RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBXT (Homo sapiens)

Ensembl gene IDs: ENSG00000164458

Ensembl transcript IDs: ENST00000296946.6, ENST00000366871.7, ENST00000366876.7, ENST00000461348.2

Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCACCTGGGACAGCACCGCTACTGCAGGTGTGAGCAAGGGATGCTaGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAA +
Preference number: 1 (lower is better)
Translates to: ATWDSTATAGVSKGC*GSGERCRVLLHCFE
Trigger: TTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCTTGCTCACACCTGCAGTAGCGGTGCTGTCCCAGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
3UTR CCA 90 bp CCTGAGACTGCCACTGGGTACCTAGTAGGTCAATCCAGTCACCACTaGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCC +
Preference number: 1 (lower is better)
Translates to: PETATGYLVGQSSHH*LPRQKVTASFGTWA
Trigger: GGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACTAGGTACCCAGTGGCAGTCTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
3UTR-3UTR TCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAATTTCCTTCTTAACCTaGGACTGCCACTGGGTACCT +
Preference number: 2 (lower is better)
Translates to: RDAGALGKGAVCSSTALKISFLT*DCHWVP
Trigger: AGGTACCCAGTGGCAGTCTCAGGTTAAGAAGGAAAT...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
3UTR CCA 72 bp GACAGCACCGCTACTGCAGGTGTGAGCAAGGGATGCTaGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCAC +
Preference number: 3 (lower is better)
Translates to: DSTATAGVSKGC*GSGERCRVLLH
Trigger: GTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCTTGCTCACACCTGCAGTAGCGGTGCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
3UTR CCA 72 bp GCCACTGGGTACCTAGTAGGTCAATCCAGTCACCACTaGCTGCCACGACAAAAAGTCACTGCATCTTTCGGG +
Preference number: 3 (lower is better)
Translates to: ATGYLVGQSSHH*LPRQKVTASFG
Trigger: CCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACTAGGTACCCAGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
3UTR TCA 72 bp TTTTATTCTGTCCTTAACAGCTCAACTCTAACTACTTaGAAGCAACAAGGAAGAAGATTAAGAGTGTGCTTT +
Preference number: 3 (lower is better)
Translates to: FYSVLNSSTLTT*KQQGRRLRVCF
Trigger: AAAGCACACTCTTAATCTTCTTCCTTGTTGCTTTCAAGTAGTTAGAGTTGAGCTGTTAAGGACAGAATAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAACCTGGGAGCCCGGGGTaGCGGCGCCGTTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKPGSPG*RRRCSQ
Trigger: CTGTGAGCAACGGCGCCGTCACCCCGGGCTCCCAGG...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGGCCGGGCTTTGGGATaGGCCGCGCTCGTCTCGCCG +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKGRALG*AALVSP
Trigger: CGGCGAGACGAGCGCGGCGCATCCCAAAGCCCGGCC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS-3UTR TCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCCCTGGGAGCCCGGGGTaGCGGCGCCGTTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCPGSPG*RRRCSQ
Trigger: CTGTGAGCAACGGCGCCGTCACCCCGGGCTCCCAGG...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAACCCGTTGGACACGGCTaGTGCCTGGGAGCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKPVGHG*CLGARG
Trigger: ACCCCGGGCTCCCAGGCAGCAGCCGTGTCCAACGGG...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCGACACGGCTGCTGCCTaGGAGCCCGGGGTGACGGCG +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCDTAAA*EPGVTA
Trigger: CGCCGTCACCCCGGGCTCCCAGGCAGCAGCCGTGTC...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAACCGAGACCGGATGGGTaGGGGGTGTGTAGTGCGCGG +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKPRPDG*GVCSAR
Trigger: CCGCGCACTACACACCCCTCACCCATCCGGTCTCGG...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGAGGCGGCCTTGGGCTaGGGCGTCGTACTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKEAALG*GVVLAV
Trigger: GACAGCCAGTACGACGCCGCAGCCCAAGGCCGCCTC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCCCTGGGAGCCCGGGGTaGCGGCGCCGTTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTPGSPG*RRRCSQ
Trigger: CTGTGAGCAACGGCGCCGTCACCCCGGGCTCCCAGG...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCGTTGGACACGGCTGCTaGCTGGGAGCCCGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCVGHGC*LGARGD
Trigger: GTCACCCCGGGCTCCCAGGCAGCAGCCGTGTCCAAC...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCGGGCCCCCAGCCCGTTaGACACGGCTGCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTGPPAR*TRLLPG
Trigger: CCCAGGCAGCAGCCGTGTCCAACGGGCTGGGGGCCC...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCGAGCCCCGGAAGAACTaGGCCCCCAGCCCGTTGGAC +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCEPRKN*APSPLD
Trigger: GTCCAACGGGCTGGGGGCCCAGTTCTTCCGGGGCTC...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGGAAGCAGTGGCTGGTaGTCATGCGCTGTGGACCCC +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKGSSGW*SCAVDP
Trigger: GGGGTCCACAGCGCATGATCACCAGCCACTGCTTCC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCGTGTCCATGAGGCTATaGGGCGGCCTTGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCVSMRL*GGLGLR
Trigger: CCGCAGCCCAAGGCCGCCTCATAGCCTCATGGACAC...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCCCTTGGACCGAGACCTaGGACGGCTCCCGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTPWTET*DGSRVP
Trigger: CGGGACCCGGGAGCCGTCGCAGGTCTCGGTCCAAGG...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366876.7
CDS-3UTR GCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAATTCTCGCTGCCCGCCTaGAGCTCATTCTCCACGGCG +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKFSLPA*SSFSTA
Trigger: CGCCGTGGAGAATGAGCTGCAGGCGGGCAGCGAGAA...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGGCTCACGGGGAGCATaGTGGGATGGGCAGGCATTC +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKGSRGA*WDGQAF
Trigger: GAATGCCTGCCCATCCCAGCATGCTCCCCGTGAGCC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCGCAGTTCGCGCTCTGTaGGGTCGCCCTTCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCAVRAL*GRPSRC
Trigger: GCAGCGAGAAGGGCGACCCCACAGAGCGCGAACTGC...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGGTGGGCTGGCATTGTaGCTCACGGGGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKGGLAL*LTGSML
Trigger: CAGCATGCTCCCCGTGAGCCACAATGCCAGCCCACC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGACACGGCTGCTGCCTaGGAGCCCGGGGTGACGGCG +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPDTAAA*EPGVTA
Trigger: CGCCGTCACCCCGGGCTCCCAGGCAGCAGCCGTGTC...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCTGTCCACGATGTCTGTaGCCGCGGCCGCCCCTTCGT +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCCPRCL*PRPPLR
Trigger: ACGAAGGGGCGGCCGCGGCCACAGACATCGTGGACA...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAACCCAGACTCGCTACCTaGGATCCACCTTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKPRLAT*DPPSLL
Trigger: GAGCAGGGAAGGTGGATCTCAGGTAGCGAGTCTGGG...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAACGACACAGGTGTCCATaGGGCTATGAGGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKRHRCP*GYEAAL
Trigger: CAAGGCCGCCTCATAGCCTCATGGACACCTGTGTCG...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCCCGCTACTGCAGGTGTaGGCAAGGGATGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCPLLQV*ARDAGA
Trigger: AGCCCCAGCATCCCTTGCTCACACCTGCAGTAGCGG...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCGATCGTGGATCAGCCTaGCCCGGCGTCGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTDRGSA*PGVGCP
Trigger: GGGACACCCGACGCCGGGGCAGGCTGATCCACGATC...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS-3UTR GCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGCCGGGCTTTGGGATaGGCCGCGCTCGTCTCGCCG +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFGRALG*AALVSP
Trigger: CGGCGAGACGAGCGCGGCGCATCCCAAAGCCCGGCC...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS-3UTR GCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAATGGTCCACTCGGTACTaGAGGCTCTTTCCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKWSTRY*RLFPAL
Trigger: GAGCGCGGGAAAGAGCCTGCAGTACCGAGTGGACCA...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCTTCTCGCTGCCCGCCTaGAGCTCATTCTCCACGGCG +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCFSLPA*SSFSTA
Trigger: CGCCGTGGAGAATGAGCTGCAGGCGGGCAGCGAGAA...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCGGTCGCCCTTCTCGCTaGCCGCCTGCAGCTCATTCT +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCGRPSR*PPAAHS
Trigger: AGAATGAGCTGCAGGCGGGCAGCGAGAAGGGCGACC...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCGGCTCACGGGGAGCATaGTGGGATGGGCAGGCATTC +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCGSRGA*WDGQAF
Trigger: GAATGCCTGCCCATCCCAGCATGCTCCCCGTGAGCC...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCGTTGGACACGGCTGCTaGCTGGGAGCCCGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTVGHGC*LGARGD
Trigger: GTCACCCCGGGCTCCCAGGCAGCAGCCGTGTCCAAC...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTCCCGTTGGACACGGCTaGTGCCTGGGAGCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPPVGHG*CLGARG
Trigger: ACCCCGGGCTCCCAGGCAGCAGCCGTGTCCAACGGG...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCGAGGCGGCCTTGGGCTaGGGCGTCGTACTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTEAALG*GVVLAV
Trigger: GACAGCCAGTACGACGCCGCAGCCCAAGGCCGCCTC...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCGGCTCTGGGGAAAGGTaGCGTGTGCTCCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCGSGER*RVLLHC
Trigger: GCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCC...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGGTGTGAGCAAGGGATaGTGGGGCTCTGGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKGVSKG*WGSGER
Trigger: CCTTTCCCCAGAGCCCCAGCATCCCTTGCTCACACC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGCGGCTCTCACCATCTaGAAAAGGAAGGTCCGCGCG +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKAALTI*KRKVRA
Trigger: CGCGCGGACCTTCCTTTTCCAGATGGTGAGAGCCGC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS-3UTR CCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGCAGGAAGGAGTACATaGCGTTGGGGTCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKAGRST*RWGPGQ
Trigger: CTGGCCTGGACCCCAACGCCATGTACTCCTTCCTGC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGAGTACCCAGGTTGCTaGCTGTCTCCGGGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKEYPGC*LSPGSS
Trigger: GGAGGAACCCGGAGACAGCCAGCAACCTGGGTACTC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGATGAGCATAGGGGCTaGGGTAGGGTGAGGACCGGT +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKDEHRG*GRVRTG
Trigger: ACCGGTCCTCACCCTACCCCAGCCCCTATGCTCATC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366876.7
CDS-3UTR CCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGGGAGCATGCTGGGATaGGCAGGCATTCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKGSMLG*AGIPRL
Trigger: CAGCCTTGGAATGCCTGCCCATCCCAGCATGCTCCC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCGGTGGGCTGGCATTGTaGCTCACGGGGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCGGLAL*LTGSML
Trigger: CAGCATGCTCCCCGTGAGCCACAATGCCAGCCCACC...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCCGCCCCTTCGTACAGTaGGGATCCCGAGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCRPFVQ*GSRGRG
Trigger: CCCTCTTCCTCGGGATCCCCACTGTACGAAGGGGCG...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCGGGATGCTGGGGCTCTaGGGAAAGGTGCCGTGTGCT +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCGMLGL*GKVPCA
Trigger: AGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCC...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGTGAGCAAGGGATGCTaGGGCTCTGGGGAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKVSKGC*GSGERC
Trigger: GCACCTTTCCCCAGAGCCCCAGCATCCCTTGCTCAC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGGCTGGGGTAGGGTaGGGACCGGTGGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFGAGVG*GPVAPQ
Trigger: CTGAGGAGCCACCGGTCCTCACCCTACCCCAGCCCC...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366876.7
CDS-3UTR TCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTCCGAGACCGGATGGGTaGGGGGTGTGTAGTGCGCGG +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPPRPDG*GVCSAR
Trigger: CCGCGCACTACACACCCCTCACCCATCCGGTCTCGG...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCCGACACAGGTGTCCATaGGGCTATGAGGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCRHRCP*GYEAAL
Trigger: CAAGGCCGCCTCATAGCCTCATGGACACCTGTGTCG...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCCCTTGGACCGAGACCTaGGACGGCTCCCGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFPWTET*DGSRVP
Trigger: CGGGACCCGGGAGCCGTCGCAGGTCTCGGTCCAAGG...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366876.7
CDS-3UTR GCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTTCCCGCGCTCTCGGTaGCAGGGGAGCTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTFPRSR*QGSSSS
Trigger: GGAGGATGAGCTCCCCTGGCACCGAGAGCGCGGGAA...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCTGGGAGTACCCAGGTTaGTGGCTGTCTCCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCWEYPG*WLSPGS
Trigger: GGAACCCGGAGACAGCCAGCAACCTGGGTACTCCCA...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCCCCGTTGGACACGGCTaGTGCCTGGGAGCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFPVGHG*CLGARG
Trigger: ACCCCGGGCTCCCAGGCAGCAGCCGTGTCCAACGGG...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAATCGGGACCTGGGCCTTaGTGCTTCACATGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKSGPGP*CFTWKV
Trigger: CACCTTCCATGTGAAGCAGCAAGGCCCAGGTCCCGA...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGGACAGCACCGCTACTaGAGGTGTGAGCAAGGGATG +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKGQHRY*RCEQGM
Trigger: CATCCCTTGCTCACACCTGCAGTAGCGGTGCTGTCC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCGCACACCCAGGATCGTaGATCAGCCTGCCCCGGCGT +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTAHPGS*ISLPRR
Trigger: ACGCCGGGGCAGGCTGATCCACGATCCTGGGTGTGC...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCGCAGTTCGCGCTCTGTaGGGTCGCCCTTCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTAVRAL*GRPSRC
Trigger: GCAGCGAGAAGGGCGACCCCACAGAGCGCGAACTGC...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCGCAGGAAGGAGTACATaGCGTTGGGGTCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCAGRST*RWGPGQ
Trigger: CTGGCCTGGACCCCAACGCCATGTACTCCTTCCTGC...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGATGTAGACGCAGCTaGGCGCCTGCGGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPGCRRS*APAAPA
Trigger: AGCCGGAGCCGCAGGCGCCCAGCTGCGTCTACATCC...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCGGGAGCATGCTGGGATaGGCAGGCATTCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCGSMLG*AGIPRL
Trigger: CAGCCTTGGAATGCCTGCCCATCCCAGCATGCTCCC...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAATCACAGACCACAGGCTaGGGTACTGACTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKSQTTG*GTDWSW
Trigger: CCAGCTCCAGTCAGTACCCCAGCCTGTGGTCTGTGA...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTGACACGGCTGCTGCCTaGGAGCCCGGGGTGACGGCG +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFDTAAA*EPGVTA
Trigger: CGCCGTCACCCCGGGCTCCCAGGCAGCAGCCGTGTC...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTGGGCCCCCAGCCCGTTaGACACGGCTGCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFGPPAR*TRLLPG
Trigger: CCCAGGCAGCAGCCGTGTCCAACGGGCTGGGGGCCC...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGTCCACGATGTCTGTaGCCGCGGCCGCCCCTTCGT +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTCPRCL*PRPPLR
Trigger: ACGAAGGGGCGGCCGCGGCCACAGACATCGTGGACA...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCGCTATGAGGCGGCCTTaGGCTGCGGCGTCGTACTGG +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTAMRRP*AAASYW
Trigger: CCAGTACGACGCCGCAGCCCAAGGCCGCCTCATAGC...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCCACCTTCCCTGCTCTTaGCCGCCGCCCTGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFHLPCS*PPPCPR
Trigger: GCGGGGACAGGGCGGCGGCCAAGAGCAGGGAAGGTG...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366871.7
CDS-3UTR TCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTGGGGCTGGGGTAGGGTaGGGACCGGTGGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFGAGVG*GPVAPQ
Trigger: CTGAGGAGCCACCGGTCCTCACCCTACCCCAGCCCC...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366876.7
CDS-3UTR GCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGATCGTGGATCAGCCTaGCCCGGCGTCGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFDRGSA*PGVGCP
Trigger: GGGACACCCGACGCCGGGGCAGGCTGATCCACGATC...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS-3UTR GCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTTTCCCGCGCTCTCGGTaGCAGGGGAGCTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPFPRSR*QGSSSS
Trigger: GGAGGATGAGCTCCCCTGGCACCGAGAGCGCGGGAA...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGAGGCGGCCTTGGGCTaGGGCGTCGTACTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFEAALG*GVVLAV
Trigger: GACAGCCAGTACGACGCCGCAGCCCAAGGCCGCCTC...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAACTCAACTCTCCAGTCTaGCAGTTTCCGGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKLNSPV*QFPVHL
Trigger: CAGGTGCACCGGAAACTGCCAGACTGGAGAGTTGAG...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCCACCTTCCCTGCTCTTaGCCGCCGCCCTTCCGAGAA +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTHLPCS*PPPFRE
Trigger: TTCTCGGAAGGGCGGCGGCCAAGAGCAGGGAAGGTG...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366876.7
CDS-3UTR CCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGATGTAGACGCAGCTaGGCGCCTGCGGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFGCRRS*APAAPA
Trigger: AGCCGGAGCCGCAGGCGCCCAGCTGCGTCTACATCC...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCGGAGCCTTCATCCAGTaGGCCCCGAAGTTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTGAFIQ*APKLGE
Trigger: CTCGCCCAACTTCGGGGCCCACTGGATGAAGGCTCC...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGAGTTCAGCATGATCTaGCCCCCTCCGTTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKEFSMI*PPPLSL
Trigger: CAAGCTCAACGGAGGGGGCCAGATCATGCTGAACTC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGTCTCAGGGAAGCAGTaGCTGGTGATCATGCGCTGT +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKVSGKQ*LVIMRC
Trigger: ACAGCGCATGATCACCAGCCACTGCTTCCCTGAGAC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCTCACAGACCACAGGCTaGGGTACTGACTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCSQTTG*GTDWSW
Trigger: CCAGCTCCAGTCAGTACCCCAGCCTGTGGTCTGTGA...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGAGCCCCGGAAGAACTaGGCCCCCAGCCCGTTGGAC +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFEPRKN*APSPLD
Trigger: GTCCAACGGGCTGGGGGCCCAGTTCTTCCGGGGCTC...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCCGCCCCTTCGTACAGTaGGGATCCCGAGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTRPFVQ*GSRGRG
Trigger: CCCTCTTCCTCGGGATCCCCACTGTACGAAGGGGCG...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAACCTTGCTGCTTCACATaGAAGGTGGCGACACAGGTG +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKPCCFT*KVATQV
Trigger: CACCTGTGTCGCCACCTTCCATGTGAAGCAGCAAGG...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGCATCTTTCGGGACCTaGGCCTTGCTGCTTCACATG +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKASFGT*ALLLHM
Trigger: CATGTGAAGCAGCAAGGCCCAGGTCCCGAAAGATGC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCGGGATGCTGGGGCTCTaGGGAAAGGTGCCGTGTGCT +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTGMLGL*GKVPCA
Trigger: AGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCC...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGAAGCAGTGGCTGGTaGTCATGCGCTGTGGACCCC +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPGSSGW*SCAVDP
Trigger: GGGGTCCACAGCGCATGATCACCAGCCACTGCTTCC...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCCGAGACCGGATGGGTaGGGGGTGTGTAGTGCGCGG +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFPRPDG*GVCSAR
Trigger: CCGCGCACTACACACCCCTCACCCATCCGGTCTCGG...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCCGACACAGGTGTCCATaGGGCTATGAGGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTRHRCP*GYEAAL
Trigger: CAAGGCCGCCTCATAGCCTCATGGACACCTGTGTCG...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTTTCTCGCTGCCCGCCTaGAGCTCATTCTCCACGGCG +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPFSLPA*SSFSTA
Trigger: CGCCGTGGAGAATGAGCTGCAGGCGGGCAGCGAGAA...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGAGTACCCAGGTTaGTGGCTGTCTCCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTWEYPG*WLSPGS
Trigger: GGAACCCGGAGACAGCCAGCAACCTGGGTACTCCCA...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGCTCACGGGGAGCATaGTGGGATGGGCAGGCATTC +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPGSRGA*WDGQAF
Trigger: GAATGCCTGCCCATCCCAGCATGCTCCCCGTGAGCC...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGGGAAAGGTGCCGTGTaGTCCTCCACTGCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKGKGAV*SSTALK
Trigger: TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGCTCTGGGGAAAGGTaGCGTGTGCTCCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPGSGER*RVLLHC
Trigger: GCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCC...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTCATTTGGCCGGGCTTTaGGATGCGCCGCGCTCGTCT +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPHLAGL*DAPRSS
Trigger: AGACGAGCGCGGCGCATCCCAAAGCCCGGCCAAATG...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS-3UTR CCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTAGGGACGAGCGCATTTaGCCGGGCTTTGGGATGCGC +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPRDERI*PGFGMR
Trigger: GCGCATCCCAAAGCCCGGCCAAATGCGCTCGTCCCT...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCGCAGGAAGGAGTACATaGCGTTGGGGTCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTAGRST*RWGPGQ
Trigger: CTGGCCTGGACCCCAACGCCATGTACTCCTTCCTGC...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCACGTACTTCCAGCGGTaGTTGTCCGCCGCCACGAAG +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTTYFQR*LSAATK
Trigger: CTTCGTGGCGGCGGACAACCACCGCTGGAAGTACGT...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTAGTGGGCCCCGAAGTTaGGCGAGTCGGGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPSGPRS*ASRGGC
Trigger: ACATCCACCCCGACTCGCCCAACTTCGGGGCCCACT...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCGTCACCGCTATGAACTaGGTCTCAGGGAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCVTAMN*VSGKQW
Trigger: CCACTGCTTCCCTGAGACCCAGTTCATAGCGGTGAC...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCGAGTACCCAGGTTGCTaGCTGTCTCCGGGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTEYPGC*LSPGSS
Trigger: GGAGGAACCCGGAGACAGCCAGCAACCTGGGTACTC...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGTGGGCTGGCATTGTaGCTCACGGGGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPGGLAL*LTGSML
Trigger: CAGCATGCTCCCCGTGAGCCACAATGCCAGCCCACC...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTGAGCCCCGGAAGAACTaGGCCCCCAGCCCGTTGGAC +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFEPRKN*APSPLD
Trigger: GTCCAACGGGCTGGGGGCCCAGTTCTTCCGGGGCTC...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCGCTGCGGCGTCGTACTaGCTGTCCACGATGTCTGTG +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTAAASY*LSTMSV
Trigger: CACAGACATCGTGGACAGCCAGTACGACGCCGCAGC...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGCTATGAGGCGGCCTTaGGCTGCGGCGTCGTACTGG +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFAMRRP*AAASYW
Trigger: CCAGTACGACGCCGCAGCCCAAGGCCGCCTCATAGC...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCGTGAGCAAGGGATGCTaGGGCTCTGGGGAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTVSKGC*GSGERC
Trigger: GCACCTTTCCCCAGAGCCCCAGCATCCCTTGCTCAC...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCACGGGGGCAGAGGGGTaGGGAGAAGTTATTCCACTT +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCTGAEG*GEVIPL
Trigger: AAGTGGAATAACTTCTCCCCACCCCTCTGCCCCCGT...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000366876.7
CDS-3UTR TCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTCCCAGACTCGCTACCTaGGATCCACCTTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPPRLAT*DPPSLL
Trigger: GAGCAGGGAAGGTGGATCTCAGGTAGCGAGTCTGGG...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTGTGTCCATGAGGCTATaGGGCGGCCTTGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFVSMRL*GGLGLR
Trigger: CCGCAGCCCAAGGCCGCCTCATAGCCTCATGGACAC...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCCAAAACAACCCCTTCTaGGAAGTGTCCTCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCQNNPF*EVSSSL
Trigger: GAGCGAGGAGGACACTTCTCAGAAGGGGTTGTTTTG...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366871.7
CDS-3UTR GCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTTCTGGCAGTTTCCGGTaGACCTGTCCCCACACGTCC +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPSGSFR*TCPHTS
Trigger: GGACGTGTGGGGACAGGTGCACCGGAAACTGCCAGA...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS-3UTR GCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGAGATCCACCTTCCCTaGTCTTGGCCGCCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFEIHLP*SWPPPF
Trigger: GAAGGGCGGCGGCCAAGAGCAGGGAAGGTGGATCTC...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366876.7
CDS-3UTR GCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTTTCCCGCGCTCTCGGTaGCAGGGGAGCTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFFPRSR*QGSSSS
Trigger: GGAGGATGAGCTCCCCTGGCACCGAGAGCGCGGGAA...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTTGGTCCACTCGGTACTaGAGGCTCTTTCCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPWSTRY*RLFPAL
Trigger: GAGCGCGGGAAAGAGCCTGCAGTACCGAGTGGACCA...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTTGGGAGTACCCAGGTTaGTGGCTGTCTCCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPWEYPG*WLSPGS
Trigger: GGAACCCGGAGACAGCCAGCAACCTGGGTACTCCCA...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCGGGAAAGGTGCCGTGTaGTCCTCCACTGCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCGKGAV*SSTALK
Trigger: TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCC...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGCGGCTCTCACCATCTaGAAAAGGAAGGTCCGCGCG +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPAALTI*KRKVRA
Trigger: CGCGCGGACCTTCCTTTTCCAGATGGTGAGAGCCGC...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS-3UTR CCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTGCACACCCAGGATCGTaGATCAGCCTGCCCCGGCGT +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFAHPGS*ISLPRR
Trigger: ACGCCGGGGCAGGCTGATCCACGATCCTGGGTGTGC...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS-3UTR CCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCCATTTGGCCGGGCTTTaGGATGCGCCGCGCTCGTCT +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFHLAGL*DAPRSS
Trigger: AGACGAGCGCGGCGCATCCCAAAGCCCGGCCAAATG...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS-3UTR CCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCCACCTTCCCTGCTCTTaGCCGCCGCCCTTCCGAGAA +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFHLPCS*PPPFRE
Trigger: TTCTCGGAAGGGCGGCGGCCAAGAGCAGGGAAGGTG...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366876.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCAGGAGTACATGGCGTTaGGGTCCAGGCCAGACACGT +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTRSTWR*GPGQTR
Trigger: ACGTGTCTGGCCTGGACCCCAACGCCATGTACTCCT...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTACGTACTTCCAGCGGTaGTTGTCCGCCGCCACGAAG +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPTYFQR*LSAATK
Trigger: CTTCGTGGCGGCGGACAACCACCGCTGGAAGTACGT...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCAGTGGGCCCCGAAGTTaGGCGAGTCGGGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFSGPRS*ASRGGC
Trigger: ACATCCACCCCGACTCGCCCAACTTCGGGGCCCACT...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCGTGGACACAGGGTGCTaGTTCCAGGAAGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTVDTGC*FQEEAT
Trigger: GGTGGCTTCTTCCTGGAACCAGCACCCTGTGTCCAC...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366876.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTCACAGACCACAGGCTaGGGTACTGACTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTSQTTG*GTDWSW
Trigger: CCAGCTCCAGTCAGTACCCCAGCCTGTGGTCTGTGA...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTTGTCCACGATGTCTGTaGCCGCGGCCGCCCCTTCGT +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFCPRCL*PRPPLR
Trigger: ACGAAGGGGCGGCCGCGGCCACAGACATCGTGGACA...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGCTGCGGCGTCGTACTaGCTGTCCACGATGTCTGTG +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPAAASY*LSTMSV
Trigger: CACAGACATCGTGGACAGCCAGTACGACGCCGCAGC...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCCCCAGACTCGCTACCTaGGATCCACCTTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFPRLAT*DPPSLL
Trigger: GAGCAGGGAAGGTGGATCTCAGGTAGCGAGTCTGGG...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCAAGCAGTCACCGCTATaGACTGGGTCTCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTKQSPL*TGSQGS
Trigger: GCTTCCCTGAGACCCAGTTCATAGCGGTGACTGCTT...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCCGCTACTGCAGGTGTaGGCAAGGGATGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFPLLQV*ARDAGA
Trigger: AGCCCCAGCATCCCTTGCTCACACCTGCAGTAGCGG...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCTCTGGCAGTTTCCGGTaGACCTGTCCCCACACGTCC +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFSGSFR*TCPHTS
Trigger: GGACGTGTGGGGACAGGTGCACCGGAAACTGCCAGA...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS-3UTR GCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTTTCTCGCGCCTCCGATaGCTCAACTCTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPFSRLR*LNSPVW
Trigger: CCAGACTGGAGAGTTGAGGCATCGGAGGCGCGAGAA...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS-3UTR GCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTGGTCGCCCTTCTCGCTaGCCGCCTGCAGCTCATTCT +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFGRPSR*PPAAHS
Trigger: AGAATGAGCTGCAGGCGGGCAGCGAGAAGGGCGACC...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTTCGGGACCTGGGCCTTaGTGCTTCACATGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPSGPGP*CFTWKV
Trigger: CACCTTCCATGTGAAGCAGCAAGGCCCAGGTCCCGA...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGTGTGAGCAAGGGATaGTGGGGCTCTGGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFGVSKG*WGSGER
Trigger: CCTTTCCCCAGAGCCCCAGCATCCCTTGCTCACACC...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTGAGATCCACCTTCCCTaGTCTTGGCCGCCGCCCTGT +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFEIHLP*SWPPPC
Trigger: ACAGGGCGGCGGCCAAGAGCAGGGAAGGTGGATCTC...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366871.7
CDS-3UTR CCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTAGGGACGAGCGCATTTaGCCGGGCTTTGGGATGCGC +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFRDERI*PGFGMR
Trigger: GCGCATCCCAAAGCCCGGCCAAATGCGCTCGTCCCT...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS-3UTR CCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTGGAGCCTTCATCCAGTaGGCCCCGAAGTTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFGAFIQ*APKLGE
Trigger: CTCGCCCAACTTCGGGGCCCACTGGATGAAGGCTCC...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCGTCTCAGGGAAGCAGTaGCTGGTGATCATGCGCTGT +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTVSGKQ*LVIMRC
Trigger: ACAGCGCATGATCACCAGCCACTGCTTCCCTGAGAC...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCGTCACCGCTATGAACTaGGTCTCAGGGAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTVTAMN*VSGKQW
Trigger: CCACTGCTTCCCTGAGACCCAGTTCATAGCGGTGAC...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGTGGACACAGGGTGCTaGTTCCAGGAAGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPVDTGC*FQEEAT
Trigger: GGTGGCTTCTTCCTGGAACCAGCACCCTGTGTCCAC...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366876.7
CDS-3UTR CCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGTGGCTCCTCAGGGTTaGGTACCTGTCACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPVAPQG*VPVTAV
Trigger: CACAGCTGTGACAGGTACCCAACCCTGAGGAGCCAC...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366876.7
CDS-3UTR CCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGATGAGCATAGGGGCTaGGGTAGGGTGAGGACCGGT +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFDEHRG*GRVRTG
Trigger: ACCGGTCCTCACCCTACCCCAGCCCCTATGCTCATC...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366876.7
CDS-3UTR CCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTTCACGGGGAGCATGCTaGGATGGGCAGGCATTCCAA +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPSRGAC*DGQAFQ
Trigger: TTGGAATGCCTGCCCATCCCAGCATGCTCCCCGTGA...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGCCCCTTCGTACAGTaGGGATCCCGAGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFRPFVQ*GSRGRG
Trigger: CCCTCTTCCTCGGGATCCCCACTGTACGAAGGGGCG...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGCTGCGGCGTCGTACTaGCTGTCCACGATGTCTGTG +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFAAASY*LSTMSV
Trigger: CACAGACATCGTGGACAGCCAGTACGACGCCGCAGC...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCGCATCTTTCGGGACCTaGGCCTTGCTGCTTCACATG +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTASFGT*ALLLHM
Trigger: CATGTGAAGCAGCAAGGCCCAGGTCCCGAAAGATGC...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTGGGATGCTGGGGCTCTaGGGAAAGGTGCCGTGTGCT +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFGMLGL*GKVPCA
Trigger: AGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCC...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTTGGTCCACTCGGTACTaGAGGCTCTTTCCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFWSTRY*RLFPAL
Trigger: GAGCGCGGGAAAGAGCCTGCAGTACCGAGTGGACCA...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCCCGGAAACATCCTCCTaGCGTTCTTGGTCACGATCA +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTPETSS*RSWSRS
Trigger: TGATCGTGACCAAGAACGGCAGGAGGATGTTTCCGG...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCTCGGGACCTGGGCCTTaGTGCTTCACATGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFSGPGP*CFTWKV
Trigger: CACCTTCCATGTGAAGCAGCAAGGCCCAGGTCCCGA...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCAGGAGTACATGGCGTTaGGGTCCAGGCCAGACACGT +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFRSTWR*GPGQTR
Trigger: ACGTGTCTGGCCTGGACCCCAACGCCATGTACTCCT...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTACGTACTTCCAGCGGTaGTTGTCCGCCGCCACGAAG +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFTYFQR*LSAATK
Trigger: CTTCGTGGCGGCGGACAACCACCGCTGGAAGTACGT...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGTCACCGCTATGAACTaGGTCTCAGGGAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPVTAMN*VSGKQW
Trigger: CCACTGCTTCCCTGAGACCCAGTTCATAGCGGTGAC...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTGAGTACCCAGGTTGCTaGCTGTCTCCGGGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFEYPGC*LSPGSS
Trigger: GGAGGAACCCGGAGACAGCCAGCAACCTGGGTACTC...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCAGAAGCCACCCCCATTaGGAGTACCCAGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFRSHPH*EYPGCW
Trigger: CCAGCAACCTGGGTACTCCCAATGGGGGTGGCTTCT...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296946.6
CDS-3UTR CCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCTCACGGGGAGCATGCTaGGATGGGCAGGCATTCCAA +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFSRGAC*DGQAFQ
Trigger: TTGGAATGCCTGCCCATCCCAGCATGCTCCCCGTGA...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGCATCTTTCGGGACCTaGGCCTTGCTGCTTCACATG +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPASFGT*ALLLHM
Trigger: CATGTGAAGCAGCAAGGCCCAGGTCCCGAAAGATGC...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTGTGAGCAAGGGATGCTaGGGCTCTGGGGAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFVSKGC*GSGERC
Trigger: GCACCTTTCCCCAGAGCCCCAGCATCCCTTGCTCAC...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTCCGGAAACATCCTCCTaGCGTTCTTGGTCACGATCA +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPPETSS*RSWSRS
Trigger: TGATCGTGACCAAGAACGGCAGGAGGATGTTTCCGG...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCCGAGGCTCATACTTATaGAAGGAGTTCAGCATGATC +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCRGSYL*KEFSMI
Trigger: GATCATGCTGAACTCCTTGCATAAGTATGAGCCTCG...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCCGTGTGCTCCTCCACTaGTTTGAAAAGGAAGTTACT +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCRVLLH*FEKEVT
Trigger: AGTAACTTCCTTTTCAAAGCAGTGGAGGAGCACACG...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTGGACAGCACCGCTACTaGAGGTGTGAGCAAGGGATG +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFGQHRY*RCEQGM
Trigger: CATCCCTTGCTCACACCTGCAGTAGCGGTGCTGTCC...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTAGGAGTACATGGCGTTaGGGTCCAGGCCAGACACGT +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFRSTWR*GPGQTR
Trigger: ACGTGTCTGGCCTGGACCCCAACGCCATGTACTCCT...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTATGAGGATTTGCAGGTaGACACAGGGTGCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPMRICR*TQGAGS
Trigger: GGAACCAGCACCCTGTGTCCACCTGCAAATCCTCAT...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366876.7
CDS-3UTR CCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGTTGTCAGAATAGGTTaGAGAATTGTTCCGATGAGC +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKVVRIG*RIVPMS
Trigger: GCTCATCGGAACAATTCTCCAACCTATTCTGACAAC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366876.7
CDS-3UTR CCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTTCACGGGGAGCATGCTaGGATGGGCAGGCATTCCAA +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFSRGAC*DGQAFQ
Trigger: TTGGAATGCCTGCCCATCCCAGCATGCTCCCCGTGA...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCCCTTGCTGCTTCACATaGAAGGTGGCGACACAGGTG +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFPCCFT*KVATQV
Trigger: CACCTGTGTCGCCACCTTCCATGTGAAGCAGCAAGG...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCCAATCCAGTCACCACTaGCTGCCACGACAAAAAGTC +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTQSSHH*LPRQKV
Trigger: GACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTAAGCAGTCACCGCTATaGACTGGGTCTCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFKQSPL*TGSQGS
Trigger: GCTTCCCTGAGACCCAGTTCATAGCGGTGACTGCTT...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCCCGGAAACATCCTCCTaGCGTTCTTGGTCACGATCA +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFPETSS*RSWSRS
Trigger: TGATCGTGACCAAGAACGGCAGGAGGATGTTTCCGG...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGAAAGGTGCCGTGTaGTCCTCCACTGCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFGKGAV*SSTALK
Trigger: TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCC...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTGAGTTCAGCATGATCTaGCCCCCTCCGTTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFEFSMI*PPPLSL
Trigger: CAAGCTCAACGGAGGGGGCCAGATCATGCTGAACTC...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCGTTGTCAGAATAGGTTaGAGAATTGTTCCGATGAGC +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCVVRIG*RIVPMS
Trigger: GCTCATCGGAACAATTCTCCAACCTATTCTGACAAC...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366876.7
CDS-3UTR CCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCGCGCAGAGAGGGAAATaGACGGAAATAAGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTAQRGK*TEISKS
Trigger: GCTTTTGCTTATTTCCGTCCATTTCCCTCTCTGCGC...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366871.7
3UTR CAA 72 bp GCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTaGAAAAGGAAGTTACTGAGGCTGCATTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: ALGKGAVCSSTA*KRKLLRLHFLL
Trigger: AAGAAGGAAATGCAGCCTCAGTAACTTCCTTTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCACGACAAAAAGTCACTaGATCTTTCGGGACCTGGGC +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFTTKSH*IFRDLG
Trigger: GCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGT...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAATTACAAATTCTGGTGTaGCAAAGTTGCCAATACACT +
Preference number: 4 (lower is better)
Translates to: RDAGALGKGAVCSSTALKLQILV*QSCQYT
Trigger: AGTGTATTGGCAACTTTGGCACACCAGAATTTGTAA...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCCAATCCAGTCACCACTaGCTGCCACGACAAAAAGTC +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFQSSHH*LPRQKV
Trigger: GACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCGGAGTTTACAAATTCTaGTGTGCCAAAGTTGCCAAT +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCGVYKF*CAKVAN
Trigger: ATTGGCAACTTTGGCACACCAGAATTTGTAAACTCC...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCATTTCCTTCTTAACCTaGGACTGCCACTGGGTACCT +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFISFLT*DCHWVP
Trigger: AGGTACCCAGTGGCAGTCTCAGGTTAAGAAGGAAAT...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTACGACAAAAAGTCACTaGATCTTTCGGGACCTGGGC +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFTTKSH*IFRDLG
Trigger: GCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGT...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTCGTGTGCTCCTCCACTaGTTTGAAAAGGAAGTTACT +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPRVLLH*FEKEVT
Trigger: AGTAACTTCCTTTTCAAAGCAGTGGAGGAGCACACG...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCTTACAAATTCTGGTGTaGCAAAGTTGCCAATACACT +
Preference number: 4 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCLQILV*QSCQYT
Trigger: AGTGTATTGGCAACTTTGGCACACCAGAATTTGTAA...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTATTTCCTTCTTAACCTaGGACTGCCACTGGGTACCT +
Preference number: 4 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFISFLT*DCHWVP
Trigger: AGGTACCCAGTGGCAGTCTCAGGTTAAGAAGGAAAT...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCAGAAGTTATTCCACTTaGACTCCCCAAGGCTCTACT +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFRSYST*TPQGST
Trigger: AGTAGAGCCTTGGGGAGTTCAAGTGGAATAACTTCT...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366876.7
CDS-3UTR GCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCCGAGGCTCATACTTATaGAAGGAGTTCAGCATGATC +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFRGSYL*KEFSMI
Trigger: GATCATGCTGAACTCCTTGCATAAGTATGAGCCTCG...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCCGTGTGCTCCTCCACTaGTTTGAAAAGGAAGTTACT +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFRVLLH*FEKEVT
Trigger: AGTAACTTCCTTTTCAAAGCAGTGGAGGAGCACACG...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTCAACTCTAACTACTTaGAAGCAACAAGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTSTLTT*KQQGRR
Trigger: TCTTCTTCCTTGTTGCTTTCAAGTAGTTAGAGTTGA...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CCA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGAGTTTACAAATTCTaGTGTGCCAAAGTTGCCAAT +
Preference number: 4 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPGVYKF*CAKVAN
Trigger: ATTGGCAACTTTGGCACACCAGAATTTGTAAACTCC...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCTCAACTCTAACTACTTaGAAGCAACAAGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFSTLTT*KQQGRR
Trigger: TCTTCTTCCTTGTTGCTTTCAAGTAGTTAGAGTTGA...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR TCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCTGCTGTCCTCAACTATaGTTTTATTCTGTCCTTAAC +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFCCPQL*FYSVLN
Trigger: GTTAAGGACAGAATAAAATCATAGTTGAGGACAGCA...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR GCA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCTTACAAATTCTGGTGTaGCAAAGTTGCCAATACACT +
Preference number: 4 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFLQILV*QSCQYT
Trigger: AGTGTATTGGCAACTTTGGCACACCAGAATTTGTAA...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS CCA 90 bp CTGGCTGTCCACGATGTCTGTGGCCGCGGCCGCCCCTTCGTACAGTaGGGATCCCGAGGAAGAGGGCGCCGAGACCGGATGGGTGAGGGG +
Preference number: 5 (lower is better)
Translates to: LAVHDVCGRGRPFVQ*GSRGRGRRDRMGEG
Trigger: CCCCTCACCCATCCGGTCTCGGCGCCCTCTTCCTCGGGATCCCCACTGTACGAAGGGGCGGCCGCGGCCACAGACATCGTGGACAGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS CCA 90 bp CGCGCCTCCCTCCCCTCCCAGGGACGAGCGCATTTGGCCGGGCTTTaGGATGCGCCGCGCTCGTCTCGCCGCAGTAGTAGTGCTGTTCTC +
Preference number: 5 (lower is better)
Translates to: RASLPSQGRAHLAGL*DAPRSSRRSSSAVL
Trigger: GAGAACAGCACTACTACTGCGGCGAGACGAGCGCGGCGCATCCCAAAGCCCGGCCAAATGCGCTCGTCCCTGGGAGGGGAGGGAGGCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS CCA 90 bp GGTGTCCATGAGGCTATGAGGCGGCCTTGGGCTGCGGCGTCGTACTaGCTGTCCACGATGTCTGTGGCCGCGGCCGCCCCTTCGTACAGT +
Preference number: 5 (lower is better)
Translates to: GVHEAMRRPWAAASY*LSTMSVAAAAPSYS
Trigger: ACTGTACGAAGGGGCGGCCGCGGCCACAGACATCGTGGACAGCCAGTACGACGCCGCAGCCCAAGGCCGCCTCATAGCCTCATGGACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCTGGGCCCCCAGCCCGTaGGACACGGCTGCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCWAPSP*DTAAAW
Trigger: CCAGGCAGCAGCCGTGTCCAACGGGCTGGGGGCCCA...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCCCACCTTCCCTGCTCTaGGCCGCCGCCCTGTCCCCG +
Preference number: 5 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCPPSLL*AAALSP
Trigger: CGGGGACAGGGCGGCGGCCAAGAGCAGGGAAGGTGG...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366871.7
CDS GCA 90 bp CGCGCTCGTCTCGCCGCAGTAGTAGTGCTGTTCTCGCGCCTCCGATaGCTCAACTCTCCAGTCTGGCAGTTTCCGGTGCACCTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: RARLAAVVVLFSRLR*LNSPVWQFPVHLSP
Trigger: TGGGGACAGGTGCACCGGAAACTGCCAGACTGGAGAGTTGAGGCATCGGAGGCGCGAGAACAGCACTACTACTGCGGCGAGACGAGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS CCA 90 bp GTAGTAGTGCTGTTCTCGCGCCTCCGATGCCTCAACTCTCCAGTCTaGCAGTTTCCGGTGCACCTGTCCCCACACGTCCCTCGCCCACGG +
Preference number: 5 (lower is better)
Translates to: VVVLFSRLRCLNSPV*QFPVHLSPHVPRPR
Trigger: CCGTGGGCGAGGGACGTGTGGGGACAGGTGCACCGGAAACTGCCAGACTGGAGAGTTGAGGCATCGGAGGCGCGAGAACAGCACTACTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS-3UTR CAA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGGGGTGACGGCGCCGTaGCTCACAGACCACAGGCTG +
Preference number: 5 (lower is better)
Translates to: RDAGALGKGAVCSSTALKGVTAP*LTDHRL
Trigger: CAGCCTGTGGTCTGTGAGCAACGGCGCCGTCACCCC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGGCTATGAGGCGGCCTaGGGCTGCGGCGTCGTACTG +
Preference number: 5 (lower is better)
Translates to: RDAGALGKGAVCSSTALKGYEAA*GCGVVL
Trigger: CAGTACGACGCCGCAGCCCAAGGCCGCCTCATAGCC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCGGGGTGACGGCGCCGTaGCTCACAGACCACAGGCTG +
Preference number: 5 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCGVTAP*LTDHRL
Trigger: CAGCCTGTGGTCTGTGAGCAACGGCGCCGTCACCCC...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCCCCAGCCCGTaGGACACGGCTGCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTWAPSP*DTAAAW
Trigger: CCAGGCAGCAGCCGTGTCCAACGGGCTGGGGGCCCA...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAATACTTCCAGCGGTGGTaGTCCGCCGCCACGAAGTCC +
Preference number: 5 (lower is better)
Translates to: RDAGALGKGAVCSSTALKYFQRW*SAATKS
Trigger: GGACTTCGTGGCGGCGGACAACCACCGCTGGAAGTA...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGTAGGTGGGCTGGCATaGTGGCTCACGGGGAGCATG +
Preference number: 5 (lower is better)
Translates to: RDAGALGKGAVCSSTALKVGGLA*WLTGSM
Trigger: CATGCTCCCCGTGAGCCACAATGCCAGCCCACCTAC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAATTGGGAGTACCCAGGTaGCTGGCTGTCTCCGGGTTC +
Preference number: 5 (lower is better)
Translates to: RDAGALGKGAVCSSTALKLGVPR*LAVSGF
Trigger: GAACCCGGAGACAGCCAGCAACCTGGGTACTCCCAA...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCGTAGGTGGGCTGGCATaGTGGCTCACGGGGAGCATG +
Preference number: 5 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCVGGLA*WLTGSM
Trigger: CATGCTCCCCGTGAGCCACAATGCCAGCCCACCTAC...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCTGGGCCCCCAGCCCGTaGGACACGGCTGCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFWAPSP*DTAAAW
Trigger: CCAGGCAGCAGCCGTGTCCAACGGGCTGGGGGCCCA...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCGGCTATGAGGCGGCCTaGGGCTGCGGCGTCGTACTG +
Preference number: 5 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTGYEAA*GCGVVL
Trigger: CAGTACGACGCCGCAGCCCAAGGCCGCCTCATAGCC...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGCATTTGGCCGGGCTTaGGGATGCGCCGCGCTCGTC +
Preference number: 5 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPAFGRA*GCAALV
Trigger: GACGAGCGCGGCGCATCCCAAAGCCCGGCCAAATGC...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS-3UTR CAA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCCAGGGACGAGCGCATTaGGCCGGGCTTTGGGATGCG +
Preference number: 5 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTQGRAH*AGLWDA
Trigger: CGCATCCCAAAGCCCGGCCAAATGCGCTCGTCCCTG...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS-3UTR CAA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAAAGAAGCCACCCCCATaGGGAGTACCCAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: RDAGALGKGAVCSSTALKKKPPP*GVPRLL
Trigger: CAGCAACCTGGGTACTCCCAATGGGGGTGGCTTCTT...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000296946.6
CDS-3UTR CAA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTACTTCCAGCGGTGGTaGTCCGCCGCCACGAAGTCC +
Preference number: 5 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTYFQRW*SAATKS
Trigger: GGACTTCGTGGCGGCGGACAACCACCGCTGGAAGTA...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGCTATGAGGCGGCCTaGGGCTGCGGCGTCGTACTG +
Preference number: 5 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFGYEAA*GCGVVL
Trigger: CAGTACGACGCCGCAGCCCAAGGCCGCCTCATAGCC...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCTTCGGGACCTGGGCCTaGCTGCTTCACATGGAAGGT +
Preference number: 5 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCFGTWA*LLHMEG
Trigger: ACCTTCCATGTGAAGCAGCAAGGCCCAGGTCCCGAA...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCCAGGGACGAGCGCATTaGGCCGGGCTTTGGGATGCG +
Preference number: 5 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFQGRAH*AGLWDA
Trigger: CGCATCCCAAAGCCCGGCCAAATGCGCTCGTCCCTG...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS-3UTR CAA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTAAGGAGTACATGGCGTaGGGGTCCAGGCCAGACACG +
Preference number: 5 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPKEYMA*GSRPDT
Trigger: CGTGTCTGGCCTGGACCCCAACGCCATGTACTCCTT...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp AGGGATGCTGGGGCTCTGGGGAAAGGTGCCGTGTGCTCCTCCACTGCTTTGAAAGCATCATCTCCACAGTaGGGTTCATCTGTAAGCCAC +
Preference number: 5 (lower is better)
Translates to: RDAGALGKGAVCSSTALKASSPQ*GSSVSH
Trigger: GTGGCTTACAGATGAACCCAACTGTGGAGATGATGC...TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS GCA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTaGATCTTTCGGGACCTGGGCCTTGCTGCTTCACATGGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: SRSIQSPLAATTKSH*IFRDLGLAASHGRW
Trigger: CCACCTTCCATGTGAAGCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCAAGGAGTACATGGCGTaGGGGTCCAGGCCAGACACG +
Preference number: 5 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFKEYMA*GSRPDT
Trigger: CGTGTCTGGCCTGGACCCCAACGCCATGTACTCCTT...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGTGGCTCCTCAGGGTaGGGTACCTGTCACAGCTGT +
Preference number: 5 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFGGSSG*GTCHSC
Trigger: ACAGCTGTGACAGGTACCCAACCCTGAGGAGCCACC...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366876.7
CDS-3UTR CAA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTTTCGGGACCTGGGCCTaGCTGCTTCACATGGAAGGT +
Preference number: 5 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPFGTWA*LLHMEG
Trigger: ACCTTCCATGTGAAGCAGCAAGGCCCAGGTCCCGAA...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCGCATCATCTCCACAGTaGGGTTCATCTGTAAGCCAC +
Preference number: 5 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCASSPQ*GSSVSH
Trigger: GTGGCTTACAGATGAACCCAACTGTGGAGATGATGC...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTCACCGTCAGTGAGGTaGGGCCAACTGCATCATCTC +
Preference number: 5 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTSPSVR*GQLHHL
Trigger: GAGATGATGCAGTTGGCCCAACCTCACTGACGGTGA...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTCCCCCTCCGTTGAGCTaGTTGGTGAGCTTGACTTTG +
Preference number: 5 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPPPPLS*LVSLTL
Trigger: CAAAGTCAAGCTCACCAACAAGCTCAACGGAGGGGG...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTTTGGGAGTACCCAGGTaGCTGGCTGTCTCCGGGTTC +
Preference number: 5 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFLGVPR*LAVSGF
Trigger: GAACCCGGAGACAGCCAGCAACCTGGGTACTCCCAA...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTTCACCGTCAGTGAGGTaGGGCCAACTGCATCATCTC +
Preference number: 5 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPSPSVR*GQLHHL
Trigger: GAGATGATGCAGTTGGCCCAACCTCACTGACGGTGA...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCCCCCCTCCGTTGAGCTaGTTGGTGAGCTTGACTTTG +
Preference number: 5 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFPPPLS*LVSLTL
Trigger: CAAAGTCAAGCTCACCAACAAGCTCAACGGAGGGGG...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCCCCCTCCGTTGAGCTaGTTGGTGAGCTTGACTTTG +
Preference number: 5 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFPPPLS*LVSLTL
Trigger: CAAAGTCAAGCTCACCAACAAGCTCAACGGAGGGGG...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCAGTTGTCAGAATAGGTaGGAGAATTGTTCCGATGAG +
Preference number: 5 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCSCQNR*ENCSDE
Trigger: CTCATCGGAACAATTCTCCAACCTATTCTGACAACT...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366876.7
CDS-3UTR CAA 90 bp CAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCGAGAAGTTATTCCACTaGAACTCCCCAAGGCTCTAC +
Preference number: 5 (lower is better)
Translates to: QSSHHWLPRQKVTASFGTEKLFH*NSPRLY
Trigger: GTAGAGCCTTGGGGAGTTCAAGTGGAATAACTTCTC...GGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366876.7
CDS-3UTR CAA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTTGCTCCTCCACTGCTTaGAAAAGGAAGTTACTGAGG +
Preference number: 5 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPCSSTA*KRKLLR
Trigger: CCTCAGTAACTTCCTTTTCAAAGCAGTGGAGGAGCA...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp GTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGCATCATCTCCACAGTaGGGTTCATCTGTAAGCCAC +
Preference number: 5 (lower is better)
Translates to: VGQSSHHWLPRQKVTASFASSPQ*GSSVSH
Trigger: GTGGCTTACAGATGAACCCAACTGTGGAGATGATGC...GAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp ACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTGGGCCTTGCTGCCTCAACTCTAACTACTaGAAAGCAACAAGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: TGCHDKKSLHLSGPGPCCLNSNY*KATRKK
Trigger: CTTCTTCCTTGTTGCTTTCAAGTAGTTAGAGTTGAG...GCAGCAAGGCCCAGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTGTTGTCAGAATAGGATaGGGAGTACCCAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFVVRIG*GVPRLL
Trigger: CAGCAACCTGGGTACTCCCAATCCTATTCTGACAAC...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366871.7
CDS-3UTR CAA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTTGCTCCTCCACTGCTTaGAAAAGGAAGTTACTGAGG +
Preference number: 5 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFCSSTA*KRKLLR
Trigger: CCTCAGTAACTTCCTTTTCAAAGCAGTGGAGGAGCA...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp AATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCGGGACCTCTCAACTCTAACTACTaGAAAGCAACAAGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: NPVTTGCHDKKSLHLSGPLNSNY*KATRKK
Trigger: CTTCTTCCTTGTTGCTTTCAAGTAGTTAGAGTTGAG...AGGTCCCGAAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS-3UTR CAA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTAGTTGTCAGAATAGGTaGGAGAATTGTTCCGATGAG +
Preference number: 5 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFSCQNR*ENCSDE
Trigger: CTCATCGGAACAATTCTCCAACCTATTCTGACAACT...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366876.7
CDS-3UTR CAA 90 bp AGTAGGTCAATCCAGTCACCACTGGCTGCCACGACAAAAAGTCACTGCATCTTTCTCAACTCTAACTACTaGAAAGCAACAAGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: SRSIQSPLAATTKSHCIFLNSNY*KATRKK
Trigger: CTTCTTCCTTGTTGCTTTCAAGTAGTTAGAGTTGAG...AAAGATGCAGTGACTTTTTGTCGTGGCAGCCAGTGGTGACTGGATTGACCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS CCA 72 bp GGCGCGCCTCCCTCCCCTCCCAGGGACGAGCGCATTTaGCCGGGCTTTGGGATGCGCCGCGCTCGTCTCGCC +
Preference number: 6 (lower is better)
Translates to: GAPPSPPRDERI*PGFGMRRARLA
Trigger: GGCGAGACGAGCGCGGCGCATCCCAAAGCCCGGCCAAATGCGCTCGTCCCTGGGAGGGGAGGGAGGCGCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS GCA 72 bp CCGGAAGAACTGGGCCCCCAGCCCGTTGGACACGGCTaGTGCCTGGGAGCCCGGGGTGACGGCGCCGTTGCT +
Preference number: 6 (lower is better)
Translates to: PEELGPQPVGHG*CLGARGDGAVA
Trigger: AGCAACGGCGCCGTCACCCCGGGCTCCCAGGCAGCAGCCGTGTCCAACGGGCTGGGGGCCCAGTTCTTCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS CAA 72 bp AGGCGCGCCTCCCTCCCCTCCCAGGGACGAGCGCATTaGGCCGGGCTTTGGGATGCGCCGCGCTCGTCTCGC +
Preference number: 6 (lower is better)
Translates to: RRASLPSQGRAH*AGLWDAPRSSR
Trigger: GCGAGACGAGCGCGGCGCATCCCAAAGCCCGGCCAAATGCGCTCGTCCCTGGGAGGGGAGGGAGGCGCGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS TCA 72 bp GCCCGTTGGACACGGCTGCTGCCTGGGAGCCCGGGGTaGCGGCGCCGTTGCTCACAGACCACAGGCTGGGGT +
Preference number: 6 (lower is better)
Translates to: ARWTRLLPGSPG*RRRCSQTTGWG
Trigger: ACCCCAGCCTGTGGTCTGTGAGCAACGGCGCCGTCACCCCGGGCTCCCAGGCAGCAGCCGTGTCCAACGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS GCA 72 bp GAAGAACTGGGCCCCCAGCCCGTTGGACACGGCTGCTaGCTGGGAGCCCGGGGTGACGGCGCCGTTGCTCAC +
Preference number: 6 (lower is better)
Translates to: EELGPQPVGHGC*LGARGDGAVAH
Trigger: GTGAGCAACGGCGCCGTCACCCCGGGCTCCCAGGCAGCAGCCGTGTCCAACGGGCTGGGGGCCCAGTTCTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS CCA 72 bp AACTGGGCCCCCAGCCCGTTGGACACGGCTGCTGCCTaGGAGCCCGGGGTGACGGCGCCGTTGCTCACAGAC +
Preference number: 6 (lower is better)
Translates to: NWAPSPLDTAAA*EPGVTAPLLTD
Trigger: GTCTGTGAGCAACGGCGCCGTCACCCCGGGCTCCCAGGCAGCAGCCGTGTCCAACGGGCTGGGGGCCCAGTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS GCA 72 bp GGCGGCGTTACGCACACCCAGGATCGTGGATCAGCCTaGCCCGGCGTCGGGTGTCCCCGCGGCTCTCACCAT +
Preference number: 6 (lower is better)
Translates to: GGVTHTQDRGSA*PGVGCPRGSHH
Trigger: ATGGTGAGAGCCGCGGGGACACCCGACGCCGGGGCAGGCTGATCCACGATCCTGGGTGTGCGTAACGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS CCA 72 bp GAGGCTATGAGGCGGCCTTGGGCTGCGGCGTCGTACTaGCTGTCCACGATGTCTGTGGCCGCGGCCGCCCCT +
Preference number: 6 (lower is better)
Translates to: EAMRRPWAAASY*LSTMSVAAAAP
Trigger: AGGGGCGGCCGCGGCCACAGACATCGTGGACAGCCAGTACGACGCCGCAGCCCAAGGCCGCCTCATAGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS CCA 72 bp CACGATGTCTGTGGCCGCGGCCGCCCCTTCGTACAGTaGGGATCCCGAGGAAGAGGGCGCCGAGACCGGATG +
Preference number: 6 (lower is better)
Translates to: HDVCGRGRPFVQ*GSRGRGRRDRM
Trigger: CATCCGGTCTCGGCGCCCTCTTCCTCGGGATCCCCACTGTACGAAGGGGCGGCCGCGGCCACAGACATCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296946.6
ENST00000366871.7
ENST00000366876.7
CDS CCA 72 bp CTCCCCTCCCAGGGACGAGCGCATTTGGCCGGGCTTTaGGATGCGCCGCGCTCGTCTCGCCGCAGTAGTAGT +
Preference number: 6 (lower is better)
Translates to: LPSQGRAHLAGL*DAPRSSRRSSS
Trigger: ACTACTACTGCGGCGAGACGAGCGCGGCGCATCCCAAAGCCCGGCCAAATGCGCTCGTCCCTGGGAGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS GCA 72 bp TCCGATGCCTCAACTCTCCAGTCTGGCAGTTTCCGGTaGACCTGTCCCCACACGTCCCTCGCCCACGGAGCC +
Preference number: 6 (lower is better)
Translates to: SDASTLQSGSFR*TCPHTSLAHGA
Trigger: GGCTCCGTGGGCGAGGGACGTGTGGGGACAGGTGCACCGGAAACTGCCAGACTGGAGAGTTGAGGCATCGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS GCA 72 bp CGAAGCCCAGACTCGCTACCTGAGATCCACCTTCCCTaGTCTTGGCCGCCGCCCTTCCGAGAAAAGGGGCCC +
Preference number: 6 (lower is better)
Translates to: RSPDSLPEIHLP*SWPPPFREKGP
Trigger: GGGCCCCTTTTCTCGGAAGGGCGGCGGCCAAGAGCAGGGAAGGTGGATCTCAGGTAGCGAGTCTGGGCTTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366876.7
CDS CCA 72 bp CTGTTCTCGCGCCTCCGATGCCTCAACTCTCCAGTCTaGCAGTTTCCGGTGCACCTGTCCCCACACGTCCCT +
Preference number: 6 (lower is better)
Translates to: LFSRLRCLNSPV*QFPVHLSPHVP
Trigger: AGGGACGTGTGGGGACAGGTGCACCGGAAACTGCCAGACTGGAGAGTTGAGGCATCGGAGGCGCGAGAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS GCA 72 bp CTCGCCGCAGTAGTAGTGCTGTTCTCGCGCCTCCGATaGCTCAACTCTCCAGTCTGGCAGTTTCCGGTGCAC +
Preference number: 6 (lower is better)
Translates to: LAAVVVLFSRLR*LNSPVWQFPVH
Trigger: GTGCACCGGAAACTGCCAGACTGGAGAGTTGAGGCATCGGAGGCGCGAGAACAGCACTACTACTGCGGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296946.6
ENST00000366871.7
CDS GCA 72 bp CGAAGCCCAGACTCGCTACCTGAGATCCACCTTCCCTaGTCTTGGCCGCCGCCCATCTGGAAAAGGAAGGTC +
Preference number: 6 (lower is better)
Translates to: RSPDSLPEIHLP*SWPPPIWKRKV
Trigger: GACCTTCCTTTTCCAGATGGGCGGCGGCCAAGAGCAGGGAAGGTGGATCTCAGGTAGCGAGTCTGGGCTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461348.2
CDS GCA 72 bp CCAGGAAGAAGCCACCCCCATTGGGAGTACCCAGGTTaGTGGCTGTCTCCGGGTTCCTCCATCATCTCTTTG +
Preference number: 6 (lower is better)
Translates to: PGRSHPHWEYPG*WLSPGSSIISL
Trigger: CAAAGAGATGATGGAGGAACCCGGAGACAGCCAGCAACCTGGGTACTCCCAATGGGGGTGGCTTCTTCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296946.6
CDS CAA 72 bp TCCAGGAAGAAGCCACCCCCATTGGGAGTACCCAGGTaGCTGGCTGTCTCCGGGTTCCTCCATCATCTCTTT +
Preference number: 6 (lower is better)
Translates to: SRKKPPPLGVPR*LAVSGFLHHLF
Trigger: AAAGAGATGATGGAGGAACCCGGAGACAGCCAGCAACCTGGGTACTCCCAATGGGGGTGGCTTCTTCCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296946.6