RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBCEL (Homo sapiens)

Ensembl gene IDs: ENSG00000154114

Ensembl transcript IDs: ENST00000284259.11, ENST00000422003.6, ENST00000524726.1, ENST00000529397.5, ENST00000531148.5, ENST00000533134.1, ENST00000533712.5, ENST00000683345.1

Found 367 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCACATCCCCCAACTTCATTCCCCACACACACCACAGATAGTTTATaGGCTAATTCTCAACTCTCCTGGTGCACGTATCCAGGACTCTAT +
Preference number: 1 (lower is better)
Translates to: PHPPTSFPTHTTDSL*ANSQLSWCTYPGLY
Trigger: ATAGAGTCCTGGATACGTGCACCAGGAGAGTTGAGAATTAGCTCATAAACTATCTGTGGTGTGTGTGGGGAATGAAGTTGGGGGATGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
3UTR TCA 90 bp AGTTCTGCCACTGTTTGGTCCAGACGAATGCTCATTTCTTCCACCTaGTCGTTAAAGTGGACTTCTACTTTTGCACTGCTCTGGGGTCTT +
Preference number: 1 (lower is better)
Translates to: SSATVWSRRMLISST*SLKWTSTFALLWGL
Trigger: AAGACCCCAGAGCAGTGCAAAAGTAGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATTCGTCTGGACCAAACAGTGGCAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
3UTR GCA 90 bp TTCCACGTAAATTTTATCTCCATCCCTAATGCCAAAGGAATGCAATaGCCGAGAGCTGTACTTCATTTCCTCTGGGCCAAAGGGTGCTTC +
Preference number: 1 (lower is better)
Translates to: FHVNFISIPNAKGMQ*PRAVLHFLWAKGCF
Trigger: GAAGCACCCTTTGGCCCAGAGGAAATGAAGTACAGCTCTCGGGCATTGCATTCCTTTGGCATTAGGGATGGAGATAAAATTTACGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
3UTR TCA 90 bp CTTGTGGAGGCTGATGGATCGAAGATTAGGAAACAACCTGGCCAATaGATCATCAGGCTCCTCAATAGCATTCAAATGATTGTTGGCCAG +
Preference number: 1 (lower is better)
Translates to: LVEADGSKIRKQPGQ*IIRLLNSIQMIVGQ
Trigger: CTGGCCAACAATCATTTGAATGCTATTGAGGAGCCTGATGATTCATTGGCCAGGTTGTTTCCTAATCTTCGATCCATCAGCCTCCACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284259.11
3UTR TCA 90 bp GGCCCTTCCTGTGAAGATTCCTTGTCACCCTGTTTAAATTCTCTATaGGACCCTTCTAAGGGGCTACAGTGTTCATGTTATCTTCACAGG +
Preference number: 1 (lower is better)
Translates to: GPSCEDSLSPCLNSL*DPSKGLQCSCYLHR
Trigger: CCTGTGAAGATAACATGAACACTGTAGCCCCTTAGAAGGGTCTCATAGAGAATTTAAACAGGGTGACAAGGAATCTTCACAGGAAGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
3UTR CCA 90 bp AATGCCAAAGGAATGCAATGCCCGAGAGCTGTACTTCATTTCCTCTaGGCCAAAGGGTGCTTCATGGTCAAAATAGTAGAGAAGCATGTT +
Preference number: 1 (lower is better)
Translates to: NAKGMQCPRAVLHFL*AKGCFMVKIVEKHV
Trigger: AACATGCTTCTCTACTATTTTGACCATGAAGCACCCTTTGGCCCAGAGGAAATGAAGTACAGCTCTCGGGCATTGCATTCCTTTGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
3UTR TCA 90 bp AACAACCTGGCCAATGAATCATCAGGCTCCTCAATAGCATTCAAATaGTTGTTGGCCAGGACGAGGGTATCCAGTGAAGGAAACATAACT +
Preference number: 1 (lower is better)
Translates to: NNLANESSGSSIAFK*LLARTRVSSEGNIT
Trigger: AGTTATGTTTCCTTCACTGGATACCCTCGTCCTGGCCAACAATCATTTGAATGCTATTGAGGAGCCTGATGATTCATTGGCCAGGTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284259.11
3UTR CCA 90 bp TTTCTTTGTCATCTTTCCTTAGAGAGGGCACATACACTGGAAATGTaGCCAATTCCGCTGGCTGAGCCAAATCAATCTGTGGTAGAAAAC +
Preference number: 1 (lower is better)
Translates to: FLCHLSLERAHTLEM*PIPLAEPNQSVVEN
Trigger: GTTTTCTACCACAGATTGATTTGGCTCAGCCAGCGGAATTGGCCACATTTCCAGTGTATGTGCCCTCTCTAAGGAAAGATGACAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
3UTR CCA 90 bp AAACTGATGGCAATCTGGCTATTACCAATTTCCTTCGCTCCTCGGTaGTATATGGCTGCAGAAGAGGAATTCCTAACAATCTCACTTCTT +
Preference number: 1 (lower is better)
Translates to: KLMAIWLLPISFAPR*YMAAEEEFLTISLL
Trigger: AAGAAGTGAGATTGTTAGGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAATAGCCAGATTGCCATCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
3UTR CCA 90 bp TTCATGTTATCTTCACAGGTTCACCCAACAGTAATGATAACCAAGTaGCAGGCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCT +
Preference number: 1 (lower is better)
Translates to: FMLSSQVHPTVMITK*QANPSEHSKKSVIS
Trigger: AGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGCCTGCCACTTGGTTATCATTACTGTTGGGTGAACCTGTGAAGATAACATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
3UTR CCA 90 bp ATCAGACTGTTCTGCCGGTGCTTCCAGAATAACTGCAAGTTTTCCTaGAGTTTTCATTCTACATCTACTCTTCGAGGTTCTAACAGAGTT +
Preference number: 1 (lower is better)
Translates to: IRLFCRCFQNNCKFS*SFHSTSTLRGSNRV
Trigger: AACTCTGTTAGAACCTCGAAGAGTAGATGTAGAATGAAAACTCCAGGAAAACTTGCAGTTATTCTGGAAGCACCGGCAGAACAGTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
3UTR CCA 90 bp ATGGCTGCAGAAGAGGAATTCCTAACAATCTCACTTCTTCCAGTTTaGGAAATGAATTTAGTTTATCAATGTCTTCCCAGGACTGCAAAC +
Preference number: 1 (lower is better)
Translates to: MAAEEEFLTISLLPV*EMNLVYQCLPRTAN
Trigger: GTTTGCAGTCCTGGGAAGACATTGATAAACTAAATTCATTTCCCAAACTGGAAGAAGTGAGATTGTTAGGAATTCCTCTTCTGCAGCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000533712.5
3UTR CCA 90 bp ATATATATATATGTATATATATTTCCATTAACTGCGGGAGACAACTaGCAAGTAAAGAGCCTGAGAGAGTCCAGTCCCTCTCCACCACTA +
Preference number: 1 (lower is better)
Translates to: IYIYVYIFPLTAGDN*QVKSLRESSPSPPL
Trigger: TAGTGGTGGAGAGGGACTGGACTCTCTCAGGCTCTTTACTTGCCAGTTGTCTCCCGCAGTTAATGGAAATATATATACATATATATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
3UTR GCA 90 bp CTGGGCCAAAGGGTGCTTCATGGTCAAAATAGTAGAGAAGCATGTTaGTTGTGGGTAATTGTACTAGAGTTTTTAACTGTTTCTTTAGTT +
Preference number: 1 (lower is better)
Translates to: LGQRVLHGQNSREAC*LWVIVLEFLTVSLV
Trigger: AACTAAAGAAACAGTTAAAAACTCTAGTACAATTACCCACAAGCAACATGCTTCTCTACTATTTTGACCATGAAGCACCCTTTGGCCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
3UTR GCA 90 bp AAGGGCTCAATTACACTTTTTCTCTCTCAAACTCATCTGCACTCATaGATACATACACAAAGCACCTACAGTTTCAATCTTCATGACACT +
Preference number: 1 (lower is better)
Translates to: KGSITLFLSQTHLHS*IHTQSTYSFNLHDT
Trigger: AGTGTCATGAAGATTGAAACTGTAGGTGCTTTGTGTATGTATGCATGAGTGCAGATGAGTTTGAGAGAGAAAAAGTGTAATTGAGCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
3UTR GCA 90 bp CAAAAGCAAAGGGCTCAATTACACTTTTTCTCTCTCAAACTCATCTaGACTCATGCATACATACACAAAGCACCTACAGTTTCAATCTTC +
Preference number: 1 (lower is better)
Translates to: QKQRAQLHFFSLKLI*THAYIHKAPTVSIF
Trigger: GAAGATTGAAACTGTAGGTGCTTTGTGTATGTATGCATGAGTGCAGATGAGTTTGAGAGAGAAAAAGTGTAATTGAGCCCTTTGCTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
3UTR CCA 90 bp CAAAGGGTGCTTCATGGTCAAAATAGTAGAGAAGCATGTTGCTTGTaGGTAATTGTACTAGAGTTTTTAACTGTTTCTTTAGTTCTGCCA +
Preference number: 1 (lower is better)
Translates to: QRVLHGQNSREACCL*VIVLEFLTVSLVLP
Trigger: TGGCAGAACTAAAGAAACAGTTAAAAACTCTAGTACAATTACCCACAAGCAACATGCTTCTCTACTATTTTGACCATGAAGCACCCTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
3UTR GCA 90 bp TCTACATCTACTCTTCGAGGTTCTAACAGAGTTATAGCTTCTTACTaGGTACCTGAGATTAGAATCAGGTTAAAAATGCTTAAAACACTT +
Preference number: 1 (lower is better)
Translates to: STSTLRGSNRVIASY*VPEIRIRLKMLKTL
Trigger: AAGTGTTTTAAGCATTTTTAACCTGATTCTAATCTCAGGTACGCAGTAAGAAGCTATAACTCTGTTAGAACCTCGAAGAGTAGATGTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
3UTR-3UTR TCA 90 bp GACACAGGTGGGAAAGTCATAAGCTCTTCCCCCACATCCCCCAACTTCATTCCCTTCTGGCCCTTCCTGTaGAGATTCCTTGTCACCCTG +
Preference number: 2 (lower is better)
Translates to: DTGGKVISSSPTSPNFIPFWPFL*RFLVTL
Trigger: CAGGGTGACAAGGAATCTTCACAGGAAGGGCCAGAA...GGGAATGAAGTTGGGGGATGTGGGGGAAGAGCTTATGACTTTCCCACCTGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
3UTR-3UTR CCA 90 bp TCTTCACAGGTTCACCCAACAGTAATGATAACCAAGTGGCAGGCAAATCCCAGTTCCTTCGCTCCTCGGTaGTATATGGCTGCAGAAGAG +
Preference number: 2 (lower is better)
Translates to: SSQVHPTVMITKWQANPSSFAPR*YMAAEE
Trigger: CTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGA...ACTGGGATTTGCCTGCCACTTGGTTATCATTACTGTTGGGTGAACCTGTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
3UTR CAA 90 bp TGGCAGGCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTaGTCATCTTTCCTTAGAGAGGGCACATACACTGGAAATGTGGCC +
Preference number: 2 (lower is better)
Translates to: WQANPSEHSKKSVIS*SSFLREGTYTGNVA
Trigger: GGCCACATTTCCAGTGTATGTGCCCTCTCTAAGGAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGCCTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
3UTR-3UTR GCA 90 bp GACACAGGTGGGAAAGTCATAAGCTCTTCCCCCACATCCCCCAACTTCATTCCCAGTAGAGAAGCATGTTaGTTGTGGGTAATTGTACTA +
Preference number: 2 (lower is better)
Translates to: DTGGKVISSSPTSPNFIPSREAC*LWVIVL
Trigger: TAGTACAATTACCCACAAGCAACATGCTTCTCTACT...GGGAATGAAGTTGGGGGATGTGGGGGAAGAGCTTATGACTTTCCCACCTGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
3UTR-3UTR CCA 90 bp TCTTCACAGGTTCACCCAACAGTAATGATAACCAAGTGGCAGGCAAATCCCAGTTGCAAACCTGACTTGTaGAGGCTGATGGATCGAAGA +
Preference number: 2 (lower is better)
Translates to: SSQVHPTVMITKWQANPSCKPDL*RLMDRR
Trigger: TCTTCGATCCATCAGCCTCCACAAGTCAGGTTTGCA...ACTGGGATTTGCCTGCCACTTGGTTATCATTACTGTTGGGTGAACCTGTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284259.11
3UTR-3UTR TCA 90 bp GCTCTTAGTGCAAGTGCTCTCTGCTCCTACCACTGCTGGTTGAGTAACATAGCTACCACAGATAGTTTATaGGCTAATTCTCAACTCTCC +
Preference number: 2 (lower is better)
Translates to: ALSASALCSYHCWLSNIATTDSL*ANSQLS
Trigger: GGAGAGTTGAGAATTAGCTCATAAACTATCTGTGGT...AGCTATGTTACTCAACCAGCAGTGGTAGGAGCAGAGAGCACTTGCACTAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
3UTR-3UTR GCA 90 bp GCTCTTAGTGCAAGTGCTCTCTGCTCCTACCACTGCTGGTTGAGTAACATAGCTTTGAAAGATAAAGTCTaGAGCAGAAGGAGAATAGGC +
Preference number: 2 (lower is better)
Translates to: ALSASALCSYHCWLSNIALKDKV*SRRRIG
Trigger: GCCTATTCTCCTTCTGCTGCAGACTTTATCTTTCAA...AGCTATGTTACTCAACCAGCAGTGGTAGGAGCAGAGAGCACTTGCACTAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
3UTR-3UTR GCA 90 bp GCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCCTTATGTCTTCCCAGGACTaGAAACCTGACTTGTGGAGG +
Preference number: 2 (lower is better)
Translates to: ANPSEHSKKSVISLSSFLMSSQD*KPDLWR
Trigger: CCTCCACAAGTCAGGTTTGCAGTCCTGGGAAGACAT...AAGGAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284259.11
3UTR-3UTR CCA 90 bp CTAAGGGGCTACAGTGTTCATGTTATCTTCACAGGTTCACCCAACAGTAATGATACTTTTGCACTGCTCTaGGGTCTTAGGTCCACTTCT +
Preference number: 2 (lower is better)
Translates to: LRGYSVHVIFTGSPNSNDTFALL*GLRSTS
Trigger: AGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGT...ATCATTACTGTTGGGTGAACCTGTGAAGATAACATGAACACTGTAGCCCCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
3UTR-3UTR TCA 90 bp CATACAAAGAGATCAGACTGTTCTGCCGGTGCTTCCAGAATAACTGCAAGTTTTAAACAACCTGGCCAATaGATCATCAGGCTCCTCAAT +
Preference number: 2 (lower is better)
Translates to: HTKRSDCSAGASRITASFKQPGQ*IIRLLN
Trigger: ATTGAGGAGCCTGATGATTCATTGGCCAGGTTGTTT...AAAACTTGCAGTTATTCTGGAAGCACCGGCAGAACAGTCTGATCTCTTTGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284259.11
3UTR-3UTR GCA 90 bp ATCTGCTGCTTTCTTACGTATTTATGGCAATGCTGGCAAAAGGCTGCAAAAACTGAGATCAGACTGTTCTaGCGGTGCTTCCAGAATAAC +
Preference number: 2 (lower is better)
Translates to: ICCFLTYLWQCWQKAAKTEIRLF*RCFQNN
Trigger: GTTATTCTGGAAGCACCGGCAGAACAGTCTGATCTC...AGTTTTTGCAGCCTTTTGCCAGCATTGCCATAAATACGTAAGAAAGCAGCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422003.6
3UTR-3UTR CCA 90 bp CATACAAAGAGATCAGACTGTTCTGCCGGTGCTTCCAGAATAACTGCAAGTTTTTGGCACTTCTTCCTGTaGAACATCCACATAGTAACG +
Preference number: 2 (lower is better)
Translates to: HTKRSDCSAGASRITASFWHFFL*NIHIVT
Trigger: CGTTACTATGTGGATGTTCCACAGGAAGAAGTGCCA...AAAACTTGCAGTTATTCTGGAAGCACCGGCAGAACAGTCTGATCTCTTTGTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
3UTR-3UTR CCA 90 bp GCAAGCTACACTCACATGTGCGTTAAGCCGCGTATCTCAAATGGTGATCAGCTCAACTGCAAGTTTTCCTaGAGTTTTCATTCTACATCT +
Preference number: 2 (lower is better)
Translates to: ASYTHMCVKPRISNGDQLNCKFS*SFHSTS
Trigger: AGATGTAGAATGAAAACTCCAGGAAAACTTGCAGTT...GAGCTGATCACCATTTGAGATACGCGGCTTAACGCACATGTGAGTGTAGCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422003.6
3UTR-3UTR CCA 90 bp AGGCTGACAAAAGCAAAGGGCTCAATTACACTTTTTCTCTCTCAAACTCATCTGTGGCACTTCTTCCTGTaGAACATCCACATAGTAACG +
Preference number: 2 (lower is better)
Translates to: RLTKAKGSITLFLSQTHLWHFFL*NIHIVT
Trigger: CGTTACTATGTGGATGTTCCACAGGAAGAAGTGCCA...CAGATGAGTTTGAGAGAGAAAAAGTGTAATTGAGCCCTTTGCTTTTGTCAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284259.11
3UTR-3UTR CCA 90 bp CATACAAAGAGATCAGACTGTTCTGCCGGTGCTTCCAGAATAACTGCAAGTTTTTTCATGATACCTGAATaGCACTTCTTCCTGTGGAAC +
Preference number: 2 (lower is better)
Translates to: HTKRSDCSAGASRITASFFMIPE*HFFLWN
Trigger: GTTCCACAGGAAGAAGTGCCATTCAGGTATCATGAA...AAAACTTGCAGTTATTCTGGAAGCACCGGCAGAACAGTCTGATCTCTTTGTATG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
3UTR-3UTR CCA 90 bp TTTGTAGGAGGGGTAGAATTATGTAACAAAGGTCAAAAGGTCAAATGCAATCAGCATACACTGGAAATGTaGCCAATTCCGCTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: FVGGVELCNKGQKVKCNQHTLEM*PIPLAE
Trigger: CTCAGCCAGCGGAATTGGCCACATTTCCAGTGTATG...CTGATTGCATTTGACCTTTTGACCTTTGTTACATAATTCTACCCCTCCTACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
3UTR-3UTR CCA 90 bp ATGATTTTGAAAGATAAAGTCTGCAGCAGAAGGAGAATAGGCCTTATTCGTCTTCATACACTGGAAATGTaGCCAATTCCGCTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: MILKDKVCSRRRIGLIRLHTLEM*PIPLAE
Trigger: CTCAGCCAGCGGAATTGGCCACATTTCCAGTGTATG...AAGACGAATAAGGCCTATTCTCCTTCTGCTGCAGACTTTATCTTTCAAAATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
3UTR-3UTR CCA 90 bp TATATATTTCCATTAACTGCGGGAGACAACTGGCAAGTAAAGAGCCTGAGAGAGAAACTCAAAGGTCCATaGCCTCTTCTCTCCTTCTTT +
Preference number: 2 (lower is better)
Translates to: YIFPLTAGDNWQVKSLREKLKGP*PLLSFF
Trigger: AAAGAAGGAGAGAAGAGGCCATGGACCTTTGAGTTT...CTCTCTCAGGCTCTTTACTTGCCAGTTGTCTCCCGCAGTTAATGGAAATATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
3UTR-3UTR TCA 90 bp TATATATTTCCATTAACTGCGGGAGACAACTGGCAAGTAAAGAGCCTGAGAGAGTGTTTAAATTCTCTATaGGACCCTTCTAAGGGGCTA +
Preference number: 2 (lower is better)
Translates to: YIFPLTAGDNWQVKSLRECLNSL*DPSKGL
Trigger: TAGCCCCTTAGAAGGGTCTCATAGAGAATTTAAACA...CTCTCTCAGGCTCTTTACTTGCCAGTTGTCTCCCGCAGTTAATGGAAATATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422003.6
3UTR-3UTR GCA 90 bp TATATATTTCCATTAACTGCGGGAGACAACTGGCAAGTAAAGAGCCTGAGAGAGCACTTACACACTTTCTaGCCCAGTTATGCTAAGTAT +
Preference number: 2 (lower is better)
Translates to: YIFPLTAGDNWQVKSLREHLHTF*PSYAKY
Trigger: ATACTTAGCATAACTGGGGCAGAAAGTGTGTAAGTG...CTCTCTCAGGCTCTTTACTTGCCAGTTGTCTCCCGCAGTTAATGGAAATATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
3UTR-3UTR TCA 90 bp TACAGTGTTCATGTTATCTTCACAGGTTCACCCAACAGTAATGATAACCAAGTGCTCATTTCTTCCACCTaGTCGTTAAAGTGGACTTCT +
Preference number: 2 (lower is better)
Translates to: YSVHVIFTGSPNSNDNQVLISST*SLKWTS
Trigger: AGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAG...CACTTGGTTATCATTACTGTTGGGTGAACCTGTGAAGATAACATGAACACTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
3UTR-3UTR TCA 90 bp ATCTGCTGCTTTCTTACGTATTTATGGCAATGCTGGCAAAAGGCTGCAAAAACTACAGTAAGAAGTCGGTaGTTTCTTTGTCATCTTTCC +
Preference number: 2 (lower is better)
Translates to: ICCFLTYLWQCWQKAAKTTVRSR*FLCHLS
Trigger: GGAAAGATGACAAAGAAATCACCGACTTCTTACTGT...AGTTTTTGCAGCCTTTTGCCAGCATTGCCATAAATACGTAAGAAAGCAGCAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422003.6
3UTR-3UTR GCA 90 bp ATGATTTTGAAAGATAAAGTCTGCAGCAGAAGGAGAATAGGCCTTATTCGTCTTCTCTGGGCCAAAGGGTaGTTCATGGTCAAAATAGTA +
Preference number: 2 (lower is better)
Translates to: MILKDKVCSRRRIGLIRLLWAKG*FMVKIV
Trigger: TACTATTTTGACCATGAAGCACCCTTTGGCCCAGAG...AAGACGAATAAGGCCTATTCTCCTTCTGCTGCAGACTTTATCTTTCAAAATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284259.11
3UTR-3UTR GCA 90 bp AGTTTTCATTCTACATCTACTCTTCGAGGTTCTAACAGAGTTATAGCTTCTTACCTAATGCCAAAGGAATaGAATGCCCGAGAGCTGTAC +
Preference number: 2 (lower is better)
Translates to: SFHSTSTLRGSNRVIASYLMPKE*NARELY
Trigger: GTACAGCTCTCGGGCATTGCATTCCTTTGGCATTAG...GTAAGAAGCTATAACTCTGTTAGAACCTCGAAGAGTAGATGTAGAATGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
3UTR-3UTR GCA 90 bp TATATATTTCCATTAACTGCGGGAGACAACTGGCAAGTAAAGAGCCTGAGAGAGGTTATAGCTTCTTACTaGGTACCTGAGATTAGAATC +
Preference number: 2 (lower is better)
Translates to: YIFPLTAGDNWQVKSLREVIASY*VPEIRI
Trigger: GATTCTAATCTCAGGTACGCAGTAAGAAGCTATAAC...CTCTCTCAGGCTCTTTACTTGCCAGTTGTCTCCCGCAGTTAATGGAAATATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
3UTR-3UTR CCA 90 bp GTCCACTTCTGCCAAAGGCTCCAACTTCCCATATTTAGTGATCAGTTCATGATAATTTCAGTCCAGTCTTaGAGGTTATTGTCTGTTATA +
Preference number: 2 (lower is better)
Translates to: VHFCQRLQLPIFSDQFMIISVQS*RLLSVI
Trigger: TATAACAGACAATAACCTCCAAGACTGGACTGAAAT...TATCATGAACTGATCACTAAATATGGGAAGTTGGAGCCTTTGGCAGAAGTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284259.11
3UTR-3UTR CCA 90 bp AGTTTTCATTCTACATCTACTCTTCGAGGTTCTAACAGAGTTATAGCTTCTTACCATTCAAATGATTGTTaGCCAGGACGAGGGTATCCA +
Preference number: 2 (lower is better)
Translates to: SFHSTSTLRGSNRVIASYHSNDC*PGRGYP
Trigger: TGGATACCCTCGTCCTGGCCAACAATCATTTGAATG...GTAAGAAGCTATAACTCTGTTAGAACCTCGAAGAGTAGATGTAGAATGAAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284259.11
3UTR-3UTR CCA 90 bp ATGTTATCTTCACAGGTTCACCCAACAGTAATGATAACCAAGTGGCAGGCAAATAAACTGATGGCAATCTaGCTATTACCAATTTCCTTC +
Preference number: 2 (lower is better)
Translates to: MLSSQVHPTVMITKWQANKLMAI*LLPISF
Trigger: GAAGGAAATTGGTAATAGCCAGATTGCCATCAGTTT...ATTTGCCTGCCACTTGGTTATCATTACTGTTGGGTGAACCTGTGAAGATAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
3UTR-3UTR CCA 90 bp GCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCCTTGAAGCATGTTGCTTGTaGGTAATTGTACTAGAGTTT +
Preference number: 2 (lower is better)
Translates to: ANPSEHSKKSVISLSSFLEACCL*VIVLEF
Trigger: AAACTCTAGTACAATTACCCACAAGCAACATGCTTC...AAGGAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
3UTR-3UTR CCA 90 bp AGTTTTCATTCTACATCTACTCTTCGAGGTTCTAACAGAGTTATAGCTTCTTACGTAATGATAACCAAGTaGCAGGCAAATCCCAGTGAA +
Preference number: 2 (lower is better)
Translates to: SFHSTSTLRGSNRVIASYVMITK*QANPSE
Trigger: TTCACTGGGATTTGCCTGCCACTTGGTTATCATTAC...GTAAGAAGCTATAACTCTGTTAGAACCTCGAAGAGTAGATGTAGAATGAAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
3UTR CAA 90 bp GCTCCCTTTACATGCAACTGTATAATAAAAGAATTATGTCCGCAGTaGATAAACACTGTGTTCTGTAATAACAGAAGAAACAGGTCTCTA +
Preference number: 2 (lower is better)
Translates to: APFTCNCIIKELCPQ*INTVFCNNRRNRSL
Trigger: TAGAGACCTGTTTCTTCTGTTATTACAGAACACAGTGTTTATCAACTGCGGACATAATTCTTTTATTATACAGTTGCATGTAAAGGGAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
3UTR CCA 72 bp GGAATGCAATGCCCGAGAGCTGTACTTCATTTCCTCTaGGCCAAAGGGTGCTTCATGGTCAAAATAGTAGAG +
Preference number: 3 (lower is better)
Translates to: GMQCPRAVLHFL*AKGCFMVKIVE
Trigger: CTCTACTATTTTGACCATGAAGCACCCTTTGGCCCAGAGGAAATGAAGTACAGCTCTCGGGCATTGCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
3UTR CCA 72 bp CATCTTTCCTTAGAGAGGGCACATACACTGGAAATGTaGCCAATTCCGCTGGCTGAGCCAAATCAATCTGTG +
Preference number: 3 (lower is better)
Translates to: HLSLERAHTLEM*PIPLAEPNQSV
Trigger: CACAGATTGATTTGGCTCAGCCAGCGGAATTGGCCACATTTCCAGTGTATGTGCCCTCTCTAAGGAAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
3UTR TCA 72 bp GCCAATGAATCATCAGGCTCCTCAATAGCATTCAAATaGTTGTTGGCCAGGACGAGGGTATCCAGTGAAGGA +
Preference number: 3 (lower is better)
Translates to: ANESSGSSIAFK*LLARTRVSSEG
Trigger: TCCTTCACTGGATACCCTCGTCCTGGCCAACAATCATTTGAATGCTATTGAGGAGCCTGATGATTCATTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284259.11
3UTR-3UTR CAA 90 bp GCTCTTAGTGCAAGTGCTCTCTGCTCCTACCACTGCTGGTTGAGTAACATAGCTGGCTATGACAGCATTTaGCCTCATAATGTCAATACT +
Preference number: 3 (lower is better)
Translates to: ALSASALCSYHCWLSNIAGYDSI*PHNVNT
Trigger: AGTATTGACATTATGAGGCAAAATGCTGTCATAGCC...AGCTATGTTACTCAACCAGCAGTGGTAGGAGCAGAGAGCACTTGCACTAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
3UTR TCA 72 bp CCAACTTCATTCCCCACACACACCACAGATAGTTTATaGGCTAATTCTCAACTCTCCTGGTGCACGTATCCA +
Preference number: 3 (lower is better)
Translates to: PTSFPTHTTDSL*ANSQLSWCTYP
Trigger: TGGATACGTGCACCAGGAGAGTTGAGAATTAGCTCATAAACTATCTGTGGTGTGTGTGGGGAATGAAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
3UTR CCA 72 bp GCAATCTGGCTATTACCAATTTCCTTCGCTCCTCGGTaGTATATGGCTGCAGAAGAGGAATTCCTAACAATC +
Preference number: 3 (lower is better)
Translates to: AIWLLPISFAPR*YMAAEEEFLTI
Trigger: GATTGTTAGGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAATAGCCAGATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
3UTR CCA 72 bp TCTTCACAGGTTCACCCAACAGTAATGATAACCAAGTaGCAGGCAAATCCCAGTGAACACAGTAAGAAGTCG +
Preference number: 3 (lower is better)
Translates to: SSQVHPTVMITK*QANPSEHSKKS
Trigger: CGACTTCTTACTGTGTTCACTGGGATTTGCCTGCCACTTGGTTATCATTACTGTTGGGTGAACCTGTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
3UTR TCA 72 bp ACTGTTTGGTCCAGACGAATGCTCATTTCTTCCACCTaGTCGTTAAAGTGGACTTCTACTTTTGCACTGCTC +
Preference number: 3 (lower is better)
Translates to: TVWSRRMLISST*SLKWTSTFALL
Trigger: GAGCAGTGCAAAAGTAGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATTCGTCTGGACCAAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
3UTR GCA 72 bp AATTTTATCTCCATCCCTAATGCCAAAGGAATGCAATaGCCGAGAGCTGTACTTCATTTCCTCTGGGCCAAA +
Preference number: 3 (lower is better)
Translates to: NFISIPNAKGMQ*PRAVLHFLWAK
Trigger: TTTGGCCCAGAGGAAATGAAGTACAGCTCTCGGGCATTGCATTCCTTTGGCATTAGGGATGGAGATAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
3UTR-3UTR CAA 90 bp GCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCCTTAGTGGACTTCTACTTTaGCACTGCTCTGGGGTCTTA +
Preference number: 3 (lower is better)
Translates to: ANPSEHSKKSVISLSSFLSGLLL*HCSGVL
Trigger: TAAGACCCCAGAGCAGTGCAAAAGTAGAAGTCCACT...AAGGAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
3UTR GCA 72 bp AGTGAGTTAGTAACATACAAAGAGATCAGACTGTTCTaGCGGTGCTTCCAGAATAACTGCAAGTTTTCCTGG +
Preference number: 3 (lower is better)
Translates to: SELVTYKEIRLF*RCFQNNCKFSW
Trigger: CCAGGAAAACTTGCAGTTATTCTGGAAGCACCGGCAGAACAGTCTGATCTCTTTGTATGTTACTAACTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
3UTR CCA 72 bp TATGTATATATATTTCCATTAACTGCGGGAGACAACTaGCAAGTAAAGAGCCTGAGAGAGTCCAGTCCCTCT +
Preference number: 3 (lower is better)
Translates to: YVYIFPLTAGDN*QVKSLRESSPS
Trigger: AGAGGGACTGGACTCTCTCAGGCTCTTTACTTGCCAGTTGTCTCCCGCAGTTAATGGAAATATATATACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
3UTR-3UTR CAA 90 bp GCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCCTTACGCTGCCATTAAGTTaGGAAACTGATGGCAATCTG +
Preference number: 3 (lower is better)
Translates to: ANPSEHSKKSVISLSSFLTLPLS*ETDGNL
Trigger: CAGATTGCCATCAGTTTCCAAACTTAATGGCAGCGT...AAGGAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
3UTR TCA 72 bp GCTGATGGATCGAAGATTAGGAAACAACCTGGCCAATaGATCATCAGGCTCCTCAATAGCATTCAAATGATT +
Preference number: 3 (lower is better)
Translates to: ADGSKIRKQPGQ*IIRLLNSIQMI
Trigger: AATCATTTGAATGCTATTGAGGAGCCTGATGATTCATTGGCCAGGTTGTTTCCTAATCTTCGATCCATCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284259.11
3UTR TCA 72 bp TCTCAACTCTCCTGGTGCACGTATCCAGGACTCTATTaGATTATTTATGAAGTCAGGCCTCAATTCCCAATA +
Preference number: 3 (lower is better)
Translates to: SQLSWCTYPGLY*IIYEVRPQFPI
Trigger: TATTGGGAATTGAGGCCTGACTTCATAAATAATTCAATAGAGTCCTGGATACGTGCACCAGGAGAGTTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
3UTR-3UTR CAA 90 bp GAGCTAATTCTCAACTCTCCTGGTGCACGTATCCAGGACTCTATTGAATTATTTTCCTGTGAAGATTCCTaGTCACCCTGTTTAAATTCT +
Preference number: 3 (lower is better)
Translates to: ELILNSPGARIQDSIELFSCEDS*SPCLNS
Trigger: AGAATTTAAACAGGGTGACAAGGAATCTTCACAGGA...AAATAATTCAATAGAGTCCTGGATACGTGCACCAGGAGAGTTGAGAATTAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
3UTR GCA 72 bp AGGGCTCAATTACACTTTTTCTCTCTCAAACTCATCTaGACTCATGCATACATACACAAAGCACCTACAGTT +
Preference number: 3 (lower is better)
Translates to: RAQLHFFSLKLI*THAYIHKAPTV
Trigger: AACTGTAGGTGCTTTGTGTATGTATGCATGAGTGCAGATGAGTTTGAGAGAGAAAAAGTGTAATTGAGCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
3UTR-3UTR CAA 90 bp GCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCCTTTATTTCAGTCCAGTCTaGGAGGTTATTGTCTGTTAT +
Preference number: 3 (lower is better)
Translates to: ANPSEHSKKSVISLSSFLYFSPV*EVIVCY
Trigger: ATAACAGACAATAACCTCCAAGACTGGACTGAAATA...AAGGAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284259.11
3UTR GCA 72 bp ACTCTTCGAGGTTCTAACAGAGTTATAGCTTCTTACTaGGTACCTGAGATTAGAATCAGGTTAAAAATGCTT +
Preference number: 3 (lower is better)
Translates to: TLRGSNRVIASY*VPEIRIRLKML
Trigger: AAGCATTTTTAACCTGATTCTAATCTCAGGTACGCAGTAAGAAGCTATAACTCTGTTAGAACCTCGAAGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
3UTR GCA 72 bp ATTACACTTTTTCTCTCTCAAACTCATCTGCACTCATaGATACATACACAAAGCACCTACAGTTTCAATCTT +
Preference number: 3 (lower is better)
Translates to: ITLFLSQTHLHS*IHTQSTYSFNL
Trigger: AAGATTGAAACTGTAGGTGCTTTGTGTATGTATGCATGAGTGCAGATGAGTTTGAGAGAGAAAAAGTGTAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
3UTR TCA 72 bp TATTTCAAAAGCAGCATCTTTTCTCAGCCACCCAAATaGATCTATAAGTACACATGCTCAAATAGCCTTTTT +
Preference number: 3 (lower is better)
Translates to: YFKSSIFSQPPK*IYKYTCSNSLF
Trigger: AAAAAGGCTATTTGAGCATGTGTACTTATAGATTCATTTGGGTGGCTGAGAAAAGATGCTGCTTTTGAAATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
3UTR CCA 72 bp AACATAACTCCTAACTTTCGTATTTCAGTCCAGTCTTaGAGGTTATTGTCTGTTATATGTAGTAGCTTAAGA +
Preference number: 3 (lower is better)
Translates to: NITPNFRISVQS*RLLSVICSSLR
Trigger: TCTTAAGCTACTACATATAACAGACAATAACCTCCAAGACTGGACTGAAATACGAAAGTTAGGAGTTATGTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284259.11
CDS-3UTR CCA 90 bp CTTCTACTTTTGCACTGCTCTGGGGTCTTAGGTCCACTTCTGCCAAAGGCTCCAGGTGTGGCTGGGACATaGACTCCCATCCCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLLLHCSGVLGPLLPKAPGVAGT*TPIPGP
Trigger: TGGCCCGGGGATGGGAGTCCATGTCCCAGCCACACC...TGGAGCCTTTGGCAGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR GCA 90 bp CTATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCAGGCGGGGGAGCTACTaGGGCGGCTCCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLPISFAPRWYMAAEEEFRRGSY*GGSSGC
Trigger: GCAGCCAGAGGAGCCGCCGCAGTAGCTCCCCCGCCT...GAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CCA 90 bp ATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCTCCTAGTCCCCCACTCTaGCCGCCGGAGCCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: ITNFLRSSVVYGCRRGIPPSPPL*PPEPSV
Trigger: GACACTGGGCTCCGGCGGCCAGAGTGGGGGACTAGG...AGGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284259.11
CDS-3UTR CCA 90 bp GCACATACACTGGAAATGTGGCCAATTCCGCTGGCTGAGCCAAATCAATCTGTGGCCCTGAGGTGTGGCTaGGACATGGACTCCCATCCC +
Preference number: 4 (lower is better)
Translates to: AHTLEMWPIPLAEPNQSVALRCG*DMDSHP
Trigger: GGGATGGGAGTCCATGTCCCAGCCACACCTCAGGGC...CACAGATTGATTTGGCTCAGCCAGCGGAATTGGCCACATTTCCAGTGTATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR GCA 90 bp CATACAAAGAGATCAGACTGTTCTGCCGGTGCTTCCAGAATAACTGCAAGTTTTAGGCGGGGGAGCTACTaGGGCGGCTCCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: HTKRSDCSAGASRITASFRRGSY*GGSSGC
Trigger: GCAGCCAGAGGAGCCGCCGCAGTAGCTCCCCCGCCT...AAAACTTGCAGTTATTCTGGAAGCACCGGCAGAACAGTCTGATCTCTTTGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp TCGTTAAAGTGGACTTCTACTTTTGCACTGCTCTGGGGTCTTAGGTCCACTTCTGGTGTGGCTGGGACATaGACTCCCATCCCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: SLKWTSTFALLWGLRSTSGVAGT*TPIPGP
Trigger: TGGCCCGGGGATGGGAGTCCATGTCCCAGCCACACC...AGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGAAGTCCACTTTAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR TCA 90 bp TGGCAATCTGGCTATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGTTCATAGGAGAGCCCTaGGGTGTGGCTGGGACATGG +
Preference number: 4 (lower is better)
Translates to: WQSGYYQFPSLLGGIWLQFIGEP*GVAGTW
Trigger: CCATGTCCCAGCCACACCTCAGGGCTCTCCTATGAA...CTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAATAGCCAGATTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR GCA 90 bp ATCTGCTGCTTTCTTACGTATTTATGGCAATGCTGGCAAAAGGCTGCAAAAACTAGGCGGGGGAGCTACTaGGGCGGCTCCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ICCFLTYLWQCWQKAAKTRRGSY*GGSSGC
Trigger: GCAGCCAGAGGAGCCGCCGCAGTAGCTCCCCCGCCT...AGTTTTTGCAGCCTTTTGCCAGCATTGCCATAAATACGTAAGAAAGCAGCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR TCA 90 bp TATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCCCCAGTGTCCTGCATTaGCCCGGAAGCAGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: YYQFPSLLGGIWLQKRNSPSVLH*PGSSFP
Trigger: GGGAAAGCTGCTTCCGGGTCAATGCAGGACACTGGG...GGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284259.11
CDS-3UTR GCA 90 bp AATTTAGTTTATCAATGTCTTCCCAGGACTGCAAACTCTGGTAACTCCTGTAGTAGGCGGGGGAGCTACTaGGGCGGCTCCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: NLVYQCLPRTANSGNSCSRRGSY*GGSSGC
Trigger: GCAGCCAGAGGAGCCGCCGCAGTAGCTCCCCCGCCT...ACTACAGGAGTTACCAGAGTTTGCAGTCCTGGGAAGACATTGATAAACTAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533712.5
CDS-3UTR CCA 90 bp CATACAAAGAGATCAGACTGTTCTGCCGGTGCTTCCAGAATAACTGCAAGTTTTGGTGTGGCTGGGACATaGACTCCCATCCCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: HTKRSDCSAGASRITASFGVAGT*TPIPGP
Trigger: TGGCCCGGGGATGGGAGTCCATGTCCCAGCCACACC...AAAACTTGCAGTTATTCTGGAAGCACCGGCAGAACAGTCTGATCTCTTTGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp TCGTTAAAGTGGACTTCTACTTTTGCACTGCTCTGGGGTCTTAGGTCCACTTCTGAGAGCCCTGAGGTGTaGCTGGGACATGGACTCCCA +
Preference number: 4 (lower is better)
Translates to: SLKWTSTFALLWGLRSTSESPEV*LGHGLP
Trigger: TGGGAGTCCATGTCCCAGCCACACCTCAGGGCTCTC...AGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGAAGTCCACTTTAACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CCA 90 bp GACACAGGTGGGAAAGTCATAAGCTCTTCCCCCACATCCCCCAACTTCATTCCCCTCCTCGGTGGTATATaGCTGCAGAAGAGGAATTCC +
Preference number: 4 (lower is better)
Translates to: DTGGKVISSSPTSPNFIPLLGGI*LQKRNS
Trigger: GGAATTCCTCTTCTGCAGCCATATACCACCGAGGAG...GGGAATGAAGTTGGGGGATGTGGGGGAAGAGCTTATGACTTTCCCACCTGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR TCA 90 bp TATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCTTCATAGGAGAGCCCTaGGGTGTGGCTGGGACATGG +
Preference number: 4 (lower is better)
Translates to: YYQFPSLLGGIWLQKRNSFIGEP*GVAGTW
Trigger: CCATGTCCCAGCCACACCTCAGGGCTCTCCTATGAA...GGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR GCA 90 bp GACACAGGTGGGAAAGTCATAAGCTCTTCCCCCACATCCCCCAACTTCATTCCCGAGATCAGACTGTTCTaGCGGTGCTTCCAGAATAAC +
Preference number: 4 (lower is better)
Translates to: DTGGKVISSSPTSPNFIPEIRLF*RCFQNN
Trigger: GTTATTCTGGAAGCACCGGCAGAACAGTCTGATCTC...GGGAATGAAGTTGGGGGATGTGGGGGAAGAGCTTATGACTTTCCCACCTGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR GCA 90 bp GACACAGGTGGGAAAGTCATAAGCTCTTCCCCCACATCCCCCAACTTCATTCCCTCTCAACTCTCCTGGTaGACGTATCCAGGACTCTAT +
Preference number: 4 (lower is better)
Translates to: DTGGKVISSSPTSPNFIPSQLSW*TYPGLY
Trigger: ATAGAGTCCTGGATACGTGCACCAGGAGAGTTGAGA...GGGAATGAAGTTGGGGGATGTGGGGGAAGAGCTTATGACTTTCCCACCTGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp CAAATTCAAAAATTGGTTTCTACTGTGGCTTTAGCAGCCGTTCACCCACATGTAGGTGTGGCTGGGACATaGACTCCCATCCCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: QIQKLVSTVALAAVHPHVGVAGT*TPIPGP
Trigger: TGGCCCGGGGATGGGAGTCCATGTCCCAGCCACACC...TACATGTGGGTGAACGGCTGCTAAAGCCACAGTAGAAACCAATTTTTGAATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR CCA 90 bp CAGGCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCGCCCTGAGGTGTGGCTaGGACATGGACTCCCATCCC +
Preference number: 4 (lower is better)
Translates to: QANPSEHSKKSVISLSSFALRCG*DMDSHP
Trigger: GGGATGGGAGTCCATGTCCCAGCCACACCTCAGGGC...GAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp GTCCAGACGAATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTTCTACTTTGCCCTGAGGTGTGGCTaGGACATGGACTCCCATCCC +
Preference number: 4 (lower is better)
Translates to: VQTNAHFFHLIVKVDFYFALRCG*DMDSHP
Trigger: GGGATGGGAGTCCATGTCCCAGCCACACCTCAGGGC...AAAGTAGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATTCGTCTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CCA 90 bp GACACAGGTGGGAAAGTCATAAGCTCTTCCCCCACATCCCCCAACTTCATTCCCTGCAAACCTGACTTGTaGAGGCTGATGGATCGAAGA +
Preference number: 4 (lower is better)
Translates to: DTGGKVISSSPTSPNFIPCKPDL*RLMDRR
Trigger: TCTTCGATCCATCAGCCTCCACAAGTCAGGTTTGCA...GGGAATGAAGTTGGGGGATGTGGGGGAAGAGCTTATGACTTTCCCACCTGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR CCA 90 bp CTTCTACTTTTGCACTGCTCTGGGGTCTTAGGTCCACTTCTGCCAAAGGCTCCACTCCTCGGTGGTATATaGCTGCAGAAGAGGAATTCC +
Preference number: 4 (lower is better)
Translates to: LLLLHCSGVLGPLLPKAPLLGGI*LQKRNS
Trigger: GGAATTCCTCTTCTGCAGCCATATACCACCGAGGAG...TGGAGCCTTTGGCAGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CCA 90 bp GACACAGGTGGGAAAGTCATAAGCTCTTCCCCCACATCCCCCAACTTCATTCCCGTACTTCATTTCCTCTaGGCCAAAGGGTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: DTGGKVISSSPTSPNFIPVLHFL*AKGCFM
Trigger: CATGAAGCACCCTTTGGCCCAGAGGAAATGAAGTAC...GGGAATGAAGTTGGGGGATGTGGGGGAAGAGCTTATGACTTTCCCACCTGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR TCA 90 bp CTTCTACTTTTGCACTGCTCTGGGGTCTTAGGTCCACTTCTGCCAAAGGCTCCAAAGCTTTGCTGTTGTTaGGGACAAGTTTGCGAACCC +
Preference number: 4 (lower is better)
Translates to: LLLLHCSGVLGPLLPKAPKLCCC*GQVCEP
Trigger: GGGTTCGCAAACTTGTCCTCAACAACAGCAAAGCTT...TGGAGCCTTTGGCAGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000533712.5
CDS-3UTR TCA 90 bp CCAATTCCGCTGGCTGAGCCAAATCAATCTGTGGTAGAAAACACCCAAAAATGGCCAGGACTGCAAACCTaGCTTGTGGAGGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: PIPLAEPNQSVVENTQKWPGLQT*LVEADG
Trigger: TCCATCAGCCTCCACAAGTCAGGTTTGCAGTCCTGG...CCATTTTTGGGTGTTTTCTACCACAGATTGATTTGGCTCAGCCAGCGGAATTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR TCA 90 bp TTAAAGTGGACTTCTACTTTTGCACTGCTCTGGGGTCTTAGGTCCACTTCTGCCTTCTGGCCCTTCCTGTaGAGATTCCTTGTCACCCTG +
Preference number: 4 (lower is better)
Translates to: LKWTSTFALLWGLRSTSAFWPFL*RFLVTL
Trigger: CAGGGTGACAAGGAATCTTCACAGGAAGGGCCAGAA...GGCAGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGAAGTCCACTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR GCA 90 bp GCAAGCTACACTCACATGTGCGTTAAGCCGCGTATCTCAAATGGTGATCAGCTCATGTCTTCCCAGGACTaGAAACCTGACTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ASYTHMCVKPRISNGDQLMSSQD*KPDLWR
Trigger: CCTCCACAAGTCAGGTTTGCAGTCCTGGGAAGACAT...GAGCTGATCACCATTTGAGATACGCGGCTTAACGCACATGTGAGTGTAGCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR GCA 90 bp TCTACTTTTGCACTGCTCTGGGGTCTTAGGTCCACTTCTGCCAAAGGCTCCAACCTTCTACTTTTGCACTaGTCTGGGGTCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: STFALLWGLRSTSAKGSNLLLLH*SGVLGP
Trigger: TGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGAAG...GTTGGAGCCTTTGGCAGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CCA 90 bp TCAGTAACAACGCTGCCATTAAGTTTGGAAACTGATGGCAATCTGGCTATTACCGAGAGCCCTGAGGTGTaGCTGGGACATGGACTCCCA +
Preference number: 4 (lower is better)
Translates to: SVTTLPLSLETDGNLAITESPEV*LGHGLP
Trigger: TGGGAGTCCATGTCCCAGCCACACCTCAGGGCTCTC...GGTAATAGCCAGATTGCCATCAGTTTCCAAACTTAATGGCAGCGTTGTTACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CCA 90 bp GACACAGGTGGGAAAGTCATAAGCTCTTCCCCCACATCCCCCAACTTCATTCCCCATTCAAATGATTGTTaGCCAGGACGAGGGTATCCA +
Preference number: 4 (lower is better)
Translates to: DTGGKVISSSPTSPNFIPHSNDC*PGRGYP
Trigger: TGGATACCCTCGTCCTGGCCAACAATCATTTGAATG...GGGAATGAAGTTGGGGGATGTGGGGGAAGAGCTTATGACTTTCCCACCTGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR CCA 90 bp GACACAGGTGGGAAAGTCATAAGCTCTTCCCCCACATCCCCCAACTTCATTCCCTGGCACTTCTTCCTGTaGAACATCCACATAGTAACG +
Preference number: 4 (lower is better)
Translates to: DTGGKVISSSPTSPNFIPWHFFL*NIHIVT
Trigger: CGTTACTATGTGGATGTTCCACAGGAAGAAGTGCCA...GGGAATGAAGTTGGGGGATGTGGGGGAAGAGCTTATGACTTTCCCACCTGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR TCA 90 bp TATATATTTCCATTAACTGCGGGAGACAACTGGCAAGTAAAGAGCCTGAGAGAGTTCATAGGAGAGCCCTaGGGTGTGGCTGGGACATGG +
Preference number: 4 (lower is better)
Translates to: YIFPLTAGDNWQVKSLREFIGEP*GVAGTW
Trigger: CCATGTCCCAGCCACACCTCAGGGCTCTCCTATGAA...CTCTCTCAGGCTCTTTACTTGCCAGTTGTCTCCCGCAGTTAATGGAAATATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR TCA 90 bp GCACATACACTGGAAATGTGGCCAATTCCGCTGGCTGAGCCAAATCAATCTGTGTCTAGTTCCGACACATaGGCGCAGAAAGCAGCAATT +
Preference number: 4 (lower is better)
Translates to: AHTLEMWPIPLAEPNQSVSSSDT*AQKAAI
Trigger: AATTGCTGCTTTCTGCGCTCATGTGTCGGAACTAGA...CACAGATTGATTTGGCTCAGCCAGCGGAATTGGCCACATTTCCAGTGTATGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR GCA 90 bp CCAATTCCGCTGGCTGAGCCAAATCAATCTGTGGTAGAAAACACCCAAAAATGGCTTTCTTTCTTAAAATaGCCTCAGCCCGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: PIPLAEPNQSVVENTQKWLSFLK*PQPGRR
Trigger: CCGCCTCCCGGGCTGAGGGCATTTTAAGAAAGAAAG...CCATTTTTGGGTGTTTTCTACCACAGATTGATTTGGCTCAGCCAGCGGAATTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR GCA 90 bp TTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCTAACAATCTCACTTCTTTCTTTCTTAAAATaGCCTCAGCCCGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: FAPRWYMAAEEEFLTISLLSFLK*PQPGRR
Trigger: CCGCCTCCCGGGCTGAGGGCATTTTAAGAAAGAAAG...AAGTGAGATTGTTAGGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000533712.5
CDS-3UTR GCA 90 bp CTTCTACTTTTGCACTGCTCTGGGGTCTTAGGTCCACTTCTGCCAAAGGCTCCATCGGTGGTATATGGCTaGAGAAGAGGAATTCCTAAC +
Preference number: 4 (lower is better)
Translates to: LLLLHCSGVLGPLLPKAPSVVYG*RRGIPN
Trigger: GTTAGGAATTCCTCTTCTGCAGCCATATACCACCGA...TGGAGCCTTTGGCAGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR GCA 90 bp GCTCTTAGTGCAAGTGCTCTCTGCTCCTACCACTGCTGGTTGAGTAACATAGCTAGCTACACTCACATGTaGGTTAAGCCGCGTATCTCA +
Preference number: 4 (lower is better)
Translates to: ALSASALCSYHCWLSNIASYTHM*VKPRIS
Trigger: TGAGATACGCGGCTTAACGCACATGTGAGTGTAGCT...AGCTATGTTACTCAACCAGCAGTGGTAGGAGCAGAGAGCACTTGCACTAAGAGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR CCA 90 bp AGGCTGACAAAAGCAAAGGGCTCAATTACACTTTTTCTCTCTCAAACTCATCTGGAGAGCCCTGAGGTGTaGCTGGGACATGGACTCCCA +
Preference number: 4 (lower is better)
Translates to: RLTKAKGSITLFLSQTHLESPEV*LGHGLP
Trigger: TGGGAGTCCATGTCCCAGCCACACCTCAGGGCTCTC...CAGATGAGTTTGAGAGAGAAAAAGTGTAATTGAGCCCTTTGCTTTTGTCAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR CCA 90 bp ATGTTATCTTCACAGGTTCACCCAACAGTAATGATAACCAAGTGGCAGGCAAATGAGAGCCCTGAGGTGTaGCTGGGACATGGACTCCCA +
Preference number: 4 (lower is better)
Translates to: MLSSQVHPTVMITKWQANESPEV*LGHGLP
Trigger: TGGGAGTCCATGTCCCAGCCACACCTCAGGGCTCTC...ATTTGCCTGCCACTTGGTTATCATTACTGTTGGGTGAACCTGTGAAGATAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp GCACATACACTGGAAATGTGGCCAATTCCGCTGGCTGAGCCAAATCAATCTGTGACTTTTGCACTGCTCTaGGGTCTTAGGTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: AHTLEMWPIPLAEPNQSVTFALL*GLRSTS
Trigger: AGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGT...CACAGATTGATTTGGCTCAGCCAGCGGAATTGGCCACATTTCCAGTGTATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp TGGCTATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAACATACACTGGAAATGTaGCCAATTCCGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: WLLPISFAPRWYMAAEEEHTLEM*PIPLAE
Trigger: CTCAGCCAGCGGAATTGGCCACATTTCCAGTGTATG...TTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAATAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR CCA 90 bp TTAAAGTGGACTTCTACTTTTGCACTGCTCTGGGGTCTTAGGTCCACTTCTGCCAGAGGGCACATACACTaGAAATGTGGCCAATTCCGC +
Preference number: 4 (lower is better)
Translates to: LKWTSTFALLWGLRSTSARGHIH*KCGQFR
Trigger: GCGGAATTGGCCACATTTCCAGTGTATGTGCCCTCT...GGCAGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGAAGTCCACTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR CCA 90 bp CGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCTAACAATCTCACTTCTAGAGGGCACATACACTaGAAATGTGGCCAATTCCGC +
Preference number: 4 (lower is better)
Translates to: RSSVVYGCRRGIPNNLTSRGHIH*KCGQFR
Trigger: GCGGAATTGGCCACATTTCCAGTGTATGTGCCCTCT...AGAAGTGAGATTGTTAGGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR CCA 90 bp TGGCAATCTGGCTATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGAATTCTCAACTCTCCTaGTGCACGTATCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: WQSGYYQFPSLLGGIWLQNSQLS*CTYPGL
Trigger: GAGTCCTGGATACGTGCACCAGGAGAGTTGAGAATT...CTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAATAGCCAGATTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR TCA 90 bp GAGCTAATTCTCAACTCTCCTGGTGCACGTATCCAGGACTCTATTGAATTATTTTTCATAGGAGAGCCCTaGGGTGTGGCTGGGACATGG +
Preference number: 4 (lower is better)
Translates to: ELILNSPGARIQDSIELFFIGEP*GVAGTW
Trigger: CCATGTCCCAGCCACACCTCAGGGCTCTCCTATGAA...AAATAATTCAATAGAGTCCTGGATACGTGCACCAGGAGAGTTGAGAATTAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR TCA 90 bp GTCCAGACGAATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTTCTACTTTCCAGGACTGCAAACCTaGCTTGTGGAGGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: VQTNAHFFHLIVKVDFYFPGLQT*LVEADG
Trigger: TCCATCAGCCTCCACAAGTCAGGTTTGCAGTCCTGG...AAAGTAGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATTCGTCTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284259.11
CDS-3UTR CCA 90 bp TTTGTAGGAGGGGTAGAATTATGTAACAAAGGTCAAAAGGTCAAATGCAATCAGGCCCTGAGGTGTGGCTaGGACATGGACTCCCATCCC +
Preference number: 4 (lower is better)
Translates to: FVGGVELCNKGQKVKCNQALRCG*DMDSHP
Trigger: GGGATGGGAGTCCATGTCCCAGCCACACCTCAGGGC...CTGATTGCATTTGACCTTTTGACCTTTGTTACATAATTCTACCCCTCCTACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR CCA 90 bp TGTTTGGTCCAGACGAATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTTCTCCTTCGCTCCTCGGTaGTATATGGCTGCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: CLVQTNAHFFHLIVKVDFSFAPR*YMAAEE
Trigger: CTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGA...GAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATTCGTCTGGACCAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CCA 90 bp CGTTCACCATCAGTAACAACGCTGCCATTAAGTTTGGAAACTGATGGCAATCTGTCCTTCGCTCCTCGGTaGTATATGGCTGCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RSPSVTTLPLSLETDGNLSFAPR*YMAAEE
Trigger: CTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGA...CAGATTGCCATCAGTTTCCAAACTTAATGGCAGCGTTGTTACTGATGGTGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CCA 90 bp CGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCTAACAATCTCACTTCTACTTTTGCACTGCTCTaGGGTCTTAGGTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: RSSVVYGCRRGIPNNLTSTFALL*GLRSTS
Trigger: AGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGT...AGAAGTGAGATTGTTAGGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CCA 90 bp GCACATACACTGGAAATGTGGCCAATTCCGCTGGCTGAGCCAAATCAATCTGTGAGTTCTGCCACTGTTTaGTCCAGACGAATGCTCATT +
Preference number: 4 (lower is better)
Translates to: AHTLEMWPIPLAEPNQSVSSATV*SRRMLI
Trigger: AATGAGCATTCGTCTGGACCAAACAGTGGCAGAACT...CACAGATTGATTTGGCTCAGCCAGCGGAATTGGCCACATTTCCAGTGTATGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp CTATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCTGTGGCCAATTCCGCTaGCTGAGCCAAATCAATCTG +
Preference number: 4 (lower is better)
Translates to: LLPISFAPRWYMAAEEEFCGQFR*LSQINL
Trigger: CAGATTGATTTGGCTCAGCCAGCGGAATTGGCCACA...GAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR CCA 90 bp CCAATTCCGCTGGCTGAGCCAAATCAATCTGTGGTAGAAAACACCCAAAAATGGAGAGGGCACATACACTaGAAATGTGGCCAATTCCGC +
Preference number: 4 (lower is better)
Translates to: PIPLAEPNQSVVENTQKWRGHIH*KCGQFR
Trigger: GCGGAATTGGCCACATTTCCAGTGTATGTGCCCTCT...CCATTTTTGGGTGTTTTCTACCACAGATTGATTTGGCTCAGCCAGCGGAATTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR TCA 90 bp TCGTTAAAGTGGACTTCTACTTTTGCACTGCTCTGGGGTCTTAGGTCCACTTCTAAGCTTTGCTGTTGTTaGGGACAAGTTTGCGAACCC +
Preference number: 4 (lower is better)
Translates to: SLKWTSTFALLWGLRSTSKLCCC*GQVCEP
Trigger: GGGTTCGCAAACTTGTCCTCAACAACAGCAAAGCTT...AGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGAAGTCCACTTTAACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000533712.5
CDS-3UTR TCA 90 bp TGGCTATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATCAGTTCATGATACCTaGATGGCACTTCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: WLLPISFAPRWYMAAEEESVHDT*MALLPV
Trigger: CACAGGAAGAAGTGCCATTCAGGTATCATGAACTGA...TTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAATAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR TCA 90 bp TCAGTAACAACGCTGCCATTAAGTTTGGAAACTGATGGCAATCTGGCTATTACCTTCTGGCCCTTCCTGTaGAGATTCCTTGTCACCCTG +
Preference number: 4 (lower is better)
Translates to: SVTTLPLSLETDGNLAITFWPFL*RFLVTL
Trigger: CAGGGTGACAAGGAATCTTCACAGGAAGGGCCAGAA...GGTAATAGCCAGATTGCCATCAGTTTCCAAACTTAATGGCAGCGTTGTTACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR GCA 90 bp CGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCTAACAATCTCACTTCTTCGGTGGTATATGGCTaGAGAAGAGGAATTCCTAAC +
Preference number: 4 (lower is better)
Translates to: RSSVVYGCRRGIPNNLTSSVVYG*RRGIPN
Trigger: GTTAGGAATTCCTCTTCTGCAGCCATATACCACCGA...AGAAGTGAGATTGTTAGGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR GCA 90 bp GGCCAAAGGGTGCTTCATGGTCAAAATAGTAGAGAAGCATGTTGCTTGTGGGTACTTCTACTTTTGCACTaGTCTGGGGTCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GQRVLHGQNSREACCLWVLLLLH*SGVLGP
Trigger: TGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGAAG...TACCCACAAGCAACATGCTTCTCTACTATTTTGACCATGAAGCACCCTTTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR GCA 90 bp GCACATACACTGGAAATGTGGCCAATTCCGCTGGCTGAGCCAAATCAATCTGTGTTTGGTCCAGACGAATaGTCATTTCTTCCACCTGAT +
Preference number: 4 (lower is better)
Translates to: AHTLEMWPIPLAEPNQSVFGPDE*SFLPPD
Trigger: ATCAGGTGGAAGAAATGAGCATTCGTCTGGACCAAA...CACAGATTGATTTGGCTCAGCCAGCGGAATTGGCCACATTTCCAGTGTATGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR GCA 90 bp TCGTTAAAGTGGACTTCTACTTTTGCACTGCTCTGGGGTCTTAGGTCCACTTCTAGACTGTTCTGCCGGTaGTTCCAGAATAACTGCAAG +
Preference number: 4 (lower is better)
Translates to: SLKWTSTFALLWGLRSTSRLFCR*FQNNCK
Trigger: CTTGCAGTTATTCTGGAAGCACCGGCAGAACAGTCT...AGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGAAGTCCACTTTAACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR GCA 90 bp CAGGCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCAGTGCAAGTGCTCTCTaGTCCTACCACTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: QANPSEHSKKSVISLSSFSASAL*SYHCWL
Trigger: CAACCAGCAGTGGTAGGAGCAGAGAGCACTTGCACT...GAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR CCA 90 bp AAACTGATGGCAATCTGGCTATTACCAATTTCCTTCGCTCCTCGGTGGTATATGCTCCTCGGTGGTATATaGCTGCAGAAGAGGAATTCC +
Preference number: 4 (lower is better)
Translates to: KLMAIWLLPISFAPRWYMLLGGI*LQKRNS
Trigger: GGAATTCCTCTTCTGCAGCCATATACCACCGAGGAG...CATATACCACCGAGGAGCGAAGGAAATTGGTAATAGCCAGATTGCCATCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CCA 90 bp CTAAGGGGCTACAGTGTTCATGTTATCTTCACAGGTTCACCCAACAGTAATGATTCCTTCGCTCCTCGGTaGTATATGGCTGCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LRGYSVHVIFTGSPNSNDSFAPR*YMAAEE
Trigger: CTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGA...ATCATTACTGTTGGGTGAACCTGTGAAGATAACATGAACACTGTAGCCCCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp CCAATTCCGCTGGCTGAGCCAAATCAATCTGTGGTAGAAAACACCCAAAAATGGACTTTTGCACTGCTCTaGGGTCTTAGGTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: PIPLAEPNQSVVENTQKWTFALL*GLRSTS
Trigger: AGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGT...CCATTTTTGGGTGTTTTCTACCACAGATTGATTTGGCTCAGCCAGCGGAATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp GACACAGGTGGGAAAGTCATAAGCTCTTCCCCCACATCCCCCAACTTCATTCCCTTTCTTACGTATTTATaGCAATGCTGGCAAAAGGCT +
Preference number: 4 (lower is better)
Translates to: DTGGKVISSSPTSPNFIPFLTYL*QCWQKA
Trigger: AGCCTTTTGCCAGCATTGCCATAAATACGTAAGAAA...GGGAATGAAGTTGGGGGATGTGGGGGAAGAGCTTATGACTTTCCCACCTGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR TCA 90 bp CTATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCAAACAACCTGGCCAATaGATCATCAGGCTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: LLPISFAPRWYMAAEEEFKQPGQ*IIRLLN
Trigger: ATTGAGGAGCCTGATGATTCATTGGCCAGGTTGTTT...GAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284259.11
CDS-3UTR TCA 90 bp GCACATACACTGGAAATGTGGCCAATTCCGCTGGCTGAGCCAAATCAATCTGTGACAGTAAGAAGTCGGTaGTTTCTTTGTCATCTTTCC +
Preference number: 4 (lower is better)
Translates to: AHTLEMWPIPLAEPNQSVTVRSR*FLCHLS
Trigger: GGAAAGATGACAAAGAAATCACCGACTTCTTACTGT...CACAGATTGATTTGGCTCAGCCAGCGGAATTGGCCACATTTCCAGTGTATGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR TCA 90 bp CAGGCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCAGGGCTTCCAATGGATaGCACAGGTGGGAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: QANPSEHSKKSVISLSSFRASNG*HRWESH
Trigger: ATGACTTTCCCACCTGTGTCATCCATTGGAAGCCCT...GAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR TCA 90 bp TCCCCACACACACCACAGATAGTTTATGAGCTAATTCTCAACTCTCCTGGTGCAGCTTCTGGGTGTTCTTaGGAGCAGTTTGTTTGCATT +
Preference number: 4 (lower is better)
Translates to: SPHTPQIVYELILNSPGAASGCS*EQFVCI
Trigger: AATGCAAACAAACTGCTCTCAAGAACACCCAGAAGC...TGCACCAGGAGAGTTGAGAATTAGCTCATAAACTATCTGTGGTGTGTGTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR GCA 90 bp AGTTTTCATTCTACATCTACTCTTCGAGGTTCTAACAGAGTTATAGCTTCTTACCGGAGCCCAGTGTCCTaGATTGACCCGGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SFHSTSTLRGSNRVIASYRSPVS*IDPEAA
Trigger: AGCTGCTTCCGGGTCAATGCAGGACACTGGGCTCCG...GTAAGAAGCTATAACTCTGTTAGAACCTCGAAGAGTAGATGTAGAATGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284259.11
CDS-3UTR GCA 90 bp GCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCCTTCTTTCTTTCTTAAAATaGCCTCAGCCCGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: ANPSEHSKKSVISLSSFLLSFLK*PQPGRR
Trigger: CCGCCTCCCGGGCTGAGGGCATTTTAAGAAAGAAAG...AAGGAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR GCA 90 bp TCCCCACACACACCACAGATAGTTTATGAGCTAATTCTCAACTCTCCTGGTGCATCGGTGGTATATGGCTaGAGAAGAGGAATTCCTAAC +
Preference number: 4 (lower is better)
Translates to: SPHTPQIVYELILNSPGASVVYG*RRGIPN
Trigger: GTTAGGAATTCCTCTTCTGCAGCCATATACCACCGA...TGCACCAGGAGAGTTGAGAATTAGCTCATAAACTATCTGTGGTGTGTGTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR GCA 90 bp CACTGTTTGGTCCAGACGAATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTCGGTGGTATATGGCTaGAGAAGAGGAATTCCTAAC +
Preference number: 4 (lower is better)
Translates to: HCLVQTNAHFFHLIVKVDSVVYG*RRGIPN
Trigger: GTTAGGAATTCCTCTTCTGCAGCCATATACCACCGA...GTCCACTTTAACGATCAGGTGGAAGAAATGAGCATTCGTCTGGACCAAACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR GCA 90 bp TGTTTGGTCCAGACGAATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTTCCTTCTACTTTTGCACTaGTCTGGGGTCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: CLVQTNAHFFHLIVKVDFLLLLH*SGVLGP
Trigger: TGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGAAG...GAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATTCGTCTGGACCAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR GCA 90 bp TCTACTTTTGCACTGCTCTGGGGTCTTAGGTCCACTTCTGCCAAAGGCTCCAACAGTAGAGAAGCATGTTaGTTGTGGGTAATTGTACTA +
Preference number: 4 (lower is better)
Translates to: STFALLWGLRSTSAKGSNSREAC*LWVIVL
Trigger: TAGTACAATTACCCACAAGCAACATGCTTCTCTACT...GTTGGAGCCTTTGGCAGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR GCA 90 bp TTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCTAACAATCTCACTTCTCTGGGCCAAAGGGTaGTTCATGGTCAAAATAGTA +
Preference number: 4 (lower is better)
Translates to: FAPRWYMAAEEEFLTISLLWAKG*FMVKIV
Trigger: TACTATTTTGACCATGAAGCACCCTTTGGCCCAGAG...AAGTGAGATTGTTAGGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR GCA 90 bp TCTACTTTTGCACTGCTCTGGGGTCTTAGGTCCACTTCTGCCAAAGGCTCCAACGTTATAGCTTCTTACTaGGTACCTGAGATTAGAATC +
Preference number: 4 (lower is better)
Translates to: STFALLWGLRSTSAKGSNVIASY*VPEIRI
Trigger: GATTCTAATCTCAGGTACGCAGTAAGAAGCTATAAC...GTTGGAGCCTTTGGCAGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR GCA 90 bp TGTTTGGTCCAGACGAATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTTCGAGATCAGACTGTTCTaGCGGTGCTTCCAGAATAAC +
Preference number: 4 (lower is better)
Translates to: CLVQTNAHFFHLIVKVDFEIRLF*RCFQNN
Trigger: GTTATTCTGGAAGCACCGGCAGAACAGTCTGATCTC...GAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATTCGTCTGGACCAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR GCA 90 bp TCGGTGGTATATGGCTGCAGAAGAGGAATTCCTAACAATCTCACTTCTTCCAGTTCTCAACTCTCCTGGTaGACGTATCCAGGACTCTAT +
Preference number: 4 (lower is better)
Translates to: SVVYGCRRGIPNNLTSSSSQLSW*TYPGLY
Trigger: ATAGAGTCCTGGATACGTGCACCAGGAGAGTTGAGA...ACTGGAAGAAGTGAGATTGTTAGGAATTCCTCTTCTGCAGCCATATACCACCGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR GCA 90 bp GCACATACACTGGAAATGTGGCCAATTCCGCTGGCTGAGCCAAATCAATCTGTGTTGAAAGATAAAGTCTaGAGCAGAAGGAGAATAGGC +
Preference number: 4 (lower is better)
Translates to: AHTLEMWPIPLAEPNQSVLKDKV*SRRRIG
Trigger: GCCTATTCTCCTTCTGCTGCAGACTTTATCTTTCAA...CACAGATTGATTTGGCTCAGCCAGCGGAATTGGCCACATTTCCAGTGTATGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR GCA 90 bp GCAAGCTACACTCACATGTGCGTTAAGCCGCGTATCTCAAATGGTGATCAGCTCACGTATTTATGGCAATaGTGGCAAAAGGCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: ASYTHMCVKPRISNGDQLTYLWQ*WQKAAK
Trigger: TTTTGCAGCCTTTTGCCAGCATTGCCATAAATACGT...GAGCTGATCACCATTTGAGATACGCGGCTTAACGCACATGTGAGTGTAGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR GCA 90 bp CGTTCACCATCAGTAACAACGCTGCCATTAAGTTTGGAAACTGATGGCAATCTGATGTCTTCCCAGGACTaGAAACCTCATGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: RSPSVTTLPLSLETDGNLMSSQD*KPHASL
Trigger: AAGACTGGCATGAGGTTTGCAGTCCTGGGAAGACAT...CAGATTGCCATCAGTTTCCAAACTTAATGGCAGCGTTGTTACTGATGGTGAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531148.5
CDS-3UTR CCA 90 bp TGTTTGGTCCAGACGAATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTTCTCCTGTAGTATCATGTaGACCGTCTCCCAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: CLVQTNAHFFHLIVKVDFSCSIM*TVSQEA
Trigger: AGCTTCTTGGGAGACGGTCCACATGATACTACAGGA...GAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATTCGTCTGGACCAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000533712.5
CDS-3UTR CCA 90 bp TATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCCATTCAAATGATTGTTaGCCAGGACGAGGGTATCCA +
Preference number: 4 (lower is better)
Translates to: YYQFPSLLGGIWLQKRNSHSNDC*PGRGYP
Trigger: TGGATACCCTCGTCCTGGCCAACAATCATTTGAATG...GGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284259.11
CDS-3UTR CCA 90 bp CCAATTCCGCTGGCTGAGCCAAATCAATCTGTGGTAGAAAACACCCAAAAATGGTGGCACTTCTTCCTGTaGAACATCCACATAGTAACG +
Preference number: 4 (lower is better)
Translates to: PIPLAEPNQSVVENTQKWWHFFL*NIHIVT
Trigger: CGTTACTATGTGGATGTTCCACAGGAAGAAGTGCCA...CCATTTTTGGGTGTTTTCTACCACAGATTGATTTGGCTCAGCCAGCGGAATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp TCCCCACACACACCACAGATAGTTTATGAGCTAATTCTCAACTCTCCTGGTGCAAGTTCTGCCACTGTTTaGTCCAGACGAATGCTCATT +
Preference number: 4 (lower is better)
Translates to: SPHTPQIVYELILNSPGASSATV*SRRMLI
Trigger: AATGAGCATTCGTCTGGACCAAACAGTGGCAGAACT...TGCACCAGGAGAGTTGAGAATTAGCTCATAAACTATCTGTGGTGTGTGTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp TATATATTTCCATTAACTGCGGGAGACAACTGGCAAGTAAAGAGCCTGAGAGAGTGTGGCCAATTCCGCTaGCTGAGCCAAATCAATCTG +
Preference number: 4 (lower is better)
Translates to: YIFPLTAGDNWQVKSLRECGQFR*LSQINL
Trigger: CAGATTGATTTGGCTCAGCCAGCGGAATTGGCCACA...CTCTCTCAGGCTCTTTACTTGCCAGTTGTCTCCCGCAGTTAATGGAAATATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR CCA 90 bp CAAAGGCTCCAACTTCCCATATTTAGTGATCAGTTCATGATACCTGAATGGCACTGTGGCCAATTCCGCTaGCTGAGCCAAATCAATCTG +
Preference number: 4 (lower is better)
Translates to: QRLQLPIFSDQFMIPEWHCGQFR*LSQINL
Trigger: CAGATTGATTTGGCTCAGCCAGCGGAATTGGCCACA...GTGCCATTCAGGTATCATGAACTGATCACTAAATATGGGAAGTTGGAGCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR CCA 90 bp TGGCTATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATGTCTATACCCAGCCTaGATCTCCATTGCTCATTTT +
Preference number: 4 (lower is better)
Translates to: WLLPISFAPRWYMAAEEECLYPA*ISIAHF
Trigger: AAAATGAGCAATGGAGATCCAGGCTGGGTATAGACA...TTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAATAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284259.11
CDS-3UTR TCA 90 bp GTCCACTTCTGCCAAAGGCTCCAACTTCCCATATTTAGTGATCAGTTCATGATATCTAGTTCCGACACATaGGCGCAGAAAGCAGCAATT +
Preference number: 4 (lower is better)
Translates to: VHFCQRLQLPIFSDQFMISSSDT*AQKAAI
Trigger: AATTGCTGCTTTCTGCGCTCATGTGTCGGAACTAGA...TATCATGAACTGATCACTAAATATGGGAAGTTGGAGCCTTTGGCAGAAGTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR TCA 90 bp ATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCTCTCATTTCTTCCACCTaGTCGTTAAAGTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: ITNFLRSSVVYGCRRGIPLISST*SLKWTS
Trigger: AGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAG...AGGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR TCA 90 bp ATCTGCTGCTTTCTTACGTATTTATGGCAATGCTGGCAAAAGGCTGCAAAAACTAGGGCTTCCAATGGATaGCACAGGTGGGAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: ICCFLTYLWQCWQKAAKTRASNG*HRWESH
Trigger: ATGACTTTCCCACCTGTGTCATCCATTGGAAGCCCT...AGTTTTTGCAGCCTTTTGCCAGCATTGCCATAAATACGTAAGAAAGCAGCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR TCA 90 bp GCACATACACTGGAAATGTGGCCAATTCCGCTGGCTGAGCCAAATCAATCTGTGCAGTTTCAATCTTCATaGCACTGTTGCCATACTTTT +
Preference number: 4 (lower is better)
Translates to: AHTLEMWPIPLAEPNQSVQFQSS*HCCHTF
Trigger: AAAAGTATGGCAACAGTGTCATGAAGATTGAAACTG...CACAGATTGATTTGGCTCAGCCAGCGGAATTGGCCACATTTCCAGTGTATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR TCA 90 bp GCACATACACTGGAAATGTGGCCAATTCCGCTGGCTGAGCCAAATCAATCTGTGTCAAGGAAGCACCTATaGAAAATAGTAGAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: AHTLEMWPIPLAEPNQSVSRKHL*KIVECS
Trigger: TGAACACTCTACTATTTTTCATAGGTGCTTCCTTGA...CACAGATTGATTTGGCTCAGCCAGCGGAATTGGCCACATTTCCAGTGTATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR GCA 90 bp TTAAAGTGGACTTCTACTTTTGCACTGCTCTGGGGTCTTAGGTCCACTTCTGCCTTCTTTTTCATCTCCTaGACAGGTTATTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: LKWTSTFALLWGLRSTSAFFFIS*TGYSTA
Trigger: AGCTGTGGAATAACCTGTGCAGGAGATGAAAAAGAA...GGCAGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGAAGTCCACTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR GCA 90 bp TATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCTTTGGTCCAGACGAATaGTCATTTCTTCCACCTGAT +
Preference number: 4 (lower is better)
Translates to: YYQFPSLLGGIWLQKRNSFGPDE*SFLPPD
Trigger: ATCAGGTGGAAGAAATGAGCATTCGTCTGGACCAAA...GGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR GCA 90 bp CATACAAAGAGATCAGACTGTTCTGCCGGTGCTTCCAGAATAACTGCAAGTTTTCTAATGCCAAAGGAATaGAATGCCCGAGAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: HTKRSDCSAGASRITASFLMPKE*NARELY
Trigger: GTACAGCTCTCGGGCATTGCATTCCTTTGGCATTAG...AAAACTTGCAGTTATTCTGGAAGCACCGGCAGAACAGTCTGATCTCTTTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR GCA 90 bp GCACATACACTGGAAATGTGGCCAATTCCGCTGGCTGAGCCAAATCAATCTGTGTGCTTCCAGAATAACTaGAAGTTTTCCTGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: AHTLEMWPIPLAEPNQSVCFQNN*KFSWSF
Trigger: AAAACTCCAGGAAAACTTGCAGTTATTCTGGAAGCA...CACAGATTGATTTGGCTCAGCCAGCGGAATTGGCCACATTTCCAGTGTATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR GCA 90 bp GTCCAGACGAATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTTCTACTTTAGACTGTTCTGCCGGTaGTTCCAGAATAACTGCAAG +
Preference number: 4 (lower is better)
Translates to: VQTNAHFFHLIVKVDFYFRLFCR*FQNNCK
Trigger: CTTGCAGTTATTCTGGAAGCACCGGCAGAACAGTCT...AAAGTAGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATTCGTCTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR GCA 90 bp TATATATTTCCATTAACTGCGGGAGACAACTGGCAAGTAAAGAGCCTGAGAGAGAGACTGTTCTGCCGGTaGTTCCAGAATAACTGCAAG +
Preference number: 4 (lower is better)
Translates to: YIFPLTAGDNWQVKSLRERLFCR*FQNNCK
Trigger: CTTGCAGTTATTCTGGAAGCACCGGCAGAACAGTCT...CTCTCTCAGGCTCTTTACTTGCCAGTTGTCTCCCGCAGTTAATGGAAATATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR GCA 90 bp TTAAAGTGGACTTCTACTTTTGCACTGCTCTGGGGTCTTAGGTCCACTTCTGCCTCTCTCAAACTCATCTaGACTCATGCATACATACAC +
Preference number: 4 (lower is better)
Translates to: LKWTSTFALLWGLRSTSASLKLI*THAYIH
Trigger: GTGTATGTATGCATGAGTGCAGATGAGTTTGAGAGA...GGCAGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGAAGTCCACTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284259.11
CDS-3UTR CCA 90 bp CTAAGGGGCTACAGTGTTCATGTTATCTTCACAGGTTCACCCAACAGTAATGATTCCTGTAGTATCATGTaGACCGTCTCCCAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LRGYSVHVIFTGSPNSNDSCSIM*TVSQEA
Trigger: AGCTTCTTGGGAGACGGTCCACATGATACTACAGGA...ATCATTACTGTTGGGTGAACCTGTGAAGATAACATGAACACTGTAGCCCCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR CCA 90 bp ATGTTATCTTCACAGGTTCACCCAACAGTAATGATAACCAAGTGGCAGGCAAATCTCCTCGGTGGTATATaGCTGCAGAAGAGGAATTCC +
Preference number: 4 (lower is better)
Translates to: MLSSQVHPTVMITKWQANLLGGI*LQKRNS
Trigger: GGAATTCCTCTTCTGCAGCCATATACCACCGAGGAG...ATTTGCCTGCCACTTGGTTATCATTACTGTTGGGTGAACCTGTGAAGATAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp TCGGTGGTATATGGCTGCAGAAGAGGAATTCCTAACAATCTCACTTCTTCCAGTTGGCACTTCTTCCTGTaGAACATCCACATAGTAACG +
Preference number: 4 (lower is better)
Translates to: SVVYGCRRGIPNNLTSSSWHFFL*NIHIVT
Trigger: CGTTACTATGTGGATGTTCCACAGGAAGAAGTGCCA...ACTGGAAGAAGTGAGATTGTTAGGAATTCCTCTTCTGCAGCCATATACCACCGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CCA 90 bp TCTTCTCGTTCACCATCAGTAACAACGCTGCCATTAAGTTTGGAAACTGATGGCAGTTCTGCCACTGTTTaGTCCAGACGAATGCTCATT +
Preference number: 4 (lower is better)
Translates to: SSRSPSVTTLPLSLETDGSSATV*SRRMLI
Trigger: AATGAGCATTCGTCTGGACCAAACAGTGGCAGAACT...GCCATCAGTTTCCAAACTTAATGGCAGCGTTGTTACTGATGGTGAACGAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CCA 90 bp TGGCAATCTGGCTATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGGAAGCATGTTGCTTGTaGGTAATTGTACTAGAGTTT +
Preference number: 4 (lower is better)
Translates to: WQSGYYQFPSLLGGIWLQEACCL*VIVLEF
Trigger: AAACTCTAGTACAATTACCCACAAGCAACATGCTTC...CTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAATAGCCAGATTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR CCA 90 bp GTCCAGACGAATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTTCTACTTTGTACTTCATTTCCTCTaGGCCAAAGGGTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: VQTNAHFFHLIVKVDFYFVLHFL*AKGCFM
Trigger: CATGAAGCACCCTTTGGCCCAGAGGAAATGAAGTAC...AAAGTAGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATTCGTCTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR CCA 90 bp CACTGTTTGGTCCAGACGAATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACGTAATGATAACCAAGTaGCAGGCAAATCCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: HCLVQTNAHFFHLIVKVDVMITK*QANPSE
Trigger: TTCACTGGGATTTGCCTGCCACTTGGTTATCATTAC...GTCCACTTTAACGATCAGGTGGAAGAAATGAGCATTCGTCTGGACCAAACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR CCA 90 bp CATACAAAGAGATCAGACTGTTCTGCCGGTGCTTCCAGAATAACTGCAAGTTTTAATTCTCAACTCTCCTaGTGCACGTATCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: HTKRSDCSAGASRITASFNSQLS*CTYPGL
Trigger: GAGTCCTGGATACGTGCACCAGGAGAGTTGAGAATT...AAAACTTGCAGTTATTCTGGAAGCACCGGCAGAACAGTCTGATCTCTTTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR TCA 90 bp AATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTTCTACTTTTGCACTGCTTCTAGTTCCGACACATaGGCGCAGAAAGCAGCAATT +
Preference number: 4 (lower is better)
Translates to: NAHFFHLIVKVDFYFCTASSSDT*AQKAAI
Trigger: AATTGCTGCTTTCTGCGCTCATGTGTCGGAACTAGA...AGCAGTGCAAAAGTAGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR TCA 90 bp AGGCTGACAAAAGCAAAGGGCTCAATTACACTTTTTCTCTCTCAAACTCATCTGTCTAGTTCCGACACATaGGCGCAGAAAGCAGCAATT +
Preference number: 4 (lower is better)
Translates to: RLTKAKGSITLFLSQTHLSSSDT*AQKAAI
Trigger: AATTGCTGCTTTCTGCGCTCATGTGTCGGAACTAGA...CAGATGAGTTTGAGAGAGAAAAAGTGTAATTGAGCCCTTTGCTTTTGTCAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR TCA 90 bp ATCTGCTGCTTTCTTACGTATTTATGGCAATGCTGGCAAAAGGCTGCAAAAACTAAGCTTTGCTGTTGTTaGGGACAAGTTTGCGAACCC +
Preference number: 4 (lower is better)
Translates to: ICCFLTYLWQCWQKAAKTKLCCC*GQVCEP
Trigger: GGGTTCGCAAACTTGTCCTCAACAACAGCAAAGCTT...AGTTTTTGCAGCCTTTTGCCAGCATTGCCATAAATACGTAAGAAAGCAGCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR TCA 90 bp TCGGTGGTATATGGCTGCAGAAGAGGAATTCCTAACAATCTCACTTCTTCCAGTCTCATTTCTTCCACCTaGTCGTTAAAGTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: SVVYGCRRGIPNNLTSSSLISST*SLKWTS
Trigger: AGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAG...ACTGGAAGAAGTGAGATTGTTAGGAATTCCTCTTCTGCAGCCATATACCACCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR TCA 90 bp TCTTCACAGGTTCACCCAACAGTAATGATAACCAAGTGGCAGGCAAATCCCAGTTGTTTAAATTCTCTATaGGACCCTTCTAAGGGGCTA +
Preference number: 4 (lower is better)
Translates to: SSQVHPTVMITKWQANPSCLNSL*DPSKGL
Trigger: TAGCCCCTTAGAAGGGTCTCATAGAGAATTTAAACA...ACTGGGATTTGCCTGCCACTTGGTTATCATTACTGTTGGGTGAACCTGTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR TCA 90 bp TCCCCACACACACCACAGATAGTTTATGAGCTAATTCTCAACTCTCCTGGTGCAAGAACTGTTCAATTATaGTATCACAAAGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SPHTPQIVYELILNSPGARTVQL*YHKVPG
Trigger: CCCTGGGACTTTGTGATATCATAATTGAACAGTTCT...TGCACCAGGAGAGTTGAGAATTAGCTCATAAACTATCTGTGGTGTGTGTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR GCA 90 bp TATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCTTCTTTTTCATCTCCTaGACAGGTTATTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: YYQFPSLLGGIWLQKRNSFFFIS*TGYSTA
Trigger: AGCTGTGGAATAACCTGTGCAGGAGATGAAAAAGAA...GGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR GCA 90 bp CAGGCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCCTCTGGGCCAAAGGGTaGTTCATGGTCAAAATAGTA +
Preference number: 4 (lower is better)
Translates to: QANPSEHSKKSVISLSSFLWAKG*FMVKIV
Trigger: TACTATTTTGACCATGAAGCACCCTTTGGCCCAGAG...GAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR GCA 90 bp TATATATTTCCATTAACTGCGGGAGACAACTGGCAAGTAAAGAGCCTGAGAGAGCTCTGGGCCAAAGGGTaGTTCATGGTCAAAATAGTA +
Preference number: 4 (lower is better)
Translates to: YIFPLTAGDNWQVKSLRELWAKG*FMVKIV
Trigger: TACTATTTTGACCATGAAGCACCCTTTGGCCCAGAG...CTCTCTCAGGCTCTTTACTTGCCAGTTGTCTCCCGCAGTTAATGGAAATATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR GCA 90 bp AATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTTCTACTTTTGCACTGCTGCCAAAGGAATGCAATaGCCGAGAGCTGTACTTCAT +
Preference number: 4 (lower is better)
Translates to: NAHFFHLIVKVDFYFCTAAKGMQ*PRAVLH
Trigger: ATGAAGTACAGCTCTCGGGCATTGCATTCCTTTGGC...AGCAGTGCAAAAGTAGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR GCA 90 bp GCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCCTTGCCAAAGGAATGCAATaGCCGAGAGCTGTACTTCAT +
Preference number: 4 (lower is better)
Translates to: ANPSEHSKKSVISLSSFLAKGMQ*PRAVLH
Trigger: ATGAAGTACAGCTCTCGGGCATTGCATTCCTTTGGC...AAGGAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR GCA 90 bp GAGCTAATTCTCAACTCTCCTGGTGCACGTATCCAGGACTCTATTGAATTATTTGCCAAAGGAATGCAATaGCCGAGAGCTGTACTTCAT +
Preference number: 4 (lower is better)
Translates to: ELILNSPGARIQDSIELFAKGMQ*PRAVLH
Trigger: ATGAAGTACAGCTCTCGGGCATTGCATTCCTTTGGC...AAATAATTCAATAGAGTCCTGGATACGTGCACCAGGAGAGTTGAGAATTAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR GCA 90 bp GCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCCTTCTAATGCCAAAGGAATaGAATGCCCGAGAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: ANPSEHSKKSVISLSSFLLMPKE*NARELY
Trigger: GTACAGCTCTCGGGCATTGCATTCCTTTGGCATTAG...AAGGAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR GCA 90 bp CGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCTAACAATCTCACTTCTGTTATAGCTTCTTACTaGGTACCTGAGATTAGAATC +
Preference number: 4 (lower is better)
Translates to: RSSVVYGCRRGIPNNLTSVIASY*VPEIRI
Trigger: GATTCTAATCTCAGGTACGCAGTAAGAAGCTATAAC...AGAAGTGAGATTGTTAGGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR GCA 90 bp CGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCTAACAATCTCACTTCTTGCTTCCAGAATAACTaGAAGTTTTCCTGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: RSSVVYGCRRGIPNNLTSCFQNN*KFSWSF
Trigger: AAAACTCCAGGAAAACTTGCAGTTATTCTGGAAGCA...AGAAGTGAGATTGTTAGGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR GCA 90 bp AATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTTCTACTTTTGCACTGCTTCTCAACTCTCCTGGTaGACGTATCCAGGACTCTAT +
Preference number: 4 (lower is better)
Translates to: NAHFFHLIVKVDFYFCTASQLSW*TYPGLY
Trigger: ATAGAGTCCTGGATACGTGCACCAGGAGAGTTGAGA...AGCAGTGCAAAAGTAGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR GCA 90 bp CCAATTCCGCTGGCTGAGCCAAATCAATCTGTGGTAGAAAACACCCAAAAATGGCACTTACACACTTTCTaGCCCAGTTATGCTAAGTAT +
Preference number: 4 (lower is better)
Translates to: PIPLAEPNQSVVENTQKWHLHTF*PSYAKY
Trigger: ATACTTAGCATAACTGGGGCAGAAAGTGTGTAAGTG...CCATTTTTGGGTGTTTTCTACCACAGATTGATTTGGCTCAGCCAGCGGAATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR GCA 90 bp CAAATTCAAAAATTGGTTTCTACTGTGGCTTTAGCAGCCGTTCACCCACATGTACTCTGCTCCTACCACTaGTGGTTGAGTAACATAGCT +
Preference number: 4 (lower is better)
Translates to: QIQKLVSTVALAAVHPHVLCSYH*WLSNIA
Trigger: AGCTATGTTACTCAACCAGCAGTGGTAGGAGCAGAG...TACATGTGGGTGAACGGCTGCTAAAGCCACAGTAGAAACCAATTTTTGAATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR CCA 90 bp ATCTGCTGCTTTCTTACGTATTTATGGCAATGCTGGCAAAAGGCTGCAAAAACTTCCTGTAGTATCATGTaGACCGTCTCCCAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: ICCFLTYLWQCWQKAAKTSCSIM*TVSQEA
Trigger: AGCTTCTTGGGAGACGGTCCACATGATACTACAGGA...AGTTTTTGCAGCCTTTTGCCAGCATTGCCATAAATACGTAAGAAAGCAGCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR CCA 90 bp TGGAGTTTTCATTCTACATCTACTCTTCGAGGTTCTAACAGAGTTATAGCTTCTTCCTTCGCTCCTCGGTaGTATATGGCTGCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: WSFHSTSTLRGSNRVIASSFAPR*YMAAEE
Trigger: CTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGA...AGAAGCTATAACTCTGTTAGAACCTCGAAGAGTAGATGTAGAATGAAAACTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp AATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCTAACAATTTCATGATACCTGAATaGCACTTCTTCCTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: NFLRSSVVYGCRRGIPNNFMIPE*HFFLWN
Trigger: GTTCCACAGGAAGAAGTGCCATTCAGGTATCATGAA...ATTGTTAGGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CCA 90 bp ATGTTATCTTCACAGGTTCACCCAACAGTAATGATAACCAAGTGGCAGGCAAATTGCTCCTACCACTGCTaGTTGAGTAACATAGCTGGA +
Preference number: 4 (lower is better)
Translates to: MLSSQVHPTVMITKWQANCSYHC*LSNIAG
Trigger: TCCAGCTATGTTACTCAACCAGCAGTGGTAGGAGCA...ATTTGCCTGCCACTTGGTTATCATTACTGTTGGGTGAACCTGTGAAGATAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR TCA 90 bp ATCTGCTGCTTTCTTACGTATTTATGGCAATGCTGGCAAAAGGCTGCAAAAACTTCAGTTCATGATACCTaGATGGCACTTCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: ICCFLTYLWQCWQKAAKTSVHDT*MALLPV
Trigger: CACAGGAAGAAGTGCCATTCAGGTATCATGAACTGA...AGTTTTTGCAGCCTTTTGCCAGCATTGCCATAAATACGTAAGAAAGCAGCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR TCA 90 bp GAGCTAATTCTCAACTCTCCTGGTGCACGTATCCAGGACTCTATTGAATTATTTTCAGTTCATGATACCTaGATGGCACTTCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: ELILNSPGARIQDSIELFSVHDT*MALLPV
Trigger: CACAGGAAGAAGTGCCATTCAGGTATCATGAACTGA...AAATAATTCAATAGAGTCCTGGATACGTGCACCAGGAGAGTTGAGAATTAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR TCA 90 bp AATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTTCTACTTTTGCACTGCTTCAGTTCATGATACCTaGATGGCACTTCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: NAHFFHLIVKVDFYFCTASVHDT*MALLPV
Trigger: CACAGGAAGAAGTGCCATTCAGGTATCATGAACTGA...AGCAGTGCAAAAGTAGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR TCA 90 bp AAACTGATGGCAATCTGGCTATTACCAATTTCCTTCGCTCCTCGGTGGTATATGTGTTTAAATTCTCTATaGGACCCTTCTAAGGGGCTA +
Preference number: 4 (lower is better)
Translates to: KLMAIWLLPISFAPRWYMCLNSL*DPSKGL
Trigger: TAGCCCCTTAGAAGGGTCTCATAGAGAATTTAAACA...CATATACCACCGAGGAGCGAAGGAAATTGGTAATAGCCAGATTGCCATCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR TCA 90 bp ATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCTCTATTGAATTATTTATaGAGTCAGGCCTCAATTCCC +
Preference number: 4 (lower is better)
Translates to: ITNFLRSSVVYGCRRGIPLLNYL*SQASIP
Trigger: GGGAATTGAGGCCTGACTTCATAAATAATTCAATAG...AGGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR TCA 90 bp TTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCTAACAATCTCACTTCAGTTTCAATCTTCATaGCACTGTTGCCATACTTTT +
Preference number: 4 (lower is better)
Translates to: FAPRWYMAAEEEFLTISLQFQSS*HCCHTF
Trigger: AAAAGTATGGCAACAGTGTCATGAAGATTGAAACTG...AAGTGAGATTGTTAGGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284259.11
CDS-3UTR TCA 90 bp AGGCTGACAAAAGCAAAGGGCTCAATTACACTTTTTCTCTCTCAAACTCATCTGGCGTATCTCAAATGGTaGTCAGCTCTTAGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: RLTKAKGSITLFLSQTHLAYLKW*SALSAS
Trigger: ACTTGCACTAAGAGCTGATCACCATTTGAGATACGC...CAGATGAGTTTGAGAGAGAAAAAGTGTAATTGAGCCCTTTGCTTTTGTCAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR GCA 90 bp AAACTGATGGCAATCTGGCTATTACCAATTTCCTTCGCTCCTCGGTGGTATATGTTCTTTTTCATCTCCTaGACAGGTTATTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: KLMAIWLLPISFAPRWYMFFFIS*TGYSTA
Trigger: AGCTGTGGAATAACCTGTGCAGGAGATGAAAAAGAA...CATATACCACCGAGGAGCGAAGGAAATTGGTAATAGCCAGATTGCCATCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR GCA 90 bp AAACTGATGGCAATCTGGCTATTACCAATTTCCTTCGCTCCTCGGTGGTATATGACATGTTCTTTCTCATaGCAGTCTTCGAGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: KLMAIWLLPISFAPRWYMTCSFS*QSSSLL
Trigger: CAACAAACTCGAAGACTGGCATGAGAAAGAACATGT...CATATACCACCGAGGAGCGAAGGAAATTGGTAATAGCCAGATTGCCATCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000533712.5
CDS-3UTR GCA 90 bp GTCCAGACGAATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTTCTACTTTTTTGGTCCAGACGAATaGTCATTTCTTCCACCTGAT +
Preference number: 4 (lower is better)
Translates to: VQTNAHFFHLIVKVDFYFFGPDE*SFLPPD
Trigger: ATCAGGTGGAAGAAATGAGCATTCGTCTGGACCAAA...AAAGTAGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATTCGTCTGGAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR GCA 90 bp CCAATTCCGCTGGCTGAGCCAAATCAATCTGTGGTAGAAAACACCCAAAAATGGTGCTTCCAGAATAACTaGAAGTTTTCCTGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: PIPLAEPNQSVVENTQKWCFQNN*KFSWSF
Trigger: AAAACTCCAGGAAAACTTGCAGTTATTCTGGAAGCA...CCATTTTTGGGTGTTTTCTACCACAGATTGATTTGGCTCAGCCAGCGGAATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR GCA 90 bp TCCCCACACACACCACAGATAGTTTATGAGCTAATTCTCAACTCTCCTGGTGCAAAGAGAATAAACATCTaGCACATGGCACAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: SPHTPQIVYELILNSPGAKRINI*HMAQEN
Trigger: ATTTTCCTGTGCCATGTGGCAGATGTTTATTCTCTT...TGCACCAGGAGAGTTGAGAATTAGCTCATAAACTATCTGTGGTGTGTGTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR CCA 90 bp ATGATACCTGAATGGCACTTCTTCCTGTGGAACATCCACATAGTAACGAATAAATGCAAACCTGACTTGTaGAGGCTGATGGATCGAAGA +
Preference number: 4 (lower is better)
Translates to: MIPEWHFFLWNIHIVTNKCKPDL*RLMDRR
Trigger: TCTTCGATCCATCAGCCTCCACAAGTCAGGTTTGCA...TTTATTCGTTACTATGTGGATGTTCCACAGGAAGAAGTGCCATTCAGGTATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284259.11
CDS-3UTR CCA 90 bp TCTTCACAGGTTCACCCAACAGTAATGATAACCAAGTGGCAGGCAAATCCCAGTAAACTGATGGCAATCTaGCTATTACCAATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSQVHPTVMITKWQANPSKLMAI*LLPISF
Trigger: GAAGGAAATTGGTAATAGCCAGATTGCCATCAGTTT...ACTGGGATTTGCCTGCCACTTGGTTATCATTACTGTTGGGTGAACCTGTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp TCCCCACACACACCACAGATAGTTTATGAGCTAATTCTCAACTCTCCTGGTGCAAAACTGATGGCAATCTaGCTATTACCAATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SPHTPQIVYELILNSPGAKLMAI*LLPISF
Trigger: GAAGGAAATTGGTAATAGCCAGATTGCCATCAGTTT...TGCACCAGGAGAGTTGAGAATTAGCTCATAAACTATCTGTGGTGTGTGTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp ATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCTAAACTGATGGCAATCTaGCTATTACCAATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ITNFLRSSVVYGCRRGIPKLMAI*LLPISF
Trigger: GAAGGAAATTGGTAATAGCCAGATTGCCATCAGTTT...AGGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CCA 90 bp AATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTTCTACTTTTGCACTGCTTGGCACTTCTTCCTGTaGAACATCCACATAGTAACG +
Preference number: 4 (lower is better)
Translates to: NAHFFHLIVKVDFYFCTAWHFFL*NIHIVT
Trigger: CGTTACTATGTGGATGTTCCACAGGAAGAAGTGCCA...AGCAGTGCAAAAGTAGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CCA 90 bp ATGATACCTGAATGGCACTTCTTCCTGTGGAACATCCACATAGTAACGAATAAAACTTTTGCACTGCTCTaGGGTCTTAGGTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: MIPEWHFFLWNIHIVTNKTFALL*GLRSTS
Trigger: AGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGT...TTTATTCGTTACTATGTGGATGTTCCACAGGAAGAAGTGCCATTCAGGTATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CCA 90 bp ATGTTATCTTCACAGGTTCACCCAACAGTAATGATAACCAAGTGGCAGGCAAATAGTTCTGCCACTGTTTaGTCCAGACGAATGCTCATT +
Preference number: 4 (lower is better)
Translates to: MLSSQVHPTVMITKWQANSSATV*SRRMLI
Trigger: AATGAGCATTCGTCTGGACCAAACAGTGGCAGAACT...ATTTGCCTGCCACTTGGTTATCATTACTGTTGGGTGAACCTGTGAAGATAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
3UTR CAA 72 bp TCTCGTTCACCATCAGTAACAACGCTGCCATTAAGTTaGGAAACTGATGGCAATCTGGCTATTACCAATTTC +
Preference number: 4 (lower is better)
Translates to: SRSPSVTTLPLS*ETDGNLAITNF
Trigger: GAAATTGGTAATAGCCAGATTGCCATCAGTTTCCAAACTTAATGGCAGCGTTGTTACTGATGGTGAACGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR TCA 90 bp TACAGTGTTCATGTTATCTTCACAGGTTCACCCAACAGTAATGATAACCAAGTGTCAATAGCATTCAAATaGTTGTTGGCCAGGACGAGG +
Preference number: 4 (lower is better)
Translates to: YSVHVIFTGSPNSNDNQVSIAFK*LLARTR
Trigger: CCTCGTCCTGGCCAACAATCATTTGAATGCTATTGA...CACTTGGTTATCATTACTGTTGGGTGAACCTGTGAAGATAACATGAACACTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR TCA 90 bp AATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTTCTACTTTTGCACTGCTCTCATTTCTTCCACCTaGTCGTTAAAGTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: NAHFFHLIVKVDFYFCTALISST*SLKWTS
Trigger: AGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAG...AGCAGTGCAAAAGTAGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR TCA 90 bp ACTGTTTCTTTAGTTCTGCCACTGTTTGGTCCAGACGAATGCTCATTTCTTCCAACAGTAAGAAGTCGGTaGTTTCTTTGTCATCTTTCC +
Preference number: 4 (lower is better)
Translates to: TVSLVLPLFGPDECSFLPTVRSR*FLCHLS
Trigger: GGAAAGATGACAAAGAAATCACCGACTTCTTACTGT...TGGAAGAAATGAGCATTCGTCTGGACCAAACAGTGGCAGAACTAAAGAAACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR TCA 90 bp TCAGTAACAACGCTGCCATTAAGTTTGGAAACTGATGGCAATCTGGCTATTACCTGTTTAAATTCTCTATaGGACCCTTCTAAGGGGCTA +
Preference number: 4 (lower is better)
Translates to: SVTTLPLSLETDGNLAITCLNSL*DPSKGL
Trigger: TAGCCCCTTAGAAGGGTCTCATAGAGAATTTAAACA...GGTAATAGCCAGATTGCCATCAGTTTCCAAACTTAATGGCAGCGTTGTTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR TCA 90 bp TCGGTGGTATATGGCTGCAGAAGAGGAATTCCTAACAATCTCACTTCTTCCAGTCTATTGAATTATTTATaGAGTCAGGCCTCAATTCCC +
Preference number: 4 (lower is better)
Translates to: SVVYGCRRGIPNNLTSSSLLNYL*SQASIP
Trigger: GGGAATTGAGGCCTGACTTCATAAATAATTCAATAG...ACTGGAAGAAGTGAGATTGTTAGGAATTCCTCTTCTGCAGCCATATACCACCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR TCA 90 bp CAAAGGCTCCAACTTCCCATATTTAGTGATCAGTTCATGATACCTGAATGGCACAGAACTGTTCAATTATaGTATCACAAAGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: QRLQLPIFSDQFMIPEWHRTVQL*YHKVPG
Trigger: CCCTGGGACTTTGTGATATCATAATTGAACAGTTCT...GTGCCATTCAGGTATCATGAACTGATCACTAAATATGGGAAGTTGGAGCCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR TCA 90 bp CAGGCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCAGAACTGTTCAATTATaGTATCACAAAGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: QANPSEHSKKSVISLSSFRTVQL*YHKVPG
Trigger: CCCTGGGACTTTGTGATATCATAATTGAACAGTTCT...GAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR GCA 90 bp CTAAGGGGCTACAGTGTTCATGTTATCTTCACAGGTTCACCCAACAGTAATGATACATGTTCTTTCTCATaGCAGTCTTCGAGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: LRGYSVHVIFTGSPNSNDTCSFS*QSSSLL
Trigger: CAACAAACTCGAAGACTGGCATGAGAAAGAACATGT...ATCATTACTGTTGGGTGAACCTGTGAAGATAACATGAACACTGTAGCCCCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284259.11
CDS-3UTR GCA 90 bp ATGATTTTGAAAGATAAAGTCTGCAGCAGAAGGAGAATAGGCCTTATTCGTCTTCTTCTACTTTTGCACTaGTCTGGGGTCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: MILKDKVCSRRRIGLIRLLLLLH*SGVLGP
Trigger: TGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGAAG...AAGACGAATAAGGCCTATTCTCCTTCTGCTGCAGACTTTATCTTTCAAAATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR GCA 90 bp CAGGCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCATTTTACTGACCTCATaGCAGTCTTCGAGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: QANPSEHSKKSVISLSSFILLTS*QSSSLL
Trigger: CAACAAACTCGAAGACTGGCATGAGGTCAGTAAAAT...GAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR CCA 90 bp GAGCTAATTCTCAACTCTCCTGGTGCACGTATCCAGGACTCTATTGAATTATTTTTCATGATACCTGAATaGCACTTCTTCCTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: ELILNSPGARIQDSIELFFMIPE*HFFLWN
Trigger: GTTCCACAGGAAGAAGTGCCATTCAGGTATCATGAA...AAATAATTCAATAGAGTCCTGGATACGTGCACCAGGAGAGTTGAGAATTAGCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp GCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCCTTTTCATGATACCTGAATaGCACTTCTTCCTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: ANPSEHSKKSVISLSSFLFMIPE*HFFLWN
Trigger: GTTCCACAGGAAGAAGTGCCATTCAGGTATCATGAA...AAGGAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp AGTTTTCATTCTACATCTACTCTTCGAGGTTCTAACAGAGTTATAGCTTCTTACCATACACTGGAAATGTaGCCAATTCCGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SFHSTSTLRGSNRVIASYHTLEM*PIPLAE
Trigger: CTCAGCCAGCGGAATTGGCCACATTTCCAGTGTATG...GTAAGAAGCTATAACTCTGTTAGAACCTCGAAGAGTAGATGTAGAATGAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp GCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCCTTGTAATGATAACCAAGTaGCAGGCAAATCCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: ANPSEHSKKSVISLSSFLVMITK*QANPSE
Trigger: TTCACTGGGATTTGCCTGCCACTTGGTTATCATTAC...AAGGAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp TCTTCACAGGTTCACCCAACAGTAATGATAACCAAGTGGCAGGCAAATCCCAGTAACTGCAAGTTTTCCTaGAGTTTTCATTCTACATCT +
Preference number: 4 (lower is better)
Translates to: SSQVHPTVMITKWQANPSNCKFS*SFHSTS
Trigger: AGATGTAGAATGAAAACTCCAGGAAAACTTGCAGTT...ACTGGGATTTGCCTGCCACTTGGTTATCATTACTGTTGGGTGAACCTGTGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp AGGCTGACAAAAGCAAAGGGCTCAATTACACTTTTTCTCTCTCAAACTCATCTGTGTCTATACCCAGCCTaGATCTCCATTGCTCATTTT +
Preference number: 4 (lower is better)
Translates to: RLTKAKGSITLFLSQTHLCLYPA*ISIAHF
Trigger: AAAATGAGCAATGGAGATCCAGGCTGGGTATAGACA...CAGATGAGTTTGAGAGAGAAAAAGTGTAATTGAGCCCTTTGCTTTTGTCAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR CCA 90 bp GAGCTAATTCTCAACTCTCCTGGTGCACGTATCCAGGACTCTATTGAATTATTTAAACTCAAAGGTCCATaGCCTCTTCTCTCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: ELILNSPGARIQDSIELFKLKGP*PLLSFF
Trigger: AAAGAAGGAGAGAAGAGGCCATGGACCTTTGAGTTT...AAATAATTCAATAGAGTCCTGGATACGTGCACCAGGAGAGTTGAGAATTAGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR CCA 90 bp AGTTTTCATTCTACATCTACTCTTCGAGGTTCTAACAGAGTTATAGCTTCTTACACTGCGGGAGACAACTaGCAAGTAAAGAGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SFHSTSTLRGSNRVIASYTAGDN*QVKSLR
Trigger: TCTCAGGCTCTTTACTTGCCAGTTGTCTCCCGCAGT...GTAAGAAGCTATAACTCTGTTAGAACCTCGAAGAGTAGATGTAGAATGAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR TCA 90 bp TGGAGTTTTCATTCTACATCTACTCTTCGAGGTTCTAACAGAGTTATAGCTTCTTCAATAGCATTCAAATaGTTGTTGGCCAGGACGAGG +
Preference number: 4 (lower is better)
Translates to: WSFHSTSTLRGSNRVIASSIAFK*LLARTR
Trigger: CCTCGTCCTGGCCAACAATCATTTGAATGCTATTGA...AGAAGCTATAACTCTGTTAGAACCTCGAAGAGTAGATGTAGAATGAAAACTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR TCA 90 bp TTTGTAGGAGGGGTAGAATTATGTAACAAAGGTCAAAAGGTCAAATGCAATCAGAAACAACCTGGCCAATaGATCATCAGGCTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: FVGGVELCNKGQKVKCNQKQPGQ*IIRLLN
Trigger: ATTGAGGAGCCTGATGATTCATTGGCCAGGTTGTTT...CTGATTGCATTTGACCTTTTGACCTTTGTTACATAATTCTACCCCTCCTACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR TCA 90 bp ACTGTTTCTTTAGTTCTGCCACTGTTTGGTCCAGACGAATGCTCATTTCTTCCAATTAAGTTTGGAAACTaGTGGCAATCTGGCTATTAC +
Preference number: 4 (lower is better)
Translates to: TVSLVLPLFGPDECSFLPIKFGN*WQSGYY
Trigger: GTAATAGCCAGATTGCCATCAGTTTCCAAACTTAAT...TGGAAGAAATGAGCATTCGTCTGGACCAAACAGTGGCAGAACTAAAGAAACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR TCA 90 bp TCAGTAACAACGCTGCCATTAAGTTTGGAAACTGATGGCAATCTGGCTATTACCATTAAGTTTGGAAACTaGTGGCAATCTGGCTATTAC +
Preference number: 4 (lower is better)
Translates to: SVTTLPLSLETDGNLAITIKFGN*WQSGYY
Trigger: GTAATAGCCAGATTGCCATCAGTTTCCAAACTTAAT...GGTAATAGCCAGATTGCCATCAGTTTCCAAACTTAATGGCAGCGTTGTTACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR TCA 90 bp GCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCCTTACAGTAAGAAGTCGGTaGTTTCTTTGTCATCTTTCC +
Preference number: 4 (lower is better)
Translates to: ANPSEHSKKSVISLSSFLTVRSR*FLCHLS
Trigger: GGAAAGATGACAAAGAAATCACCGACTTCTTACTGT...AAGGAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR TCA 90 bp AACACATCTGGTAACACAGATAGCTTCTGGGTGTTCTTGAGAGCAGTTTGTTTGCTATTGAATTATTTATaGAGTCAGGCCTCAATTCCC +
Preference number: 4 (lower is better)
Translates to: NTSGNTDSFWVFLRAVCLLLNYL*SQASIP
Trigger: GGGAATTGAGGCCTGACTTCATAAATAATTCAATAG...CAAACAAACTGCTCTCAAGAACACCCAGAAGCTATCTGTGTTACCAGATGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR TCA 90 bp GCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCCTTACCACAGATAGTTTATaGGCTAATTCTCAACTCTCC +
Preference number: 4 (lower is better)
Translates to: ANPSEHSKKSVISLSSFLTTDSL*ANSQLS
Trigger: GGAGAGTTGAGAATTAGCTCATAAACTATCTGTGGT...AAGGAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR TCA 90 bp AATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTTCTACTTTTGCACTGCTACCACAGATAGTTTATaGGCTAATTCTCAACTCTCC +
Preference number: 4 (lower is better)
Translates to: NAHFFHLIVKVDFYFCTATTDSL*ANSQLS
Trigger: GGAGAGTTGAGAATTAGCTCATAAACTATCTGTGGT...AGCAGTGCAAAAGTAGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR GCA 90 bp CTAAGGGGCTACAGTGTTCATGTTATCTTCACAGGTTCACCCAACAGTAATGATAGTAGAGAAGCATGTTaGTTGTGGGTAATTGTACTA +
Preference number: 4 (lower is better)
Translates to: LRGYSVHVIFTGSPNSNDSREAC*LWVIVL
Trigger: TAGTACAATTACCCACAAGCAACATGCTTCTCTACT...ATCATTACTGTTGGGTGAACCTGTGAAGATAACATGAACACTGTAGCCCCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR GCA 90 bp AACACATCTGGTAACACAGATAGCTTCTGGGTGTTCTTGAGAGCAGTTTGTTTGGTTATAGCTTCTTACTaGGTACCTGAGATTAGAATC +
Preference number: 4 (lower is better)
Translates to: NTSGNTDSFWVFLRAVCLVIASY*VPEIRI
Trigger: GATTCTAATCTCAGGTACGCAGTAAGAAGCTATAAC...CAAACAAACTGCTCTCAAGAACACCCAGAAGCTATCTGTGTTACCAGATGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR GCA 90 bp AGTTTTCATTCTACATCTACTCTTCGAGGTTCTAACAGAGTTATAGCTTCTTACGAGATCAGACTGTTCTaGCGGTGCTTCCAGAATAAC +
Preference number: 4 (lower is better)
Translates to: SFHSTSTLRGSNRVIASYEIRLF*RCFQNN
Trigger: GTTATTCTGGAAGCACCGGCAGAACAGTCTGATCTC...GTAAGAAGCTATAACTCTGTTAGAACCTCGAAGAGTAGATGTAGAATGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR GCA 90 bp CAGGCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCAAGAGAATAAACATCTaGCACATGGCACAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: QANPSEHSKKSVISLSSFKRINI*HMAQEN
Trigger: ATTTTCCTGTGCCATGTGGCAGATGTTTATTCTCTT...GAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR GCA 90 bp CAAATTCAAAAATTGGTTTCTACTGTGGCTTTAGCAGCCGTTCACCCACATGTATTGAAAGATAAAGTCTaGAGCAGAAGGAGAATAGGC +
Preference number: 4 (lower is better)
Translates to: QIQKLVSTVALAAVHPHVLKDKV*SRRRIG
Trigger: GCCTATTCTCCTTCTGCTGCAGACTTTATCTTTCAA...TACATGTGGGTGAACGGCTGCTAAAGCCACAGTAGAAACCAATTTTTGAATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR GCA 90 bp CAAATTCAAAAATTGGTTTCTACTGTGGCTTTAGCAGCCGTTCACCCACATGTATCTCTCAAACTCATCTaGACTCATGCATACATACAC +
Preference number: 4 (lower is better)
Translates to: QIQKLVSTVALAAVHPHVSLKLI*THAYIH
Trigger: GTGTATGTATGCATGAGTGCAGATGAGTTTGAGAGA...TACATGTGGGTGAACGGCTGCTAAAGCCACAGTAGAAACCAATTTTTGAATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR GCA 90 bp CTAAGGGGCTACAGTGTTCATGTTATCTTCACAGGTTCACCCAACAGTAATGATGGGGCTTATACTATCTaGTGCTTTCTTACGTATTTA +
Preference number: 4 (lower is better)
Translates to: LRGYSVHVIFTGSPNSNDGAYTI*CFLTYL
Trigger: TAAATACGTAAGAAAGCAGCAGATAGTATAAGCCCC...ATCATTACTGTTGGGTGAACCTGTGAAGATAACATGAACACTGTAGCCCCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR GCA 90 bp ATCTGCTGCTTTCTTACGTATTTATGGCAATGCTGGCAAAAGGCTGCAAAAACTTATATTTCCATTAACTaGGGGAGACAACTGGCAAGT +
Preference number: 4 (lower is better)
Translates to: ICCFLTYLWQCWQKAAKTYISIN*GRQLAS
Trigger: ACTTGCCAGTTGTCTCCCGCAGTTAATGGAAATATA...AGTTTTTGCAGCCTTTTGCCAGCATTGCCATAAATACGTAAGAAAGCAGCAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR CCA 90 bp ATGATACCTGAATGGCACTTCTTCCTGTGGAACATCCACATAGTAACGAATAAATTCATGATACCTGAATaGCACTTCTTCCTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: MIPEWHFFLWNIHIVTNKFMIPE*HFFLWN
Trigger: GTTCCACAGGAAGAAGTGCCATTCAGGTATCATGAA...TTTATTCGTTACTATGTGGATGTTCCACAGGAAGAAGTGCCATTCAGGTATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CCA 90 bp AGTTTTCATTCTACATCTACTCTTCGAGGTTCTAACAGAGTTATAGCTTCTTACGTACTTCATTTCCTCTaGGCCAAAGGGTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: SFHSTSTLRGSNRVIASYVLHFL*AKGCFM
Trigger: CATGAAGCACCCTTTGGCCCAGAGGAAATGAAGTAC...GTAAGAAGCTATAACTCTGTTAGAACCTCGAAGAGTAGATGTAGAATGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp AGTTTTCATTCTACATCTACTCTTCGAGGTTCTAACAGAGTTATAGCTTCTTACAATTCTCAACTCTCCTaGTGCACGTATCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: SFHSTSTLRGSNRVIASYNSQLS*CTYPGL
Trigger: GAGTCCTGGATACGTGCACCAGGAGAGTTGAGAATT...GTAAGAAGCTATAACTCTGTTAGAACCTCGAAGAGTAGATGTAGAATGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp CTAAGGGGCTACAGTGTTCATGTTATCTTCACAGGTTCACCCAACAGTAATGATTATTTATGGCAATGCTaGCAAAAGGCTGCAAAAACT +
Preference number: 4 (lower is better)
Translates to: LRGYSVHVIFTGSPNSNDYLWQC*QKAAKT
Trigger: AGTTTTTGCAGCCTTTTGCCAGCATTGCCATAAATA...ATCATTACTGTTGGGTGAACCTGTGAAGATAACATGAACACTGTAGCCCCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR CCA 90 bp TACAGTGTTCATGTTATCTTCACAGGTTCACCCAACAGTAATGATAACCAAGTGAACACAGATAGCTTCTaGGTGTTCTTGAGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: YSVHVIFTGSPNSNDNQVNTDSF*VFLRAV
Trigger: AACTGCTCTCAAGAACACCCAGAAGCTATCTGTGTT...CACTTGGTTATCATTACTGTTGGGTGAACCTGTGAAGATAACATGAACACTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR TCA 90 bp AGGCTGACAAAAGCAAAGGGCTCAATTACACTTTTTCTCTCTCAAACTCATCTGATTAAGTTTGGAAACTaGTGGCAATCTGGCTATTAC +
Preference number: 4 (lower is better)
Translates to: RLTKAKGSITLFLSQTHLIKFGN*WQSGYY
Trigger: GTAATAGCCAGATTGCCATCAGTTTCCAAACTTAAT...CAGATGAGTTTGAGAGAGAAAAAGTGTAATTGAGCCCTTTGCTTTTGTCAGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR TCA 90 bp ATGATTTTGAAAGATAAAGTCTGCAGCAGAAGGAGAATAGGCCTTATTCGTCTTTCTCAGCCACCCAAATaGATCTATAAGTACACATGC +
Preference number: 4 (lower is better)
Translates to: MILKDKVCSRRRIGLIRLSQPPK*IYKYTC
Trigger: GCATGTGTACTTATAGATTCATTTGGGTGGCTGAGA...AAGACGAATAAGGCCTATTCTCCTTCTGCTGCAGACTTTATCTTTCAAAATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR TCA 90 bp TTTGTAGGAGGGGTAGAATTATGTAACAAAGGTCAAAAGGTCAAATGCAATCAGTCTCAGCCACCCAAATaGATCTATAAGTACACATGC +
Preference number: 4 (lower is better)
Translates to: FVGGVELCNKGQKVKCNQSQPPK*IYKYTC
Trigger: GCATGTGTACTTATAGATTCATTTGGGTGGCTGAGA...CTGATTGCATTTGACCTTTTGACCTTTGTTACATAATTCTACCCCTCCTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR GCA 90 bp TACAGTGTTCATGTTATCTTCACAGGTTCACCCAACAGTAATGATAACCAAGTGTTCTTTTTCATCTCCTaGACAGGTTATTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: YSVHVIFTGSPNSNDNQVFFFIS*TGYSTA
Trigger: AGCTGTGGAATAACCTGTGCAGGAGATGAAAAAGAA...CACTTGGTTATCATTACTGTTGGGTGAACCTGTGAAGATAACATGAACACTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR GCA 90 bp ATCTGCTGCTTTCTTACGTATTTATGGCAATGCTGGCAAAAGGCTGCAAAAACTAGTAGAGAAGCATGTTaGTTGTGGGTAATTGTACTA +
Preference number: 4 (lower is better)
Translates to: ICCFLTYLWQCWQKAAKTSREAC*LWVIVL
Trigger: TAGTACAATTACCCACAAGCAACATGCTTCTCTACT...AGTTTTTGCAGCCTTTTGCCAGCATTGCCATAAATACGTAAGAAAGCAGCAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR GCA 90 bp ACTGTTTCTTTAGTTCTGCCACTGTTTGGTCCAGACGAATGCTCATTTCTTCCAAACCATCAATTACAATaGCCTAAAAATACCCACATC +
Preference number: 4 (lower is better)
Translates to: TVSLVLPLFGPDECSFLPNHQLQ*PKNTHI
Trigger: GATGTGGGTATTTTTAGGGCATTGTAATTGATGGTT...TGGAAGAAATGAGCATTCGTCTGGACCAAACAGTGGCAGAACTAAAGAAACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284259.11
CDS-3UTR CCA 90 bp CAAATTCAAAAATTGGTTTCTACTGTGGCTTTAGCAGCCGTTCACCCACATGTAGAAGCATGTTGCTTGTaGGTAATTGTACTAGAGTTT +
Preference number: 4 (lower is better)
Translates to: QIQKLVSTVALAAVHPHVEACCL*VIVLEF
Trigger: AAACTCTAGTACAATTACCCACAAGCAACATGCTTC...TACATGTGGGTGAACGGCTGCTAAAGCCACAGTAGAAACCAATTTTTGAATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR CCA 90 bp ATGTTATCTTCACAGGTTCACCCAACAGTAATGATAACCAAGTGGCAGGCAAATGAAGCATGTTGCTTGTaGGTAATTGTACTAGAGTTT +
Preference number: 4 (lower is better)
Translates to: MLSSQVHPTVMITKWQANEACCL*VIVLEF
Trigger: AAACTCTAGTACAATTACCCACAAGCAACATGCTTC...ATTTGCCTGCCACTTGGTTATCATTACTGTTGGGTGAACCTGTGAAGATAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CCA 90 bp GTCCAGACGAATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTTCTACTTTAACTGCAAGTTTTCCTaGAGTTTTCATTCTACATCT +
Preference number: 4 (lower is better)
Translates to: VQTNAHFFHLIVKVDFYFNCKFS*SFHSTS
Trigger: AGATGTAGAATGAAAACTCCAGGAAAACTTGCAGTT...AAAGTAGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATTCGTCTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR TCA 90 bp AATTTAGTTTATCAATGTCTTCCCAGGACTGCAAACTCTGGTAACTCCTGTAGTATTAAGTTTGGAAACTaGTGGCAATCTGGCTATTAC +
Preference number: 4 (lower is better)
Translates to: NLVYQCLPRTANSGNSCSIKFGN*WQSGYY
Trigger: GTAATAGCCAGATTGCCATCAGTTTCCAAACTTAAT...ACTACAGGAGTTACCAGAGTTTGCAGTCCTGGGAAGACATTGATAAACTAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533712.5
CDS-3UTR TCA 90 bp AGTTTTCATTCTACATCTACTCTTCGAGGTTCTAACAGAGTTATAGCTTCTTACCTCATTTCTTCCACCTaGTCGTTAAAGTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: SFHSTSTLRGSNRVIASYLISST*SLKWTS
Trigger: AGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAG...GTAAGAAGCTATAACTCTGTTAGAACCTCGAAGAGTAGATGTAGAATGAAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR TCA 90 bp TGGAGTTTTCATTCTACATCTACTCTTCGAGGTTCTAACAGAGTTATAGCTTCTACCACAGATAGTTTATaGGCTAATTCTCAACTCTCC +
Preference number: 4 (lower is better)
Translates to: WSFHSTSTLRGSNRVIASTTDSL*ANSQLS
Trigger: GGAGAGTTGAGAATTAGCTCATAAACTATCTGTGGT...AGAAGCTATAACTCTGTTAGAACCTCGAAGAGTAGATGTAGAATGAAAACTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR GCA 90 bp TGGAGTTTTCATTCTACATCTACTCTTCGAGGTTCTAACAGAGTTATAGCTTCTCACTTACACACTTTCTaGCCCAGTTATGCTAAGTAT +
Preference number: 4 (lower is better)
Translates to: WSFHSTSTLRGSNRVIASHLHTF*PSYAKY
Trigger: ATACTTAGCATAACTGGGGCAGAAAGTGTGTAAGTG...AGAAGCTATAACTCTGTTAGAACCTCGAAGAGTAGATGTAGAATGAAAACTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR CCA 90 bp AATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTTCTACTTTTGCACTGCTATTTCAGTCCAGTCTTaGAGGTTATTGTCTGTTATA +
Preference number: 4 (lower is better)
Translates to: NAHFFHLIVKVDFYFCTAISVQS*RLLSVI
Trigger: TATAACAGACAATAACCTCCAAGACTGGACTGAAAT...AGCAGTGCAAAAGTAGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284259.11
CDS-3UTR CCA 90 bp CAAATTCAAAAATTGGTTTCTACTGTGGCTTTAGCAGCCGTTCACCCACATGTAATTTCAGTCCAGTCTTaGAGGTTATTGTCTGTTATA +
Preference number: 4 (lower is better)
Translates to: QIQKLVSTVALAAVHPHVISVQS*RLLSVI
Trigger: TATAACAGACAATAACCTCCAAGACTGGACTGAAAT...TACATGTGGGTGAACGGCTGCTAAAGCCACAGTAGAAACCAATTTTTGAATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR CCA 90 bp ATGATTTTGAAAGATAAAGTCTGCAGCAGAAGGAGAATAGGCCTTATTCGTCTTCATAGCTGGAACATCTaGTTAGAACTGAATTTTCCT +
Preference number: 4 (lower is better)
Translates to: MILKDKVCSRRRIGLIRLHSWNI*LELNFP
Trigger: AGGAAAATTCAGTTCTAACCAGATGTTCCAGCTATG...AAGACGAATAAGGCCTATTCTCCTTCTGCTGCAGACTTTATCTTTCAAAATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR CCA 90 bp AGTTTTCATTCTACATCTACTCTTCGAGGTTCTAACAGAGTTATAGCTTCTTACAAACTGATGGCAATCTaGCTATTACCAATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SFHSTSTLRGSNRVIASYKLMAI*LLPISF
Trigger: GAAGGAAATTGGTAATAGCCAGATTGCCATCAGTTT...GTAAGAAGCTATAACTCTGTTAGAACCTCGAAGAGTAGATGTAGAATGAAAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR GCA 90 bp AGTTTTCATTCTACATCTACTCTTCGAGGTTCTAACAGAGTTATAGCTTCTTACAACCATCAATTACAATaGCCTAAAAATACCCACATC +
Preference number: 4 (lower is better)
Translates to: SFHSTSTLRGSNRVIASYNHQLQ*PKNTHI
Trigger: GATGTGGGTATTTTTAGGGCATTGTAATTGATGGTT...GTAAGAAGCTATAACTCTGTTAGAACCTCGAAGAGTAGATGTAGAATGAAAACT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR GCA 90 bp AGTTTTCATTCTACATCTACTCTTCGAGGTTCTAACAGAGTTATAGCTTCTTACGCTATGACAGCATTTTaGCTCATAATGTCAATACTA +
Preference number: 4 (lower is better)
Translates to: SFHSTSTLRGSNRVIASYAMTAF*LIMSIL
Trigger: TAGTATTGACATTATGAGGCAAAATGCTGTCATAGC...GTAAGAAGCTATAACTCTGTTAGAACCTCGAAGAGTAGATGTAGAATGAAAACT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS GCA 90 bp CTTAAAATGCTAGTCCCCCACTCTGGCCGCCGGAGCCCAGTGTCCTaGATTGACCCGGAAGCAGCTTTCCCGGCCCAACAACAACACGTG +
Preference number: 5 (lower is better)
Translates to: LKMLVPHSGRRSPVS*IDPEAAFPAQQQHV
Trigger: CACGTGTTGTTGTTGGGCCGGGAAAGCTGCTTCCGGGTCAATGCAGGACACTGGGCTCCGGCGGCCAGAGTGGGGGACTAGCATTTTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529397.5
CDS CCA 90 bp TGGGAGGTTGAGGCGATCTTTCATAGGAGAGCCCTGAGGTGTGGCTaGGACATGGACTCCCATCCCCGGGCCACGGCGATAAGGAAAATT +
Preference number: 5 (lower is better)
Translates to: WEVEAIFHRRALRCG*DMDSHPRATAIRKI
Trigger: AATTTTCCTTATCGCCGTGGCCCGGGGATGGGAGTCCATGTCCCAGCCACACCTCAGGGCTCTCCTATGAAAGATCGCCTCAACCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000524726.1
ENST00000529397.5
ENST00000531148.5
ENST00000533712.5
ENST00000683345.1
CDS TCA 90 bp CCTGTAGTATCATGTGGACCGTCTCCCAAGAAGCTTTGCTGTTGTTaGGGACAAGTTTGCGAACCCCAGAGAAGGACCCAGCACATGTTC +
Preference number: 5 (lower is better)
Translates to: PVVSCGPSPKKLCCC*GQVCEPQRRTQHMF
Trigger: GAACATGTGCTGGGTCCTTCTCTGGGGTTCGCAAACTTGTCCTCAACAACAGCAAAGCTTCTTGGGAGACGGTCCACATGATACTACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000524726.1
ENST00000529397.5
ENST00000533134.1
ENST00000533712.5
ENST00000683345.1
CDS-3UTR CAA 90 bp CAAAGGCTCCAACTTCCCATATTTAGTGATCAGTTCATGATACCTGAATGGCACGCCCAGTGTCCTGCATaGACCCGGAAGCAGCTTTCC +
Preference number: 5 (lower is better)
Translates to: QRLQLPIFSDQFMIPEWHAQCPA*TRKQLS
Trigger: GGAAAGCTGCTTCCGGGTCAATGCAGGACACTGGGC...GTGCCATTCAGGTATCATGAACTGATCACTAAATATGGGAAGTTGGAGCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284259.11
CDS-3UTR CAA 90 bp TCTACTTTTGCACTGCTCTGGGGTCTTAGGTCCACTTCTGCCAAAGGCTCCAACAGTACACTTGGGAGGTaGAGGCGATCTTTCATAGGA +
Preference number: 5 (lower is better)
Translates to: STFALLWGLRSTSAKGSNSTLGR*RRSFIG
Trigger: TCCTATGAAAGATCGCCTCAACCTCCCAAGTGTACT...GTTGGAGCCTTTGGCAGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CAA 90 bp GCACATACACTGGAAATGTGGCCAATTCCGCTGGCTGAGCCAAATCAATCTGTGGAAGCTTTGCTGTTGTaGAGGACAAGTTTGCGAACC +
Preference number: 5 (lower is better)
Translates to: AHTLEMWPIPLAEPNQSVEALLL*RTSLRT
Trigger: GGTTCGCAAACTTGTCCTCAACAACAGCAAAGCTTC...CACAGATTGATTTGGCTCAGCCAGCGGAATTGGCCACATTTCCAGTGTATGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR CAA 90 bp GACACAGGTGGGAAAGTCATAAGCTCTTCCCCCACATCCCCCAACTTCATTCCCGACAAATTCAGAGGGTaGGAACTCAGGTTTAGAAAC +
Preference number: 5 (lower is better)
Translates to: DTGGKVISSSPTSPNFIPDKFRG*ELRFRN
Trigger: GTTTCTAAACCTGAGTTCCAACCCTCTGAATTTGTC...GGGAATGAAGTTGGGGGATGTGGGGGAAGAGCTTATGACTTTCCCACCTGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS CCA 90 bp CACAGGAAGAGCTCCTCCAAATCTGGTAACTCCTGTAGTATCATGTaGACCGTCTCCCAAGAAGCTTTGCTGTTGTTGAGGACAAGTTTG +
Preference number: 5 (lower is better)
Translates to: HRKSSSKSGNSCSIM*TVSQEALLLLRTSL
Trigger: CAAACTTGTCCTCAACAACAGCAAAGCTTCTTGGGAGACGGTCCACATGATACTACAGGAGTTACCAGATTTGGAGGAGCTCTTCCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000524726.1
ENST00000529397.5
ENST00000533134.1
ENST00000683345.1
CDS-3UTR CAA 90 bp TCCCCACACACACCACAGATAGTTTATGAGCTAATTCTCAACTCTCCTGGTGCATTGTTGAGGACAAGTTaGCGAACCCCAGAGAAGGAC +
Preference number: 5 (lower is better)
Translates to: SPHTPQIVYELILNSPGALLRTS*RTPEKD
Trigger: GTCCTTCTCTGGGGTTCGCAAACTTGTCCTCAACAA...TGCACCAGGAGAGTTGAGAATTAGCTCATAAACTATCTGTGGTGTGTGTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR CAA 90 bp AAACTGATGGCAATCTGGCTATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGACTGCAAACCTGACTaGTGGAGGCTGATGGATCGA +
Preference number: 5 (lower is better)
Translates to: KLMAIWLLPISFAPRWYMDCKPD*WRLMDR
Trigger: TCGATCCATCAGCCTCCACAAGTCAGGTTTGCAGTC...CATATACCACCGAGGAGCGAAGGAAATTGGTAATAGCCAGATTGCCATCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284259.11
CDS-3UTR CAA 90 bp GACACAGGTGGGAAAGTCATAAGCTCTTCCCCCACATCCCCCAACTTCATTCCCACTTCTTCCACTAGGTaGATCCATCTTTCTTTCTTA +
Preference number: 5 (lower is better)
Translates to: DTGGKVISSSPTSPNFIPTSSTR*IHLSFL
Trigger: TAAGAAAGAAAGATGGATCAACCTAGTGGAAGAAGT...GGGAATGAAGTTGGGGGATGTGGGGGAAGAGCTTATGACTTTCCCACCTGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CAA 90 bp TTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCTAACAATCTCACTTAGTACACTTGGGAGGTaGAGGCGATCTTTCATAGGA +
Preference number: 5 (lower is better)
Translates to: FAPRWYMAAEEEFLTISLSTLGR*RRSFIG
Trigger: TCCTATGAAAGATCGCCTCAACCTCCCAAGTGTACT...AAGTGAGATTGTTAGGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CAA 90 bp GCACATACACTGGAAATGTGGCCAATTCCGCTGGCTGAGCCAAATCAATCTGTGCAGTCTTCGAGTTTGTaGTCAGAAAGATCTAGTTCC +
Preference number: 5 (lower is better)
Translates to: AHTLEMWPIPLAEPNQSVQSSSL*SERSSS
Trigger: GGAACTAGATCTTTCTGACAACAAACTCGAAGACTG...CACAGATTGATTTGGCTCAGCCAGCGGAATTGGCCACATTTCCAGTGTATGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CAA 90 bp CGTTCACCATCAGTAACAACGCTGCCATTAAGTTTGGAAACTGATGGCAATCTGTTGTTGAGGACAAGTTaGCGAACCCCAGAGAAGGAC +
Preference number: 5 (lower is better)
Translates to: RSPSVTTLPLSLETDGNLLLRTS*RTPEKD
Trigger: GTCCTTCTCTGGGGTTCGCAAACTTGTCCTCAACAA...CAGATTGCCATCAGTTTCCAAACTTAATGGCAGCGTTGTTACTGATGGTGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000533712.5
CDS-3UTR CAA 90 bp CGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCTAACAATCTCACTTCTCAAGAAGCTTTGCTGTaGTTGAGGACAAGTTTGCGA +
Preference number: 5 (lower is better)
Translates to: RSSVVYGCRRGIPNNLTSQEALL*LRTSLR
Trigger: TCGCAAACTTGTCCTCAACAACAGCAAAGCTTCTTG...AGAAGTGAGATTGTTAGGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000533712.5
CDS-3UTR CAA 90 bp ATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCTAGTGGACTTCTACTTTaGCACTGCTCTGGGGTCTTA +
Preference number: 5 (lower is better)
Translates to: ITNFLRSSVVYGCRRGIPSGLLL*HCSGVL
Trigger: TAAGACCCCAGAGCAGTGCAAAAGTAGAAGTCCACT...AGGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CAA 90 bp CTTCTACTTTTGCACTGCTCTGGGGTCTTAGGTCCACTTCTGCCAAAGGCTCCAAAGTCGGTGATTTCTTaGTCATCTTTCCTTAGAGAG +
Preference number: 5 (lower is better)
Translates to: LLLLHCSGVLGPLLPKAPKSVIS*SSFLRE
Trigger: CTCTCTAAGGAAAGATGACAAAGAAATCACCGACTT...TGGAGCCTTTGGCAGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR CAA 90 bp CTTCTACTTTTGCACTGCTCTGGGGTCTTAGGTCCACTTCTGCCAAAGGCTCCAGAATTATGTCCGCAGTaGATAAACACTGTGTTCTGT +
Preference number: 5 (lower is better)
Translates to: LLLLHCSGVLGPLLPKAPELCPQ*INTVFC
Trigger: ACAGAACACAGTGTTTATCAACTGCGGACATAATTC...TGGAGCCTTTGGCAGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284259.11
CDS-3UTR CAA 90 bp TGTTTGGTCCAGACGAATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTTCGAAGCTTTGCTGTTGTaGAGGACAAGTTTGCGAACC +
Preference number: 5 (lower is better)
Translates to: CLVQTNAHFFHLIVKVDFEALLL*RTSLRT
Trigger: GGTTCGCAAACTTGTCCTCAACAACAGCAAAGCTTC...GAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATTCGTCTGGACCAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000533712.5
CDS-3UTR CAA 90 bp AAACTGATGGCAATCTGGCTATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGAAGCTTTGCTGTTGTaGAGGACAAGTTTGCGAACC +
Preference number: 5 (lower is better)
Translates to: KLMAIWLLPISFAPRWYMEALLL*RTSLRT
Trigger: GGTTCGCAAACTTGTCCTCAACAACAGCAAAGCTTC...CATATACCACCGAGGAGCGAAGGAAATTGGTAATAGCCAGATTGCCATCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000533712.5
CDS-3UTR CAA 90 bp CCAATTCCGCTGGCTGAGCCAAATCAATCTGTGGTAGAAAACACCCAAAAATGGCAAGAAGCTTTGCTGTaGTTGAGGACAAGTTTGCGA +
Preference number: 5 (lower is better)
Translates to: PIPLAEPNQSVVENTQKWQEALL*LRTSLR
Trigger: TCGCAAACTTGTCCTCAACAACAGCAAAGCTTCTTG...CCATTTTTGGGTGTTTTCTACCACAGATTGATTTGGCTCAGCCAGCGGAATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR CAA 90 bp TTCTTCCACCTGATCGTTAAAGTGGACTTCTACTTTTGCACTGCTCTGGGGTCTACGCTGCCATTAAGTTaGGAAACTGATGGCAATCTG +
Preference number: 5 (lower is better)
Translates to: FFHLIVKVDFYFCTALGSTLPLS*ETDGNL
Trigger: CAGATTGCCATCAGTTTCCAAACTTAATGGCAGCGT...AGACCCCAGAGCAGTGCAAAAGTAGAAGTCCACTTTAACGATCAGGTGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CAA 90 bp GCACATACACTGGAAATGTGGCCAATTCCGCTGGCTGAGCCAAATCAATCTGTGAAGTCGGTGATTTCTTaGTCATCTTTCCTTAGAGAG +
Preference number: 5 (lower is better)
Translates to: AHTLEMWPIPLAEPNQSVKSVIS*SSFLRE
Trigger: CTCTCTAAGGAAAGATGACAAAGAAATCACCGACTT...CACAGATTGATTTGGCTCAGCCAGCGGAATTGGCCACATTTCCAGTGTATGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CAA 90 bp GCACATACACTGGAAATGTGGCCAATTCCGCTGGCTGAGCCAAATCAATCTGTGTCCTGTGAAGATTCCTaGTCACCCTGTTTAAATTCT +
Preference number: 5 (lower is better)
Translates to: AHTLEMWPIPLAEPNQSVSCEDS*SPCLNS
Trigger: AGAATTTAAACAGGGTGACAAGGAATCTTCACAGGA...CACAGATTGATTTGGCTCAGCCAGCGGAATTGGCCACATTTCCAGTGTATGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CAA 90 bp CAGGCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCAGTACACTTGGGAGGTaGAGGCGATCTTTCATAGGA +
Preference number: 5 (lower is better)
Translates to: QANPSEHSKKSVISLSSFSTLGR*RRSFIG
Trigger: TCCTATGAAAGATCGCCTCAACCTCCCAAGTGTACT...GAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CAA 90 bp TCGTTAAAGTGGACTTCTACTTTTGCACTGCTCTGGGGTCTTAGGTCCACTTCTTGCCAGTCTTCGAGTTaGTTGTCAGAAAGATCTAGT +
Preference number: 5 (lower is better)
Translates to: SLKWTSTFALLWGLRSTSCQSSS*LSERSS
Trigger: ACTAGATCTTTCTGACAACAAACTCGAAGACTGGCA...AGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGAAGTCCACTTTAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CAA 90 bp AAACTGATGGCAATCTGGCTATTACCAATTTCCTTCGCTCCTCGGTGGTATATGCAAGAAGCTTTGCTGTaGTTGAGGACAAGTTTGCGA +
Preference number: 5 (lower is better)
Translates to: KLMAIWLLPISFAPRWYMQEALL*LRTSLR
Trigger: TCGCAAACTTGTCCTCAACAACAGCAAAGCTTCTTG...CATATACCACCGAGGAGCGAAGGAAATTGGTAATAGCCAGATTGCCATCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000533712.5
CDS-3UTR CAA 90 bp CATACAAAGAGATCAGACTGTTCTGCCGGTGCTTCCAGAATAACTGCAAGTTTTTCCTACCACTGCTGGTaGAGTAACATAGCTGGAACA +
Preference number: 5 (lower is better)
Translates to: HTKRSDCSAGASRITASFSYHCW*SNIAGT
Trigger: TGTTCCAGCTATGTTACTCAACCAGCAGTGGTAGGA...AAAACTTGCAGTTATTCTGGAAGCACCGGCAGAACAGTCTGATCTCTTTGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS GCA 90 bp CCTTCCAGAGCAGTTTACAAACCACCCTGGCTAATAACCAGGGATTaGCAGAATGTTGAAACATCAATCACGCATAAAGGTTGCAAAAGT +
Preference number: 5 (lower is better)
Translates to: PSRAVYKPPWLITRD*QNVETSITHKGCKS
Trigger: ACTTTTGCAACCTTTATGCGTGATTGATGTTTCAACATTCTGGCAATCCCTGGTTATTAGCCAGGGTGGTTTGTAAACTGCTCTGGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524726.1
CDS-3UTR CAA 90 bp AATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCTAACAATCAGTCTTCGAGTTTGTaGTCAGAAAGATCTAGTTCC +
Preference number: 5 (lower is better)
Translates to: NFLRSSVVYGCRRGIPNNQSSSL*SERSSS
Trigger: GGAACTAGATCTTTCTGACAACAAACTCGAAGACTG...ATTGTTAGGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CAA 90 bp TCGGTGGTATATGGCTGCAGAAGAGGAATTCCTAACAATCTCACTTCTTCCAGTCAGTCTTCGAGTTTGTaGTCAGAAAGATCTAGTTCC +
Preference number: 5 (lower is better)
Translates to: SVVYGCRRGIPNNLTSSSQSSSL*SERSSS
Trigger: GGAACTAGATCTTTCTGACAACAAACTCGAAGACTG...ACTGGAAGAAGTGAGATTGTTAGGAATTCCTCTTCTGCAGCCATATACCACCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CAA 90 bp ATGATACCTGAATGGCACTTCTTCCTGTGGAACATCCACATAGTAACGAATAAATTGTTGAGGACAAGTTaGCGAACCCCAGAGAAGGAC +
Preference number: 5 (lower is better)
Translates to: MIPEWHFFLWNIHIVTNKLLRTS*RTPEKD
Trigger: GTCCTTCTCTGGGGTTCGCAAACTTGTCCTCAACAA...TTTATTCGTTACTATGTGGATGTTCCACAGGAAGAAGTGCCATTCAGGTATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000533712.5
CDS-3UTR CAA 90 bp ATGATTTTGAAAGATAAAGTCTGCAGCAGAAGGAGAATAGGCCTTATTCGTCTTGACTGCAAACCTGACTaGTGGAGGCTGATGGATCGA +
Preference number: 5 (lower is better)
Translates to: MILKDKVCSRRRIGLIRLDCKPD*WRLMDR
Trigger: TCGATCCATCAGCCTCCACAAGTCAGGTTTGCAGTC...AAGACGAATAAGGCCTATTCTCCTTCTGCTGCAGACTTTATCTTTCAAAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR CAA 90 bp CATACAAAGAGATCAGACTGTTCTGCCGGTGCTTCCAGAATAACTGCAAGTTTTACGCTGCCATTAAGTTaGGAAACTGATGGCAATCTG +
Preference number: 5 (lower is better)
Translates to: HTKRSDCSAGASRITASFTLPLS*ETDGNL
Trigger: CAGATTGCCATCAGTTTCCAAACTTAATGGCAGCGT...AAAACTTGCAGTTATTCTGGAAGCACCGGCAGAACAGTCTGATCTCTTTGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CAA 90 bp GAGCTAATTCTCAACTCTCCTGGTGCACGTATCCAGGACTCTATTGAATTATTTAGTGGACTTCTACTTTaGCACTGCTCTGGGGTCTTA +
Preference number: 5 (lower is better)
Translates to: ELILNSPGARIQDSIELFSGLLL*HCSGVL
Trigger: TAAGACCCCAGAGCAGTGCAAAAGTAGAAGTCCACT...AAATAATTCAATAGAGTCCTGGATACGTGCACCAGGAGAGTTGAGAATTAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CAA 90 bp TATTACCAATTTCCTTCGCTCCTCGGTGGTATATGGCTGCAGAAGAGGAATTCCTCCTGTGAAGATTCCTaGTCACCCTGTTTAAATTCT +
Preference number: 5 (lower is better)
Translates to: YYQFPSLLGGIWLQKRNSSCEDS*SPCLNS
Trigger: AGAATTTAAACAGGGTGACAAGGAATCTTCACAGGA...GGAATTCCTCTTCTGCAGCCATATACCACCGAGGAGCGAAGGAAATTGGTAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR CAA 90 bp CAGGCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCAGCTTCTGGGTGTTCTaGAGAGCAGTTTGTTTGCAT +
Preference number: 5 (lower is better)
Translates to: QANPSEHSKKSVISLSSFSFWVF*RAVCLH
Trigger: ATGCAAACAAACTGCTCTCAAGAACACCCAGAAGCT...GAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS TCA 90 bp TACTTAGCTGTTTACAGAACAGATTACCCCCATTATCTGTGCTCTTaGGCAGCTACAGAAGCCATCATGTTAAGGAAAAGCCTCATTAGG +
Preference number: 5 (lower is better)
Translates to: YLAVYRTDYPHYLCS*AATEAIMLRKSLIR
Trigger: CCTAATGAGGCTTTTCCTTAACATGATGGCTTCTGTAGCTGCTCAAGAGCACAGATAATGGGGGTAATCTGTTCTGTAAACAGCTAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524726.1
CDS-3UTR CAA 90 bp TCGTTAAAGTGGACTTCTACTTTTGCACTGCTCTGGGGTCTTAGGTCCACTTCTACTTCTTCCACTAGGTaGATCCATCTTTCTTTCTTA +
Preference number: 5 (lower is better)
Translates to: SLKWTSTFALLWGLRSTSTSSTR*IHLSFL
Trigger: TAAGAAAGAAAGATGGATCAACCTAGTGGAAGAAGT...AGAAGTGGACCTAAGACCCCAGAGCAGTGCAAAAGTAGAAGTCCACTTTAACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CAA 90 bp GTCCAGACGAATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTTCTACTTTCAGTCTTCGAGTTTGTaGTCAGAAAGATCTAGTTCC +
Preference number: 5 (lower is better)
Translates to: VQTNAHFFHLIVKVDFYFQSSSL*SERSSS
Trigger: GGAACTAGATCTTTCTGACAACAAACTCGAAGACTG...AAAGTAGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATTCGTCTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CAA 90 bp TCCCCACACACACCACAGATAGTTTATGAGCTAATTCTCAACTCTCCTGGTGCATATTTCAGTCCAGTCTaGGAGGTTATTGTCTGTTAT +
Preference number: 5 (lower is better)
Translates to: SPHTPQIVYELILNSPGAYFSPV*EVIVCY
Trigger: ATAACAGACAATAACCTCCAAGACTGGACTGAAATA...TGCACCAGGAGAGTTGAGAATTAGCTCATAAACTATCTGTGGTGTGTGTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR CAA 90 bp ATGTTATCTTCACAGGTTCACCCAACAGTAATGATAACCAAGTGGCAGGCAAATACGCTGCCATTAAGTTaGGAAACTGATGGCAATCTG +
Preference number: 5 (lower is better)
Translates to: MLSSQVHPTVMITKWQANTLPLS*ETDGNL
Trigger: CAGATTGCCATCAGTTTCCAAACTTAATGGCAGCGT...ATTTGCCTGCCACTTGGTTATCATTACTGTTGGGTGAACCTGTGAAGATAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CAA 90 bp TACAGTGTTCATGTTATCTTCACAGGTTCACCCAACAGTAATGATAACCAAGTGAGTGGACTTCTACTTTaGCACTGCTCTGGGGTCTTA +
Preference number: 5 (lower is better)
Translates to: YSVHVIFTGSPNSNDNQVSGLLL*HCSGVL
Trigger: TAAGACCCCAGAGCAGTGCAAAAGTAGAAGTCCACT...CACTTGGTTATCATTACTGTTGGGTGAACCTGTGAAGATAACATGAACACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CAA 90 bp ATCTGCTGCTTTCTTACGTATTTATGGCAATGCTGGCAAAAGGCTGCAAAAACTTGCCAGTCTTCGAGTTaGTTGTCAGAAAGATCTAGT +
Preference number: 5 (lower is better)
Translates to: ICCFLTYLWQCWQKAAKTCQSSS*LSERSS
Trigger: ACTAGATCTTTCTGACAACAAACTCGAAGACTGGCA...AGTTTTTGCAGCCTTTTGCCAGCATTGCCATAAATACGTAAGAAAGCAGCAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR CAA 90 bp AACACATCTGGTAACACAGATAGCTTCTGGGTGTTCTTGAGAGCAGTTTGTTTGCAGTCTTGGAGGTTATaGTCTGTTATATGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: NTSGNTDSFWVFLRAVCLQSWRL*SVICSS
Trigger: GCTACTACATATAACAGACAATAACCTCCAAGACTG...CAAACAAACTGCTCTCAAGAACACCCAGAAGCTATCTGTGTTACCAGATGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR CAA 90 bp ATGATTTTGAAAGATAAAGTCTGCAGCAGAAGGAGAATAGGCCTTATTCGTCTTAGTGGACTTCTACTTTaGCACTGCTCTGGGGTCTTA +
Preference number: 5 (lower is better)
Translates to: MILKDKVCSRRRIGLIRLSGLLL*HCSGVL
Trigger: TAAGACCCCAGAGCAGTGCAAAAGTAGAAGTCCACT...AAGACGAATAAGGCCTATTCTCCTTCTGCTGCAGACTTTATCTTTCAAAATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR CAA 90 bp CAGGCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCAAGTCGGTGATTTCTTaGTCATCTTTCCTTAGAGAG +
Preference number: 5 (lower is better)
Translates to: QANPSEHSKKSVISLSSFKSVIS*SSFLRE
Trigger: CTCTCTAAGGAAAGATGACAAAGAAATCACCGACTT...GAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CAA 90 bp CAAAGGCTCCAACTTCCCATATTTAGTGATCAGTTCATGATACCTGAATGGCACTCCTGTGAAGATTCCTaGTCACCCTGTTTAAATTCT +
Preference number: 5 (lower is better)
Translates to: QRLQLPIFSDQFMIPEWHSCEDS*SPCLNS
Trigger: AGAATTTAAACAGGGTGACAAGGAATCTTCACAGGA...GTGCCATTCAGGTATCATGAACTGATCACTAAATATGGGAAGTTGGAGCCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR CAA 90 bp ACTGTTTCTTTAGTTCTGCCACTGTTTGGTCCAGACGAATGCTCATTTCTTCCACAGCCTGGATCTCCATaGCTCATTTTTATGATTTTG +
Preference number: 5 (lower is better)
Translates to: TVSLVLPLFGPDECSFLPQPGSP*LIFMIL
Trigger: CAAAATCATAAAAATGAGCAATGGAGATCCAGGCTG...TGGAAGAAATGAGCATTCGTCTGGACCAAACAGTGGCAGAACTAAAGAAACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284259.11
CDS-3UTR CAA 90 bp AACACATCTGGTAACACAGATAGCTTCTGGGTGTTCTTGAGAGCAGTTTGTTTGCAGCCTGGATCTCCATaGCTCATTTTTATGATTTTG +
Preference number: 5 (lower is better)
Translates to: NTSGNTDSFWVFLRAVCLQPGSP*LIFMIL
Trigger: CAAAATCATAAAAATGAGCAATGGAGATCCAGGCTG...CAAACAAACTGCTCTCAAGAACACCCAGAAGCTATCTGTGTTACCAGATGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR CAA 90 bp TATATATTTCCATTAACTGCGGGAGACAACTGGCAAGTAAAGAGCCTGAGAGAGGAATTATGTCCGCAGTaGATAAACACTGTGTTCTGT +
Preference number: 5 (lower is better)
Translates to: YIFPLTAGDNWQVKSLREELCPQ*INTVFC
Trigger: ACAGAACACAGTGTTTATCAACTGCGGACATAATTC...CTCTCTCAGGCTCTTTACTTGCCAGTTGTCTCCCGCAGTTAATGGAAATATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS-3UTR CAA 90 bp ACTGTTTCTTTAGTTCTGCCACTGTTTGGTCCAGACGAATGCTCATTTCTTCCAACTTCTTCCACTAGGTaGATCCATCTTTCTTTCTTA +
Preference number: 5 (lower is better)
Translates to: TVSLVLPLFGPDECSFLPTSSTR*IHLSFL
Trigger: TAAGAAAGAAAGATGGATCAACCTAGTGGAAGAAGT...TGGAAGAAATGAGCATTCGTCTGGACCAAACAGTGGCAGAACTAAAGAAACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000531148.5
ENST00000533712.5
CDS-3UTR CAA 90 bp TACAGTGTTCATGTTATCTTCACAGGTTCACCCAACAGTAATGATAACCAAGTGTGCCAGTCTTCGAGTTaGTTGTCAGAAAGATCTAGT +
Preference number: 5 (lower is better)
Translates to: YSVHVIFTGSPNSNDNQVCQSSS*LSERSS
Trigger: ACTAGATCTTTCTGACAACAAACTCGAAGACTGGCA...CACTTGGTTATCATTACTGTTGGGTGAACCTGTGAAGATAACATGAACACTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CAA 90 bp AATGCTCATTTCTTCCACCTGATCGTTAAAGTGGACTTCTACTTTTGCACTGCTCAGTCTTGGAGGTTATaGTCTGTTATATGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: NAHFFHLIVKVDFYFCTAQSWRL*SVICSS
Trigger: GCTACTACATATAACAGACAATAACCTCCAAGACTG...AGCAGTGCAAAAGTAGAAGTCCACTTTAACGATCAGGTGGAAGAAATGAGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284259.11
CDS-3UTR CAA 90 bp TGGAGTTTTCATTCTACATCTACTCTTCGAGGTTCTAACAGAGTTATAGCTTCTACGCTGCCATTAAGTTaGGAAACTGATGGCAATCTG +
Preference number: 5 (lower is better)
Translates to: WSFHSTSTLRGSNRVIASTLPLS*ETDGNL
Trigger: CAGATTGCCATCAGTTTCCAAACTTAATGGCAGCGT...AGAAGCTATAACTCTGTTAGAACCTCGAAGAGTAGATGTAGAATGAAAACTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CAA 90 bp CATACAAAGAGATCAGACTGTTCTGCCGGTGCTTCCAGAATAACTGCAAGTTTTCTGGTAGAGGTTATTTaGTTTTGGATTCCACGTAAA +
Preference number: 5 (lower is better)
Translates to: HTKRSDCSAGASRITASFLVEVI*FWIPRK
Trigger: TTTACGTGGAATCCAAAACAAAATAACCTCTACCAG...AAAACTTGCAGTTATTCTGGAAGCACCGGCAGAACAGTCTGATCTCTTTGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CAA 90 bp GCAAATCCCAGTGAACACAGTAAGAAGTCGGTGATTTCTTTGTCATCTTTCCTTGGCTATGACAGCATTTaGCCTCATAATGTCAATACT +
Preference number: 5 (lower is better)
Translates to: ANPSEHSKKSVISLSSFLGYDSI*PHNVNT
Trigger: AGTATTGACATTATGAGGCAAAATGCTGTCATAGCC...AAGGAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422003.6
CDS TCA 90 bp AGTTGCATTTATTCAAAGCAGGATCAGATACATTTACTCCTGAACTaGTGTCCCCAAACCAAATGTCCCCACACTGAGATTAACAATCAT +
Preference number: 5 (lower is better)
Translates to: SCIYSKQDQIHLLLN*CPQTKCPHTEINNH
Trigger: ATGATTGTTAATCTCAGTGTGGGGACATTTGGTTTGGGGACATCAGTTCAGGAGTAAATGTATCTGATCCTGCTTTGAATAAATGCAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524726.1
CDS TCA 90 bp TTTCAAGTTGCATTTATTCAAAGCAGGATCAGATACATTTACTCCTaGACTGATGTCCCCAAACCAAATGTCCCCACACTGAGATTAACA +
Preference number: 5 (lower is better)
Translates to: FQVAFIQSRIRYIYS*TDVPKPNVPTLRLT
Trigger: TGTTAATCTCAGTGTGGGGACATTTGGTTTGGGGACATCAGTTCAGGAGTAAATGTATCTGATCCTGCTTTGAATAAATGCAACTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524726.1
CDS-3UTR CAA 90 bp ATGTTATCTTCACAGGTTCACCCAACAGTAATGATAACCAAGTGGCAGGCAAATACTTCTTCCACTAGGTaGATCCATCTTTCTTTCTTA +
Preference number: 5 (lower is better)
Translates to: MLSSQVHPTVMITKWQANTSSTR*IHLSFL
Trigger: TAAGAAAGAAAGATGGATCAACCTAGTGGAAGAAGT...ATTTGCCTGCCACTTGGTTATCATTACTGTTGGGTGAACCTGTGAAGATAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CAA 90 bp ATGATTTTGAAAGATAAAGTCTGCAGCAGAAGGAGAATAGGCCTTATTCGTCTTTGCCAGTCTTCGAGTTaGTTGTCAGAAAGATCTAGT +
Preference number: 5 (lower is better)
Translates to: MILKDKVCSRRRIGLIRLCQSSS*LSERSS
Trigger: ACTAGATCTTTCTGACAACAAACTCGAAGACTGGCA...AAGACGAATAAGGCCTATTCTCCTTCTGCTGCAGACTTTATCTTTCAAAATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS-3UTR CAA 90 bp GAGCTAATTCTCAACTCTCCTGGTGCACGTATCCAGGACTCTATTGAATTATTTCTGGTAGAGGTTATTTaGTTTTGGATTCCACGTAAA +
Preference number: 5 (lower is better)
Translates to: ELILNSPGARIQDSIELFLVEVI*FWIPRK
Trigger: TTTACGTGGAATCCAAAACAAAATAACCTCTACCAG...AAATAATTCAATAGAGTCCTGGATACGTGCACCAGGAGAGTTGAGAATTAGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000531148.5
CDS-3UTR CAA 90 bp ATGATACCTGAATGGCACTTCTTCCTGTGGAACATCCACATAGTAACGAATAAACTGGTAGAGGTTATTTaGTTTTGGATTCCACGTAAA +
Preference number: 5 (lower is better)
Translates to: MIPEWHFFLWNIHIVTNKLVEVI*FWIPRK
Trigger: TTTACGTGGAATCCAAAACAAAATAACCTCTACCAG...TTTATTCGTTACTATGTGGATGTTCCACAGGAAGAAGTGCCATTCAGGTATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000531148.5
CDS-3UTR CAA 90 bp ATGATTTTGAAAGATAAAGTCTGCAGCAGAAGGAGAATAGGCCTTATTCGTCTTTATTTCAGTCCAGTCTaGGAGGTTATTGTCTGTTAT +
Preference number: 5 (lower is better)
Translates to: MILKDKVCSRRRIGLIRLYFSPV*EVIVCY
Trigger: ATAACAGACAATAACCTCCAAGACTGGACTGAAATA...AAGACGAATAAGGCCTATTCTCCTTCTGCTGCAGACTTTATCTTTCAAAATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284259.11
ENST00000422003.6
CDS TCA 72 bp CCCCCACTCTGGCCGCCGGAGCCCAGTGTCCTGCATTaGCCCGGAAGCAGCTTTCCCGGCCCAACAACAACA +
Preference number: 6 (lower is better)
Translates to: PPLWPPEPSVLH*PGSSFPGPTTT
Trigger: TGTTGTTGTTGGGCCGGGAAAGCTGCTTCCGGGTCAATGCAGGACACTGGGCTCCGGCGGCCAGAGTGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529397.5
CDS GCA 72 bp CTAGTCCCCCACTCTGGCCGCCGGAGCCCAGTGTCCTaGATTGACCCGGAAGCAGCTTTCCCGGCCCAACAA +
Preference number: 6 (lower is better)
Translates to: LVPHSGRRSPVS*IDPEAAFPAQQ
Trigger: TTGTTGGGCCGGGAAAGCTGCTTCCGGGTCAATGCAGGACACTGGGCTCCGGCGGCCAGAGTGGGGGACTAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529397.5
CDS CAA 72 bp TCCCCCACTCTGGCCGCCGGAGCCCAGTGTCCTGCATaGACCCGGAAGCAGCTTTCCCGGCCCAACAACAAC +
Preference number: 6 (lower is better)
Translates to: SPTLAAGAQCPA*TRKQLSRPNNN
Trigger: GTTGTTGTTGGGCCGGGAAAGCTGCTTCCGGGTCAATGCAGGACACTGGGCTCCGGCGGCCAGAGTGGGGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529397.5
CDS CCA 72 bp GAGGCGATCTTTCATAGGAGAGCCCTGAGGTGTGGCTaGGACATGGACTCCCATCCCCGGGCCACGGCGATA +
Preference number: 6 (lower is better)
Translates to: EAIFHRRALRCG*DMDSHPRATAI
Trigger: TATCGCCGTGGCCCGGGGATGGGAGTCCATGTCCCAGCCACACCTCAGGGCTCTCCTATGAAAGATCGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000524726.1
ENST00000529397.5
ENST00000531148.5
ENST00000533712.5
ENST00000683345.1
CDS TCA 72 bp TCATGTGGACCGTCTCCCAAGAAGCTTTGCTGTTGTTaGGGACAAGTTTGCGAACCCCAGAGAAGGACCCAG +
Preference number: 6 (lower is better)
Translates to: SCGPSPKKLCCC*GQVCEPQRRTQ
Trigger: CTGGGTCCTTCTCTGGGGTTCGCAAACTTGTCCTCAACAACAGCAAAGCTTCTTGGGAGACGGTCCACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000524726.1
ENST00000529397.5
ENST00000533134.1
ENST00000533712.5
ENST00000683345.1
CDS CAA 90 bp ATGTGGACCGTCTCCCAAGAAGCTTTGCTGTTGTTGAGGACAAGTTaGCGAACCCCAGAGAAGGACCCAGCACATGTTCTTTCTCATGCC +
Preference number: 6 (lower is better)
Translates to: MWTVSQEALLLLRTS*RTPEKDPAHVLSHA
Trigger: GGCATGAGAAAGAACATGTGCTGGGTCCTTCTCTGGGGTTCGCAAACTTGTCCTCAACAACAGCAAAGCTTCTTGGGAGACGGTCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284259.11
ENST00000533134.1
ENST00000533712.5
CDS CAA 72 bp ATCATGTGGACCGTCTCCCAAGAAGCTTTGCTGTTGTaGAGGACAAGTTTGCGAACCCCAGAGAAGGACCCA +
Preference number: 6 (lower is better)
Translates to: IMWTVSQEALLL*RTSLRTPEKDP
Trigger: TGGGTCCTTCTCTGGGGTTCGCAAACTTGTCCTCAACAACAGCAAAGCTTCTTGGGAGACGGTCCACATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000524726.1
ENST00000529397.5
ENST00000533134.1
ENST00000533712.5
ENST00000683345.1
CDS CAA 90 bp TCCTGTAGTATCATGTGGACCGTCTCCCAAGAAGCTTTGCTGTTGTaGAGGACAAGTTTGCGAACCCCAGAGAAGGACCCAGCACATGTT +
Preference number: 6 (lower is better)
Translates to: SCSIMWTVSQEALLL*RTSLRTPEKDPAHV
Trigger: AACATGTGCTGGGTCCTTCTCTGGGGTTCGCAAACTTGTCCTCAACAACAGCAAAGCTTCTTGGGAGACGGTCCACATGATACTACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000524726.1
ENST00000529397.5
ENST00000533134.1
ENST00000533712.5
ENST00000683345.1
CDS CAA 90 bp AACTCCTGTAGTATCATGTGGACCGTCTCCCAAGAAGCTTTGCTGTaGTTGAGGACAAGTTTGCGAACCCCAGAGAAGGACCCAGCACAT +
Preference number: 6 (lower is better)
Translates to: NSCSIMWTVSQEALL*LRTSLRTPEKDPAH
Trigger: ATGTGCTGGGTCCTTCTCTGGGGTTCGCAAACTTGTCCTCAACAACAGCAAAGCTTCTTGGGAGACGGTCCACATGATACTACAGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000524726.1
ENST00000529397.5
ENST00000533134.1
ENST00000533712.5
ENST00000683345.1
CDS CAA 90 bp TCTGGTAACTCCTGTAGTATCATGTGGACCGTCTCCCAAGAAGCTTaGCTGTTGTTGAGGACAAGTTTGCGAACCCCAGAGAAGGACCCA +
Preference number: 6 (lower is better)
Translates to: SGNSCSIMWTVSQEA*LLLRTSLRTPEKDP
Trigger: TGGGTCCTTCTCTGGGGTTCGCAAACTTGTCCTCAACAACAGCAAAGCTTCTTGGGAGACGGTCCACATGATACTACAGGAGTTACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000524726.1
ENST00000529397.5
ENST00000533134.1
ENST00000533712.5
ENST00000683345.1
CDS CAA 72 bp GTCTCCCAAGAAGCTTTGCTGTTGTTGAGGACAAGTTaGCGAACCCCAGAGAAGGACCCAGCACATGTTCTT +
Preference number: 6 (lower is better)
Translates to: VSQEALLLLRTS*RTPEKDPAHVL
Trigger: AAGAACATGTGCTGGGTCCTTCTCTGGGGTTCGCAAACTTGTCCTCAACAACAGCAAAGCTTCTTGGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000524726.1
ENST00000529397.5
ENST00000533134.1
ENST00000533712.5
ENST00000683345.1
CDS CAA 72 bp AGTATCATGTGGACCGTCTCCCAAGAAGCTTTGCTGTaGTTGAGGACAAGTTTGCGAACCCCAGAGAAGGAC +
Preference number: 6 (lower is better)
Translates to: SIMWTVSQEALL*LRTSLRTPEKD
Trigger: GTCCTTCTCTGGGGTTCGCAAACTTGTCCTCAACAACAGCAAAGCTTCTTGGGAGACGGTCCACATGATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000524726.1
ENST00000529397.5
ENST00000533134.1
ENST00000533712.5
ENST00000683345.1
CDS CAA 72 bp TCCTGTAGTATCATGTGGACCGTCTCCCAAGAAGCTTaGCTGTTGTTGAGGACAAGTTTGCGAACCCCAGAG +
Preference number: 6 (lower is better)
Translates to: SCSIMWTVSQEA*LLLRTSLRTPE
Trigger: CTCTGGGGTTCGCAAACTTGTCCTCAACAACAGCAAAGCTTCTTGGGAGACGGTCCACATGATACTACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284259.11
ENST00000422003.6
ENST00000524726.1
ENST00000529397.5
ENST00000533134.1
ENST00000533712.5
ENST00000683345.1
CDS CAA 90 bp ATGTGGACCGTCTCCCAAGAAGCTTTGCTGTTGTTGAGGACAAGTTaGCGAACCCCAGAGAAGGACCCAGCACATGTTCTTTCTAAAACC +
Preference number: 6 (lower is better)
Translates to: MWTVSQEALLLLRTS*RTPEKDPAHVLSKT
Trigger: GGTTTTAGAAAGAACATGTGCTGGGTCCTTCTCTGGGGTTCGCAAACTTGTCCTCAACAACAGCAAAGCTTCTTGGGAGACGGTCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000422003.6
ENST00000524726.1
ENST00000529397.5
ENST00000683345.1
CDS CCA 72 bp AGGACTGCAAACTCTGGTAACTCCTGTAGTATCATGTaGACCGTCTCCCAAGAAGCTTTGCTGTTGTTGAGG +
Preference number: 6 (lower is better)
Translates to: RTANSGNSCSIM*TVSQEALLLLR
Trigger: CCTCAACAACAGCAAAGCTTCTTGGGAGACGGTCCACATGATACTACAGGAGTTACCAGAGTTTGCAGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533712.5
CDS CAA 72 bp TACAGGATACGAAACTGGGGGAACTTGCTTGGGTTTTaGTGGCCTTACCAGCGTGCTAAGTCATACTTTCTG +
Preference number: 6 (lower is better)
Translates to: YRIRNWGNLLGF*WPYQRAKSYFL
Trigger: CAGAAAGTATGACTTAGCACGCTGGTAAGGCCACAAAAACCCAAGCAAGTTCCCCCAGTTTCGTATCCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524726.1
CDS CCA 72 bp ACTCTACAGCCTTCCAGAGCAGTTTACAAACCACCCTaGCTAATAACCAGGGATTGCCAGAATGTTGAAACA +
Preference number: 6 (lower is better)
Translates to: TLQPSRAVYKPP*LITRDCQNVET
Trigger: TGTTTCAACATTCTGGCAATCCCTGGTTATTAGCCAGGGTGGTTTGTAAACTGCTCTGGAAGGCTGTAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524726.1
CDS CAA 72 bp TCTCTATTTACAGGATACGAAACTGGGGGAACTTGCTaGGGTTTTTGTGGCCTTACCAGCGTGCTAAGTCAT +
Preference number: 6 (lower is better)
Translates to: SLFTGYETGGTC*GFCGLTSVLSH
Trigger: ATGACTTAGCACGCTGGTAAGGCCACAAAAACCCAAGCAAGTTCCCCCAGTTTCGTATCCTGTAAATAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524726.1
CDS CAA 72 bp CTTATCTCTATTTACAGGATACGAAACTGGGGGAACTaGCTTGGGTTTTTGTGGCCTTACCAGCGTGCTAAG +
Preference number: 6 (lower is better)
Translates to: LISIYRIRNWGN*LGFLWPYQRAK
Trigger: CTTAGCACGCTGGTAAGGCCACAAAAACCCAAGCAAGTTCCCCCAGTTTCGTATCCTGTAAATAGAGATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524726.1
CDS GCA 72 bp TTATCTCTATTTACAGGATACGAAACTGGGGGAACTTaGTTGGGTTTTTGTGGCCTTACCAGCGTGCTAAGT +
Preference number: 6 (lower is better)
Translates to: LSLFTGYETGGT*LGFCGLTSVLS
Trigger: ACTTAGCACGCTGGTAAGGCCACAAAAACCCAAGCAAGTTCCCCCAGTTTCGTATCCTGTAAATAGAGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524726.1
CDS TCA 72 bp GTTTACAGAACAGATTACCCCCATTATCTGTGCTCTTaGGCAGCTACAGAAGCCATCATGTTAAGGAAAAGC +
Preference number: 6 (lower is better)
Translates to: VYRTDYPHYLCS*AATEAIMLRKS
Trigger: GCTTTTCCTTAACATGATGGCTTCTGTAGCTGCTCAAGAGCACAGATAATGGGGGTAATCTGTTCTGTAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524726.1
CDS CAA 90 bp ACTAACTTATCTCTATTTACAGGATACGAAACTGGGGGAACTTGCTaGGGTTTTTGTGGCCTTACCAGCGTGCTAAGTCATACTTTCTGT +
Preference number: 6 (lower is better)
Translates to: TNLSLFTGYETGGTC*GFCGLTSVLSHTFC
Trigger: ACAGAAAGTATGACTTAGCACGCTGGTAAGGCCACAAAAACCCAAGCAAGTTCCCCCAGTTTCGTATCCTGTAAATAGAGATAAGTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524726.1
CDS TCA 72 bp TATTCAAAGCAGGATCAGATACATTTACTCCTGAACTaGTGTCCCCAAACCAAATGTCCCCACACTGAGATT +
Preference number: 6 (lower is better)
Translates to: YSKQDQIHLLLN*CPQTKCPHTEI
Trigger: AATCTCAGTGTGGGGACATTTGGTTTGGGGACATCAGTTCAGGAGTAAATGTATCTGATCCTGCTTTGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524726.1
CDS GCA 72 bp GGAAATGAATTTAGTTTATCAATGTCTTCCCAGGACTaGAAACCCTTCTTCCCCATGTATTTTCAATCTGCA +
Preference number: 6 (lower is better)
Translates to: GNEFSLSMSSQD*KPFFPMYFQSA
Trigger: TGCAGATTGAAAATACATGGGGAAGAAGGGTTTGCAGTCCTGGGAAGACATTGATAAACTAAATTCATTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533134.1