RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000136535

Ensembl transcript IDs: ENST00000389554.8, ENST00000410035.1, ENST00000411412.5, ENST00000463544.1, ENST00000477804.5, ENST00000489530.1

Found 281 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGCTGGGTGGGTCCAGGTTCTAGAGTCAACATCCTATGGTTAATGTaGAGGCCGAGACTTGGCGGGTCGGAATCGCTGCTGCCTGACAGG +
Preference number: 1 (lower is better)
Translates to: RWVGPGSRVNILWLM*RPRLGGSESLLPDR
Trigger: CCTGTCAGGCAGCAGCGATTCCGACCCGCCAAGTCTCGGCCTCCACATTAACCATAGGATGTTGACTCTAGAACCTGGACCCACCCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR CCA 90 bp GAAAGGACGCGCTGGGTGGGTCCAGGTTCTAGAGTCAACATCCTATaGTTAATGTGGAGGCCGAGACTTGGCGGGTCGGAATCGCTGCTG +
Preference number: 1 (lower is better)
Translates to: ERTRWVGPGSRVNIL*LMWRPRLGGSESLL
Trigger: CAGCAGCGATTCCGACCCGCCAAGTCTCGGCCTCCACATTAACCATAGGATGTTGACTCTAGAACCTGGACCCACCCAGCGCGTCCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR TCA 90 bp GTTAATGTGGAGGCCGAGACTTGGCGGGTCGGAATCGCTGCTGCCTaGCAGGACTGCCCAGGTCTCCTAAAGGTGAAGAGTTTCATTACA +
Preference number: 1 (lower is better)
Translates to: VNVEAETWRVGIAAA*QDCPGLLKVKSFIT
Trigger: TGTAATGAAACTCTTCACCTTTAGGAGACCTGGGCAGTCCTGTCAGGCAGCAGCGATTCCGACCCGCCAAGTCTCGGCCTCCACATTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR GCA 90 bp CTCCTTAGCTATTTGTGTGCATTAGGGCACATAGTAATTATTTCATaGAACGGATTGAGGAGAAGTGGGAAACCCATCACTACTGAGTAT +
Preference number: 1 (lower is better)
Translates to: LLSYLCALGHIVIIS*NGLRRSGKPITTEY
Trigger: ATACTCAGTAGTGATGGGTTTCCCACTTCTCCTCAATCCGTTGCATGAAATAATTACTATGTGCCCTAATGCACACAAATAGCTAAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR TCA 90 bp AGTATTCATTACAAAGATTTACAGCATATAAAGGTGAAGGGGTACTaGAAGATATTCAGAAACAGTTTGTCAGCATATTTGGCACCTGCA +
Preference number: 1 (lower is better)
Translates to: SIHYKDLQHIKVKGY*KIFRNSLSAYLAPA
Trigger: TGCAGGTGCCAAATATGCTGACAAACTGTTTCTGAATATCTTTCAGTACCCCTTCACCTTTATATGCTGTAAATCTTTGTAATGAATACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR-3UTR CCA 90 bp AGTTTGTCAGCATATTTGGCACCTGCACAGACCAGTAATGGATTTGGCACTTTGGTGGGGAGGCGGAGCTaGGGAAGAGCTGTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: SLSAYLAPAQTSNGFGTLVGRRS*GRAVRG
Trigger: GCCCCTCACAGCTCTTCCCCAGCTCCGCCTCCCCAC...CAAAGTGCCAAATCCATTACTGGTCTGTGCAGGTGCCAAATATGCTGACAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR-3UTR TCA 90 bp AGTTTGTCAGCATATTTGGCACCTGCACAGACCAGTAATGGATTTGGCACTTTGGGAATCGCTGCTGCCTaGCAGGACTGCCCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: SLSAYLAPAQTSNGFGTLGIAAA*QDCPGL
Trigger: GAGACCTGGGCAGTCCTGTCAGGCAGCAGCGATTCC...CAAAGTGCCAAATCCATTACTGGTCTGTGCAGGTGCCAAATATGCTGACAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR-3UTR CCA 90 bp AGTAGGAAAACCAAAAGGTTTACAGCAAAGTTGAAGGTCGGTGAGCTAATTGCAGCGCAAGGAGGAGTGTaGGGAGGCGGAGCTGGGGAA +
Preference number: 2 (lower is better)
Translates to: SRKTKRFTAKLKVGELIAAQGGV*GGGAGE
Trigger: TTCCCCAGCTCCGCCTCCCCACACTCCTCCTTGCGC...TGCAATTAGCTCACCGACCTTCAACTTTGCTGTAAACCTTTTGGTTTTCCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR-3UTR TCA 90 bp AAAGACGAGGGGGAGGGGAATTGTAGGAGGATAACTCCACAGAAGAAGAGTAAGAAAGTTGAAGGTCGGTaGGCTAATTGCAGAGACTGC +
Preference number: 2 (lower is better)
Translates to: KDEGEGNCRRITPQKKSKKVEGR*ANCRDC
Trigger: GCAGTCTCTGCAATTAGCTCACCGACCTTCAACTTT...CTTACTCTTCTTCTGTGGAGTTATCCTCCTACAATTCCCCTCCCCCTCGTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR-3UTR GCA 90 bp AGTAGGAAAACCAAAAGGTTTACAGCAAAGTTGAAGGTCGGTGAGCTAATTGCACCTGCACTTATTCGCTaGAGACGGCCATCGAGGGTC +
Preference number: 2 (lower is better)
Translates to: SRKTKRFTAKLKVGELIAPALIR*RRPSRV
Trigger: GACCCTCGATGGCCGTCTGCAGCGAATAAGTGCAGG...TGCAATTAGCTCACCGACCTTCAACTTTGCTGTAAACCTTTTGGTTTTCCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR-3UTR CCA 90 bp CACTTAATCGACTTGCCTATGAACAGACACCTATCCTTTAAAGGTGTTTGGGTGAAAGGACGCGCTGGGTaGGTCCAGGTTCTAGAGTCA +
Preference number: 2 (lower is better)
Translates to: HLIDLPMNRHLSFKGVWVKGRAG*VQVLES
Trigger: TGACTCTAGAACCTGGACCCACCCAGCGCGTCCTTT...CACCCAAACACCTTTAAAGGATAGGTGTCTGTTCATAGGCAAGTCGATTAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR-3UTR CCA 90 bp AAGGTGTTTGGGTGGATTCTCCTTAGCTATTTGTGTGCATTAGGGCACATAGTAATCCTATGGTTAATGTaGAGGCCGAGACTTGGCGGG +
Preference number: 2 (lower is better)
Translates to: KVFGWILLSYLCALGHIVILWLM*RPRLGG
Trigger: CCCGCCAAGTCTCGGCCTCCACATTAACCATAGGAT...TACTATGTGCCCTAATGCACACAAATAGCTAAGGAGAATCCACCCAAACACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR CAA 90 bp ACTCCAGTTGACTTTGCTTTGCAGGCATCATGCCACTTAATCGACTaGCCTATGAACAGACACCTATCCTTTAAAGGTGTTTGGGTGGAT +
Preference number: 2 (lower is better)
Translates to: TPVDFALQASCHLID*PMNRHLSFKGVWVD
Trigger: ATCCACCCAAACACCTTTAAAGGATAGGTGTCTGTTCATAGGCAAGTCGATTAAGTGGCATGATGCCTGCAAAGCAAAGTCAACTGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR-3UTR TCA 90 bp AGAAGAAGAGTAAGTAGGAAAACCAAAAGGTTTACAGCAAAGTTGAAGGTCGGTGAGGGTCAAATAAAATaGGTGGGTGCGCAAGGAGGA +
Preference number: 2 (lower is better)
Translates to: RRRVSRKTKRFTAKLKVGEGQIK*VGAQGG
Trigger: TCCTCCTTGCGCACCCACTCATTTTATTTGACCCTC...ACCGACCTTCAACTTTGCTGTAAACCTTTTGGTTTTCCTACTTACTCTTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR-3UTR GCA 90 bp AGAAGAAGAGTAAGTAGGAAAACCAAAAGGTTTACAGCAAAGTTGAAGGTCGGTAATAAAATGAGTGGGTaGGCAAGGAGGAGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: RRRVSRKTKRFTAKLKVGNKMSG*ARRSVG
Trigger: CCCCACACTCCTCCTTGCGCACCCACTCATTTTATT...ACCGACCTTCAACTTTGCTGTAAACCTTTTGGTTTTCCTACTTACTCTTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR CAA 90 bp GACACCTATCCTTTAAAGGTGTTTGGGTGGATTCTCCTTAGCTATTaGTGTGCATTAGGGCACATAGTAATTATTTCATGCAACGGATTG +
Preference number: 2 (lower is better)
Translates to: DTYPLKVFGWILLSY*CALGHIVIISCNGL
Trigger: CAATCCGTTGCATGAAATAATTACTATGTGCCCTAATGCACACAAATAGCTAAGGAGAATCCACCCAAACACCTTTAAAGGATAGGTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR CAA 90 bp TATTTGTGTGCATTAGGGCACATAGTAATTATTTCATGCAACGGATaGAGGAGAAGTGGGAAACCCATCACTACTGAGTATTTCATGTTT +
Preference number: 2 (lower is better)
Translates to: YLCALGHIVIISCNG*RRSGKPITTEYFMF
Trigger: AAACATGAAATACTCAGTAGTGATGGGTTTCCCACTTCTCCTCAATCCGTTGCATGAAATAATTACTATGTGCCCTAATGCACACAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR-3UTR CCA 90 bp TTTACAGCATATAAAGGTGAAGGGGTACTGAAAGATATTCAGAAACAGTTTGTCAGGTTAAGCATGAACTaGTTTTGTGCCTTGACGAGA +
Preference number: 2 (lower is better)
Translates to: FTAYKGEGVLKDIQKQFVRLSMN*FCALTR
Trigger: TCTCGTCAAGGCACAAAACCAGTTCATGCTTAACCT...GACAAACTGTTTCTGAATATCTTTCAGTACCCCTTCACCTTTATATGCTGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR TCA 72 bp GAGGCCGAGACTTGGCGGGTCGGAATCGCTGCTGCCTaGCAGGACTGCCCAGGTCTCCTAAAGGTGAAGAGT +
Preference number: 3 (lower is better)
Translates to: EAETWRVGIAAA*QDCPGLLKVKS
Trigger: ACTCTTCACCTTTAGGAGACCTGGGCAGTCCTGTCAGGCAGCAGCGATTCCGACCCGCCAAGTCTCGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR GCA 72 bp TGTGGAGGCCGAGACTTGGCGGGTCGGAATCGCTGCTaGCTGACAGGACTGCCCAGGTCTCCTAAAGGTGAA +
Preference number: 3 (lower is better)
Translates to: CGGRDLAGRNRC*LTGLPRSPKGE
Trigger: TTCACCTTTAGGAGACCTGGGCAGTCCTGTCAGGCAGCAGCGATTCCGACCCGCCAAGTCTCGGCCTCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR CCA 72 bp CGCTGGGTGGGTCCAGGTTCTAGAGTCAACATCCTATaGTTAATGTGGAGGCCGAGACTTGGCGGGTCGGAA +
Preference number: 3 (lower is better)
Translates to: RWVGPGSRVNIL*LMWRPRLGGSE
Trigger: TTCCGACCCGCCAAGTCTCGGCCTCCACATTAACCATAGGATGTTGACTCTAGAACCTGGACCCACCCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR CCA 72 bp GGTCCAGGTTCTAGAGTCAACATCCTATGGTTAATGTaGAGGCCGAGACTTGGCGGGTCGGAATCGCTGCTG +
Preference number: 3 (lower is better)
Translates to: GPGSRVNILWLM*RPRLGGSESLL
Trigger: CAGCAGCGATTCCGACCCGCCAAGTCTCGGCCTCCACATTAACCATAGGATGTTGACTCTAGAACCTGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR-3UTR CAA 90 bp AGTTTGTCAGCATATTTGGCACCTGCACAGACCAGTAATGGATTTGGCACTTTGCCAGTTGACTTTGCTTaGCAGGCATCATGCCACTTA +
Preference number: 3 (lower is better)
Translates to: SLSAYLAPAQTSNGFGTLPVDFA*QASCHL
Trigger: TAAGTGGCATGATGCCTGCAAAGCAAAGTCAACTGG...CAAAGTGCCAAATCCATTACTGGTCTGTGCAGGTGCCAAATATGCTGACAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR GCA 72 bp CATACAACTCCAGTTGACTTTGCTTTGCAGGCATCATaGCACTTAATCGACTTGCCTATGAACAGACACCTA +
Preference number: 3 (lower is better)
Translates to: HTTPVDFALQAS*HLIDLPMNRHL
Trigger: TAGGTGTCTGTTCATAGGCAAGTCGATTAAGTGGCATGATGCCTGCAAAGCAAAGTCAACTGGAGTTGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR-3UTR CAA 90 bp TTTGCAGGCATCATGCCACTTAATCGACTTGCCTATGAACAGACACCTATCCTTAGGTTTACAGCAAAGTaGAAGGTCGGTGAGCTAATT +
Preference number: 3 (lower is better)
Translates to: FAGIMPLNRLAYEQTPILRFTAK*KVGELI
Trigger: AATTAGCTCACCGACCTTCAACTTTGCTGTAAACCT...AAGGATAGGTGTCTGTTCATAGGCAAGTCGATTAAGTGGCATGATGCCTGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR-3UTR CAA 90 bp ACTGAAAGATATTCAGAAACAGTTTGTCAGCATATTTGGCACCTGCACAGACCAAACTGGTTTTGTGCCTaGACGAGAATAAAAACTAGC +
Preference number: 3 (lower is better)
Translates to: TERYSETVCQHIWHLHRPNWFCA*TRIKTS
Trigger: GCTAGTTTTTATTCTCGTCAAGGCACAAAACCAGTT...TGGTCTGTGCAGGTGCCAAATATGCTGACAAACTGTTTCTGAATATCTTTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR GCA 72 bp TATTTGTGTGCATTAGGGCACATAGTAATTATTTCATaGAACGGATTGAGGAGAAGTGGGAAACCCATCACT +
Preference number: 3 (lower is better)
Translates to: YLCALGHIVIIS*NGLRRSGKPIT
Trigger: AGTGATGGGTTTCCCACTTCTCCTCAATCCGTTGCATGAAATAATTACTATGTGCCCTAATGCACACAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR-3UTR CAA 90 bp TTTACAGCATATAAAGGTGAAGGGGTACTGAAAGATATTCAGAAACAGTTTGTCAAGCATGAACTGGTTTaGTGCCTTGACGAGAATAAA +
Preference number: 3 (lower is better)
Translates to: FTAYKGEGVLKDIQKQFVKHELV*CLDENK
Trigger: TTTATTCTCGTCAAGGCACAAAACCAGTTCATGCTT...GACAAACTGTTTCTGAATATCTTTCAGTACCCCTTCACCTTTATATGCTGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR-3UTR CAA 90 bp TTTACAGCATATAAAGGTGAAGGGGTACTGAAAGATATTCAGAAACAGTTTGTCATTCTCCTTAGCTATTaGTGTGCATTAGGGCACATA +
Preference number: 3 (lower is better)
Translates to: FTAYKGEGVLKDIQKQFVILLSY*CALGHI
Trigger: TATGTGCCCTAATGCACACAAATAGCTAAGGAGAAT...GACAAACTGTTTCTGAATATCTTTCAGTACCCCTTCACCTTTATATGCTGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp CACTTATTCGCTGCAGACGGCCATCGAGGGTCAAATAAAATGAGTGGGTGCGCAATGGAGAAGGCGGGGTaGGCCGGTCCGTGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: HLFAADGHRGSNKMSGCAMEKAG*AGPCWP
Trigger: CGGCCAGCACGGACCGGCGCACCCCGCCTTCTCCAT...TGCGCACCCACTCATTTTATTTGACCCTCGATGGCCGTCTGCAGCGAATAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp CACTTATTCGCTGCAGACGGCCATCGAGGGTCAAATAAAATGAGTGGGTGCGCAGCCCCGGGCACGATCTaGGAGCGCGGCGAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: HLFAADGHRGSNKMSGCAAPGTI*ERGESL
Trigger: CAACGACTCGCCGCGCTCGCAGATCGTGCCCGGGGC...TGCGCACCCACTCATTTTATTTGACCCTCGATGGCCGTCTGCAGCGAATAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp AAAAAGGTTAAAATCACGCTCGGAGACCTGCACTTATTCGCTGCAGACGGCCATGGGTGCGCCGGTCCGTaGTGGCCGGGGTACGGGAAC +
Preference number: 4 (lower is better)
Translates to: KKVKITLGDLHLFAADGHGCAGP*WPGYGN
Trigger: GTTCCCGTACCCCGGCCAGCACGGACCGGCGCACCC...ATGGCCGTCTGCAGCGAATAAGTGCAGGTCTCCGAGCGTGATTTTAACCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp CACTTATTCGCTGCAGACGGCCATCGAGGGTCAAATAAAATGAGTGGGTGCGCATGCGCCGGTCCGTGCTaGCCGGGGTACGGGAACATG +
Preference number: 4 (lower is better)
Translates to: HLFAADGHRGSNKMSGCACAGPC*PGYGNM
Trigger: CATGTTCCCGTACCCCGGCCAGCACGGACCGGCGCA...TGCGCACCCACTCATTTTATTTGACCCTCGATGGCCGTCTGCAGCGAATAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp AAAAAGGTTAAAATCACGCTCGGAGACCTGCACTTATTCGCTGCAGACGGCCATGGAAAGAGCCGGCCATaGCGTAGCGGGCCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: KKVKITLGDLHLFAADGHGKSRP*RSGPRA
Trigger: TGCCCGGGGCCCGCTACGCCATGGCCGGCTCTTTCC...ATGGCCGTCTGCAGCGAATAAGTGCAGGTCTCCGAGCGTGATTTTAACCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp AAAGACGAGGGGGAGGGGAATTGTAGGAGGATAACTCCACAGAAGAAGAGTAAGCCGAGCCCGACTTGGTaGCGCAGTACTGCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: KDEGEGNCRRITPQKKSKPSPTW*RSTAGD
Trigger: GTCCCCCGCAGTACTGCGGCACCAAGTCGGGCTCGG...CTTACTCTTCTTCTGTGGAGTTATCCTCCTACAATTCCCCTCCCCCTCGTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp GTGGGTCCAGGTTCTAGAGTCAACATCCTATGGTTAATGTGGAGGCCGAGACTTCGGGGTACGGGAACATaGCACTGGGAGCAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: VGPGSRVNILWLMWRPRLRGTGT*HWEQWP
Trigger: CGGCCACTGCTCCCAGTGCCATGTTCCCGTACCCCG...AAGTCTCGGCCTCCACATTAACCATAGGATGTTGACTCTAGAACCTGGACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp TTTGCAGGCATCATGCCACTTAATCGACTTGCCTATGAACAGACACCTATCCTTCGCCCAGGTAGGGATTaGCGCCGGCCATGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: FAGIMPLNRLAYEQTPILRPGRD*RRPCAR
Trigger: CCGCGCGCATGGCCGGCGCCAATCCCTACCTGGGCG...AAGGATAGGTGTCTGTTCATAGGCAAGTCGATTAAGTGGCATGATGCCTGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR TCA 90 bp AAAGACGAGGGGGAGGGGAATTGTAGGAGGATAACTCCACAGAAGAAGAGTAAGCCAGCACCTCGCTCTTaGGCGGGGACGAACTCTCGG +
Preference number: 4 (lower is better)
Translates to: KDEGEGNCRRITPQKKSKPAPRS*AGTNSR
Trigger: CCGAGAGTTCGTCCCCGCTCAAGAGCGAGGTGCTGG...CTTACTCTTCTTCTGTGGAGTTATCCTCCTACAATTCCCCTCCCCCTCGTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp GTGGGTCCAGGTTCTAGAGTCAACATCCTATGGTTAATGTGGAGGCCGAGACTTCCAGCCCCGGCTGGGTaGAGGAGAACTGGTAGAACG +
Preference number: 4 (lower is better)
Translates to: VGPGSRVNILWLMWRPRLPAPAG*RRTGRT
Trigger: CGTTCTACCAGTTCTCCTCCACCCAGCCGGGGCTGG...AAGTCTCGGCCTCCACATTAACCATAGGATGTTGACTCTAGAACCTGGACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp CACTTATTCGCTGCAGACGGCCATCGAGGGTCAAATAAAATGAGTGGGTGCGCAAGTCCAGCCGGTTGTTaGCCGGCGTCACAAACCAGC +
Preference number: 4 (lower is better)
Translates to: HLFAADGHRGSNKMSGCASPAGC*PASQTS
Trigger: GCTGGTTTGTGACGCCGGCCAACAACCGGCTGGACT...TGCGCACCCACTCATTTTATTTGACCCTCGATGGCCGTCTGCAGCGAATAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR TCA 90 bp CACTTATTCGCTGCAGACGGCCATCGAGGGTCAAATAAAATGAGTGGGTGCGCAGAGCCATCGAAACTGTaGCGAAGCTCAGAGACCCCG +
Preference number: 4 (lower is better)
Translates to: HLFAADGHRGSNKMSGCAEPSKL*RSSETP
Trigger: CGGGGTCTCTGAGCTTCGTCACAGTTTCGATGGCTC...TGCGCACCCACTCATTTTATTTGACCCTCGATGGCCGTCTGCAGCGAATAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR TCA 90 bp AAAGACGAGGGGGAGGGGAATTGTAGGAGGATAACTCCACAGAAGAAGAGTAAGGAGTCTCAGGGAAAGTaGACGTCTGCACGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: KDEGEGNCRRITPQKKSKESQGK*TSARGR
Trigger: CCGGCCGCGTGCAGACGTTCACTTTCCCTGAGACTC...CTTACTCTTCTTCTGTGGAGTTATCCTCCTACAATTCCCCTCCCCCTCGTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp AAAGACGAGGGGGAGGGGAATTGTAGGAGGATAACTCCACAGAAGAAGAGTAAGGGGAAAGTGAACGTCTaGACGCGGCCGGGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: KDEGEGNCRRITPQKKSKGKVNV*TRPGWL
Trigger: TAGCCAGCCCGGCCGCGTGCAGACGTTCACTTTCCC...CTTACTCTTCTTCTGTGGAGTTATCCTCCTACAATTCCCCTCCCCCTCGTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp AAGGTGTTTGGGTGGATTCTCCTTAGCTATTTGTGTGCATTAGGGCACATAGTATGCACGCGGCCGGGCTaGCTAGTGTCCTCCGTGCCG +
Preference number: 4 (lower is better)
Translates to: KVFGWILLSYLCALGHIVCTRPG*LVSSVP
Trigger: CGGCACGGAGGACACTAGCCAGCCCGGCCGCGTGCA...TACTATGTGCCCTAATGCACACAAATAGCTAAGGAGAATCCACCCAAACACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp AGTTTGTCAGCATATTTGGCACCTGCACAGACCAGTAATGGATTTGGCACTTTGGCACCGAGCCCGACTTaGTGCCGCAGTACTGCGGGG +
Preference number: 4 (lower is better)
Translates to: SLSAYLAPAQTSNGFGTLAPSPT*CRSTAG
Trigger: CCCCGCAGTACTGCGGCACCAAGTCGGGCTCGGTGC...CAAAGTGCCAAATCCATTACTGGTCTGTGCAGGTGCCAAATATGCTGACAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp AAAAAGGTTAAAATCACGCTCGGAGACCTGCACTTATTCGCTGCAGACGGCCATAATCGGACAGGTCCTTaGGCTTGGCGTCCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: KKVKITLGDLHLFAADGHNRTGP*AWRPRR
Trigger: CCGCCGAGGACGCCAAGCCCAAGGACCTGTCCGATT...ATGGCCGTCTGCAGCGAATAAGTGCAGGTCTCCGAGCGTGATTTTAACCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp AAAAAGGTTAAAATCACGCTCGGAGACCTGCACTTATTCGCTGCAGACGGCCATTTCTCGCAGTCCCGCTaGGCCAGCACCTCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: KKVKITLGDLHLFAADGHFSQSR*ASTSLL
Trigger: CAAGAGCGAGGTGCTGGCCCAGCGGGACTGCGAGAA...ATGGCCGTCTGCAGCGAATAAGTGCAGGTCTCCGAGCGTGATTTTAACCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp GTGGGTCCAGGTTCTAGAGTCAACATCCTATGGTTAATGTGGAGGCCGAGACTTGGGCCTTGGCGTAGTTaGTCACGAACTGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: VGPGSRVNILWLMWRPRLGPWRS*SRTGPA
Trigger: TGCAGGACCAGTTCGTGAGCAACTACGCCAAGGCCC...AAGTCTCGGCCTCCACATTAACCATAGGATGTTGACTCTAGAACCTGGACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp AGAAGAAGAGTAAGTAGGAAAACCAAAAGGTTTACAGCAAAGTTGAAGGTCGGTGCGGCCAGTGCAGCCTaGAGCCTGCAGCGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: RRRVSRKTKRFTAKLKVGAASAA*SLQRQR
Trigger: GCGCTGCCGCTGCAGGCTGCAGGCTGCACTGGCCGC...ACCGACCTTCAACTTTGCTGTAAACCTTTTGGTTTTCCTACTTACTCTTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp AGTTTGTCAGCATATTTGGCACCTGCACAGACCAGTAATGGATTTGGCACTTTGGTGGCCGTACTGCTGTaGGTAGGGGTAGCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: SLSAYLAPAQTSNGFGTLVAVLL*VGVAGR
Trigger: ACGGCCGGCTACCCCTACCCACAGCAGTACGGCCAC...CAAAGTGCCAAATCCATTACTGGTCTGTGCAGGTGCCAAATATGCTGACAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR TCA 90 bp AAAAAGGTTAAAATCACGCTCGGAGACCTGCACTTATTCGCTGCAGACGGCCATTGGAGTCGATGGACTTaGTCGAGGAGGGCGTCTCGA +
Preference number: 4 (lower is better)
Translates to: KKVKITLGDLHLFAADGHWSRWT*SRRASR
Trigger: TCGAGACGCCCTCCTCGATCAAGTCCATCGACTCCA...ATGGCCGTCTGCAGCGAATAAGTGCAGGTCTCCGAGCGTGATTTTAACCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp TTTGCAGGCATCATGCCACTTAATCGACTTGCCTATGAACAGACACCTATCCTTGCACAGGTACACCTGTaGTTTGCCGGGCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: FAGIMPLNRLAYEQTPILAQVHL*FAGHQP
Trigger: GGGCTGGTGCCCGGCAAAGCACAGGTGTACCTGTGC...AAGGATAGGTGTCTGTTCATAGGCAAGTCGATTAAGTGGCATGATGCCTGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp GTGGGTCCAGGTTCTAGAGTCAACATCCTATGGTTAATGTGGAGGCCGAGACTTGCCAAAGGGGCCTGTTaGACAGGTACACCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: VGPGSRVNILWLMWRPRLAKGAC*TGTPVL
Trigger: AAGCACAGGTGTACCTGTGCAACAGGCCCCTTTGGC...AAGTCTCGGCCTCCACATTAACCATAGGATGTTGACTCTAGAACCTGGACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp AAAAAGGTTAAAATCACGCTCGGAGACCTGCACTTATTCGCTGCAGACGGCCATCTCACGAACTGGTCCTaGAGGAAAGAGCCGGCCATG +
Preference number: 4 (lower is better)
Translates to: KKVKITLGDLHLFAADGHLTNWS*RKEPAM
Trigger: CATGGCCGGCTCTTTCCTGCAGGACCAGTTCGTGAG...ATGGCCGTCTGCAGCGAATAAGTGCAGGTCTCCGAGCGTGATTTTAACCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp AAGGTGTTTGGGTGGATTCTCCTTAGCTATTTGTGTGCATTAGGGCACATAGTATGGCACTGGGAGCAGTaGCCGCAGACTGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: KVFGWILLSYLCALGHIVWHWEQ*PQTVAG
Trigger: GCCAGCCACAGTCTGCGGCCACTGCTCCCAGTGCCA...TACTATGTGCCCTAATGCACACAAATAGCTAAGGAGAATCCACCCAAACACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp TTTGTTCCACTAAAATTATTAACATCCCTACCATCCATCCATCCATCCATCCACAGGGGTAGCCGGCCGTaGGGTATCCCTGCGGCGAGG +
Preference number: 4 (lower is better)
Translates to: FVPLKLLTSLPSIHPSIHRGSRP*GIPAAR
Trigger: CCTCGCCGCAGGGATACCCCACGGCCGGCTACCCCT...GTGGATGGATGGATGGATGGATGGTAGGGATGTTAATAATTTTAGTGGAACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp AAAGACGAGGGGGAGGGGAATTGTAGGAGGATAACTCCACAGAAGAAGAGTAAGGCGTCTCGATCCAGCTaGAATCGGACAGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: KDEGEGNCRRITPQKKSKASRSS*NRTGPW
Trigger: CCAAGGACCTGTCCGATTCCAGCTGGATCGAGACGC...CTTACTCTTCTTCTGTGGAGTTATCCTCCTACAATTCCCCTCCCCCTCGTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp ACTGAAAGATATTCAGAAACAGTTTGTCAGCATATTTGGCACCTGCACAGACCAGCCGTGGGGTATCCCTaGGGCGAGGAGTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: TERYSETVCQHIWHLHRPAVGYP*GEELDR
Trigger: CCTGTCCAACTCCTCGCCGCAGGGATACCCCACGGC...TGGTCTGTGCAGGTGCCAAATATGCTGACAAACTGTTTCTGAATATCTTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp ACTGAAAGATATTCAGAAACAGTTTGTCAGCATATTTGGCACCTGCACAGACCAAGCAGCCCGTTGGTGTaGGGCACGCTGCGGTCCGTA +
Preference number: 4 (lower is better)
Translates to: TERYSETVCQHIWHLHRPSSPLV*GTLRSV
Trigger: TACGGACCGCAGCGTGCCGCACACCAACGGGCTGCT...TGGTCTGTGCAGGTGCCAAATATGCTGACAAACTGTTTCTGAATATCTTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp TTTGGGTGGATTCTCCTTAGCTATTTGTGTGCATTAGGGCACATAGTAATTATTGGGTCCTCGGCCTGCTaGGGCGACAGCAGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: FGWILLSYLCALGHIVIIGSSAC*GDSSPL
Trigger: CAACGGGCTGCTGTCGCCGCAGCAGGCCGAGGACCC...AATAATTACTATGTGCCCTAATGCACACAAATAGCTAAGGAGAATCCACCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp TTTACAGCATATAAAGGTGAAGGGGTACTGAAAGATATTCAGAAACAGTTTGTCGCAGCGTGGCCGCGTTaGCCGCGAAGTCCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: FTAYKGEGVLKDIQKQFVAAWPR*PRSPWP
Trigger: CGGCCACGGACTTCGCGGGCAACGCGGCCACGCTGC...GACAAACTGTTTCTGAATATCTTTCAGTACCCCTTCACCTTTATATGCTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR TCA 90 bp AGTTTGTCAGCATATTTGGCACCTGCACAGACCAGTAATGGATTTGGCACTTTGCATAGCTCTAGAACCTaGACACTCGCCCTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: SLSAYLAPAQTSNGFGTLHSSRT*TLALPS
Trigger: GGACGGGAGGGCGAGTGTTCAGGTTCTAGAGCTATG...CAAAGTGCCAAATCCATTACTGGTCTGTGCAGGTGCCAAATATGCTGACAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR TCA 90 bp AGTTTGTCAGCATATTTGGCACCTGCACAGACCAGTAATGGATTTGGCACTTTGAAGCTCGGATCCGCCTaGATGTGGGTAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLSAYLAPAQTSNGFGTLKLGSA*MWVAAA
Trigger: AGCAGCAGCTACCCACATTCAGGCGGATCCGAGCTT...CAAAGTGCCAAATCCATTACTGGTCTGTGCAGGTGCCAAATATGCTGACAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR TCA 90 bp GTGGGTCCAGGTTCTAGAGTCAACATCCTATGGTTAATGTGGAGGCCGAGACTTGAGGGTCAAATAAAATaGGTGGGTGCGCAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: VGPGSRVNILWLMWRPRLEGQIK*VGAQGG
Trigger: TCCTCCTTGCGCACCCACTCATTTTATTTGACCCTC...AAGTCTCGGCCTCCACATTAACCATAGGATGTTGACTCTAGAACCTGGACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp AGAAGAAGAGTAAGTAGGAAAACCAAAAGGTTTACAGCAAAGTTGAAGGTCGGTGGTACACCTGTGCTTTaGCGGGCACCAGCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: RRRVSRKTKRFTAKLKVGGTPVL*RAPAPA
Trigger: AGCCGGGGCTGGTGCCCGGCAAAGCACAGGTGTACC...ACCGACCTTCAACTTTGCTGTAAACCTTTTGGTTTTCCTACTTACTCTTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp GTGGGTCCAGGTTCTAGAGTCAACATCCTATGGTTAATGTGGAGGCCGAGACTTCGCAAGGAACCCATTTaGCTCCTTGAAACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: VGPGSRVNILWLMWRPRLRKEPI*LLETSS
Trigger: ACTGGAGGTTTCAAGGAGGCAAATGGGTTCCTTGCG...AAGTCTCGGCCTCCACATTAACCATAGGATGTTGACTCTAGAACCTGGACCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp AAAGACGAGGGGGAGGGGAATTGTAGGAGGATAACTCCACAGAAGAAGAGTAAGCGGGGCTGGTACTTGTaGAAGGACTGTAAAACCACC +
Preference number: 4 (lower is better)
Translates to: KDEGEGNCRRITPQKKSKRGWYL*KDCKTT
Trigger: GGTGGTTTTACAGTCCTTGCACAAGTACCAGCCCCG...CTTACTCTTCTTCTGTGGAGTTATCCTCCTACAATTCCCCTCCCCCTCGTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp TTTGGGTGGATTCTCCTTAGCTATTTGTGTGCATTAGGGCACATAGTAATTATTGTGCAGCCTGCAGCCTaGAGCGGCAGCGCCTTCACG +
Preference number: 4 (lower is better)
Translates to: FGWILLSYLCALGHIVIIVQPAA*SGSAFT
Trigger: CGTGAAGGCGCTGCCGCTGCAGGCTGCAGGCTGCAC...AATAATTACTATGTGCCCTAATGCACACAAATAGCTAAGGAGAATCCACCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp GTGGGTCCAGGTTCTAGAGTCAACATCCTATGGTTAATGTGGAGGCCGAGACTTAATAAAATGAGTGGGTaGGCAAGGAGGAGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: VGPGSRVNILWLMWRPRLNKMSG*ARRSVG
Trigger: CCCCACACTCCTCCTTGCGCACCCACTCATTTTATT...AAGTCTCGGCCTCCACATTAACCATAGGATGTTGACTCTAGAACCTGGACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp CACTTAATCGACTTGCCTATGAACAGACACCTATCCTTTAAAGGTGTTTGGGTGACGGGAACATGGCACTaGGAGCAGTGGCCGCAGACT +
Preference number: 4 (lower is better)
Translates to: HLIDLPMNRHLSFKGVWVTGTWH*EQWPQT
Trigger: AGTCTGCGGCCACTGCTCCCAGTGCCATGTTCCCGT...CACCCAAACACCTTTAAAGGATAGGTGTCTGTTCATAGGCAAGTCGATTAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp CACTTAATCGACTTGCCTATGAACAGACACCTATCCTTTAAAGGTGTTTGGGTGCCTGCGGCGAGGAGTTaGACAGGAGGCTGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: HLIDLPMNRHLSFKGVWVPAARS*TGGCCR
Trigger: CCTACAACAGCCTCCTGTCCAACTCCTCGCCGCAGG...CACCCAAACACCTTTAAAGGATAGGTGTCTGTTCATAGGCAAGTCGATTAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp TTTGGGTGGATTCTCCTTAGCTATTTGTGTGCATTAGGGCACATAGTAATTATTGCGACAGCAGCCCGTTaGTGTGCGGCACGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: FGWILLSYLCALGHIVIIATAAR*CAARCG
Trigger: ACCGCAGCGTGCCGCACACCAACGGGCTGCTGTCGC...AATAATTACTATGTGCCCTAATGCACACAAATAGCTAAGGAGAATCCACCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp TTTGGGTGGATTCTCCTTAGCTATTTGTGTGCATTAGGGCACATAGTAATTATTGTGGGGAGGCGGAGCTaGGGAAGAGCTGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: FGWILLSYLCALGHIVIIVGRRS*GRAVRG
Trigger: GCCCCTCACAGCTCTTCCCCAGCTCCGCCTCCCCAC...AATAATTACTATGTGCCCTAATGCACACAAATAGCTAAGGAGAATCCACCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR TCA 90 bp AAAGACGAGGGGGAGGGGAATTGTAGGAGGATAACTCCACAGAAGAAGAGTAAGGTCGAGATAATGGGATaGTCGTGCAAGACAAGCTCG +
Preference number: 4 (lower is better)
Translates to: KDEGEGNCRRITPQKKSKVEIMG*SCKTSS
Trigger: CGAGCTTGTCTTGCACGATCATCCCATTATCTCGAC...CTTACTCTTCTTCTGTGGAGTTATCCTCCTACAATTCCCCTCCCCCTCGTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp TTTGCAGGCATCATGCCACTTAATCGACTTGCCTATGAACAGACACCTATCCTTTTCACTTCCACCACATaGAGGCGGGGCTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: FAGIMPLNRLAYEQTPILFTSTT*RRGWYL
Trigger: CAAGTACCAGCCCCGCCTGCATGTGGTGGAAGTGAA...AAGGATAGGTGTCTGTTCATAGGCAAGTCGATTAAGTGGCATGATGCCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp AAAAAGGTTAAAATCACGCTCGGAGACCTGCACTTATTCGCTGCAGACGGCCATCCCCTGGTGAGTCCTTaGAGTCAGGAAAATTGTCTG +
Preference number: 4 (lower is better)
Translates to: KKVKITLGDLHLFAADGHPLVSP*SQENCL
Trigger: CAGACAATTTTCCTGACTCCAAGGACTCACCAGGGG...ATGGCCGTCTGCAGCGAATAAGTGCAGGTCTCCGAGCGTGATTTTAACCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp AAAGACGAGGGGGAGGGGAATTGTAGGAGGATAACTCCACAGAAGAAGAGTAAGGATTTCCTTGCACATTaGTGTCCGCTTTGCCGCAAG +
Preference number: 4 (lower is better)
Translates to: KDEGEGNCRRITPQKKSKDFLAH*CPLCRK
Trigger: CTTGCGGCAAAGCGGACACCAATGTGCAAGGAAATC...CTTACTCTTCTTCTGTGGAGTTATCCTCCTACAATTCCCCTCCCCCTCGTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp AGTTTGTCAGCATATTTGGCACCTGCACAGACCAGTAATGGATTTGGCACTTTGACATGCAGGCGGGGCTaGTACTTGTGCAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: SLSAYLAPAQTSNGFGTLTCRRG*YLCKDC
Trigger: ACAGTCCTTGCACAAGTACCAGCCCCGCCTGCATGT...CAAAGTGCCAAATCCATTACTGGTCTGTGCAGGTGCCAAATATGCTGACAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp TTTGGGTGGATTCTCCTTAGCTATTTGTGTGCATTAGGGCACATAGTAATTATTTGCCCGCGAAGTCCGTaGCCGTGTCATAGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: FGWILLSYLCALGHIVIICPRSP*PCHRPR
Trigger: CCTCGGCCTATGACACGGCCACGGACTTCGCGGGCA...AATAATTACTATGTGCCCTAATGCACACAAATAGCTAAGGAGAATCCACCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp AGAAGAAGAGTAAGTAGGAAAACCAAAAGGTTTACAGCAAAGTTGAAGGTCGGTCGTAAGAGAGCAGCGTaGCCGCGTTGCCCGCGAAGT +
Preference number: 4 (lower is better)
Translates to: RRRVSRKTKRFTAKLKVGRKRAA*PRCPRS
Trigger: ACTTCGCGGGCAACGCGGCCACGCTGCTCTCTTACG...ACCGACCTTCAACTTTGCTGTAAACCTTTTGGTTTTCCTACTTACTCTTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp TTTGGGTGGATTCTCCTTAGCTATTTGTGTGCATTAGGGCACATAGTAATTATTGCGCAAGGAGGAGTGTaGGGAGGCGGAGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: FGWILLSYLCALGHIVIIAQGGV*GGGAGE
Trigger: TTCCCCAGCTCCGCCTCCCCACACTCCTCCTTGCGC...AATAATTACTATGTGCCCTAATGCACACAAATAGCTAAGGAGAATCCACCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR TCA 90 bp AAGGTGTTTGGGTGGATTCTCCTTAGCTATTTGTGTGCATTAGGGCACATAGTATCCGTTTGGTGCCGGTaGAATTTCAGCCAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: KVFGWILLSYLCALGHIVSVWCR*NFSQRG
Trigger: GCCCCTTTGGCTGAAATTTCACCGGCACCAAACGGA...TACTATGTGCCCTAATGCACACAAATAGCTAAGGAGAATCCACCCAAACACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR TCA 90 bp AAAGACGAGGGGGAGGGGAATTGTAGGAGGATAACTCCACAGAAGAAGAGTAAGAGCTGCTGCTCACATTaGGAAATTTCTTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: KDEGEGNCRRITPQKKSKSCCSH*EISWRA
Trigger: TGCTCTCCAAGAAATTTCTCAATGTGAGCAGCAGCT...CTTACTCTTCTTCTGTGGAGTTATCCTCCTACAATTCCCCTCCCCCTCGTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR TCA 90 bp TTTGTTCCACTAAAATTATTAACATCCCTACCATCCATCCATCCATCCATCCACCTGGACGTCCCCTGGTaGGTCCTTGGAGTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: FVPLKLLTSLPSIHPSIHLDVPW*VLGVRK
Trigger: TTTCCTGACTCCAAGGACTCACCAGGGGACGTCCAG...GTGGATGGATGGATGGATGGATGGTAGGGATGTTAATAATTTTAGTGGAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp TTTGCAGGCATCATGCCACTTAATCGACTTGCCTATGAACAGACACCTATCCTTGAAGGAGAAAGGCAGTaGTCCAGCTGCATAGCTCTA +
Preference number: 4 (lower is better)
Translates to: FAGIMPLNRLAYEQTPILEGERQ*SSCIAL
Trigger: TAGAGCTATGCAGCTGGAGCACTGCCTTTCTCCTTC...AAGGATAGGTGTCTGTTCATAGGCAAGTCGATTAAGTGGCATGATGCCTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp TTTGGGTGGATTCTCCTTAGCTATTTGTGTGCATTAGGGCACATAGTAATTATTAGATCCGCCTCCGCTTaGCCTGCTCGTAAATCCCCG +
Preference number: 4 (lower is better)
Translates to: FGWILLSYLCALGHIVIIRSASA*PARKSP
Trigger: CGGGGATTTACGAGCAGGCCAAGCGGAGGCGGATCT...AATAATTACTATGTGCCCTAATGCACACAAATAGCTAAGGAGAATCCACCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR TCA 90 bp AGTTTGTCAGCATATTTGGCACCTGCACAGACCAGTAATGGATTTGGCACTTTGTTGTCTGTATCTGACTaGTTCGTCATCCCCCTGGTA +
Preference number: 4 (lower is better)
Translates to: SLSAYLAPAQTSNGFGTLLSVSD*FVIPLV
Trigger: TACCAGGGGGATGACGAATCAGTCAGATACAGACAA...CAAAGTGCCAAATCCATTACTGGTCTGTGCAGGTGCCAAATATGCTGACAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR TCA 90 bp AAAAAGGTTAAAATCACGCTCGGAGACCTGCACTTATTCGCTGCAGACGGCCATAAAATTGTCTGTATCTaGCTGATTCGTCATCCCCCT +
Preference number: 4 (lower is better)
Translates to: KKVKITLGDLHLFAADGHKIVCI*LIRHPP
Trigger: AGGGGGATGACGAATCAGTCAGATACAGACAATTTT...ATGGCCGTCTGCAGCGAATAAGTGCAGGTCTCCGAGCGTGATTTTAACCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp ACTGAAAGATATTCAGAAACAGTTTGTCAGCATATTTGGCACCTGCACAGACCAGAGAGTTTACTTCTCTaGACGTCCCCTGGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: TERYSETVCQHIWHLHRPESLLL*TSPGES
Trigger: GGACTCACCAGGGGACGTCCAGAGAAGTAAACTCTC...TGGTCTGTGCAGGTGCCAAATATGCTGACAAACTGTTTCTGAATATCTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp ACTGAAAGATATTCAGAAACAGTTTGTCAGCATATTTGGCACCTGCACAGACCAAGTGAGCCCCAGTGTTaGGGGAATCCGGATGCATAT +
Preference number: 4 (lower is better)
Translates to: TERYSETVCQHIWHLHRPSEPQC*GNPDAY
Trigger: ATATGCATCCGGATTCCCCCAACACTGGGGCTCACT...TGGTCTGTGCAGGTGCCAAATATGCTGACAAACTGTTTCTGAATATCTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp AAAAAGGTTAAAATCACGCTCGGAGACCTGCACTTATTCGCTGCAGACGGCCATTCAGCTGTTTCTAGGTaGTGGGGAAGTCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: KKVKITLGDLHLFAADGHSAVSR*WGSHFQ
Trigger: TTGAAAATGACTTCCCCACCACCTAGAAACAGCTGA...ATGGCCGTCTGCAGCGAATAAGTGCAGGTCTCCGAGCGTGATTTTAACCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR TCA 90 bp AAAGACGAGGGGGAGGGGAATTGTAGGAGGATAACTCCACAGAAGAAGAGTAAGAAGGTGAAGGGGTACTaGAAGATATTCAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: KDEGEGNCRRITPQKKSKKVKGY*KIFRNS
Trigger: ACTGTTTCTGAATATCTTTCAGTACCCCTTCACCTT...CTTACTCTTCTTCTGTGGAGTTATCCTCCTACAATTCCCCTCCCCCTCGTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp TTTACAGCATATAAAGGTGAAGGGGTACTGAAAGATATTCAGAAACAGTTTGTCGGTGGAAGCGGGCCTTaGCGTAGTTGCTCACGAACT +
Preference number: 4 (lower is better)
Translates to: FTAYKGEGVLKDIQKQFVGGSGP*RSCSRT
Trigger: AGTTCGTGAGCAACTACGCCAAGGCCCGCTTCCACC...GACAAACTGTTTCTGAATATCTTTCAGTACCCCTTCACCTTTATATGCTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp AAAAAGGTTAAAATCACGCTCGGAGACCTGCACTTATTCGCTGCAGACGGCCATATTCTATTTAGAAGGTaGGGGGAACATACAACTCCA +
Preference number: 4 (lower is better)
Translates to: KKVKITLGDLHLFAADGHILFRR*GEHTTP
Trigger: TGGAGTTGTATGTTCCCCCCACCTTCTAAATAGAAT...ATGGCCGTCTGCAGCGAATAAGTGCAGGTCTCCGAGCGTGATTTTAACCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR TCA 90 bp AGTTTGTCAGCATATTTGGCACCTGCACAGACCAGTAATGGATTTGGCACTTTGCTGCCCATTGTTATTTaGAGCTCCTTTGTTGTTCGT +
Preference number: 4 (lower is better)
Translates to: SLSAYLAPAQTSNGFGTLLPIVI*SSFVVR
Trigger: ACGAACAACAAAGGAGCTTCAAATAACAATGGGCAG...CAAAGTGCCAAATCCATTACTGGTCTGTGCAGGTGCCAAATATGCTGACAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp TTTGGGTGGATTCTCCTTAGCTATTTGTGTGCATTAGGGCACATAGTAATTATTCATTGGTGTCCGCTTTaGCGCAAGGAACCCATTTGC +
Preference number: 4 (lower is better)
Translates to: FGWILLSYLCALGHIVIIHWCPL*RKEPIC
Trigger: GCAAATGGGTTCCTTGCGGCAAAGCGGACACCAATG...AATAATTACTATGTGCCCTAATGCACACAAATAGCTAAGGAGAATCCACCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp AGTAGGAAAACCAAAAGGTTTACAGCAAAGTTGAAGGTCGGTGAGCTAATTGCAGCTTTGCAGGCATCATaGCACTTAATCGACTTGCCT +
Preference number: 4 (lower is better)
Translates to: SRKTKRFTAKLKVGELIAALQAS*HLIDLP
Trigger: AGGCAAGTCGATTAAGTGGCATGATGCCTGCAAAGC...TGCAATTAGCTCACCGACCTTCAACTTTGCTGTAAACCTTTTGGTTTTCCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR CAA 72 bp GACTTTGCTTTGCAGGCATCATGCCACTTAATCGACTaGCCTATGAACAGACACCTATCCTTTAAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: DFALQASCHLID*PMNRHLSFKGV
Trigger: AACACCTTTAAAGGATAGGTGTCTGTTCATAGGCAAGTCGATTAAGTGGCATGATGCCTGCAAAGCAAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp TTTACAGCATATAAAGGTGAAGGGGTACTGAAAGATATTCAGAAACAGTTTGTCGAGGAGGTAGCGATCTaGAGCAGAGCCATCGAAACT +
Preference number: 4 (lower is better)
Translates to: FTAYKGEGVLKDIQKQFVEEVAI*SRAIET
Trigger: AGTTTCGATGGCTCTGCTGCAGATCGCTACCTCCTC...GACAAACTGTTTCTGAATATCTTTCAGTACCCCTTCACCTTTATATGCTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp ACTGAAAGATATTCAGAAACAGTTTGTCAGCATATTTGGCACCTGCACAGACCATCGCCCTCCCGTCCCTaGTTTTTAAAGTCCTATTTA +
Preference number: 4 (lower is better)
Translates to: TERYSETVCQHIWHLHRPSPSRP*FLKSYL
Trigger: TAAATAGGACTTTAAAAACCAGGGACGGGAGGGCGA...TGGTCTGTGCAGGTGCCAAATATGCTGACAAACTGTTTCTGAATATCTTTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp ACTGAAAGATATTCAGAAACAGTTTGTCAGCATATTTGGCACCTGCACAGACCAGTTTGTCAGCATATTTaGCACCTGCACAGACCAGTA +
Preference number: 4 (lower is better)
Translates to: TERYSETVCQHIWHLHRPVCQHI*HLHRPV
Trigger: TACTGGTCTGTGCAGGTGCCAAATATGCTGACAAAC...TGGTCTGTGCAGGTGCCAAATATGCTGACAAACTGTTTCTGAATATCTTTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR CAA 72 bp GCATTAGGGCACATAGTAATTATTTCATGCAACGGATaGAGGAGAAGTGGGAAACCCATCACTACTGAGTAT +
Preference number: 4 (lower is better)
Translates to: ALGHIVIISCNG*RRSGKPITTEY
Trigger: ATACTCAGTAGTGATGGGTTTCCCACTTCTCCTCAATCCGTTGCATGAAATAATTACTATGTGCCCTAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR TCA 90 bp TTTGGGTGGATTCTCCTTAGCTATTTGTGTGCATTAGGGCACATAGTAATTATTTTTCATGCAACGGATTaGGGAGAAGTGGGAAACCCA +
Preference number: 4 (lower is better)
Translates to: FGWILLSYLCALGHIVIIFHATD*GEVGNP
Trigger: TGGGTTTCCCACTTCTCCTCAATCCGTTGCATGAAA...AATAATTACTATGTGCCCTAATGCACACAAATAGCTAAGGAGAATCCACCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp AGTAGGAAAACCAAAAGGTTTACAGCAAAGTTGAAGGTCGGTGAGCTAATTGCATATTGTAATGAGCCGTaGGATCGAGACCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: SRKTKRFTAKLKVGELIAYCNEP*DRDQKC
Trigger: ACATTTCTGGTCTCGATCCCACGGCTCATTACAATA...TGCAATTAGCTCACCGACCTTCAACTTTGCTGTAAACCTTTTGGTTTTCCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp TTTGTTCCACTAAAATTATTAACATCCCTACCATCCATCCATCCATCCATCCACGAAACCTCCAGTGATTaGGATCCGCCAAAATCACAT +
Preference number: 4 (lower is better)
Translates to: FVPLKLLTSLPSIHPSIHETSSD*DPPKSH
Trigger: ATGTGATTTTGGCGGATCCCAATCACTGGAGGTTTC...GTGGATGGATGGATGGATGGATGGTAGGGATGTTAATAATTTTAGTGGAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp ACTGAAAGATATTCAGAAACAGTTTGTCAGCATATTTGGCACCTGCACAGACCATGTAAAACCACCATCTaGCCATTGTTATTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: TERYSETVCQHIWHLHRPCKTTI*PLLFEA
Trigger: AGCTTCAAATAACAATGGGCAGATGGTGGTTTTACA...TGGTCTGTGCAGGTGCCAAATATGCTGACAAACTGTTTCTGAATATCTTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp TTTGGGTGGATTCTCCTTAGCTATTTGTGTGCATTAGGGCACATAGTAATTATTAGGTTAAGCATGAACTaGTTTTGTGCCTTGACGAGA +
Preference number: 4 (lower is better)
Translates to: FGWILLSYLCALGHIVIIRLSMN*FCALTR
Trigger: TCTCGTCAAGGCACAAAACCAGTTCATGCTTAACCT...AATAATTACTATGTGCCCTAATGCACACAAATAGCTAAGGAGAATCCACCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
3UTR CAA 72 bp CCTTTAAAGGTGTTTGGGTGGATTCTCCTTAGCTATTaGTGTGCATTAGGGCACATAGTAATTATTTCATGC +
Preference number: 4 (lower is better)
Translates to: PLKVFGWILLSY*CALGHIVIISC
Trigger: GCATGAAATAATTACTATGTGCCCTAATGCACACAAATAGCTAAGGAGAATCCACCCAAACACCTTTAAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR TCA 90 bp TTTGTTCCACTAAAATTATTAACATCCCTACCATCCATCCATCCATCCATCCACCACACGTTTAGACCCTaGATTCCTATTAGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: FVPLKLLTSLPSIHPSIHHTFRP*IPIRKN
Trigger: ATTTTTCCTAATAGGAATTCAGGGTCTAAACGTGTG...GTGGATGGATGGATGGATGGATGGTAGGGATGTTAATAATTTTAGTGGAACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR GCA 90 bp TTTGTTCCACTAAAATTATTAACATCCCTACCATCCATCCATCCATCCATCCACCATGAACTGGTTTTGTaGCTTGACGAGAATAAAAAC +
Preference number: 4 (lower is better)
Translates to: FVPLKLLTSLPSIHPSIHHELVL*LDENKN
Trigger: GTTTTTATTCTCGTCAAGGCACAAAACCAGTTCATG...GTGGATGGATGGATGGATGGATGGTAGGGATGTTAATAATTTTAGTGGAACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CCA 90 bp AGAAGAAGAGTAAGTAGGAAAACCAAAAGGTTTACAGCAAAGTTGAAGGTCGGTTTAAAGGTGTTTGGGTaGATTCTCCTTAGCTATTTG +
Preference number: 4 (lower is better)
Translates to: RRRVSRKTKRFTAKLKVGLKVFG*ILLSYL
Trigger: CAAATAGCTAAGGAGAATCCACCCAAACACCTTTAA...ACCGACCTTCAACTTTGCTGTAAACCTTTTGGTTTTCCTACTTACTCTTCTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS GCA 90 bp CGCCCCAGCCCGACGGGTCGGCGTAGTAGCCGAGCGGGCGGCCAGTaGAGCCTGCAGCCTGCAGCGGCAGCGCCTTCACGCCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: RPSPTGRRSSRAGGQ*SLQPAAAAPSRPPP
Trigger: CGGCGGCGGGCGTGAAGGCGCTGCCGCTGCAGGCTGCAGGCTGCACTGGCCGCCCGCTCGGCTACTACGCCGACCCGTCGGGCTGGGGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000463544.1
CDS GCA 90 bp GGCGTGTTAACGCGGTCGCTGTGCGCGTGGCTGTGTGCGCCCGGCTaGGCGCCCGGGCCGGCGGAGGCAGCCTGCAGCCCGCCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: GVLTRSLCAWLCAPG*APGPAEAACSPPSR
Trigger: CCTGGAAGGCGGGCTGCAGGCTGCCTCCGCCGGCCCGGGCGCGCAGCCGGGCGCACACAGCCACGCGCACAGCGACCGCGTTAACACGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CCA 90 bp CGGCCGCGGCGCTGTTGGGCCAGCAGGGCAGCACCGAGCCCGACTTaGTGCCGCAGTACTGCGGGGGACTGCGGGCGCCCCAGCCCGACG +
Preference number: 5 (lower is better)
Translates to: RPRRCWASRAAPSPT*CRSTAGDCGRPSPT
Trigger: CGTCGGGCTGGGGCGCCCGCAGTCCCCCGCAGTACTGCGGCACCAAGTCGGGCTCGGTGCTGCCCTGCTGGCCCAACAGCGCCGCGGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000410035.1
CDS CCA 90 bp GAAAGGGGAGCGCCGGGTGGCGTGTTAACGCGGTCGCTGTGCGCGTaGCTGTGTGCGCCCGGCTGCGCGCCCGGGCCGGCGGAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: ERGAPGGVLTRSLCA*LCAPGCAPGPAEAA
Trigger: GGCTGCCTCCGCCGGCCCGGGCGCGCAGCCGGGCGCACACAGCCACGCGCACAGCGACCGCGTTAACACGCCACCCGGCGCTCCCCTTTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS GCA 90 bp CCGCGGCGCTGTTGGGCCAGCAGGGCAGCACCGAGCCCGACTTGGTaGCGCAGTACTGCGGGGGACTGCGGGCGCCCCAGCCCGACGGGT +
Preference number: 5 (lower is better)
Translates to: PRRCWASRAAPSPTW*RSTAGDCGRPSPTG
Trigger: ACCCGTCGGGCTGGGGCGCCCGCAGTCCCCCGCAGTACTGCGGCACCAAGTCGGGCTCGGTGCTGCCCTGCTGGCCCAACAGCGCCGCGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000410035.1
CDS GCA 90 bp CGGGAAGAAAGGGGAGCGCCGGGTGGCGTGTTAACGCGGTCGCTGTaGGCGTGGCTGTGTGCGCCCGGCTGCGCGCCCGGGCCGGCGGAG +
Preference number: 5 (lower is better)
Translates to: REERGAPGGVLTRSL*AWLCAPGCAPGPAE
Trigger: CTCCGCCGGCCCGGGCGCGCAGCCGGGCGCACACAGCCACGCGCACAGCGACCGCGTTAACACGCCACCCGGCGCTCCCCTTTCTTCCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CCA 90 bp GGTAGGGATTGGCGCCGGCCATGCGCGCGGCGGCCGCGGCGCTGTTaGGCCAGCAGGGCAGCACCGAGCCCGACTTGGTGCCGCAGTACT +
Preference number: 5 (lower is better)
Translates to: GRDWRRPCARRPRRC*ASRAAPSPTWCRST
Trigger: AGTACTGCGGCACCAAGTCGGGCTCGGTGCTGCCCTGCTGGCCCAACAGCGCCGCGGCCGCCGCGCGCATGGCCGGCGCCAATCCCTACC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000410035.1
CDS GCA 90 bp ACAAACCAGCGTTGCGGCGAGGGCGCGCCCGGGTCCTCGGCCTGCTaGGGCGACAGCAGCCCGTTGGTGTGCGGCACGCTGCGGTCCGTA +
Preference number: 5 (lower is better)
Translates to: TNQRCGEGAPGSSAC*GDSSPLVCGTLRSV
Trigger: TACGGACCGCAGCGTGCCGCACACCAACGGGCTGCTGTCGCCGCAGCAGGCCGAGGACCCGGGCGCGCCCTCGCCGCAACGCTGGTTTGT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000463544.1
ENST00000477804.5
CDS CCA 90 bp GCAGCGGCAGCGCCTTCACGCCCGCCGCCGCGTAAGAGAGCAGCGTaGCCGCGTTGCCCGCGAAGTCCGTGGCCGTGTCATAGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: AAAAPSRPPPRKRAA*PRCPRSPWPCHRPR
Trigger: CCTCGGCCTATGACACGGCCACGGACTTCGCGGGCAACGCGGCCACGCTGCTCTCTTACGCGGCGGCGGGCGTGAAGGCGCTGCCGCTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000411412.5
ENST00000463544.1
CDS GCA 90 bp CGGGGCCCGCGCCCGCGCCCGGGTGGAAGCGGGCCTTGGCGTAGTTaGTCACGAACTGGTCCTGCAGGAAAGAGCCGGCCATGGCGTAGC +
Preference number: 5 (lower is better)
Translates to: RGPRPRPGGSGPWRS*SRTGPAGKSRPWRS
Trigger: GCTACGCCATGGCCGGCTCTTTCCTGCAGGACCAGTTCGTGAGCAACTACGCCAAGGCCCGCTTCCACCCGGGCGCGGGCGCGGGCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000463544.1
ENST00000477804.5
CDS GCA 90 bp GCGCCTTCACGCCCGCCGCCGCGTAAGAGAGCAGCGTGGCCGCGTTaGCCGCGAAGTCCGTGGCCGTGTCATAGGCCGAGGCCGCGAAGT +
Preference number: 5 (lower is better)
Translates to: APSRPPPRKRAAWPR*PRSPWPCHRPRPRS
Trigger: ACTTCGCGGCCTCGGCCTATGACACGGCCACGGACTTCGCGGGCAACGCGGCCACGCTGCTCTCTTACGCGGCGGCGGGCGTGAAGGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000411412.5
ENST00000463544.1
CDS GCA 90 bp GCCGCGAAGTCCAGCCGGTTGTTGGCCGGCGTCACAAACCAGCGTTaGGGCGAGGGCGCGCCCGGGTCCTCGGCCTGGAACTGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: AAKSSRLLAGVTNQR*GEGAPGSSAWNWSC
Trigger: GCAGGACCAGTTCCAGGCCGAGGACCCGGGCGCGCCCTCGCCGCAACGCTGGTTTGTGACGCCGGCCAACAACCGGCTGGACTTCGCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411412.5
CDS CCA 90 bp CGGCTAGGGCTGCCGATGGAGAAGGCGGGGTGCGCCGGTCCGTGCTaGCCGGGGTACGGGAACATGGCACTGGGAGCAGTGGCCGCAGAC +
Preference number: 5 (lower is better)
Translates to: RLGLPMEKAGCAGPC*PGYGNMALGAVAAD
Trigger: GTCTGCGGCCACTGCTCCCAGTGCCATGTTCCCGTACCCCGGCCAGCACGGACCGGCGCACCCCGCCTTCTCCATCGGCAGCCCTAGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS CCA 90 bp CCGTGGCCGTGTCATAGGCCGAGGCCGCGAAGTCCAGCCGGTTGTTaGCCGGCGTCACAAACCAGCGTTGCGGCGAGGGCGCGCCCGGGT +
Preference number: 5 (lower is better)
Translates to: PWPCHRPRPRSPAGC*PASQTSVAARARPG
Trigger: ACCCGGGCGCGCCCTCGCCGCAACGCTGGTTTGTGACGCCGGCCAACAACCGGCTGGACTTCGCGGCCTCGGCCTATGACACGGCCACGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000411412.5
ENST00000463544.1
CDS CCA 90 bp CCGGGTCCTCGGCCTGGAACTGGTCCTGCAGGAAAGAGCCGGCCATaGCGTAGCGGGCCCCGGGCACGATCTGCGAGCGCGGCGAGTCGT +
Preference number: 5 (lower is better)
Translates to: PGPRPGTGPAGKSRP*RSGPRARSASAASR
Trigger: ACGACTCGCCGCGCTCGCAGATCGTGCCCGGGGCCCGCTACGCCATGGCCGGCTCTTTCCTGCAGGACCAGTTCCAGGCCGAGGACCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411412.5
CDS CCA 90 bp TGGCGTAGCGGGCCCCGGGCACGATCTGCGAGCGCGGCGAGTCGTTaGGCGAGGGGGTCAGGCGGTCCATGTCACAGCCGGTGTAGATCG +
Preference number: 5 (lower is better)
Translates to: WRSGPRARSASAASR*ARGSGGPCHSRCRS
Trigger: CGATCTACACCGGCTGTGACATGGACCGCCTGACCCCCTCGCCCAACGACTCGCCGCGCTCGCAGATCGTGCCCGGGGCCCGCTACGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000411412.5
ENST00000477804.5
CDS CCA 90 bp TGGCGTAGCGGGCCCCGGGCACGATCTGCGAGCGCGGCGAGTCGTTaGGCGAGGGGGTCAGGCGGTCCATGTCACAGCCGGTGTAGATCC +
Preference number: 5 (lower is better)
Translates to: WRSGPRARSASAASR*ARGSGGPCHSRCRS
Trigger: GGATCTACACCGGCTGTGACATGGACCGCCTGACCCCCTCGCCCAACGACTCGCCGCGCTCGCAGATCGTGCCCGGGGCCCGCTACGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CCA 90 bp AGAAGGCGGGGTGCGCCGGTCCGTGCTGGCCGGGGTACGGGAACATaGCACTGGGAGCAGTGGCCGCAGACTGTGGCTGGCTGGACTGAG +
Preference number: 5 (lower is better)
Translates to: RRRGAPVRAGRGTGT*HWEQWPQTVAGWTE
Trigger: CTCAGTCCAGCCAGCCACAGTCTGCGGCCACTGCTCCCAGTGCCATGTTCCCGTACCCCGGCCAGCACGGACCGGCGCACCCCGCCTTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS CCA 90 bp CCGCCGCGTAAGAGAGCAGCGTGGCCGCGTTGCCCGCGAAGTCCGTaGCCGTGTCATAGGCCGAGGCCGCGAAGTCCAGCCGGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: PPRKRAAWPRCPRSP*PCHRPRPRSPAGCW
Trigger: CCAACAACCGGCTGGACTTCGCGGCCTCGGCCTATGACACGGCCACGGACTTCGCGGGCAACGCGGCCACGCTGCTCTCTTACGCGGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000411412.5
ENST00000463544.1
CDS CCA 90 bp CCGCCTTCCAGGCTAACTGACCGCGGGACTCGCCTGGCTGGCGGCTaGCTGGCTGGGGCAGACCGGCTTTCGCACCTCTGGGAGCGAAGA +
Preference number: 5 (lower is better)
Translates to: PPSRLTDRGTRLAGG*LAGADRLSHLWERR
Trigger: TCTTCGCTCCCAGAGGTGCGAAAGCCGGTCTGCCCCAGCCAGCCAGCCGCCAGCCAGGCGAGTCCCGCGGTCAGTTAGCCTGGAAGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS TCA 90 bp TGGCGCAGTTCTTCTCGCAGTCCCGCTGGGCCAGCACCTCGCTCTTaGGCGGGGACGAACTCTCGGACACGGGCGTGTCGGCCGGCGAGA +
Preference number: 5 (lower is better)
Translates to: WRSSSRSPAGPAPRS*AGTNSRTRACRPAR
Trigger: TCTCGCCGGCCGACACGCCCGTGTCCGAGAGTTCGTCCCCGCTCAAGAGCGAGGTGCTGGCCCAGCGGGACTGCGAGAAGAACTGCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000410035.1
CDS GCA 90 bp AACTCTAGGGCGCCTTCCACTCCGCTCCCGACCCCAAATCGTCGCTaGCGCGGCAGTCACAGCCTAGGTGCACTTGTCCCCGGCTGCGCC +
Preference number: 5 (lower is better)
Translates to: NSRAPSTPLPTPNRR*RGSHSLGALVPGCA
Trigger: GGCGCAGCCGGGGACAAGTGCACCTAGGCTGTGACTGCCGCGGCAGCGACGATTTGGGGTCGGGAGCGGAGTGGAAGGCGCCCTAGAGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS GCA 90 bp CCCAGGTGGAGAGCGAGGTTGGCGACCTGCGTCTCCACCTGTCCGTaGATGCCAGTGTTGATGCGTCCCTCCCATCGCCCAGCCGCTGGC +
Preference number: 5 (lower is better)
Translates to: PRWRARLATCVSTCP*MPVLMRPSHRPAAG
Trigger: GCCAGCGGCTGGGCGATGGGAGGGACGCATCAACACTGGCATGCACGGACAGGTGGAGACGCAGGTCGCCAACCTCGCTCTCCACCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CCA 90 bp TGGCGTAGTTGCTCACGAACTGGTCCTGCAGGAAAGAGCCGGCCATaGCGTAGCGGGCCCCGGGCACGATCTGCGAGCGCGGCGAGTCGT +
Preference number: 5 (lower is better)
Translates to: WRSCSRTGPAGKSRP*RSGPRARSASAASR
Trigger: ACGACTCGCCGCGCTCGCAGATCGTGCCCGGGGCCCGCTACGCCATGGCCGGCTCTTTCCTGCAGGACCAGTTCGTGAGCAACTACGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000463544.1
ENST00000477804.5
CDS TCA 90 bp CGAGGTTGGCGACCTGCGTCTCCACCTGTCCGTGCATGCCAGTGTTaGTGCGTCCCTCCCATCGCCCAGCCGCTGGCCAGGGCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: RGWRPASPPVRACQC*CVPPIAQPLARALP
Trigger: AGGAAGAGCCCTGGCCAGCGGCTGGGCGATGGGAGGGACGCATCAACACTGGCATGCACGGACAGGTGGAGACGCAGGTCGCCAACCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS GCA 90 bp AGCCTTGCATGGCGGGAGAATGTGAGAGGGTGGGAGAGATGTCTGTaGCGCCCGCCTCGCCCCCAGCCCCTAGGTCTCCTTACATCCGTG +
Preference number: 5 (lower is better)
Translates to: SLAWRENVRGWERCL*RPPRPQPLGLLTSV
Trigger: CACGGATGTAAGGAGACCTAGGGGCTGGGGGCGAGGCGGGCGGCACAGACATCTCTCCCACCCTCTCACATTCTCCCGCCATGCAAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CCA 90 bp CTTGGTAGGAGTGGCCGTACTGCTGTGGGTAGGGGTAGCCGGCCGTaGGGTATCCCTGCGGCGAGGAGTTGGACAGGAGGCTGTTGTAGG +
Preference number: 5 (lower is better)
Translates to: LGRSGRTAVGRGSRP*GIPAARSWTGGCCR
Trigger: CCTACAACAGCCTCCTGTCCAACTCCTCGCCGCAGGGATACCCCACGGCCGGCTACCCCTACCCACAGCAGTACGGCCACTCCTACCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS CCA 90 bp GAACTGGTAGAACGGAGCTCCTTGGTAGGAGTGGCCGTACTGCTGTaGGTAGGGGTAGCCGGCCGTGGGGTATCCCTGCGGCGAGGAGTT +
Preference number: 5 (lower is better)
Translates to: ELVERSSLVGVAVLL*VGVAGRGVSLRRGV
Trigger: AACTCCTCGCCGCAGGGATACCCCACGGCCGGCTACCCCTACCCACAGCAGTACGGCCACTCCTACCAAGGAGCTCCGTTCTACCAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS CCA 90 bp TGCACAGGTACACCTGTGCTTTGCCGGGCACCAGCCCCGGCTGGGTaGAGGAGAACTGGTAGAACGGAGCTCCTTGGTAGGAGTGGCCGT +
Preference number: 5 (lower is better)
Translates to: CTGTPVLCRAPAPAG*RRTGRTELLGRSGR
Trigger: ACGGCCACTCCTACCAAGGAGCTCCGTTCTACCAGTTCTCCTCCACCCAGCCGGGGCTGGTGCCCGGCAAAGCACAGGTGTACCTGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS GCA 90 bp AGGTGGCAGTTATCACTGCCCAGGTGGAGAGCGAGGTTGGCGACCTaGGTCTCCACCTGTCCGTGCATGCCAGTGTTGATGCGTCCCTCC +
Preference number: 5 (lower is better)
Translates to: RWQLSLPRWRARLAT*VSTCPCMPVLMRPS
Trigger: GGAGGGACGCATCAACACTGGCATGCACGGACAGGTGGAGACGCAGGTCGCCAACCTCGCTCTCCACCTGGGCAGTGATAACTGCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS GCA 90 bp TCATCTCCGTTTGGTGCCGGTGAAATTTCAGCCAAAGGGGCCTGTTaGACAGGTACACCTGTGCTTTGCCGGGCACCAGCCCCGGCTGGG +
Preference number: 5 (lower is better)
Translates to: SSPFGAGEISAKGAC*TGTPVLCRAPAPAG
Trigger: CCCAGCCGGGGCTGGTGCCCGGCAAAGCACAGGTGTACCTGTGCAACAGGCCCCTTTGGCTGAAATTTCACCGGCACCAAACGGAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS CCA 90 bp TCCGTGCATGCCAGTGTTGATGCGTCCCTCCCATCGCCCAGCCGCTaGCCAGGGCTCTTCCTTTTTCTTGCCTTCCTCTGGCCACTGACT +
Preference number: 5 (lower is better)
Translates to: SVHASVDASLPSPSR*PGLFLFLAFLWPLT
Trigger: AGTCAGTGGCCAGAGGAAGGCAAGAAAAAGGAAGAGCCCTGGCCAGCGGCTGGGCGATGGGAGGGACGCATCAACACTGGCATGCACGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS-3UTR CAA 90 bp CACTTATTCGCTGCAGACGGCCATCGAGGGTCAAATAAAATGAGTGGGTGCGCACGTCACAAACCAGCGTaGCGGCGAGGGCGCGCCCGG +
Preference number: 5 (lower is better)
Translates to: HLFAADGHRGSNKMSGCARHKPA*RRGRAR
Trigger: CCGGGCGCGCCCTCGCCGCAACGCTGGTTTGTGACG...TGCGCACCCACTCATTTTATTTGACCCTCGATGGCCGTCTGCAGCGAATAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS TCA 90 bp GCTTGGCCTGCTCGTAAATCCCCGAGTCGCTGGAGTCGATGGACTTaGTCGAGGAGGGCGTCTCGATCCAGCTGGAATCGGACAGGTCCT +
Preference number: 5 (lower is better)
Translates to: AWPARKSPSRWSRWT*SRRASRSSWNRTGP
Trigger: AGGACCTGTCCGATTCCAGCTGGATCGAGACGCCCTCCTCGATCAAGTCCATCGACTCCAGCGACTCGGGGATTTACGAGCAGGCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000410035.1
CDS CCA 90 bp TCCTCCGTGCCGTCCTCGTTCACTTCCACCACATGCAGGCGGGGCTaGTACTTGTGCAAGGACTGTAAAACCACCATCTGTCCGGCGGGA +
Preference number: 5 (lower is better)
Translates to: SSVPSSFTSTTCRRG*YLCKDCKTTICPAG
Trigger: TCCCGCCGGACAGATGGTGGTTTTACAGTCCTTGCACAAGTACCAGCCCCGCCTGCATGTGGTGGAAGTGAACGAGGACGGCACGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS-3UTR CAA 90 bp GTGGGTCCAGGTTCTAGAGTCAACATCCTATGGTTAATGTGGAGGCCGAGACTTAGCAGCGTGGCCGCGTaGCCCGCGAAGTCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: VGPGSRVNILWLMWRPRLSSVAA*PAKSVA
Trigger: GGCCACGGACTTCGCGGGCAACGCGGCCACGCTGCT...AAGTCTCGGCCTCCACATTAACCATAGGATGTTGACTCTAGAACCTGGACCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS CCA 90 bp AAAGAAGTGCAACCCAAATCAGGGAGAGCGGCGGGTGAGCTGGAGTaGGAAGGTGGCAGTTATCACTGCCCAGGTGGAGAGCGAGGTTGG +
Preference number: 5 (lower is better)
Translates to: KEVQPKSGRAAGELE*EGGSYHCPGGERGW
Trigger: CCAACCTCGCTCTCCACCTGGGCAGTGATAACTGCCACCTTCCCACTCCAGCTCACCCGCCGCTCTCCCTGATTTGGGTTGCACTTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CCA 90 bp GAAGAAAAGAAGTGCAACCCAAATCAGGGAGAGCGGCGGGTGAGCTaGAGTGGGAAGGTGGCAGTTATCACTGCCCAGGTGGAGAGCGAG +
Preference number: 5 (lower is better)
Translates to: EEKKCNPNQGERRVS*SGKVAVITAQVESE
Trigger: CTCGCTCTCCACCTGGGCAGTGATAACTGCCACCTTCCCACTCCAGCTCACCCGCCGCTCTCCCTGATTTGGGTTGCACTTCTTTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS TCA 90 bp TGGGAGAAGAAAAGAAGTGCAACCCAAATCAGGGAGAGCGGCGGGTaGGCTGGAGTGGGAAGGTGGCAGTTATCACTGCCCAGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: WEKKRSATQIRESGG*AGVGRWQLSLPRWR
Trigger: TCTCCACCTGGGCAGTGATAACTGCCACCTTCCCACTCCAGCTCACCCGCCGCTCTCCCTGATTTGGGTTGCACTTCTTTTCTTCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CCA 90 bp TCCTCCGTGCCGTCCTCGTTCACTTCCACCACATGCAGGCGGGGCTaGTACTTGTGCAAGGACTGTAAAACCACCATCTGCCCATTGTTA +
Preference number: 5 (lower is better)
Translates to: SSVPSSFTSTTCRRG*YLCKDCKTTICPLL
Trigger: TAACAATGGGCAGATGGTGGTTTTACAGTCCTTGCACAAGTACCAGCCCCGCCTGCATGTGGTGGAAGTGAACGAGGACGGCACGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000411412.5
CDS-3UTR CAA 90 bp AGTAGGAAAACCAAAAGGTTTACAGCAAAGTTGAAGGTCGGTGAGCTAATTGCAGAGCGCGGCGAGTCGTaGGGCGAGGGGGTCAGGCGG +
Preference number: 5 (lower is better)
Translates to: SRKTKRFTAKLKVGELIAERGES*GEGVRR
Trigger: CCGCCTGACCCCCTCGCCCAACGACTCGCCGCGCTC...TGCAATTAGCTCACCGACCTTCAACTTTGCTGTAAACCTTTTGGTTTTCCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CAA 90 bp ACTGAAAGATATTCAGAAACAGTTTGTCAGCATATTTGGCACCTGCACAGACCAGGCGACAGCAGCCCGTaGGTGTGCGGCACGCTGCGG +
Preference number: 5 (lower is better)
Translates to: TERYSETVCQHIWHLHRPGDSSP*VCGTLR
Trigger: CCGCAGCGTGCCGCACACCAACGGGCTGCTGTCGCC...TGGTCTGTGCAGGTGCCAAATATGCTGACAAACTGTTTCTGAATATCTTTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CAA 90 bp AAAAAGGTTAAAATCACGCTCGGAGACCTGCACTTATTCGCTGCAGACGGCCATAAGTCCAGCCGGTTGTaGGCCGGCGTCACAAACCAG +
Preference number: 5 (lower is better)
Translates to: KKVKITLGDLHLFAADGHKSSRL*AGVTNQ
Trigger: CTGGTTTGTGACGCCGGCCAACAACCGGCTGGACTT...ATGGCCGTCTGCAGCGAATAAGTGCAGGTCTCCGAGCGTGATTTTAACCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CAA 90 bp TTTGCAGGCATCATGCCACTTAATCGACTTGCCTATGAACAGACACCTATCCTTGAATCGGACAGGTCCTaGGGCTTGGCGTCCTCGGCG +
Preference number: 5 (lower is better)
Translates to: FAGIMPLNRLAYEQTPILESDRS*GLASSA
Trigger: CGCCGAGGACGCCAAGCCCAAGGACCTGTCCGATTC...AAGGATAGGTGTCTGTTCATAGGCAAGTCGATTAAGTGGCATGATGCCTGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS TCA 90 bp TTTAGGCAGAATTGCCCGTTTCAGACAGACATAGACAATCTGAGCTaGGCATCTGCAGCGCCACATACAGTACTCGCACCCGAGAACCAG +
Preference number: 5 (lower is better)
Translates to: FRQNCPFQTDIDNLS*ASAAPHTVLAPENQ
Trigger: CTGGTTCTCGGGTGCGAGTACTGTATGTGGCGCTGCAGATGCTCAGCTCAGATTGTCTATGTCTGTCTGAAACGGGCAATTCTGCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS TCA 90 bp ACTTCCCTCTTCTCTTGCTCTCTCTCGTCAAGTGTACTGGGGTACTaGGAGAGGGGCACAAGCAAGGACTTTCATCCCACTTCTCCAACA +
Preference number: 5 (lower is better)
Translates to: TSLFSCSLSSSVLGY*ERGTSKDFHPTSPT
Trigger: TGTTGGAGAAGTGGGATGAAAGTCCTTGCTTGTGCCCCTCTCTCAGTACCCCAGTACACTTGACGAGAGAGAGCAAGAGAAGAGGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS GCA 90 bp AATTTCTTGGAGAGCATGATAGAAGGAGAAAGGCAGTGCTCCAGCTaGATAGCTCTAGAACCTGAACACTCGCCCTCCCGTCCCTGGTTT +
Preference number: 5 (lower is better)
Translates to: NFLESMIEGERQCSS*IALEPEHSPSRPWF
Trigger: AAACCAGGGACGGGAGGGCGAGTGTTCAGGTTCTAGAGCTATGCAGCTGGAGCACTGCCTTTCTCCTTCTATCATGCTCTCCAAGAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS GCA 90 bp CATGAAAGACTGGCCTTCACCCGTGTTCTGGAACCCGAGGTTTGCTaGTGGAAGCCTCCAAAGTACTTAGTGTCTATTGTTTCCCCTGTG +
Preference number: 5 (lower is better)
Translates to: HERLAFTRVLEPEVC*WKPPKYLVSIVSPV
Trigger: CACAGGGGAAACAATAGACACTAAGTACTTTGGAGGCTTCCAGCAGCAAACCTCGGGTTCCAGAACACGGGTGAAGGCCAGTCTTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CCA 90 bp GTCTTGTCAGACCTTAATCCTTTGGGGAGGAGATTCCCTGGTGAGTaGCCAAGCAAGCTCCTAGTACCCCATGAACCCTTATACTTCTCC +
Preference number: 5 (lower is better)
Translates to: VLSDLNPLGRRFPGE*PSKLLVPHEPLYFS
Trigger: GGAGAAGTATAAGGGTTCATGGGGTACTAGGAGCTTGCTTGGCCACTCACCAGGGAATCTCCTCCCCAAAGGATTAAGGTCTGACAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS-3UTR CAA 90 bp ACTGAAAGATATTCAGAAACAGTTTGTCAGCATATTTGGCACCTGCACAGACCAGCCAGCACCTCGCTCTaGAGCGGGGACGAACTCTCG +
Preference number: 5 (lower is better)
Translates to: TERYSETVCQHIWHLHRPASTSL*SGDELS
Trigger: CGAGAGTTCGTCCCCGCTCAAGAGCGAGGTGCTGGC...TGGTCTGTGCAGGTGCCAAATATGCTGACAAACTGTTTCTGAATATCTTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS GCA 90 bp GATTTCCTTGCACATTGGTGTCCGCTTTGCCGCAAGGAACCCATTTaGCTCCTTGAAACCTCCAGTGATTGGGATCCGCCAAAATCACAT +
Preference number: 5 (lower is better)
Translates to: DFLAHWCPLCRKEPI*LLETSSDWDPPKSH
Trigger: ATGTGATTTTGGCGGATCCCAATCACTGGAGGTTTCAAGGAGGCAAATGGGTTCCTTGCGGCAAAGCGGACACCAATGTGCAAGGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS CCA 90 bp AGACAGGAGAGAGTTTACTTCTCTGGACGTCCCCTGGTGAGTCCTTaGAGTCAGGAAAATTGTCTGTATCTGACTGATTCGTCATCCCCC +
Preference number: 5 (lower is better)
Translates to: RQERVYFSGRPLVSP*SQENCLYLTDSSSP
Trigger: GGGGGATGACGAATCAGTCAGATACAGACAATTTTCCTGACTCCAAGGACTCACCAGGGGACGTCCAGAGAAGTAAACTCTCTCCTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS-3UTR CAA 90 bp AGTTTGTCAGCATATTTGGCACCTGCACAGACCAGTAATGGATTTGGCACTTTGGTAGAACGGAGCTCCTaGGTAGGAGTGGCCGTACTG +
Preference number: 5 (lower is better)
Translates to: SLSAYLAPAQTSNGFGTLVERSS*VGVAVL
Trigger: CAGTACGGCCACTCCTACCAAGGAGCTCCGTTCTAC...CAAAGTGCCAAATCCATTACTGGTCTGTGCAGGTGCCAAATATGCTGACAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CAA 90 bp AAAAAGGTTAAAATCACGCTCGGAGACCTGCACTTATTCGCTGCAGACGGCCATCGATTTCCTTGCACATaGGTGTCCGCTTTGCCGCAA +
Preference number: 5 (lower is better)
Translates to: KKVKITLGDLHLFAADGHRFPCT*VSALPQ
Trigger: TTGCGGCAAAGCGGACACCAATGTGCAAGGAAATCG...ATGGCCGTCTGCAGCGAATAAGTGCAGGTCTCCGAGCGTGATTTTAACCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CAA 90 bp CACTTAATCGACTTGCCTATGAACAGACACCTATCCTTTAAAGGTGTTTGGGTGCTGGAGTCGATGGACTaGATCGAGGAGGGCGTCTCG +
Preference number: 5 (lower is better)
Translates to: HLIDLPMNRHLSFKGVWVLESMD*IEEGVS
Trigger: CGAGACGCCCTCCTCGATCAAGTCCATCGACTCCAG...CACCCAAACACCTTTAAAGGATAGGTGTCTGTTCATAGGCAAGTCGATTAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS TCA 90 bp GATAGAAGGAGAAAGGCAGTGCTCCAGCTGCATAGCTCTAGAACCTaGACACTCGCCCTCCCGTCCCTGGTTTTTAAAGTCCTATTTATC +
Preference number: 5 (lower is better)
Translates to: DRRRKAVLQLHSSRT*TLALPSLVFKVLFI
Trigger: GATAAATAGGACTTTAAAAACCAGGGACGGGAGGGCGAGTGTTCAGGTTCTAGAGCTATGCAGCTGGAGCACTGCCTTTCTCCTTCTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS GCA 90 bp ACATTGAGAAATTTCTTGGAGAGCATGATAGAAGGAGAAAGGCAGTaGTCCAGCTGCATAGCTCTAGAACCTGAACACTCGCCCTCCCGT +
Preference number: 5 (lower is better)
Translates to: TLRNFLESMIEGERQ*SSCIALEPEHSPSR
Trigger: ACGGGAGGGCGAGTGTTCAGGTTCTAGAGCTATGCAGCTGGAGCACTGCCTTTCTCCTTCTATCATGCTCTCCAAGAAATTTCTCAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS GCA 90 bp AATCATGAAAGACTGGCCTTCACCCGTGTTCTGGAACCCGAGGTTTaGTGCTGGAAGCCTCCAAAGTACTTAGTGTCTATTGTTTCCCCT +
Preference number: 5 (lower is better)
Translates to: NHERLAFTRVLEPEV*CWKPPKYLVSIVSP
Trigger: AGGGGAAACAATAGACACTAAGTACTTTGGAGGCTTCCAGCAGCAAACCTCGGGTTCCAGAACACGGGTGAAGGCCAGTCTTTCATGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS-3UTR CAA 90 bp CACTTAATCGACTTGCCTATGAACAGACACCTATCCTTTAAAGGTGTTTGGGTGAGCCAAAGGGGCCTGTaGCACAGGTACACCTGTGCT +
Preference number: 5 (lower is better)
Translates to: HLIDLPMNRHLSFKGVWVSQRGL*HRYTCA
Trigger: AGCACAGGTGTACCTGTGCAACAGGCCCCTTTGGCT...CACCCAAACACCTTTAAAGGATAGGTGTCTGTTCATAGGCAAGTCGATTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CAA 90 bp TTTGTTCCACTAAAATTATTAACATCCCTACCATCCATCCATCCATCCATCCACGCGAAGTCCAGCCGGTaGTTGGCCGGCGTCACAAAC +
Preference number: 5 (lower is better)
Translates to: FVPLKLLTSLPSIHPSIHAKSSR*LAGVTN
Trigger: GTTTGTGACGCCGGCCAACAACCGGCTGGACTTCGC...GTGGATGGATGGATGGATGGATGGTAGGGATGTTAATAATTTTAGTGGAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CAA 90 bp TTTACAGCATATAAAGGTGAAGGGGTACTGAAAGATATTCAGAAACAGTTTGTCAGCACCGAGCCCGACTaGGTGCCGCAGTACTGCGGG +
Preference number: 5 (lower is better)
Translates to: FTAYKGEGVLKDIQKQFVSTEPD*VPQYCG
Trigger: CCCGCAGTACTGCGGCACCAAGTCGGGCTCGGTGCT...GACAAACTGTTTCTGAATATCTTTCAGTACCCCTTCACCTTTATATGCTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS CCA 90 bp CCACCCCCACACCCTCCATCTACAAACTTGCAGTCCAGGATTTCCTaGAGAATACAAGAGGCCACAGACCTCTATCATTCCCAAAATAAA +
Preference number: 5 (lower is better)
Translates to: PPPHPPSTNLQSRIS*RIQEATDLYHSQNK
Trigger: TTTATTTTGGGAATGATAGAGGTCTGTGGCCTCTTGTATTCTCCAGGAAATCCTGGACTGCAAGTTTGTAGATGGAGGGTGTGGGGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS-3UTR CAA 90 bp AAAAAGGTTAAAATCACGCTCGGAGACCTGCACTTATTCGCTGCAGACGGCCATGAACTTCTCTCCAGGTaGTCAGTGGTCGAGATAATG +
Preference number: 5 (lower is better)
Translates to: KKVKITLGDLHLFAADGHELLSR*SVVEIM
Trigger: CATTATCTCGACCACTGACAACCTGGAGAGAAGTTC...ATGGCCGTCTGCAGCGAATAAGTGCAGGTCTCCGAGCGTGATTTTAACCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CAA 90 bp GTGGGTCCAGGTTCTAGAGTCAACATCCTATGGTTAATGTGGAGGCCGAGACTTACCACCATCTGCCCATaGTTATTTGAAGCTCCTTTG +
Preference number: 5 (lower is better)
Translates to: VGPGSRVNILWLMWRPRLTTICP*LFEAPL
Trigger: CAAAGGAGCTTCAAATAACAATGGGCAGATGGTGGT...AAGTCTCGGCCTCCACATTAACCATAGGATGTTGACTCTAGAACCTGGACCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CAA 90 bp CACTTAATCGACTTGCCTATGAACAGACACCTATCCTTTAAAGGTGTTTGGGTGAGGCGGGGCTGGTACTaGTGCAAGGACTGTAAAACC +
Preference number: 5 (lower is better)
Translates to: HLIDLPMNRHLSFKGVWVRRGWY*CKDCKT
Trigger: GGTTTTACAGTCCTTGCACAAGTACCAGCCCCGCCT...CACCCAAACACCTTTAAAGGATAGGTGTCTGTTCATAGGCAAGTCGATTAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CAA 90 bp AAAGACGAGGGGGAGGGGAATTGTAGGAGGATAACTCCACAGAAGAAGAGTAAGCCAGTTGACTTTGCTTaGCAGGCATCATGCCACTTA +
Preference number: 5 (lower is better)
Translates to: KDEGEGNCRRITPQKKSKPVDFA*QASCHL
Trigger: TAAGTGGCATGATGCCTGCAAAGCAAAGTCAACTGG...CTTACTCTTCTTCTGTGGAGTTATCCTCCTACAATTCCCCTCCCCCTCGTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS GCA 90 bp AGGGGCACAAGCAAGGACTTTCATCCCACTTCTCCAACATATGTGTaGACATTAAGGCAGATTTACCTAGGGAGTAAGATGCTCTTTGCC +
Preference number: 5 (lower is better)
Translates to: RGTSKDFHPTSPTYV*TLRQIYLGSKMLFA
Trigger: GGCAAAGAGCATCTTACTCCCTAGGTAAATCTGCCTTAATGTGCACACATATGTTGGAGAAGTGGGATGAAAGTCCTTGCTTGTGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS-3UTR CAA 90 bp GTGGGTCCAGGTTCTAGAGTCAACATCCTATGGTTAATGTGGAGGCCGAGACTTAACATACAACTCCAGTaGACTTTGCTTTGCAGGCAT +
Preference number: 5 (lower is better)
Translates to: VGPGSRVNILWLMWRPRLNIQLQ*TLLCRH
Trigger: ATGCCTGCAAAGCAAAGTCAACTGGAGTTGTATGTT...AAGTCTCGGCCTCCACATTAACCATAGGATGTTGACTCTAGAACCTGGACCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS GCA 90 bp TCGCATATGCTAAGGAGACTGTTAACAACTGCCAGAGGAGCCACATaGACTTTTAGGCAGAATTGCCCGTTTCAGACAGACATAGACAAT +
Preference number: 5 (lower is better)
Translates to: SHMLRRLLTTARGAT*TFRQNCPFQTDIDN
Trigger: ATTGTCTATGTCTGTCTGAAACGGGCAATTCTGCCTAAAAGTGCATGTGGCTCCTCTGGCAGTTGTTAACAGTCTCCTTAGCATATGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS-3UTR CAA 90 bp CACTTAATCGACTTGCCTATGAACAGACACCTATCCTTTAAAGGTGTTTGGGTGTCCCCTGGTGAGTCCTaGGAGTCAGGAAAATTGTCT +
Preference number: 5 (lower is better)
Translates to: HLIDLPMNRHLSFKGVWVSPGES*ESGKLS
Trigger: AGACAATTTTCCTGACTCCAAGGACTCACCAGGGGA...CACCCAAACACCTTTAAAGGATAGGTGTCTGTTCATAGGCAAGTCGATTAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CAA 90 bp ACTGAAAGATATTCAGAAACAGTTTGTCAGCATATTTGGCACCTGCACAGACCAACATTGGTGTCCGCTTaGCCGCAAGGAACCCATTTG +
Preference number: 5 (lower is better)
Translates to: TERYSETVCQHIWHLHRPTLVSA*PQGTHL
Trigger: CAAATGGGTTCCTTGCGGCAAAGCGGACACCAATGT...TGGTCTGTGCAGGTGCCAAATATGCTGACAAACTGTTTCTGAATATCTTTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS GCA 90 bp ATTCCCAAAATAAATCACGGAATTATAGAGGAGCCAATCTGTCTATaGAGGGACCTGAGCAAGATACAGACCATCAAGGGAACGACTTCC +
Preference number: 5 (lower is better)
Translates to: IPKINHGIIEEPICL*RDLSKIQTIKGTTS
Trigger: GGAAGTCGTTCCCTTGATGGTCTGTATCTTGCTCAGGTCCCTGCATAGACAGATTGGCTCCTCTATAATTCCGTGATTTATTTTGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CCA 90 bp AGGCCCACCAACAACTTTGTAATCCACAGGAAAGTTAAAATTAGGTaGAGGAAACCTCTGACCAAAAACCACGCAAGTACCAAGCCACAA +
Preference number: 5 (lower is better)
Translates to: RPTNNFVIHRKVKIR*RKPLTKNHASTKPQ
Trigger: TTGTGGCTTGGTACTTGCGTGGTTTTTGGTCAGAGGTTTCCTCCACCTAATTTTAACTTTCCTGTGGATTACAAAGTTGTTGGTGGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS-3UTR CAA 90 bp AGAAGAAGAGTAAGTAGGAAAACCAAAAGGTTTACAGCAAAGTTGAAGGTCGGTTCCAAAAGAGATTTCTaGGCGCATCCAGTGAGCCCC +
Preference number: 5 (lower is better)
Translates to: RRRVSRKTKRFTAKLKVGSKRDF*AHPVSP
Trigger: GGGGCTCACTGGATGCGCCAAGAAATCTCTTTTGGA...ACCGACCTTCAACTTTGCTGTAAACCTTTTGGTTTTCCTACTTACTCTTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CAA 90 bp AAAGACGAGGGGGAGGGGAATTGTAGGAGGATAACTCCACAGAAGAAGAGTAAGAACTGGTTTTGTGCCTaGACGAGAATAAAAACTAGC +
Preference number: 5 (lower is better)
Translates to: KDEGEGNCRRITPQKKSKNWFCA*TRIKTS
Trigger: GCTAGTTTTTATTCTCGTCAAGGCACAAAACCAGTT...CTTACTCTTCTTCTGTGGAGTTATCCTCCTACAATTCCCCTCCCCCTCGTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CAA 90 bp AAGGTGTTTGGGTGGATTCTCCTTAGCTATTTGTGTGCATTAGGGCACATAGTAAGTTTGTCAGCATATTaGGCACCTGCACAGACCAGT +
Preference number: 5 (lower is better)
Translates to: KVFGWILLSYLCALGHIVSLSAY*APAQTS
Trigger: ACTGGTCTGTGCAGGTGCCAAATATGCTGACAAACT...TACTATGTGCCCTAATGCACACAAATAGCTAAGGAGAATCCACCCAAACACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS CCA 90 bp AAATCAATCAGTATTAGTACTTGGGAAGGTCGGGCACTCCAAAATTaGGCCGACGGAGGTGTTGCCAATGAGAACAACTTTACAGATTTA +
Preference number: 5 (lower is better)
Translates to: KSISISTWEGRALQN*ADGGVANENNFTDL
Trigger: TAAATCTGTAAAGTTGTTCTCATTGGCAACACCTCCGTCGGCCCAATTTTGGAGTGCCCGACCTTCCCAAGTACTAATACTGATTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS-3UTR CAA 90 bp ACTGAAAGATATTCAGAAACAGTTTGTCAGCATATTTGGCACCTGCACAGACCAATAGACCCGATTTCCTaGCACATTGGTGTCCGCTTT +
Preference number: 5 (lower is better)
Translates to: TERYSETVCQHIWHLHRPIDPIS*HIGVRF
Trigger: AAAGCGGACACCAATGTGCAAGGAAATCGGGTCTAT...TGGTCTGTGCAGGTGCCAAATATGCTGACAAACTGTTTCTGAATATCTTTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CAA 90 bp CACTTAATCGACTTGCCTATGAACAGACACCTATCCTTTAAAGGTGTTTGGGTGTGCCACTTAATCGACTaGCCTATGAACAGACACCTA +
Preference number: 5 (lower is better)
Translates to: HLIDLPMNRHLSFKGVWVCHLID*PMNRHL
Trigger: TAGGTGTCTGTTCATAGGCAAGTCGATTAAGTGGCA...CACCCAAACACCTTTAAAGGATAGGTGTCTGTTCATAGGCAAGTCGATTAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS TCA 90 bp AGATTTATGACACTATCTGAACTCTTAGGCACTATGGACCCTGAGTaGGAATTGCAGAACAAGCCCAGAAAGCATTCAGTTTACACCTAC +
Preference number: 5 (lower is better)
Translates to: RFMTLSELLGTMDPE*ELQNKPRKHSVYTY
Trigger: GTAGGTGTAAACTGAATGCTTTCTGGGCTTGTTCTGCAATTCTCACTCAGGGTCCATAGTGCCTAAGAGTTCAGATAGTGTCATAAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS TCA 90 bp GGCCTAGAAAATCCCATTAGAATTGAGAGGAAACCAAGGGTTGGATaGAGATTGGTAGAAGTGTTTTCTCATACACATGCACACATGCCT +
Preference number: 5 (lower is better)
Translates to: GLENPIRIERKPRVG*RLVEVFSHTHAHMP
Trigger: AGGCATGTGTGCATGTGTATGAGAAAACACTTCTACCAATCTTCATCCAACCCTTGGTTTCCTCTCAATTCTAATGGGATTTTCTAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS-3UTR CAA 90 bp TTTGGGTGGATTCTCCTTAGCTATTTGTGTGCATTAGGGCACATAGTAATTATTCAACTCCAGTTGACTTaGCTTTGCAGGCATCATGCC +
Preference number: 5 (lower is better)
Translates to: FGWILLSYLCALGHIVIIQLQLT*LCRHHA
Trigger: GGCATGATGCCTGCAAAGCAAAGTCAACTGGAGTTG...AATAATTACTATGTGCCCTAATGCACACAAATAGCTAAGGAGAATCCACCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CAA 90 bp CACTTAATCGACTTGCCTATGAACAGACACCTATCCTTTAAAGGTGTTTGGGTGAGACCAGTAATGGATTaGGCACTTTGGGGAAAAACA +
Preference number: 5 (lower is better)
Translates to: HLIDLPMNRHLSFKGVWVRPVMD*ALWGKT
Trigger: TGTTTTTCCCCAAAGTGCCAAATCCATTACTGGTCT...CACCCAAACACCTTTAAAGGATAGGTGTCTGTTCATAGGCAAGTCGATTAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS TCA 90 bp AAATCTCAAAATCTACAGGACTCTCCTCTAACATCTCTAGTCTCTTaGGCCATATACTTTCCACTGTGCTGGGCACACCTTTTTAGATTG +
Preference number: 5 (lower is better)
Translates to: KSQNLQDSPLTSLVS*AIYFPLCWAHLFRL
Trigger: CAATCTAAAAAGGTGTGCCCAGCACAGTGGAAAGTATATGGCTCAAGAGACTAGAGATGTTAGAGGAGAGTCCTGTAGATTTTGAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS-3UTR CAA 90 bp TTTACAGCATATAAAGGTGAAGGGGTACTGAAAGATATTCAGAAACAGTTTGTCAACCCATTTGCCTCCTaGAAACCTCCAGTGATTGGG +
Preference number: 5 (lower is better)
Translates to: FTAYKGEGVLKDIQKQFVNPFAS*KPPVIG
Trigger: CCCAATCACTGGAGGTTTCAAGGAGGCAAATGGGTT...GACAAACTGTTTCTGAATATCTTTCAGTACCCCTTCACCTTTATATGCTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CAA 90 bp CACTTAATCGACTTGCCTATGAACAGACACCTATCCTTTAAAGGTGTTTGGGTGAAGCATGAACTGGTTTaGTGCCTTGACGAGAATAAA +
Preference number: 5 (lower is better)
Translates to: HLIDLPMNRHLSFKGVWVKHELV*CLDENK
Trigger: TTTATTCTCGTCAAGGCACAAAACCAGTTCATGCTT...CACCCAAACACCTTTAAAGGATAGGTGTCTGTTCATAGGCAAGTCGATTAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CAA 90 bp AAGGTGTTTGGGTGGATTCTCCTTAGCTATTTGTGTGCATTAGGGCACATAGTAATATTCAGAAACAGTTaGTCAGCATATTTGGCACCT +
Preference number: 5 (lower is better)
Translates to: KVFGWILLSYLCALGHIVIFRNS*SAYLAP
Trigger: AGGTGCCAAATATGCTGACAAACTGTTTCTGAATAT...TACTATGTGCCCTAATGCACACAAATAGCTAAGGAGAATCCACCCAAACACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CAA 90 bp AGAAGAAGAGTAAGTAGGAAAACCAAAAGGTTTACAGCAAAGTTGAAGGTCGGTGTGATCTATTTTCAGTaGTGTAATATCCGTGTTCTG +
Preference number: 5 (lower is better)
Translates to: RRRVSRKTKRFTAKLKVGVIYFQ*CNIRVL
Trigger: CAGAACACGGATATTACACAACTGAAAATAGATCAC...ACCGACCTTCAACTTTGCTGTAAACCTTTTGGTTTTCCTACTTACTCTTCTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS-3UTR CAA 90 bp TTTGGGTGGATTCTCCTTAGCTATTTGTGTGCATTAGGGCACATAGTAATTATTATTCTCCTTAGCTATTaGTGTGCATTAGGGCACATA +
Preference number: 5 (lower is better)
Translates to: FGWILLSYLCALGHIVIIILLSY*CALGHI
Trigger: TATGTGCCCTAATGCACACAAATAGCTAAGGAGAAT...AATAATTACTATGTGCCCTAATGCACACAAATAGCTAAGGAGAATCCACCCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389554.8
CDS CAA 90 bp GCGGCCGCGGCGCTGTTGGGCCAGCAGGGCAGCACCGAGCCCGACTaGGTGCCGCAGTACTGCGGGGGACTGCGGGCGCCCCAGCCCGAC +
Preference number: 6 (lower is better)
Translates to: AAAALLGQQGSTEPD*VPQYCGGLRAPQPD
Trigger: GTCGGGCTGGGGCGCCCGCAGTCCCCCGCAGTACTGCGGCACCAAGTCGGGCTCGGTGCTGCCCTGCTGGCCCAACAGCGCCGCGGCCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000410035.1
CDS GCA 72 bp TCCTCGGCCTGCTGCGGCGACAGCAGCCCGTTGGTGTaGGGCACGCTGCGGTCCGTACCCGGCCCGGGGCCC +
Preference number: 6 (lower is better)
Translates to: SSACCGDSSPLV*GTLRSVPGPGP
Trigger: GGGCCCCGGGCCGGGTACGGACCGCAGCGTGCCGCACACCAACGGGCTGCTGTCGCCGCAGCAGGCCGAGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000463544.1
ENST00000477804.5
CDS GCA 72 bp CGTTGCGGCGAGGGCGCGCCCGGGTCCTCGGCCTGCTaGGGCGACAGCAGCCCGTTGGTGTGCGGCACGCTG +
Preference number: 6 (lower is better)
Translates to: RCGEGAPGSSAC*GDSSPLVCGTL
Trigger: CAGCGTGCCGCACACCAACGGGCTGCTGTCGCCGCAGCAGGCCGAGGACCCGGGCGCGCCCTCGCCGCAACG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000463544.1
ENST00000477804.5
CDS GCA 72 bp AGGGGAGCGCCGGGTGGCGTGTTAACGCGGTCGCTGTaGGCGTGGCTGTGTGCGCCCGGCTGCGCGCCCGGG +
Preference number: 6 (lower is better)
Translates to: RGAPGGVLTRSL*AWLCAPGCAPG
Trigger: CCCGGGCGCGCAGCCGGGCGCACACAGCCACGCGCACAGCGACCGCGTTAACACGCCACCCGGCGCTCCCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CCA 72 bp CGCTGTTGGGCCAGCAGGGCAGCACCGAGCCCGACTTaGTGCCGCAGTACTGCGGGGGACTGCGGGCGCCCC +
Preference number: 6 (lower is better)
Translates to: RCWASRAAPSPT*CRSTAGDCGRP
Trigger: GGGGCGCCCGCAGTCCCCCGCAGTACTGCGGCACCAAGTCGGGCTCGGTGCTGCCCTGCTGGCCCAACAGCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000463544.1
CDS CAA 72 bp CGGGCCCCGGGCACGATCTGCGAGCGCGGCGAGTCGTaGGGCGAGGGGGTCAGGCGGTCCATGTCACAGCCG +
Preference number: 6 (lower is better)
Translates to: RAPGTICERGES*GEGVRRSMSQP
Trigger: CGGCTGTGACATGGACCGCCTGACCCCCTCGCCCAACGACTCGCCGCGCTCGCAGATCGTGCCCGGGGCCCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000411412.5
ENST00000463544.1
ENST00000477804.5
ENST00000489530.1
CDS CAA 72 bp GCGCTGTTGGGCCAGCAGGGCAGCACCGAGCCCGACTaGGTGCCGCAGTACTGCGGGGGACTGCGGGCGCCC +
Preference number: 6 (lower is better)
Translates to: ALLGQQGSTEPD*VPQYCGGLRAP
Trigger: GGGCGCCCGCAGTCCCCCGCAGTACTGCGGCACCAAGTCGGGCTCGGTGCTGCCCTGCTGGCCCAACAGCGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000463544.1
CDS GCA 72 bp TCCAGCCGGTTGTTGGCCGGCGTCACAAACCAGCGTTaGGGCGAGGGCGCGCCCGGGTCCTCGGCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SSRLLAGVTNQR*GEGAPGSSACC
Trigger: GCAGCAGGCCGAGGACCCGGGCGCGCCCTCGCCGCAACGCTGGTTTGTGACGCCGGCCAACAACCGGCTGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000463544.1
ENST00000477804.5
CDS GCA 72 bp CGCCCGCCGCCGCGTAAGAGAGCAGCGTGGCCGCGTTaGCCGCGAAGTCCGTGGCCGTGTCATAGGCCGAGG +
Preference number: 6 (lower is better)
Translates to: RPPPRKRAAWPR*PRSPWPCHRPR
Trigger: CCTCGGCCTATGACACGGCCACGGACTTCGCGGGCAACGCGGCCACGCTGCTCTCTTACGCGGCGGCGGGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000411412.5
ENST00000463544.1
CDS GCA 72 bp TGTTGGGCCAGCAGGGCAGCACCGAGCCCGACTTGGTaGCGCAGTACTGCGGGGGACTGCGGGCGCCCCAGC +
Preference number: 6 (lower is better)
Translates to: CWASRAAPSPTW*RSTAGDCGRPS
Trigger: GCTGGGGCGCCCGCAGTCCCCCGCAGTACTGCGGCACCAAGTCGGGCTCGGTGCTGCCCTGCTGGCCCAACA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000463544.1
CDS GCA 72 bp TCCAGCCGGTTGTTGGCCGGCGTCACAAACCAGCGTTaGGGCGAGGGCGCGCCCGGGTCCTCGGCCTGGAAC +
Preference number: 6 (lower is better)
Translates to: SSRLLAGVTNQR*GEGAPGSSAWN
Trigger: GTTCCAGGCCGAGGACCCGGGCGCGCCCTCGCCGCAACGCTGGTTTGTGACGCCGGCCAACAACCGGCTGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411412.5
CDS CCA 72 bp GGTGCGCCGGTCCGTGCTGGCCGGGGTACGGGAACATaGCACTGGGAGCAGTGGCCGCAGACTGTGGCTGGC +
Preference number: 6 (lower is better)
Translates to: GAPVRAGRGTGT*HWEQWPQTVAG
Trigger: GCCAGCCACAGTCTGCGGCCACTGCTCCCAGTGCCATGTTCCCGTACCCCGGCCAGCACGGACCGGCGCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS CCA 72 bp CGGGGCCCGCGCCCGCGCCCGGGTGGAAGCGGGCCTTaGCGTAGTTGCTCACGAACTGGTCCTGCAGGAAAG +
Preference number: 6 (lower is better)
Translates to: RGPRPRPGGSGP*RSCSRTGPAGK
Trigger: CTTTCCTGCAGGACCAGTTCGTGAGCAACTACGCCAAGGCCCGCTTCCACCCGGGCGCGGGCGCGGGCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000463544.1
ENST00000477804.5
CDS CCA 72 bp GCGCCTTCACGCCCGCCGCCGCGTAAGAGAGCAGCGTaGCCGCGTTGCCCGCGAAGTCCGTGGCCGTGTCAT +
Preference number: 6 (lower is better)
Translates to: APSRPPPRKRAA*PRCPRSPWPCH
Trigger: ATGACACGGCCACGGACTTCGCGGGCAACGCGGCCACGCTGCTCTCTTACGCGGCGGCGGGCGTGAAGGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000411412.5
ENST00000463544.1
CDS CCA 72 bp AGGGCGTCTCGATCCAGCTGGAATCGGACAGGTCCTTaGGCTTGGCGTCCTCGGCGGCGCCGGGCGGCAGCG +
Preference number: 6 (lower is better)
Translates to: RASRSSWNRTGP*AWRPRRRRAAA
Trigger: CGCTGCCGCCCGGCGCCGCCGAGGACGCCAAGCCCAAGGACCTGTCCGATTCCAGCTGGATCGAGACGCCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000410035.1
CDS CCA 72 bp CGGCCTGGAACTGGTCCTGCAGGAAAGAGCCGGCCATaGCGTAGCGGGCCCCGGGCACGATCTGCGAGCGCG +
Preference number: 6 (lower is better)
Translates to: RPGTGPAGKSRP*RSGPRARSASA
Trigger: CGCGCTCGCAGATCGTGCCCGGGGCCCGCTACGCCATGGCCGGCTCTTTCCTGCAGGACCAGTTCCAGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411412.5
CDS CAA 72 bp GAGGGCGTCTCGATCCAGCTGGAATCGGACAGGTCCTaGGGCTTGGCGTCCTCGGCGGCGCCGGGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: EGVSIQLESDRS*GLASSAAPGGS
Trigger: GCTGCCGCCCGGCGCCGCCGAGGACGCCAAGCCCAAGGACCTGTCCGATTCCAGCTGGATCGAGACGCCCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000410035.1
CDS CCA 72 bp CTGCCGATGGAGAAGGCGGGGTGCGCCGGTCCGTGCTaGCCGGGGTACGGGAACATGGCACTGGGAGCAGTG +
Preference number: 6 (lower is better)
Translates to: LPMEKAGCAGPC*PGYGNMALGAV
Trigger: CACTGCTCCCAGTGCCATGTTCCCGTACCCCGGCCAGCACGGACCGGCGCACCCCGCCTTCTCCATCGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS CAA 90 bp TTGGCGCAGTTCTTCTCGCAGTCCCGCTGGGCCAGCACCTCGCTCTaGAGCGGGGACGAACTCTCGGACACGGGCGTGTCGGCCGGCGAG +
Preference number: 6 (lower is better)
Translates to: LAQFFSQSRWASTSL*SGDELSDTGVSAGE
Trigger: CTCGCCGGCCGACACGCCCGTGTCCGAGAGTTCGTCCCCGCTCAAGAGCGAGGTGCTGGCCCAGCGGGACTGCGAGAAGAACTGCGCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000410035.1
CDS GCA 72 bp CGCCCGCGCCCGGGTGGAAGCGGGCCTTGGCGTAGTTaGTCACGAACTGGTCCTGCAGGAAAGAGCCGGCCA +
Preference number: 6 (lower is better)
Translates to: RPRPGGSGPWRS*SRTGPAGKSRP
Trigger: TGGCCGGCTCTTTCCTGCAGGACCAGTTCGTGAGCAACTACGCCAAGGCCCGCTTCCACCCGGGCGCGGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000463544.1
ENST00000477804.5
CDS CCA 72 bp TGCTCACGAACTGGTCCTGCAGGAAAGAGCCGGCCATaGCGTAGCGGGCCCCGGGCACGATCTGCGAGCGCG +
Preference number: 6 (lower is better)
Translates to: CSRTGPAGKSRP*RSGPRARSASA
Trigger: CGCGCTCGCAGATCGTGCCCGGGGCCCGCTACGCCATGGCCGGCTCTTTCCTGCAGGACCAGTTCGTGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000463544.1
ENST00000477804.5
CDS CCA 72 bp AAGAGAGCAGCGTGGCCGCGTTGCCCGCGAAGTCCGTaGCCGTGTCATAGGCCGAGGCCGCGAAGTCCAGCC +
Preference number: 6 (lower is better)
Translates to: KRAAWPRCPRSP*PCHRPRPRSPA
Trigger: GGCTGGACTTCGCGGCCTCGGCCTATGACACGGCCACGGACTTCGCGGGCAACGCGGCCACGCTGCTCTCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000411412.5
ENST00000463544.1
CDS CAA 90 bp GCGAGGTTGGCGACCTGCGTCTCCACCTGTCCGTGCATGCCAGTGTaGATGCGTCCCTCCCATCGCCCAGCCGCTGGCCAGGGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: ARLATCVSTCPCMPV*MRPSHRPAAGQGSS
Trigger: GGAAGAGCCCTGGCCAGCGGCTGGGCGATGGGAGGGACGCATCAACACTGGCATGCACGGACAGGTGGAGACGCAGGTCGCCAACCTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS TCA 72 bp TCTTCTCGCAGTCCCGCTGGGCCAGCACCTCGCTCTTaGGCGGGGACGAACTCTCGGACACGGGCGTGTCGG +
Preference number: 6 (lower is better)
Translates to: SSRSPAGPAPRS*AGTNSRTRACR
Trigger: CCGACACGCCCGTGTCCGAGAGTTCGTCCCCGCTCAAGAGCGAGGTGCTGGCCCAGCGGGACTGCGAGAAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000410035.1
CDS TCA 72 bp CGACCTGCGTCTCCACCTGTCCGTGCATGCCAGTGTTaGTGCGTCCCTCCCATCGCCCAGCCGCTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: RPASPPVRACQC*CVPPIAQPLAR
Trigger: CCTGGCCAGCGGCTGGGCGATGGGAGGGACGCATCAACACTGGCATGCACGGACAGGTGGAGACGCAGGTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS GCA 72 bp CCCAAATCGTCGCTGCCGCGGCAGTCACAGCCTAGGTaGACTTGTCCCCGGCTGCGCCTAGAGCAGCGGCAG +
Preference number: 6 (lower is better)
Translates to: PKSSLPRQSQPR*TCPRLRLEQRQ
Trigger: CTGCCGCTGCTCTAGGCGCAGCCGGGGACAAGTGCACCTAGGCTGTGACTGCCGCGGCAGCGACGATTTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS GCA 72 bp GCGCCTTCCACTCCGCTCCCGACCCCAAATCGTCGCTaGCGCGGCAGTCACAGCCTAGGTGCACTTGTCCCC +
Preference number: 6 (lower is better)
Translates to: APSTPLPTPNRR*RGSHSLGALVP
Trigger: GGGGACAAGTGCACCTAGGCTGTGACTGCCGCGGCAGCGACGATTTGGGGTCGGGAGCGGAGTGGAAGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CCA 72 bp AGTGGCCGTACTGCTGTGGGTAGGGGTAGCCGGCCGTaGGGTATCCCTGCGGCGAGGAGTTGGACAGGAGGC +
Preference number: 6 (lower is better)
Translates to: SGRTAVGRGSRP*GIPAARSWTGG
Trigger: GCCTCCTGTCCAACTCCTCGCCGCAGGGATACCCCACGGCCGGCTACCCCTACCCACAGCAGTACGGCCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS CCA 72 bp TGTCATAGGCCGAGGCCGCGAAGTCCAGCCGGTTGTTaGCCGGCGTCACAAACCAGCGTTGCGGCGAGGGCG +
Preference number: 6 (lower is better)
Translates to: CHRPRPRSPAGC*PASQTSVAARA
Trigger: CGCCCTCGCCGCAACGCTGGTTTGTGACGCCGGCCAACAACCGGCTGGACTTCGCGGCCTCGGCCTATGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000411412.5
ENST00000463544.1
ENST00000477804.5
CDS CCA 72 bp ACACGGGCGTGTCGGCCGGCGAGATCCGCCTCCGCTTaGCCTGCTCGTAAATCCCCGAGTCGCTGGAGTCGA +
Preference number: 6 (lower is better)
Translates to: TRACRPARSASA*PARKSPSRWSR
Trigger: TCGACTCCAGCGACTCGGGGATTTACGAGCAGGCCAAGCGGAGGCGGATCTCGCCGGCCGACACGCCCGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000410035.1
CDS CAA 72 bp GCGACCTGCGTCTCCACCTGTCCGTGCATGCCAGTGTaGATGCGTCCCTCCCATCGCCCAGCCGCTGGCCAG +
Preference number: 6 (lower is better)
Translates to: ATCVSTCPCMPV*MRPSHRPAAGQ
Trigger: CTGGCCAGCGGCTGGGCGATGGGAGGGACGCATCAACACTGGCATGCACGGACAGGTGGAGACGCAGGTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CCA 72 bp GAACGGAGCTCCTTGGTAGGAGTGGCCGTACTGCTGTaGGTAGGGGTAGCCGGCCGTGGGGTATCCCTGCGG +
Preference number: 6 (lower is better)
Translates to: ERSSLVGVAVLL*VGVAGRGVSLR
Trigger: CCGCAGGGATACCCCACGGCCGGCTACCCCTACCCACAGCAGTACGGCCACTCCTACCAAGGAGCTCCGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS CAA 72 bp TTCTTCTCGCAGTCCCGCTGGGCCAGCACCTCGCTCTaGAGCGGGGACGAACTCTCGGACACGGGCGTGTCG +
Preference number: 6 (lower is better)
Translates to: FFSQSRWASTSL*SGDELSDTGVS
Trigger: CGACACGCCCGTGTCCGAGAGTTCGTCCCCGCTCAAGAGCGAGGTGCTGGCCCAGCGGGACTGCGAGAAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000410035.1
CDS CAA 90 bp CACCAGCCCCGGCTGGGTGGAGGAGAACTGGTAGAACGGAGCTCCTaGGTAGGAGTGGCCGTACTGCTGTGGGTAGGGGTAGCCGGCCGT +
Preference number: 6 (lower is better)
Translates to: HQPRLGGGELVERSS*VGVAVLLWVGVAGR
Trigger: ACGGCCGGCTACCCCTACCCACAGCAGTACGGCCACTCCTACCAAGGAGCTCCGTTCTACCAGTTCTCCTCCACCCAGCCGGGGCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS GCA 72 bp GCCAAAGGGGCCTGTTGCACAGGTACACCTGTGCTTTaGCGGGCACCAGCCCCGGCTGGGTGGAGGAGAACT +
Preference number: 6 (lower is better)
Translates to: AKGACCTGTPVL*RAPAPAGWRRT
Trigger: AGTTCTCCTCCACCCAGCCGGGGCTGGTGCCCGGCAAAGCACAGGTGTACCTGTGCAACAGGCCCCTTTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS GCA 72 bp GGGTCAGGCGGTCCATGTCACAGCCGGTGTAGATCCTaGGGGGTAGGGAGAGAGAGAGAGAGAGCCGAGGGG +
Preference number: 6 (lower is better)
Translates to: GSGGPCHSRCRS*GVGRERERAEG
Trigger: CCCCTCGGCTCTCTCTCTCTCTCTCCCTACCCCGCAGGATCTACACCGGCTGTGACATGGACCGCCTGACCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CCA 72 bp GTCTCAGGGAAAGTGAACGTCTGCACGCGGCCGGGCTaGCTAGTGTCCTCCGTGCCGTCCTCGTTCACTTCC +
Preference number: 6 (lower is better)
Translates to: VSGKVNVCTRPG*LVSSVPSSFTS
Trigger: GGAAGTGAACGAGGACGGCACGGAGGACACTAGCCAGCCCGGCCGCGTGCAGACGTTCACTTTCCCTGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000411412.5
ENST00000463544.1
CDS CCA 72 bp GGTGGCAGTTATCACTGCCCAGGTGGAGAGCGAGGTTaGCGACCTGCGTCTCCACCTGTCCGTGCATGCCAG +
Preference number: 6 (lower is better)
Translates to: GGSYHCPGGERG*RPASPPVRACQ
Trigger: CTGGCATGCACGGACAGGTGGAGACGCAGGTCGCCAACCTCGCTCTCCACCTGGGCAGTGATAACTGCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS TCA 72 bp GCTGCTAGTACCCTAGCCTTGCATGGCGGGAGAATGTaGGAGGGTGGGAGAGATGTCTGTGCCGCCCGCCTC +
Preference number: 6 (lower is better)
Translates to: AASTLALHGGRM*EGGRDVCAARL
Trigger: GAGGCGGGCGGCACAGACATCTCTCCCACCCTCTCACATTCTCCCGCCATGCAAGGCTAGGGTACTAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CCA 72 bp GCCAGTGTTGATGCGTCCCTCCCATCGCCCAGCCGCTaGCCAGGGCTCTTCCTTTTTCTTGCCTTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: ASVDASLPSPSR*PGLFLFLAFLW
Trigger: CCAGAGGAAGGCAAGAAAAAGGAAGAGCCCTGGCCAGCGGCTGGGCGATGGGAGGGACGCATCAACACTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CAA 72 bp AGGTGGCAGTTATCACTGCCCAGGTGGAGAGCGAGGTaGGCGACCTGCGTCTCCACCTGTCCGTGCATGCCA +
Preference number: 6 (lower is better)
Translates to: RWQLSLPRWRAR*ATCVSTCPCMP
Trigger: TGGCATGCACGGACAGGTGGAGACGCAGGTCGCCAACCTCGCTCTCCACCTGGGCAGTGATAACTGCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CAA 90 bp GGAGTGGGAAGGTGGCAGTTATCACTGCCCAGGTGGAGAGCGAGGTaGGCGACCTGCGTCTCCACCTGTCCGTGCATGCCAGTGTTGATG +
Preference number: 6 (lower is better)
Translates to: GVGRWQLSLPRWRAR*ATCVSTCPCMPVLM
Trigger: CATCAACACTGGCATGCACGGACAGGTGGAGACGCAGGTCGCCAACCTCGCTCTCCACCTGGGCAGTGATAACTGCCACCTTCCCACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CCA 72 bp CAACCCAAATCAGGGAGAGCGGCGGGTGAGCTGGAGTaGGAAGGTGGCAGTTATCACTGCCCAGGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: QPKSGRAAGELE*EGGSYHCPGGE
Trigger: CTCTCCACCTGGGCAGTGATAACTGCCACCTTCCCACTCCAGCTCACCCGCCGCTCTCCCTGATTTGGGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CAA 72 bp CGGCTGGGTGGAGGAGAACTGGTAGAACGGAGCTCCTaGGTAGGAGTGGCCGTACTGCTGTGGGTAGGGGTA +
Preference number: 6 (lower is better)
Translates to: RLGGGELVERSS*VGVAVLLWVGV
Trigger: TACCCCTACCCACAGCAGTACGGCCACTCCTACCAAGGAGCTCCGTTCTACCAGTTCTCCTCCACCCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS TCA 72 bp GCTCGTAAATCCCCGAGTCGCTGGAGTCGATGGACTTaGTCGAGGAGGGCGTCTCGATCCAGCTGGAATCGG +
Preference number: 6 (lower is better)
Translates to: ARKSPSRWSRWT*SRRASRSSWNR
Trigger: CCGATTCCAGCTGGATCGAGACGCCCTCCTCGATCAAGTCCATCGACTCCAGCGACTCGGGGATTTACGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000410035.1
CDS CCA 72 bp AAGTGCAACCCAAATCAGGGAGAGCGGCGGGTGAGCTaGAGTGGGAAGGTGGCAGTTATCACTGCCCAGGTG +
Preference number: 6 (lower is better)
Translates to: KCNPNQGERRVS*SGKVAVITAQV
Trigger: CACCTGGGCAGTGATAACTGCCACCTTCCCACTCCAGCTCACCCGCCGCTCTCCCTGATTTGGGTTGCACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CCA 72 bp CCGTCCTCGTTCACTTCCACCACATGCAGGCGGGGCTaGTACTTGTGCAAGGACTGTAAAACCACCATCTGC +
Preference number: 6 (lower is better)
Translates to: PSSFTSTTCRRG*YLCKDCKTTIC
Trigger: GCAGATGGTGGTTTTACAGTCCTTGCACAAGTACCAGCCCCGCCTGCATGTGGTGGAAGTGAACGAGGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389554.8
ENST00000410035.1
ENST00000411412.5
CDS GCA 72 bp GCACATTGGTGTCCGCTTTGCCGCAAGGAACCCATTTaGCTCCTTGAAACCTCCAGTGATTGGGATCCGCCA +
Preference number: 6 (lower is better)
Translates to: AHWCPLCRKEPI*LLETSSDWDPP
Trigger: TGGCGGATCCCAATCACTGGAGGTTTCAAGGAGGCAAATGGGTTCCTTGCGGCAAAGCGGACACCAATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS CCA 72 bp CCGTCCTCGTTCACTTCCACCACATGCAGGCGGGGCTaGTACTTGTGCAAGGACTGTAAAACCACCATCTGT +
Preference number: 6 (lower is better)
Translates to: PSSFTSTTCRRG*YLCKDCKTTIC
Trigger: ACAGATGGTGGTTTTACAGTCCTTGCACAAGTACCAGCCCCGCCTGCATGTGGTGGAAGTGAACGAGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CAA 72 bp AGAAGGCAGCCAGAGGAGGAGGGGCATGTGAGAGTTTaGCTGTGGCTGCTCAGGTCCGTTCTGTTTAGTGCA +
Preference number: 6 (lower is better)
Translates to: RRQPEEEGHVRV*LWLLRSVLFSA
Trigger: TGCACTAAACAGAACGGACCTGAGCAGCCACAGCAAAACTCTCACATGCCCCTCCTCCTCTGGCTGCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CCA 72 bp GAGACCCCGTCCAAGACAGGAGAGAGTTTACTTCTCTaGACGTCCCCTGGTGAGTCCTTGGAGTCAGGAAAA +
Preference number: 6 (lower is better)
Translates to: ETPSKTGESLLL*TSPGESLESGK
Trigger: TTTTCCTGACTCCAAGGACTCACCAGGGGACGTCCAGAGAAGTAAACTCTCTCCTGTCTTGGACGGGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS CCA 72 bp GAAGGAGAGCCTCAGTCTTGTCAGACCTTAATCCTTTaGGGAGGAGATTCCCTGGTGAGTGGCCAAGCAAGC +
Preference number: 6 (lower is better)
Translates to: EGEPQSCQTLIL*GGDSLVSGQAS
Trigger: GCTTGCTTGGCCACTCACCAGGGAATCTCCTCCCCAAAGGATTAAGGTCTGACAAGACTGAGGCTCTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CAA 90 bp CCTGAGCAAGATACAGACCATCAAGGGAACGACTTCCCTCTTCTCTaGCTCTCTCTCGTCAAGTGTACTGGGGTACTGAGAGAGGGGCAC +
Preference number: 6 (lower is better)
Translates to: PEQDTDHQGNDFPLL*LSLVKCTGVLREGH
Trigger: GTGCCCCTCTCTCAGTACCCCAGTACACTTGACGAGAGAGAGCAAGAGAAGAGGGAAGTCGTTCCCTTGATGGTCTGTATCTTGCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS TCA 72 bp AGAAAGGCAGTGCTCCAGCTGCATAGCTCTAGAACCTaGACACTCGCCCTCCCGTCCCTGGTTTTTAAAGTC +
Preference number: 6 (lower is better)
Translates to: RKAVLQLHSSRT*TLALPSLVFKV
Trigger: GACTTTAAAAACCAGGGACGGGAGGGCGAGTGTTCAGGTTCTAGAGCTATGCAGCTGGAGCACTGCCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS CCA 72 bp GACCTTAATCCTTTGGGGAGGAGATTCCCTGGTGAGTaGCCAAGCAAGCTCCTAGTACCCCATGAACCCTTA +
Preference number: 6 (lower is better)
Translates to: DLNPLGRRFPGE*PSKLLVPHEPL
Trigger: TAAGGGTTCATGGGGTACTAGGAGCTTGCTTGGCCACTCACCAGGGAATCTCCTCCCCAAAGGATTAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS TCA 72 bp CTTCTCTCCAGGTTGTCAGTGGTCGAGATAATGGGATaGTCGTGCAAGACAAGCTCGGATCCGCCTGAATGT +
Preference number: 6 (lower is better)
Translates to: LLSRLSVVEIMG*SCKTSSDPPEC
Trigger: ACATTCAGGCGGATCCGAGCTTGTCTTGCACGATCATCCCATTATCTCGACCACTGACAACCTGGAGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS GCA 72 bp TATAGACCCGATTTCCTTGCACATTGGTGTCCGCTTTaGCGCAAGGAACCCATTTGCCTCCTTGAAACCTCC +
Preference number: 6 (lower is better)
Translates to: YRPDFLAHWCPL*RKEPICLLETS
Trigger: GGAGGTTTCAAGGAGGCAAATGGGTTCCTTGCGGCAAAGCGGACACCAATGTGCAAGGAAATCGGGTCTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS GCA 72 bp AGACTGGCCTTCACCCGTGTTCTGGAACCCGAGGTTTaGTGCTGGAAGCCTCCAAAGTACTTAGTGTCTATT +
Preference number: 6 (lower is better)
Translates to: RLAFTRVLEPEV*CWKPPKYLVSI
Trigger: AATAGACACTAAGTACTTTGGAGGCTTCCAGCAGCAAACCTCGGGTTCCAGAACACGGGTGAAGGCCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CAA 72 bp AAGACTGGCCTTCACCCGTGTTCTGGAACCCGAGGTTaGCTGCTGGAAGCCTCCAAAGTACTTAGTGTCTAT +
Preference number: 6 (lower is better)
Translates to: KTGLHPCSGTRG*LLEASKVLSVY
Trigger: ATAGACACTAAGTACTTTGGAGGCTTCCAGCAGCAAACCTCGGGTTCCAGAACACGGGTGAAGGCCAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CAA 72 bp GTTCTGCTCATGAACTCGCCTGTGGTGGGTGCACATTaGTATTCAGTCCGTAGCCAACTTGCACAGGAAATG +
Preference number: 6 (lower is better)
Translates to: VLLMNSPVVGAH*YSVRSQLAQEM
Trigger: CATTTCCTGTGCAAGTTGGCTACGGACTGAATACAAATGTGCACCCACCACAGGCGAGTTCATGAGCAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS TCA 72 bp CTTTGCCCAGTGGGCCTTTCCTCTGCGGTCAGTTTATaGGTGAAATTTCTAAGCAAGGTACTCACTCCTCCA +
Preference number: 6 (lower is better)
Translates to: LCPVGLSSAVSL*VKFLSKVLTPP
Trigger: TGGAGGAGTGAGTACCTTGCTTAGAAATTTCACTCATAAACTGACCGCAGAGGAAAGGCCCACTGGGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS GCA 72 bp CTAAGGAGACTGTTAACAACTGCCAGAGGAGCCACATaGACTTTTAGGCAGAATTGCCCGTTTCAGACAGAC +
Preference number: 6 (lower is better)
Translates to: LRRLLTTARGAT*TFRQNCPFQTD
Trigger: GTCTGTCTGAAACGGGCAATTCTGCCTAAAAGTGCATGTGGCTCCTCTGGCAGTTGTTAACAGTCTCCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CCA 72 bp AGTATTAGTACTTGGGAAGGTCGGGCACTCCAAAATTaGGCCGACGGAGGTGTTGCCAATGAGAACAACTTT +
Preference number: 6 (lower is better)
Translates to: SISTWEGRALQN*ADGGVANENNF
Trigger: AAAGTTGTTCTCATTGGCAACACCTCCGTCGGCCCAATTTTGGAGTGCCCGACCTTCCCAAGTACTAATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CCA 72 bp CACCCTCCATCTACAAACTTGCAGTCCAGGATTTCCTaGAGAATACAAGAGGCCACAGACCTCTATCATTCC +
Preference number: 6 (lower is better)
Translates to: HPPSTNLQSRIS*RIQEATDLYHS
Trigger: GGAATGATAGAGGTCTGTGGCCTCTTGTATTCTCCAGGAAATCCTGGACTGCAAGTTTGTAGATGGAGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CAA 90 bp ATAACAGCGGTTCTGCTCATGAACTCGCCTGTGGTGGGTGCACATTaGTATTCAGTCCGTAGCCAACTTGCACAGGAAATGCTATTATAC +
Preference number: 6 (lower is better)
Translates to: ITAVLLMNSPVVGAH*YSVRSQLAQEMLLY
Trigger: GTATAATAGCATTTCCTGTGCAAGTTGGCTACGGACTGAATACAAATGTGCACCCACCACAGGCGAGTTCATGAGCAGAACCGCTGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CAA 90 bp AGAATTGCAGAACAAGCCCAGAAAGCATTCAGTTTACACCTACTGTaGGCCCCAGAGAACAGCCTTTTGATAGAAAGGAGGGAGGTAAGG +
Preference number: 6 (lower is better)
Translates to: RIAEQAQKAFSLHLL*APENSLLIERREVR
Trigger: CCTTACCTCCCTCCTTTCTATCAAAAGGCTGTTCTCTGGGGCCAACAGTAGGTGTAAACTGAATGCTTTCTGGGCTTGTTCTGCAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS GCA 72 bp GGAGTAAGATGCTCTTTGCCCAGTGGGCCTTTCCTCTaGGGTCAGTTTATGAGTGAAATTTCTAAGCAAGGT +
Preference number: 6 (lower is better)
Translates to: GVRCSLPSGPFL*GQFMSEISKQG
Trigger: ACCTTGCTTAGAAATTTCACTCATAAACTGACCGCAGAGGAAAGGCCCACTGGGCAAAGAGCATCTTACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CCA 72 bp AGAGTTTACTTCTCTGGACGTCCCCTGGTGAGTCCTTaGAGTCAGGAAAATTGTCTGTATCTGACTGATTCG +
Preference number: 6 (lower is better)
Translates to: RVYFSGRPLVSP*SQENCLYLTDS
Trigger: CGAATCAGTCAGATACAGACAATTTTCCTGACTCCAAGGACTCACCAGGGGACGTCCAGAGAAGTAAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389554.8
ENST00000463544.1
CDS CCA 72 bp AAATATCAGGAGGGATGGTTGGTATCTGCTTGGAGATaGAATAGAGGCAGTCACTTGTCTCTTTCTCCACAC +
Preference number: 6 (lower is better)
Translates to: KYQEGWLVSAWR*NRGSHLSLSPH
Trigger: GTGTGGAGAAAGAGACAAGTGACTGCCTCTATTCCATCTCCAAGCAGATACCAACCATCCCTCCTGATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CAA 72 bp ATGCAAGAAGCGGGGCGCCAGTTAGCAAAGCAAAACTaGTACTTGCAGCAAATAGGCGAATATTTGCTGGAT +
Preference number: 6 (lower is better)
Translates to: MQEAGRQLAKQN*YLQQIGEYLLD
Trigger: ATCCAGCAAATATTCGCCTATTTGCTGCAAGTACAAGTTTTGCTTTGCTAACTGGCGCCCCGCTTCTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS TCA 72 bp ACACTATCTGAACTCTTAGGCACTATGGACCCTGAGTaGGAATTGCAGAACAAGCCCAGAAAGCATTCAGTT +
Preference number: 6 (lower is better)
Translates to: TLSELLGTMDPE*ELQNKPRKHSV
Trigger: AACTGAATGCTTTCTGGGCTTGTTCTGCAATTCTCACTCAGGGTCCATAGTGCCTAAGAGTTCAGATAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS GCA 72 bp AATGAAGCAAAGAAACGTGTATCCAGTTCCATATGCTaGTTTACACTGACGAACTGGATGTCAGGGAGGAAG +
Preference number: 6 (lower is better)
Translates to: NEAKKRVSSSIC*FTLTNWMSGRK
Trigger: CTTCCTCCCTGACATCCAGTTCGTCAGTGTAAAGCAGCATATGGAACTGGATACACGTTTCTTTGCTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS GCA 72 bp GGGGCAAACCTACAGTGTACTTATCAGCCTACTCCATaGAATGGACCACTAATAATAGCTAACCTTTACGGA +
Preference number: 6 (lower is better)
Translates to: GANLQCTYQPTP*NGPLIIANLYG
Trigger: TCCGTAAAGGTTAGCTATTATTAGTGGTCCATTGCATGGAGTAGGCTGATAAGTACACTGTAGGTTTGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS GCA 72 bp ATAAATCACGGAATTATAGAGGAGCCAATCTGTCTATaGAGGGACCTGAGCAAGATACAGACCATCAAGGGA +
Preference number: 6 (lower is better)
Translates to: INHGIIEEPICL*RDLSKIQTIKG
Trigger: TCCCTTGATGGTCTGTATCTTGCTCAGGTCCCTGCATAGACAGATTGGCTCCTCTATAATTCCGTGATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CAA 72 bp GAGAAAACACGAGCGCTTGAGCCACTGACCTGCCCATaGTTATTTGAAGCTCCTTTGTTGTTCGTAAGTTTT +
Preference number: 6 (lower is better)
Translates to: EKTRALEPLTCP*LFEAPLLFVSF
Trigger: AAAACTTACGAACAACAAAGGAGCTTCAAATAACAATGGGCAGGTCAGTGGCTCAAGCGCTCGTGTTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS GCA 72 bp TTTAATGAAGCAAAGAAACGTGTATCCAGTTCCATATaGTGCTTTACACTGACGAACTGGATGTCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: FNEAKKRVSSSI*CFTLTNWMSGR
Trigger: CCTCCCTGACATCCAGTTCGTCAGTGTAAAGCAGCATATGGAACTGGATACACGTTTCTTTGCTTCATTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS GCA 72 bp AGCAAGGACTTTCATCCCACTTCTCCAACATATGTGTaGACATTAAGGCAGATTTACCTAGGGAGTAAGATG +
Preference number: 6 (lower is better)
Translates to: SKDFHPTSPTYV*TLRQIYLGSKM
Trigger: CATCTTACTCCCTAGGTAAATCTGCCTTAATGTGCACACATATGTTGGAGAAGTGGGATGAAAGTCCTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CAA 72 bp CACTCAACTCTTCTCTGTCCCCTAAAAATCTCAGGTTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAGAT +
Preference number: 6 (lower is better)
Translates to: HSTLLCPLKISG*CVCVCVCVCID
Trigger: ATCTATACACACACACACACACACACACACACACAAACCTGAGATTTTTAGGGGACAGAGAAGAGTTGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CAA 72 bp TCACTCCTCCACCCTTTTAAGACCTCCTGTGTCCATTaGATTGTTCAGGTGATATCTCTCCTTTTTCTAGAT +
Preference number: 6 (lower is better)
Translates to: SLLHPFKTSCVH*IVQVISLLFLD
Trigger: ATCTAGAAAAAGGAGAGATATCACCTGAACAATCAAATGGACACAGGAGGTCTTAAAAGGGTGGAGGAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS CAA 72 bp TGGTGGGTGCACATTTGTATTCAGTCCGTAGCCAACTaGCACAGGAAATGCTATTATACAAAACTTGGAAAT +
Preference number: 6 (lower is better)
Translates to: WWVHICIQSVAN*HRKCYYTKLGN
Trigger: ATTTCCAAGTTTTGTATAATAGCATTTCCTGTGCAAGTTGGCTACGGACTGAATACAAATGTGCACCCACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463544.1
CDS TCA 72 bp TATGAATGTGTATGTTCTTTTGATCTCCCAGAACAGTaGTGTTTGTTCATTTCAGCCATCAGTTCTGAGATG +
Preference number: 6 (lower is better)
Translates to: YECVCSFDLPEQ*CLFISAISSEM
Trigger: CATCTCAGAACTGATGGCTGAAATGAACAAACATCACTGTTCTGGGAGATCAAAAGAACATACACATTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463544.1