTCTGGAACCGG +
Preference number: 5 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKHTLES*GMFWNR
Trigger: CCGGTTCCAGAACATCCCCAAACTCTCCAAGGTGTG...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTCACACCTTGGAGAGTTaGGGGATGTTCTGGAACCGG +
Preference number: 5 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFHTLES*GMFWNR
Trigger: CCGGTTCCAGAACATCCCCAAACTCTCCAAGGTGTG...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp ATGTTTCTTCCTCTAAGGGGCTTCCCTGGCTGCTCTCTAAATCACGTCCCCCATAATGTGGTCTTCTGTTaGTTCTTTTTGGCAGCACAA +
Preference number: 5 (lower is better)
Translates to: MFLPLRGFPGCSLNHVPHNVVFC*FFLAAQ
Trigger: TTGTGCTGCCAAAAAGAACAAACAGAAGACCACATT...ATGGGGGACGTGATTTAGAGAGCAGCCAGGGAAGCCCCTTAGAGGAAGAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CAA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTTACTGCAGCCCTGACTaGAGTATGGAGAAAGGAGGC +
Preference number: 5 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFYCSPD*SMEKGG
Trigger: GCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTA...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TGGGTCTTAGCTGAAATGTTTCTTCCTCTAAGGGGCTTCCCTGGCTGCTCTCTATACTGCATGCTTTCATaGGCTGCATTTGCATTTGTG +
Preference number: 5 (lower is better)
Translates to: WVLAEMFLPLRGFPGCSLYCMLS*AAFAFV
Trigger: CACAAATGCAAATGCAGCCAATGAAAGCATGCAGTA...TAGAGAGCAGCCAGGGAAGCCCCTTAGAGGAAGAAACATTTCAGCTAAGACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CAA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGACCGGAAAGCATTGAATaGGAAGGTTGCCCTGTGATC +
Preference number: 5 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGPESIE*EGCPVI
Trigger: GATCACAGGGCAACCTTCCAATTCAATGCTTTCCGG...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGCCGGAAAGCATTGAATaGGAAGGTTGCCCTGTGATC +
Preference number: 5 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMPESIE*EGCPVI
Trigger: GATCACAGGGCAACCTTCCAATTCAATGCTTTCCGG...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGTGGAACCGGAAAGCATaGAATTGGAAGGTTGCCCTG +
Preference number: 5 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKWNRKA*NWKVAL
Trigger: CAGGGCAACCTTCCAATTCAATGCTTTCCGGTTCCA...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp AAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGATGTGGAACCGGAAAGCATaGAATTGGAAGGTTGCCCTG +
Preference number: 5 (lower is better)
Translates to: KSFIWAYSGSLGWPVTKMWNRKA*NWKVAL
Trigger: CAGGGCAACCTTCCAATTCAATGCTTTCCGGTTCCA...CATCTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp AAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTCACACCTTGGAGAGTTaGGGGATGTTCTGGAACCGG +
Preference number: 5 (lower is better)
Translates to: KMCYCMLSLAAFAFVFLIHTLES*GMFWNR
Trigger: CCGGTTCCAGAACATCCCCAAACTCTCCAAGGTGTG...AATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TGTAAATCATTTATATGGGCATATTCTGGATCACTGGGGTGGCCAGTTACCAAGCAGTGTAACCACACCTaGGAGAGTTTGGGGATGTTC +
Preference number: 5 (lower is better)
Translates to: CKSFIWAYSGSLGWPVTKQCNHT*ESLGMF
Trigger: GAACATCCCCAAACTCTCCAAGGTGTGGTTACACTG...CTTGGTAACTGGCCACCCCAGTGATCCAGAATATGCCCATATAAATGATTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTTACTGCAGCCCTGACTaGAGTATGGAGAAAGGAGGC +
Preference number: 5 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTYCSPD*SMEKGG
Trigger: GCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTA...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTACTGCAGCCCTGACTaGAGTATGGAGAAAGGAGGC +
Preference number: 5 (lower is better)
Translates to: QDVLLHAFIGCICICVSDYCSPD*SMEKGG
Trigger: GCCTCCTTTCTCCATACTCAAGTCAGGGCTGCAGTA...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTTCATCAGTTGAAAGATaGGAACTCCCTGCGTGGGGG +
Preference number: 5 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTSSVER*ELPAWG
Trigger: CCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGA...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCATCAGTTGAAAGATaGGAACTCCCTGCGTGGGGG +
Preference number: 5 (lower is better)
Translates to: SYQDVLLHAFIGCICICVSSVER*ELPAWG
Trigger: CCCCCACGCAGGGAGTTCCAATCTTTCAACTGATGA...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TTAGGTTTGAGCAAAACTATTGTATTCCACTCTGAATCCCACATCATCTCCCATAGGCCTTCGTCACCATaGCTTCTCAGAACCTGGTCT +
Preference number: 5 (lower is better)
Translates to: LGLSKTIVFHSESHIISHRPSSP*LLRTWS
Trigger: AGACCAGGTTCTGAGAAGCAATGGTGACGAAGGCCT...ATGGGAGATGATGTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TCTCTTCAAAATGCTCAGCAGTACTTGGTTGGGTCTGCTAACCTTTTAAAGTTAAGGCCTTCGTCACCATaGCTTCTCAGAACCTGGTCT +
Preference number: 5 (lower is better)
Translates to: SLQNAQQYLVGSANLLKLRPSSP*LLRTWS
Trigger: AGACCAGGTTCTGAGAAGCAATGGTGACGAAGGCCT...TAACTTTAAAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATTTTGAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTGAAGTTGAGAGACAGTaGGCTCTCAAATGTGCCCAT +
Preference number: 5 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFEVERQ*ALKCAH
Trigger: ATGGGCACATTTGAGAGCCAACTGTCTCTCAACTTC...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGACTAATGCTTAACCCTTaGGCTTCCACTCCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGLMLNP*ASTPAN
Trigger: GTTTGCAGGAGTGGAAGCCAAAGGGTTAAGCATTAG...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATCAGTGTAACCACACCTaGGAGAGTTTGGGGATGTTC +
Preference number: 5 (lower is better)
Translates to: QDVLLHAFIGCICICVSDQCNHT*ESLGMF
Trigger: GAACATCCCCAAACTCTCCAAGGTGTGGTTACACTG...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp AATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAGGAGCGGCAGCTTATTGGAGTGCATATTaGGCAAAGTGCTATTCTCTG +
Preference number: 5 (lower is better)
Translates to: NKCVCHSLRTIVGGGAAAYWSAY*AKCYSL
Trigger: CAGAGAATAGCACTTTGCCAAATATGCACTCCAATA...AGCTGCCGCTCCTCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TTACAGAAAGAAGAGATCCTAAACTCGTTGGAACTCCAGCTTAGAGACCAAGTCCTCCCATGTCATCAGTaGAAAGATTGGAACTCCCTG +
Preference number: 5 (lower is better)
Translates to: LQKEEILNSLELQLRDQVLPCHQ*KDWNSL
Trigger: CAGGGAGTTCCAATCTTTCAACTGATGACATGGGAG...GACTTGGTCTCTAAGCTGGAGTTCCAACGAGTTTAGGATCTCTTCTTTCTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTAGCCTCGATCATTCGTaGGAAGCGTCAATGACACAT +
Preference number: 5 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFSLDHS*EASMTH
Trigger: ATGTGTCATTGACGCTTCCAACGAATGATCGAGGCT...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp AAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTACCCTGACTGGGTGTTaGCTGTTTGCTGGGCATTGT +
Preference number: 5 (lower is better)
Translates to: KMCYCMLSLAAFAFVFLITLTGC*LFAGHC
Trigger: ACAATGCCCAGCAAACAGCAAACACCCAGTCAGGGT...AATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CAA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTAATACTCTACACATATaGGCAAGGGAAGGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFNTLHI*AREGAL
Trigger: CAAGGCCCCTTCCCTTGCCAATATGTGTAGAGTATT...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CAA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTATCTGGGATCACAAATaGGTAGTAACCTCCTTCGTG +
Preference number: 5 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFIWDHK*VVTSFV
Trigger: CACGAAGGAGGTTACTACCAATTTGTGATCCCAGAT...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTGAAGTTGAGAGACAGTaGGCTCTCAAATGTGCCCAT +
Preference number: 5 (lower is better)
Translates to: SYQDVLLHAFIGCICICVEVERQ*ALKCAH
Trigger: ATGGGCACATTTGAGAGCCAACTGTCTCTCAACTTC...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TTAGGTTTGAGCAAAACTATTGTATTCCACTCTGAATCCCACATCATCTCCCATTGGAACCGGAAAGCATaGAATTGGAAGGTTGCCCTG +
Preference number: 5 (lower is better)
Translates to: LGLSKTIVFHSESHIISHWNRKA*NWKVAL
Trigger: CAGGGCAACCTTCCAATTCAATGCTTTCCGGTTCCA...ATGGGAGATGATGTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp CCTTTTTGGCAAAGTCAGCTATTAATGTGCGTTGTGCATTTAGTGTTGACTTTGCAGTGTAACCACACCTaGGAGAGTTTGGGGATGTTC +
Preference number: 5 (lower is better)
Translates to: PFWQSQLLMCVVHLVLTLQCNHT*ESLGMF
Trigger: GAACATCCCCAAACTCTCCAAGGTGTGGTTACACTG...CAAAGTCAACACTAAATGCACAACGCACATTAATAGCTGACTTTGCCAAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTAATACTCTACACATATaGGCAAGGGAAGGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTNTLHI*AREGAL
Trigger: CAAGGCCCCTTCCCTTGCCAATATGTGTAGAGTATT...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CAA 90 bp AAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTGAAGTTGAGAGACAGTaGGCTCTCAAATGTGCCCAT +
Preference number: 5 (lower is better)
Translates to: KMCYCMLSLAAFAFVFLIEVERQ*ALKCAH
Trigger: ATGGGCACATTTGAGAGCCAACTGTCTCTCAACTTC...AATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TCGATTTTGTTCATCCCTTGGGGATTCTGTAGCTCACATTTATCAGTACAAAGAGAAGTTGAGAGACAGTaGGCTCTCAAATGTGCCCAT +
Preference number: 5 (lower is better)
Translates to: SILFIPWGFCSSHLSVQREVERQ*ALKCAH
Trigger: ATGGGCACATTTGAGAGCCAACTGTCTCTCAACTTC...TCTTTGTACTGATAAATGTGAGCTACAGAATCCCCAAGGGATGAACAAAATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CAA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTAAGGGAGCTTCTTTCTaGATGGAGAACTTGGCATTA +
Preference number: 5 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFKGASF*MENLAL
Trigger: TAATGCCAAGTTCTCCATCAAGAAAGAAGCTCCCTT...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TTAGGTTTGAGCAAAACTATTGTATTCCACTCTGAATCCCACATCATCTCCCATCTAATGCTTAACCCTTaGGCTTCCACTCCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: LGLSKTIVFHSESHIISHLMLNP*ASTPAN
Trigger: GTTTGCAGGAGTGGAAGCCAAAGGGTTAAGCATTAG...ATGGGAGATGATGTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TTAGGTTTGAGCAAAACTATTGTATTCCACTCTGAATCCCACATCATCTCCCATAATGCTCAGCAGTACTaGGTTGGGTCTGCTAACCTT +
Preference number: 5 (lower is better)
Translates to: LGLSKTIVFHSESHIISHNAQQY*VGSANL
Trigger: AAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATT...ATGGGAGATGATGTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp AAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTCTCCCATGTCATCAGTaGAAAGATTGGAACTCCCTG +
Preference number: 5 (lower is better)
Translates to: KMCYCMLSLAAFAFVFLILPCHQ*KDWNSL
Trigger: CAGGGAGTTCCAATCTTTCAACTGATGACATGGGAG...AATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTCCAAACTCACAGCACTaGTGTCATTGGAGTCACTTT +
Preference number: 5 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTPNSQH*CHWSHF
Trigger: AAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGG...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTCCAAACTCACAGCACTaGTGTCATTGGAGTCACTTT +
Preference number: 5 (lower is better)
Translates to: SYQDVLLHAFIGCICICVPNSQH*CHWSHF
Trigger: AAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGG...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TTACAGAAAGAAGAGATCCTAAACTCGTTGGAACTCCAGCTTAGAGACCAAGTCCTGACAGCAAAGGATTaGAACATGGCTATGAGTATG +
Preference number: 5 (lower is better)
Translates to: LQKEEILNSLELQLRDQVLTAKD*NMAMSM
Trigger: CATACTCATAGCCATGTTCAAATCCTTTGCTGTCAG...GACTTGGTCTCTAAGCTGGAGTTCCAACGAGTTTAGGATCTCTTCTTTCTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTCTGACAGCAAAGGATTaGAACATGGCTATGAGTATG +
Preference number: 5 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFLTAKD*NMAMSM
Trigger: CATACTCATAGCCATGTTCAAATCCTTTGCTGTCAG...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TCTCTTCAAAATGCTCAGCAGTACTTGGTTGGGTCTGCTAACCTTTTAAAGTTAATCTGGGATCACAAATaGGTAGTAACCTCCTTCGTG +
Preference number: 5 (lower is better)
Translates to: SLQNAQQYLVGSANLLKLIWDHK*VVTSFV
Trigger: CACGAAGGAGGTTACTACCAATTTGTGATCCCAGAT...TAACTTTAAAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATTTTGAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp AGTTACCAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTAAGGGAGCTTCTTTCTaGATGGAGAACTTGGCATTA +
Preference number: 5 (lower is better)
Translates to: SYQDVLLHAFIGCICICVKGASF*MENLAL
Trigger: TAATGCCAAGTTCTCCATCAAGAAAGAAGCTCCCTT...AACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTGGTAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTAAGGGAGCTTCTTTCTaGATGGAGAACTTGGCATTA +
Preference number: 5 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTKGASF*MENLAL
Trigger: TAATGCCAAGTTCTCCATCAAGAAAGAAGCTCCCTT...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTAATGTGGTCTTCTGTTaGTTCTTTTTGGCAGCACAA +
Preference number: 5 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFNVVFC*FFLAAQ
Trigger: TTGTGCTGCCAAAAAGAACAAACAGAAGACCACATT...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TTTTGGCAGCACAATAAATGTGTTTGTCATTCGCTGAGGACTATTGTGGGTGGAAATGTGGTCTTCTGTTaGTTCTTTTTGGCAGCACAA +
Preference number: 5 (lower is better)
Translates to: FWQHNKCVCHSLRTIVGGNVVFC*FFLAAQ
Trigger: TTGTGCTGCCAAAAAGAACAAACAGAAGACCACATT...TCCACCCACAATAGTCCTCAGCGAATGACAAACACATTTATTGTGCTGCCAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp GGGTCACCAAACTCACAGCACTTGTGTCATTGGAGTCACTTTATAGTCATGTTTTATTGGAGTGCATATTaGGCAAAGTGCTATTCTCTG +
Preference number: 5 (lower is better)
Translates to: GSPNSQHLCHWSHFIVMFYWSAY*AKCYSL
Trigger: CAGAGAATAGCACTTTGCCAAATATGCACTCCAATA...AAACATGACTATAAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGGTGACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TCGATTTTGTTCATCCCTTGGGGATTCTGTAGCTCACATTTATCAGTACAAAGACCAAACTCACAGCACTaGTGTCATTGGAGTCACTTT +
Preference number: 5 (lower is better)
Translates to: SILFIPWGFCSSHLSVQRPNSQH*CHWSHF
Trigger: AAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGG...TCTTTGTACTGATAAATGTGAGCTACAGAATCCCCAAGGGATGAACAAAATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CAA 90 bp CCTTTTTGGCAAAGTCAGCTATTAATGTGCGTTGTGCATTTAGTGTTGACTTTGCCAAACTCACAGCACTaGTGTCATTGGAGTCACTTT +
Preference number: 5 (lower is better)
Translates to: PFWQSQLLMCVVHLVLTLPNSQH*CHWSHF
Trigger: AAAGTGACTCCAATGACACAAGTGCTGTGAGTTTGG...CAAAGTCAACACTAAATGCACAACGCACATTAATAGCTGACTTTGCCAAAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp CAAGATGTGCTACTGCATGCTTTCATTGGCTGCATTTGCATTTGTGTTTCTGATTACTGCATGCTTTCATaGGCTGCATTTGCATTTGTG +
Preference number: 5 (lower is better)
Translates to: QDVLLHAFIGCICICVSDYCMLS*AAFAFV
Trigger: CACAAATGCAAATGCAGCCAATGAAAGCATGCAGTA...ATCAGAAACACAAATGCAAATGCAGCCAATGAAAGCATGCAGTAGCACATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp AGTGTTGACTTTGTAGTTGCACCCTACATTCTCTTCAAAATGCTCAGCAGTACTCTGACAGCAAAGGATTaGAACATGGCTATGAGTATG +
Preference number: 5 (lower is better)
Translates to: SVDFVVAPYILFKMLSSTLTAKD*NMAMSM
Trigger: CATACTCATAGCCATGTTCAAATCCTTTGCTGTCAG...AGTACTGCTGAGCATTTTGAAGAGAATGTAGGGTGCAACTACAAAGTCAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369422.4
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TTAGGTTTGAGCAAAACTATTGTATTCCACTCTGAATCCCACATCATCTCCCATTACTGCATGCTTTCATaGGCTGCATTTGCATTTGTG +
Preference number: 5 (lower is better)
Translates to: LGLSKTIVFHSESHIISHYCMLS*AAFAFV
Trigger: CACAAATGCAAATGCAGCCAATGAAAGCATGCAGTA...ATGGGAGATGATGTGGGATTCAGAGTGGAATACAATAGTTTTGCTCAAACCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS-3UTR CAA 90 bp TCGATTTTGTTCATCCCTTGGGGATTCTGTAGCTCACATTTATCAGTACAAAGATACTGCATGCTTTCATaGGCTGCATTTGCATTTGTG +
Preference number: 5 (lower is better)
Translates to: SILFIPWGFCSSHLSVQRYCMLS*AAFAFV
Trigger: CACAAATGCAAATGCAGCCAATGAAAGCATGCAGTA...TCTTTGTACTGATAAATGTGAGCTACAGAATCCCCAAGGGATGAACAAAATCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS-3UTR CAA 90 bp TCTCTTCAAAATGCTCAGCAGTACTTGGTTGGGTCTGCTAACCTTTTAAAGTTATATTGGAGTGCATATTaGGCAAAGTGCTATTCTCTG +
Preference number: 5 (lower is better)
Translates to: SLQNAQQYLVGSANLLKLYWSAY*AKCYSL
Trigger: CAGAGAATAGCACTTTGCCAAATATGCACTCCAATA...TAACTTTAAAAGGTTAGCAGACCCAACCAAGTACTGCTGAGCATTTTGAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS GCA 72 bp TCATCCGTGGGGCAGCCCTTGTTGATCAGCTGCCACTaGAAGGGATACATGAAGTCAGCCGAGGGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: SSVGQPLLISCH*KGYMKSAEGVA
Trigger: GGCCACCCCCTCGGCTGACTTCATGTATCCCTTGCAGTGGCAGCTGATCAACAAGGGCTGCCCCACGGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS CAA 72 bp TCTTCAGAGTTCAGGGGCTGGTCAGAGGGAGACCTCTaGATCTCGCCCCCTCTGCGCCACTCAGGTGTGCTG +
Preference number: 6 (lower is better)
Translates to: SSEFRGWSEGDL*ISPPLRHSGVL
Trigger: CAGCACACCTGAGTGGCGCAGAGGGGGCGAGATCAAGAGGTCTCCCTCTGACCAGCCCCTGAACTCTGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS CAA 90 bp TCCTCCCTCTCTTCAGAGTTCAGGGGCTGGTCAGAGGGAGACCTCTaGATCTCGCCCCCTCTGCGCCACTCAGGTGTGCTGAGAAGCTAT +
Preference number: 6 (lower is better)
Translates to: SSLSSEFRGWSEGDL*ISPPLRHSGVLRSY
Trigger: ATAGCTTCTCAGCACACCTGAGTGGCGCAGAGGGGGCGAGATCAAGAGGTCTCCCTCTGACCAGCCCCTGAACTCTGAAGAGAGGGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643850.1
ENST00000645243.1
CDS GCA 72 bp ACGGTTTCATCCGTGGGGCAGCCCTTGTTGATCAGCTaGCACTGCAAGGGATACATGAAGTCAGCCGAGGGG +
Preference number: 6 (lower is better)
Translates to: TVSSVGQPLLIS*HCKGYMKSAEG
Trigger: CCCCTCGGCTGACTTCATGTATCCCTTGCAGTGGCAGCTGATCAACAAGGGCTGCCCCACGGATGAAACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS CAA 90 bp CACCTTGGAGAGTTTGGGGATGTTCTGGAACCGGAAAGCATTGAATaGGAAGGTTGCCCTGTGATCTCTCCCATTCTCATGCACGAGGAC +
Preference number: 6 (lower is better)
Translates to: HLGEFGDVLEPESIE*EGCPVISPILMHED
Trigger: GTCCTCGTGCATGAGAATGGGAGAGATCACAGGGCAACCTTCCAATTCAATGCTTTCCGGTTCCAGAACATCCCCAAACTCTCCAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS TCA 72 bp AGGTCACTGGGCAGGAGAGTTTCTCACTGTCGCAGATaGACGTCTCACAGTGTAACCACACCTTGGAGAGTT +
Preference number: 6 (lower is better)
Translates to: RSLGRRVSHCRR*TSHSVTTPWRV
Trigger: AACTCTCCAAGGTGTGGTTACACTGTGAGACGTTCATCTGCGACAGTGAGAAACTCTCCTGCCCAGTGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS GCA 72 bp GGCCTTCGTCACCATTGCTTCTCAGAACCTGGTCTCTaGCAGGTATCCAAACCAAGCTGGCCAAATGTTTAC +
Preference number: 6 (lower is better)
Translates to: GLRHHCFSEPGL*QVSKPSWPNVY
Trigger: GTAAACATTTGGCCAGCTTGGTTTGGATACCTGGCAGAGACCAGGTTCTGAGAAGCAATGGTGACGAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS CCA 72 bp AGACAAAGGCCTTCGTCACCATTGCTTCTCAGAACCTaGTCTCTGCCAGGTATCCAAACCAAGCTGGCCAAA +
Preference number: 6 (lower is better)
Translates to: RQRPSSPLLLRT*SLPGIQTKLAK
Trigger: TTTGGCCAGCTTGGTTTGGATACCTGGCAGAGACCAGGTTCTGAGAAGCAATGGTGACGAAGGCCTTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS CAA 72 bp CTGTCGCAGATGAACGTCTCACAGTGTAACCACACCTaGGAGAGTTTGGGGATGTTCTGGAACCGGAAAGCA +
Preference number: 6 (lower is better)
Translates to: LSQMNVSQCNHT*ESLGMFWNRKA
Trigger: TGCTTTCCGGTTCCAGAACATCCCCAAACTCTCCAAGGTGTGGTTACACTGTGAGACGTTCATCTGCGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS CAA 90 bp CTGTCGCAGATGAACGTCTCACAGTGTAACCACACCTTGGAGAGTTaGGGGATGTTCTGGAACCGGAAAGCATTGAATTGGAAGGTTGCC +
Preference number: 6 (lower is better)
Translates to: LSQMNVSQCNHTLES*GMFWNRKALNWKVA
Trigger: GGCAACCTTCCAATTCAATGCTTTCCGGTTCCAGAACATCCCCAAACTCTCCAAGGTGTGGTTACACTGTGAGACGTTCATCTGCGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS TCA 72 bp TGGAACCGGAAAGCATTGAATTGGAAGGTTGCCCTGTaGTCTCTCCCATTCTCATGCACGAGGACGGTTTCA +
Preference number: 6 (lower is better)
Translates to: WNRKALNWKVAL*SLPFSCTRTVS
Trigger: TGAAACCGTCCTCGTGCATGAGAATGGGAGAGATCACAGGGCAACCTTCCAATTCAATGCTTTCCGGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS TCA 72 bp TGGCTCTCAAATGTGCCCATGCTCCCGTTCTTCACGTaGACAGTGGCCACTCTGAAAAGGGGAGAGAATTTT +
Preference number: 6 (lower is better)
Translates to: WLSNVPMLPFFT*TVATLKRGENF
Trigger: AAAATTCTCTCCCCTTTTCAGAGTGGCCACTGTTCACGTGAAGAACGGGAGCATGGGCACATTTGAGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643850.1
CDS GCA 72 bp GATGTTCTGGAACCGGAAAGCATTGAATTGGAAGGTTaGCCTGTGATCTCTCCCATTCTCATGCACGAGGAC +
Preference number: 6 (lower is better)
Translates to: DVLEPESIELEG*PVISPILMHED
Trigger: GTCCTCGTGCATGAGAATGGGAGAGATCACAGGGCAACCTTCCAATTCAATGCTTTCCGGTTCCAGAACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS CCA 72 bp CAGTGTAACCACACCTTGGAGAGTTTGGGGATGTTCTaGAACCGGAAAGCATTGAATTGGAAGGTTGCCCTG +
Preference number: 6 (lower is better)
Translates to: QCNHTLESLGMF*NRKALNWKVAL
Trigger: CAGGGCAACCTTCCAATTCAATGCTTTCCGGTTCCAGAACATCCCCAAACTCTCCAAGGTGTGGTTACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS TCA 72 bp TGGAGAGTTTGGGGATGTTCTGGAACCGGAAAGCATTaGATTGGAAGGTTGCCCTGTGATCTCTCCCATTCT +
Preference number: 6 (lower is better)
Translates to: WRVWGCSGTGKH*IGRLPCDLSHS
Trigger: AGAATGGGAGAGATCACAGGGCAACCTTCCAATTCAATGCTTTCCGGTTCCAGAACATCCCCAAACTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS CCA 72 bp TTGGAGCACACGATTTTGCAGAGGCTTCTGCAAAGATaGCCAACAAGACAAAGGCCTTCGTCACCATTGCTT +
Preference number: 6 (lower is better)
Translates to: LEHTILQRLLQR*PTRQRPSSPLL
Trigger: AAGCAATGGTGACGAAGGCCTTTGTCTTGTTGGCCATCTTTGCAGAAGCCTCTGCAAAATCGTGTGCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS CCA 72 bp GAGCCTCGATCATTCGTTGGAAGCGTCAATGACACATaGAGTTGTTCATGTTCCCGACTGTTTCATCCTCTC +
Preference number: 6 (lower is better)
Translates to: EPRSFVGSVNDT*SCSCSRLFHPL
Trigger: GAGAGGATGAAACAGTCGGGAACATGAACAACTCCATGTGTCATTGACGCTTCCAACGAATGATCGAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS CAA 72 bp GGAGAACTTGGCATTAGTGTAGAAGTTGAGAGACAGTaGGCTCTCAAATGTGCCCATGCTCCCGTTCTTCAC +
Preference number: 6 (lower is better)
Translates to: GELGISVEVERQ*ALKCAHAPVLH
Trigger: GTGAAGAACGGGAGCATGGGCACATTTGAGAGCCAACTGTCTCTCAACTTCTACACTAATGCCAAGTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS CAA 90 bp AGTTTCTCACTGTCGCAGATGAACGTCTCACAGTGTAACCACACCTaGGAGAGTTTGGGGATGTTCTGGAACCGGAAAGCATTGAATTGG +
Preference number: 6 (lower is better)
Translates to: SFSLSQMNVSQCNHT*ESLGMFWNRKALNW
Trigger: CCAATTCAATGCTTTCCGGTTCCAGAACATCCCCAAACTCTCCAAGGTGTGGTTACACTGTGAGACGTTCATCTGCGACAGTGAGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS CAA 72 bp ATGAACGTCTCACAGTGTAACCACACCTTGGAGAGTTaGGGGATGTTCTGGAACCGGAAAGCATTGAATTGG +
Preference number: 6 (lower is better)
Translates to: MNVSQCNHTLES*GMFWNRKALNW
Trigger: CCAATTCAATGCTTTCCGGTTCCAGAACATCCCCAAACTCTCCAAGGTGTGGTTACACTGTGAGACGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2
CDS CAA 90 bp TTTCTTGATGGAGAACTTGGCATTAGTGTAGAAGTTGAGAGACAGTaGGCTCTCAAATGTGCCCATGCTCCCGTTCTTCACGTGAACAGT +
Preference number: 6 (lower is better)
Translates to: FLDGELGISVEVERQ*ALKCAHAPVLHVNS
Trigger: ACTGTTCACGTGAAGAACGGGAGCATGGGCACATTTGAGAGCCAACTGTCTCTCAACTTCTACACTAATGCCAAGTTCTCCATCAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369422.4
ENST00000643850.1
ENST00000645243.1
ENST00000646139.2