RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TDRD7 (Homo sapiens)

Ensembl gene IDs: ENSG00000196116

Ensembl transcript IDs: ENST00000355295.5, ENST00000492428.1

Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp AAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGCCAGAGTCCAGGAACTaGACATCAAGAGCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: KHILFNPPQQSEPCSRVKPESRN*TSRARL
Trigger: CAGCCGGGCTCTTGATGTTCAGTTCCTGGACTCTGG...CTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCCCTGCCAAGGCTGGATaGCGAAGTAGCCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSPAKAG*RSSLGD
Trigger: GTCACCCAGGCTACTTCGTCATCCAGCCTTGGCAGG...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp AAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGATGACGAAGTAGCCTaGGTGACAGGCCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: KHKHILFNPPQQSEPCSRDDEVA*VTGHRH
Trigger: GTGCCTGTGGCCTGTCACCCAGGCTACTTCGTCATC...TCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCCTGCAAGTTGAGCTGTaGCTGCTTGGAAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSLQVEL*LLGRAA
Trigger: AGCTGCCCTTCCAAGCAGTCACAGCTCAACTTGCAG...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp AAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGGTGGCAGTTCCTCTGTaGAGAAAGCGCTCGTATGGT +
Preference number: 4 (lower is better)
Translates to: KHILFNPPQQSEPCSRVKVAVPL*RKRSYG
Trigger: ACCATACGAGCGCTTTCTCCACAGAGGAACTGCCAC...CTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp AAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGTTCTCCACTGCTATGTaGCGCTCTTCAGACACGCTG +
Preference number: 4 (lower is better)
Translates to: KHILFNPPQQSEPCSRVKFSTAM*RSSDTL
Trigger: CAGCGTGTCTGAAGAGCGCCACATAGCAGTGGAGAA...CTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp AAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGCCTCCTCAGACCACTaGTTGCACTTCACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: KHKHILFNPPQQSEPCSRASSDH*LHFTPA
Trigger: TGCAGGAGTGAAGTGCAACCAGTGGTCTGAGGAGGC...TCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCATCTGCAAAGGTGGTTaGAGGGACGCCTTTGGGCTA +
Preference number: 4 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSICKGG*RDAFGL
Trigger: TAGCCCAAAGGCGTCCCTTCAACCACCTTTGCAGAT...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCGCGTCAACCTGCAGGTaGACCTCTAGTGACTTGTCA +
Preference number: 4 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSASTCR*TSSDLS
Trigger: TGACAAGTCACTAGAGGTTCACCTGCAGGTTGACGC...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp AAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGTTCTTGCAGTTTCTGTaGAGGCCATGGCATAGCAGG +
Preference number: 4 (lower is better)
Translates to: KHILFNPPQQSEPCSRVKFLQFL*RPWHSR
Trigger: CCTGCTATGCCATGGCCTGCACAGAAACTGCAAGAA...CTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp CATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGATTTTTACGGCCAGCAACTaGCCAACATTCACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: HILFNPPQQSEPCSRVKIFTASN*PTFTAW
Trigger: CCAGGCTGTGAATGTTGGGCAGTTGCTGGCCGTAAA...AATCTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp AAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGACACCCTTTCAACGGTaGTGTTTGTTTGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: KHILFNPPQQSEPCSRVKTPFQR*CLFGTR
Trigger: CCTGGTCCCAAACAAACACCACCGTTGAAAGGGTGT...CTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCCTTTCGGAAGTGCACTaGCCCAAAGGCCACTTGTGT +
Preference number: 4 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSLSEVH*PKGHLC
Trigger: ACACAAGTGGCCTTTGGGCCAGTGCACTTCCGAAAG...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp AAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGCCACAGCACTGCATCTaGTGTCCACATGCCAATAGA +
Preference number: 4 (lower is better)
Translates to: KHILFNPPQQSEPCSRVKPQHCI*CPHANR
Trigger: TCTATTGGCATGTGGACACCAGATGCAGTGCTGTGG...CTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp TCTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCAGGAAACCTAGCTGTTTaGAGGGGATCCAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SFIKHKHILFNPPQQSEPGNLAV*RGSSLQ
Trigger: CTGGAGACTGGATCCCCTTCAAACAGCTAGGTTTCC...TGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp CTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATTCTCTTCTGTTGAGATaGCCTGTGCCCGTAACCAGG +
Preference number: 4 (lower is better)
Translates to: LSSNISIFFSIPHSSQSHSLLLR*PVPVTR
Trigger: CCTGGTTACGGGCACAGGTCATCTCAACAGAAGAGA...ATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGCCCGGCTGCTGTaGACATTTGTGATCTCTACT +
Preference number: 4 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSRARLL*TFVIST
Trigger: AGTAGAGATCACAAATGTTCACAGCAGCCGGGCTCT...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp AAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGGAGGTGGAATTTCCCTaGGCTCTGACACTTTTACAG +
Preference number: 4 (lower is better)
Translates to: KHILFNPPQQSEPCSRVKEVEFP*ALTLLQ
Trigger: CTGTAAAAGTGTCAGAGCTCAGGGAAATTCCACCTC...CTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp CTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATAATCTTGGCCACCACTaGAAGGTTTCTCCACCGTGC +
Preference number: 4 (lower is better)
Translates to: LSSNISIFFSIPHSSQSHNLGHH*KVSPPC
Trigger: GCACGGTGGAGAAACCTTGCAGTGGTGGCCAAGATT...ATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAAATGCTTTCGGAAGTaGACTGGCCCAAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSKCFRK*TGPKAT
Trigger: AGTGGCCTTTGGGCCAGTGCACTTCCGAAAGCATTT...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp CATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGATTCCGACATGGGCATGTTaGCATTTTTGCTGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: HILFNPPQQSEPCSRVKIPTWAC*HFCCWE
Trigger: CTCCCAACAGCAAAAATGGCAACATGCCCATGTCGG...AATCTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp AAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGACCTCAGACCACTGGTTaGACTTCACTCCTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: KHKHILFNPPQQSEPCSRPQTTG*TSLLQV
Trigger: AACTTGCAGGAGTGAAGTGCAACCAGTGGTCTGAGG...TCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp CATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGATTGATCTGTACTCTCCTTaGAGCCGGGGTAATGCTACT +
Preference number: 4 (lower is better)
Translates to: HILFNPPQQSEPCSRVKIDLYSP*SRGNAT
Trigger: AGTAGCATTACCCCGGCTCCAAGGAGAGTACAGATC...AATCTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCATGCATCTGCAAAGGTaGTTGAAGGGACGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSMHLQR*LKGRLW
Trigger: CCAAAGGCGTCCCTTCAACCACCTTTGCAGATGCAT...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp CATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGATTACGGTGGTGTTTGTTTaGGACCAGGTAGTGGGGATA +
Preference number: 4 (lower is better)
Translates to: HILFNPPQQSEPCSRVKITVVFV*DQVVGI
Trigger: TATCCCCACTACCTGGTCCCAAACAAACACCACCGT...AATCTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCTCCTGCCATAACTGTTaGACACCCTTTCAACGGTGG +
Preference number: 4 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSSCHNC*TPFQRW
Trigger: CCACCGTTGAAAGGGTGTCCAACAGTTATGGCAGGA...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp TCTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCACCTGGCTTTGATAAGTaGACAGGAGGTGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SFIKHKHILFNPPQQSEPPGFDK*TGGGSS
Trigger: GGAACTGCCACCTCCTGTCCACTTATCAAAGCCAGG...TGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAAGAGGCAGGAGGCTTaGCATTGGGTTTTTCAACAG +
Preference number: 4 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSKRQEA*HWVFQQ
Trigger: CTGTTGAAAAACCCAATGTCAAGCCTCCTGCCTCTT...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCTCCACCGTGCAAATATaGGGCCAGTGTTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSSTVQI*GQCSNC
Trigger: ACAGTTTGAACACTGGCCTCATATTTGCACGGTGGA...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp CTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATTTCACTCCTGCAAGTTaGGCTGTGACTGCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: LSSNISIFFSIPHSSQSHFTPAS*AVTAWK
Trigger: CTTCCAAGCAGTCACAGCTCAACTTGCAGGAGTGAA...ATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCGTGGACATGGTCACATaGCTTTGCACTGGAATGTCT +
Preference number: 4 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSVDMVT*LCTGMS
Trigger: AGACATTCCAGTGCAAAGGCATGTGACCATGTCCAC...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp AAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGAAGGTTTCTCCACCGTaGAAATATGAGGCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: KHILFNPPQQSEPCSRVKKVSPP*KYEASV
Trigger: AACACTGGCCTCATATTTGCACGGTGGAGAAACCTT...CTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp AAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGTTACAGATGTCACAGTaGCAGAGTCCAGGAACTGAA +
Preference number: 4 (lower is better)
Translates to: KHILFNPPQQSEPCSRVKLQMSQ*QSPGTE
Trigger: TTCAGTTCCTGGACTCTGGCACTGTGACATCTGTAA...CTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp CTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATAATTCTCTCCAGTGTTaGCCGACATGGGCATGTTGC +
Preference number: 4 (lower is better)
Translates to: LSSNISIFFSIPHSSQSHNSLQC*PTWACC
Trigger: GCAACATGCCCATGTCGGGCAACACTGGAGAGAATT...ATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp CTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATAAGTTGAGCTGTGACTaGTTGGAAGGGCAGCTTTCG +
Preference number: 4 (lower is better)
Translates to: LSSNISIFFSIPHSSQSHKLSCD*LEGQLS
Trigger: CGAAAGCTGCCCTTCCAAGCAGTCACAGCTCAACTT...ATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp TCTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATATCCTGACCACTGCTaGCACACTTCTCAGATAGGC +
Preference number: 4 (lower is better)
Translates to: SFIKHKHILFNPPQQSEPYPDHC*HTSQIG
Trigger: GCCTATCTGAGAAGTGTGCCAGCAGTGGTCAGGATA...TGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp AAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGATGTTGTTGGTGGACATaGTCACATGCCTTTGCACTG +
Preference number: 4 (lower is better)
Translates to: KHKHILFNPPQQSEPCSRCCWWT*SHAFAL
Trigger: CAGTGCAAAGGCATGTGACCATGTCCACCAACAACA...TCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp CATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGATTTTGAAGGGACGCCTTTaGGCTAAACCTGTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: HILFNPPQQSEPCSRVKILKGRL*AKPVVG
Trigger: ACCAACAACAGGTTTAGCCCAAAGGCGTCCCTTCAA...AATCTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp TCTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGCCATTTTTGCTGTTaGGAGAGTCAGCTCCACTGG +
Preference number: 4 (lower is better)
Translates to: SFIKHKHILFNPPQQSEPCHFCC*ESQLHW
Trigger: CCAGTGGAGCTGACTCTCCCAACAGCAAAAATGGCA...TGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp CTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATCAGTGTTGCCCGACATaGGCATGTTGCCATTTTTGC +
Preference number: 4 (lower is better)
Translates to: LSSNISIFFSIPHSSQSHQCCPT*ACCHFC
Trigger: GCAAAAATGGCAACATGCCCATGTCGGGCAACACTG...ATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCGAGAAAGCGCTCGTATaGTCCACCATGGACTTTTTG +
Preference number: 4 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSEKALV*STMDFL
Trigger: CAAAAAGTCCATGGTGGACCATACGAGCGCTTTCTC...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp TCTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCAGCTACTCCATTCTTATaGGACTGCAGAACAGCTCGT +
Preference number: 4 (lower is better)
Translates to: SFIKHKHILFNPPQQSEPATPFL*DCRTAR
Trigger: ACGAGCTGTTCTGCAGTCTCATAAGAATGGAGTAGC...TGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp AAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGACTTAGTAGAGGTTCTTaGGAGATGCATCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: KHKHILFNPPQQSEPCSRLSRGS*EMHLQR
Trigger: CCTTTGCAGATGCATCTCTCAAGAACCTCTACTAAG...TCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp CTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATTACGTAGAAGGTCACTaGGCTTGTTCAGACCCTTAC +
Preference number: 4 (lower is better)
Translates to: LSSNISIFFSIPHSSQSHYVEGH*ACSDPY
Trigger: GTAAGGGTCTGAACAAGCTCAGTGACCTTCTACGTA...ATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp CTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATCTCTATCCTGACCACTaGTGGCACACTTCTCAGATA +
Preference number: 4 (lower is better)
Translates to: LSSNISIFFSIPHSSQSHLYPDH*WHTSQI
Trigger: TATCTGAGAAGTGTGCCAGCAGTGGTCAGGATAGAG...ATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp CATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGATTGTACATTTCCTCAAATaGTTTCGGAAGTGCACTGGC +
Preference number: 4 (lower is better)
Translates to: HILFNPPQQSEPCSRVKIVHFLK*FRKCTG
Trigger: GCCAGTGCACTTCCGAAAGCATTTGAGGAAATGTAC...AATCTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp AAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAACCATGTGCTTGCCCTaGATCCTTTTGGATTTTGTC +
Preference number: 4 (lower is better)
Translates to: KHKHILFNPPQQSEPCSRTMCLP*ILLDFV
Trigger: GACAAAATCCAAAAGGATGCAGGGCAAGCACATGGT...TCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp TCTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATTGGTCTTTCTCCACTaGTATGTGGCGCTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SFIKHKHILFNPPQQSEPLVFLH*YVALFR
Trigger: TCTGAAGAGCGCCACATAGCAGTGGAGAAAGACCAA...TGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp TCTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATTTTCAATGACTGTCTaGACCAGTGCCACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: SFIKHKHILFNPPQQSEPFSMTV*TSATRG
Trigger: ACCTCTGGTGGCACTGGTGCAGACAGTCATTGAAAA...TGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp AAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGATGCCCTGCATCCTTTTaGATTTTGTCAGTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: KHKHILFNPPQQSEPCSRCPASF*ILSVGN
Trigger: ATTGCCCACTGACAAAATCCAAAAGGATGCAGGGCA...TCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp CTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATCCAACATTCACAGCCTaGACTGGTGTGATCTTAGGA +
Preference number: 4 (lower is better)
Translates to: LSSNISIFFSIPHSSQSHPTFTA*TGVILG
Trigger: TCCTAAGATCACACCAGTCCAGGCTGTGAATGTTGG...ATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp CATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGATTGCACTGGAATGTCTTTaGATGCTTCATTTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: HILFNPPQQSEPCSRVKIALECL*MLHFQE
Trigger: CTCTTGGAAATGAAGCATTCAAAGACATTCCAGTGC...AATCTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCCACCAATACAGATGGTaGTGCTTCAGTTGGAATCAT +
Preference number: 4 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSHQYRW*CFSWNH
Trigger: ATGATTCCAACTGAAGCATCACCATCTGTATTGGTG...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp AAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGATATCATCTTCTCCTaGGGTATCGTACAGAACAAC +
Preference number: 4 (lower is better)
Translates to: KHKHILFNPPQQSEPCSRDIIFS*GIVQNN
Trigger: GTTGTTCTGTACGATACCTCAGGAGAAGATGATATC...TCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp CATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGATTAATTTCCCTGAGCTCTaGCACTTTTACAGATGTCAC +
Preference number: 4 (lower is better)
Translates to: HILFNPPQQSEPCSRVKINFPEL*HFYRCH
Trigger: GTGACATCTGTAAAAGTGTCAGAGCTCAGGGAAATT...AATCTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp TCTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCAAAGCTGAGCAATTCTTaGAGTTTCTGTGCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: SFIKHKHILFNPPQQSEPKLSNS*SFCAGH
Trigger: ATGGCCTGCACAGAAACTGCAAGAATTGCTCAGCTT...TGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCTTCTTTAAAGTCTCCTaGCATAACTGTTGGACACCC +
Preference number: 4 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSFFKVS*HNCWTP
Trigger: GGGTGTCCAACAGTTATGGCAGGAGACTTTAAAGAA...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp AAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAATCATTATCACCATGTaGTTGCCCTGCATCCTTTTG +
Preference number: 4 (lower is better)
Translates to: KHKHILFNPPQQSEPCSRIIITM*LPCILL
Trigger: CAAAAGGATGCAGGGCAAGCACATGGTGATAATGAT...TCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp CTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATCAGAGGTCATGTGCTTaGAATGGAAGTAGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LSSNISIFFSIPHSSQSHQRSCA*NGSSPL
Trigger: TAGAGGACTACTTCCATTGCAAGCACATGACCTCTG...ATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp TCTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCACAGCTCCACTGGATATaGCACTCAAAAACACATCCT +
Preference number: 4 (lower is better)
Translates to: SFIKHKHILFNPPQQSEPQLHWI*HSKTHP
Trigger: AGGATGTGTTTTTGAGTGCCATATCCAGTGGAGCTG...TGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp AAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGATTTGCAGCATACACTTaGTCTTTCTCCACTGCTATG +
Preference number: 4 (lower is better)
Translates to: KHKHILFNPPQQSEPCSRFAAYT*SFSTAM
Trigger: CATAGCAGTGGAGAAAGACCAAGTGTATGCTGCAAA...TCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp CATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGATTGCCAACAGAAAAATTTaGAGCAAATCCTGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: HILFNPPQQSEPCSRVKIANRKI*SKSWLS
Trigger: AGACAACCAGGATTTGCTTCAAATTTTTCTGTTGGC...AATCTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCGGTTTCTTCTCCACATaGTTTCGAAACACCATAGAA +
Preference number: 4 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSGFFST*FRNTIE
Trigger: TTCTATGGTGTTTCGAAATCATGTGGAGAAGAAACC...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp AAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGATCTGACATAAAATCATaGATCCAGGTATCGGTGTCT +
Preference number: 4 (lower is better)
Translates to: KHKHILFNPPQQSEPCSRSDIKS*IQVSVS
Trigger: AGACACCGATACCTGGATTCATGATTTTATGTCAGA...TCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp AAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAATGGTCACATGCCTTTaGACTGGAATGTCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: KHKHILFNPPQQSEPCSRMVTCL*TGMSLN
Trigger: ATTCAAAGACATTCCAGTGCAAAGGCATGTGACCAT...TCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCTTTCACCAGCAGGTCTaGCACTTTTTCTTTAAAGTC +
Preference number: 4 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSFHQQV*HFFFKV
Trigger: GACTTTAAAGAAAAAGTGGCAGACCTGCTGGTGAAA...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp TCTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCAATTCACAGCCTGGACTaGTGTGATCTTAGGATTCTT +
Preference number: 4 (lower is better)
Translates to: SFIKHKHILFNPPQQSEPIHSLD*CDLRIL
Trigger: AAGAATCCTAAGATCACACCAGTCCAGGCTGTGAAT...TGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp CATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGATTGTACAGAACAACAAGTaGAATGTCAGCTTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: HILFNPPQQSEPCSRVKIVQNNK*NVSFVK
Trigger: CTTGACAAAGCTGACATTCCACTTGTTGTTCTGTAC...AATCTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCCTTAATGGCCTGAGGTaGTATTGCAATCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSLNGLR*YCNHFL
Trigger: CAAGAAATGATTGCAATACCACCTCAGGCCATTAAG...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR TCA 90 bp CTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATTGCTGTGAACATTTGTaGTCTCTACTCGTAACCATT +
Preference number: 4 (lower is better)
Translates to: LSSNISIFFSIPHSSQSHCCEHL*SLLVTI
Trigger: AATGGTTACGAGTAGAGATCACAAATGTTCACAGCA...ATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp CATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGATTCAGAAATGTAGTCTATaGTGCATACATCAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: HILFNPPQQSEPCSRVKIQKCSL*CIHQKV
Trigger: CACTTTCTGATGTATGCAGCATAGACTACATTTCTG...AATCTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp TCTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCACCACTTCATTTGTGTTaGTCAGTTCAACCACCAATA +
Preference number: 4 (lower is better)
Translates to: SFIKHKHILFNPPQQSEPPLHLC*SVQPPI
Trigger: TATTGGTGGTTGAACTGAGCAACACAAATGAAGTGG...TGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp AAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGATGGAATGTCTTTGAATaGTTCATTTCCAAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: KHKHILFNPPQQSEPCSRWNVFE*FISKSC
Trigger: ACAACTCTTGGAAATGAAGCATTCAAAGACATTCCA...TCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp CTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATAAATGTAGTCTATGCTaGATACATCAGAAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LSSNISIFFSIPHSSQSHKCSLC*IHQKVR
Trigger: CCTCACTTTCTGATGTATGCAGCATAGACTACATTT...ATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CCA 90 bp CTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATCAGATACCAGTCCATTaGTCAGGATTCCTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: LSSNISIFFSIPHSSQSHQIPVH*SGFLLK
Trigger: TTTTAAAAGGAATCCTGACCAATGGACTGGTATCTG...ATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR GCA 90 bp CTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATTTTAAAAGCACCCTGTaGCACTTATTTTCCACTTTT +
Preference number: 4 (lower is better)
Translates to: LSSNISIFFSIPHSSQSHFKSTL*HLFSTF
Trigger: AAAAGTGGAAAATAAGTGGCACAGGGTGCTTTTAAA...ATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS GCA 90 bp TGTGCCCGTAACCAGGCGTCCTCCTCGGCATTTACGGCCAGCAACTaGCCAACATTCACAGCCTGGACTGGTGTGATCTTAGGATTCTTA +
Preference number: 5 (lower is better)
Translates to: CARNQASSSAFTASN*PTFTAWTGVILGFL
Trigger: TAAGAATCCTAAGATCACACCAGTCCAGGCTGTGAATGTTGGGCAGTTGCTGGCCGTAAATGCCGAGGAGGACGCCTGGTTACGGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS TCA 90 bp CTTCCATCAGAACTTCCAACTTATGTATCTCCTGCCAAGGCTGGATaGCGAAGTAGCCTGGGTGACAGGCCACAGGCACATACACATCCA +
Preference number: 5 (lower is better)
Translates to: LPSELPTYVSPAKAG*RSSLGDRPQAHTHP
Trigger: TGGATGTGTATGTGCCTGTGGCCTGTCACCCAGGCTACTTCGTCATCCAGCCTTGGCAGGAGATACATAAGTTGGAAGTTCTGATGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS TCA 90 bp TCAATGACTGTCTGCACCAGTGCCACCAGAGGTTTCTTCTCCACATaGTTTCGAAACACCATAGAAGCCTCCTCAGACCACTGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: SMTVCTSATRGFFST*FRNTIEASSDHWLH
Trigger: GTGCAACCAGTGGTCTGAGGAGGCTTCTATGGTGTTTCGAAATCATGTGGAGAAGAAACCTCTGGTGGCACTGGTGCAGACAGTCATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CCA 90 bp TCTCTCCAGTGTTGCCCGACATGGGCATGTTGCCATTTTTGCTGTTaGGAGAGTCAGCTCCACTGGATATGGCACTCAAAAACACATCCT +
Preference number: 5 (lower is better)
Translates to: SLQCCPTWACCHFCC*ESQLHWIWHSKTHP
Trigger: AGGATGTGTTTTTGAGTGCCATATCCAGTGGAGCTGACTCTCCCAACAGCAAAAATGGCAACATGCCCATGTCGGGCAACACTGGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CCA 90 bp AAGTGGACAGGAGGTGGCAGTTCCTCTGTGGAGAAAGCGCTCGTATaGTCCACCATGGACTTTTTGATGACATCTGTGAGGTTCTTTCTG +
Preference number: 5 (lower is better)
Translates to: KWTGGGSSSVEKALV*STMDFLMTSVRFFL
Trigger: CAGAAAGAACCTCACAGATGTCATCAAAAAGTCCATGGTGGACCATACGAGCGCTTTCTCCACAGAGGAACTGCCACCTCCTGTCCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS TCA 90 bp TGTGCTTGCAATGGAAGTAGTCCTCTATCTTACGTAGAAGGTCACTaGGCTTGTTCAGACCCTTACAAGGCACCTGGCAGTAGAGTGTCC +
Preference number: 5 (lower is better)
Translates to: CACNGSSPLSYVEGH*ACSDPYKAPGSRVS
Trigger: GGACACTCTACTGCCAGGTGCCTTGTAAGGGTCTGAACAAGCTCAGTGACCTTCTACGTAAGATAGAGGACTACTTCCATTGCAAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS GCA 90 bp AAGTGCACTGGCCCAAAGGCCACTTGTGTATTTCACCAGCAGGTCTaGCACTTTTTCTTTAAAGTCTCCTGCCATAACTGTTGGACACCC +
Preference number: 5 (lower is better)
Translates to: KCTGPKATCVFHQQV*HFFFKVSCHNCWTP
Trigger: GGGTGTCCAACAGTTATGGCAGGAGACTTTAAAGAAAAAGTGGCAGACCTGCTGGTGAAATACACAAGTGGCCTTTGGGCCAGTGCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS TCA 90 bp GATCTGTACTCTCCTTGGAGCCGGGGTAATGCTACTCCATTCTTATaGGACTGCAGAACAGCTCGTAGCATCTTTGAAACCAGATCTCCT +
Preference number: 5 (lower is better)
Translates to: DLYSPWSRGNATPFL*DCRTARSIFETRSP
Trigger: AGGAGATCTGGTTTCAAAGATGCTACGAGCTGTTCTGCAGTCTCATAAGAATGGAGTAGCATTACCCCGGCTCCAAGGAGAGTACAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS TCA 90 bp ATTTCCTTAGTAGAGGTTCTTGAGAGATGCATCTGCAAAGGTGGTTaGAGGGACGCCTTTGGGCTAAACCTGTTGTTGGTGGACATGGTC +
Preference number: 5 (lower is better)
Translates to: ISLVEVLERCICKGG*RDAFGLNLLLVDMV
Trigger: GACCATGTCCACCAACAACAGGTTTAGCCCAAAGGCGTCCCTTCAACCACCTTTGCAGATGCATCTCTCAAGAACCTCTACTAAGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp AAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGACATCTGCAAAGGTGGTaGAAGGGACGCCTTTGGGCT +
Preference number: 5 (lower is better)
Translates to: KHKHILFNPPQQSEPCSRHLQRW*KGRLWA
Trigger: AGCCCAAAGGCGTCCCTTCAACCACCTTTGCAGATG...TCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp AAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGCCCGACATGGGCATGTaGCCATTTTTGCTGTTGGGA +
Preference number: 5 (lower is better)
Translates to: KHILFNPPQQSEPCSRVKPDMGM*PFLLLG
Trigger: TCCCAACAGCAAAAATGGCAACATGCCCATGTCGGG...CTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS GCA 90 bp AGGGACGCCTTTGGGCTAAACCTGTTGTTGGTGGACATGGTCACATaGCTTTGCACTGGAATGTCTTTGAATGCTTCATTTCCAAGAGTT +
Preference number: 5 (lower is better)
Translates to: RDAFGLNLLLVDMVT*LCTGMSLNASFPRV
Trigger: AACTCTTGGAAATGAAGCATTCAAAGACATTCCAGTGCAAAGGCATGTGACCATGTCCACCAACAACAGGTTTAGCCCAAAGGCGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS GCA 90 bp TTTCCGGTCCCAAGGGTTAGCATTTTCAATGACTGTCTGCACCAGTaGCACCAGAGGTTTCTTCTCCACATGATTTCGAAACACCATAGA +
Preference number: 5 (lower is better)
Translates to: FPVPRVSIFNDCLHQ*HQRFLLHMISKHHR
Trigger: TCTATGGTGTTTCGAAATCATGTGGAGAAGAAACCTCTGGTGGCACTGGTGCAGACAGTCATTGAAAATGCTAACCCTTGGGACCGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CCA 90 bp CTCGGCATTTACGGCCAGCAACTGCCCAACATTCACAGCCTGGACTaGTGTGATCTTAGGATTCTTACTGTAATATTCCTTCATCTCATC +
Preference number: 5 (lower is better)
Translates to: LGIYGQQLPNIHSLD*CDLRILTVIFLHLI
Trigger: GATGAGATGAAGGAATATTACAGTAAGAATCCTAAGATCACACCAGTCCAGGCTGTGAATGTTGGGCAGTTGCTGGCCGTAAATGCCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CCA 90 bp GCATGTTGCCATTTTTGCTGTTGGGAGAGTCAGCTCCACTGGATATaGCACTCAAAAACACATCCTTCTGATGCTTCCACAAGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: ACCHFCCWESQLHWI*HSKTHPSDASTSLH
Trigger: ATGCAGACTTGTGGAAGCATCAGAAGGATGTGTTTTTGAGTGCCATATCCAGTGGAGCTGACTCTCCCAACAGCAAAAATGGCAACATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CCA 90 bp ACATGGGCATGTTGCCATTTTTGCTGTTGGGAGAGTCAGCTCCACTaGATATGGCACTCAAAAACACATCCTTCTGATGCTTCCACAAGT +
Preference number: 5 (lower is better)
Translates to: TWACCHFCCWESQLH*IWHSKTHPSDASTS
Trigger: ACTTGTGGAAGCATCAGAAGGATGTGTTTTTGAGTGCCATATCCAGTGGAGCTGACTCTCCCAACAGCAAAAATGGCAACATGCCCATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp CATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGATTGGGAAACCTAGCTGTTaGAAGGGGATCCAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: HILFNPPQQSEPCSRVKIGKPSC*KGIQSP
Trigger: TGGAGACTGGATCCCCTTCAAACAGCTAGGTTTCCC...AATCTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp CATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGATTGGGCTAAACCTGTTGTaGGTGGACATGGTCACATGC +
Preference number: 5 (lower is better)
Translates to: HILFNPPQQSEPCSRVKIGLNLL*VDMVTC
Trigger: GCATGTGACCATGTCCACCAACAACAGGTTTAGCCC...AATCTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCTGGCCCAAAGGCCACTaGTGTATTTCACCAGCAGGT +
Preference number: 5 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSWPKGH*CISPAG
Trigger: ACCTGCTGGTGAAATACACAAGTGGCCTTTGGGCCA...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp AAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGGGCATGTTGCCATTTTaGCTGTTGGGAGAGTCAGCT +
Preference number: 5 (lower is better)
Translates to: KHILFNPPQQSEPCSRVKGMLPF*LLGESA
Trigger: AGCTGACTCTCCCAACAGCAAAAATGGCAACATGCC...CTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp AAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGATGTGTTCCCCTGGCTTaGATAAGTGGACAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: KHKHILFNPPQQSEPCSRCVPLA*ISGQEV
Trigger: CACCTCCTGTCCACTTATCAAAGCCAGGGGAACACA...TCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp AAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGATTGAGCTGTGACTGCTaGGAAGGGCAGCTTTCGGAA +
Preference number: 5 (lower is better)
Translates to: KHKHILFNPPQQSEPCSRLSCDC*EGQLSE
Trigger: TTCCGAAAGCTGCCCTTCCAAGCAGTCACAGCTCAA...TCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp AAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGCTTCACTCCTGCAAGTaGAGCTGTGACTGCTTGGAA +
Preference number: 5 (lower is better)
Translates to: KHILFNPPQQSEPCSRVKLHSCK*SCDCLE
Trigger: TTCCAAGCAGTCACAGCTCAACTTGCAGGAGTGAAG...CTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS GCA 90 bp GCCTTTGGGCTAAACCTGTTGTTGGTGGACATGGTCACATGCCTTTaGACTGGAATGTCTTTGAATGCTTCATTTCCAAGAGTTGTGTGT +
Preference number: 5 (lower is better)
Translates to: AFGLNLLLVDMVTCL*TGMSLNASFPRVVC
Trigger: ACACACAACTCTTGGAAATGAAGCATTCAAAGACATTCCAGTGCAAAGGCATGTGACCATGTCCACCAACAACAGGTTTAGCCCAAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCCCTTTTAGAACTCCTTaGACGAGCCACAAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSPFRTP*TSHKLS
Trigger: GCTCAGCTTGTGGCTCGTCAAAGGAGTTCTAAAAGG...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp AAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGTTTGGGCTAAACCTGTaGTTGGTGGACATGGTCACA +
Preference number: 5 (lower is better)
Translates to: KHILFNPPQQSEPCSRVKFGLNL*LVDMVT
Trigger: TGTGACCATGTCCACCAACAACAGGTTTAGCCCAAA...CTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp TCTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCAAACGGTGGTGTTTGTTaGGGACCAGGTAGTGGGGAT +
Preference number: 5 (lower is better)
Translates to: SFIKHKHILFNPPQQSEPNGGVC*GPGSGD
Trigger: ATCCCCACTACCTGGTCCCAAACAAACACCACCGTT...TGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp CATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGATTTTGCCATTTTTGCTGTaGGGAGAGTCAGCTCCACTG +
Preference number: 5 (lower is better)
Translates to: HILFNPPQQSEPCSRVKILPFLL*GESAPL
Trigger: CAGTGGAGCTGACTCTCCCAACAGCAAAAATGGCAA...AATCTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp CTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATTCCTCAGACCACTGGTaGCACTTCACTCCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: LSSNISIFFSIPHSSQSHSSDHW*HFTPAS
Trigger: ACTTGCAGGAGTGAAGTGCAACCAGTGGTCTGAGGA...ATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS TCA 90 bp GGAGAGTCAGCTCCACTGGATATGGCACTCAAAAACACATCCTTCTaGTGCTTCCACAAGTCTGCATTTGTAATCTGGCGATTAATACTG +
Preference number: 5 (lower is better)
Translates to: GESAPLDMALKNTSF*CFHKSAFVIWRLIL
Trigger: CAGTATTAATCGCCAGATTACAAATGCAGACTTGTGGAAGCATCAGAAGGATGTGTTTTTGAGTGCCATATCCAGTGGAGCTGACTCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCCAGCTCGTAGCATCTTaGAAACCAGATCTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSQLVAS*KPDLLP
Trigger: TGGAAGGAGATCTGGTTTCAAAGATGCTACGAGCTG...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp TCTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCACAAGCTGAGCAATTCTaGCAGTTTCTGTGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: SFIKHKHILFNPPQQSEPQAEQF*QFLCRP
Trigger: TGGCCTGCACAGAAACTGCAAGAATTGCTCAGCTTG...TGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp AAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGACCAACAGAGTTTCCTTaGTCTCTTAACGGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: KHKHILFNPPQQSEPCSRPTEFP*SLNGAG
Trigger: TCCAGCACCGTTAAGAGACAAAGGAAACTCTGTTGG...TCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp CATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGATTTTGCCCTGCATCCTTTaGGATTTTGTCAGTGGGCAA +
Preference number: 5 (lower is better)
Translates to: HILFNPPQQSEPCSRVKILPCIL*DFVSGQ
Trigger: TTGCCCACTGACAAAATCCAAAAGGATGCAGGGCAA...AATCTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp CTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATAGAAGGTCACTGAGCTaGTTCAGACCCTTACAAGGC +
Preference number: 5 (lower is better)
Translates to: LSSNISIFFSIPHSSQSHRRSLS*FRPLQG
Trigger: GCCTTGTAAGGGTCTGAACAAGCTCAGTGACCTTCT...ATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp CTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATAAATTCTCTCCAGTGTaGCCCGACATGGGCATGTTG +
Preference number: 5 (lower is better)
Translates to: LSSNISIFFSIPHSSQSHKFSPV*PDMGML
Trigger: CAACATGCCCATGTCGGGCAACACTGGAGAGAATTT...ATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp AAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGTCCACCATGGACTTTTaGATGACATCTGTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: KHILFNPPQQSEPCSRVKSTMDF*MTSVRF
Trigger: GAACCTCACAGATGTCATCAAAAAGTCCATGGTGGA...CTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS TCA 90 bp GCAGCTTTCGGAACATGTCCACTAGGGGCTGTACTTTTCTTATGTTaGCTAATTCGTGTTTGCCATAATCCAGCTCATACACAGATACCA +
Preference number: 5 (lower is better)
Translates to: AAFGTCPLGAVLFLC*LIRVCHNPAHTQIP
Trigger: TGGTATCTGTGTATGAGCTGGATTATGGCAAACACGAATTAGTCAACATAAGAAAAGTACAGCCCCTAGTGGACATGTTCCGAAAGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp AAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGACATGGTCACATGCCTTaGCACTGGAATGTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: KHKHILFNPPQQSEPCSRHGHMP*HWNVFE
Trigger: TTCAAAGACATTCCAGTGCAAAGGCATGTGACCATG...TCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCGCATCCTTTTGGATTTaGTCAGTGGGCAATGGAAGT +
Preference number: 5 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSASFWI*SVGNGS
Trigger: ACTTCCATTGCCCACTGACAAAATCCAAAAGGATGC...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp CATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGATTATTATCACCATGTGCTaGCCCTGCATCCTTTTGGAT +
Preference number: 5 (lower is better)
Translates to: HILFNPPQQSEPCSRVKIIITMC*PCILLD
Trigger: ATCCAAAAGGATGCAGGGCAAGCACATGGTGATAAT...AATCTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp AAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGAGTGGAATGTCAGCTTaGTCAAGTATTTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: KHILFNPPQQSEPCSRVKSGMSA*SSISTA
Trigger: TGCAGTGGAAATACTTGACAAAGCTGACATTCCACT...CTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS TCA 90 bp TGTTGTTGGTGGACATGGTCACATGCCTTTGCACTGGAATGTCTTTaGATGCTTCATTTCCAAGAGTTGTGTGTAGCATATAAGGAGACA +
Preference number: 5 (lower is better)
Translates to: CCWWTWSHAFALECL*MLHFQELCVAYKET
Trigger: TGTCTCCTTATATGCTACACACAACTCTTGGAAATGAAGCATTCAAAGACATTCCAGTGCAAAGGCATGTGACCATGTCCACCAACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS TCA 90 bp GTTCCTAACTCTATTTATATAACTACTATTGTCTTTACTCCTTTATaGGCCAGGGCTTACCCCCAGCACTCCATATACTTCCCACCGTAC +
Preference number: 5 (lower is better)
Translates to: VPNSIYITTIVFTPL*ARAYPQHSIYFPPY
Trigger: GTACGGTGGGAAGTATATGGAGTGCTGGGGGTAAGCCCTGGCTCATAAAGGAGTAAAGACAATAGTAGTTATATAAATAGAGTTAGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492428.1
CDS GCA 90 bp CAAATACTCTTGTTCAACCATAGCCTTGATATCATTATCACCATGTaGTTGCCCTGCATCCTTTTGGATTTTGTCAGTGGGCAATGGAAG +
Preference number: 5 (lower is better)
Translates to: QILLFNHSLDIIITM*LPCILLDFVSGQWK
Trigger: CTTCCATTGCCCACTGACAAAATCCAAAAGGATGCAGGGCAAGCACATGGTGATAATGATATCAAGGCTATGGTTGAACAAGAGTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp AAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGTACCTGCAAATACTCTaGTTCAACCATAGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: KHILFNPPQQSEPCSRVKYLQIL*FNHSLD
Trigger: ATCAAGGCTATGGTTGAACAAGAGTATTTGCAGGTA...CTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp AAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGATGGTGATGCTTCAGTaGGAATCATTAAAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: KHILFNPPQQSEPCSRVKMVMLQ*ESLKEE
Trigger: TTCCTCCTTTAATGATTCCAACTGAAGCATCACCAT...CTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp AAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGACAGGTGGCATTGATATaGATATCATCTTCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: KHKHILFNPPQQSEPCSRQVALI*ISSSPE
Trigger: CTCAGGAGAAGATGATATCAATATCAATGCCACCTG...TCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp ATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCTGGCCTGAGGTGGTATaGCAATCATTTCTTGTAGAA +
Preference number: 5 (lower is better)
Translates to: IKHKHILFNPPQQSEPCSWPEVV*QSFLVE
Trigger: TTCTACAAGAAATGATTGCAATACCACCTCAGGCCA...GCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp AAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGACAGATACCAGTCCATaGGTCAGGATTCCTTTTAAA +
Preference number: 5 (lower is better)
Translates to: KHILFNPPQQSEPCSRVKTDTSP*VRIPFK
Trigger: TTTAAAAGGAATCCTGACCAATGGACTGGTATCTGT...CTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS TCA 90 bp TATAGCCTTCAAGCAGGTGGCATTGATATTGATATCATCTTCTCCTaGGGTATCGTACAGAACAACAAGTGGAATGTCAGCTTTGTCAAG +
Preference number: 5 (lower is better)
Translates to: YSLQAGGIDIDIIFS*GIVQNNKWNVSFVK
Trigger: CTTGACAAAGCTGACATTCCACTTGTTGTTCTGTACGATACCTCAGGAGAAGATGATATCAATATCAATGCCACCTGCTTGAAGGCTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS GCA 90 bp TTGTTCAACCATAGCCTTGATATCATTATCACCATGTGCTTGCCCTaGATCCTTTTGGATTTTGTCAGTGGGCAATGGAAGTTTAGCATA +
Preference number: 5 (lower is better)
Translates to: LFNHSLDIIITMCLP*ILLDFVSGQWKFSI
Trigger: TATGCTAAACTTCCATTGCCCACTGACAAAATCCAAAAGGATGCAGGGCAAGCACATGGTGATAATGATATCAAGGCTATGGTTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS GCA 90 bp TACTCTTGTTCAACCATAGCCTTGATATCATTATCACCATGTGCTTaGCCTGCATCCTTTTGGATTTTGTCAGTGGGCAATGGAAGTTTA +
Preference number: 5 (lower is better)
Translates to: YSCSTIALISLSPCA*PASFWILSVGNGSL
Trigger: TAAACTTCCATTGCCCACTGACAAAATCCAAAAGGATGCAGGGCAAGCACATGGTGATAATGATATCAAGGCTATGGTTGAACAAGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp TCTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCACATCTGACAATTAACTaGACGCCCGGTTTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: SFIKHKHILFNPPQQSEPHLTIN*TPGFPF
Trigger: AAAAGGAAAACCGGGCGTCAAGTTAATTGTCAGATG...TGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp CTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATACCACTTCATTTGTGTaGCTCAGTTCAACCACCAAT +
Preference number: 5 (lower is better)
Translates to: LSSNISIFFSIPHSSQSHTTSFV*LSSTTN
Trigger: ATTGGTGGTTGAACTGAGCAACACAAATGAAGTGGT...ATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp CATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATGTAGCAGAGTTAAGATTTGTTCAACCATAGCCTaGATATCATTATCACCATGT +
Preference number: 5 (lower is better)
Translates to: HILFNPPQQSEPCSRVKICSTIA*ISLSPC
Trigger: ACATGGTGATAATGATATCAAGGCTATGGTTGAACA...AATCTTAACTCTGCTACATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp CTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATTCAGGGAATTTCACTTaGTACATTTCCTCAAATGCT +
Preference number: 5 (lower is better)
Translates to: LSSNISIFFSIPHSSQSHSGNFT*YISSNA
Trigger: AGCATTTGAGGAAATGTACAAAGTGAAATTCCCTGA...ATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS-3UTR CAA 90 bp CTTTCATCAAACATAAGCATATTCTTTTCAATCCCCCACAGCAGTCAGAGCCATTTCAAGCAGGTGGCATaGATATTGATATCATCTTCT +
Preference number: 5 (lower is better)
Translates to: LSSNISIFFSIPHSSQSHFKQVA*ILISSS
Trigger: AGAAGATGATATCAATATCAATGCCACCTGCTTGAA...ATGGCTCTGACTGCTGTGGGGGATTGAAAAGAATATGCTTATGTTTGATGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS GCA 72 bp AACCAGGCGTCCTCCTCGGCATTTACGGCCAGCAACTaGCCAACATTCACAGCCTGGACTGGTGTGATCTTA +
Preference number: 6 (lower is better)
Translates to: NQASSSAFTASN*PTFTAWTGVIL
Trigger: TAAGATCACACCAGTCCAGGCTGTGAATGTTGGGCAGTTGCTGGCCGTAAATGCCGAGGAGGACGCCTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS TCA 72 bp GAACTTCCAACTTATGTATCTCCTGCCAAGGCTGGATaGCGAAGTAGCCTGGGTGACAGGCCACAGGCACAT +
Preference number: 6 (lower is better)
Translates to: ELPTYVSPAKAG*RSSLGDRPQAH
Trigger: ATGTGCCTGTGGCCTGTCACCCAGGCTACTTCGTCATCCAGCCTTGGCAGGAGATACATAAGTTGGAAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS TCA 72 bp ACCACTGGTTGCACTTCACTCCTGCAAGTTGAGCTGTaGCTGCTTGGAAGGGCAGCTTTCGGAACATGTCCA +
Preference number: 6 (lower is better)
Translates to: TTGCTSLLQVEL*LLGRAAFGTCP
Trigger: TGGACATGTTCCGAAAGCTGCCCTTCCAAGCAGTCACAGCTCAACTTGCAGGAGTGAAGTGCAACCAGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CCA 72 bp GGAGGTGGCAGTTCCTCTGTGGAGAAAGCGCTCGTATaGTCCACCATGGACTTTTTGATGACATCTGTGAGG +
Preference number: 6 (lower is better)
Translates to: GGGSSSVEKALV*STMDFLMTSVR
Trigger: CCTCACAGATGTCATCAAAAAGTCCATGGTGGACCATACGAGCGCTTTCTCCACAGAGGAACTGCCACCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS TCA 72 bp GTCTGCACCAGTGCCACCAGAGGTTTCTTCTCCACATaGTTTCGAAACACCATAGAAGCCTCCTCAGACCAC +
Preference number: 6 (lower is better)
Translates to: VCTSATRGFFST*FRNTIEASSDH
Trigger: GTGGTCTGAGGAGGCTTCTATGGTGTTTCGAAATCATGTGGAGAAGAAACCTCTGGTGGCACTGGTGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CCA 72 bp GCTTTGATAAGTGGACAGGAGGTGGCAGTTCCTCTGTaGAGAAAGCGCTCGTATGGTCCACCATGGACTTTT +
Preference number: 6 (lower is better)
Translates to: ALISGQEVAVPL*RKRSYGPPWTF
Trigger: AAAAGTCCATGGTGGACCATACGAGCGCTTTCTCCACAGAGGAACTGCCACCTCCTGTCCACTTATCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CAA 72 bp CTGAAATTCTCTCCAGTGTTGCCCGACATGGGCATGTaGCCATTTTTGCTGTTGGGAGAGTCAGCTCCACTG +
Preference number: 6 (lower is better)
Translates to: LKFSPVLPDMGM*PFLLLGESAPL
Trigger: CAGTGGAGCTGACTCTCCCAACAGCAAAAATGGCAACATGCCCATGTCGGGCAACACTGGAGAGAATTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CAA 90 bp ATGCTACTCCATTCTTATGAGACTGCAGAACAGCTCGTAGCATCTTaGAAACCAGATCTCCTTCCAGCATCTTTGCCTCGTTCCGGGGGC +
Preference number: 6 (lower is better)
Translates to: MLLHSYETAEQLVAS*KPDLLPASLPRSGG
Trigger: GCCCCCGGAACGAGGCAAAGATGCTGGAAGGAGATCTGGTTTCAAAGATGCTACGAGCTGTTCTGCAGTCTCATAAGAATGGAGTAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CCA 72 bp TGTTGCCCGACATGGGCATGTTGCCATTTTTGCTGTTaGGAGAGTCAGCTCCACTGGATATGGCACTCAAAA +
Preference number: 6 (lower is better)
Translates to: CCPTWACCHFCC*ESQLHWIWHSK
Trigger: TTTTGAGTGCCATATCCAGTGGAGCTGACTCTCCCAACAGCAAAAATGGCAACATGCCCATGTCGGGCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CAA 90 bp TCTCCTGCCATAACTGTTGGACACCCTTTCAACGGTGGTGTTTGTTaGGGACCAGGTAGTGGGGATAGAGGTACTTTCTCAGTATCCAGT +
Preference number: 6 (lower is better)
Translates to: SPAITVGHPFNGGVC*GPGSGDRGTFSVSS
Trigger: ACTGGATACTGAGAAAGTACCTCTATCCCCACTACCTGGTCCCAAACAAACACCACCGTTGAAAGGGTGTCCAACAGTTATGGCAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CAA 90 bp AGGTTCTTTCTGAAATTCTCTCCAGTGTTGCCCGACATGGGCATGTaGCCATTTTTGCTGTTGGGAGAGTCAGCTCCACTGGATATGGCA +
Preference number: 6 (lower is better)
Translates to: RFFLKFSPVLPDMGM*PFLLLGESAPLDMA
Trigger: TGCCATATCCAGTGGAGCTGACTCTCCCAACAGCAAAAATGGCAACATGCCCATGTCGGGCAACACTGGAGAGAATTTCAGAAAGAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS TCA 72 bp TCTCCTTGGAGCCGGGGTAATGCTACTCCATTCTTATaGGACTGCAGAACAGCTCGTAGCATCTTTGAAACC +
Preference number: 6 (lower is better)
Translates to: SPWSRGNATPFL*DCRTARSIFET
Trigger: GGTTTCAAAGATGCTACGAGCTGTTCTGCAGTCTCATAAGAATGGAGTAGCATTACCCCGGCTCCAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS TCA 72 bp CACTCCATATACTTCCCACCGTACAATACTTCTGCATaGCAGGTGTTGCAGCCCCATTTCACAGATGGGGAA +
Preference number: 6 (lower is better)
Translates to: HSIYFPPYNTSA*QVLQPHFTDGE
Trigger: TTCCCCATCTGTGAAATGGGGCTGCAACACCTGTCATGCAGAAGTATTGTACGGTGGGAAGTATATGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492428.1
CDS CAA 72 bp CAAATGCTTTCGGAAGTGCACTGGCCCAAAGGCCACTaGTGTATTTCACCAGCAGGTCTGCCACTTTTTCTT +
Preference number: 6 (lower is better)
Translates to: QMLSEVHWPKGH*CISPAGLPLFL
Trigger: AAGAAAAAGTGGCAGACCTGCTGGTGAAATACACAAGTGGCCTTTGGGCCAGTGCACTTCCGAAAGCATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CAA 90 bp CATCTGACAATTAACTTGACGCCCGGTTTTCCTTTTAGAACTCCTTaGACGAGCCACAAGCTGAGCAATTCTTGCAGTTTCTGTGCAGGC +
Preference number: 6 (lower is better)
Translates to: HLTINLTPGFPFRTP*TSHKLSNSCSFCAG
Trigger: GCCTGCACAGAAACTGCAAGAATTGCTCAGCTTGTGGCTCGTCAAAGGAGTTCTAAAAGGAAAACCGGGCGTCAAGTTAATTGTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CAA 90 bp CGCCTTTGGGCTAAACCTGTTGTTGGTGGACATGGTCACATGCCTTaGCACTGGAATGTCTTTGAATGCTTCATTTCCAAGAGTTGTGTG +
Preference number: 6 (lower is better)
Translates to: RLWAKPVVGGHGHMP*HWNVFECFISKSCV
Trigger: CACACAACTCTTGGAAATGAAGCATTCAAAGACATTCCAGTGCAAAGGCATGTGACCATGTCCACCAACAACAGGTTTAGCCCAAAGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS TCA 72 bp AATGGAAGTAGTCCTCTATCTTACGTAGAAGGTCACTaGGCTTGTTCAGACCCTTACAAGGCACCTGGCAGT +
Preference number: 6 (lower is better)
Translates to: NGSSPLSYVEGH*ACSDPYKAPGS
Trigger: ACTGCCAGGTGCCTTGTAAGGGTCTGAACAAGCTCAGTGACCTTCTACGTAAGATAGAGGACTACTTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS GCA 72 bp GGCCCAAAGGCCACTTGTGTATTTCACCAGCAGGTCTaGCACTTTTTCTTTAAAGTCTCCTGCCATAACTGT +
Preference number: 6 (lower is better)
Translates to: GPKATCVFHQQV*HFFFKVSCHNC
Trigger: ACAGTTATGGCAGGAGACTTTAAAGAAAAAGTGGCAGACCTGCTGGTGAAATACACAAGTGGCCTTTGGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CCA 72 bp CTTTGTACATTTCCTCAAATGCTTTCGGAAGTGCACTaGCCCAAAGGCCACTTGTGTATTTCACCAGCAGGT +
Preference number: 6 (lower is better)
Translates to: LCTFPQMLSEVH*PKGHLCISPAG
Trigger: ACCTGCTGGTGAAATACACAAGTGGCCTTTGGGCCAGTGCACTTCCGAAAGCATTTGAGGAAATGTACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CAA 72 bp ATAACTGTTGGACACCCTTTCAACGGTGGTGTTTGTTaGGGACCAGGTAGTGGGGATAGAGGTACTTTCTCA +
Preference number: 6 (lower is better)
Translates to: ITVGHPFNGGVC*GPGSGDRGTFS
Trigger: TGAGAAAGTACCTCTATCCCCACTACCTGGTCCCAAACAAACACCACCGTTGAAAGGGTGTCCAACAGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CCA 72 bp TACGGCCAGCAACTGCCCAACATTCACAGCCTGGACTaGTGTGATCTTAGGATTCTTACTGTAATATTCCTT +
Preference number: 6 (lower is better)
Translates to: YGQQLPNIHSLD*CDLRILTVIFL
Trigger: AAGGAATATTACAGTAAGAATCCTAAGATCACACCAGTCCAGGCTGTGAATGTTGGGCAGTTGCTGGCCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CAA 72 bp CATTCTTATGAGACTGCAGAACAGCTCGTAGCATCTTaGAAACCAGATCTCCTTCCAGCATCTTTGCCTCGT +
Preference number: 6 (lower is better)
Translates to: HSYETAEQLVAS*KPDLLPASLPR
Trigger: ACGAGGCAAAGATGCTGGAAGGAGATCTGGTTTCAAAGATGCTACGAGCTGTTCTGCAGTCTCATAAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS GCA 72 bp CATAGCCTTGATATCATTATCACCATGTGCTTGCCCTaGATCCTTTTGGATTTTGTCAGTGGGCAATGGAAG +
Preference number: 6 (lower is better)
Translates to: HSLDIIITMCLP*ILLDFVSGQWK
Trigger: CTTCCATTGCCCACTGACAAAATCCAAAAGGATGCAGGGCAAGCACATGGTGATAATGATATCAAGGCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CAA 72 bp ATTAACTTGACGCCCGGTTTTCCTTTTAGAACTCCTTaGACGAGCCACAAGCTGAGCAATTCTTGCAGTTTC +
Preference number: 6 (lower is better)
Translates to: INLTPGFPFRTP*TSHKLSNSCSF
Trigger: GAAACTGCAAGAATTGCTCAGCTTGTGGCTCGTCAAAGGAGTTCTAAAAGGAAAACCGGGCGTCAAGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CAA 72 bp GTGGAGAAAGCGCTCGTATGGTCCACCATGGACTTTTaGATGACATCTGTGAGGTTCTTTCTGAAATTCTCT +
Preference number: 6 (lower is better)
Translates to: VEKALVWSTMDF*MTSVRFFLKFS
Trigger: AGAGAATTTCAGAAAGAACCTCACAGATGTCATCAAAAAGTCCATGGTGGACCATACGAGCGCTTTCTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CAA 90 bp CATAGCCTTGATATCATTATCACCATGTGCTTGCCCTGCATCCTTTaGGATTTTGTCAGTGGGCAATGGAAGTTTAGCATAGAGAATGGC +
Preference number: 6 (lower is better)
Translates to: HSLDIIITMCLPCIL*DFVSGQWKFSIENG
Trigger: GCCATTCTCTATGCTAAACTTCCATTGCCCACTGACAAAATCCAAAAGGATGCAGGGCAAGCACATGGTGATAATGATATCAAGGCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS TCA 72 bp CAAGCAGGTGGCATTGATATTGATATCATCTTCTCCTaGGGTATCGTACAGAACAACAAGTGGAATGTCAGC +
Preference number: 6 (lower is better)
Translates to: QAGGIDIDIIFS*GIVQNNKWNVS
Trigger: GCTGACATTCCACTTGTTGTTCTGTACGATACCTCAGGAGAAGATGATATCAATATCAATGCCACCTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS GCA 72 bp CTAAACCTGTTGTTGGTGGACATGGTCACATGCCTTTaGACTGGAATGTCTTTGAATGCTTCATTTCCAAGA +
Preference number: 6 (lower is better)
Translates to: LNLLLVDMVTCL*TGMSLNASFPR
Trigger: TCTTGGAAATGAAGCATTCAAAGACATTCCAGTGCAAAGGCATGTGACCATGTCCACCAACAACAGGTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS GCA 72 bp TTTGGGCTAAACCTGTTGTTGGTGGACATGGTCACATaGCTTTGCACTGGAATGTCTTTGAATGCTTCATTT +
Preference number: 6 (lower is better)
Translates to: FGLNLLLVDMVT*LCTGMSLNASF
Trigger: AAATGAAGCATTCAAAGACATTCCAGTGCAAAGGCATGTGACCATGTCCACCAACAACAGGTTTAGCCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS GCA 72 bp TTGTTCAACCATAGCCTTGATATCATTATCACCATGTaGTTGCCCTGCATCCTTTTGGATTTTGTCAGTGGG +
Preference number: 6 (lower is better)
Translates to: LFNHSLDIIITM*LPCILLDFVSG
Trigger: CCCACTGACAAAATCCAAAAGGATGCAGGGCAAGCACATGGTGATAATGATATCAAGGCTATGGTTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CAA 72 bp TTCAACCATAGCCTTGATATCATTATCACCATGTGCTaGCCCTGCATCCTTTTGGATTTTGTCAGTGGGCAA +
Preference number: 6 (lower is better)
Translates to: FNHSLDIIITMC*PCILLDFVSGQ
Trigger: TTGCCCACTGACAAAATCCAAAAGGATGCAGGGCAAGCACATGGTGATAATGATATCAAGGCTATGGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS TCA 72 bp TGGACATGGTCACATGCCTTTGCACTGGAATGTCTTTaGATGCTTCATTTCCAAGAGTTGTGTGTAGCATAT +
Preference number: 6 (lower is better)
Translates to: WTWSHAFALECL*MLHFQELCVAY
Trigger: ATATGCTACACACAACTCTTGGAAATGAAGCATTCAAAGACATTCCAGTGCAAAGGCATGTGACCATGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS TCA 72 bp GGAACATGTCCACTAGGGGCTGTACTTTTCTTATGTTaGCTAATTCGTGTTTGCCATAATCCAGCTCATACA +
Preference number: 6 (lower is better)
Translates to: GTCPLGAVLFLC*LIRVCHNPAHT
Trigger: TGTATGAGCTGGATTATGGCAAACACGAATTAGTCAACATAAGAAAAGTACAGCCCCTAGTGGACATGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS TCA 72 bp TTTGAAAGCTCTATCAGATACTCTGACATAAAATCATaGATCCAGGTATCGGTGTCTGGCAACGATGTGTCC +
Preference number: 6 (lower is better)
Translates to: FESSIRYSDIKS*IQVSVSGNDVS
Trigger: GGACACATCGTTGCCAGACACCGATACCTGGATTCATGATTTTATGTCAGAGTATCTGATAGAGCTTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CCA 72 bp AGACTGTATAAGATACCAAAGTTGCAAAGACAGGGTTaGGACTTTTATCAAGGTCTACCCTCTAGCTCAACT +
Preference number: 6 (lower is better)
Translates to: RLYKIPKLQRQG*DFYQGLPSSST
Trigger: AGTTGAGCTAGAGGGTAGACCTTGATAAAAGTCCCAACCCTGTCTTTGCAACTTTGGTATCTTATACAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492428.1
CDS CAA 72 bp TCAGTTCAACCACCAATACAGATGGTGATGCTTCAGTaGGAATCATTAAAGGAGGAACTGTTATGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: SVQPPIQMVMLQ*ESLKEELLCPP
Trigger: TGGAGGACATAACAGTTCCTCCTTTAATGATTCCAACTGAAGCATCACCATCTGTATTGGTGGTTGAACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CAA 90 bp ATACTCTTGTTCAACCATAGCCTTGATATCATTATCACCATGTGCTaGCCCTGCATCCTTTTGGATTTTGTCAGTGGGCAATGGAAGTTT +
Preference number: 6 (lower is better)
Translates to: ILLFNHSLDIIITMC*PCILLDFVSGQWKF
Trigger: AAACTTCCATTGCCCACTGACAAAATCCAAAAGGATGCAGGGCAAGCACATGGTGATAATGATATCAAGGCTATGGTTGAACAAGAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CAA 90 bp GCAATGCTTTCTTCTACCTGCAAATACTCTTGTTCAACCATAGCCTaGATATCATTATCACCATGTGCTTGCCCTGCATCCTTTTGGATT +
Preference number: 6 (lower is better)
Translates to: AMLSSTCKYSCSTIA*ISLSPCACPASFWI
Trigger: AATCCAAAAGGATGCAGGGCAAGCACATGGTGATAATGATATCAAGGCTATGGTTGAACAAGAGTATTTGCAGGTAGAAGAAAGCATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CAA 90 bp TCTAGTGACTTGTCACATATAGCCTTCAAGCAGGTGGCATTGATATaGATATCATCTTCTCCTGAGGTATCGTACAGAACAACAAGTGGA +
Preference number: 6 (lower is better)
Translates to: SSDLSHIAFKQVALI*ISSSPEVSYRTTSG
Trigger: TCCACTTGTTGTTCTGTACGATACCTCAGGAGAAGATGATATCAATATCAATGCCACCTGCTTGAAGGCTATATGTGACAAGTCACTAGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CAA 72 bp GAGGTATCGTACAGAACAACAAGTGGAATGTCAGCTTaGTCAAGTATTTCCACTGCAAAGATCTTTCCACAA +
Preference number: 6 (lower is better)
Translates to: EVSYRTTSGMSA*SSISTAKIFPQ
Trigger: TTGTGGAAAGATCTTTGCAGTGGAAATACTTGACAAAGCTGACATTCCACTTGTTGTTCTGTACGATACCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS CAA 90 bp TCTTCTCCTGAGGTATCGTACAGAACAACAAGTGGAATGTCAGCTTaGTCAAGTATTTCCACTGCAAAGATCTTTCCACAAGTTAAAGAT +
Preference number: 6 (lower is better)
Translates to: SSPEVSYRTTSGMSA*SSISTAKIFPQVKD
Trigger: ATCTTTAACTTGTGGAAAGATCTTTGCAGTGGAAATACTTGACAAAGCTGACATTCCACTTGTTGTTCTGTACGATACCTCAGGAGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS TCA 72 bp AGGACTTCCAAGCCTGCAAGCTTACATTTTGTAGCTTaGAATGAGAGTGAACAAAACTTCGGGTTTAATTTG +
Preference number: 6 (lower is better)
Translates to: RTSKPASLHFVA*NESEQNFGFNL
Trigger: CAAATTAAACCCGAAGTTTTGTTCACTCTCATTTCAAGCTACAAAATGTAAGCTTGCAGGCTTGGAAGTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355295.5
CDS GCA 72 bp AAATGGACTCAGAAAGACTGTATAAGATACCAAAGTTaGAAAGACAGGGTTGGGACTTTTATCAAGGTCTAC +
Preference number: 6 (lower is better)
Translates to: KWTQKDCIRYQS*KDRVGTFIKVY
Trigger: GTAGACCTTGATAAAAGTCCCAACCCTGTCTTTGCAACTTTGGTATCTTATACAGTCTTTCTGAGTCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492428.1
CDS CAA 72 bp GAAATGGACTCAGAAAGACTGTATAAGATACCAAAGTaGCAAAGACAGGGTTGGGACTTTTATCAAGGTCTA +
Preference number: 6 (lower is better)
Translates to: EMDSERLYKIPK*QRQGWDFYQGL
Trigger: TAGACCTTGATAAAAGTCCCAACCCTGTCTTTGCAACTTTGGTATCTTATACAGTCTTTCTGAGTCCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492428.1
CDS CAA 90 bp GACAGCAAGCAACAACAGCTAATAACGACAATCACAGTTCCTGGTTaGAGCATCTGCTATGTTCCTAACTCTATTTATATAACTACTATT +
Preference number: 6 (lower is better)
Translates to: DSKQQQLITTITVPG*SICYVPNSIYITTI
Trigger: AATAGTAGTTATATAAATAGAGTTAGGAACATAGCAGATGCTCAAACCAGGAACTGTGATTGTCGTTATTAGCTGTTGTTGCTTGCTGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492428.1
CDS CAA 72 bp CAACAACAGCTAATAACGACAATCACAGTTCCTGGTTaGAGCATCTGCTATGTTCCTAACTCTATTTATATA +
Preference number: 6 (lower is better)
Translates to: QQQLITTITVPG*SICYVPNSIYI
Trigger: TATATAAATAGAGTTAGGAACATAGCAGATGCTCAAACCAGGAACTGTGATTGTCGTTATTAGCTGTTGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492428.1