Pregenerated sensors for TBX10 (Homo sapiens)
Ensembl gene IDs: ENSG00000167800Ensembl transcript IDs: ENST00000335385.3, ENST00000335385.4
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTGCTGGGGTTGGGAGATAGAAGTCCTGGTTCCAAGCTTGCCATaGTCCCAGCCTTGCTGTGACCCTGGGCAGGTAGCCTCTTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: GCWGWEIEVLVPSLP*SQPCCDPGQVASFS Trigger: AGAGAAAGAGGCTACCTGCCCAGGGTCACAGCAAGGCTGGGACCATGGCAAGCTTGGAACCAGGACTTCTATCTCCCAACCCCAGCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335385.3 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGGTTTTCGGGAGTTACCCCCAAAGCAAGAGGGCACAGTATTCAGGCTGCGTCCCAGCCTTGCTGTaGCCCTGGGCAGGTAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: GRVFGSYPQSKRAQYSGCVPALL*PWAGSL Trigger: GAGGCTACCTGCCCAGGGTCACAGCAAGGCTGGGAC...GCAGCCTGAATACTGTGCCCTCTTGCTTTGGGGGTAACTCCCGAAAACCCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335385.3 |
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| 3UTR CAA 90 bp | TATTCAGGCTGCTGGGGTTGGGAGATAGAAGTCCTGGTTCCAAGCTaGCCATGGTCCCAGCCTTGCTGTGACCCTGGGCAGGTAGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: YSGCWGWEIEVLVPS*PWSQPCCDPGQVAS Trigger: AGAGGCTACCTGCCCAGGGTCACAGCAAGGCTGGGACCATGGCAAGCTTGGAACCAGGACTTCTATCTCCCAACCCCAGCAGCCTGAATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335385.3 |
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| 3UTR-3UTR CCA 90 bp | GGTAAGGCAGGGTTTTCGGGAGTTACCCCCAAAGCAAGAGGGCACAGTATTCAGGTTCCAAGCTTGCCATaGTCCCAGCCTTGCTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: GKAGFSGVTPKARGHSIQVPSLP*SQPCCD Trigger: GTCACAGCAAGGCTGGGACCATGGCAAGCTTGGAAC...CTGAATACTGTGCCCTCTTGCTTTGGGGGTAACTCCCGAAAACCCTGCCTTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335385.3 |
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| CDS CCA 90 bp | GGCACCCTTCAGCACACAGGGACTGAGGCTGCTGTGACTCCGGGCTaGGACACTGAGCAGGGGCCGTGGGGCCACAGGCCAGGAGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: GTLQHTGTEAAVTPG*DTEQGPWGHRPGVQ Trigger: CTGGACTCCTGGCCTGTGGCCCCACGGCCCCTGCTCAGTGTCCCAGCCCGGAGTCACAGCAGCCTCAGTCCCTGTGTGCTGAAGGGTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS TCA 90 bp | TCCCTGTCTGTGGCACCCTTCAGCACACAGGGACTGAGGCTGCTGTaGCTCCGGGCTGGGACACTGAGCAGGGGCCGTGGGGCCACAGGC | + |
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Preference number: 5 (lower is better) Translates to: SLSVAPFSTQGLRLL*LRAGTLSRGRGATG Trigger: GCCTGTGGCCCCACGGCCCCTGCTCAGTGTCCCAGCCCGGAGTCACAGCAGCCTCAGTCCCTGTGTGCTGAAGGGTGCCACAGACAGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS TCA 90 bp | GGATCCCTAGGTGGCTCGGGGCTCCAGAGTACAGGCTCTGATACGTaGCAGGCCTGTAGGTGGCCGGGGCCAGCAGGACCTCAGGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: GSLGGSGLQSTGSDT*QACRWPGPAGPQVG Trigger: CCCCACCTGAGGTCCTGCTGGCCCCGGCCACCTACAGGCCTGTCACGTATCAGAGCCTGTACTCTGGAGCCCCGAGCCACCTAGGGATCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS CCA 90 bp | CTACTCGAGCTGGACCCCTGGTCTCCGAAGGTGAGATGCAGGCTCTaGGGCGTGCAGCGGCCCTTCTCCAAGCCACTCTCGGGCTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: LLELDPWSPKVRCRL*GVQRPFSKPLSGCA Trigger: AGCACAGCCCGAGAGTGGCTTGGAGAAGGGCCGCTGCACGCCCCAGAGCCTGCATCTCACCTTCGGAGACCAGGGGTCCAGCTCGAGTAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS CCA 90 bp | ACACGTGGGTTCTTGGGGCCCTGCCCAGTGGGCTCGGCCACAGCTTaGGCCCCAGTAGAGCTGGTGCAAGGGCCTGATGGGAATGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: TRGFLGPCPVGSATA*APVELVQGPDGNGD Trigger: GTCACCATTCCCATCAGGCCCTTGCACCAGCTCTACTGGGGCCCAAGCTGTGGCCGAGCCCACTGGGCAGGGCCCCAAGAACCCACGTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS TCA 90 bp | AGGTCGTGGTCTTCCTACTCGAGCTGGACCCCTGGTCTCCGAAGGTaGGATGCAGGCTCTGGGGCGTGCAGCGGCCCTTCTCCAAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: RSWSSYSSWTPGLRR*DAGSGACSGPSPSH Trigger: GTGGCTTGGAGAAGGGCCGCTGCACGCCCCAGAGCCTGCATCTCACCTTCGGAGACCAGGGGTCCAGCTCGAGTAGGAAGACCACGACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS TCA 90 bp | CGGCAGGACGGTCCTTGCCTCCTCGATCGCCCTTCGTCCACGTCCTaGGGTCGTGGTCTTCCTACTCGAGCTGGACCCCTGGTCTCCGAA | + |
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Preference number: 5 (lower is better) Translates to: RQDGPCLLDRPSSTS*GRGLPTRAGPLVSE Trigger: TTCGGAGACCAGGGGTCCAGCTCGAGTAGGAAGACCACGACCTCAGGACGTGGACGAAGGGCGATCGAGGAGGCAAGGACCGTCCTGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS GCA 90 bp | GGCTGCCATGGAGACAGAGAGGCTGTCCGGCTCCTGGAGAAACACTaGTTGGCTGGGGCTGGGAACCTGCCTGCTGGAAGGGGTGGTCAC | + |
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Preference number: 5 (lower is better) Translates to: GCHGDREAVRLLEKH*LAGAGNLPAGRGGH Trigger: GTGACCACCCCTTCCAGCAGGCAGGTTCCCAGCCCCAGCCAAGCAGTGTTTCTCCAGGAGCCGGACAGCCTCTCTGTCTCCATGGCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS CCA 90 bp | CAGAGAGGCTGTCCGGCTCCTGGAGAAACACTGCTTGGCTGGGGCTaGGAACCTGCCTGCTGGAAGGGGTGGTCACCACTCGTCCACTCG | + |
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Preference number: 5 (lower is better) Translates to: QRGCPAPGETLLGWG*EPACWKGWSPLVHS Trigger: CGAGTGGACGAGTGGTGACCACCCCTTCCAGCAGGCAGGTTCCCAGCCCCAGCCAAGCAGTGTTTCTCCAGGAGCCGGACAGCCTCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS CCA 90 bp | GCCATGGAGACAGAGAGGCTGTCCGGCTCCTGGAGAAACACTGCTTaGCTGGGGCTGGGAACCTGCCTGCTGGAAGGGGTGGTCACCACT | + |
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Preference number: 5 (lower is better) Translates to: AMETERLSGSWRNTA*LGLGTCLLEGVVTT Trigger: AGTGGTGACCACCCCTTCCAGCAGGCAGGTTCCCAGCCCCAGCCAAGCAGTGTTTCTCCAGGAGCCGGACAGCCTCTCTGTCTCCATGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS CCA 90 bp | CCACAGAGGCTTCATCTCCAGCTGAACTGTCACTCTGGACACACGTaGGTTCTTGGGGCCCTGCCCAGTGGGCTCGGCCACAGCTTGGGC | + |
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Preference number: 5 (lower is better) Translates to: PQRLHLQLNCHSGHT*VLGALPSGLGHSLG Trigger: GCCCAAGCTGTGGCCGAGCCCACTGGGCAGGGCCCCAAGAACCCACGTGTGTCCAGAGTGACAGTTCAGCTGGAGATGAAGCCTCTGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS CCA 90 bp | CAGCTGGGAGAGGCAGGCCTCCTTGATCCCTATCAGCCCGGATGTTaGGGAGGGGGTATGGTGCTGGTCGGGTCCTTGGGATCCCTAGGT | + |
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Preference number: 5 (lower is better) Translates to: QLGEAGLLDPYQPGC*GGGMVLVGSLGSLG Trigger: ACCTAGGGATCCCAAGGACCCGACCAGCACCATACCCCCTCCCCAACATCCGGGCTGATAGGGATCAAGGAGGCCTGCCTCTCCCAGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS CCA 72 bp | TTCTTGGGGCCCTGCCCAGTGGGCTCGGCCACAGCTTaGGCCCCAGTAGAGCTGGTGCAAGGGCCTGATGGG | + |
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Preference number: 6 (lower is better) Translates to: FLGPCPVGSATA*APVELVQGPDG Trigger: CCCATCAGGCCCTTGCACCAGCTCTACTGGGGCCCAAGCTGTGGCCGAGCCCACTGGGCAGGGCCCCAAGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS TCA 72 bp | GGTGGCTCGGGGCTCCAGAGTACAGGCTCTGATACGTaGCAGGCCTGTAGGTGGCCGGGGCCAGCAGGACCT | + |
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Preference number: 6 (lower is better) Translates to: GGSGLQSTGSDT*QACRWPGPAGP Trigger: AGGTCCTGCTGGCCCCGGCCACCTACAGGCCTGTCACGTATCAGAGCCTGTACTCTGGAGCCCCGAGCCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS CCA 72 bp | CTGGACCCCTGGTCTCCGAAGGTGAGATGCAGGCTCTaGGGCGTGCAGCGGCCCTTCTCCAAGCCACTCTCG | + |
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Preference number: 6 (lower is better) Translates to: LDPWSPKVRCRL*GVQRPFSKPLS Trigger: CGAGAGTGGCTTGGAGAAGGGCCGCTGCACGCCCCAGAGCCTGCATCTCACCTTCGGAGACCAGGGGTCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS GCA 72 bp | ACTGTCACTCTGGACACACGTGGGTTCTTGGGGCCCTaGCCAGTGGGCTCGGCCACAGCTTGGGCCCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: TVTLDTRGFLGP*PVGSATAWAPV Trigger: TACTGGGGCCCAAGCTGTGGCCGAGCCCACTGGGCAGGGCCCCAAGAACCCACGTGTGTCCAGAGTGACAGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS CCA 72 bp | CCAGCTGAACTGTCACTCTGGACACACGTGGGTTCTTaGGGCCCTGCCCAGTGGGCTCGGCCACAGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: PAELSLWTHVGS*GPAQWARPQLG Trigger: CCCAAGCTGTGGCCGAGCCCACTGGGCAGGGCCCCAAGAACCCACGTGTGTCCAGAGTGACAGTTCAGCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS TCA 72 bp | GGTCCTTGCCTCCTCGATCGCCCTTCGTCCACGTCCTaGGGTCGTGGTCTTCCTACTCGAGCTGGACCCCTG | + |
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Preference number: 6 (lower is better) Translates to: GPCLLDRPSSTS*GRGLPTRAGPL Trigger: CAGGGGTCCAGCTCGAGTAGGAAGACCACGACCTCAGGACGTGGACGAAGGGCGATCGAGGAGGCAAGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS CCA 72 bp | CCTCCTCGATCGCCCTTCGTCCACGTCCTGAGGTCGTaGTCTTCCTACTCGAGCTGGACCCCTGGTCTCCGA | + |
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Preference number: 6 (lower is better) Translates to: PPRSPFVHVLRS*SSYSSWTPGLR Trigger: TCGGAGACCAGGGGTCCAGCTCGAGTAGGAAGACCACGACCTCAGGACGTGGACGAAGGGCGATCGAGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS CCA 72 bp | TGTCCGGCTCCTGGAGAAACACTGCTTGGCTGGGGCTaGGAACCTGCCTGCTGGAAGGGGTGGTCACCACTC | + |
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Preference number: 6 (lower is better) Translates to: CPAPGETLLGWG*EPACWKGWSPL Trigger: GAGTGGTGACCACCCCTTCCAGCAGGCAGGTTCCCAGCCCCAGCCAAGCAGTGTTTCTCCAGGAGCCGGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS CCA 72 bp | GAGGCAGGCCTCCTTGATCCCTATCAGCCCGGATGTTaGGGAGGGGGTATGGTGCTGGTCGGGTCCTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: EAGLLDPYQPGC*GGGMVLVGSLG Trigger: TCCCAAGGACCCGACCAGCACCATACCCCCTCCCCAACATCCGGGCTGATAGGGATCAAGGAGGCCTGCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS CAA 90 bp | CCCTCAGGTGCTCACACAAGCTGTAGTCTCTCGGCAGGACGGTCCTaGCCTCCTCGATCGCCCTTCGTCCACGTCCTGAGGTCGTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: PSGAHTSCSLSAGRS*PPRSPFVHVLRSWS Trigger: AGACCACGACCTCAGGACGTGGACGAAGGGCGATCGAGGAGGCAAGGACCGTCCTGCCGAGAGACTACAGCTTGTGTGAGCACCTGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS CCA 72 bp | CTTCATCTCCAGCTGAACTGTCACTCTGGACACACGTaGGTTCTTGGGGCCCTGCCCAGTGGGCTCGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LHLQLNCHSGHT*VLGALPSGLGH Trigger: GTGGCCGAGCCCACTGGGCAGGGCCCCAAGAACCCACGTGTGTCCAGAGTGACAGTTCAGCTGGAGATGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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| CDS CAA 72 bp | GCTCACACAAGCTGTAGTCTCTCGGCAGGACGGTCCTaGCCTCCTCGATCGCCCTTCGTCCACGTCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: AHTSCSLSAGRS*PPRSPFVHVLR Trigger: CCTCAGGACGTGGACGAAGGGCGATCGAGGAGGCAAGGACCGTCCTGCCGAGAGACTACAGCTTGTGTGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335385.4 |
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