RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TCP11L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000176148

Ensembl transcript IDs: ENST00000334274.9, ENST00000432887.5, ENST00000527661.5, ENST00000528107.5, ENST00000528898.1, ENST00000528962.1, ENST00000530171.5, ENST00000530419.5, ENST00000531632.6, ENST00000532687.5, ENST00000602733.5

Found 429 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGATCCTGCGAATGGGGTCATCGGGACTGGCCACGGCCTGGATCTaGCCCTTGAGCACGGTCTCCTTGTCCGTGGTGAAGGGAGAGGAC +
Preference number: 1 (lower is better)
Translates to: MILRMGSSGLATAWI*PLSTVSLSVVKGED
Trigger: GTCCTCTCCCTTCACCACGGACAAGGAGACCGTGCTCAAGGGCCAGATCCAGGCCGTGGCCAGTCCCGATGACCCCATTCGCAGGATCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR GCA 90 bp CTTGAGTTTCTCAGCAAAGTCGGCCTGGCTGGAAATTCCTGGCGCTaGCATGCTGAAGGTGACCAGCAACACAGCCCCCAGGATGGTCAG +
Preference number: 1 (lower is better)
Translates to: LEFLSKVGLAGNSWR*HAEGDQQHSPQDGQ
Trigger: CTGACCATCCTGGGGGCTGTGTTGCTGGTCACCTTCAGCATGGCAGCGCCAGGAATTTCCAGCCAGGCCGACTTTGCTGAGAAACTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR CCA 90 bp ACCAGCAACACAGCCCCCAGGATGGTCAGTTGTTCCAGCTGCAACTaGAGCTCGTGGAAGCGAGACTGGTCCATTAAAACTGTTTCGGGG +
Preference number: 1 (lower is better)
Translates to: TSNTAPRMVSCSSCN*SSWKRDWSIKTVSG
Trigger: CCCCGAAACAGTTTTAATGGACCAGTCTCGCTTCCACGAGCTCCAGTTGCAGCTGGAACAACTGACCATCCTGGGGGCTGTGTTGCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR CCA 90 bp AATCATCTTGAGTTTCTCAGCAAAGTCGGCCTGGCTGGAAATTCCTaGCGCTGCCATGCTGAAGGTGACCAGCAACACAGCCCCCAGGAT +
Preference number: 1 (lower is better)
Translates to: NHLEFLSKVGLAGNS*RCHAEGDQQHSPQD
Trigger: ATCCTGGGGGCTGTGTTGCTGGTCACCTTCAGCATGGCAGCGCCAGGAATTTCCAGCCAGGCCGACTTTGCTGAGAAACTCAAGATGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR GCA 90 bp AAGGTGACCAGCAACACAGCCCCCAGGATGGTCAGTTGTTCCAGCTaGAACTGGAGCTCGTGGAAGCGAGACTGGTCCATTAAAACTGTT +
Preference number: 1 (lower is better)
Translates to: KVTSNTAPRMVSCSS*NWSSWKRDWSIKTV
Trigger: AACAGTTTTAATGGACCAGTCTCGCTTCCACGAGCTCCAGTTGCAGCTGGAACAACTGACCATCCTGGGGGCTGTGTTGCTGGTCACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR CCA 90 bp AGCAAAATCTTCACAATCATCTTGAGTTTCTCAGCAAAGTCGGCCTaGCTGGAAATTCCTGGCGCTGCCATGCTGAAGGTGACCAGCAAC +
Preference number: 1 (lower is better)
Translates to: SKIFTIILSFSAKSA*LEIPGAAMLKVTSN
Trigger: GTTGCTGGTCACCTTCAGCATGGCAGCGCCAGGAATTTCCAGCCAGGCCGACTTTGCTGAGAAACTCAAGATGATTGTGAAGATTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR TCA 90 bp AGGAGGGCAGGTGCATATCTGTTAGCAAAATCTTCACAATCATCTTaGGTTTCTCAGCAAAGTCGGCCTGGCTGGAAATTCCTGGCGCTG +
Preference number: 1 (lower is better)
Translates to: RRAGAYLLAKSSQSS*VSQQSRPGWKFLAL
Trigger: CAGCGCCAGGAATTTCCAGCCAGGCCGACTTTGCTGAGAAACTCAAGATGATTGTGAAGATTTTGCTAACAGATATGCACCTGCCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR GCA 90 bp AATTCTGCCAGCTTGGAAATGTCTAGCGCCCCATTCTCTGCTTCCTaGTTTATCAGATCCAGATCCAAGACTTCTGTTATCTGGTTTCTC +
Preference number: 1 (lower is better)
Translates to: NSASLEMSSAPFSAS*FIRSRSKTSVIWFL
Trigger: GAGAAACCAGATAACAGAAGTCTTGGATCTGGATCTGATAAAGCAGGAAGCAGAGAATGGGGCGCTAGACATTTCCAAGCTGGCAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR TCA 90 bp TTGCCTCTCCAAAATCTCTTGAAACTTCTTCCTTTCGTATTCAACTaGCTGCTGCATGAGATGAGGCCTGATGCTACTGATAGCAAAGTT +
Preference number: 1 (lower is better)
Translates to: LPLQNLLKLLPFVFN*LLHEMRPDATDSKV
Trigger: AACTTTGCTATCAGTAGCATCAGGCCTCATCTCATGCAGCAGTCAGTTGAATACGAAAGGAAGAAGTTTCAAGAGATTTTGGAGAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR CCA 90 bp AAAGATAAGAGAGTCTCTTTGATTTCTCCTACAAGTTTGATAGCATaGTCATATGCTGGGGGATCTTCACTTAGCTGCACACTCAAGCAA +
Preference number: 1 (lower is better)
Translates to: KDKRVSLISPTSLIA*SYAGGSSLSCTLKQ
Trigger: TTGCTTGAGTGTGCAGCTAAGTGAAGATCCCCCAGCATATGACCATGCTATCAAACTTGTAGGAGAAATCAAAGAGACTCTCTTATCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR CAA 90 bp CTGCGAATGGGGTCATCGGGACTGGCCACGGCCTGGATCTGGCCCTaGAGCACGGTCTCCTTGTCCGTGGTGAAGGGAGAGGACCCACAC +
Preference number: 2 (lower is better)
Translates to: LRMGSSGLATAWIWP*STVSLSVVKGEDPH
Trigger: GTGTGGGTCCTCTCCCTTCACCACGGACAAGGAGACCGTGCTCAAGGGCCAGATCCAGGCCGTGGCCAGTCCCGATGACCCCATTCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR CAA 90 bp TGCCATGCTGAAGGTGACCAGCAACACAGCCCCCAGGATGGTCAGTaGTTCCAGCTGCAACTGGAGCTCGTGGAAGCGAGACTGGTCCAT +
Preference number: 2 (lower is better)
Translates to: CHAEGDQQHSPQDGQ*FQLQLELVEARLVH
Trigger: ATGGACCAGTCTCGCTTCCACGAGCTCCAGTTGCAGCTGGAACAACTGACCATCCTGGGGGCTGTGTTGCTGGTCACCTTCAGCATGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR-3UTR CCA 90 bp CTAGTGAGTAATACTGCTGCTGTAGGGTGCATACACGTTAGGATCGGACGAGGAAGGGACTGTGGGCAATaGCTTCTGATGACCCGAGGC +
Preference number: 2 (lower is better)
Translates to: LVSNTAAVGCIHVRIGRGRDCGQ*LLMTRG
Trigger: GCCTCGGGTCATCAGAAGCCATTGCCCACAGTCCCT...TCCTCGTCCGATCCTAACGTGTATGCACCCTACAGCAGCAGTATTACTCACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR-3UTR TCA 90 bp CAGGGACTGTGGGCAATGGCTTCTGATGACCCGAGGCAAGGTAGGTTTCTAAGAGGATTCGAGATTCCATaGTCCTGCGAATGGGGTCAT +
Preference number: 2 (lower is better)
Translates to: QGLWAMASDDPRQGRFLRGFEIP*SCEWGH
Trigger: ATGACCCCATTCGCAGGATCATGGAATCTCGAATCC...TCTTAGAAACCTACCTTGCCTCGGGTCATCAGAAGCCATTGCCCACAGTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR-3UTR TCA 90 bp CAGGATTGCATCGTAGTAGGGACAGAAGACCATCTTGTTATAGTTGACCAGGCGTCCTCCAGCTCTCTCTaGACTGGACTGAGTCCCCCA +
Preference number: 2 (lower is better)
Translates to: QDCIVVGTEDHLVIVDQASSSSL*TGLSPP
Trigger: TGGGGGACTCAGTCCAGTTCAGAGAGAGCTGGAGGA...CGCCTGGTCAACTATAACAAGATGGTCTTCTGTCCCTACTACGATGCAATCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR-3UTR CCA 90 bp GTCCCACTTCAGAAGCTTCAGGTAAGCGTAATTCTGGACAGCAACAGGGCTCAGGCTTCTTCCAGCCACTaGGTGACAAAGTCCAGGGAA +
Preference number: 2 (lower is better)
Translates to: VPLQKLQVSVILDSNRAQASSSH*VTKSRE
Trigger: TTCCCTGGACTTTGTCACCCAGTGGCTGGAAGAAGC...CTGAGCCCTGTTGCTGTCCAGAATTACGCTTACCTGAAGCTTCTGAAGTGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR-3UTR CCA 90 bp CTAGTGAGTAATACTGCTGCTGTAGGGTGCATACACGTTAGGATCGGACGAGGATCAGCAAAGTCGGCCTaGCTGGAAATTCCTGGCGCT +
Preference number: 2 (lower is better)
Translates to: LVSNTAAVGCIHVRIGRGSAKSA*LEIPGA
Trigger: AGCGCCAGGAATTTCCAGCCAGGCCGACTTTGCTGA...TCCTCGTCCGATCCTAACGTGTATGCACCCTACAGCAGCAGTATTACTCACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR-3UTR TCA 90 bp ATTAAAACTGTTTCGGGGAACGGCCTCTGGAGGTGGTCCCACTTCAGAAGCTTCGACTGCTGCATGAGATaGGGCCTGATGCTACTGATA +
Preference number: 2 (lower is better)
Translates to: IKTVSGNGLWRWSHFRSFDCCMR*GLMLLI
Trigger: TATCAGTAGCATCAGGCCTCATCTCATGCAGCAGTC...GAAGCTTCTGAAGTGGGACCACCTCCAGAGGCCGTTCCCCGAAACAGTTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR-3UTR TCA 90 bp GTCCCACTTCAGAAGCTTCAGGTAAGCGTAATTCTGGACAGCAACAGGGCTCAGCCTTTCGTATTCAACTaGCTGCTGCATGAGATGAGG +
Preference number: 2 (lower is better)
Translates to: VPLQKLQVSVILDSNRAQPFVFN*LLHEMR
Trigger: CCTCATCTCATGCAGCAGTCAGTTGAATACGAAAGG...CTGAGCCCTGTTGCTGTCCAGAATTACGCTTACCTGAAGCTTCTGAAGTGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR-3UTR TCA 90 bp ATACACGTTAGGATCGGACGAGGATCTTACTCAGGATTGCATCGTAGTAGGGACCTTCCAGCCACTGGGTaGCAAAGTCCAGGGAATTTG +
Preference number: 2 (lower is better)
Translates to: IHVRIGRGSYSGLHRSRDLPATG*QSPGNL
Trigger: CAAATTCCCTGGACTTTGTCACCCAGTGGCTGGAAG...GTCCCTACTACGATGCAATCCTGAGTAAGATCCTCGTCCGATCCTAACGTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR CAA 90 bp GGTGCACACAGTGTCCCCATCATGCCAATAATGAATTCTGCCAGCTaGGAAATGTCTAGCGCCCCATTCTCTGCTTCCTGCTTTATCAGA +
Preference number: 2 (lower is better)
Translates to: GAHSVPIMPIMNSAS*EMSSAPFSASCFIR
Trigger: TCTGATAAAGCAGGAAGCAGAGAATGGGGCGCTAGACATTTCCAAGCTGGCAGAATTCATTATTGGCATGATGGGGACACTGTGTGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR-3UTR TCA 90 bp CAGGGACTGTGGGCAATGGCTTCTGATGACCCGAGGCAAGGTAGGTTTCTAAGATCTTCACAATCATCTTaGGTTTCTCAGCAAAGTCGG +
Preference number: 2 (lower is better)
Translates to: QGLWAMASDDPRQGRFLRSSQSS*VSQQSR
Trigger: CCGACTTTGCTGAGAAACTCAAGATGATTGTGAAGA...TCTTAGAAACCTACCTTGCCTCGGGTCATCAGAAGCCATTGCCCACAGTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR-3UTR GCA 90 bp ACTCAGGATTGCATCGTAGTAGGGACAGAAGACCATCTTGTTATAGTTGACCAGGGAAATTCCTGGCGCTaGCATGCTGAAGGTGACCAG +
Preference number: 2 (lower is better)
Translates to: TQDCIVVGTEDHLVIVDQGNSWR*HAEGDQ
Trigger: CTGGTCACCTTCAGCATGGCAGCGCCAGGAATTTCC...CTGGTCAACTATAACAAGATGGTCTTCTGTCCCTACTACGATGCAATCCTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR CAA 90 bp AAGGAGGGCAGGTGCATATCTGTTAGCAAAATCTTCACAATCATCTaGAGTTTCTCAGCAAAGTCGGCCTGGCTGGAAATTCCTGGCGCT +
Preference number: 2 (lower is better)
Translates to: KEGRCISVSKIFTII*SFSAKSAWLEIPGA
Trigger: AGCGCCAGGAATTTCCAGCCAGGCCGACTTTGCTGAGAAACTCAAGATGATTGTGAAGATTTTGCTAACAGATATGCACCTGCCCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR-3UTR CCA 90 bp CCACTTCAGAAGCTTCAGGTAAGCGTAATTCTGGACAGCAACAGGGCTCAGCCTACAAGTTTGATAGCATaGTCATATGCTGGGGGATCT +
Preference number: 2 (lower is better)
Translates to: PLQKLQVSVILDSNRAQPTSLIA*SYAGGS
Trigger: AGATCCCCCAGCATATGACCATGCTATCAAACTTGT...AGGCTGAGCCCTGTTGCTGTCCAGAATTACGCTTACCTGAAGCTTCTGAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR-3UTR TCA 90 bp TCTGATGACCCGAGGCAAGGTAGGTTTCTAAGAAGGTCAGGATTCGAGATTCCAGCGTGTTTATACTTCTaGGTCATAAGGTCCTCTGAG +
Preference number: 2 (lower is better)
Translates to: SDDPRQGRFLRRSGFEIPACLYF*VIRSSE
Trigger: CTCAGAGGACCTTATGACTCAGAAGTATAAACACGC...TGGAATCTCGAATCCTGACCTTCTTAGAAACCTACCTTGCCTCGGGTCATCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR-3UTR CCA 90 bp TCAAAGACTTTCCTTTCACTAGATCTCATAAGTCATAACTGCTCTCAACCAGATGGTCTCTTTTGCGCTTaGATGGCCGTCAGCTCAGCA +
Preference number: 2 (lower is better)
Translates to: SKTFLSLDLISHNCSQPDGLFCA*MAVSSA
Trigger: TGCTGAGCTGACGGCCATCCAAGCGCAAAAGAGACC...ATCTGGTTGAGAGCAGTTATGACTTATGAGATCTAGTGAAAGGAAAGTCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
3UTR-3UTR TCA 90 bp CTTACTCAGGATTGCATCGTAGTAGGGACAGAAGACCATCTTGTTATAGTTGACTTTCTCAGTCTAGTATaGCCAGGCAGCAAGAAAGAT +
Preference number: 2 (lower is better)
Translates to: LTQDCIVVGTEDHLVIVDFLSLV*PGSKKD
Trigger: ATCTTTCTTGCTGCCTGGTCATACTAGACTGAGAAA...GTCAACTATAACAAGATGGTCTTCTGTCCCTACTACGATGCAATCCTGAGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR-3UTR GCA 90 bp GACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATGGATCTTCACTTAGCTaGACACTCAAGCAATCCCAA +
Preference number: 2 (lower is better)
Translates to: DMYYIAIFQCNIRVQNRYGSSLS*TLKQSQ
Trigger: TTGGGATTGCTTGAGTGTGCAGCTAAGTGAAGATCC...ATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR-3UTR CCA 90 bp CAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTAGAACAGGTATTCTGTaGCTAGTGAGTAATACTGCT +
Preference number: 2 (lower is better)
Translates to: QQVFSTVIHNILPFGIGARTGIL*LVSNTA
Trigger: AGCAGTATTACTCACTAGCCACAGAATACCTGTTCT...AGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
3UTR-3UTR GCA 90 bp TTCAATCATCACATCTGTGTATTGTCTCAGGGTCAATTTTTCAGTAAGAATTCCCTCATAAGTCATAACTaGTCTCAACCAGATGCAGGA +
Preference number: 2 (lower is better)
Translates to: FNHHICVLSQGQFFSKNSLISHN*SQPDAG
Trigger: TCCTGCATCTGGTTGAGAGCAGTTATGACTTATGAG...GGAATTCTTACTGAAAAATTGACCCTGAGACAATACACAGATGTGATGATTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
3UTR-3UTR CCA 90 bp TTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGAGAACAGGTATTCTGTaGCTAGTGAGTAATACTGCT +
Preference number: 2 (lower is better)
Translates to: FSTSLFNSDTQYSSLWNRRTGIL*LVSNTA
Trigger: AGCAGTATTACTCACTAGCCACAGAATACCTGTTCT...CCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
3UTR-3UTR CCA 90 bp TCAAAGACTTTCCTTTCACTAGATCTCATAAGTCATAACTGCTCTCAACCAGATAGAACAGGTATTCTGTaGCTAGTGAGTAATACTGCT +
Preference number: 2 (lower is better)
Translates to: SKTFLSLDLISHNCSQPDRTGIL*LVSNTA
Trigger: AGCAGTATTACTCACTAGCCACAGAATACCTGTTCT...ATCTGGTTGAGAGCAGTTATGACTTATGAGATCTAGTGAAAGGAAAGTCTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
3UTR-3UTR CCA 90 bp GAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAACATAGAACAGGTATTCTGTaGCTAGTGAGTAATACTGCT +
Preference number: 2 (lower is better)
Translates to: ESVLLNRHVLYSHFPMQHRTGIL*LVSNTA
Trigger: AGCAGTATTACTCACTAGCCACAGAATACCTGTTCT...ATGTTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
3UTR CCA 72 bp CGAATGGGGTCATCGGGACTGGCCACGGCCTGGATCTaGCCCTTGAGCACGGTCTCCTTGTCCGTGGTGAAG +
Preference number: 3 (lower is better)
Translates to: RMGSSGLATAWI*PLSTVSLSVVK
Trigger: CTTCACCACGGACAAGGAGACCGTGCTCAAGGGCCAGATCCAGGCCGTGGCCAGTCCCGATGACCCCATTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR GCA 72 bp CTCAGCAAAGTCGGCCTGGCTGGAAATTCCTGGCGCTaGCATGCTGAAGGTGACCAGCAACACAGCCCCCAG +
Preference number: 3 (lower is better)
Translates to: LSKVGLAGNSWR*HAEGDQQHSPQ
Trigger: CTGGGGGCTGTGTTGCTGGTCACCTTCAGCATGGCAGCGCCAGGAATTTCCAGCCAGGCCGACTTTGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR CCA 72 bp ACAAGGCTGTCTGAGGGAGGGCAGGAGGTGAGGCCATaGCTTGGTCTCTTTTGCGCTTGGATGGCCGTCAGC +
Preference number: 3 (lower is better)
Translates to: TRLSEGGQEVRP*LGLFCAWMAVS
Trigger: GCTGACGGCCATCCAAGCGCAAAAGAGACCAAGCCATGGCCTCACCTCCTGCCCTCCCTCAGACAGCCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
3UTR GCA 72 bp AGCAACACAGCCCCCAGGATGGTCAGTTGTTCCAGCTaGAACTGGAGCTCGTGGAAGCGAGACTGGTCCATT +
Preference number: 3 (lower is better)
Translates to: SNTAPRMVSCSS*NWSSWKRDWSI
Trigger: AATGGACCAGTCTCGCTTCCACGAGCTCCAGTTGCAGCTGGAACAACTGACCATCCTGGGGGCTGTGTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR CCA 72 bp GAGTTTCTCAGCAAAGTCGGCCTGGCTGGAAATTCCTaGCGCTGCCATGCTGAAGGTGACCAGCAACACAGC +
Preference number: 3 (lower is better)
Translates to: EFLSKVGLAGNS*RCHAEGDQQHS
Trigger: GCTGTGTTGCTGGTCACCTTCAGCATGGCAGCGCCAGGAATTTCCAGCCAGGCCGACTTTGCTGAGAAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR CCA 72 bp TACCCAGATTGCAGAAGAGAGAGGTCCCAGCCTCCTTaGAAGGACATGATGGGGGAGGAGTGGAGACAACAG +
Preference number: 3 (lower is better)
Translates to: YPDCRRERSQPP*KDMMGEEWRQQ
Trigger: CTGTTGTCTCCACTCCTCCCCCATCATGTCCTTCCAAGGAGGCTGGGACCTCTCTCTTCTGCAATCTGGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
3UTR CCA 72 bp TGTTCCAGCTGCAACTGGAGCTCGTGGAAGCGAGACTaGTCCATTAAAACTGTTTCGGGGAACGGCCTCTGG +
Preference number: 3 (lower is better)
Translates to: CSSCNWSSWKRD*SIKTVSGNGLW
Trigger: CCAGAGGCCGTTCCCCGAAACAGTTTTAATGGACCAGTCTCGCTTCCACGAGCTCCAGTTGCAGCTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR CCA 72 bp ACAGCCCCCAGGATGGTCAGTTGTTCCAGCTGCAACTaGAGCTCGTGGAAGCGAGACTGGTCCATTAAAACT +
Preference number: 3 (lower is better)
Translates to: TAPRMVSCSSCN*SSWKRDWSIKT
Trigger: AGTTTTAATGGACCAGTCTCGCTTCCACGAGCTCCAGTTGCAGCTGGAACAACTGACCATCCTGGGGGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR CCA 72 bp AGGATGGTCAGTTGTTCCAGCTGCAACTGGAGCTCGTaGAAGCGAGACTGGTCCATTAAAACTGTTTCGGGG +
Preference number: 3 (lower is better)
Translates to: RMVSCSSCNWSS*KRDWSIKTVSG
Trigger: CCCCGAAACAGTTTTAATGGACCAGTCTCGCTTCCACGAGCTCCAGTTGCAGCTGGAACAACTGACCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR-3UTR CAA 90 bp CCACTTCAGAAGCTTCAGGTAAGCGTAATTCTGGACAGCAACAGGGCTCAGCCTATGAATTCTGCCAGCTaGGAAATGTCTAGCGCCCCA +
Preference number: 3 (lower is better)
Translates to: PLQKLQVSVILDSNRAQPMNSAS*EMSSAP
Trigger: TGGGGCGCTAGACATTTCCAAGCTGGCAGAATTCAT...AGGCTGAGCCCTGTTGCTGTCCAGAATTACGCTTACCTGAAGCTTCTGAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR CCA 72 bp TTCACAATCATCTTGAGTTTCTCAGCAAAGTCGGCCTaGCTGGAAATTCCTGGCGCTGCCATGCTGAAGGTG +
Preference number: 3 (lower is better)
Translates to: FTIILSFSAKSA*LEIPGAAMLKV
Trigger: CACCTTCAGCATGGCAGCGCCAGGAATTTCCAGCCAGGCCGACTTTGCTGAGAAACTCAAGATGATTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR-3UTR CAA 90 bp CTTACTCAGGATTGCATCGTAGTAGGGACAGAAGACCATCTTGTTATAGTTGACTTGAGCACGGTCTCCTaGTCCGTGGTGAAGGGAGAG +
Preference number: 3 (lower is better)
Translates to: LTQDCIVVGTEDHLVIVDLSTVS*SVVKGE
Trigger: CTCTCCCTTCACCACGGACAAGGAGACCGTGCTCAA...GTCAACTATAACAAGATGGTCTTCTGTCCCTACTACGATGCAATCCTGAGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR-3UTR CAA 90 bp TCAAAGACTTTCCTTTCACTAGATCTCATAAGTCATAACTGCTCTCAACCAGATTGGTCTCTTTTGCGCTaGGATGGCCGTCAGCTCAGC +
Preference number: 3 (lower is better)
Translates to: SKTFLSLDLISHNCSQPDWSLLR*DGRQLS
Trigger: GCTGAGCTGACGGCCATCCAAGCGCAAAAGAGACCA...ATCTGGTTGAGAGCAGTTATGACTTATGAGATCTAGTGAAAGGAAAGTCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
3UTR TCA 72 bp TCCGAAGAGTTTATCAACGAGGTTGTGTTAATCCGATaGTCAACATTGAACAGCTCTGGAGAGACAAGGCCG +
Preference number: 3 (lower is better)
Translates to: SEEFINEVVLIR*STLNSSGETRP
Trigger: CGGCCTTGTCTCTCCAGAGCTGTTCAATGTTGATCATCGGATTAACACAACCTCGTTGATAAACTCTTCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527661.5
3UTR GCA 72 bp AGCTTGGAAATGTCTAGCGCCCCATTCTCTGCTTCCTaGTTTATCAGATCCAGATCCAAGACTTCTGTTATC +
Preference number: 3 (lower is better)
Translates to: SLEMSSAPFSAS*FIRSRSKTSVI
Trigger: GATAACAGAAGTCTTGGATCTGGATCTGATAAAGCAGGAAGCAGAGAATGGGGCGCTAGACATTTCCAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR-3UTR CAA 90 bp TCAGTTGTTCCAGCTGCAACTGGAGCTCGTGGAAGCGAGACTGGTCCATTAAAAATTTCTCCTACAAGTTaGATAGCATGGTCATATGCT +
Preference number: 3 (lower is better)
Translates to: SVVPAATGARGSETGPLKISPTS*IAWSYA
Trigger: AGCATATGACCATGCTATCAAACTTGTAGGAGAAAT...TTTTAATGGACCAGTCTCGCTTCCACGAGCTCCAGTTGCAGCTGGAACAACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR GCA 72 bp TACACGTTAGGATCGGACGAGGATCTTACTCAGGATTaGATCGTAGTAGGGACAGAAGACCATCTTGTTATA +
Preference number: 3 (lower is better)
Translates to: YTLGSDEDLTQD*IVVGTEDHLVI
Trigger: TATAACAAGATGGTCTTCTGTCCCTACTACGATGCAATCCTGAGTAAGATCCTCGTCCGATCCTAACGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR TCA 72 bp GGTGCATATCTGTTAGCAAAATCTTCACAATCATCTTaGGTTTCTCAGCAAAGTCGGCCTGGCTGGAAATTC +
Preference number: 3 (lower is better)
Translates to: GAYLLAKSSQSS*VSQQSRPGWKF
Trigger: GAATTTCCAGCCAGGCCGACTTTGCTGAGAAACTCAAGATGATTGTGAAGATTTTGCTAACAGATATGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR CCA 72 bp TCCAATGCAACATTAGAGTACAGAACAGGTATTCTGTaGCTAGTGAGTAATACTGCTGCTGTAGGGTGCATA +
Preference number: 3 (lower is better)
Translates to: SNATLEYRTGIL*LVSNTAAVGCI
Trigger: TATGCACCCTACAGCAGCAGTATTACTCACTAGCCACAGAATACCTGTTCTGTACTCTAATGTTGCATTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
3UTR TCA 72 bp CAAAATCTCTTGAAACTTCTTCCTTTCGTATTCAACTaGCTGCTGCATGAGATGAGGCCTGATGCTACTGAT +
Preference number: 3 (lower is better)
Translates to: QNLLKLLPFVFN*LLHEMRPDATD
Trigger: ATCAGTAGCATCAGGCCTCATCTCATGCAGCAGTCAGTTGAATACGAAAGGAAGAAGTTTCAAGAGATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR-3UTR CAA 90 bp TTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAACTACTGATAGCAAAGTaGGCCATGTCCACTTTCATT +
Preference number: 3 (lower is better)
Translates to: LESVLLNRHVLYSHFPMQLLIAK*AMSTFI
Trigger: AATGAAAGTGGACATGGCCAACTTTGCTATCAGTAG...TTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR CAA 72 bp GCCACGGCCTGGATCTGGCCCTTGAGCACGGTCTCCTaGTCCGTGGTGAAGGGAGAGGACCCACACAGGGAG +
Preference number: 4 (lower is better)
Translates to: ATAWIWPLSTVS*SVVKGEDPHRE
Trigger: CTCCCTGTGTGGGTCCTCTCCCTTCACCACGGACAAGGAGACCGTGCTCAAGGGCCAGATCCAGGCCGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR CAA 72 bp GGGTCATCGGGACTGGCCACGGCCTGGATCTGGCCCTaGAGCACGGTCTCCTTGTCCGTGGTGAAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GSSGLATAWIWP*STVSLSVVKGE
Trigger: CTCTCCCTTCACCACGGACAAGGAGACCGTGCTCAAGGGCCAGATCCAGGCCGTGGCCAGTCCCGATGACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR GCA 90 bp GATTCGAGATTCCATGATCCTGCGAATGGGGTCATCGGGACTGGCCACGGCCTGCGCCTCTTCCTCGCCTaGCCCCGACATCCCGGGATG +
Preference number: 4 (lower is better)
Translates to: DSRFHDPANGVIGTGHGLRLFLA*PRHPGM
Trigger: CATCCCGGGATGTCGGGGGCAGGCGAGGAAGAGGCG...CAGGCCGTGGCCAGTCCCGATGACCCCATTCGCAGGATCATGGAATCTCGAATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CCA 90 bp GATTCGAGATTCCATGATCCTGCGAATGGGGTCATCGGGACTGGCCACGGCCTGGCCACGGCCTGGATCTaGCCCTTGAGCACGGTCTCC +
Preference number: 4 (lower is better)
Translates to: DSRFHDPANGVIGTGHGLATAWI*PLSTVS
Trigger: GGAGACCGTGCTCAAGGGCCAGATCCAGGCCGTGGC...CAGGCCGTGGCCAGTCCCGATGACCCCATTCGCAGGATCATGGAATCTCGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR TCA 90 bp AGGCAGCTGCTCACCTCCAGGCACACCTTCTCCCCGATGGTAGTGAGGACGTCCTCTCCTTGTCCGTGGTaGAGGGAGAGGACCCACACA +
Preference number: 4 (lower is better)
Translates to: RQLLTSRHTFSPMVVRTSSPCPW*RERTHT
Trigger: TGTGTGGGTCCTCTCCCTTCACCACGGACAAGGAGA...GGACGTCCTCACTACCATCGGGGAGAAGGTGTGCCTGGAGGTGAGCAGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR TCA 90 bp GTCTCTTTTGCGCTTGGATGGCCGTCAGCTCAGCATGAGGCATCTGAAAGAACTCCCCTCCTCTGGCACTaGGCTCCACTCGCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: VSFALGWPSAQHEASERTPLLWH*APLAPG
Trigger: GCCGGGCGCGAGTGGAGCTCAGTGCCAGAGGAGGGG...AGTTCTTTCAGATGCCTCATGCTGAGCTGACGGCCATCCAAGCGCAAAAGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432887.5
CDS-3UTR GCA 90 bp TTGAACAGCTCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGCGGAAGCCGGAGGGATaGGCGGCAGGCAGGGGCGGT +
Preference number: 4 (lower is better)
Translates to: LNSSGETRPSKGPTRIQMRKPEG*AAGRGG
Trigger: ACCGCCCCTGCCTGCCGCGCATCCCTCCGGCTTCCG...CATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGAGCTGTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp TTGAACAGCTCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGCCAGCCCGACTCGGGTaGGCAGCGGTCAGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: LNSSGETRPSKGPTRIQMPARLG*AAVRAA
Trigger: GGCCGCTCTGACCGCTGCCCACCCGAGTCGGGCTGG...CATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGAGCTGTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp CATGGCTTGGTCTCTTTTGCGCTTGGATGGCCGTCAGCTCAGCATGAGGCATCTAGGGCTTGGGAGCCCTaGCTAGGCCAGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: HGLVSFALGWPSAQHEASRAWEP*LGQAGR
Trigger: CCTCCCTGCCTGGCCTAGCCAGGGCTCCCAAGCCCT...AGATGCCTCATGCTGAGCTGACGGCCATCCAAGCGCAAAAGAGACCAAGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR TCA 90 bp TCAGTTGTTCCAGCTGCAACTGGAGCTCGTGGAAGCGAGACTGGTCCATTAAAACCCCTCCTCTGGCACTaGGCTCCACTCGCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SVVPAATGARGSETGPLKPLLWH*APLAPG
Trigger: GCCGGGCGCGAGTGGAGCTCAGTGCCAGAGGAGGGG...TTTTAATGGACCAGTCTCGCTTCCACGAGCTCCAGTTGCAGCTGGAACAACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR GCA 90 bp GGATGGCCGTCAGCTCAGCATGAGGCATCTGAAAGAACTACCCAGATTGCAGAAGGGCGGTTCAGCCTCTaGCCCTCCGAGGCCGCATCC +
Preference number: 4 (lower is better)
Translates to: GWPSAQHEASERTTQIAEGRFSL*PSEAAS
Trigger: GGATGCGGCCTCGGAGGGGCAGAGGCTGAACCGCCC...TTCTGCAATCTGGGTAGTTCTTTCAGATGCCTCATGCTGAGCTGACGGCCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334274.9
CDS-3UTR CCA 90 bp CATGGCTTGGTCTCTTTTGCGCTTGGATGGCCGTCAGCTCAGCATGAGGCATCTTGGGGTCATCGGGACTaGCCACGGCCTGGATCTGGC +
Preference number: 4 (lower is better)
Translates to: HGLVSFALGWPSAQHEASWGHRD*PRPGSG
Trigger: GCCAGATCCAGGCCGTGGCCAGTCCCGATGACCCCA...AGATGCCTCATGCTGAGCTGACGGCCATCCAAGCGCAAAAGAGACCAAGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp GTCCCACTTCAGAAGCTTCAGGTAAGCGTAATTCTGGACAGCAACAGGGCTCAGGAGATGCCTGCGACTTaGACCGCGCGCCTCCCGGAC +
Preference number: 4 (lower is better)
Translates to: VPLQKLQVSVILDSNRAQEMPAT*TARLPD
Trigger: GTCCGGGAGGCGCGCGGTCCAAGTCGCAGGCATCTC...CTGAGCCCTGTTGCTGTCCAGAATTACGCTTACCTGAAGCTTCTGAAGTGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CCA 90 bp GTCTCTTTTGCGCTTGGATGGCCGTCAGCTCAGCATGAGGCATCTGAAAGAACTGCCACGGCCTGGATCTaGCCCTTGAGCACGGTCTCC +
Preference number: 4 (lower is better)
Translates to: VSFALGWPSAQHEASERTATAWI*PLSTVS
Trigger: GGAGACCGTGCTCAAGGGCCAGATCCAGGCCGTGGC...AGTTCTTTCAGATGCCTCATGCTGAGCTGACGGCCATCCAAGCGCAAAAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp TTGAACAGCTCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGGCCACGGCCTGGATCTaGCCCTTGAGCACGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LNSSGETRPSKGPTRIQMATAWI*PLSTVS
Trigger: GGAGACCGTGCTCAAGGGCCAGATCCAGGCCGTGGC...CATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGAGCTGTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp GTCTCTTTTGCGCTTGGATGGCCGTCAGCTCAGCATGAGGCATCTGAAAGAACTTGGGGTCATCGGGACTaGCCACGGCCTGGATCTGGC +
Preference number: 4 (lower is better)
Translates to: VSFALGWPSAQHEASERTWGHRD*PRPGSG
Trigger: GCCAGATCCAGGCCGTGGCCAGTCCCGATGACCCCA...AGTTCTTTCAGATGCCTCATGCTGAGCTGACGGCCATCCAAGCGCAAAAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR TCA 90 bp TTGAACAGCTCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGCCTGGATCTGGCCCTTaGGCACGGTCTCCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: LNSSGETRPSKGPTRIQMPGSGP*ARSPCP
Trigger: CGGACAAGGAGACCGTGCTCAAGGGCCAGATCCAGG...CATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGAGCTGTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR GCA 90 bp CTCACCTCCAGGCACACCTTCTCCCCGATGGTAGTGAGGACGTCCTTCAGATGGCTCATCTCGAGCAGGTaGACACAGTGTCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: LTSRHTFSPMVVRTSFRWLISSR*TQCPHH
Trigger: ATGATGGGGACACTGTGTGCACCTGCTCGAGATGAG...CCATCTGAAGGACGTCCTCACTACCATCGGGGAGAAGGTGTGCCTGGAGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR GCA 90 bp GATTCGAGATTCCATGATCCTGCGAATGGGGTCATCGGGACTGGCCACGGCCTGGTCAGTTGTTCCAGCTaGAACTGGAGCTCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: DSRFHDPANGVIGTGHGLVSCSS*NWSSWK
Trigger: CTTCCACGAGCTCCAGTTGCAGCTGGAACAACTGAC...CAGGCCGTGGCCAGTCCCGATGACCCCATTCGCAGGATCATGGAATCTCGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR CAA 72 bp GCAGGAGGTGAGGCCATGGCTTGGTCTCTTTTGCGCTaGGATGGCCGTCAGCTCAGCATGAGGCATCTGAAA +
Preference number: 4 (lower is better)
Translates to: AGGEAMAWSLLR*DGRQLSMRHLK
Trigger: TTTCAGATGCCTCATGCTGAGCTGACGGCCATCCAAGCGCAAAAGAGACCAAGCCATGGCCTCACCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR TCA 90 bp GGATGGCCGTCAGCTCAGCATGAGGCATCTGAAAGAACTACCCAGATTGCAGAAACCAGAAGGGAGGGGTaGGGGACAAGGCTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GWPSAQHEASERTTQIAETRREG*GTRLSE
Trigger: CTCAGACAGCCTTGTCCCTCACCCCTCCCTTCTGGT...TTCTGCAATCTGGGTAGTTCTTTCAGATGCCTCATGCTGAGCTGACGGCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp CGAGGTTGTGTTAATCCGATGATCAACATTGAACAGCTCTGGAGAGACAAGGCCTGGGGTCATCGGGACTaGCCACGGCCTGGATCTGGC +
Preference number: 4 (lower is better)
Translates to: RGCVNPMINIEQLWRDKAWGHRD*PRPGSG
Trigger: GCCAGATCCAGGCCGTGGCCAGTCCCGATGACCCCA...GGCCTTGTCTCTCCAGAGCTGTTCAATGTTGATCATCGGATTAACACAACCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp CATGGCTTGGTCTCTTTTGCGCTTGGATGGCCGTCAGCTCAGCATGAGGCATCTGGTCTCTTTTGCGCTTaGATGGCCGTCAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: HGLVSFALGWPSAQHEASGLFCA*MAVSSA
Trigger: TGCTGAGCTGACGGCCATCCAAGCGCAAAAGAGACC...AGATGCCTCATGCTGAGCTGACGGCCATCCAAGCGCAAAAGAGACCAAGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp CATGGCTTGGTCTCTTTTGCGCTTGGATGGCCGTCAGCTCAGCATGAGGCATCTCAGGAGGTGAGGCCATaGCTTGGTCTCTTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: HGLVSFALGWPSAQHEASQEVRP*LGLFCA
Trigger: AGCGCAAAAGAGACCAAGCCATGGCCTCACCTCCTG...AGATGCCTCATGCTGAGCTGACGGCCATCCAAGCGCAAAAGAGACCAAGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp TCCCCCAGGGACTGTGGGCAATGGCTTCTGATGACCCGAGGCAAGGTAGGTTTCCTGTATCTGGGAGGCTaGGCGTTGGTTTCAGACATA +
Preference number: 4 (lower is better)
Translates to: SPRDCGQWLLMTRGKVGFLYLGG*ALVSDI
Trigger: TATGTCTGAAACCAACGCCCAGCCTCCCAGATACAG...GAAACCTACCTTGCCTCGGGTCATCAGAAGCCATTGCCCACAGTCCCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR TCA 90 bp TCAGTTGTTCCAGCTGCAACTGGAGCTCGTGGAAGCGAGACTGGTCCATTAAAACTCTCTGAACTGGACTaGGTCCCCCAGGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: SVVPAATGARGSETGPLKLSELD*VPQGLW
Trigger: CCACAGTCCCTGGGGGACTCAGTCCAGTTCAGAGAG...TTTTAATGGACCAGTCTCGCTTCCACGAGCTCCAGTTGCAGCTGGAACAACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR GCA 90 bp TCTGATGACCCGAGGCAAGGTAGGTTTCTAAGAAGGTCAGGATTCGAGATTCCAAGGCGAAGAGATGCCTaGGACTTGGACCGCGCGCCT +
Preference number: 4 (lower is better)
Translates to: SDDPRQGRFLRRSGFEIPRRRDA*DLDRAP
Trigger: AGGCGCGCGGTCCAAGTCGCAGGCATCTCTTCGCCT...TGGAATCTCGAATCCTGACCTTCTTAGAAACCTACCTTGCCTCGGGTCATCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR GCA 90 bp ATCTCGAGCAGGTGCACACAGTGTCCCCATCATGCCAATAATGAATTCTGCCAGGAAGAGGCGAAGAGATaGCTGCGACTTGGACCGCGC +
Preference number: 4 (lower is better)
Translates to: ISSRCTQCPHHANNEFCQEEAKR*LRLGPR
Trigger: GCGCGGTCCAAGTCGCAGGCATCTCTTCGCCTCTTC...CTGGCAGAATTCATTATTGGCATGATGGGGACACTGTGTGCACCTGCTCGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CCA 90 bp TCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGAAGATGAAGTCGGGGAACGGCCTCTaGAGGTGGTCCCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: SGETRPSKGPTRIQMKMKSGNGL*RWSHFR
Trigger: TCTGAAGTGGGACCACCTCCAGAGGCCGTTCCCCGA...CTTCATCTTCATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp TTGAACAGCTCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGAGGGACTGTGGGCAATaGCTTCTGATGACCCGAGGC +
Preference number: 4 (lower is better)
Translates to: LNSSGETRPSKGPTRIQMRDCGQ*LLMTRG
Trigger: GCCTCGGGTCATCAGAAGCCATTGCCCACAGTCCCT...CATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGAGCTGTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR TCA 90 bp CAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTGTTCCCCTCCTCTGGCACTaGGCTCCACTCGCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: QVFSTVIHNILPFGIGAVPLLWH*APLAPG
Trigger: GCCGGGCGCGAGTGGAGCTCAGTGCCAGAGGAGGGG...AACAGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp ATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATTCTGTGGCTAGTGACAGCCTCGAGGGGTaGGCTCCACCCGCCCGCGGA +
Preference number: 4 (lower is better)
Translates to: IAIFQCNIRVQNRYSVASDSLEG*APPARG
Trigger: TCCGCGGGCGGGTGGAGCTCACCCCTCGAGGCTGTC...ACTAGCCACAGAATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR GCA 90 bp GATTCGAGATTCCATGATCCTGCGAATGGGGTCATCGGGACTGGCCACGGCCTGGGATCTTCACTTAGCTaGACACTCAAGCAATCCCAA +
Preference number: 4 (lower is better)
Translates to: DSRFHDPANGVIGTGHGLGSSLS*TLKQSQ
Trigger: TTGGGATTGCTTGAGTGTGCAGCTAAGTGAAGATCC...CAGGCCGTGGCCAGTCCCGATGACCCCATTCGCAGGATCATGGAATCTCGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR GCA 90 bp CATGGCTTGGTCTCTTTTGCGCTTGGATGGCCGTCAGCTCAGCATGAGGCATCTACTGCTGCTGTAGGGTaGATACACGTTAGGATCGGA +
Preference number: 4 (lower is better)
Translates to: HGLVSFALGWPSAQHEASTAAVG*IHVRIG
Trigger: TCCGATCCTAACGTGTATGCACCCTACAGCAGCAGT...AGATGCCTCATGCTGAGCTGACGGCCATCCAAGCGCAAAAGAGACCAAGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR GCA 90 bp GTCTCTTTTGCGCTTGGATGGCCGTCAGCTCAGCATGAGGCATCTGAAAGAACTTGGCTTGGTCTCTTTTaGGCTTGGATGGCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: VSFALGWPSAQHEASERTWLGLF*AWMAVS
Trigger: GCTGACGGCCATCCAAGCGCAAAAGAGACCAAGCCA...AGTTCTTTCAGATGCCTCATGCTGAGCTGACGGCCATCCAAGCGCAAAAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp TCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCCCAGCCCGACTCGGGTaGGCAGCGGTCAGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: STSLFNSDTQYSSLWNRCPARLG*AAVRAA
Trigger: GGCCGCTCTGACCGCTGCCCACCCGAGTCGGGCTGG...GCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334274.9
CDS-3UTR CCA 90 bp ATCTCGAGCAGGTGCACACAGTGTCCCCATCATGCCAATAATGAATTCTGCCAGGTCCCCCAGGGACTGTaGGCAATGGCTTCTGATGAC +
Preference number: 4 (lower is better)
Translates to: ISSRCTQCPHHANNEFCQVPQGL*AMASDD
Trigger: GTCATCAGAAGCCATTGCCCACAGTCCCTGGGGGAC...CTGGCAGAATTCATTATTGGCATGATGGGGACACTGTGTGCACCTGCTCGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR TCA 90 bp GATTCGAGATTCCATGATCCTGCGAATGGGGTCATCGGGACTGGCCACGGCCTGTCTTCACAATCATCTTaGGTTTCTCAGCAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: DSRFHDPANGVIGTGHGLSSQSS*VSQQSR
Trigger: CCGACTTTGCTGAGAAACTCAAGATGATTGTGAAGA...CAGGCCGTGGCCAGTCCCGATGACCCCATTCGCAGGATCATGGAATCTCGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR TCA 90 bp CGAGGTTGTGTTAATCCGATGATCAACATTGAACAGCTCTGGAGAGACAAGGCCTCCTCCAGCTCTCTCTaGACTGGACTGAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: RGCVNPMINIEQLWRDKASSSSL*TGLSPP
Trigger: TGGGGGACTCAGTCCAGTTCAGAGAGAGCTGGAGGA...GGCCTTGTCTCTCCAGAGCTGTTCAATGTTGATCATCGGATTAACACAACCTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR TCA 90 bp ATTCTGCCAGCTTGGAAATGTCTAGCGCCCCATTCTCTGCTTCCTGCTTTATCATCCTCCAGCTCTCTCTaGACTGGACTGAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: ILPAWKCLAPHSLLPALSSSSSL*TGLSPP
Trigger: TGGGGGACTCAGTCCAGTTCAGAGAGAGCTGGAGGA...TGATAAAGCAGGAAGCAGAGAATGGGGCGCTAGACATTTCCAAGCTGGCAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR GCA 90 bp GGATGGCCGTCAGCTCAGCATGAGGCATCTGAAAGAACTACCCAGATTGCAGAACTCATCTCGAGCAGGTaGACACAGTGTCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: GWPSAQHEASERTTQIAELISSR*TQCPHH
Trigger: ATGATGGGGACACTGTGTGCACCTGCTCGAGATGAG...TTCTGCAATCTGGGTAGTTCTTTCAGATGCCTCATGCTGAGCTGACGGCCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR GCA 90 bp TTGAACAGCTCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGCTCATCTCGAGCAGGTaGACACAGTGTCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: LNSSGETRPSKGPTRIQMLISSR*TQCPHH
Trigger: ATGATGGGGACACTGTGTGCACCTGCTCGAGATGAG...CATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGAGCTGTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp CGAGGTTGTGTTAATCCGATGATCAACATTGAACAGCTCTGGAGAGACAAGGCCGGTCTCTGCACTCTTTaGGGGCTGGAGGAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: RGCVNPMINIEQLWRDKAGLCTL*GLEESD
Trigger: GTCAGACTCCTCCAGCCCCCAAAGAGTGCAGAGACC...GGCCTTGTCTCTCCAGAGCTGTTCAATGTTGATCATCGGATTAACACAACCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp TCCCCCAGGGACTGTGGGCAATGGCTTCTGATGACCCGAGGCAAGGTAGGTTTCAAAGTCCAGGGAATTTaGTTGCCTCTCCAAAATCTC +
Preference number: 4 (lower is better)
Translates to: SPRDCGQWLLMTRGKVGFKVQGI*LPLQNL
Trigger: GAGATTTTGGAGAGGCAACCAAATTCCCTGGACTTT...GAAACCTACCTTGCCTCGGGTCATCAGAAGCCATTGCCCACAGTCCCTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CCA 90 bp ATTAAAACTGTTTCGGGGAACGGCCTCTGGAGGTGGTCCCACTTCAGAAGCTTCGCTTCTTCCAGCCACTaGGTGACAAAGTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: IKTVSGNGLWRWSHFRSFASSSH*VTKSRE
Trigger: TTCCCTGGACTTTGTCACCCAGTGGCTGGAAGAAGC...GAAGCTTCTGAAGTGGGACCACCTCCAGAGGCCGTTCCCCGAAACAGTTTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CCA 90 bp CACAGTGTCCCCATCATGCCAATAATGAATTCTGCCAGCTTGGAAATGTCTAGCTCGGGGAACGGCCTCTaGAGGTGGTCCCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: HSVPIMPIMNSASLEMSSSGNGL*RWSHFR
Trigger: TCTGAAGTGGGACCACCTCCAGAGGCCGTTCCCCGA...GCTAGACATTTCCAAGCTGGCAGAATTCATTATTGGCATGATGGGGACACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CCA 90 bp CTTACTCAGGATTGCATCGTAGTAGGGACAGAAGACCATCTTGTTATAGTTGACTGGGGTCATCGGGACTaGCCACGGCCTGGATCTGGC +
Preference number: 4 (lower is better)
Translates to: LTQDCIVVGTEDHLVIVDWGHRD*PRPGSG
Trigger: GCCAGATCCAGGCCGTGGCCAGTCCCGATGACCCCA...GTCAACTATAACAAGATGGTCTTCTGTCCCTACTACGATGCAATCCTGAGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CCA 90 bp CGAGGTTGTGTTAATCCGATGATCAACATTGAACAGCTCTGGAGAGACAAGGCCGTCCCCCAGGGACTGTaGGCAATGGCTTCTGATGAC +
Preference number: 4 (lower is better)
Translates to: RGCVNPMINIEQLWRDKAVPQGL*AMASDD
Trigger: GTCATCAGAAGCCATTGCCCACAGTCCCTGGGGGAC...GGCCTTGTCTCTCCAGAGCTGTTCAATGTTGATCATCGGATTAACACAACCTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp GTCTCTTTTGCGCTTGGATGGCCGTCAGCTCAGCATGAGGCATCTGAAAGAACTGGTGAGGCCATGGCTTaGTCTCTTTTGCGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: VSFALGWPSAQHEASERTGEAMA*SLLRLD
Trigger: ATCCAAGCGCAAAAGAGACCAAGCCATGGCCTCACC...AGTTCTTTCAGATGCCTCATGCTGAGCTGACGGCCATCCAAGCGCAAAAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR TCA 90 bp TCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGAAGATGAAGCTAGAGCCATGTTGGTaGCACCTCTCGCTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: SGETRPSKGPTRIQMKMKLEPCW*HLSLSL
Trigger: TAGAGACAGCGAGAGGTGTCACCAACATGGCTCTAG...CTTCATCTTCATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR TCA 90 bp TCAGTTGTTCCAGCTGCAACTGGAGCTCGTGGAAGCGAGACTGGTCCATTAAAACTTCCAGCCACTGGGTaGCAAAGTCCAGGGAATTTG +
Preference number: 4 (lower is better)
Translates to: SVVPAATGARGSETGPLKLPATG*QSPGNL
Trigger: CAAATTCCCTGGACTTTGTCACCCAGTGGCTGGAAG...TTTTAATGGACCAGTCTCGCTTCCACGAGCTCCAGTTGCAGCTGGAACAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR TCA 90 bp CCACTTCAGAAGCTTCAGGTAAGCGTAATTCTGGACAGCAACAGGGCTCAGCCTGGATTCGAGATTCCATaGTCCTGCGAATGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: PLQKLQVSVILDSNRAQPGFEIP*SCEWGH
Trigger: ATGACCCCATTCGCAGGATCATGGAATCTCGAATCC...AGGCTGAGCCCTGTTGCTGTCCAGAATTACGCTTACCTGAAGCTTCTGAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR TCA 90 bp ATTCTGCCAGCTTGGAAATGTCTAGCGCCCCATTCTCTGCTTCCTGCTTTATCACCCGGACCTCACCAGTaGTTGCACCTTTCTCAACTC +
Preference number: 4 (lower is better)
Translates to: ILPAWKCLAPHSLLPALSPGPHQ*LHLSQL
Trigger: GAGTTGAGAAAGGTGCAATCACTGGTGAGGTCCGGG...TGATAAAGCAGGAAGCAGAGAATGGGGCGCTAGACATTTCCAAGCTGGCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR GCA 90 bp ACAATATTCTTCCCTTTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCCGGAAGCCGGAGGGATaGGCGGCAGGCAGGGGCGGT +
Preference number: 4 (lower is better)
Translates to: TIFFPLESVLLNRHVLYSRKPEG*AAGRGG
Trigger: ACCGCCCCTGCCTGCCGCGCATCCCTCCGGCTTCCG...GCTATATAGTACATGTCTATTTAACAGCACCGATTCCAAAGGGAAGAATATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334274.9
CDS-3UTR GCA 90 bp TCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGAAGATGAAGGTCAGTTGTTCCAGCTaGAACTGGAGCTCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: SGETRPSKGPTRIQMKMKVSCSS*NWSSWK
Trigger: CTTCCACGAGCTCCAGTTGCAGCTGGAACAACTGAC...CTTCATCTTCATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR GCA 90 bp CGAGGTTGTGTTAATCCGATGATCAACATTGAACAGCTCTGGAGAGACAAGGCCGGAAATTCCTGGCGCTaGCATGCTGAAGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: RGCVNPMINIEQLWRDKAGNSWR*HAEGDQ
Trigger: CTGGTCACCTTCAGCATGGCAGCGCCAGGAATTTCC...GGCCTTGTCTCTCCAGAGCTGTTCAATGTTGATCATCGGATTAACACAACCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp CTGCATGAGATGAGGCCTGATGCTACTGATAGCAAAGTTGGCCATGTCCACTTTTGTTCCAGCTGCAACTaGAGCTCGTGGAAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: LHEMRPDATDSKVGHVHFCSSCN*SSWKRD
Trigger: GTCTCGCTTCCACGAGCTCCAGTTGCAGCTGGAACA...AAAGTGGACATGGCCAACTTTGCTATCAGTAGCATCAGGCCTCATCTCATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CCA 90 bp TCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGAAGATGAAGAGGACGTCCTTCAGATaGAAGGAGGGCAGGTGCATA +
Preference number: 4 (lower is better)
Translates to: SGETRPSKGPTRIQMKMKRTSFR*KEGRCI
Trigger: TATGCACCTGCCCTCCTTCCATCTGAAGGACGTCCT...CTTCATCTTCATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp CTAGTGAGTAATACTGCTGCTGTAGGGTGCATACACGTTAGGATCGGACGAGGAAGGACGTCCTTCAGATaGAAGGAGGGCAGGTGCATA +
Preference number: 4 (lower is better)
Translates to: LVSNTAAVGCIHVRIGRGRTSFR*KEGRCI
Trigger: TATGCACCTGCCCTCCTTCCATCTGAAGGACGTCCT...TCCTCGTCCGATCCTAACGTGTATGCACCCTACAGCAGCAGTATTACTCACTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CCA 90 bp TCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCAGGGCTTGGGAGCCCTaGCTAGGCCAGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: STSLFNSDTQYSSLWNRCRAWEP*LGQAGR
Trigger: CCTCCCTGCCTGGCCTAGCCAGGGCTCCCAAGCCCT...GCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR TCA 90 bp ATACACGTTAGGATCGGACGAGGATCTTACTCAGGATTGCATCGTAGTAGGGACCTAGAGCCATGTTGGTaGCACCTCTCGCTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: IHVRIGRGSYSGLHRSRDLEPCW*HLSLSL
Trigger: TAGAGACAGCGAGAGGTGTCACCAACATGGCTCTAG...GTCCCTACTACGATGCAATCCTGAGTAAGATCCTCGTCCGATCCTAACGTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR TCA 90 bp CGAGCAGGTGCACACAGTGTCCCCATCATGCCAATAATGAATTCTGCCAGCTTGCCTTTCGTATTCAACTaGCTGCTGCATGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: RAGAHSVPIMPIMNSASLPFVFN*LLHEMR
Trigger: CCTCATCTCATGCAGCAGTCAGTTGAATACGAAAGG...CAAGCTGGCAGAATTCATTATTGGCATGATGGGGACACTGTGTGCACCTGCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR TCA 90 bp TTCCTGCTTTATCAGATCCAGATCCAAGACTTCTGTTATCTGGTTTCTCAGTCTCCTGGATCTGGCCCTTaGGCACGGTCTCCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: FLLYQIQIQDFCYLVSQSPGSGP*ARSPCP
Trigger: CGGACAAGGAGACCGTGCTCAAGGGCCAGATCCAGG...AGACTGAGAAACCAGATAACAGAAGTCTTGGATCTGGATCTGATAAAGCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR TCA 90 bp TCAGTTGTTCCAGCTGCAACTGGAGCTCGTGGAAGCGAGACTGGTCCATTAAAAATTATCTTCACATGCTaGGAAGGAGCCCAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SVVPAATGARGSETGPLKIIFTC*EGAQEG
Trigger: TCCCTCCTGGGCTCCTTCTCAGCATGTGAAGATAAT...TTTTAATGGACCAGTCTCGCTTCCACGAGCTCCAGTTGCAGCTGGAACAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR GCA 90 bp TTCTTATCCAATCTCAGGGAAGCTGTAGGATCTTATGCAGAAAATCAAAGAATAGGGCGGTTCAGCCTCTaGCCCTCCGAGGCCGCATCC +
Preference number: 4 (lower is better)
Translates to: FLSNLREAVGSYAENQRIGRFSL*PSEAAS
Trigger: GGATGCGGCCTCGGAGGGGCAGAGGCTGAACCGCCC...TATTCTTTGATTTTCTGCATAAGATCCTACAGCTTCCCTGAGATTGGATAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR GCA 90 bp AAAATGGCAATAAGACGTTATATAGCCCTTCTAACAAAAATACCAGAAGGGAGGCGGCGTTCTCCCTCCTaGCGCTCCCGCCGCGAATCA +
Preference number: 4 (lower is better)
Translates to: KMAIRRYIALLTKIPEGRRRSPS*RSRRES
Trigger: TGATTCGCGGCGGGAGCGGCAGGAGGGAGAACGCCG...CCTCCCTTCTGGTATTTTTGTTAGAAGGGCTATATAACGTCTTATTGCCATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334274.9
CDS-3UTR GCA 90 bp CATGGCTTGGTCTCTTTTGCGCTTGGATGGCCGTCAGCTCAGCATGAGGCATCTGTTTATTCACTTTCTTaGCAAGAAGACGGTCATCCG +
Preference number: 4 (lower is better)
Translates to: HGLVSFALGWPSAQHEASVYSLS*QEDGHP
Trigger: CGGATGACCGTCTTCTTGGCAAGAAAGTGAATAAAC...AGATGCCTCATGCTGAGCTGACGGCCATCCAAGCGCAAAAGAGACCAAGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432887.5
CDS-3UTR CCA 90 bp CATGGCTTGGTCTCTTTTGCGCTTGGATGGCCGTCAGCTCAGCATGAGGCATCTACAAGTTTGATAGCATaGTCATATGCTGGGGGATCT +
Preference number: 4 (lower is better)
Translates to: HGLVSFALGWPSAQHEASTSLIA*SYAGGS
Trigger: AGATCCCCCAGCATATGACCATGCTATCAAACTTGT...AGATGCCTCATGCTGAGCTGACGGCCATCCAAGCGCAAAAGAGACCAAGCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp CACAGTGTCCCCATCATGCCAATAATGAATTCTGCCAGCTTGGAAATGTCTAGCCTGGCTGGAAATTCCTaGCGCTGCCATGCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: HSVPIMPIMNSASLEMSSLAGNS*RCHAEG
Trigger: ACCTTCAGCATGGCAGCGCCAGGAATTTCCAGCCAG...GCTAGACATTTCCAAGCTGGCAGAATTCATTATTGGCATGATGGGGACACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CCA 90 bp TCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCCACGCGGGCCTAGGCTaGACACAAGAGGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: STSLFNSDTQYSSLWNRCHAGLG*TQEAPQ
Trigger: CTGGGGAGCCTCTTGTGTCCAGCCTAGGCCCGCGTG...GCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp CAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTGTTCCCGACATCCCGGGATaGGATCCGACGGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: QVFSTVIHNILPFGIGAVPDIPG*DPTGRG
Trigger: GCCTCTTCCCGTCGGATCCCATCCCGGGATGTCGGG...AACAGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR CAA 72 bp AGTGTCCCCATCATGCCAATAATGAATTCTGCCAGCTaGGAAATGTCTAGCGCCCCATTCTCTGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SVPIMPIMNSAS*EMSSAPFSASC
Trigger: GCAGGAAGCAGAGAATGGGGCGCTAGACATTTCCAAGCTGGCAGAATTCATTATTGGCATGATGGGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR TCA 90 bp CAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTCCTGGATCTGGCCCTTaGGCACGGTCTCCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: QQVFSTVIHNILPFGIGAPGSGP*ARSPCP
Trigger: CGGACAAGGAGACCGTGCTCAAGGGCCAGATCCAGG...AGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp CGAGGTTGTGTTAATCCGATGATCAACATTGAACAGCTCTGGAGAGACAAGGCCGGATTCGAGATTCCATaGTCCTGCGAATGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: RGCVNPMINIEQLWRDKAGFEIP*SCEWGH
Trigger: ATGACCCCATTCGCAGGATCATGGAATCTCGAATCC...GGCCTTGTCTCTCCAGAGCTGTTCAATGTTGATCATCGGATTAACACAACCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR TCA 90 bp AGGGAAGCTGTAGGATCTTATGCAGAAAATCAAAGAATAACAGCTGTCCGAAGACTCTCTGAACTGGACTaGGTCCCCCAGGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: REAVGSYAENQRITAVRRLSELD*VPQGLW
Trigger: CCACAGTCCCTGGGGGACTCAGTCCAGTTCAGAGAG...TCTTCGGACAGCTGTTATTCTTTGATTTTCTGCATAAGATCCTACAGCTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR TCA 90 bp TTGAACAGCTCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGTCCGATGATCAACATTaGACAGCTCTGGAGAGACAA +
Preference number: 4 (lower is better)
Translates to: LNSSGETRPSKGPTRIQMSDDQH*TALERQ
Trigger: TTGTCTCTCCAGAGCTGTTCAATGTTGATCATCGGA...CATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGAGCTGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR TCA 90 bp CGAGCAGGTGCACACAGTGTCCCCATCATGCCAATAATGAATTCTGCCAGCTTGATTCATTCTGTGCAGTaGGGAGGAAAGGGAGGATTT +
Preference number: 4 (lower is better)
Translates to: RAGAHSVPIMPIMNSASLIHSVQ*GGKGGF
Trigger: AAATCCTCCCTTTCCTCCTCACTGCACAGAATGAAT...CAAGCTGGCAGAATTCATTATTGGCATGATGGGGACACTGTGTGCACCTGCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR GCA 90 bp GTCTCTTTTGCGCTTGGATGGCCGTCAGCTCAGCATGAGGCATCTGAAAGAACTTGGAAGGAGGGCAGGTaGATATCTGTTAGCAAAATC +
Preference number: 4 (lower is better)
Translates to: VSFALGWPSAQHEASERTWKEGR*ISVSKI
Trigger: GATTTTGCTAACAGATATGCACCTGCCCTCCTTCCA...AGTTCTTTCAGATGCCTCATGCTGAGCTGACGGCCATCCAAGCGCAAAAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR GCA 90 bp GTCCCACTTCAGAAGCTTCAGGTAAGCGTAATTCTGGACAGCAACAGGGCTCAGTGGAAGGAGGGCAGGTaGATATCTGTTAGCAAAATC +
Preference number: 4 (lower is better)
Translates to: VPLQKLQVSVILDSNRAQWKEGR*ISVSKI
Trigger: GATTTTGCTAACAGATATGCACCTGCCCTCCTTCCA...CTGAGCCCTGTTGCTGTCCAGAATTACGCTTACCTGAAGCTTCTGAAGTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CCA 90 bp TTCCCTTTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAGCCACGGCCTGGATCTaGCCCTTGAGCACGGTCTCC +
Preference number: 4 (lower is better)
Translates to: FPLESVLLNRHVLYSHFPATAWI*PLSTVS
Trigger: GGAGACCGTGCTCAAGGGCCAGATCCAGGCCGTGGC...TGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTCCAAAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp TTCCCTTTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCATGGGGTCATCGGGACTaGCCACGGCCTGGATCTGGC +
Preference number: 4 (lower is better)
Translates to: FPLESVLLNRHVLYSHFPWGHRD*PRPGSG
Trigger: GCCAGATCCAGGCCGTGGCCAGTCCCGATGACCCCA...TGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTCCAAAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp AAAATGGCAATAAGACGTTATATAGCCCTTCTAACAAAAATACCAGAAGGGAGGCACGCGGGCCTAGGCTaGACACAAGAGGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: KMAIRRYIALLTKIPEGRHAGLG*TQEAPQ
Trigger: CTGGGGAGCCTCTTGTGTCCAGCCTAGGCCCGCGTG...CCTCCCTTCTGGTATTTTTGTTAGAAGGGCTATATAACGTCTTATTGCCATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432887.5
CDS-3UTR CCA 90 bp TTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGCACGCGGGCCTAGGCTaGACACAAGAGGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: FSTSLFNSDTQYSSLWNRHAGLG*TQEAPQ
Trigger: CTGGGGAGCCTCTTGTGTCCAGCCTAGGCCCGCGTG...CCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp ATCTCGAGCAGGTGCACACAGTGTCCCCATCATGCCAATAATGAATTCTGCCAGGATGGAAAGATGCGTTaGGGCCAGATGGTAAAAGTG +
Preference number: 4 (lower is better)
Translates to: ISSRCTQCPHHANNEFCQDGKMR*GQMVKV
Trigger: CACTTTTACCATCTGGCCCCAACGCATCTTTCCATC...CTGGCAGAATTCATTATTGGCATGATGGGGACACTGTGTGCACCTGCTCGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CCA 90 bp CCACTTCAGAAGCTTCAGGTAAGCGTAATTCTGGACAGCAACAGGGCTCAGCCTGAAACTAACTCTGCCTaGGAGGAGATTGAGAAAACC +
Preference number: 4 (lower is better)
Translates to: PLQKLQVSVILDSNRAQPETNSA*EEIEKT
Trigger: GGTTTTCTCAATCTCCTCCCAGGCAGAGTTAGTTTC...AGGCTGAGCCCTGTTGCTGTCCAGAATTACGCTTACCTGAAGCTTCTGAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR TCA 90 bp TCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGAAGATGAAGGCGTGTTTATACTTCTaGGTCATAAGGTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SGETRPSKGPTRIQMKMKACLYF*VIRSSE
Trigger: CTCAGAGGACCTTATGACTCAGAAGTATAAACACGC...CTTCATCTTCATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR TCA 90 bp CTAGTGAGTAATACTGCTGCTGTAGGGTGCATACACGTTAGGATCGGACGAGGAGCGTGTTTATACTTCTaGGTCATAAGGTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LVSNTAAVGCIHVRIGRGACLYF*VIRSSE
Trigger: CTCAGAGGACCTTATGACTCAGAAGTATAAACACGC...TCCTCGTCCGATCCTAACGTGTATGCACCCTACAGCAGCAGTATTACTCACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR TCA 90 bp GTGGATTTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGCCTGGATCTGGCCCTTaGGCACGGTCTCCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: VDFSTSLFNSDTQYSSLWPGSGP*ARSPCP
Trigger: CGGACAAGGAGACCGTGCTCAAGGGCCAGATCCAGG...CCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAAATCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000531632.6
CDS-3UTR TCA 90 bp CAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTCTCTCTGAACTGGACTaGGTCCCCCAGGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: QQVFSTVIHNILPFGIGALSELD*VPQGLW
Trigger: CCACAGTCCCTGGGGGACTCAGTCCAGTTCAGAGAG...AGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR GCA 90 bp TCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGAAGATGAAGGGATCTTCACTTAGCTaGACACTCAAGCAATCCCAA +
Preference number: 4 (lower is better)
Translates to: SGETRPSKGPTRIQMKMKGSSLS*TLKQSQ
Trigger: TTGGGATTGCTTGAGTGTGCAGCTAAGTGAAGATCC...CTTCATCTTCATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR GCA 90 bp GTCCCACTTCAGAAGCTTCAGGTAAGCGTAATTCTGGACAGCAACAGGGCTCAGGATCTTACTCAGGATTaGATCGTAGTAGGGACAGAA +
Preference number: 4 (lower is better)
Translates to: VPLQKLQVSVILDSNRAQDLTQD*IVVGTE
Trigger: TTCTGTCCCTACTACGATGCAATCCTGAGTAAGATC...CTGAGCCCTGTTGCTGTCCAGAATTACGCTTACCTGAAGCTTCTGAAGTGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR GCA 90 bp GGATGGCCGTCAGCTCAGCATGAGGCATCTGAAAGAACTACCCAGATTGCAGAACTCATAAGTCATAACTaGTCTCAACCAGATGCAGGA +
Preference number: 4 (lower is better)
Translates to: GWPSAQHEASERTTQIAELISHN*SQPDAG
Trigger: TCCTGCATCTGGTTGAGAGCAGTTATGACTTATGAG...TTCTGCAATCTGGGTAGTTCTTTCAGATGCCTCATGCTGAGCTGACGGCCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR GCA 90 bp CAGGGACTGTGGGCAATGGCTTCTGATGACCCGAGGCAAGGTAGGTTTCTAAGAACGAACCATTTAATTTaGTTATATCGCGCGCATCCA +
Preference number: 4 (lower is better)
Translates to: QGLWAMASDDPRQGRFLRTNHLI*LYRAHP
Trigger: TGGATGCGCGCGATATAAGCAAATTAAATGGTTCGT...TCTTAGAAACCTACCTTGCCTCGGGTCATCAGAAGCCATTGCCCACAGTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CCA 90 bp TTGAACAGCTCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGACAAGTTTGATAGCATaGTCATATGCTGGGGGATCT +
Preference number: 4 (lower is better)
Translates to: LNSSGETRPSKGPTRIQMTSLIA*SYAGGS
Trigger: AGATCCCCCAGCATATGACCATGCTATCAAACTTGT...CATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGAGCTGTTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp TCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTCGGGGAACGGCCTCTaGAGGTGGTCCCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: STSLFNSDTQYSSLWNRCSGNGL*RWSHFR
Trigger: TCTGAAGTGGGACCACCTCCAGAGGCCGTTCCCCGA...GCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp CCTACAAGTTTGATAGCATGGTCATATGCTGGGGGATCTTCACTTAGCTGCACACCTGGGCCCCAATTCTaGCTCTTTACTAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: PTSLIAWSYAGGSSLSCTPGPQF*LFTSCV
Trigger: TACACAGCTAGTAAAGAGCCAGAATTGGGGCCCAGG...TGTGCAGCTAAGTGAAGATCCCCCAGCATATGACCATGCTATCAAACTTGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR TCA 90 bp TCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTCTCCTTGTCCGTGGTaGAGGGAGAGGACCCACACA +
Preference number: 4 (lower is better)
Translates to: STSLFNSDTQYSSLWNRCSPCPW*RERTHT
Trigger: TGTGTGGGTCCTCTCCCTTCACCACGGACAAGGAGA...GCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp GACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATCCTGGATCTGGCCCTTaGGCACGGTCTCCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: DMYYIAIFQCNIRVQNRYPGSGP*ARSPCP
Trigger: CGGACAAGGAGACCGTGCTCAAGGGCCAGATCCAGG...ATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp GAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAACATAGGGACAAGGCTGTCTaGGGGAGGGCAGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: ESVLLNRHVLYSHFPMQHRDKAV*GRAGGE
Trigger: CTCACCTCCTGCCCTCCCTCAGACAGCCTTGTCCCT...ATGTTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR TCA 90 bp TTCAATCATCACATCTGTGTATTGTCTCAGGGTCAATTTTTCAGTAAGAATTCCAGGGACAAGGCTGTCTaGGGGAGGGCAGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: FNHHICVLSQGQFFSKNSRDKAV*GRAGGE
Trigger: CTCACCTCCTGCCCTCCCTCAGACAGCCTTGTCCCT...GGAATTCTTACTGAAAAATTGACCCTGAGACAATACACAGATGTGATGATTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR TCA 90 bp AAAATGGCAATAAGACGTTATATAGCCCTTCTAACAAAAATACCAGAAGGGAGGACCAGAAGGGAGGGGTaGGGGACAAGGCTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: KMAIRRYIALLTKIPEGRTRREG*GTRLSE
Trigger: CTCAGACAGCCTTGTCCCTCACCCCTCCCTTCTGGT...CCTCCCTTCTGGTATTTTTGTTAGAAGGGCTATATAACGTCTTATTGCCATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR GCA 90 bp ATTCTCTGCTTCCTGCTTTATCAGATCCAGATCCAAGACTTCTGTTATCTGGTTGAGGATCCTCGCACTTaGCAAGAAGACGGTCATCCG +
Preference number: 4 (lower is better)
Translates to: ILCFLLYQIQIQDFCYLVEDPRT*QEDGHP
Trigger: CGGATGACCGTCTTCTTGGCAAGTGCGAGGATCCTC...AACCAGATAACAGAAGTCTTGGATCTGGATCTGATAAAGCAGGAAGCAGAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CCA 90 bp ATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATTCTGTGGCTAGTGGTCTCTGCACTCTTTaGGGGCTGGAGGAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: IAIFQCNIRVQNRYSVASGLCTL*GLEESD
Trigger: GTCAGACTCCTCCAGCCCCCAAAGAGTGCAGAGACC...ACTAGCCACAGAATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp TTGAACAGCTCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGTTTACTACAATTTCATaGGCTAGAGCCATGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LNSSGETRPSKGPTRIQMFTTIS*ARAMLV
Trigger: CACCAACATGGCTCTAGCCCATGAAATTGTAGTAAA...CATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGAGCTGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp TCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGAAGATGAAGAAAGTCCAGGGAATTTaGTTGCCTCTCCAAAATCTC +
Preference number: 4 (lower is better)
Translates to: SGETRPSKGPTRIQMKMKKVQGI*LPLQNL
Trigger: GAGATTTTGGAGAGGCAACCAAATTCCCTGGACTTT...CTTCATCTTCATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp AAAATGGCAATAAGACGTTATATAGCCCTTCTAACAAAAATACCAGAAGGGAGGTCGGGGAACGGCCTCTaGAGGTGGTCCCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: KMAIRRYIALLTKIPEGRSGNGL*RWSHFR
Trigger: TCTGAAGTGGGACCACCTCCAGAGGCCGTTCCCCGA...CCTCCCTTCTGGTATTTTTGTTAGAAGGGCTATATAACGTCTTATTGCCATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp AGGGAAGCTGTAGGATCTTATGCAGAAAATCAAAGAATAACAGCTGTCCGAAGATGTTCCAGCTGCAACTaGAGCTCGTGGAAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: REAVGSYAENQRITAVRRCSSCN*SSWKRD
Trigger: GTCTCGCTTCCACGAGCTCCAGTTGCAGCTGGAACA...TCTTCGGACAGCTGTTATTCTTTGATTTTCTGCATAAGATCCTACAGCTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp GTTTATCAACGAGGTTGTGTTAATCCGATGATCAACATTGAACAGCTCTGGAGACTGGCTGGAAATTCCTaGCGCTGCCATGCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: VYQRGCVNPMINIEQLWRLAGNS*RCHAEG
Trigger: ACCTTCAGCATGGCAGCGCCAGGAATTTCCAGCCAG...TCTCCAGAGCTGTTCAATGTTGATCATCGGATTAACACAACCTCGTTGATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp TCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCAGGGACTGTGGGCAATaGCTTCTGATGACCCGAGGC +
Preference number: 4 (lower is better)
Translates to: STSLFNSDTQYSSLWNRCRDCGQ*LLMTRG
Trigger: GCCTCGGGTCATCAGAAGCCATTGCCCACAGTCCCT...GCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp GTCTCTTTTGCGCTTGGATGGCCGTCAGCTCAGCATGAGGCATCTGAAAGAACTAGAACAGGTATTCTGTaGCTAGTGAGTAATACTGCT +
Preference number: 4 (lower is better)
Translates to: VSFALGWPSAQHEASERTRTGIL*LVSNTA
Trigger: AGCAGTATTACTCACTAGCCACAGAATACCTGTTCT...AGTTCTTTCAGATGCCTCATGCTGAGCTGACGGCCATCCAAGCGCAAAAGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp CAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTGTTCCTACCTGCTCGGTTTaGGGGGAGATGAAACGAGGG +
Preference number: 4 (lower is better)
Translates to: QVFSTVIHNILPFGIGAVPTCSV*GEMKRG
Trigger: CCCTCGTTTCATCTCCCCCCAAACCGAGCAGGTAGG...AACAGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR TCA 90 bp AAAATGGCAATAAGACGTTATATAGCCCTTCTAACAAAAATACCAGAAGGGAGGTCTCCTTGTCCGTGGTaGAGGGAGAGGACCCACACA +
Preference number: 4 (lower is better)
Translates to: KMAIRRYIALLTKIPEGRSPCPW*RERTHT
Trigger: TGTGTGGGTCCTCTCCCTTCACCACGGACAAGGAGA...CCTCCCTTCTGGTATTTTTGTTAGAAGGGCTATATAACGTCTTATTGCCATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR TCA 90 bp TTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTCTCCTTGTCCGTGGTaGAGGGAGAGGACCCACACA +
Preference number: 4 (lower is better)
Translates to: FSTSLFNSDTQYSSLWNRSPCPW*RERTHT
Trigger: TGTGTGGGTCCTCTCCCTTCACCACGGACAAGGAGA...CCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp TTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAACTCTCTGAACTGGACTaGGTCCCCCAGGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: LESVLLNRHVLYSHFPMQLSELD*VPQGLW
Trigger: CCACAGTCCCTGGGGGACTCAGTCCAGTTCAGAGAG...TTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp ACAATATTCTTCCCTTTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCCTCTCTGAACTGGACTaGGTCCCCCAGGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: TIFFPLESVLLNRHVLYSLSELD*VPQGLW
Trigger: CCACAGTCCCTGGGGGACTCAGTCCAGTTCAGAGAG...GCTATATAGTACATGTCTATTTAACAGCACCGATTCCAAAGGGAAGAATATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp AAAATGGCAATAAGACGTTATATAGCCCTTCTAACAAAAATACCAGAAGGGAGGTCCTCCAGCTCTCTCTaGACTGGACTGAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: KMAIRRYIALLTKIPEGRSSSSL*TGLSPP
Trigger: TGGGGGACTCAGTCCAGTTCAGAGAGAGCTGGAGGA...CCTCCCTTCTGGTATTTTTGTTAGAAGGGCTATATAACGTCTTATTGCCATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp GTGGATTTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGGGTCTCTGCACTCTTTaGGGGCTGGAGGAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: VDFSTSLFNSDTQYSSLWGLCTL*GLEESD
Trigger: GTCAGACTCCTCCAGCCCCCAAAGAGTGCAGAGACC...CCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAAATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000531632.6
CDS-3UTR CCA 90 bp GTTTATCAACGAGGTTGTGTTAATCCGATGATCAACATTGAACAGCTCTGGAGAGCTTCTTCCAGCCACTaGGTGACAAAGTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VYQRGCVNPMINIEQLWRASSSH*VTKSRE
Trigger: TTCCCTGGACTTTGTCACCCAGTGGCTGGAAGAAGC...TCTCCAGAGCTGTTCAATGTTGATCATCGGATTAACACAACCTCGTTGATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp TTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAATCGGGGAACGGCCTCTaGAGGTGGTCCCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: LESVLLNRHVLYSHFPMQSGNGL*RWSHFR
Trigger: TCTGAAGTGGGACCACCTCCAGAGGCCGTTCCCCGA...TTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp ATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATTCTGTGGCTAGTTGTTCCAGCTGCAACTaGAGCTCGTGGAAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: IAIFQCNIRVQNRYSVASCSSCN*SSWKRD
Trigger: GTCTCGCTTCCACGAGCTCCAGTTGCAGCTGGAACA...ACTAGCCACAGAATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp TCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTGTTCCAGCTGCAACTaGAGCTCGTGGAAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: STSLFNSDTQYSSLWNRCCSSCN*SSWKRD
Trigger: GTCTCGCTTCCACGAGCTCCAGTTGCAGCTGGAACA...GCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp CAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTTCAGCAAAGTCGGCCTaGCTGGAAATTCCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: QQVFSTVIHNILPFGIGASAKSA*LEIPGA
Trigger: AGCGCCAGGAATTTCCAGCCAGGCCGACTTTGCTGA...AGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp AAAATGGCAATAAGACGTTATATAGCCCTTCTAACAAAAATACCAGAAGGGAGGAGGGACTGTGGGCAATaGCTTCTGATGACCCGAGGC +
Preference number: 4 (lower is better)
Translates to: KMAIRRYIALLTKIPEGRRDCGQ*LLMTRG
Trigger: GCCTCGGGTCATCAGAAGCCATTGCCCACAGTCCCT...CCTCCCTTCTGGTATTTTTGTTAGAAGGGCTATATAACGTCTTATTGCCATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR TCA 90 bp CAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTGTTCTAGAGCCATGTTGGTaGCACCTCTCGCTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: QVFSTVIHNILPFGIGAVLEPCW*HLSLSL
Trigger: TAGAGACAGCGAGAGGTGTCACCAACATGGCTCTAG...AACAGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp GTTTATCAACGAGGTTGTGTTAATCCGATGATCAACATTGAACAGCTCTGGAGAGACTGCTGCATGAGATaGGGCCTGATGCTACTGATA +
Preference number: 4 (lower is better)
Translates to: VYQRGCVNPMINIEQLWRDCCMR*GLMLLI
Trigger: TATCAGTAGCATCAGGCCTCATCTCATGCAGCAGTC...TCTCCAGAGCTGTTCAATGTTGATCATCGGATTAACACAACCTCGTTGATAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR TCA 90 bp TTCTTATCCAATCTCAGGGAAGCTGTAGGATCTTATGCAGAAAATCAAAGAATATCTCCTTGTCCGTGGTaGAGGGAGAGGACCCACACA +
Preference number: 4 (lower is better)
Translates to: FLSNLREAVGSYAENQRISPCPW*RERTHT
Trigger: TGTGTGGGTCCTCTCCCTTCACCACGGACAAGGAGA...TATTCTTTGATTTTCTGCATAAGATCCTACAGCTTCCCTGAGATTGGATAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR TCA 90 bp GACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATTCCTCCAGCTCTCTCTaGACTGGACTGAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: DMYYIAIFQCNIRVQNRYSSSSL*TGLSPP
Trigger: TGGGGGACTCAGTCCAGTTCAGAGAGAGCTGGAGGA...ATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp GAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAACATGGCAGGCAGTTCACCTaGGGTGAGGAGTTCGAGATC +
Preference number: 4 (lower is better)
Translates to: ESVLLNRHVLYSHFPMQHGRQFT*GEEFEI
Trigger: GATCTCGAACTCCTCACCTCAGGTGAACTGCCTGCC...ATGTTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR GCA 90 bp CAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTGTCAGTTGTTCCAGCTaGAACTGGAGCTCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: QQVFSTVIHNILPFGIGAVSCSS*NWSSWK
Trigger: CTTCCACGAGCTCCAGTTGCAGCTGGAACAACTGAC...AGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR GCA 90 bp ATCTTCACAATCATCTTGAGTTTCTCAGCAAAGTCGGCCTGGCTGGAAATTCCTCATATTCCCCACTTATaGTCCATCTGTATATCCCCC +
Preference number: 4 (lower is better)
Translates to: IFTIILSFSAKSAWLEIPHIPHL*SICISP
Trigger: GGGGGATATACAGATGGAGCATAAGTGGGGAATATG...AGGAATTTCCAGCCAGGCCGACTTTGCTGAGAAACTCAAGATGATTGTGAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CCA 90 bp TTCAATCATCACATCTGTGTATTGTCTCAGGGTCAATTTTTCAGTAAGAATTCCGGTCTCTGCACTCTTTaGGGGCTGGAGGAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: FNHHICVLSQGQFFSKNSGLCTL*GLEESD
Trigger: GTCAGACTCCTCCAGCCCCCAAAGAGTGCAGAGACC...GGAATTCTTACTGAAAAATTGACCCTGAGACAATACACAGATGTGATGATTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp ACAATATTCTTCCCTTTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCGGTCTCTGCACTCTTTaGGGGCTGGAGGAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: TIFFPLESVLLNRHVLYSGLCTL*GLEESD
Trigger: GTCAGACTCCTCCAGCCCCCAAAGAGTGCAGAGACC...GCTATATAGTACATGTCTATTTAACAGCACCGATTCCAAAGGGAAGAATATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp TCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCGCTTCTTCCAGCCACTaGGTGACAAAGTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: STSLFNSDTQYSSLWNRCASSSH*VTKSRE
Trigger: TTCCCTGGACTTTGTCACCCAGTGGCTGGAAGAAGC...GCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp CAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTTGCAACTGGAGCTCGTaGAAGCGAGACTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: QQVFSTVIHNILPFGIGACNWSS*KRDWSI
Trigger: AATGGACCAGTCTCGCTTCCACGAGCTCCAGTTGCA...AGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp TTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGCTGGCTGGAAATTCCTaGCGCTGCCATGCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: FSTSLFNSDTQYSSLWNRLAGNS*RCHAEG
Trigger: ACCTTCAGCATGGCAGCGCCAGGAATTTCCAGCCAG...CCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp TCAAAGACTTTCCTTTCACTAGATCTCATAAGTCATAACTGCTCTCAACCAGATTCAGCAAAGTCGGCCTaGCTGGAAATTCCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: SKTFLSLDLISHNCSQPDSAKSA*LEIPGA
Trigger: AGCGCCAGGAATTTCCAGCCAGGCCGACTTTGCTGA...ATCTGGTTGAGAGCAGTTATGACTTATGAGATCTAGTGAAAGGAAAGTCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp CAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTGTTAGGACGTCCTTCAGATaGAAGGAGGGCAGGTGCATA +
Preference number: 4 (lower is better)
Translates to: QVFSTVIHNILPFGIGAVRTSFR*KEGRCI
Trigger: TATGCACCTGCCCTCCTTCCATCTGAAGGACGTCCT...AACAGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp GAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAACATAGGGACTGTGGGCAATaGCTTCTGATGACCCGAGGC +
Preference number: 4 (lower is better)
Translates to: ESVLLNRHVLYSHFPMQHRDCGQ*LLMTRG
Trigger: GCCTCGGGTCATCAGAAGCCATTGCCCACAGTCCCT...ATGTTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp GACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATAGGGACTGTGGGCAATaGCTTCTGATGACCCGAGGC +
Preference number: 4 (lower is better)
Translates to: DMYYIAIFQCNIRVQNRYRDCGQ*LLMTRG
Trigger: GCCTCGGGTCATCAGAAGCCATTGCCCACAGTCCCT...ATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp ATAGACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGGTCCCCCAGGGACTGTaGGCAATGGCTTCTGATGAC +
Preference number: 4 (lower is better)
Translates to: IDMYYIAIFQCNIRVQNRVPQGL*AMASDD
Trigger: GTCATCAGAAGCCATTGCCCACAGTCCCTGGGGGAC...CCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp ATTCAGTGGATTTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCGTCCCCCAGGGACTGTaGGCAATGGCTTCTGATGAC +
Preference number: 4 (lower is better)
Translates to: IQWISQQVFSTVIHNILPVPQGL*AMASDD
Trigger: GTCATCAGAAGCCATTGCCCACAGTCCCTGGGGGAC...GGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAAATCCACTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp ACAATATTCTTCCCTTTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCGTCCCCCAGGGACTGTaGGCAATGGCTTCTGATGAC +
Preference number: 4 (lower is better)
Translates to: TIFFPLESVLLNRHVLYSVPQGL*AMASDD
Trigger: GTCATCAGAAGCCATTGCCCACAGTCCCTGGGGGAC...GCTATATAGTACATGTCTATTTAACAGCACCGATTCCAAAGGGAAGAATATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp ATTCTGCCAGCTTGGAAATGTCTAGCGCCCCATTCTCTGCTTCCTGCTTTATCAAGAACAGGTATTCTGTaGCTAGTGAGTAATACTGCT +
Preference number: 4 (lower is better)
Translates to: ILPAWKCLAPHSLLPALSRTGIL*LVSNTA
Trigger: AGCAGTATTACTCACTAGCCACAGAATACCTGTTCT...TGATAAAGCAGGAAGCAGAGAATGGGGCGCTAGACATTTCCAAGCTGGCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CCA 90 bp TCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTCTTTTGCGCTTGGATaGCCGTCAGCTCAGCATGAG +
Preference number: 4 (lower is better)
Translates to: STSLFNSDTQYSSLWNRCSFALG*PSAQHE
Trigger: CTCATGCTGAGCTGACGGCCATCCAAGCGCAAAAGA...GCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp ATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATTCTGTGGCTAGTTCTTTTGCGCTTGGATaGCCGTCAGCTCAGCATGAG +
Preference number: 4 (lower is better)
Translates to: IAIFQCNIRVQNRYSVASSFALG*PSAQHE
Trigger: CTCATGCTGAGCTGACGGCCATCCAAGCGCAAAAGA...ACTAGCCACAGAATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp TCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCGGTGAGGCCATGGCTTaGTCTCTTTTGCGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: STSLFNSDTQYSSLWNRCGEAMA*SLLRLD
Trigger: ATCCAAGCGCAAAAGAGACCAAGCCATGGCCTCACC...GCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp TTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGCAGGAGGTGAGGCCATaGCTTGGTCTCTTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: FSTSLFNSDTQYSSLWNRQEVRP*LGLFCA
Trigger: AGCGCAAAAGAGACCAAGCCATGGCCTCACCTCCTG...CCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp TCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGAAGATGAAGAAGTTGTATTGTCATTaGTGCCTCTATCACATGGTT +
Preference number: 4 (lower is better)
Translates to: SGETRPSKGPTRIQMKMKKLYCH*CLYHMV
Trigger: AACCATGTGATAGAGGCACCAATGACAATACAACTT...CTTCATCTTCATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
3UTR CAA 72 bp ATACACGTTAGGATCGGACGAGGATCTTACTCAGGATaGCATCGTAGTAGGGACAGAAGACCATCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: IHVRIGRGSYSG*HRSRDRRPSCY
Trigger: ATAACAAGATGGTCTTCTGTCCCTACTACGATGCAATCCTGAGTAAGATCCTCGTCCGATCCTAACGTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR TCA 90 bp TCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCGACTGCTGCATGAGATaGGGCCTGATGCTACTGATA +
Preference number: 4 (lower is better)
Translates to: STSLFNSDTQYSSLWNRCDCCMR*GLMLLI
Trigger: TATCAGTAGCATCAGGCCTCATCTCATGCAGCAGTC...GCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp CAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTGACTGCTGCATGAGATaGGGCCTGATGCTACTGATA +
Preference number: 4 (lower is better)
Translates to: QQVFSTVIHNILPFGIGADCCMR*GLMLLI
Trigger: TATCAGTAGCATCAGGCCTCATCTCATGCAGCAGTC...AGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp AGGGAAGCTGTAGGATCTTATGCAGAAAATCAAAGAATAACAGCTGTCCGAAGACCTTTCGTATTCAACTaGCTGCTGCATGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: REAVGSYAENQRITAVRRPFVFN*LLHEMR
Trigger: CCTCATCTCATGCAGCAGTCAGTTGAATACGAAAGG...TCTTCGGACAGCTGTTATTCTTTGATTTTCTGCATAAGATCCTACAGCTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR TCA 90 bp TTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGCTTCCAGCCACTGGGTaGCAAAGTCCAGGGAATTTG +
Preference number: 4 (lower is better)
Translates to: FSTSLFNSDTQYSSLWNRLPATG*QSPGNL
Trigger: CAAATTCCCTGGACTTTGTCACCCAGTGGCTGGAAG...CCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp AAAATGGCAATAAGACGTTATATAGCCCTTCTAACAAAAATACCAGAAGGGAGGCTTCCAGCCACTGGGTaGCAAAGTCCAGGGAATTTG +
Preference number: 4 (lower is better)
Translates to: KMAIRRYIALLTKIPEGRLPATG*QSPGNL
Trigger: CAAATTCCCTGGACTTTGTCACCCAGTGGCTGGAAG...CCTCCCTTCTGGTATTTTTGTTAGAAGGGCTATATAACGTCTTATTGCCATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR TCA 90 bp TTCCCTTTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCACTTCCAGCCACTGGGTaGCAAAGTCCAGGGAATTTG +
Preference number: 4 (lower is better)
Translates to: FPLESVLLNRHVLYSHFPLPATG*QSPGNL
Trigger: CAAATTCCCTGGACTTTGTCACCCAGTGGCTGGAAG...TGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTCCAAAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp TCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCGGAGCCCAGGAGGGATaGAGTAATTCATTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: STSLFNSDTQYSSLWNRCGAQEG*SNSFCA
Trigger: TGCACAGAATGAATTACTTCATCCCTCCTGGGCTCC...GCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR GCA 90 bp GTGGATTTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGCTCATCTCGAGCAGGTaGACACAGTGTCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: VDFSTSLFNSDTQYSSLWLISSR*TQCPHH
Trigger: ATGATGGGGACACTGTGTGCACCTGCTCGAGATGAG...CCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAAATCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000531632.6
CDS-3UTR GCA 90 bp ATTCAGTGGATTTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCGGAAATTCCTGGCGCTaGCATGCTGAAGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: IQWISQQVFSTVIHNILPGNSWR*HAEGDQ
Trigger: CTGGTCACCTTCAGCATGGCAGCGCCAGGAATTTCC...GGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAAATCCACTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR GCA 90 bp ACAATATTCTTCCCTTTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCGGAAATTCCTGGCGCTaGCATGCTGAAGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: TIFFPLESVLLNRHVLYSGNSWR*HAEGDQ
Trigger: CTGGTCACCTTCAGCATGGCAGCGCCAGGAATTTCC...GCTATATAGTACATGTCTATTTAACAGCACCGATTCCAAAGGGAAGAATATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR GCA 90 bp GACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATGGAAATTCCTGGCGCTaGCATGCTGAAGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: DMYYIAIFQCNIRVQNRYGNSWR*HAEGDQ
Trigger: CTGGTCACCTTCAGCATGGCAGCGCCAGGAATTTCC...ATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR GCA 90 bp ATAGACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGGGAAATTCCTGGCGCTaGCATGCTGAAGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: IDMYYIAIFQCNIRVQNRGNSWR*HAEGDQ
Trigger: CTGGTCACCTTCAGCATGGCAGCGCCAGGAATTTCC...CCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR GCA 90 bp CAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTACTGCTGCTGTAGGGTaGATACACGTTAGGATCGGA +
Preference number: 4 (lower is better)
Translates to: QQVFSTVIHNILPFGIGATAAVG*IHVRIG
Trigger: TCCGATCCTAACGTGTATGCACCCTACAGCAGCAGT...AGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR GCA 90 bp TTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAATGGCTTGGTCTCTTTTaGGCTTGGATGGCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: LESVLLNRHVLYSHFPMQWLGLF*AWMAVS
Trigger: GCTGACGGCCATCCAAGCGCAAAAGAGACCAAGCCA...TTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR GCA 90 bp TCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGAAGATGAAGTGGACCCAAAGAAATTaGCAAAAGATATCCATCTTT +
Preference number: 4 (lower is better)
Translates to: SGETRPSKGPTRIQMKMKWTQRN*QKISIF
Trigger: AAAGATGGATATCTTTTGGCAATTTCTTTGGGTCCA...CTTCATCTTCATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR GCA 90 bp GTTTATCAACGAGGTTGTGTTAATCCGATGATCAACATTGAACAGCTCTGGAGAGGTTTTAAACGCCTCTaGAGAAAACTCCTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VYQRGCVNPMINIEQLWRGFKRL*RKLLSR
Trigger: CCTGGACAGGAGTTTTCTGCAGAGGCGTTTAAAACC...TCTCCAGAGCTGTTCAATGTTGATCATCGGATTAACACAACCTCGTTGATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp AAAATGGCAATAAGACGTTATATAGCCCTTCTAACAAAAATACCAGAAGGGAGGGCTTCTTCCAGCCACTaGGTGACAAAGTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: KMAIRRYIALLTKIPEGRASSSH*VTKSRE
Trigger: TTCCCTGGACTTTGTCACCCAGTGGCTGGAAGAAGC...CCTCCCTTCTGGTATTTTTGTTAGAAGGGCTATATAACGTCTTATTGCCATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp TTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGGCTTCTTCCAGCCACTaGGTGACAAAGTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: FSTSLFNSDTQYSSLWNRASSSH*VTKSRE
Trigger: TTCCCTGGACTTTGTCACCCAGTGGCTGGAAGAAGC...CCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp GTGGATTTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGTGCAACTGGAGCTCGTaGAAGCGAGACTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: VDFSTSLFNSDTQYSSLWCNWSS*KRDWSI
Trigger: AATGGACCAGTCTCGCTTCCACGAGCTCCAGTTGCA...CCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAAATCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000531632.6
CDS-3UTR CCA 90 bp ACAATATTCTTCCCTTTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCTGTTCCAGCTGCAACTaGAGCTCGTGGAAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: TIFFPLESVLLNRHVLYSCSSCN*SSWKRD
Trigger: GTCTCGCTTCCACGAGCTCCAGTTGCAGCTGGAACA...GCTATATAGTACATGTCTATTTAACAGCACCGATTCCAAAGGGAAGAATATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp ACAATATTCTTCCCTTTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCCTGGCTGGAAATTCCTaGCGCTGCCATGCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: TIFFPLESVLLNRHVLYSLAGNS*RCHAEG
Trigger: ACCTTCAGCATGGCAGCGCCAGGAATTTCCAGCCAG...GCTATATAGTACATGTCTATTTAACAGCACCGATTCCAAAGGGAAGAATATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp ATAGACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGCTGGCTGGAAATTCCTaGCGCTGCCATGCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: IDMYYIAIFQCNIRVQNRLAGNS*RCHAEG
Trigger: ACCTTCAGCATGGCAGCGCCAGGAATTTCCAGCCAG...CCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp TTCAATCATCACATCTGTGTATTGTCTCAGGGTCAATTTTTCAGTAAGAATTCCTCAGCAAAGTCGGCCTaGCTGGAAATTCCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: FNHHICVLSQGQFFSKNSSAKSA*LEIPGA
Trigger: AGCGCCAGGAATTTCCAGCCAGGCCGACTTTGCTGA...GGAATTCTTACTGAAAAATTGACCCTGAGACAATACACAGATGTGATGATTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp TTCTTATCCAATCTCAGGGAAGCTGTAGGATCTTATGCAGAAAATCAAAGAATATCAGCAAAGTCGGCCTaGCTGGAAATTCCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: FLSNLREAVGSYAENQRISAKSA*LEIPGA
Trigger: AGCGCCAGGAATTTCCAGCCAGGCCGACTTTGCTGA...TATTCTTTGATTTTCTGCATAAGATCCTACAGCTTCCCTGAGATTGGATAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp ATAGACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTCAGCAAAGTCGGCCTaGCTGGAAATTCCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: IDMYYIAIFQCNIRVQNRSAKSA*LEIPGA
Trigger: AGCGCCAGGAATTTCCAGCCAGGCCGACTTTGCTGA...CCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp TTCAATCATCACATCTGTGTATTGTCTCAGGGTCAATTTTTCAGTAAGAATTCCGGTCTCTTTTGCGCTTaGATGGCCGTCAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: FNHHICVLSQGQFFSKNSGLFCA*MAVSSA
Trigger: TGCTGAGCTGACGGCCATCCAAGCGCAAAAGAGACC...GGAATTCTTACTGAAAAATTGACCCTGAGACAATACACAGATGTGATGATTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR TCA 90 bp ATTCAGTGGATTTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCCTAGAGCCATGTTGGTaGCACCTCTCGCTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: IQWISQQVFSTVIHNILPLEPCW*HLSLSL
Trigger: TAGAGACAGCGAGAGGTGTCACCAACATGGCTCTAG...GGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAAATCCACTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR TCA 90 bp TTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAACTAGAGCCATGTTGGTaGCACCTCTCGCTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: LESVLLNRHVLYSHFPMQLEPCW*HLSLSL
Trigger: TAGAGACAGCGAGAGGTGTCACCAACATGGCTCTAG...TTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp CAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTGTTCCTTTCGTATTCAACTaGCTGCTGCATGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: QVFSTVIHNILPFGIGAVPFVFN*LLHEMR
Trigger: CCTCATCTCATGCAGCAGTCAGTTGAATACGAAAGG...AACAGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp CAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTCCTTTCGTATTCAACTaGCTGCTGCATGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: QQVFSTVIHNILPFGIGAPFVFN*LLHEMR
Trigger: CCTCATCTCATGCAGCAGTCAGTTGAATACGAAAGG...AGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp TTCTTATCCAATCTCAGGGAAGCTGTAGGATCTTATGCAGAAAATCAAAGAATACTTCCAGCCACTGGGTaGCAAAGTCCAGGGAATTTG +
Preference number: 4 (lower is better)
Translates to: FLSNLREAVGSYAENQRILPATG*QSPGNL
Trigger: CAAATTCCCTGGACTTTGTCACCCAGTGGCTGGAAG...TATTCTTTGATTTTCTGCATAAGATCCTACAGCTTCCCTGAGATTGGATAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR TCA 90 bp AAAATGGCAATAAGACGTTATATAGCCCTTCTAACAAAAATACCAGAAGGGAGGGGATTCGAGATTCCATaGTCCTGCGAATGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: KMAIRRYIALLTKIPEGRGFEIP*SCEWGH
Trigger: ATGACCCCATTCGCAGGATCATGGAATCTCGAATCC...CCTCCCTTCTGGTATTTTTGTTAGAAGGGCTATATAACGTCTTATTGCCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR TCA 90 bp TTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGGGATTCGAGATTCCATaGTCCTGCGAATGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: FSTSLFNSDTQYSSLWNRGFEIP*SCEWGH
Trigger: ATGACCCCATTCGCAGGATCATGGAATCTCGAATCC...CCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp TTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGCCTACGTCATCTCTGTaGTGTCACTGTATCTGGGAG +
Preference number: 4 (lower is better)
Translates to: FSTSLFNSDTQYSSLWNRPTSSL*CHCIWE
Trigger: CTCCCAGATACAGTGACATCACAGAGATGACGTAGG...CCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR GCA 90 bp ATAGACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGCTCATCTCGAGCAGGTaGACACAGTGTCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: IDMYYIAIFQCNIRVQNRLISSR*TQCPHH
Trigger: ATGATGGGGACACTGTGTGCACCTGCTCGAGATGAG...CCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR GCA 90 bp GACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATGTCAGTTGTTCCAGCTaGAACTGGAGCTCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: DMYYIAIFQCNIRVQNRYVSCSS*NWSSWK
Trigger: CTTCCACGAGCTCCAGTTGCAGCTGGAACAACTGAC...ATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR GCA 90 bp ACAATATTCTTCCCTTTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCGTCAGTTGTTCCAGCTaGAACTGGAGCTCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: TIFFPLESVLLNRHVLYSVSCSS*NWSSWK
Trigger: CTTCCACGAGCTCCAGTTGCAGCTGGAACAACTGAC...GCTATATAGTACATGTCTATTTAACAGCACCGATTCCAAAGGGAAGAATATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR GCA 90 bp AGGGAAGCTGTAGGATCTTATGCAGAAAATCAAAGAATAACAGCTGTCCGAAGATGGAAGGAGGGCAGGTaGATATCTGTTAGCAAAATC +
Preference number: 4 (lower is better)
Translates to: REAVGSYAENQRITAVRRWKEGR*ISVSKI
Trigger: GATTTTGCTAACAGATATGCACCTGCCCTCCTTCCA...TCTTCGGACAGCTGTTATTCTTTGATTTTCTGCATAAGATCCTACAGCTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp CTTACTCAGGATTGCATCGTAGTAGGGACAGAAGACCATCTTGTTATAGTTGACACAAGTTTGATAGCATaGTCATATGCTGGGGGATCT +
Preference number: 4 (lower is better)
Translates to: LTQDCIVVGTEDHLVIVDTSLIA*SYAGGS
Trigger: AGATCCCCCAGCATATGACCATGCTATCAAACTTGT...GTCAACTATAACAAGATGGTCTTCTGTCCCTACTACGATGCAATCCTGAGTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CCA 90 bp GTTTATCAACGAGGTTGTGTTAATCCGATGATCAACATTGAACAGCTCTGGAGATCGTGGAAGCGAGACTaGTCCATTAAAACTGTTTCG +
Preference number: 4 (lower is better)
Translates to: VYQRGCVNPMINIEQLWRSWKRD*SIKTVS
Trigger: CGAAACAGTTTTAATGGACCAGTCTCGCTTCCACGA...TCTCCAGAGCTGTTCAATGTTGATCATCGGATTAACACAACCTCGTTGATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp ATAGACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTGCAACTGGAGCTCGTaGAAGCGAGACTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: IDMYYIAIFQCNIRVQNRCNWSS*KRDWSI
Trigger: AATGGACCAGTCTCGCTTCCACGAGCTCCAGTTGCA...CCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp TTCTTATCCAATCTCAGGGAAGCTGTAGGATCTTATGCAGAAAATCAAAGAATATGCAACTGGAGCTCGTaGAAGCGAGACTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: FLSNLREAVGSYAENQRICNWSS*KRDWSI
Trigger: AATGGACCAGTCTCGCTTCCACGAGCTCCAGTTGCA...TATTCTTTGATTTTCTGCATAAGATCCTACAGCTTCCCTGAGATTGGATAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp GACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATTGCAACTGGAGCTCGTaGAAGCGAGACTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: DMYYIAIFQCNIRVQNRYCNWSS*KRDWSI
Trigger: AATGGACCAGTCTCGCTTCCACGAGCTCCAGTTGCA...ATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp GACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATAGGACGTCCTTCAGATaGAAGGAGGGCAGGTGCATA +
Preference number: 4 (lower is better)
Translates to: DMYYIAIFQCNIRVQNRYRTSFR*KEGRCI
Trigger: TATGCACCTGCCCTCCTTCCATCTGAAGGACGTCCT...ATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp TTCAATCATCACATCTGTGTATTGTCTCAGGGTCAATTTTTCAGTAAGAATTCCAGGACGTCCTTCAGATaGAAGGAGGGCAGGTGCATA +
Preference number: 4 (lower is better)
Translates to: FNHHICVLSQGQFFSKNSRTSFR*KEGRCI
Trigger: TATGCACCTGCCCTCCTTCCATCTGAAGGACGTCCT...GGAATTCTTACTGAAAAATTGACCCTGAGACAATACACAGATGTGATGATTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp CGAGGTTGTGTTAATCCGATGATCAACATTGAACAGCTCTGGAGAGACAAGGCCTATCACATGGTTCTTTaGAAATCTAATGTGCAGACT +
Preference number: 4 (lower is better)
Translates to: RGCVNPMINIEQLWRDKAYHMVL*KSNVQT
Trigger: AGTCTGCACATTAGATTTCCAAAGAACCATGTGATA...GGCCTTGTCTCTCCAGAGCTGTTCAATGTTGATCATCGGATTAACACAACCTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp GTTTATCAACGAGGTTGTGTTAATCCGATGATCAACATTGAACAGCTCTGGAGAAACATTGAACAGCTCTaGAGAGACAAGGCCGTCAAA +
Preference number: 4 (lower is better)
Translates to: VYQRGCVNPMINIEQLWRNIEQL*RDKAVK
Trigger: TTTGACGGCCTTGTCTCTCCAGAGCTGTTCAATGTT...TCTCCAGAGCTGTTCAATGTTGATCATCGGATTAACACAACCTCGTTGATAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp TTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGCAACTCCTGCAGGGCTaGCTAGTTGACATTTGGCAT +
Preference number: 4 (lower is better)
Translates to: FSTSLFNSDTQYSSLWNRQLLQG*LVDIWH
Trigger: ATGCCAAATGTCAACTAGCCAGCCCTGCAGGAGTTG...CCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
3UTR CAA 72 bp AGGTGCATATCTGTTAGCAAAATCTTCACAATCATCTaGAGTTTCTCAGCAAAGTCGGCCTGGCTGGAAATT +
Preference number: 4 (lower is better)
Translates to: RCISVSKIFTII*SFSAKSAWLEI
Trigger: AATTTCCAGCCAGGCCGACTTTGCTGAGAAACTCAAGATGATTGTGAAGATTTTGCTAACAGATATGCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR TCA 90 bp GTTTATCAACGAGGTTGTGTTAATCCGATGATCAACATTGAACAGCTCTGGAGATTTCTCAGTCTAGTATaGCCAGGCAGCAAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: VYQRGCVNPMINIEQLWRFLSLV*PGSKKD
Trigger: ATCTTTCTTGCTGCCTGGTCATACTAGACTGAGAAA...TCTCCAGAGCTGTTCAATGTTGATCATCGGATTAACACAACCTCGTTGATAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR TCA 90 bp ATTCAGTGGATTTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCGACTGCTGCATGAGATaGGGCCTGATGCTACTGATA +
Preference number: 4 (lower is better)
Translates to: IQWISQQVFSTVIHNILPDCCMR*GLMLLI
Trigger: TATCAGTAGCATCAGGCCTCATCTCATGCAGCAGTC...GGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAAATCCACTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR TCA 90 bp ACAATATTCTTCCCTTTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCGACTGCTGCATGAGATaGGGCCTGATGCTACTGATA +
Preference number: 4 (lower is better)
Translates to: TIFFPLESVLLNRHVLYSDCCMR*GLMLLI
Trigger: TATCAGTAGCATCAGGCCTCATCTCATGCAGCAGTC...GCTATATAGTACATGTCTATTTAACAGCACCGATTCCAAAGGGAAGAATATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp AGGGAAGCTGTAGGATCTTATGCAGAAAATCAAAGAATAACAGCTGTCCGAAGATCTTCACAATCATCTTaGGTTTCTCAGCAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: REAVGSYAENQRITAVRRSSQSS*VSQQSR
Trigger: CCGACTTTGCTGAGAAACTCAAGATGATTGTGAAGA...TCTTCGGACAGCTGTTATTCTTTGATTTTCTGCATAAGATCCTACAGCTTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR TCA 90 bp GAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAACATGGATTCGAGATTCCATaGTCCTGCGAATGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: ESVLLNRHVLYSHFPMQHGFEIP*SCEWGH
Trigger: ATGACCCCATTCGCAGGATCATGGAATCTCGAATCC...ATGTTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR GCA 90 bp ATAGACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGACTGCTGCTGTAGGGTaGATACACGTTAGGATCGGA +
Preference number: 4 (lower is better)
Translates to: IDMYYIAIFQCNIRVQNRTAAVG*IHVRIG
Trigger: TCCGATCCTAACGTGTATGCACCCTACAGCAGCAGT...CCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR GCA 90 bp GAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAACATGACCTCACCAGTGATTaGACCTTTCTCAACTCCTGC +
Preference number: 4 (lower is better)
Translates to: ESVLLNRHVLYSHFPMQHDLTSD*TFLNSC
Trigger: GCAGGAGTTGAGAAAGGTGCAATCACTGGTGAGGTC...ATGTTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CCA 90 bp TCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTCGTGGAAGCGAGACTaGTCCATTAAAACTGTTTCG +
Preference number: 4 (lower is better)
Translates to: STSLFNSDTQYSSLWNRCSWKRD*SIKTVS
Trigger: CGAAACAGTTTTAATGGACCAGTCTCGCTTCCACGA...GCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp GACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATGGTTTCAGACATACCTaGGCCCCAATTCTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: DMYYIAIFQCNIRVQNRYGFRHT*APILAL
Trigger: AAGAGCCAGAATTGGGGCCCAGGTATGTCTGAAACC...ATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CCA 90 bp ACTCAGGATTGCATCGTAGTAGGGACAGAAGACCATCTTGTTATAGTTGACCAGAATGAGAAAAGGAAGTaGCTAGAGATGATGGAAAGA +
Preference number: 4 (lower is better)
Translates to: TQDCIVVGTEDHLVIVDQNEKRK*LEMMER
Trigger: TCTTTCCATCATCTCTAGCCACTTCCTTTTCTCATT...CTGGTCAACTATAACAAGATGGTCTTCTGTCCCTACTACGATGCAATCCTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR TCA 90 bp GACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATCCTTTCGTATTCAACTaGCTGCTGCATGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: DMYYIAIFQCNIRVQNRYPFVFN*LLHEMR
Trigger: CCTCATCTCATGCAGCAGTCAGTTGAATACGAAAGG...ATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp TCAAAGACTTTCCTTTCACTAGATCTCATAAGTCATAACTGCTCTCAACCAGATGCGTGTTTATACTTCTaGGTCATAAGGTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SKTFLSLDLISHNCSQPDACLYF*VIRSSE
Trigger: CTCAGAGGACCTTATGACTCAGAAGTATAAACACGC...ATCTGGTTGAGAGCAGTTATGACTTATGAGATCTAGTGAAAGGAAAGTCTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR TCA 90 bp TTCCCTTTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAGCGTGTTTATACTTCTaGGTCATAAGGTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: FPLESVLLNRHVLYSHFPACLYF*VIRSSE
Trigger: CTCAGAGGACCTTATGACTCAGAAGTATAAACACGC...TGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTCCAAAGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR GCA 90 bp TTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGGGATCTTCACTTAGCTaGACACTCAAGCAATCCCAA +
Preference number: 4 (lower is better)
Translates to: FSTSLFNSDTQYSSLWNRGSSLS*TLKQSQ
Trigger: TTGGGATTGCTTGAGTGTGCAGCTAAGTGAAGATCC...CCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR GCA 90 bp CAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTCTCATAAGTCATAACTaGTCTCAACCAGATGCAGGA +
Preference number: 4 (lower is better)
Translates to: QQVFSTVIHNILPFGIGALISHN*SQPDAG
Trigger: TCCTGCATCTGGTTGAGAGCAGTTATGACTTATGAG...AGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp TTCCTGCTTTATCAGATCCAGATCCAAGACTTCTGTTATCTGGTTTCTCAGTCTTTTACTACAATTTCATaGGCTAGAGCCATGTTGGTG +
Preference number: 4 (lower is better)
Translates to: FLLYQIQIQDFCYLVSQSFTTIS*ARAMLV
Trigger: CACCAACATGGCTCTAGCCCATGAAATTGTAGTAAA...AGACTGAGAAACCAGATAACAGAAGTCTTGGATCTGGATCTGATAAAGCAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CCA 90 bp TCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCACAAGTTTGATAGCATaGTCATATGCTGGGGGATCT +
Preference number: 4 (lower is better)
Translates to: STSLFNSDTQYSSLWNRCTSLIA*SYAGGS
Trigger: AGATCCCCCAGCATATGACCATGCTATCAAACTTGT...GCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp TCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCAAAGTCCAGGGAATTTaGTTGCCTCTCCAAAATCTC +
Preference number: 4 (lower is better)
Translates to: STSLFNSDTQYSSLWNRCKVQGI*LPLQNL
Trigger: GAGATTTTGGAGAGGCAACCAAATTCCCTGGACTTT...GCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp TTCCCTTTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCATTTCTCAGTCTAGTATaGCCAGGCAGCAAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: FPLESVLLNRHVLYSHFPFLSLV*PGSKKD
Trigger: ATCTTTCTTGCTGCCTGGTCATACTAGACTGAGAAA...TGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTCCAAAGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp TTCAATCATCACATCTGTGTATTGTCTCAGGGTCAATTTTTCAGTAAGAATTCCGCGTGTTTATACTTCTaGGTCATAAGGTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: FNHHICVLSQGQFFSKNSACLYF*VIRSSE
Trigger: CTCAGAGGACCTTATGACTCAGAAGTATAAACACGC...GGAATTCTTACTGAAAAATTGACCCTGAGACAATACACAGATGTGATGATTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR TCA 90 bp TTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTCTTCACAATCATCTTaGGTTTCTCAGCAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: FSTSLFNSDTQYSSLWNRSSQSS*VSQQSR
Trigger: CCGACTTTGCTGAGAAACTCAAGATGATTGTGAAGA...CCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR GCA 90 bp TTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAAGGATCTTCACTTAGCTaGACACTCAAGCAATCCCAA +
Preference number: 4 (lower is better)
Translates to: LESVLLNRHVLYSHFPMQGSSLS*TLKQSQ
Trigger: TTGGGATTGCTTGAGTGTGCAGCTAAGTGAAGATCC...TTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR GCA 90 bp TTCAATCATCACATCTGTGTATTGTCTCAGGGTCAATTTTTCAGTAAGAATTCCGGATCTTCACTTAGCTaGACACTCAAGCAATCCCAA +
Preference number: 4 (lower is better)
Translates to: FNHHICVLSQGQFFSKNSGSSLS*TLKQSQ
Trigger: TTGGGATTGCTTGAGTGTGCAGCTAAGTGAAGATCC...GGAATTCTTACTGAAAAATTGACCCTGAGACAATACACAGATGTGATGATTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR GCA 90 bp ATAGACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTGGAAGGAGGGCAGGTaGATATCTGTTAGCAAAATC +
Preference number: 4 (lower is better)
Translates to: IDMYYIAIFQCNIRVQNRWKEGR*ISVSKI
Trigger: GATTTTGCTAACAGATATGCACCTGCCCTCCTTCCA...CCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR GCA 90 bp GAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAACATTGGAAGGAGGGCAGGTaGATATCTGTTAGCAAAATC +
Preference number: 4 (lower is better)
Translates to: ESVLLNRHVLYSHFPMQHWKEGR*ISVSKI
Trigger: GATTTTGCTAACAGATATGCACCTGCCCTCCTTCCA...ATGTTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR GCA 90 bp TCAAAGACTTTCCTTTCACTAGATCTCATAAGTCATAACTGCTCTCAACCAGATGATCTTACTCAGGATTaGATCGTAGTAGGGACAGAA +
Preference number: 4 (lower is better)
Translates to: SKTFLSLDLISHNCSQPDDLTQD*IVVGTE
Trigger: TTCTGTCCCTACTACGATGCAATCCTGAGTAAGATC...ATCTGGTTGAGAGCAGTTATGACTTATGAGATCTAGTGAAAGGAAAGTCTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR GCA 90 bp TTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGGATCTTACTCAGGATTaGATCGTAGTAGGGACAGAA +
Preference number: 4 (lower is better)
Translates to: FSTSLFNSDTQYSSLWNRDLTQD*IVVGTE
Trigger: TTCTGTCCCTACTACGATGCAATCCTGAGTAAGATC...CCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp GTTTATCAACGAGGTTGTGTTAATCCGATGATCAACATTGAACAGCTCTGGAGACTGCTTCATTTACATTaGACTTGTCAAGGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: VYQRGCVNPMINIEQLWRLLHLH*TCQGFQ
Trigger: CTGAAAACCTTGACAAGTCCAATGTAAATGAAGCAG...TCTCCAGAGCTGTTCAATGTTGATCATCGGATTAACACAACCTCGTTGATAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp ATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATTCTGTGGCTAGTTTTACTACAATTTCATaGGCTAGAGCCATGTTGGTG +
Preference number: 4 (lower is better)
Translates to: IAIFQCNIRVQNRYSVASFTTIS*ARAMLV
Trigger: CACCAACATGGCTCTAGCCCATGAAATTGTAGTAAA...ACTAGCCACAGAATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp TTCAATCATCACATCTGTGTATTGTCTCAGGGTCAATTTTTCAGTAAGAATTCCTCGTGGAAGCGAGACTaGTCCATTAAAACTGTTTCG +
Preference number: 4 (lower is better)
Translates to: FNHHICVLSQGQFFSKNSSWKRD*SIKTVS
Trigger: CGAAACAGTTTTAATGGACCAGTCTCGCTTCCACGA...GGAATTCTTACTGAAAAATTGACCCTGAGACAATACACAGATGTGATGATTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp GAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAACATTCGTGGAAGCGAGACTaGTCCATTAAAACTGTTTCG +
Preference number: 4 (lower is better)
Translates to: ESVLLNRHVLYSHFPMQHSWKRD*SIKTVS
Trigger: CGAAACAGTTTTAATGGACCAGTCTCGCTTCCACGA...ATGTTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
3UTR CAA 72 bp AAAGATAAGAGAGTCTCTTTGATTTCTCCTACAAGTTaGATAGCATGGTCATATGCTGGGGGATCTTCACTT +
Preference number: 4 (lower is better)
Translates to: KDKRVSLISPTS*IAWSYAGGSSL
Trigger: AAGTGAAGATCCCCCAGCATATGACCATGCTATCAAACTTGTAGGAGAAATCAAAGAGACTCTCTTATCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR TCA 90 bp TTCAATCATCACATCTGTGTATTGTCTCAGGGTCAATTTTTCAGTAAGAATTCCTTTCTCAGTCTAGTATaGCCAGGCAGCAAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: FNHHICVLSQGQFFSKNSFLSLV*PGSKKD
Trigger: ATCTTTCTTGCTGCCTGGTCATACTAGACTGAGAAA...GGAATTCTTACTGAAAAATTGACCCTGAGACAATACACAGATGTGATGATTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR TCA 90 bp ATAGACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTTTCTCAGTCTAGTATaGCCAGGCAGCAAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: IDMYYIAIFQCNIRVQNRFLSLV*PGSKKD
Trigger: ATCTTTCTTGCTGCCTGGTCATACTAGACTGAGAAA...CCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp GAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAACATTTTCTCAGTCTAGTATaGCCAGGCAGCAAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: ESVLLNRHVLYSHFPMQHFLSLV*PGSKKD
Trigger: ATCTTTCTTGCTGCCTGGTCATACTAGACTGAGAAA...ATGTTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp TTCAATCATCACATCTGTGTATTGTCTCAGGGTCAATTTTTCAGTAAGAATTCCTCTTCACAATCATCTTaGGTTTCTCAGCAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: FNHHICVLSQGQFFSKNSSSQSS*VSQQSR
Trigger: CCGACTTTGCTGAGAAACTCAAGATGATTGTGAAGA...GGAATTCTTACTGAAAAATTGACCCTGAGACAATACACAGATGTGATGATTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR TCA 90 bp ACAATATTCTTCCCTTTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCTCTTCACAATCATCTTaGGTTTCTCAGCAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: TIFFPLESVLLNRHVLYSSSQSS*VSQQSR
Trigger: CCGACTTTGCTGAGAAACTCAAGATGATTGTGAAGA...GCTATATAGTACATGTCTATTTAACAGCACCGATTCCAAAGGGAAGAATATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp CAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTTTGACTTTCAAGGCTTaGAAGTCAAAGACTTTCCTT +
Preference number: 4 (lower is better)
Translates to: QQVFSTVIHNILPFGIGALTFKA*KSKTFL
Trigger: AAGGAAAGTCTTTGACTTTCAAGCCTTGAAAGTCAA...AGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR GCA 90 bp GACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATGATCTTACTCAGGATTaGATCGTAGTAGGGACAGAA +
Preference number: 4 (lower is better)
Translates to: DMYYIAIFQCNIRVQNRYDLTQD*IVVGTE
Trigger: TTCTGTCCCTACTACGATGCAATCCTGAGTAAGATC...ATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp ATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATTCTGTGGCTAGTCTGCTTCATTTACATTaGACTTGTCAAGGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: IAIFQCNIRVQNRYSVASLLHLH*TCQGFQ
Trigger: CTGAAAACCTTGACAAGTCCAATGTAAATGAAGCAG...ACTAGCCACAGAATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp TTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAAACAAGTTTGATAGCATaGTCATATGCTGGGGGATCT +
Preference number: 4 (lower is better)
Translates to: LESVLLNRHVLYSHFPMQTSLIA*SYAGGS
Trigger: AGATCCCCCAGCATATGACCATGCTATCAAACTTGT...TTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp ATTCAGTGGATTTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCAAAGTCCAGGGAATTTaGTTGCCTCTCCAAAATCTC +
Preference number: 4 (lower is better)
Translates to: IQWISQQVFSTVIHNILPKVQGI*LPLQNL
Trigger: GAGATTTTGGAGAGGCAACCAAATTCCCTGGACTTT...GGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAAATCCACTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp AAAATGGCAATAAGACGTTATATAGCCCTTCTAACAAAAATACCAGAAGGGAGGAGAACAGGTATTCTGTaGCTAGTGAGTAATACTGCT +
Preference number: 4 (lower is better)
Translates to: KMAIRRYIALLTKIPEGRRTGIL*LVSNTA
Trigger: AGCAGTATTACTCACTAGCCACAGAATACCTGTTCT...CCTCCCTTCTGGTATTTTTGTTAGAAGGGCTATATAACGTCTTATTGCCATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR TCA 90 bp TTCTTATCCAATCTCAGGGAAGCTGTAGGATCTTATGCAGAAAATCAAAGAATAGTTGTGTTAATCCGATaGTCAACATTGAACAGCTCT +
Preference number: 4 (lower is better)
Translates to: FLSNLREAVGSYAENQRIVVLIR*STLNSS
Trigger: AGAGCTGTTCAATGTTGATCATCGGATTAACACAAC...TATTCTTTGATTTTCTGCATAAGATCCTACAGCTTCCCTGAGATTGGATAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR GCA 90 bp TTCTTATCCAATCTCAGGGAAGCTGTAGGATCTTATGCAGAAAATCAAAGAATATCTTTTTCTCAGGATTaGATCGTAGTAGGGACAGAA +
Preference number: 4 (lower is better)
Translates to: FLSNLREAVGSYAENQRISFSQD*IVVGTE
Trigger: TTCTGTCCCTACTACGATGCAATCCTGAGAAAAAGA...TATTCTTTGATTTTCTGCATAAGATCCTACAGCTTCCCTGAGATTGGATAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CCA 90 bp TCAAAGACTTTCCTTTCACTAGATCTCATAAGTCATAACTGCTCTCAACCAGATCTGCTTCATTTACATTaGACTTGTCAAGGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: SKTFLSLDLISHNCSQPDLLHLH*TCQGFQ
Trigger: CTGAAAACCTTGACAAGTCCAATGTAAATGAAGCAG...ATCTGGTTGAGAGCAGTTATGACTTATGAGATCTAGTGAAAGGAAAGTCTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp ATTCAGTGGATTTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTACTACAATTTCATaGGCTAGAGCCATGTTGGTG +
Preference number: 4 (lower is better)
Translates to: IQWISQQVFSTVIHNILPFTTIS*ARAMLV
Trigger: CACCAACATGGCTCTAGCCCATGAAATTGTAGTAAA...GGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAAATCCACTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CCA 90 bp ATAGACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTTTACTACAATTTCATaGGCTAGAGCCATGTTGGTG +
Preference number: 4 (lower is better)
Translates to: IDMYYIAIFQCNIRVQNRFTTIS*ARAMLV
Trigger: CACCAACATGGCTCTAGCCCATGAAATTGTAGTAAA...CCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CCA 90 bp GACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATAGAACAGGTATTCTGTaGCTAGTGAGTAATACTGCT +
Preference number: 4 (lower is better)
Translates to: DMYYIAIFQCNIRVQNRYRTGIL*LVSNTA
Trigger: AGCAGTATTACTCACTAGCCACAGAATACCTGTTCT...ATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR TCA 90 bp TTCAATCATCACATCTGTGTATTGTCTCAGGGTCAATTTTTCAGTAAGAATTCCTTGACTTTCAAGGCTTaGAAGTCAAAGACTTTCCTT +
Preference number: 4 (lower is better)
Translates to: FNHHICVLSQGQFFSKNSLTFKA*KSKTFL
Trigger: AAGGAAAGTCTTTGACTTTCAAGCCTTGAAAGTCAA...GGAATTCTTACTGAAAAATTGACCCTGAGACAATACACAGATGTGATGATTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR GCA 90 bp TTCTTATCCAATCTCAGGGAAGCTGTAGGATCTTATGCAGAAAATCAAAGAATATTGTATTGTCATTGGTaGCTCTATCACATGGTTCTT +
Preference number: 4 (lower is better)
Translates to: FLSNLREAVGSYAENQRILYCHW*LYHMVL
Trigger: AAGAACCATGTGATAGAGGCACCAATGACAATACAA...TATTCTTTGATTTTCTGCATAAGATCCTACAGCTTCCCTGAGATTGGATAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS GCA 90 bp GCGGAAGCCGGAGGGATGCGCGGCAGGCAGGGGCGGTTCAGCCTCTaGCCCTCCGAGGCCGCATCCCTCGCCACGCGGCGGGCGGTCCTC +
Preference number: 5 (lower is better)
Translates to: AEAGGMRGRQGRFSL*PSEAASLATRRAVL
Trigger: GAGGACCGCCCGCCGCGTGGCGAGGGATGCGGCCTCGGAGGGGCAGAGGCTGAACCGCCCCTGCCTGCCGCGCATCCCTCCGGCTTCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334274.9
ENST00000527661.5
ENST00000530171.5
ENST00000530419.5
ENST00000532687.5
CDS GCA 90 bp CTCCCCAGCAGAAAGGGTCTGCCACGGAGTCGGCGTTCTCCCTCCTaGCGCTCCCGCCGCGAATCAGGCGCGGGCTGGCGCCGCGGCGGA +
Preference number: 5 (lower is better)
Translates to: LPSRKGLPRSRRSPS*RSRRESGAGWRRGG
Trigger: TCCGCCGCGGCGCCAGCCCGCGCCTGATTCGCGGCGGGAGCGGCAGGAGGGAGAACGCCGACTCCGTGGCAGACCCTTTCTGCTGGGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530419.5
CDS GCA 90 bp CCCCCGACATCCCGGGATGGGATCCGACGGGAAGAGGCGAAGAGATaGCTGCGACTTGGACCGCGCGCCTCCCGGACGGGCCCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: PPTSRDGIRREEAKR*LRLGPRASRTGPAS
Trigger: GCTGGCGGGGCCCGTCCGGGAGGCGCGCGGTCCAAGTCGCAGGCATCTCTTCGCCTCTTCCCGTCGGATCCCATCCCGGGATGTCGGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528107.5
ENST00000602733.5
CDS GCA 90 bp CGACATCCCGGGATGGGATCCGACGGGAAGAGGCGAAGAGATGCCTaGGACTTGGACCGCGCGCCTCCCGGACGGGCCCCGCCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: RHPGMGSDGKRRRDA*DLDRAPPGRAPPAS
Trigger: GGAGGCTGGCGGGGCCCGTCCGGGAGGCGCGCGGTCCAAGTCGCAGGCATCTCTTCGCCTCTTCCCGTCGGATCCCATCCCGGGATGTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528107.5
ENST00000602733.5
CDS CCA 90 bp GCATCCCTCGCCACGCGGCGGGCGGTCCTCCCAGCCCGACTCGGGTaGGCAGCGGTCAGAGCGGCCGCTTCTCAGCATCAGGAAGGAGGA +
Preference number: 5 (lower is better)
Translates to: ASLATRRAVLPARLG*AAVRAAASQHQEGG
Trigger: TCCTCCTTCCTGATGCTGAGAAGCGGCCGCTCTGACCGCTGCCCACCCGAGTCGGGCTGGGAGGACCGCCCGCCGCGTGGCGAGGGATGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000527661.5
ENST00000530419.5
ENST00000532687.5
CDS GCA 90 bp TTAAGTTTATTCACTTTCCTGCCACGGAGTCGGCGTTCTCCCTCCTaGCGCTCCCGCCGCGAATCAGGCGCGGGCTGGCGCCGCGGCGGA +
Preference number: 5 (lower is better)
Translates to: LSLFTFLPRSRRSPS*RSRRESGAGWRRGG
Trigger: TCCGCCGCGGCGCCAGCCCGCGCCTGATTCGCGGCGGGAGCGGCAGGAGGGAGAACGCCGACTCCGTGGCAGGAAAGTGAATAAACTTAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000527661.5
ENST00000530171.5
ENST00000532687.5
CDS TCA 90 bp GCGGGAGGGTCTTTCCCCTGCTTGCCGAAGGGGTTCAGTAAGCGGTaGCTCGCAGCTGGGCGGCGCCGTGTTTCCTCAGGGAGAGGTGGA +
Preference number: 5 (lower is better)
Translates to: AGGSFPCLPKGFSKR*LAAGRRRVSSGRGG
Trigger: TCCACCTCTCCCTGAGGAAACACGGCGCCGCCCAGCTGCGAGTCACCGCTTACTGAACCCCTTCGGCAAGCAGGGGAAAGACCCTCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530419.5
ENST00000532687.5
CDS CCA 90 bp TTCCAAGAAGACGGTCATCCGTCGGCGCTGCACGCGGGCCTAGGCTaGACACAAGAGGCTCCCCAGCAGAAAGGGTCTGCCACGGAGTCG +
Preference number: 5 (lower is better)
Translates to: FQEDGHPSALHAGLG*TQEAPQQKGSATES
Trigger: CGACTCCGTGGCAGACCCTTTCTGCTGGGGAGCCTCTTGTGTCCAGCCTAGGCCCGCGTGCAGCGCCGACGGATGACCGTCTTCTTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530419.5
CDS CCA 90 bp TGCCAAGAAGACGGTCATCCGTCGGCGCTGCACGCGGGCCTAGGCTaGACACAAGAGGCTCCCCAGCAGAAAGGGTCTTTCGGCAAAAGA +
Preference number: 5 (lower is better)
Translates to: CQEDGHPSALHAGLG*TQEAPQQKGSFGKR
Trigger: TCTTTTGCCGAAAGACCCTTTCTGCTGGGGAGCCTCTTGTGTCCAGCCTAGGCCCGCGTGCAGCGCCGACGGATGACCGTCTTCTTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432887.5
ENST00000528107.5
ENST00000528898.1
ENST00000602733.5
CDS CCA 90 bp TTCCAAGAAGACGGTCATCCGTCGGCGCTGCACGCGGGCCTAGGCTaGACACAAGAGGCTCCCCAGCAGAAAGGGTCTTTCGGCAAAAGA +
Preference number: 5 (lower is better)
Translates to: FQEDGHPSALHAGLG*TQEAPQQKGSFGKR
Trigger: TCTTTTGCCGAAAGACCCTTTCTGCTGGGGAGCCTCTTGTGTCCAGCCTAGGCCCGCGTGCAGCGCCGACGGATGACCGTCTTCTTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531632.6
CDS-3UTR CAA 90 bp TCCCCCAGGGACTGTGGGCAATGGCTTCTGATGACCCGAGGCAAGGTAGGTTTCGGAGGATCCTCGCACTaGCCAAGAAGACGGTCATCC +
Preference number: 5 (lower is better)
Translates to: SPRDCGQWLLMTRGKVGFGGSSH*PRRRSS
Trigger: GGATGACCGTCTTCTTGGCAAGTGCGAGGATCCTCC...GAAACCTACCTTGCCTCGGGTCATCAGAAGCCATTGCCCACAGTCCCTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CAA 90 bp AGGCAGCTGCTCACCTCCAGGCACACCTTCTCCCCGATGGTAGTGAGGACGTCCATGAATTCTGCCAGCTaGGAAATGTCTAGCGCCCCA +
Preference number: 5 (lower is better)
Translates to: RQLLTSRHTFSPMVVRTSMNSAS*EMSSAP
Trigger: TGGGGCGCTAGACATTTCCAAGCTGGCAGAATTCAT...GGACGTCCTCACTACCATCGGGGAGAAGGTGTGCCTGGAGGTGAGCAGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CAA 90 bp CATGGCTTGGTCTCTTTTGCGCTTGGATGGCCGTCAGCTCAGCATGAGGCATCTTGGTCTCTTTTGCGCTaGGATGGCCGTCAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: HGLVSFALGWPSAQHEASWSLLR*DGRQLS
Trigger: GCTGAGCTGACGGCCATCCAAGCGCAAAAGAGACCA...AGATGCCTCATGCTGAGCTGACGGCCATCCAAGCGCAAAAGAGACCAAGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CAA 90 bp CAGGATTGCATCGTAGTAGGGACAGAAGACCATCTTGTTATAGTTGACCAGGCGAGAGATGCCTGCGACTaGGACCGCGCGCCTCCCGGA +
Preference number: 5 (lower is better)
Translates to: QDCIVVGTEDHLVIVDQARDACD*DRAPPG
Trigger: TCCGGGAGGCGCGCGGTCCAAGTCGCAGGCATCTCT...CGCCTGGTCAACTATAACAAGATGGTCTTCTGTCCCTACTACGATGCAATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CAA 90 bp GGATGGCCGTCAGCTCAGCATGAGGCATCTGAAAGAACTACCCAGATTGCAGAATGGGCTAGAGCCATGTaGGTGACACCTCTCGCTGTC +
Preference number: 5 (lower is better)
Translates to: GWPSAQHEASERTTQIAEWARAM*VTPLAV
Trigger: GACAGCGAGAGGTGTCACCAACATGGCTCTAGCCCA...TTCTGCAATCTGGGTAGTTCTTTCAGATGCCTCATGCTGAGCTGACGGCCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CAA 90 bp GATTCGAGATTCCATGATCCTGCGAATGGGGTCATCGGGACTGGCCACGGCCTGGGATCTTACTCAGGATaGCATCGTAGTAGGGACAGA +
Preference number: 5 (lower is better)
Translates to: DSRFHDPANGVIGTGHGLGSYSG*HRSRDR
Trigger: TCTGTCCCTACTACGATGCAATCCTGAGTAAGATCC...CAGGCCGTGGCCAGTCCCGATGACCCCATTCGCAGGATCATGGAATCTCGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS CCA 90 bp TTCAGTGTCCTCCTCTGTAAAACACAGCTACCTACCTGCTCGGTTTaGGGGGAGATGAAACGAGGGATTGTGCACGGCAGGCCTTCTACA +
Preference number: 5 (lower is better)
Translates to: FSVLLCKTQLPTCSV*GEMKRGIVHGRPST
Trigger: TGTAGAAGGCCTGCCGTGCACAATCCCTCGTTTCATCTCCCCCCAAACCGAGCAGGTAGGTAGCTGTGTTTTACAGAGGAGGACACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CAA 90 bp TCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGAAGATGAAGTTGAGCACGGTCTCCTaGTCCGTGGTGAAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: SGETRPSKGPTRIQMKMKLSTVS*SVVKGE
Trigger: CTCTCCCTTCACCACGGACAAGGAGACCGTGCTCAA...CTTCATCTTCATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CAA 90 bp GTCTCTTTTGCGCTTGGATGGCCGTCAGCTCAGCATGAGGCATCTGAAAGAACTATGGCTTGGTCTCTTTaGCGCTTGGATGGCCGTCAG +
Preference number: 5 (lower is better)
Translates to: VSFALGWPSAQHEASERTMAWSL*RLDGRQ
Trigger: CTGACGGCCATCCAAGCGCAAAAGAGACCAAGCCAT...AGTTCTTTCAGATGCCTCATGCTGAGCTGACGGCCATCCAAGCGCAAAAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CAA 90 bp CAGGATTGCATCGTAGTAGGGACAGAAGACCATCTTGTTATAGTTGACCAGGCGTGGGCTAGAGCCATGTaGGTGACACCTCTCGCTGTC +
Preference number: 5 (lower is better)
Translates to: QDCIVVGTEDHLVIVDQAWARAM*VTPLAV
Trigger: GACAGCGAGAGGTGTCACCAACATGGCTCTAGCCCA...CGCCTGGTCAACTATAACAAGATGGTCTTCTGTCCCTACTACGATGCAATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS CCA 90 bp CTGGGAGGCTGGGCGTTGGTTTCAGACATACCTGGGCCCCAATTCTaGCTCTTTACTAGCTGTGTAACTTCAGTGTCCTCCTCTGTAAAA +
Preference number: 5 (lower is better)
Translates to: LGGWALVSDIPGPQF*LFTSCVTSVSSSVK
Trigger: TTTTACAGAGGAGGACACTGAAGTTACACAGCTAGTAAAGAGCCAGAATTGGGGCCCAGGTATGTCTGAAACCAACGCCCAGCCTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CAA 90 bp GGATGGCCGTCAGCTCAGCATGAGGCATCTGAAAGAACTACCCAGATTGCAGAAATGAATTCTGCCAGCTaGGAAATGTCTAGCGCCCCA +
Preference number: 5 (lower is better)
Translates to: GWPSAQHEASERTTQIAEMNSAS*EMSSAP
Trigger: TGGGGCGCTAGACATTTCCAAGCTGGCAGAATTCAT...TTCTGCAATCTGGGTAGTTCTTTCAGATGCCTCATGCTGAGCTGACGGCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CAA 90 bp ATCTTCACAATCATCTTGAGTTTCTCAGCAAAGTCGGCCTGGCTGGAAATTCCTCTGGGAGGCTGGGCGTaGGTTTCAGACATACCTGGG +
Preference number: 5 (lower is better)
Translates to: IFTIILSFSAKSAWLEIPLGGWA*VSDIPG
Trigger: CCCAGGTATGTCTGAAACCAACGCCCAGCCTCCCAG...AGGAATTTCCAGCCAGGCCGACTTTGCTGAGAAACTCAAGATGATTGTGAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CAA 90 bp AGGGAAGCTGTAGGATCTTATGCAGAAAATCAAAGAATAACAGCTGTCCGAAGAGCCTGGATCTGGCCCTaGAGCACGGTCTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: REAVGSYAENQRITAVRRAWIWP*STVSLS
Trigger: GGACAAGGAGACCGTGCTCAAGGGCCAGATCCAGGC...TCTTCGGACAGCTGTTATTCTTTGATTTTCTGCATAAGATCCTACAGCTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CAA 90 bp GGATGGCCGTCAGCTCAGCATGAGGCATCTGAAAGAACTACCCAGATTGCAGAAGGATCTTACTCAGGATaGCATCGTAGTAGGGACAGA +
Preference number: 5 (lower is better)
Translates to: GWPSAQHEASERTTQIAEGSYSG*HRSRDR
Trigger: TCTGTCCCTACTACGATGCAATCCTGAGTAAGATCC...TTCTGCAATCTGGGTAGTTCTTTCAGATGCCTCATGCTGAGCTGACGGCCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CAA 90 bp CGAGGTTGTGTTAATCCGATGATCAACATTGAACAGCTCTGGAGAGACAAGGCCATGAATTCTGCCAGCTaGGAAATGTCTAGCGCCCCA +
Preference number: 5 (lower is better)
Translates to: RGCVNPMINIEQLWRDKAMNSAS*EMSSAP
Trigger: TGGGGCGCTAGACATTTCCAAGCTGGCAGAATTCAT...GGCCTTGTCTCTCCAGAGCTGTTCAATGTTGATCATCGGATTAACACAACCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CAA 90 bp TTGAACAGCTCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGCAAAGTCCAGGGAATTaGGTTGCCTCTCCAAAATCT +
Preference number: 5 (lower is better)
Translates to: LNSSGETRPSKGPTRIQMQSPGN*VASPKS
Trigger: AGATTTTGGAGAGGCAACCAAATTCCCTGGACTTTG...CATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGAGCTGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CAA 90 bp ATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATTCTGTGGCTAGTGCCTGGATCTGGCCCTaGAGCACGGTCTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: IAIFQCNIRVQNRYSVASAWIWP*STVSLS
Trigger: GGACAAGGAGACCGTGCTCAAGGGCCAGATCCAGGC...ACTAGCCACAGAATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp CGAGCAGGTGCACACAGTGTCCCCATCATGCCAATAATGAATTCTGCCAGCTTGCACGAACCATTTAATTaGCTTATATCGCGCGCATCC +
Preference number: 5 (lower is better)
Translates to: RAGAHSVPIMPIMNSASLHEPFN*LISRAS
Trigger: GGATGCGCGCGATATAAGCAAATTAAATGGTTCGTG...CAAGCTGGCAGAATTCATTATTGGCATGATGGGGACACTGTGTGCACCTGCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CAA 90 bp AGGGAAGCTGTAGGATCTTATGCAGAAAATCAAAGAATAACAGCTGTCCGAAGATGGGCTAGAGCCATGTaGGTGACACCTCTCGCTGTC +
Preference number: 5 (lower is better)
Translates to: REAVGSYAENQRITAVRRWARAM*VTPLAV
Trigger: GACAGCGAGAGGTGTCACCAACATGGCTCTAGCCCA...TCTTCGGACAGCTGTTATTCTTTGATTTTCTGCATAAGATCCTACAGCTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CAA 90 bp TTAACTTCCTCATCTCGAGCAGGTGCACACAGTGTCCCCATCATGCCAATAATGGTCCAGGGAATTTGGTaGCCTCTCCAAAATCTCTTG +
Preference number: 5 (lower is better)
Translates to: LTSSSRAGAHSVPIMPIMVQGIW*PLQNLL
Trigger: CAAGAGATTTTGGAGAGGCAACCAAATTCCCTGGAC...CATTATTGGCATGATGGGGACACTGTGTGCACCTGCTCGAGATGAGGAAGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CAA 90 bp AAAATGGCAATAAGACGTTATATAGCCCTTCTAACAAAAATACCAGAAGGGAGGGCCTGGATCTGGCCCTaGAGCACGGTCTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: KMAIRRYIALLTKIPEGRAWIWP*STVSLS
Trigger: GGACAAGGAGACCGTGCTCAAGGGCCAGATCCAGGC...CCTCCCTTCTGGTATTTTTGTTAGAAGGGCTATATAACGTCTTATTGCCATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CAA 90 bp TTGAACAGCTCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGTGTCCAGGATTCCTTTaGCCTCAAGTGGTATGTTTA +
Preference number: 5 (lower is better)
Translates to: LNSSGETRPSKGPTRIQMCPGFL*PQVVCL
Trigger: TAAACATACCACTTGAGGCAAAAGGAATCCTGGACA...CATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGAGCTGTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CAA 90 bp CGAGCAGGTGCACACAGTGTCCCCATCATGCCAATAATGAATTCTGCCAGCTTGAGTGGCATTATGAAATaGCCCAGGGAATATAGCAGA +
Preference number: 5 (lower is better)
Translates to: RAGAHSVPIMPIMNSASLSGIMK*PREYSR
Trigger: TCTGCTATATTCCCTGGGCAATTTCATAATGCCACT...CAAGCTGGCAGAATTCATTATTGGCATGATGGGGACACTGTGTGCACCTGCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CAA 90 bp TCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGAAGATGAAGCTACTGATAGCAAAGTaGGCCATGTCCACTTTCATT +
Preference number: 5 (lower is better)
Translates to: SGETRPSKGPTRIQMKMKLLIAK*AMSTFI
Trigger: AATGAAAGTGGACATGGCCAACTTTGCTATCAGTAG...CTTCATCTTCATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CAA 90 bp TCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCCCCCAGGATGGTCAGTaGTTCCAGCTGCAACTGGAG +
Preference number: 5 (lower is better)
Translates to: STSLFNSDTQYSSLWNRCPQDGQ*FQLQLE
Trigger: CTCCAGTTGCAGCTGGAACAACTGACCATCCTGGGG...GCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp CAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTCCCCAGGATGGTCAGTaGTTCCAGCTGCAACTGGAG +
Preference number: 5 (lower is better)
Translates to: QQVFSTVIHNILPFGIGAPQDGQ*FQLQLE
Trigger: CTCCAGTTGCAGCTGGAACAACTGACCATCCTGGGG...AGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp CCACTTCAGAAGCTTCAGGTAAGCGTAATTCTGGACAGCAACAGGGCTCAGCCTATCTTCACAATCATCTaGAGTTTCTCAGCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: PLQKLQVSVILDSNRAQPIFTII*SFSAKS
Trigger: CGACTTTGCTGAGAAACTCAAGATGATTGTGAAGAT...AGGCTGAGCCCTGTTGCTGTCCAGAATTACGCTTACCTGAAGCTTCTGAAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CAA 90 bp TCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTTGAGCACGGTCTCCTaGTCCGTGGTGAAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: STSLFNSDTQYSSLWNRCLSTVS*SVVKGE
Trigger: CTCTCCCTTCACCACGGACAAGGAGACCGTGCTCAA...GCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp GAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAACATGCCTGGATCTGGCCCTaGAGCACGGTCTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: ESVLLNRHVLYSHFPMQHAWIWP*STVSLS
Trigger: GGACAAGGAGACCGTGCTCAAGGGCCAGATCCAGGC...ATGTTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp GTGGATTTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGGAGGTCCCAGCCTCCTaGGAAGGACATGATGGGGGA +
Preference number: 5 (lower is better)
Translates to: VDFSTSLFNSDTQYSSLWEVPAS*EGHDGG
Trigger: TCCCCCATCATGTCCTTCCAAGGAGGCTGGGACCTC...CCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAAATCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CAA 90 bp ATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATTCTGTGGCTAGTTGGTCTCTTTTGCGCTaGGATGGCCGTCAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: IAIFQCNIRVQNRYSVASWSLLR*DGRQLS
Trigger: GCTGAGCTGACGGCCATCCAAGCGCAAAAGAGACCA...ACTAGCCACAGAATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CAA 90 bp GTCTCTTTTGCGCTTGGATGGCCGTCAGCTCAGCATGAGGCATCTGAAAGAACTCATCACATCTGTGTATaGTCTCAGGGTCAATTTTTC +
Preference number: 5 (lower is better)
Translates to: VSFALGWPSAQHEASERTHHICV*SQGQFF
Trigger: GAAAAATTGACCCTGAGACAATACACAGATGTGATG...AGTTCTTTCAGATGCCTCATGCTGAGCTGACGGCCATCCAAGCGCAAAAGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CAA 90 bp TTGAACAGCTCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGGGAAACAAAGTTGTATaGTCATTGGTGCCTCTATCA +
Preference number: 5 (lower is better)
Translates to: LNSSGETRPSKGPTRIQMGNKVV*SLVPLS
Trigger: TGATAGAGGCACCAATGACAATACAACTTTGTTTCC...CATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGAGCTGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CAA 90 bp TCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGAAGATGAAGCCTGCTTCATTTACATaGGACTTGTCAAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: SGETRPSKGPTRIQMKMKPASFT*DLSRFS
Trigger: TGAAAACCTTGACAAGTCCAATGTAAATGAAGCAGG...CTTCATCTTCATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CAA 90 bp CTAGTGAGTAATACTGCTGCTGTAGGGTGCATACACGTTAGGATCGGACGAGGACCTGCTTCATTTACATaGGACTTGTCAAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: LVSNTAAVGCIHVRIGRGPASFT*DLSRFS
Trigger: TGAAAACCTTGACAAGTCCAATGTAAATGAAGCAGG...TCCTCGTCCGATCCTAACGTGTATGCACCCTACAGCAGCAGTATTACTCACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CAA 90 bp TTCCCTTTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCATGGGCTAGAGCCATGTaGGTGACACCTCTCGCTGTC +
Preference number: 5 (lower is better)
Translates to: FPLESVLLNRHVLYSHFPWARAM*VTPLAV
Trigger: GACAGCGAGAGGTGTCACCAACATGGCTCTAGCCCA...TGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTCCAAAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp GGATGGCCGTCAGCTCAGCATGAGGCATCTGAAAGAACTACCCAGATTGCAGAAATTTCTCCTACAAGTTaGATAGCATGGTCATATGCT +
Preference number: 5 (lower is better)
Translates to: GWPSAQHEASERTTQIAEISPTS*IAWSYA
Trigger: AGCATATGACCATGCTATCAAACTTGTAGGAGAAAT...TTCTGCAATCTGGGTAGTTCTTTCAGATGCCTCATGCTGAGCTGACGGCCATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CAA 90 bp GGATGGCCGTCAGCTCAGCATGAGGCATCTGAAAGAACTACCCAGATTGCAGAAGATAAGAGAGTCTCTTaGATTTCTCCTACAAGTTTG +
Preference number: 5 (lower is better)
Translates to: GWPSAQHEASERTTQIAEDKRVS*ISPTSL
Trigger: CAAACTTGTAGGAGAAATCAAAGAGACTCTCTTATC...TTCTGCAATCTGGGTAGTTCTTTCAGATGCCTCATGCTGAGCTGACGGCCATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CAA 90 bp TTGAACAGCTCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGGATAAGAGAGTCTCTTaGATTTCTCCTACAAGTTTG +
Preference number: 5 (lower is better)
Translates to: LNSSGETRPSKGPTRIQMDKRVS*ISPTSL
Trigger: CAAACTTGTAGGAGAAATCAAAGAGACTCTCTTATC...CATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGAGCTGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CAA 90 bp ATTCTGCCAGCTTGGAAATGTCTAGCGCCCCATTCTCTGCTTCCTGCTTTATCACTACTGATAGCAAAGTaGGCCATGTCCACTTTCATT +
Preference number: 5 (lower is better)
Translates to: ILPAWKCLAPHSLLPALSLLIAK*AMSTFI
Trigger: AATGAAAGTGGACATGGCCAACTTTGCTATCAGTAG...TGATAAAGCAGGAAGCAGAGAATGGGGCGCTAGACATTTCCAAGCTGGCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CAA 90 bp CCTACAAGTTTGATAGCATGGTCATATGCTGGGGGATCTTCACTTAGCTGCACACAAAGTCCAGGGAATTaGGTTGCCTCTCCAAAATCT +
Preference number: 5 (lower is better)
Translates to: PTSLIAWSYAGGSSLSCTQSPGN*VASPKS
Trigger: AGATTTTGGAGAGGCAACCAAATTCCCTGGACTTTG...TGTGCAGCTAAGTGAAGATCCCCCAGCATATGACCATGCTATCAAACTTGTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CAA 90 bp GTGGATTTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGCCCCAGGATGGTCAGTaGTTCCAGCTGCAACTGGAG +
Preference number: 5 (lower is better)
Translates to: VDFSTSLFNSDTQYSSLWPQDGQ*FQLQLE
Trigger: CTCCAGTTGCAGCTGGAACAACTGACCATCCTGGGG...CCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAAATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000531632.6
CDS-3UTR CAA 90 bp TCAAAGACTTTCCTTTCACTAGATCTCATAAGTCATAACTGCTCTCAACCAGATTTGAGCACGGTCTCCTaGTCCGTGGTGAAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: SKTFLSLDLISHNCSQPDLSTVS*SVVKGE
Trigger: CTCTCCCTTCACCACGGACAAGGAGACCGTGCTCAA...ATCTGGTTGAGAGCAGTTATGACTTATGAGATCTAGTGAAAGGAAAGTCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CAA 90 bp TTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAAGAGGTCCCAGCCTCCTaGGAAGGACATGATGGGGGA +
Preference number: 5 (lower is better)
Translates to: LESVLLNRHVLYSHFPMQEVPAS*EGHDGG
Trigger: TCCCCCATCATGTCCTTCCAAGGAGGCTGGGACCTC...TTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CAA 90 bp TCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGAAGATGAAGCTGGACCCAAAGAAATaGCCAAAAGATATCCATCTT +
Preference number: 5 (lower is better)
Translates to: SGETRPSKGPTRIQMKMKLDPKK*PKDIHL
Trigger: AAGATGGATATCTTTTGGCAATTTCTTTGGGTCCAG...CTTCATCTTCATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CAA 90 bp TCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGAAGATGAAGAAAGTTGTATTGTCATaGGTGCCTCTATCACATGGT +
Preference number: 5 (lower is better)
Translates to: SGETRPSKGPTRIQMKMKKVVLS*VPLSHG
Trigger: ACCATGTGATAGAGGCACCAATGACAATACAACTTT...CTTCATCTTCATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS TCA 90 bp GAAAGTCTCCATTTACTACAATTTCATGGGCTAGAGCCATGTTGGTaGCACCTCTCGCTGTCTCTAGAAGTTCTTCTACTGTCACAAAGC +
Preference number: 5 (lower is better)
Translates to: ESLHLLQFHGLEPCW*HLSLSLEVLLLSQS
Trigger: GCTTTGTGACAGTAGAAGAACTTCTAGAGACAGCGAGAGGTGTCACCAACATGGCTCTAGCCCATGAAATTGTAGTAAATGGAGACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000527661.5
ENST00000528107.5
ENST00000530419.5
ENST00000531632.6
ENST00000602733.5
CDS-3UTR CAA 90 bp TTCTTATCCAATCTCAGGGAAGCTGTAGGATCTTATGCAGAAAATCAAAGAATACCCCAGGATGGTCAGTaGTTCCAGCTGCAACTGGAG +
Preference number: 5 (lower is better)
Translates to: FLSNLREAVGSYAENQRIPQDGQ*FQLQLE
Trigger: CTCCAGTTGCAGCTGGAACAACTGACCATCCTGGGG...TATTCTTTGATTTTCTGCATAAGATCCTACAGCTTCCCTGAGATTGGATAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CAA 90 bp TTCAATCATCACATCTGTGTATTGTCTCAGGGTCAATTTTTCAGTAAGAATTCCTTGAGCACGGTCTCCTaGTCCGTGGTGAAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: FNHHICVLSQGQFFSKNSLSTVS*SVVKGE
Trigger: CTCTCCCTTCACCACGGACAAGGAGACCGTGCTCAA...GGAATTCTTACTGAAAAATTGACCCTGAGACAATACACAGATGTGATGATTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CAA 90 bp AAAATGGCAATAAGACGTTATATAGCCCTTCTAACAAAAATACCAGAAGGGAGGATGGCTTGGTCTCTTTaGCGCTTGGATGGCCGTCAG +
Preference number: 5 (lower is better)
Translates to: KMAIRRYIALLTKIPEGRMAWSL*RLDGRQ
Trigger: CTGACGGCCATCCAAGCGCAAAAGAGACCAAGCCAT...CCTCCCTTCTGGTATTTTTGTTAGAAGGGCTATATAACGTCTTATTGCCATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CAA 90 bp TCTGGAGAGACAAGGCCGTCAAAAGGCCCAACGAGGATTCAGATGAAGATGAAGAAAAGAGACAACGCTTaGTTACAAGGTTCTTGGAAA +
Preference number: 5 (lower is better)
Translates to: SGETRPSKGPTRIQMKMKKRDNA*LQGSWK
Trigger: TTTCCAAGAACCTTGTAACAAAGCGTTGTCTCTTTT...CTTCATCTTCATCTGAATCCTCGTTGGGCCTTTTGACGGCCTTGTCTCTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS GCA 90 bp ACAAGTTTGATAGCATGGTCATATGCTGGGGGATCTTCACTTAGCTaGACACTCAAGCAATCCCAAAACGCTTTATGTACAATCTCCTTT +
Preference number: 5 (lower is better)
Translates to: TSLIAWSYAGGSSLS*TLKQSQNALCTISF
Trigger: AAAGGAGATTGTACATAAAGCGTTTTGGGATTGCTTGAGTGTGCAGCTAAGTGAAGATCCCCCAGCATATGACCATGCTATCAAACTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000527661.5
ENST00000528107.5
ENST00000530419.5
ENST00000531632.6
CDS-3UTR CAA 90 bp CAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTGTTGTCCAGGGAATTTGGTaGCCTCTCCAAAATCTCTTG +
Preference number: 5 (lower is better)
Translates to: QVFSTVIHNILPFGIGAVVQGIW*PLQNLL
Trigger: CAAGAGATTTTGGAGAGGCAACCAAATTCCCTGGAC...AACAGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp TCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCGTCCAGGGAATTTGGTaGCCTCTCCAAAATCTCTTG +
Preference number: 5 (lower is better)
Translates to: STSLFNSDTQYSSLWNRCVQGIW*PLQNLL
Trigger: CAAGAGATTTTGGAGAGGCAACCAAATTCCCTGGAC...GCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp GACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATATGAATTCTGCCAGCTaGGAAATGTCTAGCGCCCCA +
Preference number: 5 (lower is better)
Translates to: DMYYIAIFQCNIRVQNRYMNSAS*EMSSAP
Trigger: TGGGGCGCTAGACATTTCCAAGCTGGCAGAATTCAT...ATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp TTCCCTTTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAGGATCTTACTCAGGATaGCATCGTAGTAGGGACAGA +
Preference number: 5 (lower is better)
Translates to: FPLESVLLNRHVLYSHFPGSYSG*HRSRDR
Trigger: TCTGTCCCTACTACGATGCAATCCTGAGTAAGATCC...TGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTCCAAAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp AGGGAAGCTGTAGGATCTTATGCAGAAAATCAAAGAATAACAGCTGTCCGAAGAGGACTCATATCAGTATaGCTGGACCCAAAGAAATTG +
Preference number: 5 (lower is better)
Translates to: REAVGSYAENQRITAVRRGLISV*LDPKKL
Trigger: CAATTTCTTTGGGTCCAGCAATACTGATATGAGTCC...TCTTCGGACAGCTGTTATTCTTTGATTTTCTGCATAAGATCCTACAGCTTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CAA 90 bp CAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTGTTCTACTGATAGCAAAGTaGGCCATGTCCACTTTCATT +
Preference number: 5 (lower is better)
Translates to: QVFSTVIHNILPFGIGAVLLIAK*AMSTFI
Trigger: AATGAAAGTGGACATGGCCAACTTTGCTATCAGTAG...AACAGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp GAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAACATGTCCAGGGAATTTGGTaGCCTCTCCAAAATCTCTTG +
Preference number: 5 (lower is better)
Translates to: ESVLLNRHVLYSHFPMQHVQGIW*PLQNLL
Trigger: CAAGAGATTTTGGAGAGGCAACCAAATTCCCTGGAC...ATGTTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp TTCTTATCCAATCTCAGGGAAGCTGTAGGATCTTATGCAGAAAATCAAAGAATAGTCCAGGGAATTTGGTaGCCTCTCCAAAATCTCTTG +
Preference number: 5 (lower is better)
Translates to: FLSNLREAVGSYAENQRIVQGIW*PLQNLL
Trigger: CAAGAGATTTTGGAGAGGCAACCAAATTCCCTGGAC...TATTCTTTGATTTTCTGCATAAGATCCTACAGCTTCCCTGAGATTGGATAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CAA 90 bp AAAATGGCAATAAGACGTTATATAGCCCTTCTAACAAAAATACCAGAAGGGAGGCAAAGTCCAGGGAATTaGGTTGCCTCTCCAAAATCT +
Preference number: 5 (lower is better)
Translates to: KMAIRRYIALLTKIPEGRQSPGN*VASPKS
Trigger: AGATTTTGGAGAGGCAACCAAATTCCCTGGACTTTG...CCTCCCTTCTGGTATTTTTGTTAGAAGGGCTATATAACGTCTTATTGCCATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CAA 90 bp TTCTCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGCAAAGTCCAGGGAATTaGGTTGCCTCTCCAAAATCT +
Preference number: 5 (lower is better)
Translates to: FSTSLFNSDTQYSSLWNRQSPGN*VASPKS
Trigger: AGATTTTGGAGAGGCAACCAAATTCCCTGGACTTTG...CCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp GAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAACATGGATCTTACTCAGGATaGCATCGTAGTAGGGACAGA +
Preference number: 5 (lower is better)
Translates to: ESVLLNRHVLYSHFPMQHGSYSG*HRSRDR
Trigger: TCTGTCCCTACTACGATGCAATCCTGAGTAAGATCC...ATGTTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp CAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTGTTAGTTTATTCACTTTCTaGCCAAGAAGACGGTCATCC +
Preference number: 5 (lower is better)
Translates to: QVFSTVIHNILPFGIGAVSLFTF*PRRRSS
Trigger: GGATGACCGTCTTCTTGGCAAGAAAGTGAATAAACT...AACAGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432887.5
CDS-3UTR CAA 90 bp GTTTATCAACGAGGTTGTGTTAATCCGATGATCAACATTGAACAGCTCTGGAGATTCTTGGAAACAAAGTaGTATTGTCATTGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: VYQRGCVNPMINIEQLWRFLETK*YCHWCL
Trigger: GAGGCACCAATGACAATACAACTTTGTTTCCAAGAA...TCTCCAGAGCTGTTCAATGTTGATCATCGGATTAACACAACCTCGTTGATAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS GCA 90 bp TACAATTCCAAGGACTCATATCAGTATTGCTGGACCCAAAGAAATTaGCAAAAGATATCCATCTTTTTCTCAGGATTGCATCGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: YNSKDSYQYCWTQRN*QKISIFFSGLHRSR
Trigger: CCTACTACGATGCAATCCTGAGAAAAAGATGGATATCTTTTGGCAATTTCTTTGGGTCCAGCAATACTGATATGAGTCCTTGGAATTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS CCA 90 bp TGGGATAATCAGTCCTACAATTCCAAGGACTCATATCAGTATTGCTaGACCCAAAGAAATTGCCAAAAGATATCCATCTTTTTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: WDNQSYNSKDSYQYC*TQRNCQKISIFFSG
Trigger: TCCTGAGAAAAAGATGGATATCTTTTGGCAATTTCTTTGGGTCCAGCAATACTGATATGAGTCCTTGGAATTGTAGGACTGATTATCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CAA 90 bp CAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTGTTCCTGCTTCATTTACATaGGACTTGTCAAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: QVFSTVIHNILPFGIGAVPASFT*DLSRFS
Trigger: TGAAAACCTTGACAAGTCCAATGTAAATGAAGCAGG...AACAGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp GTTTATCAACGAGGTTGTGTTAATCCGATGATCAACATTGAACAGCTCTGGAGAATTTCTCCTACAAGTTaGATAGCATGGTCATATGCT +
Preference number: 5 (lower is better)
Translates to: VYQRGCVNPMINIEQLWRISPTS*IAWSYA
Trigger: AGCATATGACCATGCTATCAAACTTGTAGGAGAAAT...TCTCCAGAGCTGTTCAATGTTGATCATCGGATTAACACAACCTCGTTGATAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CAA 90 bp TTCCTGCTTTATCAGATCCAGATCCAAGACTTCTGTTATCTGGTTTCTCAGTCTGATAAGAGAGTCTCTTaGATTTCTCCTACAAGTTTG +
Preference number: 5 (lower is better)
Translates to: FLLYQIQIQDFCYLVSQSDKRVS*ISPTSL
Trigger: CAAACTTGTAGGAGAAATCAAAGAGACTCTCTTATC...AGACTGAGAAACCAGATAACAGAAGTCTTGGATCTGGATCTGATAAAGCAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CAA 90 bp GAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAACATCAAAGTCCAGGGAATTaGGTTGCCTCTCCAAAATCT +
Preference number: 5 (lower is better)
Translates to: ESVLLNRHVLYSHFPMQHQSPGN*VASPKS
Trigger: AGATTTTGGAGAGGCAACCAAATTCCCTGGACTTTG...ATGTTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp CAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTGTTATCTTCACAATCATCTaGAGTTTCTCAGCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: QVFSTVIHNILPFGIGAVIFTII*SFSAKS
Trigger: CGACTTTGCTGAGAAACTCAAGATGATTGTGAAGAT...AACAGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp ATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATTCTGTGGCTAGTATCTTCACAATCATCTaGAGTTTCTCAGCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: IAIFQCNIRVQNRYSVASIFTII*SFSAKS
Trigger: CGACTTTGCTGAGAAACTCAAGATGATTGTGAAGAT...ACTAGCCACAGAATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp ATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATTCTGTGGCTAGTATTTCTCCTACAAGTTaGATAGCATGGTCATATGCT +
Preference number: 5 (lower is better)
Translates to: IAIFQCNIRVQNRYSVASISPTS*IAWSYA
Trigger: AGCATATGACCATGCTATCAAACTTGTAGGAGAAAT...ACTAGCCACAGAATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp TCAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCATTTCTCCTACAAGTTaGATAGCATGGTCATATGCT +
Preference number: 5 (lower is better)
Translates to: STSLFNSDTQYSSLWNRCISPTS*IAWSYA
Trigger: AGCATATGACCATGCTATCAAACTTGTAGGAGAAAT...GCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp ATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATTCTGTGGCTAGTGATAAGAGAGTCTCTTaGATTTCTCCTACAAGTTTG +
Preference number: 5 (lower is better)
Translates to: IAIFQCNIRVQNRYSVASDKRVS*ISPTSL
Trigger: CAAACTTGTAGGAGAAATCAAAGAGACTCTCTTATC...ACTAGCCACAGAATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp CAACAAGTCTTTTCAACAGTGATACACAATATTCTTCCCTTTGGAATCGGTGCTGATAAGAGAGTCTCTTaGATTTCTCCTACAAGTTTG +
Preference number: 5 (lower is better)
Translates to: QQVFSTVIHNILPFGIGADKRVS*ISPTSL
Trigger: CAAACTTGTAGGAGAAATCAAAGAGACTCTCTTATC...AGCACCGATTCCAAAGGGAAGAATATTGTGTATCACTGTTGAAAAGACTTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp GAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAACATCTACTGATAGCAAAGTaGGCCATGTCCACTTTCATT +
Preference number: 5 (lower is better)
Translates to: ESVLLNRHVLYSHFPMQHLLIAK*AMSTFI
Trigger: AATGAAAGTGGACATGGCCAACTTTGCTATCAGTAG...ATGTTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp TTCCCTTTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATCTTCACAATCATCTaGAGTTTCTCAGCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: FPLESVLLNRHVLYSHFPIFTII*SFSAKS
Trigger: CGACTTTGCTGAGAAACTCAAGATGATTGTGAAGAT...TGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTCCAAAGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp TCAAAGACTTTCCTTTCACTAGATCTCATAAGTCATAACTGCTCTCAACCAGATCATCACATCTGTGTATaGTCTCAGGGTCAATTTTTC +
Preference number: 5 (lower is better)
Translates to: SKTFLSLDLISHNCSQPDHHICV*SQGQFF
Trigger: GAAAAATTGACCCTGAGACAATACACAGATGTGATG...ATCTGGTTGAGAGCAGTTATGACTTATGAGATCTAGTGAAAGGAAAGTCTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334274.9
ENST00000432887.5
CDS-3UTR CAA 90 bp TTCTTATCCAATCTCAGGGAAGCTGTAGGATCTTATGCAGAAAATCAAAGAATAATCTTTTTCTCAGGATaGCATCGTAGTAGGGACAGA +
Preference number: 5 (lower is better)
Translates to: FLSNLREAVGSYAENQRIIFFSG*HRSRDR
Trigger: TCTGTCCCTACTACGATGCAATCCTGAGAAAAAGAT...TATTCTTTGATTTTCTGCATAAGATCCTACAGCTTCCCTGAGATTGGATAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS-3UTR CAA 90 bp GACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATACCCACAAGTATCTGTaGATAGAGATGAATCCCTAC +
Preference number: 5 (lower is better)
Translates to: DMYYIAIFQCNIRVQNRYTHKYL*IEMNPY
Trigger: GTAGGGATTCATCTCTATCAACAGATACTTGTGGGT...ATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS-3UTR CAA 90 bp TTGGAATCGGTGCTGTTAAATAGACATGTACTATATAGCCATTTTCCAATGCAACCTGCTTCATTTACATaGGACTTGTCAAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: LESVLLNRHVLYSHFPMQPASFT*DLSRFS
Trigger: TGAAAACCTTGACAAGTCCAATGTAAATGAAGCAGG...TTGCATTGGAAAATGGCTATATAGTACATGTCTATTTAACAGCACCGATTCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp GACATGTACTATATAGCCATTTTCCAATGCAACATTAGAGTACAGAACAGGTATCCTGCTTCATTTACATaGGACTTGTCAAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: DMYYIAIFQCNIRVQNRYPASFT*DLSRFS
Trigger: TGAAAACCTTGACAAGTCCAATGTAAATGAAGCAGG...ATACCTGTTCTGTACTCTAATGTTGCATTGGAAAATGGCTATATAGTACATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000528107.5
ENST00000531632.6
CDS-3UTR CAA 90 bp TTCTTATCCAATCTCAGGGAAGCTGTAGGATCTTATGCAGAAAATCAAAGAATAATCTTCACAATCATCTaGAGTTTCTCAGCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: FLSNLREAVGSYAENQRIIFTII*SFSAKS
Trigger: CGACTTTGCTGAGAAACTCAAGATGATTGTGAAGAT...TATTCTTTGATTTTCTGCATAAGATCCTACAGCTTCCCTGAGATTGGATAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS GCA 72 bp GGAGGGATGCGCGGCAGGCAGGGGCGGTTCAGCCTCTaGCCCTCCGAGGCCGCATCCCTCGCCACGCGGCGG +
Preference number: 6 (lower is better)
Translates to: GGMRGRQGRFSL*PSEAASLATRR
Trigger: CCGCCGCGTGGCGAGGGATGCGGCCTCGGAGGGGCAGAGGCTGAACCGCCCCTGCCTGCCGCGCATCCCTCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334274.9
ENST00000527661.5
ENST00000530171.5
ENST00000530419.5
ENST00000532687.5
CDS TCA 72 bp AGGACGCGGGCGCGCCGAGAGGACAGCCTCGAGGGGTaGGCTCCACCCGCCCGCGGACCCCGCCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: RTRARREDSLEG*APPARGPRLFL
Trigger: GAGGAAGAGGCGGGGTCCGCGGGCGGGTGGAGCTCACCCCTCGAGGCTGTCCTCTCGGCGCGCCCGCGTCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528107.5
ENST00000602733.5
CDS GCA 72 bp GCTCCACCCGCCCGCGGACCCCGCCTCTTCCTCGCCTaGCCCCGACATCCCGGGATGGGATCCGACGGGAAG +
Preference number: 6 (lower is better)
Translates to: APPARGPRLFLA*PRHPGMGSDGK
Trigger: CTTCCCGTCGGATCCCATCCCGGGATGTCGGGGGCAGGCGAGGAAGAGGCGGGGTCCGCGGGCGGGTGGAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528107.5
ENST00000602733.5
CDS CCA 72 bp GCCACGCGGCGGGCGGTCCTCCCAGCCCGACTCGGGTaGGCAGCGGTCAGAGCGGCCGCTTCTCAGCATCAG +
Preference number: 6 (lower is better)
Translates to: ATRRAVLPARLG*AAVRAAASQHQ
Trigger: CTGATGCTGAGAAGCGGCCGCTCTGACCGCTGCCCACCCGAGTCGGGCTGGGAGGACCGCCCGCCGCGTGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000527661.5
ENST00000530419.5
ENST00000532687.5
CDS TCA 72 bp CTGTCCCCCGGCGCCGGGAATCCCCTCCTCTGGCACTaGGCTCCACTCGCGCCCGGCGTCCGGATTCCGTTG +
Preference number: 6 (lower is better)
Translates to: LSPGAGNPLLWH*APLAPGVRIPL
Trigger: CAACGGAATCCGGACGCCGGGCGCGAGTGGAGCTCAGTGCCAGAGGAGGGGATTCCCGGCGCCGGGGGACAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432887.5
ENST00000528107.5
ENST00000528898.1
ENST00000531632.6
ENST00000602733.5
CDS GCA 72 bp GGGATGGGATCCGACGGGAAGAGGCGAAGAGATGCCTaGGACTTGGACCGCGCGCCTCCCGGACGGGCCCCG +
Preference number: 6 (lower is better)
Translates to: GMGSDGKRRRDA*DLDRAPPGRAP
Trigger: CGGGGCCCGTCCGGGAGGCGCGCGGTCCAAGTCGCAGGCATCTCTTCGCCTCTTCCCGTCGGATCCCATCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528107.5
ENST00000602733.5
CDS GCA 72 bp AGAAAGGGTCTGCCACGGAGTCGGCGTTCTCCCTCCTaGCGCTCCCGCCGCGAATCAGGCGCGGGCTGGCGC +
Preference number: 6 (lower is better)
Translates to: RKGLPRSRRSPS*RSRRESGAGWR
Trigger: GCGCCAGCCCGCGCCTGATTCGCGGCGGGAGCGGCAGGAGGGAGAACGCCGACTCCGTGGCAGACCCTTTCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530419.5
CDS GCA 72 bp TTCACTTTCCTGCCACGGAGTCGGCGTTCTCCCTCCTaGCGCTCCCGCCGCGAATCAGGCGCGGGCTGGCGC +
Preference number: 6 (lower is better)
Translates to: FTFLPRSRRSPS*RSRRESGAGWR
Trigger: GCGCCAGCCCGCGCCTGATTCGCGGCGGGAGCGGCAGGAGGGAGAACGCCGACTCCGTGGCAGGAAAGTGAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334274.9
ENST00000527661.5
ENST00000530171.5
ENST00000532687.5
CDS GCA 72 bp TCCCGGGATGGGATCCGACGGGAAGAGGCGAAGAGATaGCTGCGACTTGGACCGCGCGCCTCCCGGACGGGC +
Preference number: 6 (lower is better)
Translates to: SRDGIRREEAKR*LRLGPRASRTG
Trigger: GCCCGTCCGGGAGGCGCGCGGTCCAAGTCGCAGGCATCTCTTCGCCTCTTCCCGTCGGATCCCATCCCGGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528107.5
ENST00000602733.5
CDS CCA 72 bp GACGGTCATCCGTCGGCGCTGCACGCGGGCCTAGGCTaGACACAAGAGGCTCCCCAGCAGAAAGGGTCTGCC +
Preference number: 6 (lower is better)
Translates to: DGHPSALHAGLG*TQEAPQQKGSA
Trigger: GGCAGACCCTTTCTGCTGGGGAGCCTCTTGTGTCCAGCCTAGGCCCGCGTGCAGCGCCGACGGATGACCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530419.5
CDS CCA 72 bp GACGGTCATCCGTCGGCGCTGCACGCGGGCCTAGGCTaGACACAAGAGGCTCCCCAGCAGAAAGGGTCTTTC +
Preference number: 6 (lower is better)
Translates to: DGHPSALHAGLG*TQEAPQQKGSF
Trigger: GAAAGACCCTTTCTGCTGGGGAGCCTCTTGTGTCCAGCCTAGGCCCGCGTGCAGCGCCGACGGATGACCGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432887.5
ENST00000528107.5
ENST00000528898.1
ENST00000531632.6
ENST00000602733.5
CDS CAA 72 bp GGCCGCTTCTCAGCATCAGGAAGGAGGAGACTGCTCTaGGCCGGGAGGCGCCAGCCCAATATAGGGCAGCGC +
Preference number: 6 (lower is better)
Translates to: GRFSASGRRRLL*AGRRQPNIGQR
Trigger: GCGCTGCCCTATATTGGGCTGGCGCCTCCCGGCCAAGAGCAGTCTCCTCCTTCCTGATGCTGAGAAGCGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530419.5
ENST00000532687.5
CDS TCA 72 bp TCTTTCCCCTGCTTGCCGAAGGGGTTCAGTAAGCGGTaGCTCGCAGCTGGGCGGCGCCGTGTTTCCTCAGGG +
Preference number: 6 (lower is better)
Translates to: SFPCLPKGFSKR*LAAGRRRVSSG
Trigger: CCCTGAGGAAACACGGCGCCGCCCAGCTGCGAGTCACCGCTTACTGAACCCCTTCGGCAAGCAGGGGAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530419.5
ENST00000532687.5
CDS CAA 90 bp GGTCAGAGCGGCCGCTTCTCAGCATCAGGAAGGAGGAGACTGCTCTaGGCCGGGAGGCGCCAGCCCAATATAGGGCAGCGCCATGTCTTC +
Preference number: 6 (lower is better)
Translates to: GQSGRFSASGRRRLL*AGRRQPNIGQRHVF
Trigger: GAAGACATGGCGCTGCCCTATATTGGGCTGGCGCCTCCCGGCCAAGAGCAGTCTCCTCCTTCCTGATGCTGAGAAGCGGCCGCTCTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530419.5
ENST00000532687.5
CDS CAA 90 bp CCACTGTGTCTAAAAAGAGAGCCGAGGGGAGGAGGATCCTCGCACTaGCCAAGAAGACGGTCATCCGTCGGCGCTGCACGCGGGCCTAGG +
Preference number: 6 (lower is better)
Translates to: PLCLKREPRGGGSSH*PRRRSSVGAARGPR
Trigger: CCTAGGCCCGCGTGCAGCGCCGACGGATGACCGTCTTCTTGGCAAGTGCGAGGATCCTCCTCCCCTCGGCTCTCTTTTTAGACACAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528107.5
ENST00000528898.1
CDS GCA 72 bp CTTCGTACGGAAAGGCGGGAGGGTCTTTCCCCTGCTTaGCGAAGGGGTTCAGTAAGCGGTGACTCGCAGCTG +
Preference number: 6 (lower is better)
Translates to: LRTERREGLSPA*RRGSVSGDSQL
Trigger: CAGCTGCGAGTCACCGCTTACTGAACCCCTTCGGCAAGCAGGGGAAAGACCCTCCCGCCTTTCCGTACGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530419.5
ENST00000532687.5
CDS CAA 72 bp CTAAAAAGAGAGCCGAGGGGAGGAGGATCCTCGCACTaGCCAAGAAGACGGTCATCCGTCGGCGCTGCACGC +
Preference number: 6 (lower is better)
Translates to: LKREPRGGGSSH*PRRRSSVGAAR
Trigger: GCGTGCAGCGCCGACGGATGACCGTCTTCTTGGCAAGTGCGAGGATCCTCCTCCCCTCGGCTCTCTTTTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528107.5
ENST00000528898.1
CDS TCA 72 bp AACATGTCTGGAGGGGGAGAGGAGGGGGAGAGGAGGTaGAAAGGAGGGCATTTCACTCAGAGGGCAGAAGCC +
Preference number: 6 (lower is better)
Translates to: NMSGGGEEGERR*KGGHFTQRAEA
Trigger: GGCTTCTGCCCTCTGAGTGAAATGCCCTCCTTTTCACCTCCTCTCCCCCTCCTCTCCCCCTCCAGACATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS TCA 72 bp CTGTCTCTTCCCAGGACACTTCCCGGACCTCACCAGTaGTTGCACCTTTCTCAACTCCTGCAGGGCTGGCTA +
Preference number: 6 (lower is better)
Translates to: LSLPRTLPGPHQ*LHLSQLLQGWL
Trigger: TAGCCAGCCCTGCAGGAGTTGAGAAAGGTGCAATCACTGGTGAGGTCCGGGAAGTGTCCTGGGAAGAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS CCA 72 bp CTCCTCTGTAAAACACAGCTACCTACCTGCTCGGTTTaGGGGGAGATGAAACGAGGGATTGTGCACGGCAGG +
Preference number: 6 (lower is better)
Translates to: LLCKTQLPTCSV*GEMKRGIVHGR
Trigger: CCTGCCGTGCACAATCCCTCGTTTCATCTCCCCCCAAACCGAGCAGGTAGGTAGCTGTGTTTTACAGAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS CCA 72 bp TGGGCGTTGGTTTCAGACATACCTGGGCCCCAATTCTaGCTCTTTACTAGCTGTGTAACTTCAGTGTCCTCC +
Preference number: 6 (lower is better)
Translates to: WALVSDIPGPQF*LFTSCVTSVSS
Trigger: GGAGGACACTGAAGTTACACAGCTAGTAAAGAGCCAGAATTGGGGCCCAGGTATGTCTGAAACCAACGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS TCA 72 bp CATTTACTACAATTTCATGGGCTAGAGCCATGTTGGTaGCACCTCTCGCTGTCTCTAGAAGTTCTTCTACTG +
Preference number: 6 (lower is better)
Translates to: HLLQFHGLEPCW*HLSLSLEVLLL
Trigger: CAGTAGAAGAACTTCTAGAGACAGCGAGAGGTGTCACCAACATGGCTCTAGCCCATGAAATTGTAGTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000527661.5
ENST00000528107.5
ENST00000530419.5
ENST00000531632.6
ENST00000602733.5
CDS GCA 72 bp ATAGCATGGTCATATGCTGGGGGATCTTCACTTAGCTaGACACTCAAGCAATCCCAAAACGCTTTATGTACA +
Preference number: 6 (lower is better)
Translates to: IAWSYAGGSSLS*TLKQSQNALCT
Trigger: TGTACATAAAGCGTTTTGGGATTGCTTGAGTGTGCAGCTAAGTGAAGATCCCCCAGCATATGACCATGCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334274.9
ENST00000432887.5
ENST00000527661.5
ENST00000528107.5
ENST00000530419.5
ENST00000531632.6
CDS CAA 72 bp CTGTATATCCCCCAAATAGACACCCACAAGTATCTGTaGATAGAGATGAATCCCTACGTCATCTCTGTGATG +
Preference number: 6 (lower is better)
Translates to: LYIPQIDTHKYL*IEMNPYVISVM
Trigger: CATCACAGAGATGACGTAGGGATTCATCTCTATCAACAGATACTTGTGGGTGTCTATTTGGGGGATATACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS CAA 90 bp ATGCTCCATCTGTATATCCCCCAAATAGACACCCACAAGTATCTGTaGATAGAGATGAATCCCTACGTCATCTCTGTGATGTCACTGTAT +
Preference number: 6 (lower is better)
Translates to: MLHLYIPQIDTHKYL*IEMNPYVISVMSLY
Trigger: ATACAGTGACATCACAGAGATGACGTAGGGATTCATCTCTATCAACAGATACTTGTGGGTGTCTATTTGGGGGATATACAGATGGAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528107.5
CDS TCA 72 bp TCCGAAGAGTTTATCAACGAGGTTGTGTTAATCCGATaGTCAACATTGAACAGCTCTGGAGAGATCAGGATT +
Preference number: 6 (lower is better)
Translates to: SEEFINEVVLIR*STLNSSGEIRI
Trigger: AATCCTGATCTCTCCAGAGCTGTTCAATGTTGATCATCGGATTAACACAACCTCGTTGATAAACTCTTCGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528962.1
CDS CAA 72 bp ACGCTTTGTTACAAGGTTCTTGGAAACAAAGTTGTATaGTCATTGGTGCCTCTATCACATGGTTCTTTGGAA +
Preference number: 6 (lower is better)
Translates to: TLCYKVLGNKVV*SLVPLSHGSLE
Trigger: TTCCAAAGAACCATGTGATAGAGGCACCAATGACAATACAACTTTGTTTCCAAGAACCTTGTAACAAAGCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS GCA 72 bp GAAATTGCCAAAAGATATCCATCTTTTTCTCAGGATTaGATCGTAGTAGGGACAGAAGACCATCTTGTTATA +
Preference number: 6 (lower is better)
Translates to: EIAKRYPSFSQD*IVVGTEDHLVI
Trigger: TATAACAAGATGGTCTTCTGTCCCTACTACGATGCAATCCTGAGAAAAAGATGGATATCTTTTGGCAATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527661.5
CDS CAA 72 bp AGAAATTGCCAAAAGATATCCATCTTTTTCTCAGGATaGCATCGTAGTAGGGACAGAAGACCATCTTGTTAT +
Preference number: 6 (lower is better)
Translates to: RNCQKISIFFSG*HRSRDRRPSCY
Trigger: ATAACAAGATGGTCTTCTGTCCCTACTACGATGCAATCCTGAGAAAAAGATGGATATCTTTTGGCAATTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527661.5