RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TECTA (Homo sapiens)

Ensembl gene IDs: ENSG00000109927

Ensembl transcript IDs: ENST00000264037.2, ENST00000392793.6, ENST00000478058.1, ENST00000642222.1, ENST00000645008.1, ENST00000646278.1

Found 1089 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGGTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTaGAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGT +
Preference number: 1 (lower is better)
Translates to: PGQQYPQWPKLPWQG*RTQWVEKRLIDRTR
Trigger: ACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR CCA 90 bp CATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTaGACCATTGGAGGCAGGTGGCATCATTTTGAGATGCTGGACACT +
Preference number: 1 (lower is better)
Translates to: HTLKEELGWSLVSGP*TIGGRWHHFEMLDT
Trigger: AGTGTCCAGCATCTCAAAATGATGCCACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR TCA 90 bp GCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTGGCATCATTTTaGGATGCTGGACACTTTCAAATAGGTTTTGACTTAAGGGCACAC +
Preference number: 1 (lower is better)
Translates to: AGFWTLDHWRQVASF*DAGHFQIGFDLRAH
Trigger: GTGTGCCCTTAAGTCAAAACCTATTTGAAAGTGTCCAGCATCTCAAAATGATGCCACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR CCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCATGGTCGCTGGTTTCTaGACCTTGGACCATTGGAGG +
Preference number: 2 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSMVAGF*TLDHWR
Trigger: CCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCAT...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR CCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAAGCTTGGATGGTCGCTaGTTTCTGGACCTTGGACCA +
Preference number: 2 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASSLDGR*FLDLGP
Trigger: TGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCT...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR CAA 90 bp CCCAGGTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTaGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACG +
Preference number: 2 (lower is better)
Translates to: PRSTISPVAKAAMAR*KDTVGGEAPHRQNT
Trigger: CGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGACCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR CCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCTGGACCTTGGACCATTaGAGGCAGGTGGCATCATTT +
Preference number: 2 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSWTLDH*RQVASF
Trigger: AAATGATGCCACCTGCCTCCAATGGTCCAAGGTCCA...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR CCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGCTTGGATGGTCGCTaGTTTCTGGACCTTGGACCA +
Preference number: 2 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHSLDGR*FLDLGP
Trigger: TGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCT...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR CCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCATGGTCGCTGGTTTCTaGACCTTGGACCATTGGAGG +
Preference number: 2 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCMVAGF*TLDHWR
Trigger: CCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCAT...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR TCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCCAGGTGGCATCATTTTaGGATGCTGGACACTTTCAA +
Preference number: 2 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSQVASF*DAGHFQ
Trigger: TTGAAAGTGTCCAGCATCTCAAAATGATGCCACCTG...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR TCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCACAGGTGGCATCATTTTaGGATGCTGGACACTTTCAA +
Preference number: 2 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASQVASF*DAGHFQ
Trigger: TTGAAAGTGTCCAGCATCTCAAAATGATGCCACCTG...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR TCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAGAAATAGCACTGGCTTaGCAGATTTCTCTGGTCAGA +
Preference number: 2 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASEIALA*QISLVR
Trigger: TCTGACCAGAGAAATCTGTCAAGCCAGTGCTATTTC...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR CCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGATACTTTCCATAACTaGCTTGTAGAAGCCCCGTTT +
Preference number: 2 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSDTFHN*LVEAPF
Trigger: AAACGGGGCTTCTACAAGCCAGTTATGGAAAGTATC...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR CCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATGATACTTTCCATAACTaGCTTGTAGAAGCCCCGTTT +
Preference number: 2 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHDTFHN*LVEAPF
Trigger: AAACGGGGCTTCTACAAGCCAGTTATGGAAAGTATC...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR TCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCCTTTCAAATAGGTTTTaGCTTAAGGGCACACACTTT +
Preference number: 2 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSLSNRF*LKGTHF
Trigger: AAAGTGTGTGCCCTTAAGTCAAAACCTATTTGAAAG...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR CCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGAGCTTGGATGGTCGCTaGTTTCTGGACCTTGGACCA +
Preference number: 2 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQSLDGR*FLDLGP
Trigger: TGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCT...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR CCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCCTAGTGACAACTGTTTaGGAATTTTACACAAGAGAG +
Preference number: 2 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSLVTTV*EFYTRE
Trigger: CTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAG...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR CCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCTGAAAGAGGAGCTTaGATGGTCGCTGGTTTCTGG +
Preference number: 2 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQSERGA*MVAGFW
Trigger: CCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGA...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR TCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCCAGGTGGCATCATTTTaGGATGCTGGACACTTTCAA +
Preference number: 2 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLQVASF*DAGHFQ
Trigger: TTGAAAGTGTCCAGCATCTCAAAATGATGCCACCTG...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR TCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCCCGTTTCATACTCTaGAAGAGGAGCTTGGATGGT +
Preference number: 2 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGPRFIL*KRSLDG
Trigger: ACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGGG...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR CCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTACCATTGGAGGCAGGTaGCATCATTTTGAGATGCTG +
Preference number: 2 (lower is better)
Translates to: RESNLPVITSKSFQQALSTIGGR*HHFEML
Trigger: CAGCATCTCAAAATGATGCCACCTGCCTCCAATGGT...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR TCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTGAAATAGCACTGGCTTaGCAGATTTCTCTGGTCAGA +
Preference number: 2 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPEIALA*QISLVR
Trigger: TCTGACCAGAGAAATCTGTCAAGCCAGTGCTATTTC...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR TCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCACCCCGTTTCATACTCTaGAAGAGGAGCTTGGATGGT +
Preference number: 2 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPPRFIL*KRSLDG
Trigger: ACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGGG...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR TCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTGAAATAGCACTGGCTTaGCAGATTTCTCTGGTCAGA +
Preference number: 2 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPEIALA*QISLVR
Trigger: TCTGACCAGAGAAATCTGTCAAGCCAGTGCTATTTC...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR CCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCATGGACCTTGGACCATTaGAGGCAGGTGGCATCATTT +
Preference number: 2 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPWTLDH*RQVASF
Trigger: AAATGATGCCACCTGCCTCCAATGGTCCAAGGTCCA...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR CCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTCTAGTGACAACTGTTTaGGAATTTTACACAAGAGAG +
Preference number: 2 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSLVTTV*EFYTRE
Trigger: CTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAG...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR TCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTTACTGGTTTTTCATGTaGACCAAAGTCTCTAGTGAC +
Preference number: 2 (lower is better)
Translates to: RESNLPVITSKSFQQALSYWFFM*TKVSSD
Trigger: GTCACTAGAGACTTTGGTTCACATGAAAAACCAGTA...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR GCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTGGCATCATTTTGAGATaGTGGACACTTTCAAATAGG +
Preference number: 2 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPGIILR*WTLSNR
Trigger: CCTATTTGAAAGTGTCCAGCATCTCAAAATGATGCC...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR CCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTCTAGTGACAACTGTTTaGGAATTTTACACAAGAGAG +
Preference number: 2 (lower is better)
Translates to: RESNLPVITSKSFQQALSLVTTV*EFYTRE
Trigger: CTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAG...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR TCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAATACTGGTTTTTCATGTaGACCAAAGTCTCTAGTGAC +
Preference number: 2 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQYWFFM*TKVSSD
Trigger: GTCACTAGAGACTTTGGTTCACATGAAAAACCAGTA...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR GCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAGGCATCATTTTGAGATaGTGGACACTTTCAAATAGG +
Preference number: 2 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPGIILR*WTLSNR
Trigger: CCTATTTGAAAGTGTCCAGCATCTCAAAATGATGCC...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR TCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCACTTTCAAATAGGTTTTaGCTTAAGGGCACACACTTT +
Preference number: 2 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPLSNRF*LKGTHF
Trigger: AAAGTGTGTGCCCTTAAGTCAAAACCTATTTGAAAG...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR TCA 72 bp CAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTaGAGGACACAGTGGGTGGAGAAGCGCCTCATAGAC +
Preference number: 3 (lower is better)
Translates to: QYPQWPKLPWQG*RTQWVEKRLID
Trigger: GTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR CAA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGCTGGTTTCTGGACCTaGGACCATTGGAGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSAGFWT*DHWRQV
Trigger: CACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGC...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR CCA 72 bp TACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTaGACCTTGGACCATTGGAGGCAGGTGGCATCATTT +
Preference number: 3 (lower is better)
Translates to: YSERGAWMVAGF*TLDHWRQVASF
Trigger: AAATGATGCCACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR CCA 72 bp TGTAGAAGCCCCGTTTCATACTCTGAAAGAGGAGCTTaGATGGTCGCTGGTTTCTGGACCTTGGACCATTGG +
Preference number: 3 (lower is better)
Translates to: CRSPVSYSERGA*MVAGFWTLDHW
Trigger: CCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGGGCTTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR CAA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGCAGGTGGCATCATTTaGAGATGCTGGACACTTTCA +
Preference number: 3 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGAGGII*RCWTLS
Trigger: TGAAAGTGTCCAGCATCTCAAAATGATGCCACCTGC...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR CAA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCTCTAGTGACAACTGTTaGGGAATTTTACACAAGAGA +
Preference number: 3 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSSSDNC*GILHKR
Trigger: TCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGA...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR CAA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATTCTAGTGACAACTGTTaGGGAATTTTACACAAGAGA +
Preference number: 3 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHSSDNC*GILHKR
Trigger: TCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGA...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR-3UTR CAA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGTCTAGTGACAACTGTTaGGGAATTTTACACAAGAGA +
Preference number: 3 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWSSDNC*GILHKR
Trigger: TCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGA...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR TCA 72 bp TGGACCTTGGACCATTGGAGGCAGGTGGCATCATTTTaGGATGCTGGACACTTTCAAATAGGTTTTGACTTA +
Preference number: 3 (lower is better)
Translates to: WTLDHWRQVASF*DAGHFQIGFDL
Trigger: TAAGTCAAAACCTATTTGAAAGTGTCCAGCATCTCAAAATGATGCCACCTGCCTCCAATGGTCCAAGGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR CCA 72 bp TTGGGAATTTTACACAAGAGAGATACTTTCCATAACTaGCTTGTAGAAGCCCCGTTTCATACTCTGAAAGAG +
Preference number: 3 (lower is better)
Translates to: LGILHKRDTFHN*LVEAPFHTLKE
Trigger: CTCTTTCAGAGTATGAAACGGGGCTTCTACAAGCCAGTTATGGAAAGTATCTCTCTTGTGTAAAATTCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAAGGCGCCGTCGAAGGTaGGGAAGACGCCGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASRRRRR*GRRRRR
Trigger: CCGGCGGCGGCGTCTTCCGCACCTTCGACGGCGCCT...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCACACTCTTCAGGCGGATaGCGGCGCAGCGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASHSSGG*RRSGAG
Trigger: GCCAGCCCCGCTGCGCCGCCATCCGCCTGAAGAGTG...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCACGTAGCCTGAGACGATaGAGGAGGCGTCGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASRSLRR*RRRRCG
Trigger: CCCGCACCGACGCCTCCTGCATCGTCTCAGGCTACG...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCCCTCTGTGCACGGCGTaGCGCAGTTCCGCGAGGCCG +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCPLCTA*RSSARP
Trigger: CGGCCTCGCGGAACTGCGCCACGCCGTGCACAGAGG...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGGCGGCGCAGCGGGGCTaGCAGACACTCACGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWAAQRG*QTLTQL
Trigger: GAGCTGCGTGAGTGTCTGCCAGCCCCGCTGCGCCGC...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTCACTCTTCAGGCGGATaGCGGCGCAGCGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGHSSGG*RRSGAG
Trigger: GCCAGCCCCGCTGCGCCGCCATCCGCCTGAAGAGTG...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCTCGCAGCCGCACTTGTaGAGAGGGACGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSSQPHL*RGTHWL
Trigger: CAGCCAGTGCGTCCCTCTGCACAAGTGCGGCTGCGA...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGTTCTGCAGCCAGCTaGAGGCGGTCTGCACCGCGC +
Preference number: 4 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHSSAAS*RRSAPR
Trigger: GCGCGGTGCAGACCGCCTGCAGCTGGCTGCAGAACT...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGATCTCGGGGGTTCTTaGCCCCGGGAGGCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSDLGGS*PREAEE
Trigger: TTCTTCAGCCTCCCGGGGTCAAGAACCCCCGAGATC...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATGCCGCAGGTCTTGTTaGAGCAGTAGACGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASCRRSC*SSRRPR
Trigger: GCGGGGACGTCTACTGCTTCAACAAGACCTGCGGCA...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCACCACGTCCGCATTCTTaGAGGCGCTTGCATACCGGG +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASPRPHS*RRLHTG
Trigger: CCCGGTATGCAAGCGCCTGCAAGAATGCGGACGTGG...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTGGGCCAGCACCACGCTaGTTACCACCGGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGGPAPR*LPPASL
Trigger: GAGGGAAGCCGGTGGTAAGCAGCGTGGTGCTGGCCC...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCAGGCTCTGCAGCTCTTaGCGTCCTCCTGCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSRLCSS*RPPAGF
Trigger: GAACCCTGCAGGAGGACGGCAAGAGCTGCAGAGCCT...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAAGTAGAGGGCTTCAGTaGCAGCGTCGCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASSRGLQ*QRRTGC
Trigger: GCACCCAGTGCGACGCTGCCACTGAAGCCCTCTACT...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGCGGCGCAGCGGGGCTaGCAGACACTCACGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLAAQRG*QTLTQL
Trigger: GAGCTGCGTGAGTGTCTGCCAGCCCCGCTGCGCCGC...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCACACCCAGGAGACGGCTaGACCTCTGCGGTGTTCATT +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASHPGDG*TSAVFI
Trigger: AATGAACACCGCAGAGGTTCAGCCGTCTCCTGGGTG...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATGCGGTAATAGGCAGTaGCGTTCACCACCCCATGGC +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASCGNRQ*RSPPHG
Trigger: GCCATGGGGTGGTGAACGTCACTGCCTATTACCGCA...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCGTAGTGGCCGTAGCCTaGGACGATGCAGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCVVAVA*DDAGGV
Trigger: GACGCCTCCTGCATCGTCTCAGGCTACGGCCACTAC...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCGTCACCGTAATCCCCTaGGTCTGGCAGGTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCVTVIP*VWQVLA
Trigger: CGCCAGCACCTGCCAGACTCAGGGGATTACGGTGAC...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCTGCAGCTCTTGCCGTTaGGGACGTAGCCAGCGTCGC +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCCSSCR*GRSQRR
Trigger: GCGACGCTGGCTACGTCCTCAACGGCAAGAGCTGCA...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCCTTGGCAGAGGAGCGTaGCATTGTCCCTCACACTGC +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSLGRGA*HCPSHC
Trigger: GCAGTGTGAGGGACAATGGCACGCTCCTCTGCCAAG...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTGGACGAAGCCCTGGTTaGACTCGCAGCCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGGRSPG*TRSPLC
Trigger: GCACAGAGGGCTGCGAGTGCAACCAGGGCTTCGTCC...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTCAGCTGCAGGCGGTCTaGACCGCGCCCCCATCGATG +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSQLQAV*TAPPSM
Trigger: CATCGATGGGGGCGCGGTGCAGACCGCCTGCAGCTG...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCCGCACTGAATCACGTTaGGACGGAAACAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSRTESR*DGNSGS
Trigger: GCTGCCGCTGTTTCCGTCGCAACGTGATTCAGTGCG...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATACCTCTGCAGCTCTTaGCGTCCTCCTGCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASYLCSS*RPPAGF
Trigger: GAACCCTGCAGGAGGACGGCAAGAGCTGCAGAGGTA...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645008.1
CDS-3UTR CCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTACACGGTCTCCCGCTTaGGGAAGCAGCCCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGTRSPA*GSSPGS
Trigger: GCTACCAGGGCTGCTTCCCCAAGCGGGAGACCGTGT...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGGTGCACAGGATGAGTaGGCAGCTGGTCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSGAQDE*AAGLEV
Trigger: GACTTCCAGACCAGCTGCCCACTCATCCTGTGCACC...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAGAGAAGGCAGCGTTCTaGTTGGGGATCAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASEKAAF*LGIRLH
Trigger: GTGCAGCCTGATCCCCAACCAGAACGCTGCCTTCTC...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCAGTTTCTGGCAGATaGTGGACAGCACGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSAVSGR*WTARRR
Trigger: GCGCCTTCGTGCTGTCCACCATCTGCCAGAAACTGC...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCACACGGAGTAGTGGCTaGAGCTCGGGCACTGCACTG +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCTRSSG*SSGTAL
Trigger: CAGTGCAGTGCCCGAGCTTCAGCCACTACTCCGTGT...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGCACCTGGTTCTGGCTaGGCAGGCACACGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGAPGSG*AGTRSP
Trigger: GGGAGACCGTGTGCCTGCTCAGCCAGAACCAGGTGC...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATGGAAGCCATCAAAGGTaGGGTAGTGGCCGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHGSHQR*GSGRSL
Trigger: CAGGCTACGGCCACTACCTCACCTTTGATGGCTTCC...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCTGGCGCGGGTCGCACTaGATCACGTTGCGACGGAAA +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCWRGSH*ITLRRK
Trigger: TTTCCGTCGCAACGTGATTCAGTGCGACCCGCGCCA...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGTGGCGCGGGTCGCACTaGATCACGTTGCGACGGAAA +
Preference number: 4 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWWRGSH*ITLRRK
Trigger: TTTCCGTCGCAACGTGATTCAGTGCGACCCGCGCCA...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAAGGAGGTCTTGGTGCTaGAGCAGCCGCGCACCCCGT +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGRRSWC*SSRAPR
Trigger: ACGGGGTGCGCGGCTGCTTCAGCACCAAGACCTCCT...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGAGGAGGTCTTGGTGCTaGAGCAGCCGCGCACCCCGT +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLRRSWC*SSRAPR
Trigger: ACGGGGTGCGCGGCTGCTTCAGCACCAAGACCTCCT...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAAGCCCTTCATGTCGGTaGGCTTCAGGCAGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASSPSCR*ASGSSH
Trigger: ATGGCTACTGCCTGAAGCTCACCGACATGAAGGGCT...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATCAAACACCACGCATGTaGTGGTCTCCACAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHQTPRM*WSPQRC
Trigger: GCAGCGCTGTGGAGACCAGCACATGCGTGGTGTTTG...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTCAGCGTCGCACTGGGTaGAGTTGTCGACGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSQRRTG*SCRRSR
Trigger: CCGGCTGCGTCGACAACTGCACCCAGTGCGACGCTG...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATCTGAAGCTCGGGCACTaGACTGTGGACACACACCCA +
Preference number: 4 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHLKLGH*TVDTHP
Trigger: TGGGTGTGTGTCCACAGTGCAGTGCCCGAGCTTCAG...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAATGTGTCGGGGCAGCTaGTTGTGCACACGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASMCRGS*LCTRSS
Trigger: ACTACTCCGTGTGCACAAGCAGCTGCCCCGACACAT...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGGTTGTCCGTGCACTTaGCGTTGGGGAGACAGAACT +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSGCPCT*RWGDRT
Trigger: AGTTCTGTCTCCCCAACGGCAAGTGCACGGACAACC...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTCCTGAGTCTGGCAGGTaGTGGCGTAGTTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGPESGR*WRSSAA
Trigger: GGCTGCAGAACTACGCCAGCACCTGCCAGACTCAGG...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGCGGCAGCGCCGCGTaGAGTCGCTGTTCCAAAATA +
Preference number: 4 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHSGSAA*SRCSKI
Trigger: TATTTTGGAACAGCGACTGCACGCGGCGCTGCCGCT...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTAGGCGCCGTCGAAGGTaGGGAAGACGCCGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPRRRRR*GRRRRR
Trigger: CCGGCGGCGGCGTCTTCCGCACCTTCGACGGCGCCT...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCTTCCTGTTACACAGCTaGAGAGAGGCCCATCCACCC +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSFLLHS*REAHPP
Trigger: GGGTGGATGGGCCTCTCTGCAGCTGTGTAACAGGAA...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCCTCTTGCCGTCCTCCTaGAGGGTTCCTGTTACACAG +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSLLPSS*RVPVTQ
Trigger: CTGTGTAACAGGAACCCTGCAGGAGGACGGCAAGAG...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCAGGCTCTGCAGCTCTTaGCGTCCTCCTGCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCRLCSS*RPPAGF
Trigger: GAACCCTGCAGGAGGACGGCAAGAGCTGCAGAGCCT...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCGAGCATAGGCCTGGATaGCTTGGCAGAGGAGCGTGC +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCEHRPG*LGRGAC
Trigger: GCACGCTCCTCTGCCAAGCCATCCAGGCCTATGCTC...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTTCGGGCACTGCACTGTaGACACACACCCAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGSGTAL*THTQSG
Trigger: CCCAGACTGGGTGTGTGTCCACAGTGCAGTGCCCGA...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCACATCCTTGCAGGGAATaGTCTCGCAGTGGACCCTGT +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASHPCRE*SRSGPC
Trigger: ACAGGGTCCACTGCGAGACCATTCCCTGCAAGGATG...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCTCCCCACAGCCCACCTaGCAGAAGGTGTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCSPQPT*QKVSLF
Trigger: GAAGAGGGACACCTTCTGCCAGGTGGGCTGTGGGGA...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAAGAAACCTTCCACCTTaGCACAGGACGGACAGCGGT +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASRNLPP*HRTDSG
Trigger: ACCGCTGTCCGTCCTGTGCCAAGGTGGAAGGTTTCT...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAGTTTCTGGCAGATGGTaGACAGCACGAAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASVSGRW*TARRRS
Trigger: ACTGCGCCTTCGTGCTGTCCACCATCTGCCAGAAAC...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAATGTCGGGCAGTTTCTaGCAGATGGTGGACAGCACG +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASMSGSF*QMVDST
Trigger: CGTGCTGTCCACCATCTGCCAGAAACTGCCCGACAT...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCATGTCGGGCAGTTTCTaGCAGATGGTGGACAGCACG +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSMSGSF*QMVDST
Trigger: CGTGCTGTCCACCATCTGCCAGAAACTGCCCGACAT...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCCGCACTGGCTGGTGCTaGGGACGAAGCCCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLRTGWC*GRSPGC
Trigger: GCAACCAGGGCTTCGTCCTCAGCACCAGCCAGTGCG...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGAGTCACAGAGCTCTaGCTCATTGCCCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHRVTEL*LIAPTL
Trigger: CAGAGTGGGGGCAATGAGTCAGAGCTCTGTGACTCT...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATCTTGGGGAAAGAGTCTaGGCTTGGCCTGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHLGERV*AWPASC
Trigger: ACAGGAAGCAGGCCAAGCTCAGACTCTTTCCCCAAG...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAGGGTTAACTTTGCTGTaGCACTTGGAGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASGLTLL*HLEKAA
Trigger: CGCTGCCTTCTCCAAGTGTCACAGCAAAGTTAACCC...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGTGCAGCTCTTGCCGTTaGGGACGTAGCCAGCGTCGC +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLCSSCR*GRSQRR
Trigger: GCGACGCTGGCTACGTCCTCAACGGCAAGAGCTGCA...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTCTGCCATGGCAAGGTTaGAGGACACAGTGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGLPWQG*RTQWVE
Trigger: CTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAG...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCATTGTCCCCTTGAGGTaGAGCCATTGGCTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSIVPLR*SHWLGQ
Trigger: TTGACCCAGCCAATGGCTGCACCTCAAGGGGACAAT...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAAGACGGCTGAACCTCTaGGGTGTTCATTCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASRRLNL*GVHSWP
Trigger: AGGCCAAGAATGAACACCGCAGAGGTTCAGCCGTCT...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCAGACGGCTGAACCTCTaGGGTGTTCATTCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSRRLNL*GVHSWP
Trigger: AGGCCAAGAATGAACACCGCAGAGGTTCAGCCGTCT...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTGTCGCACTTCCAGTCTaGGTGGTACACACGCCAGCT +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGVALPV*VVHTPA
Trigger: AGCTGGCGTGTGTACCACGCAGACTGGAAGTGCGAC...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCCAGCGTCGCACTGGGTaGAGTTGTCGACGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLQRRTG*SCRRSR
Trigger: CCGGCTGCGTCGACAACTGCACCCAGTGCGACGCTG...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTCTTGGCAGAGGAGCGTaGCATTGTCCCTCACACTGC +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGLGRGA*HCPSHC
Trigger: GCAGTGTGAGGGACAATGGCACGCTCCTCTGCCAAG...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTGCTCCGAGTCATTGTTaGAGGCCTTCAGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGAPSHC*RPSAGP
Trigger: GGGACCTGCTGAAGGCCTGCAACAATGACTCGGAGC...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATATTCTTGCAGGCGCTTaGATACCGGGCCACAGAGTC +
Preference number: 4 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHILAGA*IPGHRV
Trigger: GACTCTGTGGCCCGGTATGCAAGCGCCTGCAAGAAT...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCTTGGTGGCAAGTTGGTaGCCCTCAAAGTTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSLVASW*PSKLQP
Trigger: TGGCTGCAACTTTGAGGGGCACCAACTTGCCACCAA...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCCGTAGCCTGAGACGATaGAGGAGGCGTCGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLRSLRR*RRRRCG
Trigger: CCCGCACCGACGCCTCCTGCATCGTCTCAGGCTACG...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCCTCGGTGGATCACGATaGTGTAGCCAAACACGGTCA +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSLGGSR*CSQTRS
Trigger: TGACCGTGTTTGGCTACAGCATCGTGATCCACCGAG...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCACACACAGACCATAGGTaGTGTTCTGCATGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASHTDHR*CSACSE
Trigger: CTCGGAGCATGCAGAACAGCACCTATGGTCTGTGTG...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTGGTTGGGGATCAGGCTaGACAGCTGCTGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGGWGSG*TAAALW
Trigger: CCAAAGTGCAGCAGCTGTGCAGCCTGATCCCCAACC...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTCCGCGCCCCCATCGATaGAAGAGTCAAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGPRPHR*KSQTGS
Trigger: ACTGCCTGTTTGACTCTTGCATCGATGGGGGCGCGG...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGCAGCTGCAGGCGGTCTaGACCGCGCCCCCATCGATG +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQQLQAV*TAPPSM
Trigger: CATCGATGGGGGCGCGGTGCAGACCGCCTGCAGCTG...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCCGCACTGAATCACGTTaGGACGGAAACAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCRTESR*DGNSGS
Trigger: GCTGCCGCTGTTTCCGTCGCAACGTGATTCAGTGCG...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCACCATTTGGGCTGCTTTaGAGGTCACCTCTGCATCGA +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASPFGLL*RSPLHR
Trigger: TCGATGCAGAGGTGACCTGCAAAGCAGCCCAAATGG...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGCATCCACCCGGCTCGTaGAAATCTGCTCACACCCTC +
Preference number: 4 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWHPPGS*KSAHTL
Trigger: GAGGGTGTGAGCAGATTTGCACGAGCCGGGTGGATG...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAAAGAGTGTCTACCTCTaGAGCTCTTGCCGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASKSVYL*SSCRPP
Trigger: AGGAGGACGGCAAGAGCTGCAGAGGTAGACACTCTT...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645008.1
CDS-3UTR CCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGTGGCAGCGTCGCACTaGGTGCAGTTGTCGACGCAG +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLVAASH*VQLSTQ
Trigger: CTGCGTCGACAACTGCACCCAGTGCGACGCTGCCAC...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCTCGCCAGTCTCCAATTaGAATGCCAAGGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSSPVSN*NAKGLA
Trigger: TGCCAAGCCCTTGGCATTCCAATTGGAGACTGGCGA...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTCCTCTGTGCACGGCGTaGCGCAGTTCCGCGAGGCCG +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPPLCTA*RSSARP
Trigger: CGGCCTCGCGGAACTGCGCCACGCCGTGCACAGAGG...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTCTCTGGGCACTCCAGTaGGCAGAAGTCATAGGTCCG +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGLWALQ*AEVIGP
Trigger: CGGACCTATGACTTCTGCCCACTGGAGTGCCCAGAG...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCCTCTGGGCACTCCAGTaGGCAGAAGTCATAGGTCCG +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCLWALQ*AEVIGP
Trigger: CGGACCTATGACTTCTGCCCACTGGAGTGCCCAGAG...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAAAAGTGGCTGTTCTCTaGGCACTCCAGTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASKVAVL*ALQWAE
Trigger: TTCTGCCCACTGGAGTGCCCAGAGAACAGCCACTTT...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTGCAGGACTCGTAGAATaGGAGGGGATCGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGAGLVE*EGIEKP
Trigger: GGGCTTCTCGATCCCCTCCCATTCTACGAGTCCTGC...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCAGCTTGGATGGTCGCTaGTTTCTGGACCTTGGACCA +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSSLDGR*FLDLGP
Trigger: TGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCT...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGATCTCGGGGGTTCTTaGCCCCGGGAGGCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSDLGGS*PREAEE
Trigger: TTCTTCAGCCTCCCGGGGTCAAGAACCCCCGAGATC...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGCCAGACAGCGGCACTTaGCGGTGCAGTTCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWPDSGT*RCSSSH
Trigger: ATGACTTGAACTGCACCGTCAAGTGCCGCTGTCTGG...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTCGCACTGGCTGGTGCTaGGGACGAAGCCCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSRTGWC*GRSPGC
Trigger: GCAACCAGGGCTTCGTCCTCAGCACCAGCCAGTGCG...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTGCACCTGGTTCTGGCTaGGCAGGCACACGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPAPGSG*AGTRSP
Trigger: GGGAGACCGTGTGCCTGCTCAGCCAGAACCAGGTGC...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCAGAGTCACAGAGCTCTaGCTCATTGCCCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCRVTEL*LIAPTL
Trigger: CAGAGTGGGGGCAATGAGTCAGAGCTCTGTGACTCT...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAAACCCACAAGGCCAGTaGCGGGTCCCGGTCCTCATT +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGNPQGQ*RVPVLI
Trigger: AATGAGGACCGGGACCCGTCACTGGCCTTGTGGGTT...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGAACCCACAAGGCCAGTaGCGGGTCCCGGTCCTCATT +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLNPQGQ*RVPVLI
Trigger: AATGAGGACCGGGACCCGTCACTGGCCTTGTGGGTT...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATCTGCCCAAACTCATTaGCACTCGATGCAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASSAQTH*HSMQAD
Trigger: GTCTGCTTGCATCGAGTGTCAATGAGTTTGGGCAGA...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGAGGAGGTCTTGGTGCTaGAGCAGCCGCGCACCCCGT +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQRRSWC*SSRAPR
Trigger: ACGGGGTGCGCGGCTGCTTCAGCACCAAGACCTCCT...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTTCGAGGGAGAGTTGCTaGCCGAGTGGCCTTCAAATC +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGSRESC*PSGLQI
Trigger: GATTTGAAGGCCACTCGGTCAGCAACTCTCCCTCGA...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645008.1
CDS-3UTR GCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGGGAGGCTGGAAGTCTaGAAACACTGTCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLGRLEV*KHCRAS
Trigger: GCTGGCCCGACAGTGTTTGCAGACTTCCAGCCTCCC...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTCAGACATGGCCGGCCTaGCATCCGGGCGGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSQTWPA*HPGGGS
Trigger: ACTTCCTCCGCCCGGATGGCAGGCCGGCCATGTCTG...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTCAGACATGGCCGGCCTaGCATCCGGGCGGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPQTWPA*HPGGGS
Trigger: ACTTCCTCCGCCCGGATGGCAGGCCGGCCATGTCTG...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATTCATACACGCAGCTGTaGACAAAAGCAGTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHSYTQL*TKAVGS
Trigger: GGACCCCACTGCTTTTGTGCACAGCTGCGTGTATGA...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGACTGCCAGGTTGTCCGTaGACTTGCCGTTGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGLPGCP*TCRWGD
Trigger: GTCTCCCCAACGGCAAGTGCACGGACAACCTGGCAG...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTTGCAGGAGGCGTCGGTaGGGGCTTGGCAGTAGTACA +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSCRRRR*GLGSST
Trigger: TGTACTACTGCCAAGCCCGCACCGACGCCTCCTGCA...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCGGTCATCATCAGGGTTaGCGTTGTAGCGGCCACACA +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCGHHQG*RCSGHT
Trigger: TGTGTGGCCGCTACAACGGCAACCCTGATGATGACC...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTGGTCATCATCAGGGTTaGCGTTGTAGCGGCCACACA +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGGHHQG*RCSGHT
Trigger: TGTGTGGCCGCTACAACGGCAACCCTGATGATGACC...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGGCTGCACAGCTGCTaGACTTTGGAGAAACCTTCC +
Preference number: 4 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHRLHSC*TLEKPS
Trigger: GGAAGGTTTCTCCAAAGTGCAGCAGCTGTGCAGCCT...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATTGGGCTCGTAATATTTaGCATCGGAGTAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHWARNI*HRSSSR
Trigger: GCGGCTGCTACTCCGATGGCAAATATTACGAGCCCA...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCAGCCGCGCACCCCGTTaGGCAGCGCACACTCCTCGT +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGSRAPR*AAHTPR
Trigger: ACGAGGAGTGTGCGCTGCGCAACGGGGTGCGCGGCT...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTGGGCCAGCACCACGCTaGTTACCACCGGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPGPAPR*LPPASL
Trigger: GAGGGAAGCCGGTGGTAAGCAGCGTGGTGCTGGCCC...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCGCATACTGTGAGAACTaGAGCTCGTTGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCAYCEN*SSLQLG
Trigger: CCCCAGCTGCAACGAGCTGCAGTTCTCACAGTATGC...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392793.6
CDS-3UTR GCA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGCGGCTCGTGCAAATCTaGTCACACCCTCCATTGTCC +
Preference number: 4 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWRLVQI*SHPPLS
Trigger: GGACAATGGAGGGTGTGAGCAGATTTGCACGAGCCG...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAAGAACTGCAGCTCGTTaGAGCTCTTCTGCATGCCAT +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASRTAAR*SSSACH
Trigger: ATGGCATGCAGAAGAGCTGCAACGAGCTGCAGTTCT...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTGACACTAGGACGGCCTaGAAGGTGTTCACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGDTRTA*KVFTGV
Trigger: CACACCTGTGAACACCTTCCAGGCCGTCCTAGTGTC...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCAAAAGTGTGGTAGTGTaGCTCCCCAAACACCACGCA +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSKSVVV*LPKHHA
Trigger: TGCGTGGTGTTTGGGGAGCCACACTACCACACTTTT...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGGATCCAGGACAGACATaGCCGGCCTGCCATCCGGGC +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQDPGQT*PACHPG
Trigger: GCCCGGATGGCAGGCCGGCCATGTCTGTCCTGGATC...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTTCGGGCACTGCACTGTaGACACACACCCAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSSGTAL*THTQSG
Trigger: CCCAGACTGGGTGTGTGTCCACAGTGCAGTGCCCGA...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCACACGGTCTCCCGCTTaGGGAAGCAGCCCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLTRSPA*GSSPGS
Trigger: GCTACCAGGGCTGCTTCCCCAAGCGGGAGACCGTGT...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTGGAATGGTCTCGCAGTaGACCCTGTTGTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGGMVSQ*TLLSVP
Trigger: TGGCACAGACAACAGGGTCCACTGCGAGACCATTCC...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAACCTTCCACCTTaGCACAGGACGGACAGCGGT +
Preference number: 4 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWRNLPP*HRTDSG
Trigger: ACCGCTGTCCGTCCTGTGCCAAGGTGGAAGGTTTCT...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCCTTTGCTGTGACACTTaGAGAAGGCAGCGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSLCCDT*RRQRSG
Trigger: ACCAGAACGCTGCCTTCTCCAAGTGTCACAGCAAAG...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTGAAGGCGCAGTTGGCTaGGAAGCGCAGGAAGGCGCC +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPEGAVG*EAQEGA
Trigger: GGCGCCTTCCTGCGCTTCCCAGCCAACTGCGCCTTC...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTGAAGGCGCAGTTGGCTaGGAAGCGCAGGAAGGCGCC +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSEGAVG*EAQEGA
Trigger: GGCGCCTTCCTGCGCTTCCCAGCCAACTGCGCCTTC...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATGGACCTTGGACCATTaGAGGCAGGTGGCATCATTT +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASWTLDH*RQVASF
Trigger: AAATGATGCCACCTGCCTCCAATGGTCCAAGGTCCA...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTGTCACCGTAATCCCCTaGGTCTGGCAGGTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSVTVIP*VWQVLA
Trigger: CGCCAGCACCTGCCAGACTCAGGGGATTACGGTGAC...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTCGCACACTCCTCGTCTaGCTTGCATTGGCGCGGGTC +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSRTLLV*LALARV
Trigger: GACCCGCGCCAATGCAAGTCAGACGAGGAGTGTGCG...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCCATGGCTGCATACTGTaGGAACTGCAGCTCGTTGCA +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCHGCIL*ELQLVA
Trigger: TGCAACGAGCTGCAGTTCTCACAGTATGCAGCCATG...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTCAAACACCACGCATGTaGTGGTCTCCACAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSQTPRM*WSPQRC
Trigger: GCAGCGCTGTGGAGACCAGCACATGCGTGGTGTTTG...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTGGGGTCCACGACAGTaGCACACTCCCACAGAGGGC +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQWGPRQ*HTPTEG
Trigger: GCCCTCTGTGGGAGTGTGGCACTGTCGTGGACCCCA...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTTCATACACGCAGCTGTaGACAAAAGCAGTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGSYTQL*TKAVGS
Trigger: GGACCCCACTGCTTTTGTGCACAGCTGCGTGTATGA...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTACTCGCAGCCCTCTGTaGACGGCGTGGCGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPTRSPL*TAWRSS
Trigger: GGAACTGCGCCACGCCGTGCACAGAGGGCTGCGAGT...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGATCCTCGCACAGGCATTaGACAGTGCAGTTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGSSHRH*TVQLAV
Trigger: CACGGCCAACTGCACTGTGCAATGCCTGTGCGAGGA...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGAGAGCTCTGACTCATTaGCCCCACTCTGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLRALTH*PHSGTG
Trigger: GCCTGTGCCAGAGTGGGGGCAATGAGTCAGAGCTCT...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAAGAGCTCTGACTCATTaGCCCCACTCTGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGRALTH*PHSGTG
Trigger: GCCTGTGCCAGAGTGGGGGCAATGAGTCAGAGCTCT...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCGGTGCCCCTCAAAGTTaGAGCCACACTCACTCCGCG +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLGAPQS*SHTHSA
Trigger: CGCGGAGTGAGTGTGGCTGCAACTTTGAGGGGCACC...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCTGTTGTCTGTGCCACTaGAATAGCAGAAGATCTGGC +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSCCLCH*NSRRSG
Trigger: GCCAGATCTTCTGCTATTGCAGTGGCACAGACAACA...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCGGCCACCTTCCTCCATaGAGTACTCATCATCCTTGC +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCGHLPP*STHHPC
Trigger: GCAAGGATGATGAGTACTGCATGGAGGAAGGTGGCC...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTGGCCACCTTCCTCCATaGAGTACTCATCATCCTTGC +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGGHLPP*STHHPC
Trigger: GCAAGGATGATGAGTACTGCATGGAGGAAGGTGGCC...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCGTAGCCTGAGACGATaGAGGAGGCGTCGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGRSLRR*RRRRCG
Trigger: CCCGCACCGACGCCTCCTGCATCGTCTCAGGCTACG...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGTTGGGGATCAGGCTaGACAGCTGCTGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSGWGSG*TAAALW
Trigger: CCAAAGTGCAGCAGCTGTGCAGCCTGATCCCCAACC...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGTTGGGGATCAGGCTaGACAGCTGCTGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGGWGSG*TAAALW
Trigger: CCAAAGTGCAGCAGCTGTGCAGCCTGATCCCCAACC...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAACAGCTGCAGGCGGTCTaGACCGCGCCCCCATCGATG +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQQLQAV*TAPPSM
Trigger: CATCGATGGGGGCGCGGTGCAGACCGCCTGCAGCTG...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTCCACGCAGTAGTGGCTaGAGTCACTCTTCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSPRSSG*SHSSGG
Trigger: TCCGCCTGAAGAGTGACTGCAGCCACTACTGCGTGG...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCTGGGCTCGTAATATTTaGCATCGGAGTAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCWARNI*HRSSSR
Trigger: GCGGCTGCTACTCCGATGGCAAATATTACGAGCCCA...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCACCAGAAACCCCTCACTaGTGTAGATTTTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASPETPH*CRFWLP
Trigger: TGGCAACCAAAATCTACAGCAGTGAGGGGTTTCTGG...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTGGGCCAGCACCACGCTaGTTACCACCGGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPGPAPR*LPPASL
Trigger: GAGGGAAGCCGGTGGTAAGCAGCGTGGTGCTGGCCC...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCCCATTTGGGCTGCTTTaGAGGTCACCTCTGCATCGA +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCPFGLL*RSPLHR
Trigger: TCGATGCAGAGGTGACCTGCAAAGCAGCCCAAATGG...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCAATCTTCCCCCTCGATaGCGGTGCACTGTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCNLPPR*RCTVCH
Trigger: ATGACAGACAGTGCACCGGCATCGAGGGGGAAGATT...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAAGAAGAATTTGCCTTTaGGTTCGCACACCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASRRICL*VRTPRR
Trigger: CCTACGAGGTGTGCGAACCCAAAGGCAAATTCTTCT...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAACACCACGCATGTGCTaGTCTCCACAGCGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGTPRMC*SPQRCS
Trigger: ACTGCAGCGCTGTGGAGACCAGCACATGCGTGGTGT...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTGTGGCAGCGTCGCACTaGGTGCAGTTGTCGACGCAG +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSVAASH*VQLSTQ
Trigger: CTGCGTCGACAACTGCACCCAGTGCGACGCTGCCAC...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTAGAAGAACTCCCCCATaGTGTAGTAGTGGCCGTCGA +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGRRTPP*CSSGRR
Trigger: TCGACGGCCACTACTACACCATGGGGGAGTTCTTCT...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCCAGTGCAGTTGGCCGTaGCCCAGAAGAACTCCCCCA +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLQCSWP*PRRTPP
Trigger: TGGGGGAGTTCTTCTGGGCCACGGCCAACTGCACTG...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAAAGGTGTGCAGCACCTaGTTCTGGCTGAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGKVCST*FWLSRH
Trigger: GTGCCTGCTCAGCCAGAACCAGGTGCTGCACACCTT...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTGATTTCCAAGTACTCTaGGCGCTCAGGGCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGDFQVL*ALRAGL
Trigger: AAGACCTGCCCTGAGCGCCCAGAGTACTTGGAAATC...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTTCATTGCCCCCACTCTaGCACAGGCGGAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSSLPPL*HRRKRQ
Trigger: CTGCCTTTTCCGCCTGTGCCAGAGTGGGGGCAATGA...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGATCATTGCCCCCACTCTaGCACAGGCGGAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGSLPPL*HRRKRQ
Trigger: CTGCCTTTTCCGCCTGTGCCAGAGTGGGGGCAATGA...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCAAAGTGGCTGTTCTCTaGGCACTCCAGTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCKVAVL*ALQWAE
Trigger: TTCTGCCCACTGGAGTGCCCAGAGAACAGCCACTTT...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGTGCACAGGATGAGTaGGCAGCTGGTCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGGAQDE*AAGLEV
Trigger: GACTTCCAGACCAGCTGCCCACTCATCCTGTGCACC...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTCCCCACAGCCCACCTaGCAGAAGGTGTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLSPQPT*QKVSLF
Trigger: GAAGAGGGACACCTTCTGCCAGGTGGGCTGTGGGGA...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGAGAAGGCAGCGTTCTaGTTGGGGATCAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSEKAAF*LGIRLH
Trigger: GTGCAGCCTGATCCCCAACCAGAACGCTGCCTTCTC...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTGCACGAAGGCGCAGTTaGCTGGGAAGCGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSARRRS*LGSAGR
Trigger: CCTTCCTGCGCTTCCCAGCCAACTGCGCCTTCGTGC...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGGCACGAAGGCGCAGTTaGCTGGGAAGCGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQARRRS*LGSAGR
Trigger: CCTTCCTGCGCTTCCCAGCCAACTGCGCCTTCGTGC...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGCAGGACTCGTAGAATaGGAGGGGATCGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGAGLVE*EGIEKP
Trigger: GGGCTTCTCGATCCCCTCCCATTCTACGAGTCCTGC...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTGCTCGCAAGTTCGGTTaGGACAGTCCGCCCCCACAC +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPARKFG*DSPPPH
Trigger: GTGTGGGGGCGGACTGTCCCAACCGAACTTGCGAGC...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATTGGACCTTGGACCATTaGAGGCAGGTGGCATCATTT +
Preference number: 4 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHWTLDH*RQVASF
Trigger: AAATGATGCCACCTGCCTCCAATGGTCCAAGGTCCA...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGATGGTCGCTGGTTTCTaGACCTTGGACCATTGGAGG +
Preference number: 4 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWMVAGF*TLDHWR
Trigger: CCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCAT...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
3UTR CAA 72 bp ACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTaGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGA +
Preference number: 4 (lower is better)
Translates to: TISPVAKAAMAR*KDTVGGEAPHR
Trigger: TCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATTGCCTCCATAAAACGTaGCTTCCTCCCATGTCACAA +
Preference number: 4 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHCLHKT*LPPMSQ
Trigger: TTGTGACATGGGAGGAAGTCACGTTTTATGGAGGCA...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTAAGGAATTGTCCCCTTaGGGTGCAGCCATTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSKELSP*GAAIGW
Trigger: CCAGCCAATGGCTGCACCTCAAGGGGACAATTCCTT...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCAGCTTCCTTTGGGGATaGGAATCTTGTAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSSFLWG*ESCSHS
Trigger: TGAATGGCTACAAGATTCTCATCCCCAAAGGAAGCT...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAAGAGTCACAGAGCTCTaGCTCATTGCCCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGRVTEL*LIAPTL
Trigger: CAGAGTGGGGGCAATGAGTCAGAGCTCTGTGACTCT...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTGCAGCTCTTGCCGTTaGGGACGTAGCCAGCGTCGC +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPCSSCR*GRSQRR
Trigger: GCGACGCTGGCTACGTCCTCAACGGCAAGAGCTGCA...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTGGCGCGGGTCGCACTaGATCACGTTGCGACGGAAA +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQWRGSH*ITLRRK
Trigger: TTTCCGTCGCAACGTGATTCAGTGCGACCCGCGCCA...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCCTGTTAGGTCCCCGTTaGAGTTGCCACAGAGACCGC +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLLLGPR*SCHRDR
Trigger: GCGGTCTCTGTGGCAACTTCAACGGGGACCTAACAG...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAAGAGGCTGGAGGAACTaGGTCAGAAATATTAAGCCA +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASRGWRN*VRNIKP
Trigger: TGGCTTAATATTTCTGACTCAGTTCCTCCAGCCTCT...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCTCCACCATTAAATCCTaGCTGTGCCATCACTCCACC +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCSTIKS*LCHHST
Trigger: GGTGGAGTGATGGCACAGGCAGGATTTAATGGTGGA...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCTGGGGTCCACGACAGTaGCACACTCCCACAGAGGGC +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGWGPRQ*HTPTEG
Trigger: GCCCTCTGTGGGAGTGTGGCACTGTCGTGGACCCCA...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCCTGAAGCTCGGGCACTaGACTGTGGACACACACCCA +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLLKLGH*TVDTHP
Trigger: TGGGTGTGTGTCCACAGTGCAGTGCCCGAGCTTCAG...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGGTTGTCCGTGCACTTaGCGTTGGGGAGACAGAACT +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLGCPCT*RWGDRT
Trigger: AGTTCTGTCTCCCCAACGGCAAGTGCACGGACAACC...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTCCACGTCCGCATTCTTaGAGGCGCTTGCATACCGGG +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPPRPHS*RRLHTG
Trigger: CCCGGTATGCAAGCGCCTGCAAGAATGCGGACGTGG...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTGGTGCCCCTCAAAGTTaGAGCCACACTCACTCCGCG +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPGAPQS*SHTHSA
Trigger: CGCGGAGTGAGTGTGGCTGCAACTTTGAGGGGCACC...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTCCTGAGTCTGGCAGGTaGTGGCGTAGTTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSPESGR*WRSSAA
Trigger: GGCTGCAGAACTACGCCAGCACCTGCCAGACTCAGG...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGCCGCGCACCCCGTTaGGCAGCGCACACTCCTCGT +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNSRAPR*AAHTPR
Trigger: ACGAGGAGTGTGCGCTGCGCAACGGGGTGCGCGGCT...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATCCAGAAACCCCTCACTaGTGTAGATTTTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHPETPH*CRFWLP
Trigger: TGGCAACCAAAATCTACAGCAGTGAGGGGTTTCTGG...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGCCGCACACTTTGTTCTaGAGCCTCTCGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLPHTLF*SLSLML
Trigger: CAGCATCAGCGAGAGGCTGCAGAACAAAGTGTGCGG...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTATCGGAGCTTATCATTaGTATCTCGGGTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGIGAYH*YLGWVW
Trigger: CCACACCCACCCGAGATAGCAATGATAAGCTCCGAT...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCCATCCACCCGGCTCGTaGAAATCTGCTCACACCCTC +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLHPPGS*KSAHTL
Trigger: GAGGGTGTGAGCAGATTTGCACGAGCCGGGTGGATG...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTAGAACTGCAGCTCGTTaGAGCTCTTCTGCATGCCAT +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGRTAAR*SSSACH
Trigger: ATGGCATGCAGAAGAGCTGCAACGAGCTGCAGTTCT...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCGCATACTGTGAGAACTaGAGCTCGTTGCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCAYCEN*SSLQLF
Trigger: GAAGAGCTGCAACGAGCTGCAGTTCTCACAGTATGC...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGTGGCTCTTTTCAAGATaGCAGGCTCCATGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWWLFSR*QAPWSL
Trigger: GAGAGACCATGGAGCCTGCCATCTTGAAAAGAGCCA...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCAGGTGTTCACAGGTGTaGTGCTGCTGCCTCCATAAA +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCRCSQV*CCCLHK
Trigger: TTTATGGAGGCAGCAGCACCACACCTGTGAACACCT...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGACACTAGGACGGCCTaGAAGGTGTTCACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGDTRTA*KVFTGV
Trigger: CACACCTGTGAACACCTTCCAGGCCGTCCTAGTGTC...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCACACCACGCATGTGCTaGTCTCCACAGCGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLTPRMC*SPQRCS
Trigger: ACTGCAGCGCTGTGGAGACCAGCACATGCGTGGTGT...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCCAGGAGCCTTGGAAGTaGAAGAGGAAGCCGTCAAAA +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCQEPWK*KRKPSK
Trigger: TTTTGACGGCTTCCTCTTCCACTTCCAAGGCTCCTG...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTAGTAGAGGGCTTCAGTaGCAGCGTCGCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPSRGLQ*QRRTGC
Trigger: GCACCCAGTGCGACGCTGCCACTGAAGCCCTCTACT...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTTGTGCACAAAAGCAGTaGGGTCCACGACAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSCAQKQ*GPRQCH
Trigger: GTGGCACTGTCGTGGACCCCACTGCTTTTGTGCACA...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGAATGGTCTCGCAGTaGACCCTGTTGTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGGMVSQ*TLLSVP
Trigger: TGGCACAGACAACAGGGTCCACTGCGAGACCATTCC...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTATGCAAGCAGACCCATaGGCATCTCCAGGTCATCAT +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGMQADP*ASPGHH
Trigger: ATGATGACCTGGAGATGCCCATGGGTCTGCTTGCAT...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGATGCAAGCAGACCCATaGGCATCTCCAGGTCATCAT +
Preference number: 4 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWMQADP*ASPGHH
Trigger: ATGATGACCTGGAGATGCCCATGGGTCTGCTTGCAT...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGGAGTCTGGCAGGTGCTaGCGTAGTTCTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQESGRC*RSSAAS
Trigger: GCTGGCTGCAGAACTACGCCAGCACCTGCCAGACTC...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAGAAGGCGCAGTTGGCTaGGAAGCGCAGGAAGGCGCC +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQEGAVG*EAQEGA
Trigger: GGCGCCTTCCTGCGCTTCCCAGCCAACTGCGCCTTC...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCGCACGAAGGCGCAGTTaGCTGGGAAGCGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGARRRS*LGSAGR
Trigger: CCTTCCTGCGCTTCCCAGCCAACTGCGCCTTCGTGC...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGTTTCTGGCAGATGGTaGACAGCACGAAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGVSGRW*TARRRS
Trigger: ACTGCGCCTTCGTGCTGTCCACCATCTGCCAGAAAC...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATGTATATCTGGATGTCTaGGCTGGTGTCAATCACCAG +
Preference number: 4 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHVYLDV*AGVNHQ
Trigger: CTGGTGATTGACACCAGCCCAGACATCCAGATATAC...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGTCTTCTGCATGCCATTaGTTTTCCAGCTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWSSACH*FSSSGP
Trigger: TGGCCCAGAGCTGGAAAACCAATGGCATGCAGAAGA...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCTCTTCTGCATGCCATTaGTTTTCCAGCTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCSSACH*FSSSGP
Trigger: TGGCCCAGAGCTGGAAAACCAATGGCATGCAGAAGA...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATTCACCCTGCATCTTCTaGATGTGCACATTGTCACAC +
Preference number: 4 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHSPCIF*MCTLSH
Trigger: GTGTGACAATGTGCACATCCAGAAGATGCAGGGTGA...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTGCTCGCAAGTTCGGTTaGGACAGTCCGCCCCCACAC +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPARKFG*DSPPPH
Trigger: GTGTGGGGGCGGACTGTCCCAACCGAACTTGCGAGC...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCGCTCGCAAGTTCGGTTaGGACAGTCCGCCCCCACAC +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGARKFG*DSPPPH
Trigger: GTGTGGGGGCGGACTGTCCCAACCGAACTTGCGAGC...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGCCAAAATGGATACATaGGCTCCCTGGGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSAKMDT*APWAEL
Trigger: AAGCTCAGCCCAGGGAGCTCATGTATCCATTTTGGC...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGCACCCAGGAGACGGCTaGACCTCTGCGGTGTTCATT +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQHPGDG*TSAVFI
Trigger: AATGAACACCGCAGAGGTTCAGCCGTCTCCTGGGTG...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCTCCCCAAGTCTAAGGTaGCAGGCAAAGAAGTCACTA +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCSPSLR*QAKKSL
Trigger: TAGTGACTTCTTTGCCTGTCACCTTAGACTTGGGGA...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTGGCCGTCTGTCTTGTTaGGGAAGCCGCAGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPGRLSC*GSRSSQ
Trigger: CTGACTACTGCGGCTTCCTCAACAAGACAGACGGCC...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATCGGGCTTCTTCTTGTTaGTGTCGATTTCCAAGTACT +
Preference number: 4 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHRASSC*CRFPST
Trigger: AGTACTTGGAAATCGACATCAACAAGAAGAAGCCCG...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCGATGCCTCCTATCTTaGCCTCCTGGTCGGCCACCA +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGRCLLS*PPGRPP
Trigger: TGGTGGCCGACCAGGAGGTCAAGATAGGAGGCATCG...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCAGCCCCCTGTGCAATTaGAGTATGTGGTGGACAGCC +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLSPLCN*SMWWTA
Trigger: GGCTGTCCACCACATACTTCAATTGCACAGGGGGCT...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTGCGGTAATAGGCAGTaGCGTTCACCACCCCATGGC +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPCGNRQ*RSPPHG
Trigger: GCCATGGGGTGGTGAACGTCACTGCCTATTACCGCA...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCACACTCACTCCGCGTaGCACACTGGCTGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGHTHSA*HTGCPV
Trigger: TACTGGGCAGCCAGTGTGTCACGCGGAGTGAGTGTG...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCCTTGGGGAAAGAGTCTaGGCTTGGCCTGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLLGERV*AWPASC
Trigger: ACAGGAAGCAGGCCAAGCTCAGACTCTTTCCCCAAG...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTAACCCACAAGGCCAGTaGCGGGTCCCGGTCCTCATT +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPNPQGQ*RVPVLI
Trigger: AATGAGGACCGGGACCCGTCACTGGCCTTGTGGGTT...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGGTTAACTTTGCTGTaGCACTTGGAGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGGLTLL*HLEKAA
Trigger: CGCTGCCTTCTCCAAGTGTCACAGCAAAGTTAACCC...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAACGCACACTCCTCGTCTaGCTTGCATTGGCGCGGGTC +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQRTLLV*LALARV
Trigger: GACCCGCGCCAATGCAAGTCAGACGAGGAGTGTGCG...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGATTAAAGACGGTGACGTaGAAGCGACAGGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGLKTVT*KRQVRE
Trigger: CTCCCTGACCTGTCGCTTTCACGTCACCGTCTTTAA...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATCCTAATAGGTCCCACTaGAATGATCTGTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHPNRSH*NDLFFG
Trigger: CCCAAAGAACAGATCATTTCAGTGGGACCTATTAGG...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTCTGCCATGGCAAGGTTaGAGGACACAGTGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSLPWQG*RTQWVE
Trigger: CTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAG...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGCCTCGAATTCCATTGTaGACATCTGCCCAAAATGGG +
Preference number: 4 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWPRIPL*TSAQNG
Trigger: CCCATTTTGGGCAGATGTGCACAATGGAATTCGAGG...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCCCTCGAATTCCATTGTaGACATCTGCCCAAAATGGG +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCPRIPL*TSAQNG
Trigger: CCCATTTTGGGCAGATGTGCACAATGGAATTCGAGG...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCATTAAATCCTGCCTGTaGCATCACTCCACCAAGACC +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCIKSCL*HHSTKT
Trigger: GGTCTTGGTGGAGTGATGGCACAGGCAGGATTTAAT...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTCATTGTCCCTCACACTaGACAGGTCATACACGCAGC +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSHCPSH*TGHTRS
Trigger: GCTGCGTGTATGACCTGTGCAGTGTGAGGGACAATG...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGTCTCCAATTGGAATaGCAAGGGCTTGGCACACAA +
Preference number: 4 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWSLQLE*QGLGTQ
Trigger: TTGTGTGCCAAGCCCTTGGCATTCCAATTGGAGACT...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACTCGCAGCCCTCTGTaGACGGCGTGGCGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPTRSPL*TAWRSS
Trigger: GGAACTGCGCCACGCCGTGCACAGAGGGCTGCGAGT...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTACAGGCATTGCACAGTaGAGTTGGCCGTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPTGIAQ*SWPWPR
Trigger: TCTGGGCCACGGCCAACTGCACTGTGCAATGCCTGT...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTCCACGTCCGCATTCTTaGAGGCGCTTGCATACCGGG +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPPRPHS*RRLHTG
Trigger: CCCGGTATGCAAGCGCCTGCAAGAATGCGGACGTGG...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCAGTACTCATCATCCTTaGAGGGAATGGTCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCSTHHP*REWSRS
Trigger: ACTGCGAGACCATTCCCTGCAAGGATGATGAGTACT...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGACACACAGACCATAGGTaGTGTTCTGCATGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGHTDHR*CSACSE
Trigger: CTCGGAGCATGCAGAACAGCACCTATGGTCTGTGTG...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAAGTTCTGCAGCCAGCTaGAGGCGGTCTGCACCGCGC +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPSSAAS*RRSAPR
Trigger: GCGCGGTGCAGACCGCCTGCAGCTGGCTGCAGAACT...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTCCACGCAGTAGTGGCTaGAGTCACTCTTCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPPRSSG*SHSSGG
Trigger: TCCGCCTGAAGAGTGACTGCAGCCACTACTGCGTGG...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTAGGCGCCGTCGAAGGTaGGGAAGACGCCGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILRRRRR*GRRRRR
Trigger: CCGGCGGCGGCGTCTTCCGCACCTTCGACGGCGCCT...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGAGAACTGCAGCTCGTTaGAGCTGGGGGCAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQRTAAR*SWGQEV
Trigger: GACCTCTTGCCCCCAGCTGCAACGAGCTGCAGTTCT...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392793.6
CDS-3UTR GCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGAATCTTCCCCCTCGATaGCGGTGCACTGTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLNLPPR*RCTVCH
Trigger: ATGACAGACAGTGCACCGGCATCGAGGGGGAAGATT...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCCGGCTCGTGCAAATCTaGTCACACCCTCCATTGTCC +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLRLVQI*SHPPLS
Trigger: GGACAATGGAGGGTGTGAGCAGATTTGCACGAGCCG...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGAATTTGCCTTTaGGTTCGCACACCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWRRICL*VRTPRR
Trigger: CCTACGAGGTGTGCGAACCCAAAGGCAAATTCTTCT...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAGATCCAGGACAGACATaGCCGGCCTGCCATCCGGGC +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPDPGQT*PACHPG
Trigger: GCCCGGATGGCAGGCCGGCCATGTCTGTCCTGGATC...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGATCGCCAGTCTCCAATTaGAATGCCAAGGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGSPVSN*NAKGLA
Trigger: TGCCAAGCCCTTGGCATTCCAATTGGAGACTGGCGA...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACACACACCCAGTCTaGGTTCGCCAGTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLDTHPV*VRQSPI
Trigger: AATTGGAGACTGGCGAACCCAGACTGGGTGTGTGTC...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAAGAAGAACTCCCCCATaGTGTAGTAGTGGCCGTCGA +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGRRTPP*CSSGRR
Trigger: TCGACGGCCACTACTACACCATGGGGGAGTTCTTCT...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTAAGGTGTGCAGCACCTaGTTCTGGCTGAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPKVCST*FWLSRH
Trigger: GTGCCTGCTCAGCCAGAACCAGGTGCTGCACACCTT...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTCCGTGCACTTGCCGTTaGGGAGACAGAACTCGTCAC +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSPCTCR*GDRTRH
Trigger: GTGACGAGTTCTGTCTCCCCAACGGCAAGTGCACGG...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTAGGCAGCGTTCTGGTTaGGGATCAGGCTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPRQRSG*GSGCTA
Trigger: AGCTGTGCAGCCTGATCCCCAACCAGAACGCTGCCT...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCGAGTCTGGCAGGTGCTaGCGTAGTTCTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGESGRC*RSSAAS
Trigger: GCTGGCTGCAGAACTACGCCAGCACCTGCCAGACTC...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTCTCGTAATGGCTGTTTaGAGGGCAGGTGACAGTGCA +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSLVMAV*RAGDSA
Trigger: TGCACTGTCACCTGCCCTCCAAACAGCCATTACGAG...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGGTATATCTGGATGTCTaGGCTGGTGTCAATCACCAG +
Preference number: 4 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWVYLDV*AGVNHQ
Trigger: CTGGTGATTGACACCAGCCCAGACATCCAGATATAC...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCTTAGGATTAAATGTGTaGCGTCAGCTCCAACCACAA +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSLGLNV*RQLQPQ
Trigger: TTGTGGTTGGAGCTGACGCCACACATTTAATCCTAA...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTCATTGCTATCTCGGGTaGGTGTGGCATAGCATTTGT +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGHCYLG*VWHSIC
Trigger: ACAAATGCTATGCCACACCCACCCGAGATAGCAATG...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTATGGTCGCTGGTTTCTaGACCTTGGACCATTGGAGG +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSMVAGF*TLDHWR
Trigger: CCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCAT...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTAGCGGCCTGGAACATTaGCGTTTGTGGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPSGLEH*RLWSPG
Trigger: TCCAGGAGACCACAAACGTCAATGTTCCAGGCCGCT...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGTAGATCTCATTGTTaGAATCCAGACAGCGGCACT +
Preference number: 4 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWSRSHC*NPDSGT
Trigger: AGTGCCGCTGTCTGGATTTCAACAATGAGATCTACT...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCTTGGCCTCCACACTaGAGAAAGGGAGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPSWPPH*RKGGWK
Trigger: CTTCCAGCCTCCCTTTCTTCAGTGTGGAGGCCAAGA...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTGGCCGTCTGTCTTGTTaGGGAAGCCGCAGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPGRLSC*GSRSSQ
Trigger: CTGACTACTGCGGCTTCCTCAACAAGACAGACGGCC...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAACGATGCCTCCTATCTTaGCCTCCTGGTCGGCCACCA +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQRCLLS*PPGRPP
Trigger: TGGTGGCCGACCAGGAGGTCAAGATAGGAGGCATCG...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTGCGGTAATAGGCAGTaGCGTTCACCACCCCATGGC +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPCGNRQ*RSPPHG
Trigger: GCCATGGGGTGGTGAACGTCACTGCCTATTACCGCA...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACGTAGTGGCCGTAGCCTaGGACGATGCAGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNVVAVA*DDAGGV
Trigger: GACGCCTCCTGCATCGTCTCAGGCTACGGCCACTAC...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCGGAAGCCATCAAAGGTaGGGTAGTGGCCGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGGSHQR*GSGRSL
Trigger: CAGGCTACGGCCACTACCTCACCTTTGATGGCTTCC...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCGGGTTAACTTTGCTGTaGCACTTGGAGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLGLTLL*HLEKAA
Trigger: CGCTGCCTTCTCCAAGTGTCACAGCAAAGTTAACCC...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCTGTTAGGTCCCCGTTaGAGTTGCCACAGAGACCGC +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGLLGPR*SCHRDR
Trigger: GCGGTCTCTGTGGCAACTTCAACGGGGACCTAACAG...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTCTGTTAGGTCCCCGTTaGAGTTGCCACAGAGACCGC +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPLLGPR*SCHRDR
Trigger: GCGGTCTCTGTGGCAACTTCAACGGGGACCTAACAG...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGAGCCCTTCATGTCGGTaGGCTTCAGGCAGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQSPSCR*ASGSSH
Trigger: ATGGCTACTGCCTGAAGCTCACCGACATGAAGGGCT...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCACAGCTCATAAGCACATaGAAATTCCACATTGATCGT +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASQLIST*KFHIDR
Trigger: ACGATCAATGTGGAATTTTCATGTGCTTATGAGCTG...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGCCTAATAGGTCCCACTaGAATGATCTGTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWPNRSH*NDLFFG
Trigger: CCCAAAGAACAGATCATTTCAGTGGGACCTATTAGG...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATGACTTGAAGTTCCATTaGAGAATTAGAGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHDLKFH*RIRGSA
Trigger: TGCAGAGCCTCTAATTCTTCAATGGAACTTCAAGTC...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCCAGGTGGCATCATTTTaGGATGCTGGACACTTTCAA +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCQVASF*DAGHFQ
Trigger: TTGAAAGTGTCCAGCATCTCAAAATGATGCCACCTG...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTCAGGTGGCATCATTTTaGGATGCTGGACACTTTCAA +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGQVASF*DAGHFQ
Trigger: TTGAAAGTGTCCAGCATCTCAAAATGATGCCACCTG...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCGAAATAGCACTGGCTTaGCAGATTTCTCTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCEIALA*QISLVR
Trigger: TCTGACCAGAGAAATCTGTCAAGCCAGTGCTATTTC...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGATCCATTGTGCACATCTaGCCAAAATGGGGCGACGAA +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGSIVHI*PKWGDE
Trigger: TTCGTCGCCCCATTTTGGGCAGATGTGCACAATGGA...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTGTCGCACTTCCAGTCTaGGTGGTACACACGCCAGCT +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPVALPV*VVHTPA
Trigger: AGCTGGCGTGTGTACCACGCAGACTGGAAGTGCGAC...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACGGACGAAGCCCTGGTTaGACTCGCAGCCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNGRSPG*TRSPLC
Trigger: GCACAGAGGGCTGCGAGTGCAACCAGGGCTTCGTCC...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTACAGGCATTGCACAGTaGAGTTGGCCGTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPTGIAQ*SWPWPR
Trigger: TCTGGGCCACGGCCAACTGCACTGTGCAATGCCTGT...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTATTCTTGCAGGCGCTTaGATACCGGGCCACAGAGTC +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPILAGA*IPGHRV
Trigger: GACTCTGTGGCCCGGTATGCAAGCGCCTGCAAGAAT...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGGACCCTGTTGTCTGTaGCACTGCAATAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLGPCCL*HCNSRR
Trigger: TCTTCTGCTATTGCAGTGGCACAGACAACAGGGTCC...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAATGCAGGAGGCGTCGGTaGGGGCTTGGCAGTAGTACA +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQCRRRR*GLGSST
Trigger: TGTACTACTGCCAAGCCCGCACCGACGCCTCCTGCA...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGACGGTCACGTCCACCTaGTTAACCCACAAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQTVTST*LTHKAS
Trigger: ACTGGCCTTGTGGGTTAAGCAGGTGGACGTGACCGT...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAATCAGGCTGCACAGCTaGTGCACTTTGGAGAAACCT +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGIRLHS*CTLEKP
Trigger: AGGTTTCTCCAAAGTGCAGCAGCTGTGCAGCCTGAT...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGATCAGGCTGCACAGCTaGTGCACTTTGGAGAAACCT +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLIRLHS*CTLEKP
Trigger: AGGTTTCTCCAAAGTGCAGCAGCTGTGCAGCCTGAT...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAACCTGAGTCTGGCAGGTaGTGGCGTAGTTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQPESGR*WRSSAA
Trigger: GGCTGCAGAACTACGCCAGCACCTGCCAGACTCAGG...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTACTCCTCGTCTGACTTaGATTGGCGCGGGTCGCACT +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPTPRLT*IGAGRT
Trigger: AGTGCGACCCGCGCCAATGCAAGTCAGACGAGGAGT...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTTGCATCTTCTGGATGTaGACATTGTCACACATGGCT +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGCIFWM*TLSHMA
Trigger: AGCCATGTGTGACAATGTGCACATCCAGAAGATGCA...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTCATCCACCCGGCTCGTaGAAATCTGCTCACACCCTC +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPHPPGS*KSAHTL
Trigger: GAGGGTGTGAGCAGATTTGCACGAGCCGGGTGGATG...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTAAATGCCCAGCGGCCTaGAACATTGACGTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSKCPAA*NIDVCG
Trigger: ACCACAAACGTCAATGTTCCAGGCCGCTGGGCATTT...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGGTGCAGCCATTGGCTaGGTCAATTTCCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLGAAIG*VNFLSI
Trigger: GATGGAAAGGAAATTGACCCAGCCAATGGCTGCACC...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAGAGCATAGGCCTGGATaGCTTGGCAGAGGAGCGTGC +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQEHRPG*LGRGAC
Trigger: GCACGCTCCTCTGCCAAGCCATCCAGGCCTATGCTC...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTCCTATCTTGACCTCCTaGTCGGCCACCAGGATCCGA +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPPILTS*SATRIR
Trigger: TCGGATCCTGGTGGCCGACCAGGAGGTCAAGATAGG...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTATCTTGACCTCCTaGTCGGCCACCAGGATCCGA +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGPILTS*SATRIR
Trigger: TCGGATCCTGGTGGCCGACCAGGAGGTCAAGATAGG...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTCAGTCACCACGCCCTTaGACTCCACTGTCGTACTGT +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSQSPRP*TPLSYC
Trigger: ACAGTACGACAGTGGAGTCCAAGGGCGTGGTGACTG...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTACGTTCACCACCCCATaGCACTCCAGGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPTFTTP*HSRKEL
Trigger: CAGCTCCTTCCTGGAGTGCCATGGGGTGGTGAACGT...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTCATTGCCCCCACTCTaGCACAGGCGGAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPSLPPL*HRRKRQ
Trigger: CTGCCTTTTCCGCCTGTGCCAGAGTGGGGGCAATGA...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTCTCTGGGCACTCCAGTaGGCAGAAGTCATAGGTCCG +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPLWALQ*AEVIGP
Trigger: CGGACCTATGACTTCTGCCCACTGGAGTGCCCAGAG...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTAGAAGGTCTCATTGGTaGCAAGTTGGTGCCCCTCAA +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSRRSHW*QVGAPQ
Trigger: TTGAGGGGCACCAACTTGCCACCAATGAGACCTTCT...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTCCCAGAAGGTCTCATTaGTGGCAAGTTGGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPPRRSH*WQVGAP
Trigger: AGGGGCACCAACTTGCCACCAATGAGACCTTCTGGG...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTGGAATGGTCTCGCAGTaGACCCTGTTGTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSGMVSQ*TLLSVP
Trigger: TGGCACAGACAACAGGGTCCACTGCGAGACCATTCC...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGGTTTCCACCACCACGTaGAAGCCAAAGGAAAAGATA +
Preference number: 4 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWVSTTT*KPKEKI
Trigger: TATCTTTTCCTTTGGCTTCCACGTGGTGGTGGAAAC...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGATGCAAGCAGACCCATaGGCATCTCCAGGTCATCAT +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLMQADP*ASPGHH
Trigger: ATGATGACCTGGAGATGCCCATGGGTCTGCTTGCAT...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTCTTTGCTGTGACACTTaGAGAAGGCAGCGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSLCCDT*RRQRSG
Trigger: ACCAGAACGCTGCCTTCTCCAAGTGTCACAGCAAAG...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAGAGTCTGGCAGGTGCTaGCGTAGTTCTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQESGRC*RSSAAS
Trigger: GCTGGCTGCAGAACTACGCCAGCACCTGCCAGACTC...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTGCGGCGCAGCGGGGCTaGCAGACACTCACGCAGCTC +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILAAQRG*QTLTQL
Trigger: GAGCTGCGTGAGTGTCTGCCAGCCCCGCTGCGCCGC...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTCACTCTTCAGGCGGATaGCGGCGCAGCGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFHSSGG*RRSGAG
Trigger: GCCAGCCCCGCTGCGCCGCCATCCGCCTGAAGAGTG...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCAAGTTGATGATAAGCTaGAAGGAGATGTCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCKLMIS*KEMSGS
Trigger: ACTGCCCGACATCTCCTTCCAGCTTATCATCAACTT...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTTTGGTTTTCCAGCTCTaGGCCAGCACCACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSLVFQL*ASTTLL
Trigger: AAGCAGCGTGGTGCTGGCCCAGAGCTGGAAAACCAA...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTTCTTCTGCATGCCATTaGTTTTCCAGCTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSSSACH*FSSSGP
Trigger: TGGCCCAGAGCTGGAAAACCAATGGCATGCAGAAGA...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCGCAGCTCGTTGCAGCTaGGGGCAAGAGGTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGAARCS*GQEVSS
Trigger: AGAAGAGACCTCTTGCCCCCAGCTGCAACGAGCTGC...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392793.6
CDS-3UTR CCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTATGGACACTTCCATTTaGGCTGCTTTGCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSMDTSI*AALQVT
Trigger: GGTGACCTGCAAAGCAGCCCAAATGGAAGTGTCCAT...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCCTCTCAAAACCGAGCTaGAAGAGCTTGCACTTAGAT +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCLSKPS*KSLHLD
Trigger: ATCTAAGTGCAAGCTCTTCCAGCTCGGTTTTGAGAG...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTGCTGCCTTCTTGGGTTaGAACTGTCAGGTTAATTAC +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGAAFLG*NCQVNY
Trigger: GTAATTAACCTGACAGTTCCAACCCAAGAAGGCAGC...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCAATCCTGGAATTGTGTaGGCAAGTGATTTTACAGGA +
Preference number: 4 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSNPGIV*ASDFTG
Trigger: TCCTGTAAAATCACTTGCCCACACAATTCCAGGATT...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGATCTGAAAGAGGAGCTTaGATGGTCGCTGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGSERGA*MVAGFW
Trigger: CCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGA...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGACAACAATATCCCCAGTaGCCAAAGCTGCCATGGCAA +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGQQYPQ*PKLPWQ
Trigger: TTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTG...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCGAGTTGCTGACCGAGTaGCCTTCAAATCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCELLTE*PSNLNF
Trigger: GAAATTCAGATTTGAAGGCCACTCGGTCAGCAACTC...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645008.1
CDS-3UTR TCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGGCTCACTAGCACATTaGAGGAAACAACTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLGSLAH*RKQLRC
Trigger: ACAACGGAGTTGTTTCCTTCAATGTGCTAGTGAGCC...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCGAAAGGATTCTGGCGTaGACTGGCTCACTAGCACAT +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLERILA*TGSLAH
Trigger: ATGTGCTAGTGAGCCAGTTCACGCCAGAATCCTTTC...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTCCAGACAGCGGCACTTaGCGGTGCAGTTCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPPDSGT*RCSSSH
Trigger: ATGACTTGAACTGCACCGTCAAGTGCCGCTGTCTGG...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCTCTTGGCCTCCACACTaGAGAAAGGGAGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGSWPPH*RKGGWK
Trigger: CTTCCAGCCTCCCTTTCTTCAGTGTGGAGGCCAAGA...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACACGGAGTAGTGGCTaGAGCTCGGGCACTGCACTG +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPTRSSG*SSGTAL
Trigger: CAGTGCAGTGCCCGAGCTTCAGCCACTACTCCGTGT...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGCAATTCCACTTCCTaGCCATTCAACTTGACTTCC +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSGNSTS*PFNLTS
Trigger: GGAAGTCAAGTTGAATGGTCAGGAAGTGGAATTGCC...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGGCAATTCCACTTCCTaGCCATTCAACTTGACTTCC +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLGNSTS*PFNLTS
Trigger: GGAAGTCAAGTTGAATGGTCAGGAAGTGGAATTGCC...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCACACACTCACTCCGCGTaGCACACTGGCTGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPHTHSA*HTGCPV
Trigger: TACTGGGCAGCCAGTGTGTCACGCGGAGTGAGTGTG...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTCTGCCCAAACTCATTaGCACTCGATGCAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLSAQTH*HSMQAD
Trigger: GTCTGCTTGCATCGAGTGTCAATGAGTTTGGGCAGA...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTCATGGCTGCATACTGTaGGAACTGCAGCTCGTTGCA +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSHGCIL*ELQLVA
Trigger: TGCAACGAGCTGCAGTTCTCACAGTATGCAGCCATG...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTAGCCCTTCATGTCGGTaGGCTTCAGGCAGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPSPSCR*ASGSSH
Trigger: ATGGCTACTGCCTGAAGCTCACCGACATGAAGGGCT...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCATCTTCAACCACTCCTaGGCAATTCTCCTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCIFNHS*AILLLN
Trigger: ATTGAGAAGGAGAATTGCTCAGGAGTGGTTGAAGAT...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAATCCAAGGAGATCTTaGTATCCAGCTCATAAGCAC +
Preference number: 4 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWNPRRS*YPAHKH
Trigger: GTGCTTATGAGCTGGATATCAAGATCTCCTTGGATT...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTTAAAGACGGTGACGTaGAAGCGACAGGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQLKTVT*KRQVRE
Trigger: CTCCCTGACCTGTCGCTTTCACGTCACCGTCTTTAA...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCACTTTCAAATAGGTTTTaGCTTAAGGGCACACACTTT +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASLSNRF*LKGTHF
Trigger: AAAGTGTGTGCCCTTAAGTCAAAACCTATTTGAAAG...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTTGGTCTCCACAGCGCTaGAGTAGAAGAATTTGCCTT +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSWSPQR*SRRICL
Trigger: AAGGCAAATTCTTCTACTGCAGCGCTGTGGAGACCA...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGAGTCTCCAATTGGAATaGCAAGGGCTTGGCACACAA +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLSLQLE*QGLGTQ
Trigger: TTGTGTGCCAAGCCCTTGGCATTCCAATTGGAGACT...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAATCCTCGCACAGGCATTaGACAGTGCAGTTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQSSHRH*TVQLAV
Trigger: CACGGCCAACTGCACTGTGCAATGCCTGTGCGAGGA...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCACTGCCAGGTTGTCCGTaGACTTGCCGTTGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPLPGCP*TCRWGD
Trigger: GTCTCCCCAACGGCAAGTGCACGGACAACCTGGCAG...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTGCTTTCCAGGAACACTaGCAGGTTGTCCGTGCACTT +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSAFQEH*QVVRAL
Trigger: AAGTGCACGGACAACCTGGCAGTGTTCCTGGAAAGC...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTATTCTTGCAGGCGCTTaGATACCGGGCCACAGAGTC +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPILAGA*IPGHRV
Trigger: GACTCTGTGGCCCGGTATGCAAGCGCCTGCAAGAAT...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAGGTGCCCCTCAAAGTTaGAGCCACACTCACTCCGCG +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPGAPQS*SHTHSA
Trigger: CGCGGAGTGAGTGTGGCTGCAACTTTGAGGGGCACC...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTTTGGTGGCAAGTTGGTaGCCCTCAAAGTTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSLVASW*PSKLQP
Trigger: TGGCTGCAACTTTGAGGGGCACCAACTTGCCACCAA...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTTGTTGTCTGTGCCACTaGAATAGCAGAAGATCTGGC +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSCCLCH*NSRRSG
Trigger: GCCAGATCTTCTGCTATTGCAGTGGCACAGACAACA...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGGGCCACCTTCCTCCATaGAGTACTCATCATCCTTGC +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQGHLPP*STHHPC
Trigger: GCAAGGATGATGAGTACTGCATGGAGGAAGGTGGCC...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCATGCAGGAGGCGTCGGTaGGGGCTTGGCAGTAGTACA +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPCRRRR*GLGSST
Trigger: TGTACTACTGCCAAGCCCGCACCGACGCCTCCTGCA...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCAGTCTGAGCTTGGCCTaGTTCCTGTGGTGCACAGGA +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGSLSLA*FLWCTG
Trigger: TCCTGTGCACCACAGGAAGCAGGCCAAGCTCAGACT...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCACGGTCACGTCCACCTaGTTAACCCACAAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGTVTST*LTHKAS
Trigger: ACTGGCCTTGTGGGTTAAGCAGGTGGACGTGACCGT...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCCTCATTGACACTCGATaGAAGCAGACCCATGGGCAT +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLLIDTR*KQTHGH
Trigger: ATGCCCATGGGTCTGCTTGCATCGAGTGTCAATGAG...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTTGGGCTCGTAATATTTaGCATCGGAGTAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSWARNI*HRSSSR
Trigger: GCGGCTGCTACTCCGATGGCAAATATTACGAGCCCA...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAACTCCTCGTCTGACTTaGATTGGCGCGGGTCGCACT +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQTPRLT*IGAGRT
Trigger: AGTGCGACCCGCGCCAATGCAAGTCAGACGAGGAGT...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAGCTGTAGATTTTGGTTaGCAAACCAGTTATAAATGG +
Preference number: 4 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASAVDFG*QTSYKW
Trigger: CCATTTATAACTGGTTTGGCAACCAAAATCTACAGC...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTCCAGAAACCCCTCACTaGTGTAGATTTTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSPETPH*CRFWLP
Trigger: TGGCAACCAAAATCTACAGCAGTGAGGGGTTTCTGG...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCGCACACTTTGTTCTaGAGCCTCTCGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGPHTLF*SLSLML
Trigger: CAGCATCAGCGAGAGGCTGCAGAACAAAGTGTGCGG...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATGGCATCATTTTGAGATaGTGGACACTTTCAAATAGG +
Preference number: 4 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHGIILR*WTLSNR
Trigger: CCTATTTGAAAGTGTCCAGCATCTCAAAATGATGCC...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGTTTATATAGGAGCCTaGGACGGAAATGGAGGCGTA +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSVYIGA*DGNGGV
Trigger: TACGCCTCCATTTCCGTCCCAGGCTCCTATATAAAC...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGATTGCACAGTGCAGTTaGCCGTGGCCCAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQIAQCS*PWPRRT
Trigger: AGTTCTTCTGGGCCACGGCCAACTGCACTGTGCAAT...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTCAGTCACCACGCCCTTaGACTCCACTGTCGTACTGT +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPQSPRP*TPLSYC
Trigger: ACAGTACGACAGTGGAGTCCAAGGGCGTGGTGACTG...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGACTCGTCACTGGCGTTaGCATTGTAGAAGCCGCACA +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQTRHWR*HCRSRT
Trigger: TGTGCGGCTTCTACAATGCCAACGCCAGTGACGAGT...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCGACAGAACTCGTCACTaGCGTTGGCATTGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLDRTRH*RWHCRS
Trigger: GCTTCTACAATGCCAACGCCAGTGACGAGTTCTGTC...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAACCGTGCACTTGCCGTTaGGGAGACAGAACTCGTCAC +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQPCTCR*GDRTRH
Trigger: GTGACGAGTTCTGTCTCCCCAACGGCAAGTGCACGG...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAACGTTCACCACCCCATaGCACTCCAGGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQTFTTP*HSRKEL
Trigger: CAGCTCCTTCCTGGAGTGCCATGGGGTGGTGAACGT...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTAAAGTGGCTGTTCTCTaGGCACTCCAGTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPKVAVL*ALQWAE
Trigger: TTCTGCCCACTGGAGTGCCCAGAGAACAGCCACTTT...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCAGTGGGCAGCTGGTCTaGAAGTCAAAGGGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGSGQLV*KSKGKP
Trigger: TGGCTTCCCCTTTGACTTCCAGACCAGCTGCCCACT...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAGGTGCACAGGATGAGTaGGCAGCTGGTCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQGAQDE*AAGLEV
Trigger: GACTTCCAGACCAGCTGCCCACTCATCCTGTGCACC...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCACAGCTGCTGCACTTTaGAGAAACCTTCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLTAAAL*RNLPPW
Trigger: CCAAGGTGGAAGGTTTCTCCAAAGTGCAGCAGCTGT...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAGCAGTTTCTGGCAGATaGTGGACAGCACGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQAVSGR*WTARRR
Trigger: GCGCCTTCGTGCTGTCCACCATCTGCCAGAAACTGC...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCTTGGTTTTCCAGCTCTaGGCCAGCACCACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGLVFQL*ASTTLL
Trigger: AAGCAGCGTGGTGCTGGCCCAGAGCTGGAAAACCAA...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGCATTGCTATCTCGGGTaGGTGTGGCATAGCATTTGT +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLHCYLG*VWHSIC
Trigger: ACAAATGCTATGCCACACCCACCCGAGATAGCAATG...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAACCATTGGAGGCAGGTaGCATCATTTTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGTIGGR*HHFEML
Trigger: CAGCATCTCAAAATGATGCCACCTGCCTCCAATGGT...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTACCATTGGAGGCAGGTaGCATCATTTTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSTIGGR*HHFEML
Trigger: CAGCATCTCAAAATGATGCCACCTGCCTCCAATGGT...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTGGACCTTGGACCATTaGAGGCAGGTGGCATCATTT +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLWTLDH*RQVASF
Trigger: AAATGATGCCACCTGCCTCCAATGGTCCAAGGTCCA...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTCTGAAAGAGGAGCTTaGATGGTCGCTGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLSERGA*MVAGFW
Trigger: CCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGA...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGAGTAGATCTCATTGTTaGAATCCAGACAGCGGCACT +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLSRSHC*NPDSGT
Trigger: AGTGCCGCTGTCTGGATTTCAACAATGAGATCTACT...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGAGCTTCCTTTGGGGATaGGAATCTTGTAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLSFLWG*ESCSHS
Trigger: TGAATGGCTACAAGATTCTCATCCCCAAAGGAAGCT...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTCGGGCTTCTTCTTGTTaGTGTCGATTTCCAAGTACT +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSRASSC*CRFPST
Trigger: AGTACTTGGAAATCGACATCAACAAGAAGAAGCCCG...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGAGGTCTCTGTACATGTaGTGCACTCCTCAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQRSLYM*CTPQSG
Trigger: GCCACTTTGAGGAGTGCATCACATGTACAGAGACCT...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCTGCCCAAACTCATTaGCACTCGATGCAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPSAQTH*HSMQAD
Trigger: GTCTGCTTGCATCGAGTGTCAATGAGTTTGGGCAGA...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTCAGCTCATAAGCACATaGAAATTCCACATTGATCGT +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGQLIST*KFHIDR
Trigger: ACGATCAATGTGGAATTTTCATGTGCTTATGAGCTG...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGCAATGGTGTTATCTTTaGGGTTCTGACACCCTCCTT +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLQWCYL*GSDTLL
Trigger: AAGGAGGGTGTCAGAACCTCAAAGATAACACCATTG...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCTTAAAGACGGTGACGTaGAAGCGACAGGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGLKTVT*KRQVRE
Trigger: CTCCCTGACCTGTCGCTTTCACGTCACCGTCTTTAA...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGACCTAATAGGTCCCACTaGAATGATCTGTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGPNRSH*NDLFFG
Trigger: CCCAAAGAACAGATCATTTCAGTGGGACCTATTAGG...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGTCCAGACTTaGAGTTCCATTGAAGAATTA +
Preference number: 4 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWRSVQT*SSIEEL
Trigger: TAATTCTTCAATGGAACTTCAAGTCTGGACGCTTCT...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGAGAGGCTGGAGGAACTaGGTCAGAAATATTAAGCCA +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLRGWRN*VRNIKP
Trigger: TGGCTTAATATTTCTGACTCAGTTCCTCCAGCCTCT...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGACAGGTGGCATCATTTTaGGATGCTGGACACTTTCAA +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGQVASF*DAGHFQ
Trigger: TTGAAAGTGTCCAGCATCTCAAAATGATGCCACCTG...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTCCCCGTTTCATACTCTaGAAGAGGAGCTTGGATGGT +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPPRFIL*KRSLDG
Trigger: ACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGGG...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCACTGCCATGGCAAGGTTaGAGGACACAGTGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPLPWQG*RTQWVE
Trigger: CTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAG...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCGTTTTGGTGTCATTCTaGCAAAATGGATACATGAGC +
Preference number: 4 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCVLVSF*QNGYMS
Trigger: GCTCATGTATCCATTTTGGCAGAATGACACCAAAAC...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGATGCAGTAGAAGAATTTaGCTTTGGGTTCGCACACCT +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGCSRRI*LWVRTP
Trigger: AGGTGTGCGAACCCAAAGGCAAATTCTTCTACTGCA...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAATGTGTCGGGGCAGCTaGTTGTGCACACGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQMCRGS*LCTRSS
Trigger: ACTACTCCGTGTGCACAAGCAGCTGCCCCGACACAT...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAGCTCCGAGTCATTGTTaGAGGCCTTCAGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPAPSHC*RPSAGP
Trigger: GGGACCTGCTGAAGGCCTGCAACAATGACTCGGAGC...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTTGGTGGCAAGTTGGTaGCCCTCAAAGTTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPLVASW*PSKLQP
Trigger: TGGCTGCAACTTTGAGGGGCACCAACTTGCCACCAA...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCAGTACTCATCATCCTTaGAGGGAATGGTCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLSTHHP*REWSRS
Trigger: ACTGCGAGACCATTCCCTGCAAGGATGATGAGTACT...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAGTCTGAGCTTGGCCTaGTTCCTGTGGTGCACAGGA +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQSLSLA*FLWCTG
Trigger: TCCTGTGCACCACAGGAAGCAGGCCAAGCTCAGACT...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTCTCGGTGGATCACGATaGTGTAGCCAAACACGGTCA +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPLGGSR*CSQTRS
Trigger: TGACCGTGTTTGGCTACAGCATCGTGATCCACCGAG...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAGGTCATCATCAGGGTTaGCGTTGTAGCGGCCACACA +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQGHHQG*RCSGHT
Trigger: TGTGTGGCCGCTACAACGGCAACCCTGATGATGACC...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTCTCATTGACACTCGATaGAAGCAGACCCATGGGCAT +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSLIDTR*KQTHGH
Trigger: ATGCCCATGGGTCTGCTTGCATCGAGTGTCAATGAG...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGCTCATTGACACTCGATaGAAGCAGACCCATGGGCAT +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQLIDTR*KQTHGH
Trigger: ATGCCCATGGGTCTGCTTGCATCGAGTGTCAATGAG...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTCTCTTCACCCAGCTCTaGCCAAACTCATTGACACTC +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSLFTQL*PNSLTL
Trigger: GAGTGTCAATGAGTTTGGGCAGAGCTGGGTGAAGAG...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTAGTTCTGCAGCCAGCTaGAGGCGGTCTGCACCGCGC +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILSSAAS*RRSAPR
Trigger: GCGCGGTGCAGACCGCCTGCAGCTGGCTGCAGAACT...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCACCACGCAGTAGTGGCTaGAGTCACTCTTCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPPRSSG*SHSSGG
Trigger: TCCGCCTGAAGAGTGACTGCAGCCACTACTGCGTGG...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAAGCGGCAGCGCCGCGTaGAGTCGCTGTTCCAAAATA +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPSGSAA*SRCSKI
Trigger: TATTTTGGAACAGCGACTGCACGCGGCGCTGCCGCT...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAACCGCACACTTTGTTCTaGAGCCTCTCGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQPHTLF*SLSLML
Trigger: CAGCATCAGCGAGAGGCTGCAGAACAAAGTGTGCGG...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTAATCTTCCCCCTCGATaGCGGTGCACTGTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPNLPPR*RCTVCH
Trigger: ATGACAGACAGTGCACCGGCATCGAGGGGGAAGATT...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTATCGGAGCTTATCATTaGTATCTCGGGTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPIGAYH*YLGWVW
Trigger: CCACACCCACCCGAGATAGCAATGATAAGCTCCGAT...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTACAGGTCAGGGAGACTaGATTCTCCTCGATGCCAAT +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPTGQGD*ILLDAN
Trigger: ATTGGCATCGAGGAGAATGCAGTCTCCCTGACCTGT...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAACTCTTGCCGTCCTCCTaGAGGGTTCCTGTTACACAG +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQLLPSS*RVPVTQ
Trigger: CTGTGTAACAGGAACCCTGCAGGAGGACGGCAAGAG...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACTGTCTCCCAGCTGCCTaGCCCAGGGTAGAAGAGTGT +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNCLPAA*PRVEEC
Trigger: ACACTCTTCTACCCTGGGGCAGGCAGCTGGGAGACA...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645008.1
CDS-3UTR CCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCGATTCTGGCGTGAACTaGCTCACTAGCACATTGAAG +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLDSGVN*LTSTLK
Trigger: CTTCAATGTGCTAGTGAGCCAGTTCACGCCAGAATC...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGACGTTTGTGGTCTCCTaGATATTCACGATCTCGGGG +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQTFVVS*IFTISG
Trigger: CCCCGAGATCGTGAATATCCAGGAGACCACAAACGT...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGCCTGGGACGGAAATaGAGGCGTAGTGCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNSLGRK*RRSAGH
Trigger: ATGGCCAGCACTACGCCTCCATTTCCGTCCCAGGCT...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAACACTTCCAGTCTGCGTaGTACACACGCCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQHFQSA*YTRQLS
Trigger: AGAGAGCTGGCGTGTGTACCACGCAGACTGGAAGTG...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACACGTTCACCACCCCATaGCACTCCAGGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNTFTTP*HSRKEL
Trigger: CAGCTCCTTCCTGGAGTGCCATGGGGTGGTGAACGT...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAACCCAGAAGGTCTCATTaGTGGCAAGTTGGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQPRRSH*WQVGAP
Trigger: AGGGGCACCAACTTGCCACCAATGAGACCTTCTGGG...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAACATCCTTGCAGGGAATaGTCTCGCAGTGGACCCTGT +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQHPCRE*SRSGPC
Trigger: ACAGGGTCCACTGCGAGACCATTCCCTGCAAGGATG...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGTTTCCACCACCACGTaGAAGCCAAAGGAAAAGATA +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLVSTTT*KPKEKI
Trigger: TATCTTTTCCTTTGGCTTCCACGTGGTGGTGGAAAC...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCAGCGTTCTGGTTaGGGATCAGGCTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNRQRSG*GSGCTA
Trigger: AGCTGTGCAGCCTGATCCCCAACCAGAACGCTGCCT...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTCTCGTAATGGCTGTTTaGAGGGCAGGTGACAGTGCA +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPLVMAV*RAGDSA
Trigger: TGCACTGTCACCTGCCCTCCAAACAGCCATTACGAG...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTCACCCTGCATCTTCTaGATGTGCACATTGTCACAC +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLSPCIF*MCTLSH
Trigger: GTGTGACAATGTGCACATCCAGAAGATGCAGGGTGA...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTATGGACACTTCCATTTaGGCTGCTTTGCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSMDTSI*AALQVT
Trigger: GGTGACCTGCAAAGCAGCCCAAATGGAAGTGTCCAT...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTGTTGCCAGTGTTGTTaGCGCTTTCGATCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQCCQCC*RFRSRV
Trigger: CACTCTGGATCGAAAGCGCCAACAACACTGGCAACA...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAATGAAGCTGCCTTCTTaGGTTGGAACTGTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGMKLPS*VGTVRL
Trigger: TAACCTGACAGTTCCAACCCAAGAAGGCAGCTTCAT...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGCTTTTGTGTAATCTGTaGCAATCCTGGAATTGTGTG +
Preference number: 4 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWLLCNL*QSWNCV
Trigger: CACACAATTCCAGGATTGCCACAGATTACACAAAAG...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAAAGGAATTGTCCCCTTaGGGTGCAGCCATTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPKELSP*GAAIGW
Trigger: CCAGCCAATGGCTGCACCTCAAGGGGACAATTCCTT...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCAGGTCTCTGTACATGTaGTGCACTCCTCAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGRSLYM*CTPQSG
Trigger: GCCACTTTGAGGAGTGCATCACATGTACAGAGACCT...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTAGGTCTCTGTACATGTaGTGCACTCCTCAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPRSLYM*CTPQSG
Trigger: GCCACTTTGAGGAGTGCATCACATGTACAGAGACCT...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTGTAGTGGCCGTAGCCTaGGACGATGCAGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFVVAVA*DDAGGV
Trigger: GACGCCTCCTGCATCGTCTCAGGCTACGGCCACTAC...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTCGCACACTCCTCGTCTaGCTTGCATTGGCGCGGGTC +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILRTLLV*LALARV
Trigger: GACCCGCGCCAATGCAAGTCAGACGAGGAGTGTGCG...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTGTTCACAGGTGTGGTaGTGCTGCCTCCATAAAACG +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPCSQVW*CCLHKT
Trigger: CGTTTTATGGAGGCAGCAGCACCACACCTGTGAACA...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCTCCACCATTAAATCCTaGCTGTGCCATCACTCCACC +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGSTIKS*LCHHST
Trigger: GGTGGAGTGATGGCACAGGCAGGATTTAATGGTGGA...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTCCATCAACTTTAAATaGCCAGCGGCCTGGAACATT +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLSINFK*PAAWNI
Trigger: AATGTTCCAGGCCGCTGGGCATTTAAAGTTGATGGA...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAATTGTCCCCTTGAGGTaGAGCCATTGGCTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQIVPLR*SHWLGQ
Trigger: TTGACCCAGCCAATGGCTGCACCTCAAGGGGACAAT...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTTCGCAGCCGCACTTGTaGAGAGGGACGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFSQPHL*RGTHWL
Trigger: CAGCCAGTGCGTCCCTCTGCACAAGTGCGGCTGCGA...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCCCACACTCTCCATTaGAGATCTCCTCGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGPHTLH*RSPRKL
Trigger: CAACTTTCGAGGAGATCTGCAATGGAGAGTGTGGGG...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCGGACCCTGTTGTCTGTaGCACTGCAATAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGGPCCL*HCNSRR
Trigger: TCTTCTGCTATTGCAGTGGCACAGACAACAGGGTCC...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGTCTGAGCTTGGCCTaGTTCCTGTGGTGCACAGGA +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNSLSLA*FLWCTG
Trigger: TCCTGTGCACCACAGGAAGCAGGCCAAGCTCAGACT...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACACGGTCACGTCCACCTaGTTAACCCACAAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNTVTST*LTHKAS
Trigger: ACTGGCCTTGTGGGTTAAGCAGGTGGACGTGACCGT...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTTTTTTATACATGATATaGGTGCCATTGGACTGCACA +
Preference number: 4 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGFLYMI*VPLDCT
Trigger: TGTGCAGTCCAATGGCACGCATATCATGTATAAAAA...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCATCGGAGCTTATCATTaGTATCTCGGGTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGIGAYH*YLGWVW
Trigger: CCACACCCACCCGAGATAGCAATGATAAGCTCCGAT...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCATTCCTGTTACACAGCTaGAGAGAGGCCCATCCACCC +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPFLLHS*REAHPP
Trigger: GGGTGGATGGGCCTCTCTGCAGCTGTGTAACAGGAA...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCACTCTTGCCGTCCTCCTaGAGGGTTCCTGTTACACAG +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPLLPSS*RVPVTQ
Trigger: CTGTGTAACAGGAACCCTGCAGGAGGACGGCAAGAG...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTTCGTTGCAGCTCTTCTaGATGCCATTGGTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSSLQLF*MPLVFQ
Trigger: CTGGAAAACCAATGGCATGCAGAAGAGCTGCAACGA...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCGTTGCAGCTCTTCTaGATGCCATTGGTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPSLQLF*MPLVFQ
Trigger: CTGGAAAACCAATGGCATGCAGAAGAGCTGCAACGA...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTGCATACTGTGAGAACTaGAGCTCGTTGCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPAYCEN*SSLQLF
Trigger: GAAGAGCTGCAACGAGCTGCAGTTCTCACAGTATGC...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGGATTCTGGCGTGAACTaGCTCACTAGCACATTGAAG +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQDSGVN*LTSTLK
Trigger: CTTCAATGTGCTAGTGAGCCAGTTCACGCCAGAATC...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCAGGTGTTCACAGGTGTaGTGCTGCTGCCTCCATAAA +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGRCSQV*CCCLHK
Trigger: TTTATGGAGGCAGCAGCACCACACCTGTGAACACCT...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTAAAAGTGTGGTAGTGTaGCTCCCCAAACACCACGCA +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPKSVVV*LPKHHA
Trigger: TGCGTGGTGTTTGGGGAGCCACACTACCACACTTTT...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGGTTTATATAGGAGCCTaGGACGGAAATGGAGGCGTA +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQVYIGA*DGNGGV
Trigger: TACGCCTCCATTTCCGTCCCAGGCTCCTATATAAAC...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGCACAGAGTCCACAGGTaGAGTTTATATAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQHRVHR*SLYRSL
Trigger: CAGGCTCCTATATAAACTCCACCTGTGGACTCTGTG...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACTGTGCACAAAAGCAGTaGGGTCCACGACAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNCAQKQ*GPRQCH
Trigger: GTGGCACTGTCGTGGACCCCACTGCTTTTGTGCACA...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGTGGGCAGCTGGTCTaGAAGTCAAAGGGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNSGQLV*KSKGKP
Trigger: TGGCTTCCCCTTTGACTTCCAGACCAGCTGCCCACT...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCACAGCTGCTGCACTTTaGAGAAACCTTCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGTAAAL*RNLPPW
Trigger: CCAAGGTGGAAGGTTTCTCCAAAGTGCAGCAGCTGT...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCATTGGTTTTCCAGCTCTaGGCCAGCACCACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPLVFQL*ASTTLL
Trigger: AAGCAGCGTGGTGCTGGCCCAGAGCTGGAAAACCAA...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTTCACCCTGCATCTTCTaGATGTGCACATTGTCACAC +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSSPCIF*MCTLSH
Trigger: GTGTGACAATGTGCACATCCAGAAGATGCAGGGTGA...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCTGTTGCCAGTGTTGTTaGCGCTTTCGATCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGCCQCC*RFRSRV
Trigger: CACTCTGGATCGAAAGCGCCAACAACACTGGCAACA...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTACCATTGGAGGCAGGTaGCATCATTTTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPTIGGR*HHFEML
Trigger: CAGCATCTCAAAATGATGCCACCTGCCTCCAATGGT...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCTCTGAAAGAGGAGCTTaGATGGTCGCTGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGSERGA*MVAGFW
Trigger: CCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGA...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTCAACAATATCCCCAGTaGCCAAAGCTGCCATGGCAA +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPQQYPQ*PKLPWQ
Trigger: TTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTG...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCTGCCTCCATAAAACGTaGCTTCCTCCCATGTCACAA +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGCLHKT*LPPMSQ
Trigger: TTGTGACATGGGAGGAAGTCACGTTTTATGGAGGCA...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTTGCCGCAGGTCTTGTTaGAGCAGTAGACGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILCRRSC*SSRRPR
Trigger: GCGGGGACGTCTACTGCTTCAACAAGACCTGCGGCA...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGAGAAGCGTCCAGACTTaGAGTTCCATTGAAGAATTA +
Preference number: 4 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLRSVQT*SSIEEL
Trigger: TAATTCTTCAATGGAACTTCAAGTCTGGACGCTTCT...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAACCCCGTTTCATACTCTaGAAGAGGAGCTTGGATGGT +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQPRFIL*KRSLDG
Trigger: ACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGGG...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCCATCAACTTTAAATaGCCAGCGGCCTGGAACATT +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQSINFK*PAAWNI
Trigger: AATGTTCCAGGCCGCTGGGCATTTAAAGTTGATGGA...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTGGGAGGCTGGAAGTCTaGAAACACTGTCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILGRLEV*KHCRAS
Trigger: GCTGGCCCGACAGTGTTTGCAGACTTCCAGCCTCCC...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACCATTGTCCCTCACACTaGACAGGTCATACACGCAGC +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNHCPSH*TGHTRS
Trigger: GCTGCGTGTATGACCTGTGCAGTGTGAGGGACAATG...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCACAGCCAAGCAGGTCCTaGATCGGGCTTCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPQPSRS*IGLLLV
Trigger: AACAAGAAGAAGCCCGATGCAGGACCTGCTTGGCTG...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACCAGCCAAGCAGGTCCTaGATCGGGCTTCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNQPSRS*IGLLLV
Trigger: AACAAGAAGAAGCCCGATGCAGGACCTGCTTGGCTG...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAGCTTTCCAGGAACACTaGCAGGTTGTCCGTGCACTT +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPAFQEH*QVVRAL
Trigger: AAGTGCACGGACAACCTGGCAGTGTTCCTGGAAAGC...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTAGTACTCATCATCCTTaGAGGGAATGGTCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPSTHHP*REWSRS
Trigger: ACTGCGAGACCATTCCCTGCAAGGATGATGAGTACT...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCACTCGGTGGATCACGATaGTGTAGCCAAACACGGTCA +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPLGGSR*CSQTRS
Trigger: TGACCGTGTTTGGCTACAGCATCGTGATCCACCGAG...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAACTCTTCACCCAGCTCTaGCCAAACTCATTGACACTC +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQLFTQL*PNSLTL
Trigger: GAGTGTCAATGAGTTTGGGCAGAGCTGGGTGAAGAG...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTGAGGTCTCTTCTGCATaGCATTGGTTTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPEVSSA*HWFSSS
Trigger: AGAGCTGGAAAACCAATGGCATGCAGAAGAGACCTC...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392793.6
CDS-3UTR GCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCACCATTTGGGCTGCTTTaGAGGTCACCTCTGCATCGA +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPPFGLL*RSPLHR
Trigger: TCGATGCAGAGGTGACCTGCAAAGCAGCCCAAATGG...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCGCCAAAGAAGAAAACTaGGATGGCCAACTTAATCTC +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLAKEEN*DGQLNL
Trigger: GAGATTAAGTTGGCCATCCCAGTTTTCTTCTTTGGC...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAACAGGAGCCTTGGAAGTaGAAGAGGAAGCCGTCAAAA +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQQEPWK*KRKPSK
Trigger: TTTTGACGGCTTCCTCTTCCACTTCCAAGGCTCCTG...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCACAGAGTCCACAGGTaGAGTTTATATAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGHRVHR*SLYRSL
Trigger: CAGGCTCCTATATAAACTCCACCTGTGGACTCTGTG...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACGACACACACCCAGTCTaGGTTCGCCAGTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNDTHPV*VRQSPI
Trigger: AATTGGAGACTGGCGAACCCAGACTGGGTGTGTGTC...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTCAGTGCAGTTGGCCGTaGCCCAGAAGAACTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFQCSWP*PRRTPP
Trigger: TGGGGGAGTTCTTCTGGGCCACGGCCAACTGCACTG...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACCCTATGTCTGAGTACTaGACAGTCACCACGCCCTTG +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNPMSEY*TVTTPL
Trigger: CAAGGGCGTGGTGACTGTCCAGTACTCAGACATAGG...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCACCTATGTCTGAGTACTaGACAGTCACCACGCCCTTG +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPPMSEY*TVTTPL
Trigger: CAAGGGCGTGGTGACTGTCCAGTACTCAGACATAGG...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAGAAGGTCTCATTGGTaGCAAGTTGGTGCCCCTCAA +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQRRSHW*QVGAPQ
Trigger: TTGAGGGGCACCAACTTGCCACCAATGAGACCTTCT...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTTCCCCACAGCCCACCTaGCAGAAGGTGTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFSPQPT*QKVSLF
Trigger: GAAGAGGGACACCTTCTGCCAGGTGGGCTGTGGGGA...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAACAGCTGCTGCACTTTaGAGAAACCTTCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQTAAAL*RNLPPW
Trigger: CCAAGGTGGAAGGTTTCTCCAAAGTGCAGCAGCTGT...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAACTTTGCTGTGACACTTaGAGAAGGCAGCGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQLCCDT*RRQRSG
Trigger: ACCAGAACGCTGCCTTCTCCAAGTGTCACAGCAAAG...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCATTGCTATCTCGGGTaGGTGTGGCATAGCATTTGT +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGHCYLG*VWHSIC
Trigger: ACAAATGCTATGCCACACCCACCCGAGATAGCAATG...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAGAAAGGATTCTGGCGTaGACTGGCTCACTAGCACAT +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPERILA*TGSLAH
Trigger: ATGTGCTAGTGAGCCAGTTCACGCCAGAATCCTTTC...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGAATCCAAGGAGATCTTaGTATCCAGCTCATAAGCAC +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQNPRRS*YPAHKH
Trigger: GTGCTTATGAGCTGGATATCAAGATCTCCTTGGATT...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTTGGCATAGCATTTGTTaGGTGTTAGGATTAAATGTG +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSWHSIC*VLGLNV
Trigger: CACATTTAATCCTAACACTCAACAAATGCTATGCCA...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCAATGGTGTTATCTTTaGGGTTCTGACACCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGQWCYL*GSDTLL
Trigger: AAGGAGGGTGTCAGAACCTCAAAGATAACACCATTG...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTCTTTCAAATAGGTTTTaGCTTAAGGGCACACACTTT +
Preference number: 4 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSLSNRF*LKGTHF
Trigger: AAAGTGTGTGCCCTTAAGTCAAAACCTATTTGAAAG...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCAGTGGCCTTCAAATCTaGATTTCTCCTTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGSGLQI*ISPSGG
Trigger: ACCACCAGAAGGAGAAATTCAGATTTGAAGGCCACT...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645008.1
CDS-3UTR GCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCTTGGTGCTGTACAAGTaGGAAGATGAAAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGLVLYK*EDERDP
Trigger: TGGGTCTCTTTCATCTTCGCACTTGTACAGCACCAA...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTAGTGGCAGAGAAGGTTaGCATGTCTTTGAAGTACTT +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPSGREG*HVFEVL
Trigger: AAGTACTTCAAAGACATGGCAACCTTCTCTGCCACT...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCATGTTCACAGGTGTGGTaGTGCTGCCTCCATAAAACG +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPCSQVW*CCLHKT
Trigger: CGTTTTATGGAGGCAGCAGCACCACACCTGTGAACA...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCACCCCACACTCTCCATTaGAGATCTCCTCGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPPHTLH*RSPRKL
Trigger: CAACTTTCGAGGAGATCTGCAATGGAGAGTGTGGGG...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAATCAGGCTGCACAGCTaGTGCACTTTGGAGAAACCT +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPIRLHS*CTLEKP
Trigger: AGGTTTCTCCAAAGTGCAGCAGCTGTGCAGCCTGAT...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTCCGCGCCCCCATCGATaGAAGAGTCAAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILPRPHR*KSQTGS
Trigger: ACTGCCTGTTTGACTCTTGCATCGATGGGGGCGCGG...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTAGCGGCAGCGCCGCGTaGAGTCGCTGTTCCAAAATA +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILSGSAA*SRCSKI
Trigger: TATTTTGGAACAGCGACTGCACGCGGCGCTGCCGCT...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTCGCACTGAATCACGTTaGGACGGAAACAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFRTESR*DGNSGS
Trigger: GCTGCCGCTGTTTCCGTCGCAACGTGATTCAGTGCG...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTACTCCTCGTCTGACTTaGATTGGCGCGGGTCGCACT +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFTPRLT*IGAGRT
Trigger: AGTGCGACCCGCGCCAATGCAAGTCAGACGAGGAGT...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGTCAGGGAGACTaGATTCTCCTCGATGCCAAT +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPTGQGD*ILLDAN
Trigger: ATTGGCATCGAGGAGAATGCAGTCTCCCTGACCTGT...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCGGCATCATTTTGAGATaGTGGACACTTTCAAATAGG +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLGIILR*WTLSNR
Trigger: CCTATTTGAAAGTGTCCAGCATCTCAAAATGATGCC...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTCACATCTGCCCAAAATaGGGCGACGAAGGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFHICPK*GDEGSP
Trigger: GGGAGAGCCTTCGTCGCCCCATTTTGGGCAGATGTG...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACACGTTTGTGGTCTCCTaGATATTCACGATCTCGGGG +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNTFVVS*IFTISG
Trigger: CCCCGAGATCGTGAATATCCAGGAGACCACAAACGT...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAGGTGCAGCCATTGGCTaGGTCAATTTCCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPGAAIG*VNFLSI
Trigger: GATGGAAAGGAAATTGACCCAGCCAATGGCTGCACC...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTAGCCTGGGACGGAAATaGAGGCGTAGTGCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFSLGRK*RRSAGH
Trigger: ATGGCCAGCACTACGCCTCCATTTCCGTCCCAGGCT...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAGACAGAACTCGTCACTaGCGTTGGCATTGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPDRTRH*RWHCRS
Trigger: GCTTCTACAATGCCAACGCCAGTGACGAGTTCTGTC...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAAGAAGGTCTCATTGGTaGCAAGTTGGTGCCCCTCAA +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPRRSHW*QVGAPQ
Trigger: TTGAGGGGCACCAACTTGCCACCAATGAGACCTTCT...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCGTTTCCACCACCACGTaGAAGCCAAAGGAAAAGATA +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGVSTTT*KPKEKI
Trigger: TATCTTTTCCTTTGGCTTCCACGTGGTGGTGGAAAC...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTAGGCAGCGTTCTGGTTaGGGATCAGGCTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFRQRSG*GSGCTA
Trigger: AGCTGTGCAGCCTGATCCCCAACCAGAACGCTGCCT...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTGCACATTGTCACACATaGCTGCATACTGTGAGAACT +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPAHCHT*LHTVRT
Trigger: AGTTCTCACAGTATGCAGCCATGTGTGACAATGTGC...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTGCAGGACTCGTAGAATaGGAGGGGATCGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILAGLVE*EGIEKP
Trigger: GGGCTTCTCGATCCCCTCCCATTCTACGAGTCCTGC...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACTGTTGCCAGTGTTGTTaGCGCTTTCGATCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNCCQCC*RFRSRV
Trigger: CACTCTGGATCGAAAGCGCCAACAACACTGGCAACA...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCATGAAGCTGCCTTCTTaGGTTGGAACTGTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGMKLPS*VGTVRL
Trigger: TAACCTGACAGTTCCAACCCAAGAAGGCAGCTTCAT...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTTAGGATTAAATGTGTaGCGTCAGCTCCAACCACAA +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPLGLNV*RQLQPQ
Trigger: TTGTGGTTGGAGCTGACGCCACACATTTAATCCTAA...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGGATACTTTCCATAACTaGCTTGTAGAAGCCCCGTTT +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQDTFHN*LVEAPF
Trigger: AAACGGGGCTTCTACAAGCCAGTTATGGAAAGTATC...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGACTAGTGACAACTGTTTaGGAATTTTACACAAGAGAG +
Preference number: 4 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGLVTTV*EFYTRE
Trigger: CTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAG...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACGGCCCTAGAATTCCTTaGGCATGTTCCCCATCTTTC +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNGPRIP*ACSPSF
Trigger: GAAAGATGGGGAACATGCCCAAGGAATTCTAGGGCC...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645008.1
CDS-3UTR TCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACGGCTCACTAGCACATTaGAGGAAACAACTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNGSLAH*RKQLRC
Trigger: ACAACGGAGTTGTTTCCTTCAATGTGCTAGTGAGCC...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTAGCGGCCTGGAACATTaGCGTTTGTGGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILSGLEH*RLWSPG
Trigger: TCCAGGAGACCACAAACGTCAATGTTCCAGGCCGCT...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACTCCCCAAGTCTAAGGTaGCAGGCAAAGAAGTCACTA +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNSPSLR*QAKKSL
Trigger: TAGTGACTTCTTTGCCTGTCACCTTAGACTTGGGGA...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTAGCCCCCTGTGCAATTaGAGTATGTGGTGGACAGCC +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFSPLCN*SMWWTA
Trigger: GGCTGTCCACCACATACTTCAATTGCACAGGGGGCT...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTCTTGGGGAAAGAGTCTaGGCTTGGCCTGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFLGERV*AWPASC
Trigger: ACAGGAAGCAGGCCAAGCTCAGACTCTTTCCCCAAG...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGGTGTGTTTTTATACATaGTATGCGTGCCATTGGACT +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQVCFYT*YACHWT
Trigger: AGTCCAATGGCACGCATATCATGTATAAAAACACAC...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTGTGTGTTTTTATACATaGTATGCGTGCCATTGGACT +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSVCFYT*YACHWT
Trigger: AGTCCAATGGCACGCATATCATGTATAAAAACACAC...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTAATCCAAGGAGATCTTaGTATCCAGCTCATAAGCAC +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPNPRRS*YPAHKH
Trigger: GTGCTTATGAGCTGGATATCAAGATCTCCTTGGATT...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTGGCATAGCATTTGTTaGGTGTTAGGATTAAATGTG +
Preference number: 4 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLWHSIC*VLGLNV
Trigger: CACATTTAATCCTAACACTCAACAAATGCTATGCCA...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTACTGGTTTTTCATGTaGACCAAAGTCTCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQYWFFM*TKVSSD
Trigger: GTCACTAGAGACTTTGGTTCACATGAAAAACCAGTA...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTAGTGGCAGAGAAGGTTaGCATGTCTTTGAAGTACTT +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPSGREG*HVFEVL
Trigger: AAGTACTTCAAAGACATGGCAACCTTCTCTGCCACT...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACATTAAATCCTGCCTGTaGCATCACTCCACCAAGACC +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNIKSCL*HHSTKT
Trigger: GGTCTTGGTGGAGTGATGGCACAGGCAGGATTTAAT...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTCGGCTCGTGCAAATCTaGTCACACCCTCCATTGTCC +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILRLVQI*SHPPLS
Trigger: GGACAATGGAGGGTGTGAGCAGATTTGCACGAGCCG...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTTTCCTGTTACACAGCTaGAGAGAGGCCCATCCACCC +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILFLLHS*REAHPP
Trigger: GGGTGGATGGGCCTCTCTGCAGCTGTGTAACAGGAA...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCATGCAGCTCTTCTGCATaGCATTGGTTTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPCSSSA*HWFSSS
Trigger: AGAGCTGGAAAACCAATGGCATGCAGAAGAGCTGCA...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTGCCAAAGAAGAAAACTaGGATGGCCAACTTAATCTC +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPAKEEN*DGQLNL
Trigger: GAGATTAAGTTGGCCATCCCAGTTTTCTTCTTTGGC...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTCACTTCCAGTCTGCGTaGTACACACGCCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFHFQSA*YTRQLS
Trigger: AGAGAGCTGGCGTGTGTACCACGCAGACTGGAAGTG...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTCCCAGAAGGTCTCATTaGTGGCAAGTTGGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFPRRSH*WQVGAP
Trigger: AGGGGCACCAACTTGCCACCAATGAGACCTTCTGGG...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTCATCCTTGCAGGGAATaGTCTCGCAGTGGACCCTGT +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFHPCRE*SRSGPC
Trigger: ACAGGGTCCACTGCGAGACCATTCCCTGCAAGGATG...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTAGAAACCTTCCACCTTaGCACAGGACGGACAGCGGT +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILRNLPP*HRTDSG
Trigger: ACCGCTGTCCGTCCTGTGCCAAGGTGGAAGGTTTCT...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTGTTTCTGGCAGATGGTaGACAGCACGAAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILVSGRW*TARRRS
Trigger: ACTGCGCCTTCGTGCTGTCCACCATCTGCCAGAAAC...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAACTCTCAAAACCGAGCTaGAAGAGCTTGCACTTAGAT +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQLSKPS*KSLHLD
Trigger: ATCTAAGTGCAAGCTCTTCCAGCTCGGTTTTGAGAG...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTTAGGATTAAATGTGTaGCGTCAGCTCCAACCACAA +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPLGLNV*RQLQPQ
Trigger: TTGTGGTTGGAGCTGACGCCACACATTTAATCCTAA...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGCTTTTGTGTAATCTGTaGCAATCCTGGAATTGTGTG +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQLLCNL*QSWNCV
Trigger: CACACAATTCCAGGATTGCCACAGATTACACAAAAG...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCGATACTTTCCATAACTaGCTTGTAGAAGCCCCGTTT +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGDTFHN*LVEAPF
Trigger: AAACGGGGCTTCTACAAGCCAGTTATGGAAAGTATC...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTCAACTTAATCTCAGATaGGCTTCCATCATCTACTTT +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSQLNLR*ASIIYF
Trigger: AAAGTAGATGATGGAAGCTCATCTGAGATTAAGTTG...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCGTGTGTTTTTATACATaGTATGCGTGCCATTGGACT +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGVCFYT*YACHWT
Trigger: AGTCCAATGGCACGCATATCATGTATAAAAACACAC...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACGAAATAGCACTGGCTTaGCAGATTTCTCTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNEIALA*QISLVR
Trigger: TCTGACCAGAGAAATCTGTCAAGCCAGTGCTATTTC...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCGTTTTGGTGTCATTCTaGCAAAATGGATACATGAGC +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGVLVSF*QNGYMS
Trigger: GCTCATGTATCCATTTTGGCAGAATGACACCAAAAC...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTCACACAGACCATAGGTaGTGTTCTGCATGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFHTDHR*CSACSE
Trigger: CTCGGAGCATGCAGAACAGCACCTATGGTCTGTGTG...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTAGGCTGCACAGCTGCTaGACTTTGGAGAAACCTTCC +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFRLHSC*TLEKPS
Trigger: GGAAGGTTTCTCCAAAGTGCAGCAGCTGTGCAGCCT...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTAGGCTGCACAGCTGCTaGACTTTGGAGAAACCTTCC +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILRLHSC*TLEKPS
Trigger: GGAAGGTTTCTCCAAAGTGCAGCAGCTGTGCAGCCT...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTGCTGTAGATTTTGGTTaGCAAACCAGTTATAAATGG +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSAVDFG*QTSYKW
Trigger: CCATTTATAACTGGTTTGGCAACCAAAATCTACAGC...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGATGGCAGGCTCCATaGTCTCTCTGTAATAGATCT +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNRWQAP*SLCNRS
Trigger: AGATCTATTACAGAGAGACCATGGAGCCTGCCATCT...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTATTGCACAGTGCAGTTaGCCGTGGCCCAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFIAQCS*PWPRRT
Trigger: AGTTCTTCTGGGCCACGGCCAACTGCACTGTGCAAT...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTGATTTCCAAGTACTCTaGGCGCTCAGGGCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFDFQVL*ALRAGL
Trigger: AAGACCTGCCCTGAGCGCCCAGAGTACTTGGAAATC...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTACTCGTCACTGGCGTTaGCATTGTAGAAGCCGCACA +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFTRHWR*HCRSRT
Trigger: TGTGCGGCTTCTACAATGCCAACGCCAGTGACGAGT...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAAAGTTGATGATAAGCTaGAAGGAGATGTCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPKLMIS*KEMSGS
Trigger: ACTGCCCGACATCTCCTTCCAGCTTATCATCAACTT...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGCAAACCAGTTATAAATaGAACATTCACTTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQQTSYK*NIHLCA
Trigger: GGCACACAAGTGAATGTTCCATTTATAACTGGTTTG...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAGCACATTGTCACACATaGCTGCATACTGTGAGAACT +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPAHCHT*LHTVRT
Trigger: AGTTCTCACAGTATGCAGCCATGTGTGACAATGTGC...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTGCCATAATGAAATCTaGATCATGATGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPCHNEI*IMMRRS
Trigger: GCTTCTTCTCATCATGATCCAGATTTCATTATGGCA...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTATGGTCGCTGGTTTCTaGACCTTGGACCATTGGAGG +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILMVAGF*TLDHWR
Trigger: CCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCAT...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTAGCTTGGATGGTCGCTaGTTTCTGGACCTTGGACCA +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFSLDGR*FLDLGP
Trigger: TGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCT...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTTTCCTTCTTAATTTCTaGAGTTTTCGAGGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: RESNLPVITSKSFQQALSFLLNF*SFRGRV
Trigger: AACTCTCCCTCGAAAACTCCAGAAATTAAGAAGGAA...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645008.1
CDS-3UTR TCA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCAACTTAATCTCAGATaGGCTTCCATCATCTACTTT +
Preference number: 4 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGQLNLR*ASIIYF
Trigger: AAAGTAGATGATGGAAGCTCATCTGAGATTAAGTTG...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR TCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACGACTTGAAGTTCCATTaGAGAATTAGAGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNDLKFH*RIRGSA
Trigger: TGCAGAGCCTCTAATTCTTCAATGGAACTTCAAGTC...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTGGACCCTGTTGTCTGTaGCACTGCAATAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILGPCCL*HCNSRR
Trigger: TCTTCTGCTATTGCAGTGGCACAGACAACAGGGTCC...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTTGGCTCTTTTCAAGATaGCAGGCTCCATGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILWLFSR*QAPWSL
Trigger: GAGAGACCATGGAGCCTGCCATCTTGAAAAGAGCCA...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTGCCATAATGAAATCTaGATCATGATGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPCHNEI*IMMRRS
Trigger: GCTTCTTCTCATCATGATCCAGATTTCATTATGGCA...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTCTAGTGACAACTGTTTaGGAATTTTACACAAGAGAG +
Preference number: 4 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPLVTTV*EFYTRE
Trigger: CTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAG...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTCAACAATATCCCCAGTaGCCAAAGCTGCCATGGCAA +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILQQYPQ*PKLPWQ
Trigger: TTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTG...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACCAGCTCATAAGCACATaGAAATTCCACATTGATCGT +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNQLIST*KFHIDR
Trigger: ACGATCAATGTGGAATTTTCATGTGCTTATGAGCTG...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGAAGCGTCCAGACTTaGAGTTCCATTGAAGAATTA +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNRSVQT*SSIEEL
Trigger: TAATTCTTCAATGGAACTTCAAGTCTGGACGCTTCT...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACTACTGGTTTTTCATGTaGACCAAAGTCTCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNYWFFM*TKVSSD
Trigger: GTCACTAGAGACTTTGGTTCACATGAAAAACCAGTA...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTTGGTCTCCACAGCGCTaGAGTAGAAGAATTTGCCTT +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFWSPQR*SRRICL
Trigger: AAGGCAAATTCTTCTACTGCAGCGCTGTGGAGACCA...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTTGTTGTCTGTGCCACTaGAATAGCAGAAGATCTGGC +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFCCLCH*NSRRSG
Trigger: GCCAGATCTTCTGCTATTGCAGTGGCACAGACAACA...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTTGCAGCTCTTCTGCATaGCATTGGTTTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFCSSSA*HWFSSS
Trigger: AGAGCTGGAAAACCAATGGCATGCAGAAGAGCTGCA...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAACTAGTGACAACTGTTTaGGAATTTTACACAAGAGAG +
Preference number: 4 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQLVTTV*EFYTRE
Trigger: CTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAG...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACTGGCATAGCATTTGTTaGGTGTTAGGATTAAATGTG +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNWHSIC*VLGLNV
Trigger: CACATTTAATCCTAACACTCAACAAATGCTATGCCA...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTCAATGGTGTTATCTTTaGGGTTCTGACACCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFQWCYL*GSDTLL
Trigger: AAGGAGGGTGTCAGAACCTCAAAGATAACACCATTG...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTTTGGTGCTGTACAAGTaGGAAGATGAAAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFLVLYK*EDERDP
Trigger: TGGGTCTCTTTCATCTTCGCACTTGTACAGCACCAA...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTTGCAGTAGAAGAATTTaGCTTTGGGTTCGCACACCT +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILCSRRI*LWVRTP
Trigger: AGGTGTGCGAACCCAAAGGCAAATTCTTCTACTGCA...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR GCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAGCTGTAGATTTTGGTTaGCAAACCAGTTATAAATGG +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPAVDFG*QTSYKW
Trigger: CCATTTATAACTGGTTTGGCAACCAAAATCTACAGC...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTTGCATCTTCTGGATGTaGACATTGTCACACATGGCT +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFCIFWM*TLSHMA
Trigger: AGCCATGTGTGACAATGTGCACATCCAGAAGATGCA...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTAGATGGCAGGCTCCATaGTCTCTCTGTAATAGATCT +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILRWQAP*SLCNRS
Trigger: AGATCTATTACAGAGAGACCATGGAGCCTGCCATCT...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CCA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACCAAACCAGTTATAAATaGAACATTCACTTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNQTSYK*NIHLCA
Trigger: GGCACACAAGTGAATGTTCCATTTATAACTGGTTTG...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTGCTGCCTTCTTGGGTTaGAACTGTCAGGTTAATTAC +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFAAFLG*NCQVNY
Trigger: GTAATTAACCTGACAGTTCCAACCCAAGAAGGCAGC...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTGCTGCCTTCTTGGGTTaGAACTGTCAGGTTAATTAC +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILAAFLG*NCQVNY
Trigger: GTAATTAACCTGACAGTTCCAACCCAAGAAGGCAGC...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCATGCCATAATGAAATCTaGATCATGATGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPCHNEI*IMMRRS
Trigger: GCTTCTTCTCATCATGATCCAGATTTCATTATGGCA...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTATCTTCAACCACTCCTaGGCAATTCTCCTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFIFNHS*AILLLN
Trigger: ATTGAGAAGGAGAATTGCTCAGGAGTGGTTGAAGAT...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTATCTTCAACCACTCCTaGGCAATTCTCCTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILIFNHS*AILLLN
Trigger: ATTGAGAAGGAGAATTGCTCAGGAGTGGTTGAAGAT...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTGATACTTTCCATAACTaGCTTGTAGAAGCCCCGTTT +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILDTFHN*LVEAPF
Trigger: AAACGGGGCTTCTACAAGCCAGTTATGGAAAGTATC...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR TCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTTACTGGTTTTTCATGTaGACCAAAGTCTCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILYWFFM*TKVSSD
Trigger: GTCACTAGAGACTTTGGTTCACATGAAAAACCAGTA...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTAATCCTGGAATTGTGTaGGCAAGTGATTTTACAGGA +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILNPGIV*ASDFTG
Trigger: TCCTGTAAAATCACTTGCCCACACAATTCCAGGATT...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTCTTTTGTGTAATCTGTaGCAATCCTGGAATTGTGTG +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILLLCNL*QSWNCV
Trigger: CACACAATTCCAGGATTGCCACAGATTACACAAAAG...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR GCA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTTTTTTATACATGATATaGGTGCCATTGGACTGCACA +
Preference number: 4 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFFLYMI*VPLDCT
Trigger: TGTGCAGTCCAATGGCACGCATATCATGTATAAAAA...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
37% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CCA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTCAAACCAGTTATAAATaGAACATTCACTTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: EPKSLVTTVWEFYTREILQTSYK*NIHLCA
Trigger: GGCACACAAGTGAATGTTCCATTTATAACTGGTTTG...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS CCA 90 bp CACTTGTGCAGAGGGACGCACTGGCTGGTGCTGAGGACGAAGCCCTaGTTGCACTCGCAGCCCTCTGTGCACGGCGTGGCGCAGTTCCGC +
Preference number: 5 (lower is better)
Translates to: HLCRGTHWLVLRTKP*LHSQPSVHGVAQFR
Trigger: GCGGAACTGCGCCACGCCGTGCACAGAGGGCTGCGAGTGCAACCAGGGCTTCGTCCTCAGCACCAGCCAGTGCGTCCCTCTGCACAAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS TCA 90 bp AGGCGTAGGAGGCGCCGTCAAAGGTGTGCAGCACCTGGTTCTGGCTaGGCAGGCACACGGTCTCCCGCTTGGGGAAGCAGCCCTGGTAGC +
Preference number: 5 (lower is better)
Translates to: RRRRRRQRCAAPGSG*AGTRSPAWGSSPGS
Trigger: GCTACCAGGGCTGCTTCCCCAAGCGGGAGACCGTGTGCCTGCTCAGCCAGAACCAGGTGCTGCACACCTTTGACGGCGCCTCCTACGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS TCA 90 bp CGCAGCGCACACTCCTCGTCTGACTTGCATTGGCGCGGGTCGCACTaGATCACGTTGCGACGGAAACAGCGGCAGCGCCGCGTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: RSAHSSSDLHWRGSH*ITLRRKQRQRRVQS
Trigger: CGACTGCACGCGGCGCTGCCGCTGTTTCCGTCGCAACGTGATTCAGTGCGACCCGCGCCAATGCAAGTCAGACGAGGAGTGTGCGCTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS-3UTR CAA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCCAGCCGCGCACCCCGTaGCGCAGCGCACACTCCTCG +
Preference number: 5 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSQPRTP*RSAHSS
Trigger: CGAGGAGTGTGCGCTGCGCAACGGGGTGCGCGGCTG...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS TCA 90 bp GCTGAAGCAGCCGCGCACCCCGTTGCGCAGCGCACACTCCTCGTCTaGCTTGCATTGGCGCGGGTCGCACTGAATCACGTTGCGACGGAA +
Preference number: 5 (lower is better)
Translates to: AEAAAHPVAQRTLLV*LALARVALNHVATE
Trigger: TTCCGTCGCAACGTGATTCAGTGCGACCCGCGCCAATGCAAGTCAGACGAGGAGTGTGCGCTGCGCAACGGGGTGCGCGGCTGCTTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS GCA 90 bp AGCAGCCGCGCACCCCGTTGCGCAGCGCACACTCCTCGTCTGACTTaGATTGGCGCGGGTCGCACTGAATCACGTTGCGACGGAAACAGC +
Preference number: 5 (lower is better)
Translates to: SSRAPRCAAHTPRLT*IGAGRTESRCDGNS
Trigger: GCTGTTTCCGTCGCAACGTGATTCAGTGCGACCCGCGCCAATGCAAGTCAGACGAGGAGTGTGCGCTGCGCAACGGGGTGCGCGGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CCA 90 bp GACAGCCCTCCACGCAGTAGTGGCTGCAGTCACTCTTCAGGCGGATaGCGGCGCAGCGGGGCTGGCAGACACTCACGCAGCTCTCGTAAT +
Preference number: 5 (lower is better)
Translates to: DSPPRSSGCSHSSGG*RRSGAGRHSRSSRN
Trigger: ATTACGAGAGCTGCGTGAGTGTCTGCCAGCCCCGCTGCGCCGCCATCCGCCTGAAGAGTGACTGCAGCCACTACTGCGTGGAGGGCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS-3UTR CAA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATCAGCCGCGCACCCCGTaGCGCAGCGCACACTCCTCG +
Preference number: 5 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHQPRTP*RSAHSS
Trigger: CGAGGAGTGTGCGCTGCGCAACGGGGTGCGCGGCTG...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS CCA 90 bp CGTCCCCGCCCTCCTCGCACAGGCATTGCACAGTGCAGTTGGCCGTaGCCCAGAAGAACTCCCCCATGGTGTAGTAGTGGCCGTCGAAGT +
Preference number: 5 (lower is better)
Translates to: RPRPPRTGIAQCSWP*PRRTPPWCSSGRRS
Trigger: ACTTCGACGGCCACTACTACACCATGGGGGAGTTCTTCTGGGCCACGGCCAACTGCACTGTGCAATGCCTGTGCGAGGAGGGCGGGGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS TCA 90 bp CGGAGCATGTGTCGGGGCAGCTGCTTGTGCACACGGAGTAGTGGCTaGAGCTCGGGCACTGCACTGTGGACACACACCCAGTCTGGGTTC +
Preference number: 5 (lower is better)
Translates to: RSMCRGSCLCTRSSG*SSGTALWTHTQSGF
Trigger: GAACCCAGACTGGGTGTGTGTCCACAGTGCAGTGCCCGAGCTTCAGCCACTACTCCGTGTGCACAAGCAGCTGCCCCGACACATGCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 90 bp CTGCGTGGTACACACGCCAGCTCTCTCCCAGATCCAGGACAGACATaGCCGGCCTGCCATCCGGGCGGAGGAAGTCATCCAGTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: LRGTHASSLPDPGQT*PACHPGGGSHPVGF
Trigger: AAAACCCACTGGATGACTTCCTCCGCCCGGATGGCAGGCCGGCCATGTCTGTCCTGGATCTGGGAGAGAGCTGGCGTGTGTACCACGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 90 bp TGGGTGCAGTTGTCGACGCAGCCGGAGTCGCACTTCCAGTCTGCGTaGTACACACGCCAGCTCTCTCCCAGATCCAGGACAGACATGGCC +
Preference number: 5 (lower is better)
Translates to: WVQLSTQPESHFQSA*YTRQLSPRSRTDMA
Trigger: GGCCATGTCTGTCCTGGATCTGGGAGAGAGCTGGCGTGTGTACCACGCAGACTGGAAGTGCGACTCCGGCTGCGTCGACAACTGCACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 90 bp AGTAGACGTCCCCGCCCTCCTCGCACAGGCATTGCACAGTGCAGTTaGCCGTGGCCCAGAAGAACTCCCCCATGGTGTAGTAGTGGCCGT +
Preference number: 5 (lower is better)
Translates to: SRRPRPPRTGIAQCS*PWPRRTPPWCSSGR
Trigger: ACGGCCACTACTACACCATGGGGGAGTTCTTCTGGGCCACGGCCAACTGCACTGTGCAATGCCTGTGCGAGGAGGGCGGGGACGTCTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 90 bp CCTTCCACCTTGGCACAGGACGGACAGCGGTCCCCACAGCCCACCTaGCAGAAGGTGTCCCTCTTCACCCAGCTCTGCCCAAACTCATTG +
Preference number: 5 (lower is better)
Translates to: PSTLAQDGQRSPQPT*QKVSLFTQLCPNSL
Trigger: CAATGAGTTTGGGCAGAGCTGGGTGAAGAGGGACACCTTCTGCCAGGTGGGCTGTGGGGACCGCTGTCCGTCCTGTGCCAAGGTGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000478058.1
ENST00000642222.1
ENST00000645008.1
CDS CCA 90 bp GGATCAGGCTGCACAGCTGCTGCACTTTGGAGAAACCTTCCACCTTaGCACAGGACGGACAGCGGTCCCCACAGCCCACCTGGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: GSGCTAAALWRNLPP*HRTDSGPHSPPGRR
Trigger: CCTTCTGCCAGGTGGGCTGTGGGGACCGCTGTCCGTCCTGTGCCAAGGTGGAAGGTTTCTCCAAAGTGCAGCAGCTGTGCAGCCTGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000478058.1
ENST00000642222.1
ENST00000645008.1
CDS CCA 90 bp TGCAGCCACACAGCTCCCTGCCATTGCCCAGCTCGCAAGTTCGGTTaGGACAGTCCGCCCCCACACAGGGATCTTCAACCACTCCTGAGC +
Preference number: 5 (lower is better)
Translates to: CSHTAPCHCPARKFG*DSPPPHRDLQPLLS
Trigger: GCTCAGGAGTGGTTGAAGATCCCTGTGTGGGGGCGGACTGTCCCAACCGAACTTGCGAGCTGGGCAATGGCAGGGAGCTGTGTGGCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS GCA 90 bp GCACTGGGTGCAGTTGTCGACGCAGCCGGAGTCGCACTTCCAGTCTaGGTGGTACACACGCCAGCTCTCTCCCAGATCCAGGACAGACAT +
Preference number: 5 (lower is better)
Translates to: ALGAVVDAAGVALPV*VVHTPALSQIQDRH
Trigger: ATGTCTGTCCTGGATCTGGGAGAGAGCTGGCGTGTGTACCACGCAGACTGGAAGTGCGACTCCGGCTGCGTCGACAACTGCACCCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 90 bp AGTCAGAGCCAAAGTAGAGGGCTTCAGTGGCAGCGTCGCACTGGGTaGAGTTGTCGACGCAGCCGGAGTCGCACTTCCAGTCTGCGTGGT +
Preference number: 5 (lower is better)
Translates to: SQSQSRGLQWQRRTG*SCRRSRSRTSSLRG
Trigger: ACCACGCAGACTGGAAGTGCGACTCCGGCTGCGTCGACAACTGCACCCAGTGCGACGCTGCCACTGAAGCCCTCTACTTTGGCTCTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 90 bp AGAAGTCATAGGTCCGCCAGGGCCCCACCTCCACGTCCGCATTCTTaGAGGCGCTTGCATACCGGGCCACAGAGTCACAGAGCTCTGACT +
Preference number: 5 (lower is better)
Translates to: RSHRSARAPPPRPHS*RRLHTGPQSHRALT
Trigger: AGTCAGAGCTCTGTGACTCTGTGGCCCGGTATGCAAGCGCCTGCAAGAATGCGGACGTGGAGGTGGGGCCCTGGCGGACCTATGACTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS GCA 90 bp ACTCCTCGTCTGACTTGCATTGGCGCGGGTCGCACTGAATCACGTTaGGACGGAAACAGCGGCAGCGCCGCGTGCAGTCGCTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: TPRLTCIGAGRTESR*DGNSGSAACSRCSK
Trigger: TTTGGAACAGCGACTGCACGCGGCGCTGCCGCTGTTTCCGTCGCAACGTGATTCAGTGCGACCCGCGCCAATGCAAGTCAGACGAGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS GCA 90 bp CTCTGCAGCTCTTGCCGTCCTCCTGCAGGGTTCCTGTTACACAGCTaGAGAGAGGCCCATCCACCCGGCTCGTGCAAATCTGCTCACACC +
Preference number: 5 (lower is better)
Translates to: LCSSCRPPAGFLLHS*REAHPPGSCKSAHT
Trigger: GGTGTGAGCAGATTTGCACGAGCCGGGTGGATGGGCCTCTCTGCAGCTGTGTAACAGGAACCCTGCAGGAGGACGGCAAGAGCTGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS GCA 90 bp CCCAGGGTAGAAGAGTGTCTACCTCTGCAGCTCTTGCCGTCCTCCTaGAGGGTTCCTGTTACACAGCTGCAGAGAGGCCCATCCACCCGG +
Preference number: 5 (lower is better)
Translates to: PRVEECLPLQLLPSS*RVPVTQLQRGPSTR
Trigger: CCGGGTGGATGGGCCTCTCTGCAGCTGTGTAACAGGAACCCTGCAGGAGGACGGCAAGAGCTGCAGAGGTAGACACTCTTCTACCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645008.1
CDS CCA 90 bp GGCATTGCACAGTGCAGTTGGCCGTGGCCCAGAAGAACTCCCCCATaGTGTAGTAGTGGCCGTCGAAGTCGCAGCCGCACTTGTGCAGAG +
Preference number: 5 (lower is better)
Translates to: GIAQCSWPWPRRTPP*CSSGRRSRSRTCAE
Trigger: CTCTGCACAAGTGCGGCTGCGACTTCGACGGCCACTACTACACCATGGGGGAGTTCTTCTGGGCCACGGCCAACTGCACTGTGCAATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 90 bp CTGGGGGCAAGAGGTCTCTTCTGCATGCCATTGGTTTTCCAGCTCTaGGCCAGCACCACGCTGCTTACCACCGGCTTCCCTCGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: LGARGLFCMPLVFQL*ASTTLLTTGFPRKV
Trigger: GACCTTGCGAGGGAAGCCGGTGGTAAGCAGCGTGGTGCTGGCCCAGAGCTGGAAAACCAATGGCATGCAGAAGAGACCTCTTGCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264037.2
ENST00000392793.6
CDS-3UTR CAA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCAAGTCGCAGCCGCACTaGTGCAGAGGGACGCACTGG +
Preference number: 5 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSKSQPH*CRGTHW
Trigger: CCAGTGCGTCCCTCTGCACAAGTGCGGCTGCGACTT...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCGGCGTCGGTGCGGGCTaGGCAGTAGTACAGGCCACC +
Preference number: 5 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCGVGAG*AVVQAT
Trigger: GGTGGCCTGTACTACTGCCAAGCCCGCACCGACGCC...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGACAGCCGCGCACCCCGTaGCGCAGCGCACACTCCTCG +
Preference number: 5 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGQPRTP*RSAHSS
Trigger: CGAGGAGTGTGCGCTGCGCAACGGGGTGCGCGGCTG...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCACACAGCTCCCTGCCATaGCCCAGCTCGCAAGTTCGG +
Preference number: 5 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASHSSLP*PSSQVR
Trigger: CCGAACTTGCGAGCTGGGCAATGGCAGGGAGCTGTG...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS GCA 90 bp AGGCGTCGGTGCGGGCTTGGCAGTAGTACAGGCCACCTTCCTCCATaGAGTACTCATCATCCTTGCAGGGAATGGTCTCGCAGTGGACCC +
Preference number: 5 (lower is better)
Translates to: RRRCGLGSSTGHLPP*STHHPCREWSRSGP
Trigger: GGGTCCACTGCGAGACCATTCCCTGCAAGGATGATGAGTACTGCATGGAGGAAGGTGGCCTGTACTACTGCCAAGCCCGCACCGACGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS GCA 90 bp GGGTTCCTGTTACACAGCTGCAGAGAGGCCCATCCACCCGGCTCGTaGAAATCTGCTCACACCCTCCATTGTCCTCACACCAGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: GFLLHSCREAHPPGS*KSAHTLHCPHTSPA
Trigger: GGCTGGACTGGTGTGAGGACAATGGAGGGTGTGAGCAGATTTGCACGAGCCGGGTGGATGGGCCTCTCTGCAGCTGTGTAACAGGAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CCA 90 bp CCCTCACACTGCACAGGTCATACACGCAGCTGTGCACAAAAGCAGTaGGGTCCACGACAGTGCCACACTCCCACAGAGGGCCGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: PSHCTGHTRSCAQKQ*GPRQCHTPTEGRLS
Trigger: AGACAGACGGCCCTCTGTGGGAGTGTGGCACTGTCGTGGACCCCACTGCTTTTGTGCACAGCTGCGTGTATGACCTGTGCAGTGTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 90 bp TTCAACTTGACTTCCGAAGCCCCGATGCCTCCTATCTTGACCTCCTaGTCGGCCACCAGGATCCGAAGTCCCCGCAGCCAAGCAGGTCCT +
Preference number: 5 (lower is better)
Translates to: FNLTSEAPMPPILTS*SATRIRSPRSQAGP
Trigger: AGGACCTGCTTGGCTGCGGGGACTTCGGATCCTGGTGGCCGACCAGGAGGTCAAGATAGGAGGCATCGGGGCTTCGGAAGTCAAGTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 90 bp TGCAGCTCGTTGCAGCTCTTCTGCATGCCATTGGTTTTCCAGCTCTaGGCCAGCACCACGCTGCTTACCACCGGCTTCCCTCGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: CSSLQLFCMPLVFQL*ASTTLLTTGFPRKV
Trigger: GACCTTGCGAGGGAAGCCGGTGGTAAGCAGCGTGGTGCTGGCCCAGAGCTGGAAAACCAATGGCATGCAGAAGAGCTGCAACGAGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS-3UTR CAA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCTCGCACTGGGTGCAGTaGTCGACGCAGCCGGAGTCG +
Preference number: 5 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCSHWVQ*STQPES
Trigger: CGACTCCGGCTGCGTCGACAACTGCACCCAGTGCGA...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCCTGTTGGAGGGGTCGTaGATGATGCCGCACCTGGAG +
Preference number: 5 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSLLEGS*MMPHLE
Trigger: CTCCAGGTGCGGCATCATCAACGACCCCTCCAACAG...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATCCACGTCCGCATTCTaGCAGGCGCTTGCATACCGG +
Preference number: 5 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASSTSAF*QALAYR
Trigger: CCGGTATGCAAGCGCCTGCAAGAATGCGGACGTGGA...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCCTACCTCTGCAGCTCTaGCCGTCCTCCTGCAGGGTT +
Preference number: 5 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSLPLQL*PSSCRV
Trigger: AACCCTGCAGGAGGACGGCAAGAGCTGCAGAGGTAG...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645008.1
CDS TCA 90 bp GGTCCACGACAGTGCCACACTCCCACAGAGGGCCGTCTGTCTTGTTaGGGAAGCCGCAGTAGTCAGAGCCAAAGTAGAGGGCTTCAGTGG +
Preference number: 5 (lower is better)
Translates to: GPRQCHTPTEGRLSC*GSRSSQSQSRGLQW
Trigger: CCACTGAAGCCCTCTACTTTGGCTCTGACTACTGCGGCTTCCTCAACAAGACAGACGGCCCTCTGTGGGAGTGTGGCACTGTCGTGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 90 bp TGGCAGTCCAGGTCCACCCAGAAGGTCTCATTGGTGGCAAGTTGGTaGCCCTCAAAGTTGCAGCCACACTCACTCCGCGTGACACACTGG +
Preference number: 5 (lower is better)
Translates to: WQSRSTQKVSLVASW*PSKLQPHSLRVTHW
Trigger: CCAGTGTGTCACGCGGAGTGAGTGTGGCTGCAACTTTGAGGGGCACCAACTTGCCACCAATGAGACCTTCTGGGTGGACCTGGACTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS GCA 90 bp TCCCCACAGCCCACCTGGCAGAAGGTGTCCCTCTTCACCCAGCTCTaGCCAAACTCATTGACACTCGATGCAAGCAGACCCATGGGCATC +
Preference number: 5 (lower is better)
Translates to: SPQPTWQKVSLFTQL*PNSLTLDASRPMGI
Trigger: GATGCCCATGGGTCTGCTTGCATCGAGTGTCAATGAGTTTGGGCAGAGCTGGGTGAAGAGGGACACCTTCTGCCAGGTGGGCTGTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000478058.1
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCCCGATGCCTCCTATCTaGACCTCCTGGTCGGCCACC +
Preference number: 5 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCPMPPI*TSWSAT
Trigger: GGTGGCCGACCAGGAGGTCAAGATAGGAGGCATCGG...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCTCCGTGCACTTGCCGTaGGGGAGACAGAACTCGTCA +
Preference number: 5 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSSVHLP*GRQNSS
Trigger: TGACGAGTTCTGTCTCCCCAACGGCAAGTGCACGGA...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCCATTCTTGCAGGCGCTaGCATACCGGGCCACAGAGT +
Preference number: 5 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSHSCRR*HTGPQS
Trigger: ACTCTGTGGCCCGGTATGCAAGCGCCTGCAAGAATG...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCACATTCTTGCAGGCGCTaGCATACCGGGCCACAGAGT +
Preference number: 5 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASHSCRR*HTGPQS
Trigger: ACTCTGTGGCCCGGTATGCAAGCGCCTGCAAGAATG...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATTGGTGCCCCTCAAAGTaGCAGCCACACTCACTCCGC +
Preference number: 5 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHWCPSK*QPHSLR
Trigger: GCGGAGTGAGTGTGGCTGCAACTTTGAGGGGCACCA...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAACCCAGAAGGTCTCATaGGTGGCAAGTTGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASTQKVS*VASWCP
Trigger: GGGGCACCAACTTGCCACCAATGAGACCTTCTGGGT...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGGAAAGAGTCTGAGCTaGGCCTGCTTCCTGTGGTGC +
Preference number: 5 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSGKSLS*ACFLWC
Trigger: GCACCACAGGAAGCAGGCCAAGCTCAGACTCTTTCC...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTCACTCCTCGTCTGACTaGCATTGGCGCGGGTCGCAC +
Preference number: 5 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGHSSSD*HWRGSH
Trigger: GTGCGACCCGCGCCAATGCAAGTCAGACGAGGAGTG...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGAAATGATGGTGAGGTaGGGGGCCGACCACTTGTCG +
Preference number: 5 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSEMMVR*GADHLS
Trigger: CGACAAGTGGTCGGCCCCCAACCTCACCATCATTTC...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCCAGAGACCGCACACTTaGTTCTGCAGCCTCTCGCTG +
Preference number: 5 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSQRPHT*FCSLSL
Trigger: CAGCGAGAGGCTGCAGAACAAAGTGTGCGGTCTCTG...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATGCTCACACCCTCCATaGTCCTCACACCAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASCSHPP*SSHQSS
Trigger: GCTGGACTGGTGTGAGGACAATGGAGGGTGTGAGCA...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS TCA 90 bp TGGCAAGTTGGTGCCCCTCAAAGTTGCAGCCACACTCACTCCGCGTaGCACACTGGCTGCCCAGTAGAGCATAGCCCTCATCACACTGAC +
Preference number: 5 (lower is better)
Translates to: WQVGAPQSCSHTHSA*HTGCPVEHSPHHTD
Trigger: GTCAGTGTGATGAGGGCTATGCTCTACTGGGCAGCCAGTGTGTCACGCGGAGTGAGTGTGGCTGCAACTTTGAGGGGCACCAACTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS GCA 90 bp AGTGTGGCTCCCCAAACACCACGCATGTGCTGGTCTCCACAGCGCTaGAGTAGAAGAATTTGCCTTTGGGTTCGCACACCTCGTAGGGGC +
Preference number: 5 (lower is better)
Translates to: SVAPQTPRMCWSPQR*SRRICLWVRTPRRG
Trigger: GCCCCTACGAGGTGTGCGAACCCAAAGGCAAATTCTTCTACTGCAGCGCTGTGGAGACCAGCACATGCGTGGTGTTTGGGGAGCCACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 90 bp CTTGGCACACAAGAGCATAGGCCTGGATGGCTTGGCAGAGGAGCGTaGCATTGTCCCTCACACTGCACAGGTCATACACGCAGCTGTGCA +
Preference number: 5 (lower is better)
Translates to: LGTQEHRPGWLGRGA*HCPSHCTGHTRSCA
Trigger: TGCACAGCTGCGTGTATGACCTGTGCAGTGTGAGGGACAATGGCACGCTCCTCTGCCAAGCCATCCAGGCCTATGCTCTTGTGTGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 90 bp CTGGTCGGCCACCAGGATCCGAAGTCCCCGCAGCCAAGCAGGTCCTaGATCGGGCTTCTTCTTGTTGATGTCGATTTCCAAGTACTCTGG +
Preference number: 5 (lower is better)
Translates to: LVGHQDPKSPQPSRS*IGLLLVDVDFQVLW
Trigger: CCAGAGTACTTGGAAATCGACATCAACAAGAAGAAGCCCGATGCAGGACCTGCTTGGCTGCGGGGACTTCGGATCCTGGTGGCCGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 90 bp TTTCTCCTTCTGGTGGTAAAGAACCTCCCGTGTCTCCCAGCTGCCTaGCCCAGGGTAGAAGAGTGTCTACCTCTGCAGCTCTTGCCGTCC +
Preference number: 5 (lower is better)
Translates to: FLLLVVKNLPCLPAA*PRVEECLPLQLLPS
Trigger: GGACGGCAAGAGCTGCAGAGGTAGACACTCTTCTACCCTGGGGCAGGCAGCTGGGAGACACGGGAGGTTCTTTACCACCAGAAGGAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645008.1
CDS CCA 90 bp CGCATGTGCTGGTCTCCACAGCGCTGCAGTAGAAGAATTTGCCTTTaGGTTCGCACACCTCGTAGGGGCTACAGGAAGCCTCCTGGCAGT +
Preference number: 5 (lower is better)
Translates to: RMCWSPQRCSRRICL*VRTPRRGYRKPPGS
Trigger: ACTGCCAGGAGGCTTCCTGTAGCCCCTACGAGGTGTGCGAACCCAAAGGCAAATTCTTCTACTGCAGCGCTGTGGAGACCAGCACATGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 90 bp CTGCACTGTGGACACACACCCAGTCTGGGTTCGCCAGTCTCCAATTaGAATGCCAAGGGCTTGGCACACAAGAGCATAGGCCTGGATGGC +
Preference number: 5 (lower is better)
Translates to: LHCGHTPSLGSPVSN*NAKGLAHKSIGLDG
Trigger: GCCATCCAGGCCTATGCTCTTGTGTGCCAAGCCCTTGGCATTCCAATTGGAGACTGGCGAACCCAGACTGGGTGTGTGTCCACAGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 90 bp TCCAGCTTTCCAGGAACACTGCCAGGTTGTCCGTGCACTTGCCGTTaGGGAGACAGAACTCGTCACTGGCGTTGGCATTGTAGAAGCCGC +
Preference number: 5 (lower is better)
Translates to: SSFPGTLPGCPCTCR*GDRTRHWRWHCRSR
Trigger: GCGGCTTCTACAATGCCAACGCCAGTGACGAGTTCTGTCTCCCCAACGGCAAGTGCACGGACAACCTGGCAGTGTTCCTGGAAAGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 90 bp ATCTGGCAGTCCAGGTCCACCCAGAAGGTCTCATTGGTGGCAAGTTaGTGCCCCTCAAAGTTGCAGCCACACTCACTCCGCGTGACACAC +
Preference number: 5 (lower is better)
Translates to: IWQSRSTQKVSLVAS*CPSKLQPHSLRVTH
Trigger: GTGTGTCACGCGGAGTGAGTGTGGCTGCAACTTTGAGGGGCACCAACTTGCCACCAATGAGACCTTCTGGGTGGACCTGGACTGCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS CCA 90 bp AGCAGAAGATCTGGCAGTCCAGGTCCACCCAGAAGGTCTCATTGGTaGCAAGTTGGTGCCCCTCAAAGTTGCAGCCACACTCACTCCGCG +
Preference number: 5 (lower is better)
Translates to: SRRSGSPGPPRRSHW*QVGAPQSCSHTHSA
Trigger: CGCGGAGTGAGTGTGGCTGCAACTTTGAGGGGCACCAACTTGCCACCAATGAGACCTTCTGGGTGGACCTGGACTGCCAGATCTTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS CCA 90 bp CTTCTTGTGGCTGTAGCAGCCGTCCAGGTAGCAGGACTCGTAGAATaGGAGGGGATCGAGAAGCCCATAGCAGGGCTGGAAGAAGCCCTT +
Preference number: 5 (lower is better)
Translates to: LLVAVAAVQVAGLVE*EGIEKPIAGLEEAL
Trigger: AAGGGCTTCTTCCAGCCCTGCTATGGGCTTCTCGATCCCCTCCCATTCTACGAGTCCTGCTACCTGGACGGCTGCTACAGCCACAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS-3UTR CAA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGATCGCACTGGGTGCAGTaGTCGACGCAGCCGGAGTCG +
Preference number: 5 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGSHWVQ*STQPES
Trigger: CGACTCCGGCTGCGTCGACAACTGCACCCAGTGCGA...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCCAGAGGAGCGTGCCATaGTCCCTCACACTGCACAGG +
Preference number: 5 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCQRSVP*SLTLHR
Trigger: CCTGTGCAGTGTGAGGGACAATGGCACGCTCCTCTG...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATTCGCCAGTCTCCAATaGGAATGCCAAGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASFASLQ*ECQGLG
Trigger: GCCAAGCCCTTGGCATTCCAATTGGAGACTGGCGAA...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGCTGTTGGAGGGGTCGTaGATGATGCCGCACCTGGAG +
Preference number: 5 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWLLEGS*MMPHLE
Trigger: CTCCAGGTGCGGCATCATCAACGACCCCTCCAACAG...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTGAGAACTGCAGCTCGTaGCAGCTGGGGGCAAGAGGT +
Preference number: 5 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGENCSS*QLGARG
Trigger: ACCTCTTGCCCCCAGCTGCAACGAGCTGCAGTTCTC...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392793.6
CDS TCA 90 bp GAAGTCCCCGCAGCCAAGCAGGTCCTGCATCGGGCTTCTTCTTGTTaGTGTCGATTTCCAAGTACTCTGGGCGCTCAGGGCAGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: EVPAAKQVLHRASSC*CRFPSTLGAQGRSS
Trigger: TGAAGACCTGCCCTGAGCGCCCAGAGTACTTGGAAATCGACATCAACAAGAAGAAGCCCGATGCAGGACCTGCTTGGCTGCGGGGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS TCA 90 bp TGGGGAAAGAGTCTGAGCTTGGCCTGCTTCCTGTGGTGCACAGGATaGGTGGGCAGCTGGTCTGGAAGTCAAAGGGGAAGCCATCAAAGG +
Preference number: 5 (lower is better)
Translates to: WGKSLSLACFLWCTG*VGSWSGSQRGSHQR
Trigger: CCTTTGATGGCTTCCCCTTTGACTTCCAGACCAGCTGCCCACTCATCCTGTGCACCACAGGAAGCAGGCCAAGCTCAGACTCTTTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS GCA 90 bp ACACCACGCATGTGCTGGTCTCCACAGCGCTGCAGTAGAAGAATTTaGCTTTGGGTTCGCACACCTCGTAGGGGCTACAGGAAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: TPRMCWSPQRCSRRI*LWVRTPRRGYRKPP
Trigger: AGGAGGCTTCCTGTAGCCCCTACGAGGTGTGCGAACCCAAAGGCAAATTCTTCTACTGCAGCGCTGTGGAGACCAGCACATGCGTGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 90 bp ACACACGCCAGCTCTCTCCCAGATCCAGGACAGACATGGCCGGCCTaGCATCCGGGCGGAGGAAGTCATCCAGTGGGTTTTTATTATAGT +
Preference number: 5 (lower is better)
Translates to: THASSLPDPGQTWPA*HPGGGSHPVGFYYS
Trigger: ACTATAATAAAAACCCACTGGATGACTTCCTCCGCCCGGATGGCAGGCCGGCCATGTCTGTCCTGGATCTGGGAGAGAGCTGGCGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 90 bp CCTCGAAAGTTGTCCAGCTTTCCAGGAACACTGCCAGGTTGTCCGTaGACTTGCCGTTGGGGAGACAGAACTCGTCACTGGCGTTGGCAT +
Preference number: 5 (lower is better)
Translates to: PRKLSSFPGTLPGCP*TCRWGDRTRHWRWH
Trigger: ATGCCAACGCCAGTGACGAGTTCTGTCTCCCCAACGGCAAGTGCACGGACAACCTGGCAGTGTTCCTGGAAAGCTGGACAACTTTCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 90 bp GGCAGTAGTACAGGCCACCTTCCTCCATGCAGTACTCATCATCCTTaGAGGGAATGGTCTCGCAGTGGACCCTGTTGTCTGTGCCACTGC +
Preference number: 5 (lower is better)
Translates to: GSSTGHLPPCSTHHP*REWSRSGPCCLCHC
Trigger: GCAGTGGCACAGACAACAGGGTCCACTGCGAGACCATTCCCTGCAAGGATGATGAGTACTGCATGGAGGAAGGTGGCCTGTACTACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS GCA 90 bp TCGATGCAAGCAGACCCATGGGCATCTCCAGGTCATCATCAGGGTTaGCGTTGTAGCGGCCACACAGACCATAGGTGCTGTTCTGCATGC +
Preference number: 5 (lower is better)
Translates to: SMQADPWASPGHHQG*RCSGHTDHRCCSAC
Trigger: GCATGCAGAACAGCACCTATGGTCTGTGTGGCCGCTACAACGGCAACCCTGATGATGACCTGGAGATGCCCATGGGTCTGCTTGCATCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000478058.1
ENST00000642222.1
ENST00000645008.1
CDS GCA 90 bp GGTGTCCCTCTTCACCCAGCTCTGCCCAAACTCATTGACACTCGATaGAAGCAGACCCATGGGCATCTCCAGGTCATCATCAGGGTTGCC +
Preference number: 5 (lower is better)
Translates to: GVPLHPALPKLIDTR*KQTHGHLQVIIRVA
Trigger: GGCAACCCTGATGATGACCTGGAGATGCCCATGGGTCTGCTTGCATCGAGTGTCAATGAGTTTGGGCAGAGCTGGGTGAAGAGGGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000478058.1
ENST00000642222.1
ENST00000645008.1
CDS GCA 90 bp GGTCGCACTGAATCACGTTGCGACGGAAACAGCGGCAGCGCCGCGTaGAGTCGCTGTTCCAAAATAGCTGCTTGGGCTCGTAATATTTGC +
Preference number: 5 (lower is better)
Translates to: GRTESRCDGNSGSAA*SRCSKIAAWARNIC
Trigger: GCAAATATTACGAGCCCAAGCAGCTATTTTGGAACAGCGACTGCACGCGGCGCTGCCGCTGTTTCCGTCGCAACGTGATTCAGTGCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS GCA 90 bp GTTACACAGCTGCAGAGAGGCCCATCCACCCGGCTCGTGCAAATCTaGTCACACCCTCCATTGTCCTCACACCAGTCCAGCCTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: VTQLQRGPSTRLVQI*SHPPLSSHQSSLFL
Trigger: GAGAAAAAGGCTGGACTGGTGTGAGGACAATGGAGGGTGTGAGCAGATTTGCACGAGCCGGGTGGATGGGCCTCTCTGCAGCTGTGTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS GCA 90 bp AGTTCCATTGAAGAATTAGAGGCTCTGCAGCTCTTGCCGTCCTCCTaGAGGGTTCCTGTTACACAGCTGCAGAGAGGCCCATCCACCCGG +
Preference number: 5 (lower is better)
Translates to: SSIEELEALQLLPSS*RVPVTQLQRGPSTR
Trigger: CCGGGTGGATGGGCCTCTCTGCAGCTGTGTAACAGGAACCCTGCAGGAGGACGGCAAGAGCTGCAGAGCCTCTAATTCTTCAATGGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000646278.1
CDS CCA 90 bp CAATTGGAATGCCAAGGGCTTGGCACACAAGAGCATAGGCCTGGATaGCTTGGCAGAGGAGCGTGCCATTGTCCCTCACACTGCACAGGT +
Preference number: 5 (lower is better)
Translates to: QLECQGLGTQEHRPG*LGRGACHCPSHCTG
Trigger: ACCTGTGCAGTGTGAGGGACAATGGCACGCTCCTCTGCCAAGCCATCCAGGCCTATGCTCTTGTGTGCCAAGCCCTTGGCATTCCAATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGCAGCGGCCTGGAACATaGACGTTTGTGGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWQRPGT*TFVVSW
Trigger: CCAGGAGACCACAAACGTCAATGTTCCAGGCCGCTG...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTCCGATGCCTCCTATCTaGACCTCCTGGTCGGCCACC +
Preference number: 5 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSPMPPI*TSWSAT
Trigger: GGTGGCCGACCAGGAGGTCAAGATAGGAGGCATCGG...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTACAGTCACCACGCCCTaGGACTCCACTGTCGTACTG +
Preference number: 5 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGTVTTP*DSTVVL
Trigger: CAGTACGACAGTGGAGTCCAAGGGCGTGGTGACTGT...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGGAACACTGCCAGGTaGTCCGTGCACTTGCCGTTG +
Preference number: 5 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWRNTAR*SVHLPL
Trigger: CAACGGCAAGTGCACGGACAACCTGGCAGTGTTCCT...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCCATTCTTGCAGGCGCTaGCATACCGGGCCACAGAGT +
Preference number: 5 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCHSCRR*HTGPQS
Trigger: ACTCTGTGGCCCGGTATGCAAGCGCCTGCAAGAATG...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTGGCGTCGGTGCGGGCTaGGCAGTAGTACAGGCCACC +
Preference number: 5 (lower is better)
Translates to: RESNLPVITSKSFQQALSGVGAG*AVVQAT
Trigger: GGTGGCCTGTACTACTGCCAAGCCCGCACCGACGCC...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATTGTGTGCCATTCACCTaGACCGTGTTCCGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHCVPFT*TVFRSL
Trigger: CAACGACCGGAACACGGTCAAGGTGAATGGCACACA...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCGTGCACTGTCTGTCATaGATCCTCACGCCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCVHCLS*ILTPSL
Trigger: GAGGGAGGGCGTGAGGATCAATGACAGACAGTGCAC...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGAGGCTCTGCAGCTCTaGCCGTCCTCCTGCAGGGTT +
Preference number: 5 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSEALQL*PSSCRV
Trigger: AACCCTGCAGGAGGACGGCAAGAGCTGCAGAGCCTC...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTGCTGCCATGGCAAGGTaGAAGGACACAGTGGGTGGA +
Preference number: 5 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGAAMAR*KDTVGG
Trigger: TCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGC...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCGCTGCCATGGCAAGGTaGAAGGACACAGTGGGTGGA +
Preference number: 5 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCAAMAR*KDTVGG
Trigger: TCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGC...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS TCA 90 bp CCTGGCAGAAGGTGTCCCTCTTCACCCAGCTCTGCCCAAACTCATTaGCACTCGATGCAAGCAGACCCATGGGCATCTCCAGGTCATCAT +
Preference number: 5 (lower is better)
Translates to: PGRRCPSSPSSAQTH*HSMQADPWASPGHH
Trigger: ATGATGACCTGGAGATGCCCATGGGTCTGCTTGCATCGAGTGTCAATGAGTTTGGGCAGAGCTGGGTGAAGAGGGACACCTTCTGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000478058.1
ENST00000642222.1
ENST00000645008.1
CDS TCA 90 bp CCGGCTTCCCTCGCAAGGTCACATAATCATCTGTTAGGTCCCCGTTaGAGTTGCCACAGAGACCGCACACTTTGTTCTGCAGCCTCTCGC +
Preference number: 5 (lower is better)
Translates to: PASLARSHNHLLGPR*SCHRDRTLCSAASR
Trigger: GCGAGAGGCTGCAGAACAAAGTGTGCGGTCTCTGTGGCAACTTCAACGGGGACCTAACAGATGATTATGTGACCTTGCGAGGGAAGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS TCA 90 bp GATCGAGAAGCCCATAGCAGGGCTGGAAGAAGCCCTTCATGTCGGTaGGCTTCAGGCAGTAGCCATCACCCTGCATCTTCTGGATGTGCA +
Preference number: 5 (lower is better)
Translates to: DREAHSRAGRSPSCR*ASGSSHHPASSGCA
Trigger: TGCACATCCAGAAGATGCAGGGTGATGGCTACTGCCTGAAGCTCACCGACATGAAGGGCTTCTTCCAGCCCTGCTATGGGCTTCTCGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS GCA 90 bp CATCATCCTTGCAGGGAATGGTCTCGCAGTGGACCCTGTTGTCTGTaGCACTGCAATAGCAGAAGATCTGGCAGTCCAGGTCCACCCAGA +
Preference number: 5 (lower is better)
Translates to: HHPCREWSRSGPCCL*HCNSRRSGSPGPPR
Trigger: TCTGGGTGGACCTGGACTGCCAGATCTTCTGCTATTGCAGTGGCACAGACAACAGGGTCCACTGCGAGACCATTCCCTGCAAGGATGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS CCA 90 bp ATGGTGAGGTTGGGGGCCGACCACTTGTCGAAGTTGATGATAAGCTaGAAGGAGATGTCGGGCAGTTTCTGGCAGATGGTGGACAGCACG +
Preference number: 5 (lower is better)
Translates to: MVRLGADHLSKLMIS*KEMSGSFWQMVDST
Trigger: CGTGCTGTCCACCATCTGCCAGAAACTGCCCGACATCTCCTTCCAGCTTATCATCAACTTCGACAAGTGGTCGGCCCCCAACCTCACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS-3UTR CAA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTGAAGGAATTGTCCCCTaGAGGTGCAGCCATTGGCTG +
Preference number: 5 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGEGIVP*RCSHWL
Trigger: CAGCCAATGGCTGCACCTCAAGGGGACAATTCCTTC...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGGAAGGAATTGTCCCCTaGAGGTGCAGCCATTGGCTG +
Preference number: 5 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWEGIVP*RCSHWL
Trigger: CAGCCAATGGCTGCACCTCAAGGGGACAATTCCTTC...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGTTCGCCAGTCTCCAATaGGAATGCCAAGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWFASLQ*ECQGLG
Trigger: GCCAAGCCCTTGGCATTCCAATTGGAGACTGGCGAA...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGACTGTTGGAGGGGTCGTaGATGATGCCGCACCTGGAG +
Preference number: 5 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGLLEGS*MMPHLE
Trigger: CTCCAGGTGCGGCATCATCAACGACCCCTCCAACAG...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCTCCCGGTCCTCATTCTaGGCTGTGACAACAAACTTG +
Preference number: 5 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSSRSSF*AVTTNL
Trigger: CAAGTTTGTTGTCACAGCCAAGAATGAGGACCGGGA...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGAGAAACCTTCCACCTaGGCACAGGACGGACAGCGG +
Preference number: 5 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGEKPST*AQDGQR
Trigger: CCGCTGTCCGTCCTGTGCCAAGGTGGAAGGTTTCTC...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATACCGTGTTCCGGTCGTaGATGAGAATCTGCTCTTCG +
Preference number: 5 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHTVFRS*MRICSS
Trigger: CGAAGAGCAGATTCTCATCAACGACCGGAACACGGT...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGTGTGTGCCATTCACCTaGACCGTGTTCCGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWCVPFT*TVFRSL
Trigger: CAACGACCGGAACACGGTCAAGGTGAATGGCACACA...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGTCTGTTAGGTCCCCGTaGAAGTTGCCACAGAGACCG +
Preference number: 5 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWSVRSP*KLPQRP
Trigger: CGGTCTCTGTGGCAACTTCAACGGGGACCTAACAGA...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGCTCTTCTGCATGCCATaGGTTTTCCAGCTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWLFCMP*VFQLWA
Trigger: GGCCCAGAGCTGGAAAACCAATGGCATGCAGAAGAG...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCAGCTCGCAAGTTCGGTaGGGACAGTCCGCCCCCACA +
Preference number: 5 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLSSQVR*GQSAPT
Trigger: TGTGGGGGCGGACTGTCCCAACCGAACTTGCGAGCT...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCCCGAGCTGGAAGAGCTaGCACTTAGATATGGACACT +
Preference number: 5 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSPSWKS*HLDMDT
Trigger: AGTGTCCATATCTAAGTGCAAGCTCTTCCAGCTCGG...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS GCA 90 bp AAGTTGTCCAGCTTTCCAGGAACACTGCCAGGTTGTCCGTGCACTTaGCGTTGGGGAGACAGAACTCGTCACTGGCGTTGGCATTGTAGA +
Preference number: 5 (lower is better)
Translates to: KLSSFPGTLPGCPCT*RWGDRTRHWRWHCR
Trigger: TCTACAATGCCAACGCCAGTGACGAGTTCTGTCTCCCCAACGGCAAGTGCACGGACAACCTGGCAGTGTTCCTGGAAAGCTGGACAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 90 bp TCCATTGCAGATCTCCTCGAAAGTTGTCCAGCTTTCCAGGAACACTaGCAGGTTGTCCGTGCACTTGCCGTTGGGGAGACAGAACTCGTC +
Preference number: 5 (lower is better)
Translates to: SIADLLESCPAFQEH*QVVRALAVGETELV
Trigger: GACGAGTTCTGTCTCCCCAACGGCAAGTGCACGGACAACCTGGCAGTGTTCCTGGAAAGCTGGACAACTTTCGAGGAGATCTGCAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 90 bp CCGAGTCATTGTTGCAGGCCTTCAGCAGGTCCCCACACTCTCCATTaGAGATCTCCTCGAAAGTTGTCCAGCTTTCCAGGAACACTGCCA +
Preference number: 5 (lower is better)
Translates to: PSHCCRPSAGPHTLH*RSPRKLSSFPGTLP
Trigger: TGGCAGTGTTCCTGGAAAGCTGGACAACTTTCGAGGAGATCTGCAATGGAGAGTGTGGGGACCTGCTGAAGGCCTGCAACAATGACTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 90 bp ACTTTAAATGCCCAGCGGCCTGGAACATTGACGTTTGTGGTCTCCTaGATATTCACGATCTCGGGGGTTCTTGACCCCGGGAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: TLNAQRPGTLTFVVS*IFTISGVLDPGRLK
Trigger: CTTCAGCCTCCCGGGGTCAAGAACCCCCGAGATCGTGAATATCCAGGAGACCACAAACGTCAATGTTCCAGGCCGCTGGGCATTTAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 90 bp TCCTGCATCGGGCTTCTTCTTGTTGATGTCGATTTCCAAGTACTCTaGGCGCTCAGGGCAGGTCTTCAGGAGGGTGTAGGAGAACTCGGA +
Preference number: 5 (lower is better)
Translates to: SCIGLLLVDVDFQVL*ALRAGLQEGVGELG
Trigger: TCCGAGTTCTCCTACACCCTCCTGAAGACCTGCCCTGAGCGCCCAGAGTACTTGGAAATCGACATCAACAAGAAGAAGCCCGATGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 90 bp AATAGCAGAAGATCTGGCAGTCCAGGTCCACCCAGAAGGTCTCATTaGTGGCAAGTTGGTGCCCCTCAAAGTTGCAGCCACACTCACTCC +
Preference number: 5 (lower is better)
Translates to: NSRRSGSPGPPRRSH*WQVGAPQSCSHTHS
Trigger: GGAGTGAGTGTGGCTGCAACTTTGAGGGGCACCAACTTGCCACCAATGAGACCTTCTGGGTGGACCTGGACTGCCAGATCTTCTGCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS CCA 90 bp ACAGGCCACCTTCCTCCATGCAGTACTCATCATCCTTGCAGGGAATaGTCTCGCAGTGGACCCTGTTGTCTGTGCCACTGCAATAGCAGA +
Preference number: 5 (lower is better)
Translates to: TGHLPPCSTHHPCRE*SRSGPCCLCHCNSR
Trigger: TCTGCTATTGCAGTGGCACAGACAACAGGGTCCACTGCGAGACCATTCCCTGCAAGGATGATGAGTACTGCATGGAGGAAGGTGGCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAGGGAGGCTGAAGAAATaGGTGAGGTTTCCACCATTA +
Preference number: 5 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASGRLKK*VRFPPL
Trigger: TAATGGTGGAAACCTCACCAATTTCTTCAGCCTCCC...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGAGGACGAAGCCCTGGTaGCACTCGCAGCCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQRTKPW*HSQPSV
Trigger: CACAGAGGGCTGCGAGTGCAACCAGGGCTTCGTCCT...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAAGCCCCCTGTGCAATaGAAGTATGTGGTGGACAGC +
Preference number: 5 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWKPPVQ*KYVVDS
Trigger: GCTGTCCACCACATACTTCAATTGCACAGGGGGCTT...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGAGCAGCTCCGAGTCATaGTTGCAGGCCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLSSSES*LQAFSR
Trigger: CCTGCTGAAGGCCTGCAACAATGACTCGGAGCTGCT...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTACCCAGAAGGTCTCATaGGTGGCAAGTTGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSTQKVS*VASWCP
Trigger: GGGGCACCAACTTGCCACCAATGAGACCTTCTGGGT...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAGCTGTGACAACAAACTaGGGGAAAGAGTCTGAGCTT +
Preference number: 5 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASAVTTN*GKESEL
Trigger: AAGCTCAGACTCTTTCCCCAAGTTTGTTGTCACAGC...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTCACAGCTGCTGCACTTaGGAGAAACCTTCCACCTTG +
Preference number: 5 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGHSCCT*EKPSTL
Trigger: CAAGGTGGAAGGTTTCTCCAAAGTGCAGCAGCTGTG...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTTTGGGGGCCGACCACTaGTCGAAGTTGATGATAAGC +
Preference number: 5 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGLGADH*SKLMIS
Trigger: GCTTATCATCAACTTCGACAAGTGGTCGGCCCCCAA...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGTTGGGGGCCGACCACTaGTCGAAGTTGATGATAAGC +
Preference number: 5 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWLGADH*SKLMIS
Trigger: GCTTATCATCAACTTCGACAAGTGGTCGGCCCCCAA...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGACCGTGTTCCGGTCGTaGATGAGAATCTGCTCTTCG +
Preference number: 5 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWTVFRS*MRICSS
Trigger: CGAAGAGCAGATTCTCATCAACGACCGGAACACGGT...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTAGCTCGCAAGTTCGGTaGGGACAGTCCGCCCCCACA +
Preference number: 5 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPSSQVR*GQSAPT
Trigger: TGTGGGGGCGGACTGTCCCAACCGAACTTGCGAGCT...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATTATCGGAGCTTATCATaGCTATCTCGGGTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHYRSLS*LSRVGV
Trigger: CACACCCACCCGAGATAGCAATGATAAGCTCCGATA...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCAGGTGGCATCATTTaGAGATGCTGGACACTTTCA +
Preference number: 5 (lower is better)
Translates to: PSGQSCHGKVEGHSGWRSAGGII*RCWTLS
Trigger: TGAAAGTGTCCAGCATCTCAAAATGATGCCACCTGC...GCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS TCA 90 bp GGCCACACAGACCATAGGTGCTGTTCTGCATGCTCCGAGGGACTGTaGTGGACAGGAAGGTCTTCCAGTCATATACAACCTTCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: GHTDHRCCSACSEGL*WTGRSSSHIQPSGQ
Trigger: TTGGCCTGAAGGTTGTATATGACTGGAAGACCTTCCTGTCCATCACAGTCCCTCGGAGCATGCAGAACAGCACCTATGGTCTGTGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000478058.1
ENST00000642222.1
ENST00000645008.1
CDS TCA 90 bp CTGCATCTTCTGGATGTGCACATTGTCACACATGGCTGCATACTGTaGGAACTGCAGCTCGTTGCAGCTGGGGGCAAGAGGTCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: LHLLDVHIVTHGCIL*ELQLVAAGGKRSLL
Trigger: CAGAAGAGACCTCTTGCCCCCAGCTGCAACGAGCTGCAGTTCTCACAGTATGCAGCCATGTGTGACAATGTGCACATCCAGAAGATGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264037.2
ENST00000392793.6
CDS GCA 90 bp TTCTGGATGTGCACATTGTCACACATGGCTGCATACTGTGAGAACTaGAGCTCGTTGCAGCTGGGGGCAAGAGGTCTCTTCTGCATGCCA +
Preference number: 5 (lower is better)
Translates to: FWMCTLSHMAAYCEN*SSLQLGARGLFCMP
Trigger: TGGCATGCAGAAGAGACCTCTTGCCCCCAGCTGCAACGAGCTGCAGTTCTCACAGTATGCAGCCATGTGTGACAATGTGCACATCCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264037.2
ENST00000392793.6
CDS CCA 90 bp AGTAGCCATCACCCTGCATCTTCTGGATGTGCACATTGTCACACATaGCTGCATACTGTGAGAACTGCAGCTCGTTGCAGCTGGGGGCAA +
Preference number: 5 (lower is better)
Translates to: SSHHPASSGCAHCHT*LHTVRTAARCSWGQ
Trigger: TTGCCCCCAGCTGCAACGAGCTGCAGTTCTCACAGTATGCAGCCATGTGTGACAATGTGCACATCCAGAAGATGCAGGGTGATGGCTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264037.2
ENST00000392793.6
CDS-3UTR CAA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCCTCCCTGGGCTGAGCTaGGTGCTGTACAAGTGCGAA +
Preference number: 5 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLLPGLS*VLYKCE
Trigger: TTCGCACTTGTACAGCACCAAGCTCAGCCCAGGGAG...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTCTTGAGGTGCAGCCATaGGCTGGGTCAATTTCCTTT +
Preference number: 5 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGLEVQP*AGSISF
Trigger: AAAGGAAATTGACCCAGCCAATGGCTGCACCTCAAG...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGCAGAGCTCTGACTCATaGCCCCCACTCTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQQSSDS*PPLWHR
Trigger: CCTGTGCCAGAGTGGGGGCAATGAGTCAGAGCTCTG...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTCAGAGCTCTGACTCATaGCCCCCACTCTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPQSSDS*PPLWHR
Trigger: CCTGTGCCAGAGTGGGGGCAATGAGTCAGAGCTCTG...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTTCCACGTCCGCATTCTaGCAGGCGCTTGCATACCGG +
Preference number: 5 (lower is better)
Translates to: RESNLPVITSKSFQQALSSTSAF*QALAYR
Trigger: CCGGTATGCAAGCGCCTGCAAGAATGCGGACGTGGA...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCTCCCGGTCCTCATTCTaGGCTGTGACAACAAACTTG +
Preference number: 5 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCSRSSF*AVTTNL
Trigger: CAAGTTTGTTGTCACAGCCAAGAATGAGGACCGGGA...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTTCTGTTAGGTCCCCGTaGAAGTTGCCACAGAGACCG +
Preference number: 5 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSSVRSP*KLPQRP
Trigger: CGGTCTCTGTGGCAACTTCAACGGGGACCTAACAGA...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGACTCTTCTGCATGCCATaGGTTTTCCAGCTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGLFCMP*VFQLWA
Trigger: GGCCCAGAGCTGGAAAACCAATGGCATGCAGAAGAG...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATTTCTGGATGTGCACATaGTCACACATGGCTGCATAC +
Preference number: 5 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHFWMCT*SHMAAY
Trigger: GTATGCAGCCATGTGTGACAATGTGCACATCCAGAA...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTCACAGCTCCCTGCCATaGCCCAGCTCGCAAGTTCGG +
Preference number: 5 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPHSSLP*PSSQVR
Trigger: CCGAACTTGCGAGCTGGGCAATGGCAGGGAGCTGTG...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCAATGATATGCGTGCCATaGGACTGCACAATGTTTCCA +
Preference number: 5 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASMICVP*DCTMFP
Trigger: TGGAAACATTGTGCAGTCCAATGGCACGCATATCAT...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCATGTTGCCAGTGTTGTaGGCGCTTTCGATCCAGAGT +
Preference number: 5 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCMLPVL*ALSIQS
Trigger: ACTCTGGATCGAAAGCGCCAACAACACTGGCAACAT...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCATGATGTTGCCAGTGTaGTTGGCGCTTTCGATCCAG +
Preference number: 5 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCMMLPV*LALSIQ
Trigger: CTGGATCGAAAGCGCCAACAACACTGGCAACATCAT...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCCATGAAAATTCCACATaGATCGTGCGGTCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCHENST*IVRSLV
Trigger: CACCAGGGACCGCACGATCAATGTGGAATTTTCATG...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAGACAGAACACGTGCTATCGGAGCTTATCATaGCTATCTCGGGTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: ARLKDTVGGEAPHRQNTCYRSLS*LSRVGV
Trigger: CACACCCACCCGAGATAGCAATGATAAGCTCCGATA...GCACGTGTTCTGTCTATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCGCTGGTTTCTGGACCTaGGACCATTGGAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLAGFWT*DHWRQV
Trigger: CACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGC...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGAGAACTGCAGCTCGTaGCAGCTCTTCTGCATGCCA +
Preference number: 5 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLENCSS*QLFCMP
Trigger: TGGCATGCAGAAGAGCTGCAACGAGCTGCAGTTCTC...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642222.1
ENST00000645008.1
CDS CCA 90 bp GTAATAGATCTCGCCTCGAATTCCATTGTGCACATCTGCCCAAAATaGGGCGACGAAGGCTCTCCCATCTGTCAGGGGAAAGGATTCTGG +
Preference number: 5 (lower is better)
Translates to: VIDLASNSIVHICPK*GDEGSPICQGKGFW
Trigger: CCAGAATCCTTTCCCCTGACAGATGGGAGAGCCTTCGTCGCCCCATTTTGGGCAGATGTGCACAATGGAATTCGAGGCGAGATCTATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 90 bp GACAGACATGGCCGGCCTGCCATCCGGGCGGAGGAAGTCATCCAGTaGGTTTTTATTATAGTTTCCACAGAGTCCACAGGTGGAGTTTAT +
Preference number: 5 (lower is better)
Translates to: DRHGRPAIRAEEVIQ*VFIIVSTESTGGVY
Trigger: ATAAACTCCACCTGTGGACTCTGTGGAAACTATAATAAAAACCCACTGGATGACTTCCTCCGCCCGGATGGCAGGCCGGCCATGTCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTCAGCGGCCTGGAACATaGACGTTTGTGGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPQRPGT*TFVVSW
Trigger: CCAGGAGACCACAAACGTCAATGTTCCAGGCCGCTG...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAGGACGAAGCCCTGGTaGCACTCGCAGCCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQRTKPW*HSQPSV
Trigger: CACAGAGGGCTGCGAGTGCAACCAGGGCTTCGTCCT...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGACAGTCACCACGCCCTaGGACTCCACTGTCGTACTG +
Preference number: 5 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQTVTTP*DSTVVL
Trigger: CAGTACGACAGTGGAGTCCAAGGGCGTGGTGACTGT...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGAGGAACACTGCCAGGTaGTCCGTGCACTTGCCGTTG +
Preference number: 5 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQRNTAR*SVHLPL
Trigger: CAACGGCAAGTGCACGGACAACCTGGCAGTGTTCCT...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTAGATCTCCTCGAAAGTaGTCCAGCTTTCCAGGAACA +
Preference number: 5 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGRSPRK*SSFPGT
Trigger: TGTTCCTGGAAAGCTGGACAACTTTCGAGGAGATCT...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTGGTGCCCCTCAAAGTaGCAGCCACACTCACTCCGC +
Preference number: 5 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPWCPSK*QPHSLR
Trigger: GCGGAGTGAGTGTGGCTGCAACTTTGAGGGGCACCA...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGCTCATTGGTGGCAAGTaGGTGCCCCTCAAAGTTGCA +
Preference number: 5 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLLIGGK*VPLKVA
Trigger: TGCAACTTTGAGGGGCACCAACTTGCCACCAATGAG...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CCCGTTTCATACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGCAGTACTCATCATCCTaGCAGGGAATGGTCTCGCAG +
Preference number: 5 (lower is better)
Translates to: PVSYSERGAWMVAGFWTLQYSSS*QGMVSQ
Trigger: CTGCGAGACCATTCCCTGCAAGGATGATGAGTACTG...CAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGTATGAAACGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTGGAAAGAGTCTGAGCTaGGCCTGCTTCCTGTGGTGC +
Preference number: 5 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPGKSLS*ACFLWC
Trigger: GCACCACAGGAAGCAGGCCAAGCTCAGACTCTTTCC...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGGGAAAGAGTCTGAGCTaGGCCTGCTTCCTGTGGTGC +
Preference number: 5 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQGKSLS*ACFLWC
Trigger: GCACCACAGGAAGCAGGCCAAGCTCAGACTCTTTCC...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCGAGAAACCTTCCACCTaGGCACAGGACGGACAGCGG +
Preference number: 5 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGEKPST*AQDGQR
Trigger: CCGCTGTCCGTCCTGTGCCAAGGTGGAAGGTTTCTC...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTCACAGCTGCTGCACTTaGGAGAAACCTTCCACCTTG +
Preference number: 5 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSHSCCT*EKPSTL
Trigger: CAAGGTGGAAGGTTTCTCCAAAGTGCAGCAGCTGTG...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAACACTCCTCGTCTGACTaGCATTGGCGCGGGTCGCAC +
Preference number: 5 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQHSSSD*HWRGSH
Trigger: GTGCGACCCGCGCCAATGCAAGTCAGACGAGGAGTG...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTGAAATGATGGTGAGGTaGGGGGCCGACCACTTGTCG +
Preference number: 5 (lower is better)
Translates to: RESNLPVITSKSFQQALSEMMVR*GADHLS
Trigger: CGACAAGTGGTCGGCCCCCAACCTCACCATCATTTC...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTGTGCACTGTCTGTCATaGATCCTCACGCCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPVHCLS*ILTPSL
Trigger: GAGGGAGGGCGTGAGGATCAATGACAGACAGTGCAC...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATATGATATGCGTGCCATaGGACTGCACAATGTTTCCA +
Preference number: 5 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHMICVP*DCTMFP
Trigger: TGGAAACATTGTGCAGTCCAATGGCACGCATATCAT...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTGCTCACACCCTCCATaGTCCTCACACCAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQCSHPP*SSHQSS
Trigger: GCTGGACTGGTGTGAGGACAATGGAGGGTGTGAGCA...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGGCAGGTGGCATCATTTaGAGATGCTGGACACTTTCA +
Preference number: 5 (lower is better)
Translates to: NIPSGQSCHGKVEGHSGWAGGII*RCWTLS
Trigger: TGAAAGTGTCCAGCATCTCAAAATGATGCCACCTGC...CCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGGCTGGTTTCTGGACCTaGGACCATTGGAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQAGFWT*DHWRQV
Trigger: CACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGC...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS CCA 90 bp AGTAGCCATCACCCTGCATCTTCTGGATGTGCACATTGTCACACATaGCTGCATACTGTGAGAACTGCAGCTCGTTGCAGCTCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: SSHHPASSGCAHCHT*LHTVRTAARCSSSA
Trigger: TGCAGAAGAGCTGCAACGAGCTGCAGTTCTCACAGTATGCAGCCATGTGTGACAATGTGCACATCCAGAAGATGCAGGGTGATGGCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS-3UTR CAA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCTCCCTGGGCTGAGCTaGGTGCTGTACAAGTGCGAA +
Preference number: 5 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGLPGLS*VLYKCE
Trigger: TTCGCACTTGTACAGCACCAAGCTCAGCCCAGGGAG...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTAAGGTTGCCATGTCTTaGAAGTACTTCCTGATGTCC +
Preference number: 5 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGKVAMS*KYFLMS
Trigger: GGACATCAGGAAGTACTTCAAAGACATGGCAACCTT...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCCAGACAGCGGCACTaGACGGTGCAGTTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQSRQRH*TVQFKS
Trigger: TGACTTGAACTGCACCGTCAAGTGCCGCTGTCTGGA...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAACAGAGGAGCGTGCCATaGTCCCTCACACTGCACAGG +
Preference number: 5 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQQRSVP*SLTLHR
Trigger: CCTGTGCAGTGTGAGGGACAATGGCACGCTCCTCTG...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTAGCTCCGAGTCATTGTaGCAGGCCTTCAGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPSSESL*QAFSRS
Trigger: GGACCTGCTGAAGGCCTGCAACAATGACTCGGAGCT...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAACAGAGCTCTGACTCATaGCCCCCACTCTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQQSSDS*PPLWHR
Trigger: CCTGTGCCAGAGTGGGGGCAATGAGTCAGAGCTCTG...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCACCCAGAAGGTCTCATaGGTGGCAAGTTGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGTQKVS*VASWCP
Trigger: GGGGCACCAACTTGCCACCAATGAGACCTTCTGGGT...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAGAGAAACCTTCCACCTaGGCACAGGACGGACAGCGG +
Preference number: 5 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQEKPST*AQDGQR
Trigger: CCGCTGTCCGTCCTGTGCCAAGGTGGAAGGTTTCTC...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCACACTCCTCGTCTGACTaGCATTGGCGCGGGTCGCAC +
Preference number: 5 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPHSSSD*HWRGSH
Trigger: GTGCGACCCGCGCCAATGCAAGTCAGACGAGGAGTG...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCGAAATGATGGTGAGGTaGGGGGCCGACCACTTGTCG +
Preference number: 5 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGEMMVR*GADHLS
Trigger: CGACAAGTGGTCGGCCCCCAACCTCACCATCATTTC...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATAAATGGAACATTCACTaGTGTGCCATTCACCTTGAC +
Preference number: 5 (lower is better)
Translates to: AKAAMARLKDTVGGEAPHKWNIH*CAIHLD
Trigger: GTCAAGGTGAATGGCACACAAGTGAATGTTCCATTT...ATGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCAGAGACCGCACACTTaGTTCTGCAGCCTCTCGCTG +
Preference number: 5 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGQRPHT*FCSLSL
Trigger: CAGCGAGAGGCTGCAGAACAAAGTGTGCGGTCTCTG...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCTGTTAGGTCCCCGTaGAAGTTGCCACAGAGACCG +
Preference number: 5 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPSVRSP*KLPQRP
Trigger: CGGTCTCTGTGGCAACTTCAACGGGGACCTAACAGA...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTGTTTTCGAGGGAGAGTaGCTGACCGAGTGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPVFEGE*LTEWPS
Trigger: TGAAGGCCACTCGGTCAGCAACTCTCCCTCGAAAAC...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645008.1
CDS CCA 90 bp GGCTGGGTCAATTTCCTTTCCATCAACTTTAAATGCCCAGCGGCCTaGAACATTGACGTTTGTGGTCTCCTGGATATTCACGATCTCGGG +
Preference number: 5 (lower is better)
Translates to: GWVNFLSINFKCPAA*NIDVCGLLDIHDLG
Trigger: CCCGAGATCGTGAATATCCAGGAGACCACAAACGTCAATGTTCCAGGCCGCTGGGCATTTAAAGTTGATGGAAAGGAAATTGACCCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 90 bp CACAGAGTCCACAGGTGGAGTTTATATAGGAGCCTGGGACGGAAATaGAGGCGTAGTGCTGGCCATCAAAAGTCACTAAGAGCCCAAAAT +
Preference number: 5 (lower is better)
Translates to: HRVHRWSLYRSLGRK*RRSAGHQKSLRAQN
Trigger: ATTTTGGGCTCTTAGTGACTTTTGATGGCCAGCACTACGCCTCCATTTCCGTCCCAGGCTCCTATATAAACTCCACCTGTGGACTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 90 bp TATGTGGTGGACAGCCGGATGTACAATAGACCTATGTCTGAGTACTaGACAGTCACCACGCCCTTGGACTCCACTGTCGTACTGTTTTTG +
Preference number: 5 (lower is better)
Translates to: YVVDSRMYNRPMSEY*TVTTPLDSTVVLFL
Trigger: CAAAAACAGTACGACAGTGGAGTCCAAGGGCGTGGTGACTGTCCAGTACTCAGACATAGGTCTATTGTACATCCGGCTGTCCACCACATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGATCGCCTCGAATTCCATaGTGCACATCTGCCCAAAAT +
Preference number: 5 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGSPRIP*CTSAQN
Trigger: ATTTTGGGCAGATGTGCACAATGGAATTCGAGGCGA...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGAGGCTGAAGAAATaGGTGAGGTTTCCACCATTA +
Preference number: 5 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSGRLKK*VRFPPL
Trigger: TAATGGTGGAAACCTCACCAATTTCTTCAGCCTCCC...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTCCAGACAGCGGCACTaGACGGTGCAGTTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPSRQRH*TVQFKS
Trigger: TGACTTGAACTGCACCGTCAAGTGCCGCTGTCTGGA...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACTCCACGTCCGCATTCTaGCAGGCGCTTGCATACCGG +
Preference number: 5 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNSTSAF*QALAYR
Trigger: CCGGTATGCAAGCGCCTGCAAGAATGCGGACGTGGA...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACTGGTGCCCCTCAAAGTaGCAGCCACACTCACTCCGC +
Preference number: 5 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNWCPSK*QPHSLR
Trigger: GCGGAGTGAGTGTGGCTGCAACTTTGAGGGGCACCA...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTCTCATTGGTGGCAAGTaGGTGCCCCTCAAAGTTGCA +
Preference number: 5 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPLIGGK*VPLKVA
Trigger: TGCAACTTTGAGGGGCACCAACTTGCCACCAATGAG...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTTTGGGGGCCGACCACTaGTCGAAGTTGATGATAAGC +
Preference number: 5 (lower is better)
Translates to: RESNLPVITSKSFQQALSLGADH*SKLMIS
Trigger: GCTTATCATCAACTTCGACAAGTGGTCGGCCCCCAA...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCTGTGTGCCATTCACCTaGACCGTGTTCCGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGCVPFT*TVFRSL
Trigger: CAACGACCGGAACACGGTCAAGGTGAATGGCACACA...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGGCAGGTAAATGGAACATTCACTaGTGTGCCATTCACCTTGAC +
Preference number: 5 (lower is better)
Translates to: KRSLDGRWFLDLGPLEAGKWNIH*CAIHLD
Trigger: GTCAAGGTGAATGGCACACAAGTGAATGTTCCATTT...ACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTGGGTGGAGAAGCGCCTCATCTAGTGACAACTGTTaGGGAATTTTACACAAGAGA +
Preference number: 5 (lower is better)
Translates to: GQSCHGKVEGHSGWRSASSSDNC*GILHKR
Trigger: TCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGA...TGAGGCGCTTCTCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAGCTGCCATGGCAAGGTaGAAGGACACAGTGGGTGGA +
Preference number: 5 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQAAMAR*KDTVGG
Trigger: TCCACCCACTGTGTCCTTCAACCTTGCCATGGCAGC...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS TCA 90 bp ATTGACGTTTGTGGTCTCCTGGATATTCACGATCTCGGGGGTTCTTaGCCCCGGGAGGCTGAAGAAATTGGTGAGGTTTCCACCATTAAA +
Preference number: 5 (lower is better)
Translates to: IDVCGLLDIHDLGGS*PREAEEIGEVSTIK
Trigger: TTTAATGGTGGAAACCTCACCAATTTCTTCAGCCTCCCGGGGTCAAGAACCCCCGAGATCGTGAATATCCAGGAGACCACAAACGTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 90 bp GGTGCAGCCATTGGCTGGGTCAATTTCCTTTCCATCAACTTTAAATaGCCAGCGGCCTGGAACATTGACGTTTGTGGTCTCCTGGATATT +
Preference number: 5 (lower is better)
Translates to: GAAIGWVNFLSINFK*PAAWNIDVCGLLDI
Trigger: AATATCCAGGAGACCACAAACGTCAATGTTCCAGGCCGCTGGGCATTTAAAGTTGATGGAAAGGAAATTGACCCAGCCAATGGCTGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 90 bp ACGAAGGCTCTCCCATCTGTCAGGGGAAAGGATTCTGGCGTGAACTaGCTCACTAGCACATTGAAGGAAACAACTCCGTTGTTATTGACA +
Preference number: 5 (lower is better)
Translates to: TKALPSVRGKDSGVN*LTSTLKETTPLLLT
Trigger: TGTCAATAACAACGGAGTTGTTTCCTTCAATGTGCTAGTGAGCCAGTTCACGCCAGAATCCTTTCCCCTGACAGATGGGAGAGCCTTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTTACTTCCTGATGTCCTaGGTGGCTCTTTTCAAGATG +
Preference number: 5 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSYFLMS*VALFKM
Trigger: CATCTTGAAAAGAGCCACCAAGGACATCAGGAAGTA...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAAAGGTTGCCATGTCTTaGAAGTACTTCCTGATGTCC +
Preference number: 5 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGKVAMS*KYFLMS
Trigger: GGACATCAGGAAGTACTTCAAAGACATGGCAACCTT...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGCTTGAGGTGCAGCCATaGGCTGGGTCAATTTCCTTT +
Preference number: 5 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQLEVQP*AGSISF
Trigger: AAAGGAAATTGACCCAGCCAATGGCTGCACCTCAAG...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp GAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCGCATCGGGCTTCTTCTaGTTGATGTCGATTTCCAAG +
Preference number: 5 (lower is better)
Translates to: EGVKPSSHHFKIVPTGPLASGFF*LMSISK
Trigger: CTTGGAAATCGACATCAACAAGAAGAAGCCCGATGC...GAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTTCCCCACACTCTCCATaGCAGATCTCCTCGAAAGTT +
Preference number: 5 (lower is better)
Translates to: RESNLPVITSKSFQQALSSPHSP*QISSKV
Trigger: AACTTTCGAGGAGATCTGCAATGGAGAGTGTGGGGA...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCCGGTCCTCATTCTaGGCTGTGACAACAAACTTG +
Preference number: 5 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPSRSSF*AVTTNL
Trigger: CAAGTTTGTTGTCACAGCCAAGAATGAGGACCGGGA...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCACAGAGACCGCACACTTaGTTCTGCAGCCTCTCGCTG +
Preference number: 5 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPQRPHT*FCSLSL
Trigger: CAGCGAGAGGCTGCAGAACAAAGTGTGCGGTCTCTG...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTCCGAGCTGGAAGAGCTaGCACTTAGATATGGACACT +
Preference number: 5 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPPSWKS*HLDMDT
Trigger: AGTGTCCATATCTAAGTGCAAGCTCTTCCAGCTCGG...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTCCGAGCTGGAAGAGCTaGCACTTAGATATGGACACT +
Preference number: 5 (lower is better)
Translates to: RESNLPVITSKSFQQALSPSWKS*HLDMDT
Trigger: AGTGTCCATATCTAAGTGCAAGCTCTTCCAGCTCGG...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACGTGCACTGTCTGTCATaGATCCTCACGCCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNVHCLS*ILTPSL
Trigger: GAGGGAGGGCGTGAGGATCAATGACAGACAGTGCAC...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTATGTTGCCAGTGTTGTaGGCGCTTTCGATCCAGAGT +
Preference number: 5 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPMLPVL*ALSIQS
Trigger: ACTCTGGATCGAAAGCGCCAACAACACTGGCAACAT...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTCATGAAAATTCCACATaGATCGTGCGGTCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: RESNLPVITSKSFQQALSHENST*IVRSLV
Trigger: CACCAGGGACCGCACGATCAATGTGGAATTTTCATG...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp ACTCTGAAAGAGGAGCTTGGATGGTCGCTGGTTTCTGGACCTTGGACCATTGGAGTGGCAATCCTGGAATaGTGTGGGCAAGTGATTTTA +
Preference number: 5 (lower is better)
Translates to: TLKEELGWSLVSGPWTIGVAILE*CGQVIL
Trigger: TAAAATCACTTGCCCACACAATTCCAGGATTGCCAC...TCCAATGGTCCAAGGTCCAGAAACCAGCGACCATCCAAGCTCCTCTTTCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACTGCTCACACCCTCCATaGTCCTCACACCAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNCSHPP*SSHQSS
Trigger: GCTGGACTGGTGTGAGGACAATGGAGGGTGTGAGCA...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACGCTGGTTTCTGGACCTaGGACCATTGGAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNAGFWT*DHWRQV
Trigger: CACCTGCCTCCAATGGTCCAAGGTCCAGAAACCAGC...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS CCA 90 bp AAACCGAGCTGGAAGAGCTTGCACTTAGATATGGACACTTCCATTTaGGCTGCTTTGCAGGTCACCTCTGCATCGATAATGTCATGTGAG +
Preference number: 5 (lower is better)
Translates to: KPSWKSLHLDMDTSI*AALQVTSASIMSCE
Trigger: CTCACATGACATTATCGATGCAGAGGTGACCTGCAAAGCAGCCCAAATGGAAGTGTCCATATCTAAGTGCAAGCTCTTCCAGCTCGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS-3UTR CAA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCTGCGGTGTTCATTCTaGGCCTCCACACTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGLRCSF*ASTLKK
Trigger: TTTCTTCAGTGTGGAGGCCAAGAATGAACACCGCAG...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTAAGTCGCAGCCGCACTaGTGCAGAGGGACGCACTGG +
Preference number: 5 (lower is better)
Translates to: EPKSLVTTVWEFYTREILKSQPH*CRGTHW
Trigger: CCAGTGCGTCCCTCTGCACAAGTGCGGCTGCGACTT...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTGCATCGGGCTTCTTCTaGTTGATGTCGATTTCCAAG +
Preference number: 5 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPASGFF*LMSISK
Trigger: CTTGGAAATCGACATCAACAAGAAGAAGCCCGATGC...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGAGATCTCCTCGAAAGTaGTCCAGCTTTCCAGGAACA +
Preference number: 5 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQRSPRK*SSFPGT
Trigger: TGTTCCTGGAAAGCTGGACAACTTTCGAGGAGATCT...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAACAGTACTCATCATCCTaGCAGGGAATGGTCTCGCAG +
Preference number: 5 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQQYSSS*QGMVSQ
Trigger: CTGCGAGACCATTCCCTGCAAGGATGATGAGTACTG...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGGCTGTGACAACAAACTaGGGGAAAGAGTCTGAGCTT +
Preference number: 5 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQAVTTN*GKESEL
Trigger: AAGCTCAGACTCTTTCCCCAAGTTTGTTGTCACAGC...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTAGCTCGCAAGTTCGGTaGGGACAGTCCGCCCCCACA +
Preference number: 5 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFSSQVR*GQSAPT
Trigger: TGTGGGGGCGGACTGTCCCAACCGAACTTGCGAGCT...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTCACAGCTCCCTGCCATaGCCCAGCTCGCAAGTTCGG +
Preference number: 5 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFHSSLP*PSSQVR
Trigger: CCGAACTTGCGAGCTGGGCAATGGCAGGGAGCTGTG...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTATGTTGCCAGTGTTGTaGGCGCTTTCGATCCAGAGT +
Preference number: 5 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPMLPVL*ALSIQS
Trigger: ACTCTGGATCGAAAGCGCCAACAACACTGGCAACAT...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCATGATGTTGCCAGTGTaGTTGGCGCTTTCGATCCAG +
Preference number: 5 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGMMLPV*LALSIQ
Trigger: CTGGATCGAAAGCGCCAACAACACTGGCAACATCAT...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAATCCCTGGTGATGATGTaGCCAGTGTTGTTGGCGCTT +
Preference number: 5 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQSLVMM*PVLLAL
Trigger: AAGCGCCAACAACACTGGCAACATCATCACCAGGGA...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCATGAAAATTCCACATaGATCGTGCGGTCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGHENST*IVRSLV
Trigger: CACCAGGGACCGCACGATCAATGTGGAATTTTCATG...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTGAGGCTCTGCAGCTCTaGCCGTCCTCCTGCAGGGTT +
Preference number: 5 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFEALQL*PSSCRV
Trigger: AACCCTGCAGGAGGACGGCAAGAGCTGCAGAGCCTC...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAGAGAACTGCAGCTCGTaGCAGCTCTTCTGCATGCCA +
Preference number: 5 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPENCSS*QLFCMP
Trigger: TGGCATGCAGAAGAGCTGCAACGAGCTGCAGTTCTC...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642222.1
ENST00000645008.1
CDS GCA 90 bp GACTTCCTCCCATGTCACAATGAAAACCCAAGTGGCAGAGAAGGTTaGCATGTCTTTGAAGTACTTCCTGATGTCCTTGGTGGCTCTTTT +
Preference number: 5 (lower is better)
Translates to: DFLPCHNENPSGREG*HVFEVLPDVLGGSF
Trigger: AAAAGAGCCACCAAGGACATCAGGAAGTACTTCAAAGACATGGCAACCTTCTCTGCCACTTGGGTTTTCATTGTGACATGGGAGGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 90 bp AGTCATCCAGTGGGTTTTTATTATAGTTTCCACAGAGTCCACAGGTaGAGTTTATATAGGAGCCTGGGACGGAAATGGAGGCGTAGTGCT +
Preference number: 5 (lower is better)
Translates to: SHPVGFYYSFHRVHR*SLYRSLGRKWRRSA
Trigger: AGCACTACGCCTCCATTTCCGTCCCAGGCTCCTATATAAACTCCACCTGTGGACTCTGTGGAAACTATAATAAAAACCCACTGGATGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCTGGCTCACTAGCACATaGAAGGAAACAACTCCGTTG +
Preference number: 5 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGWLTST*KETTPL
Trigger: CAACGGAGTTGTTTCCTTCAATGTGCTAGTGAGCCA...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAACTGCGGTGTTCATTCTaGGCCTCCACACTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQLRCSF*ASTLKK
Trigger: TTTCTTCAGTGTGGAGGCCAAGAATGAACACCGCAG...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTCTCCTCGCACAGGCATaGCACAGTGCAGTTGGCCGT +
Preference number: 5 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFLLAQA*HSAVGR
Trigger: ACGGCCAACTGCACTGTGCAATGCCTGTGCGAGGAG...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTCTCCTCGCACAGGCATaGCACAGTGCAGTTGGCCGT +
Preference number: 5 (lower is better)
Translates to: EPKSLVTTVWEFYTREILLLAQA*HSAVGR
Trigger: ACGGCCAACTGCACTGTGCAATGCCTGTGCGAGGAG...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCACAGTACTCATCATCCTaGCAGGGAATGGTCTCGCAG +
Preference number: 5 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPQYSSS*QGMVSQ
Trigger: CTGCGAGACCATTCCCTGCAAGGATGATGAGTACTG...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCACACAGCTGCTGCACTTaGGAGAAACCTTCCACCTTG +
Preference number: 5 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPHSCCT*EKPSTL
Trigger: CAAGGTGGAAGGTTTCTCCAAAGTGCAGCAGCTGTG...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTGACCACTTGTCGAAGTaGATGATAAGCTGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPDHLSK*MISWKE
Trigger: CTCCTTCCAGCTTATCATCAACTTCGACAAGTGGTC...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTTCTGGATGTGCACATaGTCACACATGGCTGCATAC +
Preference number: 5 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPFWMCT*SHMAAY
Trigger: GTATGCAGCCATGTGTGACAATGTGCACATCCAGAA...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp ATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGATGATATGCGTGCCATaGGACTGCACAATGTTTCCA +
Preference number: 5 (lower is better)
Translates to: IGHFQTPARFLRGSQTFQMICVP*DCTMFP
Trigger: TGGAAACATTGTGCAGTCCAATGGCACGCATATCAT...CTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCATCCCTGGTGATGATGTaGCCAGTGTTGTTGGCGCTT +
Preference number: 5 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPSLVMM*PVLLAL
Trigger: AAGCGCCAACAACACTGGCAACATCATCACCAGGGA...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTGTTCTTTGGGCTCTTTaGTGTAATCTGTGGCAATCC +
Preference number: 5 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPVLWAL*CNLWQS
Trigger: GGATTGCCACAGATTACACAAAAGAGCCCAAAGAAC...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTGCAGGTGGCATCATTTaGAGATGCTGGACACTTTCA +
Preference number: 5 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPAGGII*RCWTLS
Trigger: TGAAAGTGTCCAGCATCTCAAAATGATGCCACCTGC...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS TCA 90 bp CACAACAGAATCCAAGGAGATCTTGATATCCAGCTCATAAGCACATaGAAATTCCACATTGATCGTGCGGTCCCTGGTGATGATGTTGCC +
Preference number: 5 (lower is better)
Translates to: HNRIQGDLDIQLIST*KFHIDRAVPGDDVA
Trigger: GGCAACATCATCACCAGGGACCGCACGATCAATGTGGAATTTTCATGTGCTTATGAGCTGGATATCAAGATCTCCTTGGATTCTGTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS TCA 90 bp GGAGCTTATCATTGCTATCTCGGGTGGGTGTGGCATAGCATTTGTTaGGTGTTAGGATTAAATGTGTGGCGTCAGCTCCAACCACAAAAA +
Preference number: 5 (lower is better)
Translates to: GAYHCYLGWVWHSIC*VLGLNVWRQLQPQK
Trigger: TTTTTGTGGTTGGAGCTGACGCCACACATTTAATCCTAACACTCAACAAATGCTATGCCACACCCACCCGAGATAGCAATGATAAGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS TCA 90 bp TGCCATAATGAAATCTGGATCATGATGAGAAGAAGCGTCCAGACTTaGAGTTCCATTGAAGAATTAGAGGCTCTGCAGCTCTTGCCGTCC +
Preference number: 5 (lower is better)
Translates to: CHNEIWIMMRRSVQT*SSIEELEALQLLPS
Trigger: GGACGGCAAGAGCTGCAGAGCCTCTAATTCTTCAATGGAACTTCAAGTCTGGACGCTTCTTCTCATCATGATCCAGATTTCATTATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000646278.1
CDS GCA 90 bp TATGAATTTAAAGACGGTGACGTGAAAGCGACAGGTCAGGGAGACTaGATTCTCCTCGATGCCAATGGTGTTATCTTTGAGGTTCTGACA +
Preference number: 5 (lower is better)
Translates to: YEFKDGDVKATGQGD*ILLDANGVIFEVLT
Trigger: TGTCAGAACCTCAAAGATAACACCATTGGCATCGAGGAGAATGCAGTCTCCCTGACCTGTCGCTTTCACGTCACCGTCTTTAAATTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CCA 90 bp AAACCCCTCACTGCTGTAGATTTTGGTTGCCAAACCAGTTATAAATaGAACATTCACTTGTGTGCCATTCACCTTGACCGTGTTCCGGTC +
Preference number: 5 (lower is better)
Translates to: KPLTAVDFGCQTSYK*NIHLCAIHLDRVPV
Trigger: GACCGGAACACGGTCAAGGTGAATGGCACACAAGTGAATGTTCCATTTATAACTGGTTTGGCAACCAAAATCTACAGCAGTGAGGGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS-3UTR CAA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTTCCGTGCACTTGCCGTaGGGGAGACAGAACTCGTCA +
Preference number: 5 (lower is better)
Translates to: EPKSLVTTVWEFYTREILSVHLP*GRQNSS
Trigger: TGACGAGTTCTGTCTCCCCAACGGCAAGTGCACGGA...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTAGCTCCGAGTCATTGTaGCAGGCCTTCAGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: EPKSLVTTVWEFYTREILSSESL*QAFSRS
Trigger: GGACCTGCTGAAGGCCTGCAACAATGACTCGGAGCT...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTAGCAGCTCCGAGTCATaGTTGCAGGCCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFSSSES*LQAFSR
Trigger: CCTGCTGAAGGCCTGCAACAATGACTCGGAGCTGCT...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAGACCACTTGTCGAAGTaGATGATAAGCTGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQDHLSK*MISWKE
Trigger: CTCCTTCCAGCTTATCATCAACTTCGACAAGTGGTC...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCATATCGGAGCTTATCATaGCTATCTCGGGTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPYRSLS*LSRVGV
Trigger: CACACCCACCCGAGATAGCAATGATAAGCTCCGATA...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCGTGGCAATCCTGGAATaGTGTGGGCAAGTGATTTTA +
Preference number: 5 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGVAILE*CGQVIL
Trigger: TAAAATCACTTGCCCACACAATTCCAGGATTGCCAC...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GTCAACAATATCCCCAGTGGCCAAAGCTGCCATGGCAAGGTTGAAGGACACAGTTCTAGTGACAACTGTTaGGGAATTTTACACAAGAGA +
Preference number: 5 (lower is better)
Translates to: VNNIPSGQSCHGKVEGHSSSDNC*GILHKR
Trigger: TCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGA...ACTGTGTCCTTCAACCTTGCCATGGCAGCTTTGGCCACTGGGGATATTGTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS TCA 90 bp CTCAGTTCCAAAGTGCATATCCTTAAATTGCTACTCAATTTGCTCTaGCTTCTAGGGAGTTGGAAGACTGGCCTTCCCAGAGCAATCAAG +
Preference number: 5 (lower is better)
Translates to: LSSKVHILKLLLNLL*LLGSWKTGLPRAIK
Trigger: CTTGATTGCTCTGGGAAGGCCAGTCTTCCAACTCCCTAGAAGTCAGAGCAAATTGAGTAGCAATTTAAGGATATGCACTTTGGAACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478058.1
CDS GCA 90 bp GCTGGTGTCAATCACCAGAAACCCCTCACTGCTGTAGATTTTGGTTaGCAAACCAGTTATAAATGGAACATTCACTTGTGTGCCATTCAC +
Preference number: 5 (lower is better)
Translates to: AGVNHQKPLTAVDFG*QTSYKWNIHLCAIH
Trigger: GTGAATGGCACACAAGTGAATGTTCCATTTATAACTGGTTTGGCAACCAAAATCTACAGCAGTGAGGGGTTTCTGGTGATTGACACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CCA 90 bp TGTACAATAGACCTATGTCTGAGTACTGGACAGTCACCACGCCCTTaGACTCCACTGTCGTACTGTTTTTGTTTCGATAAATTTCCAGCT +
Preference number: 5 (lower is better)
Translates to: CTIDLCLSTGQSPRP*TPLSYCFCFDKFPA
Trigger: AGCTGGAAATTTATCGAAACAAAAACAGTACGACAGTGGAGTCCAAGGGCGTGGTGACTGTCCAGTACTCAGACATAGGTCTATTGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp AGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCCCTCTCTTCTACTTTAGGGGTTTaGGTGTCATTCTGCCAAAAT +
Preference number: 5 (lower is better)
Translates to: RESNLPVITSKSFQQALSSTLGV*VSFCQN
Trigger: ATTTTGGCAGAATGACACCAAAACCCCTAAAGTAGA...AGAGAGGGCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACTCGCCTCGAATTCCATaGTGCACATCTGCCCAAAAT +
Preference number: 5 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNSPRIP*CTSAQN
Trigger: ATTTTGGGCAGATGTGCACAATGGAATTCGAGGCGA...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTTGGAATGCCAAGGGCTaGGCACACAAGAGCATAGGC +
Preference number: 5 (lower is better)
Translates to: EPKSLVTTVWEFYTREILWNAKG*AHKSIG
Trigger: GCCTATGCTCTTGTGTGCCAAGCCCTTGGCATTCCA...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTTGGAATGCCAAGGGCTaGGCACACAAGAGCATAGGC +
Preference number: 5 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFWNAKG*AHKSIG
Trigger: GCCTATGCTCTTGTGTGCCAAGCCCTTGGCATTCCA...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACGCTGTGACAACAAACTaGGGGAAAGAGTCTGAGCTT +
Preference number: 5 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNAVTTN*GKESEL
Trigger: AAGCTCAGACTCTTTCCCCAAGTTTGTTGTCACAGC...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACGACCACTTGTCGAAGTaGATGATAAGCTGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNDHLSK*MISWKE
Trigger: CTCCTTCCAGCTTATCATCAACTTCGACAAGTGGTC...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp TCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACAGGCAAATGGAACATTCACTaGTGTGCCATTCACCTTGAC +
Preference number: 5 (lower is better)
Translates to: SLEGVKPSSHHFKIVPTGKWNIH*CAIHLD
Trigger: GTCAAGGTGAATGGCACACAAGTGAATGTTCCATTT...GCCTGTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTGTTCTCCTCAACTTGTaGCCAATAATTTCTGATTCC +
Preference number: 5 (lower is better)
Translates to: RRSDTSKHQQDSLEGVKPVLLNL*PIISDS
Trigger: GGAATCAGAAATTATTGGCAACAAGTTGAGGAGAAC...AGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392793.6
CDS-3UTR CAA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTAAGCCCCCTGTGCAATaGAAGTATGTGGTGGACAGC +
Preference number: 5 (lower is better)
Translates to: EPKSLVTTVWEFYTREILKPPVQ*KYVVDS
Trigger: GCTGTCCACCACATACTTCAATTGCACAGGGGGCTT...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTCTCATTGGTGGCAAGTaGGTGCCCCTCAAAGTTGCA +
Preference number: 5 (lower is better)
Translates to: EPKSLVTTVWEFYTREILLIGGK*VPLKVA
Trigger: TGCAACTTTGAGGGGCACCAACTTGCCACCAATGAG...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp GAACCAAAGTCTCTAGTGACAACTGTTTGGGAATTTTACACAAGAGAGATACTTACCGTGTTCCGGTCGTaGATGAGAATCTGCTCTTCG +
Preference number: 5 (lower is better)
Translates to: EPKSLVTTVWEFYTREILTVFRS*MRICSS
Trigger: CGAAGAGCAGATTCTCATCAACGACCGGAACACGGT...AAGTATCTCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGAGACTTTGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAGTGGCAATCCTGGAATaGTGTGGGCAAGTGATTTTA +
Preference number: 5 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPVAILE*CGQVIL
Trigger: TAAAATCACTTGCCCACACAATTCCAGGATTGCCAC...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp AGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCAACGTTCTTTGGGCTCTTTaGTGTAATCTGTGGCAATCC +
Preference number: 5 (lower is better)
Translates to: RFLRGSQTFQSSLQNRSNVLWAL*CNLWQS
Trigger: GGATTGCCACAGATTACACAAAAGAGCCCAAAGAAC...GTTGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS CCA 90 bp GCTGATTTTAATGACGTTGAAACCATTGTAGTATATCTGGATGTCTaGGCTGGTGTCAATCACCAGAAACCCCTCACTGCTGTAGATTTT +
Preference number: 5 (lower is better)
Translates to: ADFNDVETIVVYLDV*AGVNHQKPLTAVDF
Trigger: AAAATCTACAGCAGTGAGGGGTTTCTGGTGATTGACACCAGCCCAGACATCCAGATATACTACAATGGTTTCAACGTCATTAAAATCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS-3UTR CAA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTATGATGTTGCCAGTGTaGTTGGCGCTTTCGATCCAG +
Preference number: 5 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFMMLPV*LALSIQ
Trigger: CTGGATCGAAAGCGCCAACAACACTGGCAACATCAT...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp ACAGAACACGTGCATAACGTAGATCGGACACTTCCAAACACCAGCAAGATTCCTTCAGTTCTCCTCAACTaGTTGCCAATAATTTCTGAT +
Preference number: 5 (lower is better)
Translates to: TEHVHNVDRTLPNTSKIPSVLLN*LPIISD
Trigger: ATCAGAAATTATTGGCAACAAGTTGAGGAGAACTGA...AGGAATCTTGCTGGTGTTTGGAAGTGTCCGATCTACGTTATGCACGTGTTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392793.6
CDS GCA 90 bp TTTGATTATGCTAACCTTAACTGTCAAGGAATAGAAAAAGCAATGTaGACAGCCCAGGAGACACCTTACCTTAGCATAGGCTTCACAACA +
Preference number: 5 (lower is better)
Translates to: FDYANLNCQGIEKAM*TAQETPYLSIGFTT
Trigger: TGTTGTGAAGCCTATGCTAAGGTAAGGTGTCTCCTGGGCTGTGCACATTGCTTTTTCTATTCCTTGACAGTTAAGGTTAGCATAATCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646278.1
CDS-3UTR CAA 90 bp CAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAAAATCGTTCCATCTACTTTAGGGGTTTaGGTGTCATTCTGCCAAAAT +
Preference number: 5 (lower is better)
Translates to: QDSLEGVKPSSHHFKIVPSTLGV*VSFCQN
Trigger: ATTTTGGCAGAATGACACCAAAACCCCTAAAGTAGA...TGGAACGATTTTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTTTCTGGATGTGCACATaGTCACACATGGCTGCATAC +
Preference number: 5 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFFWMCT*SHMAAY
Trigger: GTATGCAGCCATGTGTGACAATGTGCACATCCAGAA...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS-3UTR CAA 90 bp CAAACACCAGCAAGATTCCTTAGAGGGAGTCAAACCTTCCAGTCATCACTTCAATCTAGTGACAACTGTTaGGGAATTTTACACAAGAGA +
Preference number: 5 (lower is better)
Translates to: QTPARFLRGSQTFQSSLQSSDNC*GILHKR
Trigger: TCTCTTGTGTAAAATTCCCAAACAGTTGTCACTAGA...TTGAAGTGATGACTGGAAGGTTTGACTCCCTCTAAGGAATCTTGCTGGTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS CCA 90 bp GTTTTTGTAGAGAGCCATCTTGGTGATGAAGCTGCCTTCTTGGGTTaGAACTGTCAGGTTAATTACACTAAAACGGAAACAATTATGAGA +
Preference number: 5 (lower is better)
Translates to: VFVESHLGDEAAFLG*NCQVNYTKTETIMR
Trigger: TCTCATAATTGTTTCCGTTTTAGTGTAATTAACCTGACAGTTCCAACCCAAGAAGGCAGCTTCATCACCAAGATGGCTCTCTACAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646278.1
CDS-3UTR CAA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTTACTTCCTGATGTCCTaGGTGGCTCTTTTCAAGATG +
Preference number: 5 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFYFLMS*VALFKM
Trigger: CATCTTGAAAAGAGCCACCAAGGACATCAGGAAGTA...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392793.6
ENST00000642222.1
CDS-3UTR CAA 90 bp GGGCACACACTTTTTATCCTACAGGGTGTTGAAGTAAGTAAATTACAGTACTTTGTTCTTTGGGCTCTTTaGTGTAATCTGTGGCAATCC +
Preference number: 5 (lower is better)
Translates to: GHTLFILQGVEVSKLQYFVLWAL*CNLWQS
Trigger: GGATTGCCACAGATTACACAAAAGAGCCCAAAGAAC...AAAGTACTGTAATTTACTTACTTCAACACCCTGTAGGATAAAAAGTGTGTGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS TCA 90 bp GGAATATTTCCATCGTCACAGAGAGTTCTATTGAACAATGTTGGTTaGAAGCATTTAGGCTCAAGAAACGTGAATTATGTTTTTCCTAGG +
Preference number: 5 (lower is better)
Translates to: GIFPSSQRVLLNNVG*KHLGSRNVNYVFPR
Trigger: CCTAGGAAAAACATAATTCACGTTTCTTGAGCCTAAATGCTTTCAACCAACATTGTTCAATAGAACTCTCTGTGACGATGGAAATATTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646278.1
CDS TCA 72 bp CCACGGCGCACACCTCCCCGCTGCCGCAGGTCTTGTTaGAGCAGTAGACGTCCCCGCCCTCCTCGCACAGGC +
Preference number: 6 (lower is better)
Translates to: PRRTPPRCRRSC*SSRRPRPPRTG
Trigger: GCCTGTGCGAGGAGGGCGGGGACGTCTACTGCTTCAACAAGACCTGCGGCAGCGGGGAGGTGTGCGCCGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp AGCCCTGGTTGCACTCGCAGCCCTCTGTGCACGGCGTaGCGCAGTTCCGCGAGGCCGTCAGGTCGGAGCATG +
Preference number: 6 (lower is better)
Translates to: SPGCTRSPLCTA*RSSARPSGRSM
Trigger: CATGCTCCGACCTGACGGCCTCGCGGAACTGCGCCACGCCGTGCACAGAGGGCTGCGAGTGCAACCAGGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 72 bp CAGCGTCGCAGTGACAGCCCTCCACGCAGTAGTGGCTaGAGTCACTCTTCAGGCGGATGGCGGCGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: QRRSDSPPRSSG*SHSSGGWRRSG
Trigger: CCCGCTGCGCCGCCATCCGCCTGAAGAGTGACTGCAGCCACTACTGCGTGGAGGGCTGTCACTGCGACGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CCA 72 bp CCACGCAGTAGTGGCTGCAGTCACTCTTCAGGCGGATaGCGGCGCAGCGGGGCTGGCAGACACTCACGCAGC +
Preference number: 6 (lower is better)
Translates to: PRSSGCSHSSGG*RRSGAGRHSRS
Trigger: GCTGCGTGAGTGTCTGCCAGCCCCGCTGCGCCGCCATCCGCCTGAAGAGTGACTGCAGCCACTACTGCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CAA 90 bp TTGTGCAGAGGGACGCACTGGCTGGTGCTGAGGACGAAGCCCTGGTaGCACTCGCAGCCCTCTGTGCACGGCGTGGCGCAGTTCCGCGAG +
Preference number: 6 (lower is better)
Translates to: LCRGTHWLVLRTKPW*HSQPSVHGVAQFRE
Trigger: CTCGCGGAACTGCGCCACGCCGTGCACAGAGGGCTGCGAGTGCAACCAGGGCTTCGTCCTCAGCACCAGCCAGTGCGTCCCTCTGCACAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 72 bp GAGTCTGGCAGGTGCTGGCGTAGTTCTGCAGCCAGCTaGAGGCGGTCTGCACCGCGCCCCCATCGATGCAAG +
Preference number: 6 (lower is better)
Translates to: ESGRCWRSSAAS*RRSAPRPHRCK
Trigger: CTTGCATCGATGGGGGCGCGGTGCAGACCGCCTGCAGCTGGCTGCAGAACTACGCCAGCACCTGCCAGACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000478058.1
ENST00000642222.1
ENST00000645008.1
CDS GCA 72 bp GGGGTGGCTCGATGCAGCCACACAGCTCCCTGCCATTaGCCAGCTCGCAAGTTCGGTTGGGACAGTCCGCCC +
Preference number: 6 (lower is better)
Translates to: GVARCSHTAPCH*PARKFGWDSPP
Trigger: GGGCGGACTGTCCCAACCGAACTTGCGAGCTGGGCAATGGCAGGGAGCTGTGTGGCTGCATCGAGCCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CAA 72 bp GGGGGTGGCTCGATGCAGCCACACAGCTCCCTGCCATaGCCCAGCTCGCAAGTTCGGTTGGGACAGTCCGCC +
Preference number: 6 (lower is better)
Translates to: GGGSMQPHSSLP*PSSQVRLGQSA
Trigger: GGCGGACTGTCCCAACCGAACTTGCGAGCTGGGCAATGGCAGGGAGCTGTGTGGCTGCATCGAGCCACCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS TCA 72 bp AGGCGCCGTCAAAGGTGTGCAGCACCTGGTTCTGGCTaGGCAGGCACACGGTCTCCCGCTTGGGGAAGCAGC +
Preference number: 6 (lower is better)
Translates to: RRRQRCAAPGSG*AGTRSPAWGSS
Trigger: GCTGCTTCCCCAAGCGGGAGACCGTGTGCCTGCTCAGCCAGAACCAGGTGCTGCACACCTTTGACGGCGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS TCA 72 bp AGCCGCAGCTGTGGGGCAGGATGCAGCTCTTGCCGTTaGGGACGTAGCCAGCGTCGCAGTGACAGCCCTCCA +
Preference number: 6 (lower is better)
Translates to: SRSCGAGCSSCR*GRSQRRSDSPP
Trigger: TGGAGGGCTGTCACTGCGACGCTGGCTACGTCCTCAACGGCAAGAGCTGCATCCTGCCCCACAGCTGCGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS TCA 72 bp GCCGCGCACCCCGTTGCGCAGCGCACACTCCTCGTCTaGCTTGCATTGGCGCGGGTCGCACTGAATCACGTT +
Preference number: 6 (lower is better)
Translates to: AAHPVAQRTLLV*LALARVALNHV
Trigger: AACGTGATTCAGTGCGACCCGCGCCAATGCAAGTCAGACGAGGAGTGTGCGCTGCGCAACGGGGTGCGCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS GCA 72 bp AGACGTCCCCGCCCTCCTCGCACAGGCATTGCACAGTaGAGTTGGCCGTGGCCCAGAAGAACTCCCCCATGG +
Preference number: 6 (lower is better)
Translates to: RRPRPPRTGIAQ*SWPWPRRTPPW
Trigger: CCATGGGGGAGTTCTTCTGGGCCACGGCCAACTGCACTGTGCAATGCCTGTGCGAGGAGGGCGGGGACGTCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 72 bp AGGTCCGCCAGGGCCCCACCTCCACGTCCGCATTCTTaGAGGCGCTTGCATACCGGGCCACAGAGTCACAGA +
Preference number: 6 (lower is better)
Translates to: RSARAPPPRPHS*RRLHTGPQSHR
Trigger: TCTGTGACTCTGTGGCCCGGTATGCAAGCGCCTGCAAGAATGCGGACGTGGAGGTGGGGCCCTGGCGGACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS GCA 72 bp CTGACTTGCATTGGCGCGGGTCGCACTGAATCACGTTaGGACGGAAACAGCGGCAGCGCCGCGTGCAGTCGC +
Preference number: 6 (lower is better)
Translates to: LTCIGAGRTESR*DGNSGSAACSR
Trigger: GCGACTGCACGCGGCGCTGCCGCTGTTTCCGTCGCAACGTGATTCAGTGCGACCCGCGCCAATGCAAGTCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CCA 72 bp TTGGCACAGGACGGACAGCGGTCCCCACAGCCCACCTaGCAGAAGGTGTCCCTCTTCACCCAGCTCTGCCCA +
Preference number: 6 (lower is better)
Translates to: LAQDGQRSPQPT*QKVSLFTQLCP
Trigger: TGGGCAGAGCTGGGTGAAGAGGGACACCTTCTGCCAGGTGGGCTGTGGGGACCGCTGTCCGTCCTGTGCCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000478058.1
ENST00000642222.1
ENST00000645008.1
CDS TCA 72 bp GGGGAAGCCATCAAAGGTGAGGTAGTGGCCGTAGCCTaGGACGATGCAGGAGGCGTCGGTGCGGGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: GEAIKGEVVAVA*DDAGGVGAGLA
Trigger: TGCCAAGCCCGCACCGACGCCTCCTGCATCGTCTCAGGCTACGGCCACTACCTCACCTTTGATGGCTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS TCA 72 bp CACTCCTCGTCTGACTTGCATTGGCGCGGGTCGCACTaGATCACGTTGCGACGGAAACAGCGGCAGCGCCGC +
Preference number: 6 (lower is better)
Translates to: HSSSDLHWRGSH*ITLRRKQRQRR
Trigger: GCGGCGCTGCCGCTGTTTCCGTCGCAACGTGATTCAGTGCGACCCGCGCCAATGCAAGTCAGACGAGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS GCA 72 bp GCACCCCGTTGCGCAGCGCACACTCCTCGTCTGACTTaGATTGGCGCGGGTCGCACTGAATCACGTTGCGAC +
Preference number: 6 (lower is better)
Translates to: APRCAAHTPRLT*IGAGRTESRCD
Trigger: GTCGCAACGTGATTCAGTGCGACCCGCGCCAATGCAAGTCAGACGAGGAGTGTGCGCTGCGCAACGGGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CCA 72 bp ACACACGCCAGCTCTCTCCCAGATCCAGGACAGACATaGCCGGCCTGCCATCCGGGCGGAGGAAGTCATCCA +
Preference number: 6 (lower is better)
Translates to: THASSLPDPGQT*PACHPGGGSHP
Trigger: TGGATGACTTCCTCCGCCCGGATGGCAGGCCGGCCATGTCTGTCCTGGATCTGGGAGAGAGCTGGCGTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp TCGAAGTCGCAGCCGCACTTGTGCAGAGGGACGCACTaGCTGGTGCTGAGGACGAAGCCCTGGTTGCACTCG +
Preference number: 6 (lower is better)
Translates to: SKSQPHLCRGTH*LVLRTKPWLHS
Trigger: CGAGTGCAACCAGGGCTTCGTCCTCAGCACCAGCCAGTGCGTCCCTCTGCACAAGTGCGGCTGCGACTTCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp CCCCGCCCTCCTCGCACAGGCATTGCACAGTGCAGTTaGCCGTGGCCCAGAAGAACTCCCCCATGGTGTAGT +
Preference number: 6 (lower is better)
Translates to: PRPPRTGIAQCS*PWPRRTPPWCS
Trigger: ACTACACCATGGGGGAGTTCTTCTGGGCCACGGCCAACTGCACTGTGCAATGCCTGTGCGAGGAGGGCGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CAA 90 bp GGGATCAGGCTGCACAGCTGCTGCACTTTGGAGAAACCTTCCACCTaGGCACAGGACGGACAGCGGTCCCCACAGCCCACCTGGCAGAAG +
Preference number: 6 (lower is better)
Translates to: GIRLHSCCTLEKPST*AQDGQRSPQPTWQK
Trigger: CTTCTGCCAGGTGGGCTGTGGGGACCGCTGTCCGTCCTGTGCCAAGGTGGAAGGTTTCTCCAAAGTGCAGCAGCTGTGCAGCCTGATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000478058.1
ENST00000642222.1
ENST00000645008.1
CDS GCA 72 bp GCAGTTGTCGACGCAGCCGGAGTCGCACTTCCAGTCTaGGTGGTACACACGCCAGCTCTCTCCCAGATCCAG +
Preference number: 6 (lower is better)
Translates to: AVVDAAGVALPV*VVHTPALSQIQ
Trigger: CTGGATCTGGGAGAGAGCTGGCGTGTGTACCACGCAGACTGGAAGTGCGACTCCGGCTGCGTCGACAACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp CAGTGCAGTTGGCCGTGGCCCAGAAGAACTCCCCCATaGTGTAGTAGTGGCCGTCGAAGTCGCAGCCGCACT +
Preference number: 6 (lower is better)
Translates to: QCSWPWPRRTPP*CSSGRRSRSRT
Trigger: AGTGCGGCTGCGACTTCGACGGCCACTACTACACCATGGGGGAGTTCTTCTGGGCCACGGCCAACTGCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp ACTTCCGAAGCCCCGATGCCTCCTATCTTGACCTCCTaGTCGGCCACCAGGATCCGAAGTCCCCGCAGCCAA +
Preference number: 6 (lower is better)
Translates to: TSEAPMPPILTS*SATRIRSPRSQ
Trigger: TTGGCTGCGGGGACTTCGGATCCTGGTGGCCGACCAGGAGGTCAAGATAGGAGGCATCGGGGCTTCGGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CAA 72 bp GAAGCAGTAGACGTCCCCGCCCTCCTCGCACAGGCATaGCACAGTGCAGTTGGCCGTGGCCCAGAAGAACTC +
Preference number: 6 (lower is better)
Translates to: EAVDVPALLAQA*HSAVGRGPEEL
Trigger: GAGTTCTTCTGGGCCACGGCCAACTGCACTGTGCAATGCCTGTGCGAGGAGGGCGGGGACGTCTACTGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CAA 72 bp ACGTTCACCACCCCATGGCACTCCAGGAAGGAGCTGTaGGAGGGGTCGTTGATGATGCCGCACCTGGAGCGG +
Preference number: 6 (lower is better)
Translates to: TFTTPWHSRKEL*EGSLMMPHLER
Trigger: CCGCTCCAGGTGCGGCATCATCAACGACCCCTCCAACAGCTCCTTCCTGGAGTGCCATGGGGTGGTGAACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS CAA 72 bp CTGCACAGCTGCTGCACTTTGGAGAAACCTTCCACCTaGGCACAGGACGGACAGCGGTCCCCACAGCCCACC +
Preference number: 6 (lower is better)
Translates to: LHSCCTLEKPST*AQDGQRSPQPT
Trigger: GGTGGGCTGTGGGGACCGCTGTCCGTCCTGTGCCAAGGTGGAAGGTTTCTCCAAAGTGCAGCAGCTGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000478058.1
ENST00000642222.1
ENST00000645008.1
CDS CAA 72 bp CACAGCTCCCTGCCATTGCCCAGCTCGCAAGTTCGGTaGGGACAGTCCGCCCCCACACAGGGATCTTCAACC +
Preference number: 6 (lower is better)
Translates to: HSSLPLPSSQVR*GQSAPTQGSST
Trigger: GGTTGAAGATCCCTGTGTGGGGGCGGACTGTCCCAACCGAACTTGCGAGCTGGGCAATGGCAGGGAGCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CAA 90 bp GGTCTTGTTGAAGCAGTAGACGTCCCCGCCCTCCTCGCACAGGCATaGCACAGTGCAGTTGGCCGTGGCCCAGAAGAACTCCCCCATGGT +
Preference number: 6 (lower is better)
Translates to: GLVEAVDVPALLAQA*HSAVGRGPEELPHG
Trigger: ACCATGGGGGAGTTCTTCTGGGCCACGGCCAACTGCACTGTGCAATGCCTGTGCGAGGAGGGCGGGGACGTCTACTGCTTCAACAAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CAA 90 bp ATGCAGCCACACAGCTCCCTGCCATTGCCCAGCTCGCAAGTTCGGTaGGGACAGTCCGCCCCCACACAGGGATCTTCAACCACTCCTGAG +
Preference number: 6 (lower is better)
Translates to: MQPHSSLPLPSSQVR*GQSAPTQGSSTTPE
Trigger: CTCAGGAGTGGTTGAAGATCCCTGTGTGGGGGCGGACTGTCCCAACCGAACTTGCGAGCTGGGCAATGGCAGGGAGCTGTGTGGCTGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CAA 90 bp CCAGCTGCCTGCCCCAGGGTAGAAGAGTGTCTACCTCTGCAGCTCTaGCCGTCCTCCTGCAGGGTTCCTGTTACACAGCTGCAGAGAGGC +
Preference number: 6 (lower is better)
Translates to: PAACPRVEECLPLQL*PSSCRVPVTQLQRG
Trigger: GCCTCTCTGCAGCTGTGTAACAGGAACCCTGCAGGAGGACGGCAAGAGCTGCAGAGGTAGACACTCTTCTACCCTGGGGCAGGCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645008.1
CDS TCA 72 bp GGCACAGGCGGAAAAGGCAGGTGCGGTAATAGGCAGTaGCGTTCACCACCCCATGGCACTCCAGGAAGGAGC +
Preference number: 6 (lower is better)
Translates to: GTGGKGRCGNRQ*RSPPHGTPGRS
Trigger: GCTCCTTCCTGGAGTGCCATGGGGTGGTGAACGTCACTGCCTATTACCGCACCTGCCTTTTCCGCCTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS GCA 72 bp AGCTCTCTCCCAGATCCAGGACAGACATGGCCGGCCTaGCATCCGGGCGGAGGAAGTCATCCAGTGGGTTTT +
Preference number: 6 (lower is better)
Translates to: SSLPDPGQTWPA*HPGGGSHPVGF
Trigger: AAAACCCACTGGATGACTTCCTCCGCCCGGATGGCAGGCCGGCCATGTCTGTCCTGGATCTGGGAGAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 72 bp CAAAGTAGAGGGCTTCAGTGGCAGCGTCGCACTGGGTaGAGTTGTCGACGCAGCCGGAGTCGCACTTCCAGT +
Preference number: 6 (lower is better)
Translates to: QSRGLQWQRRTG*SCRRSRSRTSS
Trigger: ACTGGAAGTGCGACTCCGGCTGCGTCGACAACTGCACCCAGTGCGACGCTGCCACTGAAGCCCTCTACTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 72 bp CTGCAGAGAGGCCCATCCACCCGGCTCGTGCAAATCTaGTCACACCCTCCATTGTCCTCACACCAGTCCAGC +
Preference number: 6 (lower is better)
Translates to: LQRGPSTRLVQI*SHPPLSSHQSS
Trigger: GCTGGACTGGTGTGAGGACAATGGAGGGTGTGAGCAGATTTGCACGAGCCGGGTGGATGGGCCTCTCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CCA 72 bp TTGTCGACGCAGCCGGAGTCGCACTTCCAGTCTGCGTaGTACACACGCCAGCTCTCTCCCAGATCCAGGACA +
Preference number: 6 (lower is better)
Translates to: LSTQPESHFQSA*YTRQLSPRSRT
Trigger: TGTCCTGGATCTGGGAGAGAGCTGGCGTGTGTACCACGCAGACTGGAAGTGCGACTCCGGCTGCGTCGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp AGCCGCAGTAGTCAGAGCCAAAGTAGAGGGCTTCAGTaGCAGCGTCGCACTGGGTGCAGTTGTCGACGCAGC +
Preference number: 6 (lower is better)
Translates to: SRSSQSQSRGLQ*QRRTGCSCRRS
Trigger: GCTGCGTCGACAACTGCACCCAGTGCGACGCTGCCACTGAAGCCCTCTACTTTGGCTCTGACTACTGCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp CCTCCTCGCACAGGCATTGCACAGTGCAGTTGGCCGTaGCCCAGAAGAACTCCCCCATGGTGTAGTAGTGGC +
Preference number: 6 (lower is better)
Translates to: PPRTGIAQCSWP*PRRTPPWCSSG
Trigger: GCCACTACTACACCATGGGGGAGTTCTTCTGGGCCACGGCCAACTGCACTGTGCAATGCCTGTGCGAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp CCGTGCACTTGCCGTTGGGGAGACAGAACTCGTCACTaGCGTTGGCATTGTAGAAGCCGCACAAGCCCCCTG +
Preference number: 6 (lower is better)
Translates to: PCTCRWGDRTRH*RWHCRSRTSPL
Trigger: CAGGGGGCTTGTGCGGCTTCTACAATGCCAACGCCAGTGACGAGTTCTGTCTCCCCAACGGCAAGTGCACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp TGCACAGCTGCTGCACTTTGGAGAAACCTTCCACCTTaGCACAGGACGGACAGCGGTCCCCACAGCCCACCT +
Preference number: 6 (lower is better)
Translates to: CTAAALWRNLPP*HRTDSGPHSPP
Trigger: AGGTGGGCTGTGGGGACCGCTGTCCGTCCTGTGCCAAGGTGGAAGGTTTCTCCAAAGTGCAGCAGCTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000478058.1
ENST00000642222.1
ENST00000645008.1
CDS CCA 72 bp GCTGGAAGGAGATGTCGGGCAGTTTCTGGCAGATGGTaGACAGCACGAAGGCGCAGTTGGCTGGGAAGCGCA +
Preference number: 6 (lower is better)
Translates to: AGRRCRAVSGRW*TARRRSWLGSA
Trigger: TGCGCTTCCCAGCCAACTGCGCCTTCGTGCTGTCCACCATCTGCCAGAAACTGCCCGACATCTCCTTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CCA 72 bp ACAGCTCCCTGCCATTGCCCAGCTCGCAAGTTCGGTTaGGACAGTCCGCCCCCACACAGGGATCTTCAACCA +
Preference number: 6 (lower is better)
Translates to: TAPCHCPARKFG*DSPPPHRDLQP
Trigger: TGGTTGAAGATCCCTGTGTGGGGGCGGACTGTCCCAACCGAACTTGCGAGCTGGGCAATGGCAGGGAGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS TCA 72 bp GGTGCCCCTCAAAGTTGCAGCCACACTCACTCCGCGTaGCACACTGGCTGCCCAGTAGAGCATAGCCCTCAT +
Preference number: 6 (lower is better)
Translates to: GAPQSCSHTHSA*HTGCPVEHSPH
Trigger: ATGAGGGCTATGCTCTACTGGGCAGCCAGTGTGTCACGCGGAGTGAGTGTGGCTGCAACTTTGAGGGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS TCA 72 bp CACGGTCACGTCCACCTGCTTAACCCACAAGGCCAGTaGCGGGTCCCGGTCCTCATTCTTGGCTGTGACAAC +
Preference number: 6 (lower is better)
Translates to: HGHVHLLNPQGQ*RVPVLILGCDN
Trigger: GTTGTCACAGCCAAGAATGAGGACCGGGACCCGTCACTGGCCTTGTGGGTTAAGCAGGTGGACGTGACCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS GCA 72 bp GAATCACGTTGCGACGGAAACAGCGGCAGCGCCGCGTaGAGTCGCTGTTCCAAAATAGCTGCTTGGGCTCGT +
Preference number: 6 (lower is better)
Translates to: ESRCDGNSGSAA*SRCSKIAAWAR
Trigger: ACGAGCCCAAGCAGCTATTTTGGAACAGCGACTGCACGCGGCGCTGCCGCTGTTTCCGTCGCAACGTGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS GCA 72 bp TCTTGCCGTCCTCCTGCAGGGTTCCTGTTACACAGCTaGAGAGAGGCCCATCCACCCGGCTCGTGCAAATCT +
Preference number: 6 (lower is better)
Translates to: SCRPPAGFLLHS*REAHPPGSCKS
Trigger: AGATTTGCACGAGCCGGGTGGATGGGCCTCTCTGCAGCTGTGTAACAGGAACCCTGCAGGAGGACGGCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS GCA 72 bp CTGGTGGTAAAGAACCTCCCGTGTCTCCCAGCTGCCTaGCCCAGGGTAGAAGAGTGTCTACCTCTGCAGCTC +
Preference number: 6 (lower is better)
Translates to: LVVKNLPCLPAA*PRVEECLPLQL
Trigger: GAGCTGCAGAGGTAGACACTCTTCTACCCTGGGGCAGGCAGCTGGGAGACACGGGAGGTTCTTTACCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645008.1
CDS CCA 72 bp GCCCAGCGGCCTGGAACATTGACGTTTGTGGTCTCCTaGATATTCACGATCTCGGGGGTTCTTGACCCCGGG +
Preference number: 6 (lower is better)
Translates to: AQRPGTLTFVVS*IFTISGVLDPG
Trigger: CCCGGGGTCAAGAACCCCCGAGATCGTGAATATCCAGGAGACCACAAACGTCAATGTTCCAGGCCGCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp TGCACAGGTCATACACGCAGCTGTGCACAAAAGCAGTaGGGTCCACGACAGTGCCACACTCCCACAGAGGGC +
Preference number: 6 (lower is better)
Translates to: CTGHTRSCAQKQ*GPRQCHTPTEG
Trigger: GCCCTCTGTGGGAGTGTGGCACTGTCGTGGACCCCACTGCTTTTGTGCACAGCTGCGTGTATGACCTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp TGCCAAGGGCTTGGCACACAAGAGCATAGGCCTGGATaGCTTGGCAGAGGAGCGTGCCATTGTCCCTCACAC +
Preference number: 6 (lower is better)
Translates to: CQGLGTQEHRPG*LGRGACHCPSH
Trigger: GTGTGAGGGACAATGGCACGCTCCTCTGCCAAGCCATCCAGGCCTATGCTCTTGTGTGCCAAGCCCTTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp GCTGTAGCAGCCGTCCAGGTAGCAGGACTCGTAGAATaGGAGGGGATCGAGAAGCCCATAGCAGGGCTGGAA +
Preference number: 6 (lower is better)
Translates to: AVAAVQVAGLVE*EGIEKPIAGLE
Trigger: TTCCAGCCCTGCTATGGGCTTCTCGATCCCCTCCCATTCTACGAGTCCTGCTACCTGGACGGCTGCTACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CAA 90 bp ACACCCAGTCTGGGTTCGCCAGTCTCCAATTGGAATGCCAAGGGCTaGGCACACAAGAGCATAGGCCTGGATGGCTTGGCAGAGGAGCGT +
Preference number: 6 (lower is better)
Translates to: TPSLGSPVSNWNAKG*AHKSIGLDGLAEER
Trigger: ACGCTCCTCTGCCAAGCCATCCAGGCCTATGCTCTTGTGTGCCAAGCCCTTGGCATTCCAATTGGAGACTGGCGAACCCAGACTGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CAA 90 bp ATCCGAAGTCCCCGCAGCCAAGCAGGTCCTGCATCGGGCTTCTTCTaGTTGATGTCGATTTCCAAGTACTCTGGGCGCTCAGGGCAGGTC +
Preference number: 6 (lower is better)
Translates to: IRSPRSQAGPASGFF*LMSISKYSGRSGQV
Trigger: GACCTGCCCTGAGCGCCCAGAGTACTTGGAAATCGACATCAACAAGAAGAAGCCCGATGCAGGACCTGCTTGGCTGCGGGGACTTCGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CAA 90 bp TCCACCCAGAAGGTCTCATTGGTGGCAAGTTGGTGCCCCTCAAAGTaGCAGCCACACTCACTCCGCGTGACACACTGGCTGCCCAGTAGA +
Preference number: 6 (lower is better)
Translates to: STQKVSLVASWCPSK*QPHSLRVTHWLPSR
Trigger: TCTACTGGGCAGCCAGTGTGTCACGCGGAGTGAGTGTGGCTGCAACTTTGAGGGGCACCAACTTGCCACCAATGAGACCTTCTGGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS CAA 90 bp GATCTGGCAGTCCAGGTCCACCCAGAAGGTCTCATTGGTGGCAAGTaGGTGCCCCTCAAAGTTGCAGCCACACTCACTCCGCGTGACACA +
Preference number: 6 (lower is better)
Translates to: DLAVQVHPEGLIGGK*VPLKVAATLTPRDT
Trigger: TGTGTCACGCGGAGTGAGTGTGGCTGCAACTTTGAGGGGCACCAACTTGCCACCAATGAGACCTTCTGGGTGGACCTGGACTGCCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS TCA 72 bp CAGTGCCACACTCCCACAGAGGGCCGTCTGTCTTGTTaGGGAAGCCGCAGTAGTCAGAGCCAAAGTAGAGGG +
Preference number: 6 (lower is better)
Translates to: QCHTPTEGRLSC*GSRSSQSQSRG
Trigger: CCCTCTACTTTGGCTCTGACTACTGCGGCTTCCTCAACAAGACAGACGGCCCTCTGTGGGAGTGTGGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 72 bp AGCTTTCCAGGAACACTGCCAGGTTGTCCGTGCACTTaGCGTTGGGGAGACAGAACTCGTCACTGGCGTTGG +
Preference number: 6 (lower is better)
Translates to: SFPGTLPGCPCT*RWGDRTRHWRW
Trigger: CCAACGCCAGTGACGAGTTCTGTCTCCCCAACGGCAAGTGCACGGACAACCTGGCAGTGTTCCTGGAAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 72 bp AGGTCCACCCAGAAGGTCTCATTGGTGGCAAGTTGGTaGCCCTCAAAGTTGCAGCCACACTCACTCCGCGTG +
Preference number: 6 (lower is better)
Translates to: RSTQKVSLVASW*PSKLQPHSLRV
Trigger: CACGCGGAGTGAGTGTGGCTGCAACTTTGAGGGGCACCAACTTGCCACCAATGAGACCTTCTGGGTGGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS GCA 72 bp GCAGACCCATGGGCATCTCCAGGTCATCATCAGGGTTaGCGTTGTAGCGGCCACACAGACCATAGGTGCTGT +
Preference number: 6 (lower is better)
Translates to: ADPWASPGHHQG*RCSGHTDHRCC
Trigger: ACAGCACCTATGGTCTGTGTGGCCGCTACAACGGCAACCCTGATGATGACCTGGAGATGCCCATGGGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000478058.1
ENST00000642222.1
ENST00000645008.1
CDS GCA 72 bp GCCAGCTGCAGGCGGTCTGCACCGCGCCCCCATCGATaGAAGAGTCAAACAGGCAGTTCTTATAGAAGAAGG +
Preference number: 6 (lower is better)
Translates to: ASCRRSAPRPHR*KSQTGSSYRRR
Trigger: CCTTCTTCTATAAGAACTGCCTGTTTGACTCTTGCATCGATGGGGGCGCGGTGCAGACCGCCTGCAGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000478058.1
ENST00000642222.1
ENST00000645008.1
CDS GCA 72 bp TTACACAGCTGCAGAGAGGCCCATCCACCCGGCTCGTaGAAATCTGCTCACACCCTCCATTGTCCTCACACC +
Preference number: 6 (lower is better)
Translates to: LHSCREAHPPGS*KSAHTLHCPHT
Trigger: GGTGTGAGGACAATGGAGGGTGTGAGCAGATTTGCACGAGCCGGGTGGATGGGCCTCTCTGCAGCTGTGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS GCA 72 bp GAAGAGTGTCTACCTCTGCAGCTCTTGCCGTCCTCCTaGAGGGTTCCTGTTACACAGCTGCAGAGAGGCCCA +
Preference number: 6 (lower is better)
Translates to: EECLPLQLLPSS*RVPVTQLQRGP
Trigger: TGGGCCTCTCTGCAGCTGTGTAACAGGAACCCTGCAGGAGGACGGCAAGAGCTGCAGAGGTAGACACTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645008.1
CDS GCA 72 bp CCTTCTGGTGGTAAAGAACCTCCCGTGTCTCCCAGCTaGCTGCCCCAGGGTAGAAGAGTGTCTACCTCTGCA +
Preference number: 6 (lower is better)
Translates to: PSGGKEPPVSPS*LPQGRRVSTSA
Trigger: TGCAGAGGTAGACACTCTTCTACCCTGGGGCAGGCAGCTGGGAGACACGGGAGGTTCTTTACCACCAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645008.1
CDS CCA 72 bp CCAGGAACACTGCCAGGTTGTCCGTGCACTTGCCGTTaGGGAGACAGAACTCGTCACTGGCGTTGGCATTGT +
Preference number: 6 (lower is better)
Translates to: PGTLPGCPCTCR*GDRTRHWRWHC
Trigger: ACAATGCCAACGCCAGTGACGAGTTCTGTCTCCCCAACGGCAAGTGCACGGACAACCTGGCAGTGTTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp AGAGGTCTCTTCTGCATGCCATTGGTTTTCCAGCTCTaGGCCAGCACCACGCTGCTTACCACCGGCTTCCCT +
Preference number: 6 (lower is better)
Translates to: RGLFCMPLVFQL*ASTTLLTTGFP
Trigger: AGGGAAGCCGGTGGTAAGCAGCGTGGTGCTGGCCCAGAGCTGGAAAACCAATGGCATGCAGAAGAGACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264037.2
ENST00000392793.6
CDS CCA 72 bp TGCAGCTGGGGGCAAGAGGTCTCTTCTGCATGCCATTaGTTTTCCAGCTCTGGGCCAGCACCACGCTGCTTA +
Preference number: 6 (lower is better)
Translates to: CSWGQEVSSACH*FSSSGPAPRCL
Trigger: TAAGCAGCGTGGTGCTGGCCCAGAGCTGGAAAACCAATGGCATGCAGAAGAGACCTCTTGCCCCCAGCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264037.2
ENST00000392793.6
CDS CCA 72 bp TTGCAGCTCTTCTGCATGCCATTGGTTTTCCAGCTCTaGGCCAGCACCACGCTGCTTACCACCGGCTTCCCT +
Preference number: 6 (lower is better)
Translates to: LQLFCMPLVFQL*ASTTLLTTGFP
Trigger: AGGGAAGCCGGTGGTAAGCAGCGTGGTGCTGGCCCAGAGCTGGAAAACCAATGGCATGCAGAAGAGCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CAA 72 bp TTCAACTTGACTTCCGAAGCCCCGATGCCTCCTATCTaGACCTCCTGGTCGGCCACCAGGATCCGAAGTCCC +
Preference number: 6 (lower is better)
Translates to: FNLTSEAPMPPI*TSWSATRIRSP
Trigger: GGGACTTCGGATCCTGGTGGCCGACCAGGAGGTCAAGATAGGAGGCATCGGGGCTTCGGAAGTCAAGTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CAA 72 bp TCCAGGAACACTGCCAGGTTGTCCGTGCACTTGCCGTaGGGGAGACAGAACTCGTCACTGGCGTTGGCATTG +
Preference number: 6 (lower is better)
Translates to: SRNTARLSVHLP*GRQNSSLALAL
Trigger: CAATGCCAACGCCAGTGACGAGTTCTGTCTCCCCAACGGCAAGTGCACGGACAACCTGGCAGTGTTCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CAA 72 bp CAGCTTTCCAGGAACACTGCCAGGTTGTCCGTGCACTaGCCGTTGGGGAGACAGAACTCGTCACTGGCGTTG +
Preference number: 6 (lower is better)
Translates to: QLSRNTARLSVH*PLGRQNSSLAL
Trigger: CAACGCCAGTGACGAGTTCTGTCTCCCCAACGGCAAGTGCACGGACAACCTGGCAGTGTTCCTGGAAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CAA 72 bp GTCCAGGTCCACCCAGAAGGTCTCATTGGTGGCAAGTaGGTGCCCCTCAAAGTTGCAGCCACACTCACTCCG +
Preference number: 6 (lower is better)
Translates to: VQVHPEGLIGGK*VPLKVAATLTP
Trigger: CGGAGTGAGTGTGGCTGCAACTTTGAGGGGCACCAACTTGCCACCAATGAGACCTTCTGGGTGGACCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS CAA 72 bp TTGCAGCTGGGGGCAAGAGGTCTCTTCTGCATGCCATaGGTTTTCCAGCTCTGGGCCAGCACCACGCTGCTT +
Preference number: 6 (lower is better)
Translates to: LQLGARGLFCMP*VFQLWASTTLL
Trigger: AAGCAGCGTGGTGCTGGCCCAGAGCTGGAAAACCAATGGCATGCAGAAGAGACCTCTTGCCCCCAGCTGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264037.2
ENST00000392793.6
CDS CAA 72 bp TGCCCCAGGGTAGAAGAGTGTCTACCTCTGCAGCTCTaGCCGTCCTCCTGCAGGGTTCCTGTTACACAGCTG +
Preference number: 6 (lower is better)
Translates to: CPRVEECLPLQL*PSSCRVPVTQL
Trigger: CAGCTGTGTAACAGGAACCCTGCAGGAGGACGGCAAGAGCTGCAGAGGTAGACACTCTTCTACCCTGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645008.1
CDS CAA 90 bp ACTGCACTGTGGACACACACCCAGTCTGGGTTCGCCAGTCTCCAATaGGAATGCCAAGGGCTTGGCACACAAGAGCATAGGCCTGGATGG +
Preference number: 6 (lower is better)
Translates to: TALWTHTQSGFASLQ*ECQGLGTQEHRPGW
Trigger: CCATCCAGGCCTATGCTCTTGTGTGCCAAGCCCTTGGCATTCCAATTGGAGACTGGCGAACCCAGACTGGGTGTGTGTCCACAGTGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CAA 90 bp CAGATCTCCTCGAAAGTTGTCCAGCTTTCCAGGAACACTGCCAGGTaGTCCGTGCACTTGCCGTTGGGGAGACAGAACTCGTCACTGGCG +
Preference number: 6 (lower is better)
Translates to: QISSKVVQLSRNTAR*SVHLPLGRQNSSLA
Trigger: CGCCAGTGACGAGTTCTGTCTCCCCAACGGCAAGTGCACGGACAACCTGGCAGTGTTCCTGGAAAGCTGGACAACTTTCGAGGAGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS TCA 72 bp GCAGCCAAGCAGGTCCTGCATCGGGCTTCTTCTTGTTaGTGTCGATTTCCAAGTACTCTGGGCGCTCAGGGC +
Preference number: 6 (lower is better)
Translates to: AAKQVLHRASSC*CRFPSTLGAQG
Trigger: GCCCTGAGCGCCCAGAGTACTTGGAAATCGACATCAACAAGAAGAAGCCCGATGCAGGACCTGCTTGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS TCA 72 bp AGGCCAGTGACGGGTCCCGGTCCTCATTCTTGGCTGTaGCAACAAACTTGGGGAAAGAGTCTGAGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: RPVTGPGPHSWL*QQTWGKSLSLA
Trigger: GGCCAAGCTCAGACTCTTTCCCCAAGTTTGTTGTCACAGCCAAGAATGAGGACCGGGACCCGTCACTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS TCA 72 bp GCCCATAGCAGGGCTGGAAGAAGCCCTTCATGTCGGTaGGCTTCAGGCAGTAGCCATCACCCTGCATCTTCT +
Preference number: 6 (lower is better)
Translates to: AHSRAGRSPSCR*ASGSSHHPASS
Trigger: AGAAGATGCAGGGTGATGGCTACTGCCTGAAGCTCACCGACATGAAGGGCTTCTTCCAGCCCTGCTATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS GCA 72 bp TGGCTTGGCAGAGGAGCGTGCCATTGTCCCTCACACTaGACAGGTCATACACGCAGCTGTGCACAAAAGCAG +
Preference number: 6 (lower is better)
Translates to: WLGRGACHCPSH*TGHTRSCAQKQ
Trigger: CTGCTTTTGTGCACAGCTGCGTGTATGACCTGTGCAGTGTGAGGGACAATGGCACGCTCCTCTGCCAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 72 bp TTGTCCAGCTTTCCAGGAACACTGCCAGGTTGTCCGTaGACTTGCCGTTGGGGAGACAGAACTCGTCACTGG +
Preference number: 6 (lower is better)
Translates to: LSSFPGTLPGCP*TCRWGDRTRHW
Trigger: CCAGTGACGAGTTCTGTCTCCCCAACGGCAAGTGCACGGACAACCTGGCAGTGTTCCTGGAAAGCTGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 72 bp TGCGGGCTTGGCAGTAGTACAGGCCACCTTCCTCCATaGAGTACTCATCATCCTTGCAGGGAATGGTCTCGC +
Preference number: 6 (lower is better)
Translates to: CGLGSSTGHLPP*STHHPCREWSR
Trigger: GCGAGACCATTCCCTGCAAGGATGATGAGTACTGCATGGAGGAAGGTGGCCTGTACTACTGCCAAGCCCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS GCA 72 bp GAAGAATTAGAGGCTCTGCAGCTCTTGCCGTCCTCCTaGAGGGTTCCTGTTACACAGCTGCAGAGAGGCCCA +
Preference number: 6 (lower is better)
Translates to: EELEALQLLPSS*RVPVTQLQRGP
Trigger: TGGGCCTCTCTGCAGCTGTGTAACAGGAACCCTGCAGGAGGACGGCAAGAGCTGCAGAGCCTCTAATTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000646278.1
CDS CCA 72 bp GGACACACACCCAGTCTGGGTTCGCCAGTCTCCAATTaGAATGCCAAGGGCTTGGCACACAAGAGCATAGGC +
Preference number: 6 (lower is better)
Translates to: GHTPSLGSPVSN*NAKGLAHKSIG
Trigger: GCCTATGCTCTTGTGTGCCAAGCCCTTGGCATTCCAATTGGAGACTGGCGAACCCAGACTGGGTGTGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp TCTGGCAGTCCAGGTCCACCCAGAAGGTCTCATTGGTaGCAAGTTGGTGCCCCTCAAAGTTGCAGCCACACT +
Preference number: 6 (lower is better)
Translates to: SGSPGPPRRSHW*QVGAPQSCSHT
Trigger: AGTGTGGCTGCAACTTTGAGGGGCACCAACTTGCCACCAATGAGACCTTCTGGGTGGACCTGGACTGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS CAA 72 bp CTGGGTTCGCCAGTCTCCAATTGGAATGCCAAGGGCTaGGCACACAAGAGCATAGGCCTGGATGGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: LGSPVSNWNAKG*AHKSIGLDGLA
Trigger: TGCCAAGCCATCCAGGCCTATGCTCTTGTGTGCCAAGCCCTTGGCATTCCAATTGGAGACTGGCGAACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CAA 72 bp CCCCGCAGCCAAGCAGGTCCTGCATCGGGCTTCTTCTaGTTGATGTCGATTTCCAAGTACTCTGGGCGCTCA +
Preference number: 6 (lower is better)
Translates to: PRSQAGPASGFF*LMSISKYSGRS
Trigger: TGAGCGCCCAGAGTACTTGGAAATCGACATCAACAAGAAGAAGCCCGATGCAGGACCTGCTTGGCTGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CAA 72 bp AAGGTCTCATTGGTGGCAAGTTGGTGCCCCTCAAAGTaGCAGCCACACTCACTCCGCGTGACACACTGGCTG +
Preference number: 6 (lower is better)
Translates to: KVSLVASWCPSK*QPHSLRVTHWL
Trigger: CAGCCAGTGTGTCACGCGGAGTGAGTGTGGCTGCAACTTTGAGGGGCACCAACTTGCCACCAATGAGACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS CAA 72 bp TTCTGGTTGGGGATCAGGCTGCACAGCTGCTGCACTTaGGAGAAACCTTCCACCTTGGCACAGGACGGACAG +
Preference number: 6 (lower is better)
Translates to: FWLGIRLHSCCT*EKPSTLAQDGQ
Trigger: CTGTCCGTCCTGTGCCAAGGTGGAAGGTTTCTCCAAAGTGCAGCAGCTGTGCAGCCTGATCCCCAACCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000478058.1
ENST00000642222.1
ENST00000645008.1
CDS CAA 72 bp AAATCTTCCCCCTCGATGCCGGTGCACTGTCTGTCATaGATCCTCACGCCCTCCCTCTCAAAACCGAGCTGG +
Preference number: 6 (lower is better)
Translates to: KSSPSMPVHCLS*ILTPSLSKPSW
Trigger: CCAGCTCGGTTTTGAGAGGGAGGGCGTGAGGATCAATGACAGACAGTGCACCGGCATCGAGGGGGAAGATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CAA 90 bp ACCTGCTTAACCCACAAGGCCAGTGACGGGTCCCGGTCCTCATTCTaGGCTGTGACAACAAACTTGGGGAAAGAGTCTGAGCTTGGCCTG +
Preference number: 6 (lower is better)
Translates to: TCLTHKASDGSRSSF*AVTTNLGKESELGL
Trigger: CAGGCCAAGCTCAGACTCTTTCCCCAAGTTTGTTGTCACAGCCAAGAATGAGGACCGGGACCCGTCACTGGCCTTGTGGGTTAAGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS CAA 90 bp ACCTGGCAGAAGGTGTCCCTCTTCACCCAGCTCTGCCCAAACTCATaGACACTCGATGCAAGCAGACCCATGGGCATCTCCAGGTCATCA +
Preference number: 6 (lower is better)
Translates to: TWQKVSLFTQLCPNS*TLDASRPMGISRSS
Trigger: TGATGACCTGGAGATGCCCATGGGTCTGCTTGCATCGAGTGTCAATGAGTTTGGGCAGAGCTGGGTGAAGAGGGACACCTTCTGCCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000478058.1
ENST00000642222.1
ENST00000645008.1
CDS CAA 90 bp AGAGGCCCATCCACCCGGCTCGTGCAAATCTGCTCACACCCTCCATaGTCCTCACACCAGTCCAGCCTTTTTCTCCTAATAGGTCCCACT +
Preference number: 6 (lower is better)
Translates to: RGPSTRLVQICSHPP*SSHQSSLFLLIGPT
Trigger: AGTGGGACCTATTAGGAGAAAAAGGCTGGACTGGTGTGAGGACAATGGAGGGTGTGAGCAGATTTGCACGAGCCGGGTGGATGGGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS TCA 72 bp CTGGATGTGCACATTGTCACACATGGCTGCATACTGTaGGAACTGCAGCTCGTTGCAGCTGGGGGCAAGAGG +
Preference number: 6 (lower is better)
Translates to: LDVHIVTHGCIL*ELQLVAAGGKR
Trigger: CCTCTTGCCCCCAGCTGCAACGAGCTGCAGTTCTCACAGTATGCAGCCATGTGTGACAATGTGCACATCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264037.2
ENST00000392793.6
CDS GCA 72 bp ATGTGCTGGTCTCCACAGCGCTGCAGTAGAAGAATTTaGCTTTGGGTTCGCACACCTCGTAGGGGCTACAGG +
Preference number: 6 (lower is better)
Translates to: MCWSPQRCSRRI*LWVRTPRRGYR
Trigger: CCTGTAGCCCCTACGAGGTGTGCGAACCCAAAGGCAAATTCTTCTACTGCAGCGCTGTGGAGACCAGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 72 bp CCCCAAACACCACGCATGTGCTGGTCTCCACAGCGCTaGAGTAGAAGAATTTGCCTTTGGGTTCGCACACCT +
Preference number: 6 (lower is better)
Translates to: PQTPRMCWSPQR*SRRICLWVRTP
Trigger: AGGTGTGCGAACCCAAAGGCAAATTCTTCTACTGCAGCGCTGTGGAGACCAGCACATGCGTGGTGTTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 72 bp CACCAGGATCCGAAGTCCCCGCAGCCAAGCAGGTCCTaGATCGGGCTTCTTCTTGTTGATGTCGATTTCCAA +
Preference number: 6 (lower is better)
Translates to: HQDPKSPQPSRS*IGLLLVDVDFQ
Trigger: TTGGAAATCGACATCAACAAGAAGAAGCCCGATGCAGGACCTGCTTGGCTGCGGGGACTTCGGATCCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 72 bp GATCTCCTCGAAAGTTGTCCAGCTTTCCAGGAACACTaGCAGGTTGTCCGTGCACTTGCCGTTGGGGAGACA +
Preference number: 6 (lower is better)
Translates to: DLLESCPAFQEH*QVVRALAVGET
Trigger: TGTCTCCCCAACGGCAAGTGCACGGACAACCTGGCAGTGTTCCTGGAAAGCTGGACAACTTTCGAGGAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 72 bp TGCAGGGAATGGTCTCGCAGTGGACCCTGTTGTCTGTaGCACTGCAATAGCAGAAGATCTGGCAGTCCAGGT +
Preference number: 6 (lower is better)
Translates to: CREWSRSGPCCL*HCNSRRSGSPG
Trigger: ACCTGGACTGCCAGATCTTCTGCTATTGCAGTGGCACAGACAACAGGGTCCACTGCGAGACCATTCCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS GCA 72 bp ACAGGCCACCTTCCTCCATGCAGTACTCATCATCCTTaGAGGGAATGGTCTCGCAGTGGACCCTGTTGTCTG +
Preference number: 6 (lower is better)
Translates to: TGHLPPCSTHHP*REWSRSGPCCL
Trigger: CAGACAACAGGGTCCACTGCGAGACCATTCCCTGCAAGGATGATGAGTACTGCATGGAGGAAGGTGGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS CCA 72 bp CTCGCCTCGAATTCCATTGTGCACATCTGCCCAAAATaGGGCGACGAAGGCTCTCCCATCTGTCAGGGGAAA +
Preference number: 6 (lower is better)
Translates to: LASNSIVHICPK*GDEGSPICQGK
Trigger: TTTCCCCTGACAGATGGGAGAGCCTTCGTCGCCCCATTTTGGGCAGATGTGCACAATGGAATTCGAGGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp TGGTCTCCACAGCGCTGCAGTAGAAGAATTTGCCTTTaGGTTCGCACACCTCGTAGGGGCTACAGGAAGCCT +
Preference number: 6 (lower is better)
Translates to: WSPQRCSRRICL*VRTPRRGYRKP
Trigger: AGGCTTCCTGTAGCCCCTACGAGGTGTGCGAACCCAAAGGCAAATTCTTCTACTGCAGCGCTGTGGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp GGCCGGCCTGCCATCCGGGCGGAGGAAGTCATCCAGTaGGTTTTTATTATAGTTTCCACAGAGTCCACAGGT +
Preference number: 6 (lower is better)
Translates to: GRPAIRAEEVIQ*VFIIVSTESTG
Trigger: ACCTGTGGACTCTGTGGAAACTATAATAAAAACCCACTGGATGACTTCCTCCGCCCGGATGGCAGGCCGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp CTGGCAGACACTCACGCAGCTCTCGTAATGGCTGTTTaGAGGGCAGGTGACAGTGCAGGACGTGTAATTCCT +
Preference number: 6 (lower is better)
Translates to: LADTHAALVMAV*RAGDSAGRVIP
Trigger: AGGAATTACACGTCCTGCACTGTCACCTGCCCTCCAAACAGCCATTACGAGAGCTGCGTGAGTGTCTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CCA 72 bp AGAACTGCAGCTCGTTGCAGCTCTTCTGCATGCCATTaGTTTTCCAGCTCTGGGCCAGCACCACGCTGCTTA +
Preference number: 6 (lower is better)
Translates to: RTAARCSSSACH*FSSSGPAPRCL
Trigger: TAAGCAGCGTGGTGCTGGCCCAGAGCTGGAAAACCAATGGCATGCAGAAGAGCTGCAACGAGCTGCAGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CAA 72 bp TCGAAAGTTGTCCAGCTTTCCAGGAACACTGCCAGGTaGTCCGTGCACTTGCCGTTGGGGAGACAGAACTCG +
Preference number: 6 (lower is better)
Translates to: SKVVQLSRNTAR*SVHLPLGRQNS
Trigger: CGAGTTCTGTCTCCCCAACGGCAAGTGCACGGACAACCTGGCAGTGTTCCTGGAAAGCTGGACAACTTTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CAA 72 bp AAGATCTGGCAGTCCAGGTCCACCCAGAAGGTCTCATaGGTGGCAAGTTGGTGCCCCTCAAAGTTGCAGCCA +
Preference number: 6 (lower is better)
Translates to: KIWQSRSTQKVS*VASWCPSKLQP
Trigger: TGGCTGCAACTTTGAGGGGCACCAACTTGCCACCAATGAGACCTTCTGGGTGGACCTGGACTGCCAGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS CAA 72 bp ACCCACAAGGCCAGTGACGGGTCCCGGTCCTCATTCTaGGCTGTGACAACAAACTTGGGGAAAGAGTCTGAG +
Preference number: 6 (lower is better)
Translates to: THKASDGSRSSF*AVTTNLGKESE
Trigger: CTCAGACTCTTTCCCCAAGTTTGTTGTCACAGCCAAGAATGAGGACCGGGACCCGTCACTGGCCTTGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS CAA 72 bp TCACACATGGCTGCATACTGTGAGAACTGCAGCTCGTaGCAGCTGGGGGCAAGAGGTCTCTTCTGCATGCCA +
Preference number: 6 (lower is better)
Translates to: SHMAAYCENCSS*QLGARGLFCMP
Trigger: TGGCATGCAGAAGAGACCTCTTGCCCCCAGCTGCAACGAGCTGCAGTTCTCACAGTATGCAGCCATGTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264037.2
ENST00000392793.6
CDS CAA 90 bp TCCGAGTCATTGTTGCAGGCCTTCAGCAGGTCCCCACACTCTCCATaGCAGATCTCCTCGAAAGTTGTCCAGCTTTCCAGGAACACTGCC +
Preference number: 6 (lower is better)
Translates to: SESLLQAFSRSPHSP*QISSKVVQLSRNTA
Trigger: GGCAGTGTTCCTGGAAAGCTGGACAACTTTCGAGGAGATCTGCAATGGAGAGTGTGGGGACCTGCTGAAGGCCTGCAACAATGACTCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CAA 90 bp ACGGGCGAAATGATGGTGAGGTTGGGGGCCGACCACTTGTCGAAGTaGATGATAAGCTGGAAGGAGATGTCGGGCAGTTTCTGGCAGATG +
Preference number: 6 (lower is better)
Translates to: TGEMMVRLGADHLSK*MISWKEMSGSFWQM
Trigger: CATCTGCCAGAAACTGCCCGACATCTCCTTCCAGCTTATCATCAACTTCGACAAGTGGTCGGCCCCCAACCTCACCATCATTTCGCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS TCA 72 bp TGTGGTCTCCTGGATATTCACGATCTCGGGGGTTCTTaGCCCCGGGAGGCTGAAGAAATTGGTGAGGTTTCC +
Preference number: 6 (lower is better)
Translates to: CGLLDIHDLGGS*PREAEEIGEVS
Trigger: GGAAACCTCACCAATTTCTTCAGCCTCCCGGGGTCAAGAACCCCCGAGATCGTGAATATCCAGGAGACCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 72 bp AAGTGTGGTAGTGTGGCTCCCCAAACACCACGCATGTaGTGGTCTCCACAGCGCTGCAGTAGAAGAATTTGC +
Preference number: 6 (lower is better)
Translates to: KCGSVAPQTPRM*WSPQRCSRRIC
Trigger: GCAAATTCTTCTACTGCAGCGCTGTGGAGACCAGCACATGCGTGGTGTTTGGGGAGCCACACTACCACACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 72 bp TGTTGCAGGCCTTCAGCAGGTCCCCACACTCTCCATTaGAGATCTCCTCGAAAGTTGTCCAGCTTTCCAGGA +
Preference number: 6 (lower is better)
Translates to: CCRPSAGPHTLH*RSPRKLSSFPG
Trigger: TCCTGGAAAGCTGGACAACTTTCGAGGAGATCTGCAATGGAGAGTGTGGGGACCTGCTGAAGGCCTGCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS GCA 72 bp TGCACATTGTCACACATGGCTGCATACTGTGAGAACTaGAGCTCGTTGCAGCTGGGGGCAAGAGGTCTCTTC +
Preference number: 6 (lower is better)
Translates to: CTLSHMAAYCEN*SSLQLGARGLF
Trigger: GAAGAGACCTCTTGCCCCCAGCTGCAACGAGCTGCAGTTCTCACAGTATGCAGCCATGTGTGACAATGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264037.2
ENST00000392793.6
CDS CCA 72 bp TGTGGTAGTGTGGCTCCCCAAACACCACGCATGTGCTaGTCTCCACAGCGCTGCAGTAGAAGAATTTGCCTT +
Preference number: 6 (lower is better)
Translates to: CGSVAPQTPRMC*SPQRCSRRICL
Trigger: AAGGCAAATTCTTCTACTGCAGCGCTGTGGAGACCAGCACATGCGTGGTGTTTGGGGAGCCACACTACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp TGTACATGTGATGCACTCCTCAAAGTGGCTGTTCTCTaGGCACTCCAGTGGGCAGAAGTCATAGGTCCGCCA +
Preference number: 6 (lower is better)
Translates to: CTCDALLKVAVL*ALQWAEVIGPP
Trigger: TGGCGGACCTATGACTTCTGCCCACTGGAGTGCCCAGAGAACAGCCACTTTGAGGAGTGCATCACATGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS CCA 72 bp TTGATGATAAGCTGGAAGGAGATGTCGGGCAGTTTCTaGCAGATGGTGGACAGCACGAAGGCGCAGTTGGCT +
Preference number: 6 (lower is better)
Translates to: LMISWKEMSGSF*QMVDSTKAQLA
Trigger: AGCCAACTGCGCCTTCGTGCTGTCCACCATCTGCCAGAAACTGCCCGACATCTCCTTCCAGCTTATCATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CCA 72 bp TTGGGGGCCGACCACTTGTCGAAGTTGATGATAAGCTaGAAGGAGATGTCGGGCAGTTTCTGGCAGATGGTG +
Preference number: 6 (lower is better)
Translates to: LGADHLSKLMIS*KEMSGSFWQMV
Trigger: CACCATCTGCCAGAAACTGCCCGACATCTCCTTCCAGCTTATCATCAACTTCGACAAGTGGTCGGCCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CCA 72 bp TGGCTGCATACTGTGAGAACTGCAGCTCGTTGCAGCTaGGGGCAAGAGGTCTCTTCTGCATGCCATTGGTTT +
Preference number: 6 (lower is better)
Translates to: WLHTVRTAARCS*GQEVSSACHWF
Trigger: AAACCAATGGCATGCAGAAGAGACCTCTTGCCCCCAGCTGCAACGAGCTGCAGTTCTCACAGTATGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264037.2
ENST00000392793.6
CDS CAA 72 bp TTGTTGCAGGCCTTCAGCAGGTCCCCACACTCTCCATaGCAGATCTCCTCGAAAGTTGTCCAGCTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: LLQAFSRSPHSP*QISSKVVQLSR
Trigger: CCTGGAAAGCTGGACAACTTTCGAGGAGATCTGCAATGGAGAGTGTGGGGACCTGCTGAAGGCCTGCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CAA 72 bp TACAGGCCACCTTCCTCCATGCAGTACTCATCATCCTaGCAGGGAATGGTCTCGCAGTGGACCCTGTTGTCT +
Preference number: 6 (lower is better)
Translates to: YRPPSSMQYSSS*QGMVSQWTLLS
Trigger: AGACAACAGGGTCCACTGCGAGACCATTCCCTGCAAGGATGATGAGTACTGCATGGAGGAAGGTGGCCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
CDS CAA 72 bp ACGGGCGAAATGATGGTGAGGTTGGGGGCCGACCACTaGTCGAAGTTGATGATAAGCTGGAAGGAGATGTCG +
Preference number: 6 (lower is better)
Translates to: TGEMMVRLGADH*SKLMISWKEMS
Trigger: CGACATCTCCTTCCAGCTTATCATCAACTTCGACAAGTGGTCGGCCCCCAACCTCACCATCATTTCGCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS TCA 72 bp CTGGATGTGCACATTGTCACACATGGCTGCATACTGTaGGAACTGCAGCTCGTTGCAGCTCTTCTGCATGCC +
Preference number: 6 (lower is better)
Translates to: LDVHIVTHGCIL*ELQLVAALLHA
Trigger: GGCATGCAGAAGAGCTGCAACGAGCTGCAGTTCTCACAGTATGCAGCCATGTGTGACAATGTGCACATCCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CCA 72 bp TCCACAGAGTCCACAGGTGGAGTTTATATAGGAGCCTaGGACGGAAATGGAGGCGTAGTGCTGGCCATCAAA +
Preference number: 6 (lower is better)
Translates to: STESTGGVYIGA*DGNGGVVLAIK
Trigger: TTTGATGGCCAGCACTACGCCTCCATTTCCGTCCCAGGCTCCTATATAAACTCCACCTGTGGACTCTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp GACAGCCGGATGTACAATAGACCTATGTCTGAGTACTaGACAGTCACCACGCCCTTGGACTCCACTGTCGTA +
Preference number: 6 (lower is better)
Translates to: DSRMYNRPMSEY*TVTTPLDSTVV
Trigger: TACGACAGTGGAGTCCAAGGGCGTGGTGACTGTCCAGTACTCAGACATAGGTCTATTGTACATCCGGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp CACCCTGCATCTTCTGGATGTGCACATTGTCACACATaGCTGCATACTGTGAGAACTGCAGCTCGTTGCAGC +
Preference number: 6 (lower is better)
Translates to: HPASSGCAHCHT*LHTVRTAARCS
Trigger: GCTGCAACGAGCTGCAGTTCTCACAGTATGCAGCCATGTGTGACAATGTGCACATCCAGAAGATGCAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CAA 72 bp ATGATGGTGAGGTTGGGGGCCGACCACTTGTCGAAGTaGATGATAAGCTGGAAGGAGATGTCGGGCAGTTTC +
Preference number: 6 (lower is better)
Translates to: MMVRLGADHLSK*MISWKEMSGSF
Trigger: GAAACTGCCCGACATCTCCTTCCAGCTTATCATCAACTTCGACAAGTGGTCGGCCCCCAACCTCACCATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CAA 72 bp CTCACGCCCTCCCTCTCAAAACCGAGCTGGAAGAGCTaGCACTTAGATATGGACACTTCCATTTGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: LTPSLSKPSWKS*HLDMDTSIWAA
Trigger: AGCAGCCCAAATGGAAGTGTCCATATCTAAGTGCAAGCTCTTCCAGCTCGGTTTTGAGAGGGAGGGCGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CAA 72 bp TCCACCCGGCTCGTGCAAATCTGCTCACACCCTCCATaGTCCTCACACCAGTCCAGCCTTTTTCTCCTAATA +
Preference number: 6 (lower is better)
Translates to: STRLVQICSHPP*SSHQSSLFLLI
Trigger: TATTAGGAGAAAAAGGCTGGACTGGTGTGAGGACAATGGAGGGTGTGAGCAGATTTGCACGAGCCGGGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CAA 90 bp TGCACATTGTCACACATGGCTGCATACTGTGAGAACTGCAGCTCGTaGCAGCTGGGGGCAAGAGGTCTCTTCTGCATGCCATTGGTTTTC +
Preference number: 6 (lower is better)
Translates to: CTLSHMAAYCENCSS*QLGARGLFCMPLVF
Trigger: GAAAACCAATGGCATGCAGAAGAGACCTCTTGCCCCCAGCTGCAACGAGCTGCAGTTCTCACAGTATGCAGCCATGTGTGACAATGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264037.2
ENST00000392793.6
CDS CAA 90 bp TCATTGATCCTCACGCCCTCCCTCTCAAAACCGAGCTGGAAGAGCTaGCACTTAGATATGGACACTTCCATTTGGGCTGCTTTGCAGGTC +
Preference number: 6 (lower is better)
Translates to: SLILTPSLSKPSWKS*HLDMDTSIWAALQV
Trigger: GACCTGCAAAGCAGCCCAAATGGAAGTGTCCATATCTAAGTGCAAGCTCTTCCAGCTCGGTTTTGAGAGGGAGGGCGTGAGGATCAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS TCA 72 bp GACCATAGGTGCTGTTCTGCATGCTCCGAGGGACTGTaGTGGACAGGAAGGTCTTCCAGTCATATACAACCT +
Preference number: 6 (lower is better)
Translates to: DHRCCSACSEGL*WTGRSSSHIQP
Trigger: AGGTTGTATATGACTGGAAGACCTTCCTGTCCATCACAGTCCCTCGGAGCATGCAGAACAGCACCTATGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000478058.1
ENST00000642222.1
ENST00000645008.1
CDS TCA 72 bp TCAATTCCGCAGCCCCCTGAGCCACATTTCAAGTGCTaGGCAGCCACATGTAGCCACCACATTAAACAGTAC +
Preference number: 6 (lower is better)
Translates to: SIPQPPEPHFKC*AATCSHHIKQY
Trigger: GTACTGTTTAATGTGGTGGCTACATGTGGCTGCTCAGCACTTGAAATGTGGCTCAGGGGGCTGCGGAATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646278.1
CDS GCA 72 bp GTAATAGATCTCGCCTCGAATTCCATTGTGCACATCTaGCCAAAATGGGGCGACGAAGGCTCTCCCATCTGT +
Preference number: 6 (lower is better)
Translates to: VIDLASNSIVHI*PKWGDEGSPIC
Trigger: ACAGATGGGAGAGCCTTCGTCGCCCCATTTTGGGCAGATGTGCACAATGGAATTCGAGGCGAGATCTATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp CTCCCATCTGTCAGGGGAAAGGATTCTGGCGTGAACTaGCTCACTAGCACATTGAAGGAAACAACTCCGTTG +
Preference number: 6 (lower is better)
Translates to: LPSVRGKDSGVN*LTSTLKETTPL
Trigger: CAACGGAGTTGTTTCCTTCAATGTGCTAGTGAGCCAGTTCACGCCAGAATCCTTTCCCCTGACAGATGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CAA 72 bp AATTCCACATTGATCGTGCGGTCCCTGGTGATGATGTaGCCAGTGTTGTTGGCGCTTTCGATCCAGAGTGTG +
Preference number: 6 (lower is better)
Translates to: NSTLIVRSLVMM*PVLLALSIQSV
Trigger: CACACTCTGGATCGAAAGCGCCAACAACACTGGCAACATCATCACCAGGGACCGCACGATCAATGTGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS TCA 72 bp CTCGCAAGGTCACATAATCATCTGTTAGGTCCCCGTTaGAGTTGCCACAGAGACCGCACACTTTGTTCTGCA +
Preference number: 6 (lower is better)
Translates to: LARSHNHLLGPR*SCHRDRTLCSA
Trigger: TGCAGAACAAAGTGTGCGGTCTCTGTGGCAACTTCAACGGGGACCTAACAGATGATTATGTGACCTTGCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS GCA 72 bp AAAGACGGTGACGTGAAAGCGACAGGTCAGGGAGACTaGATTCTCCTCGATGCCAATGGTGTTATCTTTGAG +
Preference number: 6 (lower is better)
Translates to: KDGDVKATGQGD*ILLDANGVIFE
Trigger: CTCAAAGATAACACCATTGGCATCGAGGAGAATGCAGTCTCCCTGACCTGTCGCTTTCACGTCACCGTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS GCA 72 bp TGCACATTGTCACACATGGCTGCATACTGTGAGAACTaGAGCTCGTTGCAGCTCTTCTGCATGCCATTGGTT +
Preference number: 6 (lower is better)
Translates to: CTLSHMAAYCEN*SSLQLFCMPLV
Trigger: AACCAATGGCATGCAGAAGAGCTGCAACGAGCTGCAGTTCTCACAGTATGCAGCCATGTGTGACAATGTGCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CCA 72 bp CACAGGTGGAGTTTATATAGGAGCCTGGGACGGAAATaGAGGCGTAGTGCTGGCCATCAAAAGTCACTAAGA +
Preference number: 6 (lower is better)
Translates to: HRWSLYRSLGRK*RRSAGHQKSLR
Trigger: TCTTAGTGACTTTTGATGGCCAGCACTACGCCTCCATTTCCGTCCCAGGCTCCTATATAAACTCCACCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS TCA 72 bp CATGATGAGAAGAAGCGTCCAGACTTGAAGTTCCATTaGAGAATTAGAGGCTCTGCAGCTCTTGCCGTCCTC +
Preference number: 6 (lower is better)
Translates to: HDEKKRPDLKFH*RIRGSAALAVL
Trigger: GAGGACGGCAAGAGCTGCAGAGCCTCTAATTCTTCAATGGAACTTCAAGTCTGGACGCTTCTTCTCATCATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000646278.1
CDS CCA 72 bp TGTCCTTGGTGGCTCTTTTCAAGATGGCAGGCTCCATaGTCTCTCTGTAATAGATCTCGCCTCGAATTCCAT +
Preference number: 6 (lower is better)
Translates to: CPWWLFSRWQAP*SLCNRSRLEFH
Trigger: ATGGAATTCGAGGCGAGATCTATTACAGAGAGACCATGGAGCCTGCCATCTTGAAAAGAGCCACCAAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CAA 72 bp CCTCGCCGAAGGAATTGTCCCCTTGAGGTGCAGCCATaGGCTGGGTCAATTTCCTTTCCATCAACTTTAAAT +
Preference number: 6 (lower is better)
Translates to: PRRRNCPLEVQP*AGSISFPSTLN
Trigger: ATTTAAAGTTGATGGAAAGGAAATTGACCCAGCCAATGGCTGCACCTCAAGGGGACAATTCCTTCGGCGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CAA 72 bp ATCGTGCGGTCCCTGGTGATGATGTTGCCAGTGTTGTaGGCGCTTTCGATCCAGAGTGTGTTTTTATACATG +
Preference number: 6 (lower is better)
Translates to: IVRSLVMMLPVL*ALSIQSVFLYM
Trigger: CATGTATAAAAACACACTCTGGATCGAAAGCGCCAACAACACTGGCAACATCATCACCAGGGACCGCACGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CAA 90 bp TCCACATTGATCGTGCGGTCCCTGGTGATGATGTTGCCAGTGTTGTaGGCGCTTTCGATCCAGAGTGTGTTTTTATACATGATATGCGTG +
Preference number: 6 (lower is better)
Translates to: STLIVRSLVMMLPVL*ALSIQSVFLYMICV
Trigger: CACGCATATCATGTATAAAAACACACTCTGGATCGAAAGCGCCAACAACACTGGCAACATCATCACCAGGGACCGCACGATCAATGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CAA 90 bp TCAATTTCCTTTCCATCAACTTTAAATGCCCAGCGGCCTGGAACATaGACGTTTGTGGTCTCCTGGATATTCACGATCTCGGGGGTTCTT +
Preference number: 6 (lower is better)
Translates to: SISFPSTLNAQRPGT*TFVVSWIFTISGVL
Trigger: AAGAACCCCCGAGATCGTGAATATCCAGGAGACCACAAACGTCAATGTTCCAGGCCGCTGGGCATTTAAAGTTGATGGAAAGGAAATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CAA 90 bp GCACATGAAAATTCCACATTGATCGTGCGGTCCCTGGTGATGATGTaGCCAGTGTTGTTGGCGCTTTCGATCCAGAGTGTGTTTTTATAC +
Preference number: 6 (lower is better)
Translates to: AHENSTLIVRSLVMM*PVLLALSIQSVFLY
Trigger: GTATAAAAACACACTCTGGATCGAAAGCGCCAACAACACTGGCAACATCATCACCAGGGACCGCACGATCAATGTGGAATTTTCATGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CAA 90 bp GTTCCCCATCTTTCCTTCTTAATTTCTGGAGTTTTCGAGGGAGAGTaGCTGACCGAGTGGCCTTCAAATCTGAATTTCTCCTTCTGGTGG +
Preference number: 6 (lower is better)
Translates to: VPHLSFLISGVFEGE*LTEWPSNLNFSFWW
Trigger: CCACCAGAAGGAGAAATTCAGATTTGAAGGCCACTCGGTCAGCAACTCTCCCTCGAAAACTCCAGAAATTAAGAAGGAAAGATGGGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645008.1
CDS TCA 72 bp CATTGCTATCTCGGGTGGGTGTGGCATAGCATTTGTTaGGTGTTAGGATTAAATGTGTGGCGTCAGCTCCAA +
Preference number: 6 (lower is better)
Translates to: HCYLGWVWHSIC*VLGLNVWRQLQ
Trigger: TTGGAGCTGACGCCACACATTTAATCCTAACACTCAACAAATGCTATGCCACACCCACCCGAGATAGCAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS GCA 72 bp ATTGGCTGGGTCAATTTCCTTTCCATCAACTTTAAATaGCCAGCGGCCTGGAACATTGACGTTTGTGGTCTC +
Preference number: 6 (lower is better)
Translates to: IGWVNFLSINFK*PAAWNIDVCGL
Trigger: GAGACCACAAACGTCAATGTTCCAGGCCGCTGGGCATTTAAAGTTGATGGAAAGGAAATTGACCCAGCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp GACCTATGTCTGAGTACTGGACAGTCACCACGCCCTTaGACTCCACTGTCGTACTGTTTTTGTTTCGATAAA +
Preference number: 6 (lower is better)
Translates to: DLCLSTGQSPRP*TPLSYCFCFDK
Trigger: TTTATCGAAACAAAAACAGTACGACAGTGGAGTCCAAGGGCGTGGTGACTGTCCAGTACTCAGACATAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp TGGAAGAGCTTGCACTTAGATATGGACACTTCCATTTaGGCTGCTTTGCAGGTCACCTCTGCATCGATAATG +
Preference number: 6 (lower is better)
Translates to: WKSLHLDMDTSI*AALQVTSASIM
Trigger: CATTATCGATGCAGAGGTGACCTGCAAAGCAGCCCAAATGGAAGTGTCCATATCTAAGTGCAAGCTCTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CCA 72 bp ACTCAATTTGCTCTGACTTCTAGGGAGTTGGAAGACTaGCCTTCCCAGAGCAATCAAGAAAGAGGAGAAGCT +
Preference number: 6 (lower is better)
Translates to: TQFALTSRELED*PSQSNQERGEA
Trigger: AGCTTCTCCTCTTTCTTGATTGCTCTGGGAAGGCCAGTCTTCCAACTCCCTAGAAGTCAGAGCAAATTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478058.1
CDS CAA 72 bp TTTCCATCAACTTTAAATGCCCAGCGGCCTGGAACATaGACGTTTGTGGTCTCCTGGATATTCACGATCTCG +
Preference number: 6 (lower is better)
Translates to: FPSTLNAQRPGT*TFVVSWIFTIS
Trigger: CGAGATCGTGAATATCCAGGAGACCACAAACGTCAATGTTCCAGGCCGCTGGGCATTTAAAGTTGATGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CAA 72 bp CTGGAAGAGCTTGCACTTAGATATGGACACTTCCATTaGGGCTGCTTTGCAGGTCACCTCTGCATCGATAAT +
Preference number: 6 (lower is better)
Translates to: LEELALRYGHFH*GCFAGHLCIDN
Trigger: ATTATCGATGCAGAGGTGACCTGCAAAGCAGCCCAAATGGAAGTGTCCATATCTAAGTGCAAGCTCTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CAA 90 bp AATTCCACATTGATCGTGCGGTCCCTGGTGATGATGTTGCCAGTGTaGTTGGCGCTTTCGATCCAGAGTGTGTTTTTATACATGATATGC +
Preference number: 6 (lower is better)
Translates to: NSTLIVRSLVMMLPV*LALSIQSVFLYMIC
Trigger: GCATATCATGTATAAAAACACACTCTGGATCGAAAGCGCCAACAACACTGGCAACATCATCACCAGGGACCGCACGATCAATGTGGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CCA 72 bp AATGACGTTGAAACCATTGTAGTATATCTGGATGTCTaGGCTGGTGTCAATCACCAGAAACCCCTCACTGCT +
Preference number: 6 (lower is better)
Translates to: NDVETIVVYLDV*AGVNHQKPLTA
Trigger: AGCAGTGAGGGGTTTCTGGTGATTGACACCAGCCCAGACATCCAGATATACTACAATGGTTTCAACGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CAA 90 bp TGGAAGAGCTTGCACTTAGATATGGACACTTCCATTTGGGCTGCTTaGCAGGTCACCTCTGCATCGATAATGTCATGTGAGTTATTTCCA +
Preference number: 6 (lower is better)
Translates to: WKSLHLDMDTSIWAA*QVTSASIMSCELFP
Trigger: TGGAAATAACTCACATGACATTATCGATGCAGAGGTGACCTGCAAAGCAGCCCAAATGGAAGTGTCCATATCTAAGTGCAAGCTCTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS TCA 72 bp TGTTGGCGCTTTCGATCCAGAGTGTGTTTTTATACATaGTATGCGTGCCATTGGACTGCACAATGTTTCCAC +
Preference number: 6 (lower is better)
Translates to: CWRFRSRVCFYT*YACHWTAQCFH
Trigger: GTGGAAACATTGTGCAGTCCAATGGCACGCATATCATGTATAAAAACACACTCTGGATCGAAAGCGCCAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS TCA 72 bp ATCCAAGGAGATCTTGATATCCAGCTCATAAGCACATaGAAATTCCACATTGATCGTGCGGTCCCTGGTGAT +
Preference number: 6 (lower is better)
Translates to: IQGDLDIQLIST*KFHIDRAVPGD
Trigger: ATCACCAGGGACCGCACGATCAATGTGGAATTTTCATGTGCTTATGAGCTGGATATCAAGATCTCCTTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS TCA 72 bp GAAATCTGGATCATGATGAGAAGAAGCGTCCAGACTTaGAGTTCCATTGAAGAATTAGAGGCTCTGCAGCTC +
Preference number: 6 (lower is better)
Translates to: EIWIMMRRSVQT*SSIEELEALQL
Trigger: GAGCTGCAGAGCCTCTAATTCTTCAATGGAACTTCAAGTCTGGACGCTTCTTCTCATCATGATCCAGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000646278.1
CDS CCA 72 bp GAGAGCCATCTTGGTGATGAAGCTGCCTTCTTGGGTTaGAACTGTCAGGTTAATTACACTAAAACGGAAACA +
Preference number: 6 (lower is better)
Translates to: ESHLGDEAAFLG*NCQVNYTKTET
Trigger: TGTTTCCGTTTTAGTGTAATTAACCTGACAGTTCCAACCCAAGAAGGCAGCTTCATCACCAAGATGGCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646278.1
CDS CAA 72 bp TTTGGTTGCCAAACCAGTTATAAATGGAACATTCACTaGTGTGCCATTCACCTTGACCGTGTTCCGGTCGTT +
Preference number: 6 (lower is better)
Translates to: FGCQTSYKWNIH*CAIHLDRVPVV
Trigger: AACGACCGGAACACGGTCAAGGTGAATGGCACACAAGTGAATGTTCCATTTATAACTGGTTTGGCAACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS GCA 72 bp GCGCTTTCGATCCAGAGTGTGTTTTTATACATGATATaGGTGCCATTGGACTGCACAATGTTTCCACAATTC +
Preference number: 6 (lower is better)
Translates to: ALSIQSVFLYMI*VPLDCTMFPQF
Trigger: GAATTGTGGAAACATTGTGCAGTCCAATGGCACGCATATCATGTATAAAAACACACTCTGGATCGAAAGCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS CAA 72 bp ATCTCAGATGAGCTTCCATCATCTACTTTAGGGGTTTaGGTGTCATTCTGCCAAAATGGATACATGAGCTCC +
Preference number: 6 (lower is better)
Translates to: ISDELPSSTLGV*VSFCQNGYMSS
Trigger: GGAGCTCATGTATCCATTTTGGCAGAATGACACCAAAACCCCTAAAGTAGATGATGGAAGCTCATCTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
CDS CCA 72 bp ACTGCTGTAGATTTTGGTTGCCAAACCAGTTATAAATaGAACATTCACTTGTGTGCCATTCACCTTGACCGT +
Preference number: 6 (lower is better)
Translates to: TAVDFGCQTSYK*NIHLCAIHLDR
Trigger: ACGGTCAAGGTGAATGGCACACAAGTGAATGTTCCATTTATAACTGGTTTGGCAACCAAAATCTACAGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS GCA 72 bp AATCACCAGAAACCCCTCACTGCTGTAGATTTTGGTTaGCAAACCAGTTATAAATGGAACATTCACTTGTGT +
Preference number: 6 (lower is better)
Translates to: NHQKPLTAVDFG*QTSYKWNIHLC
Trigger: ACACAAGTGAATGTTCCATTTATAACTGGTTTGGCAACCAAAATCTACAGCAGTGAGGGGTTTCTGGTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264037.2
ENST00000392793.6
ENST00000642222.1
ENST00000645008.1
ENST00000646278.1
CDS TCA 72 bp GAAATCTGGATCATGATGAGAAGAAGCGTCCAGACTTaGAGTTCCATTGAAGAATTAGAGGCTTTATATTTT +
Preference number: 6 (lower is better)
Translates to: EIWIMMRRSVQT*SSIEELEALYF
Trigger: AAAATATAAAGCCTCTAATTCTTCAATGGAACTTCAAGTCTGGACGCTTCTTCTCATCATGATCCAGATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645008.1
CDS GCA 72 bp TCATGCTTCATTCAGATAACAAACTCAGTTCCAAAGTaGATATCCTTAAATTGCTACTCAATTTGCTCTGAC +
Preference number: 6 (lower is better)
Translates to: SCFIQITNSVPK*ISLNCYSICSD
Trigger: GTCAGAGCAAATTGAGTAGCAATTTAAGGATATGCACTTTGGAACTGAGTTTGTTATCTGAATGAAGCATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478058.1