Pregenerated sensors for TBC1D26 (Homo sapiens)
Ensembl gene IDs: ENSG00000214946Ensembl transcript IDs: ENST00000437605.3, ENST00000469477.3
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTGACATCCAGGATTCAGGAGAGCCTTCTGACTTGGGTGTGCATGAAAGTCACCTCCAGGAAAGCTTCATaGGGTGCTTCCTGTGTATTT | + |
|
Preference number: 2 (lower is better) Translates to: VTSRIQESLLTWVCMKVTSRKAS*GASCVF Trigger: AAATACACAGGAAGCACCTCATGAAGCTTTCCTGGA...GGTGACTTTCATGCACACCCAAGTCAGAAGGCTCTCCTGAATCCTGGATGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437605.3 ENST00000469477.3 |
||
| 3UTR-3UTR GCA 90 bp | GTGACATCCAGGATTCAGGAGAGCCTTCTGACTTGGGTGTGCATGAAAGTCACCGAAAGCTTCATGAGGTaGTTCCTGTGTATTTTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: VTSRIQESLLTWVCMKVTESFMR*FLCILN Trigger: ATTCAAAATACACAGGAAGCACCTCATGAAGCTTTC...GGTGACTTTCATGCACACCCAAGTCAGAAGGCTCTCCTGAATCCTGGATGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000437605.3 ENST00000469477.3 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCTATGCCAACAGTGAACAATATTTCATCTCTTTTTGTGACTGGTCTGCTGGAGAGCCTTCTGACTTaGGTGTGCATGAAAGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: SSMPTVNNISSLFVTGLLESLLT*VCMKVT Trigger: GGTGACTTTCATGCACACCCAAGTCAGAAGGCTCTC...CAGCAGACCAGTCACAAAAAGAGATGAAATATTGTTCACTGTTGGCATAGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469477.3 |
||
| 3UTR-3UTR TCA 90 bp | ATGCCAACAGTGAACAATATTTCATCTCTTTTTGTGACTGGTCTGCTGCTGGTTTCCAGGAAAGCTTCATaGGGTGCTTCCTGTGTATTT | + |
|
Preference number: 2 (lower is better) Translates to: MPTVNNISSLFVTGLLLVSRKAS*GASCVF Trigger: AAATACACAGGAAGCACCTCATGAAGCTTTCCTGGA...AACCAGCAGCAGACCAGTCACAAAAAGAGATGAAATATTGTTCACTGTTGGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469477.3 |
||
| 3UTR-3UTR GCA 90 bp | ATGCCAACAGTGAACAATATTTCATCTCTTTTTGTGACTGGTCTGCTGCTGGTTGAAAGCTTCATGAGGTaGTTCCTGTGTATTTTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: MPTVNNISSLFVTGLLLVESFMR*FLCILN Trigger: ATTCAAAATACACAGGAAGCACCTCATGAAGCTTTC...AACCAGCAGCAGACCAGTCACAAAAAGAGATGAAATATTGTTCACTGTTGGCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000469477.3 |
||
| CDS-3UTR GCA 90 bp | GTGACATCCAGGATTCAGGAGAGCCTTCTGACTTGGGTGTGCATGAAAGTCACCCAGGGCACACCGGCCTaGATGGGGGCATCCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VTSRIQESLLTWVCMKVTQGTPA*MGASLV Trigger: GACCAGGGATGCCCCCATGCAGGCCGGTGTGCCCTG...GGTGACTTTCATGCACACCCAAGTCAGAAGGCTCTCCTGAATCCTGGATGTCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000437605.3 |
||
| CDS-3UTR GCA 90 bp | GTGACATCCAGGATTCAGGAGAGCCTTCTGACTTGGGTGTGCATGAAAGTCACCGAATACCACAGGGAGTaGCTCTCACCAGCGAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VTSRIQESLLTWVCMKVTEYHRE*LSPASN Trigger: GTTGCTCGCTGGTGAGAGGCACTCCCTGTGGTATTC...GGTGACTTTCATGCACACCCAAGTCAGAAGGCTCTCCTGAATCCTGGATGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437605.3 ENST00000469477.3 |
||
| CDS-3UTR CCA 90 bp | GTGACATCCAGGATTCAGGAGAGCCTTCTGACTTGGGTGTGCATGAAAGTCACCTCACCAGCGAGCAACTaGGTAAGCGCCCAGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VTSRIQESLLTWVCMKVTSPASN*VSAQKA Trigger: TGCTTTCTGGGCGCTTACCCAGTTGCTCGCTGGTGA...GGTGACTTTCATGCACACCCAAGTCAGAAGGCTCTCCTGAATCCTGGATGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437605.3 ENST00000469477.3 |
||
| CDS-3UTR CCA 90 bp | GTGACATCCAGGATTCAGGAGAGCCTTCTGACTTGGGTGTGCATGAAAGTCACCGAGAGCCTTCTGACTTaGGTGTGCATGAAAGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VTSRIQESLLTWVCMKVTESLLT*VCMKVT Trigger: GGTGACTTTCATGCACACCCAAGTCAGAAGGCTCTC...GGTGACTTTCATGCACACCCAAGTCAGAAGGCTCTCCTGAATCCTGGATGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437605.3 ENST00000469477.3 |
||
| CDS-3UTR TCA 90 bp | GTGACATCCAGGATTCAGGAGAGCCTTCTGACTTGGGTGTGCATGAAAGTCACCTTTCATCTCTTTTTGTaGCTGGTCTGCTGCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTSRIQESLLTWVCMKVTFHLFL*LVCCWL Trigger: CAACCAGCAGCAGACCAGTCACAAAAAGAGATGAAA...GGTGACTTTCATGCACACCCAAGTCAGAAGGCTCTCCTGAATCCTGGATGTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000437605.3 ENST00000469477.3 |
||
| CDS-3UTR GCA 90 bp | GTGACATCCAGGATTCAGGAGAGCCTTCTGACTTGGGTGTGCATGAAAGTCACCGTGTCAGGAAGGCCATaGACTCACATTTCATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTSRIQESLLTWVCMKVTVSGRP*THISSL Trigger: AAGAGATGAAATGTGAGTGCATGGCCTTCCTGACAC...GGTGACTTTCATGCACACCCAAGTCAGAAGGCTCTCCTGAATCCTGGATGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437605.3 |
||
| CDS-3UTR TCA 90 bp | GTGACATCCAGGATTCAGGAGAGCCTTCTGACTTGGGTGTGCATGAAAGTCACCACTTTGTATACTCTTTaGGACAGCTTCTTGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTSRIQESLLTWVCMKVTTLYTL*DSFLVL Trigger: GAGCACCAAGAAGCTGTCTCAAAGAGTATACAAAGT...GGTGACTTTCATGCACACCCAAGTCAGAAGGCTCTCCTGAATCCTGGATGTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437605.3 ENST00000469477.3 |
||
| CDS-3UTR GCA 90 bp | GTGACATCCAGGATTCAGGAGAGCCTTCTGACTTGGGTGTGCATGAAAGTCACCCCTCCCGTAATAACTTaGAGTCTTTCCTATGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: VTSRIQESLLTWVCMKVTPPVIT*SLSYVI Trigger: TATAACATAGGAAAGACTGCAAGTTATTACGGGAGG...GGTGACTTTCATGCACACCCAAGTCAGAAGGCTCTCCTGAATCCTGGATGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437605.3 |
||
| CDS-3UTR CCA 90 bp | GTATTCCTCTATGCCAACAGTGAACAATATTTCATCTCTTTTTGTGACTGGTCTTCACCAGCGAGCAACTaGGTAAGCGCCCAGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VFLYANSEQYFISFCDWSSPASN*VSAQKA Trigger: TGCTTTCTGGGCGCTTACCCAGTTGCTCGCTGGTGA...AGACCAGTCACAAAAAGAGATGAAATATTGTTCACTGTTGGCATAGAGGAATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469477.3 |
||
| CDS-3UTR CCA 90 bp | GTATTCCTCTATGCCAACAGTGAACAATATTTCATCTCTTTTTGTGACTGGTCTGAGAGCCTTCTGACTTaGGTGTGCATGAAAGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VFLYANSEQYFISFCDWSESLLT*VCMKVT Trigger: GGTGACTTTCATGCACACCCAAGTCAGAAGGCTCTC...AGACCAGTCACAAAAAGAGATGAAATATTGTTCACTGTTGGCATAGAGGAATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469477.3 |
||
| CDS-3UTR TCA 90 bp | GTATTCCTCTATGCCAACAGTGAACAATATTTCATCTCTTTTTGTGACTGGTCTACTTTGTATACTCTTTaGGACAGCTTCTTGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VFLYANSEQYFISFCDWSTLYTL*DSFLVL Trigger: GAGCACCAAGAAGCTGTCTCAAAGAGTATACAAAGT...AGACCAGTCACAAAAAGAGATGAAATATTGTTCACTGTTGGCATAGAGGAATAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469477.3 |
||
| CDS-3UTR CAA 90 bp | GTGACATCCAGGATTCAGGAGAGCCTTCTGACTTGGGTGTGCATGAAAGTCACCATGCACAGCCCTTCCTaGCCCAGGTGTCTCATGATC | + |
|
Preference number: 5 (lower is better) Translates to: VTSRIQESLLTWVCMKVTMHSPS*PRCLMI Trigger: GATCATGAGACACCTGGGCAAGGAAGGGCTGTGCAT...GGTGACTTTCATGCACACCCAAGTCAGAAGGCTCTCCTGAATCCTGGATGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437605.3 ENST00000469477.3 |
||
| CDS-3UTR CAA 90 bp | GTGACATCCAGGATTCAGGAGAGCCTTCTGACTTGGGTGTGCATGAAAGTCACCCTGGTCTGCTGCTGGTaGACCCTCGTTCCTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VTSRIQESLLTWVCMKVTLVCCW*TLVPPF Trigger: AAAAGGAGGAACGAGGGTCAACCAGCAGCAGACCAG...GGTGACTTTCATGCACACCCAAGTCAGAAGGCTCTCCTGAATCCTGGATGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437605.3 ENST00000469477.3 |
||
| CDS-3UTR CAA 90 bp | GTGACATCCAGGATTCAGGAGAGCCTTCTGACTTGGGTGTGCATGAAAGTCACCACTTTCCTTGCGTCTTaGCTTCACCTCCAGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: VTSRIQESLLTWVCMKVTTFLAS*LHLQGT Trigger: AGTGCCCTGGAGGTGAAGCAAAGACGCAAGGAAAGT...GGTGACTTTCATGCACACCCAAGTCAGAAGGCTCTCCTGAATCCTGGATGTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437605.3 ENST00000469477.3 |
||
| CDS-3UTR CAA 90 bp | GTGACATCCAGGATTCAGGAGAGCCTTCTGACTTGGGTGTGCATGAAAGTCACCGACTTTGTATACTCTTaGAGACAGCTTCTTGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VTSRIQESLLTWVCMKVTDFVYS*RQLLGA Trigger: AGCACCAAGAAGCTGTCTCAAAGAGTATACAAAGTC...GGTGACTTTCATGCACACCCAAGTCAGAAGGCTCTCCTGAATCCTGGATGTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437605.3 ENST00000469477.3 |
||
| CDS-3UTR CAA 90 bp | GTGACATCCAGGATTCAGGAGAGCCTTCTGACTTGGGTGTGCATGAAAGTCACCCATAATTCCTGCTGCTaGACTCCGAATCTTTGTATG | + |
|
Preference number: 5 (lower is better) Translates to: VTSRIQESLLTWVCMKVTHNSCC*TPNLCM Trigger: CATACAAAGATTCGGAGTCAAGCAGCAGGAATTATG...GGTGACTTTCATGCACACCCAAGTCAGAAGGCTCTCCTGAATCCTGGATGTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437605.3 ENST00000469477.3 |
||
| CDS-3UTR CAA 90 bp | TCCTCTATGCCAACAGTGAACAATATTTCATCTCTTTTTGTGACTGGTCTGCTGCTGGTCTGCTGCTGGTaGACCCTCGTTCCTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSMPTVNNISSLFVTGLLLVCCW*TLVPPF Trigger: AAAAGGAGGAACGAGGGTCAACCAGCAGCAGACCAG...CAGCAGACCAGTCACAAAAAGAGATGAAATATTGTTCACTGTTGGCATAGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469477.3 |
||
| CDS-3UTR CAA 90 bp | TCCTCTATGCCAACAGTGAACAATATTTCATCTCTTTTTGTGACTGGTCTGCTGACTTTCCTTGCGTCTTaGCTTCACCTCCAGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SSMPTVNNISSLFVTGLLTFLAS*LHLQGT Trigger: AGTGCCCTGGAGGTGAAGCAAAGACGCAAGGAAAGT...CAGCAGACCAGTCACAAAAAGAGATGAAATATTGTTCACTGTTGGCATAGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469477.3 |
||
| CDS-3UTR CAA 90 bp | GTATTCCTCTATGCCAACAGTGAACAATATTTCATCTCTTTTTGTGACTGGTCTATGCACAGCCCTTCCTaGCCCAGGTGTCTCATGATC | + |
|
Preference number: 5 (lower is better) Translates to: VFLYANSEQYFISFCDWSMHSPS*PRCLMI Trigger: GATCATGAGACACCTGGGCAAGGAAGGGCTGTGCAT...AGACCAGTCACAAAAAGAGATGAAATATTGTTCACTGTTGGCATAGAGGAATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469477.3 |
||
| CDS-3UTR CAA 90 bp | TCCTCTATGCCAACAGTGAACAATATTTCATCTCTTTTTGTGACTGGTCTGCTGGACTTTGTATACTCTTaGAGACAGCTTCTTGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSMPTVNNISSLFVTGLLDFVYS*RQLLGA Trigger: AGCACCAAGAAGCTGTCTCAAAGAGTATACAAAGTC...CAGCAGACCAGTCACAAAAAGAGATGAAATATTGTTCACTGTTGGCATAGAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469477.3 |
||