RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBC1D2 (Homo sapiens)

Ensembl gene IDs: ENSG00000095383

Ensembl transcript IDs: ENST00000342112.9, ENST00000375063.5, ENST00000375064.5, ENST00000375066.6, ENST00000465784.7, ENST00000493589.2

Found 707 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGGAGGTGGCCAAGTCAGGCTTCCCCCTCCACCTCGTCCTCGCTaGCACAGCCCTCGGACACAGCTCTGCGCCGGGATGCCCGCCTCT +
Preference number: 1 (lower is better)
Translates to: RGGGQVRLPPPPRPR*HSPRTQLCAGMPAS
Trigger: AGAGGCGGGCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGTGGAGGGGGAAGCCTGACTTGGCCACCTCCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375064.5
3UTR GCA 90 bp CTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGATaGCCGCCTCTCCAGGTACTCTGCCTTAAGCTGCTCCAGCTCCCG +
Preference number: 1 (lower is better)
Translates to: LVLAGTALGHSSAPG*PPLQVLCLKLLQLP
Trigger: CGGGAGCTGGAGCAGCTTAAGGCAGAGTACCTGGAGAGGCGGGCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
3UTR CCA 90 bp CATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTaGTCCGTGCCTGACCTCCAGTGGGTCTGCCAGCCAAGGGTGAGG +
Preference number: 1 (lower is better)
Translates to: HVQGHMVMGHPGLGH*SVPDLQWVCQPRVR
Trigger: CCTCACCCTTGGCTGGCAGACCCACTGGAGGTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR TCA 90 bp GAAGAGGTGACGAAAGGGTGGCATCCCTGGGTAAGTAAGTGCCTATaGAGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCA +
Preference number: 1 (lower is better)
Translates to: EEVTKGWHPWVSKCL*RSSPTNGFAAHNVP
Trigger: TGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCTTCATAGGCACTTACTTACCCAGGGATGCCACCCTTTCGTCACCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR GCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTaGTCTGTGGAAGAGGTGACGAAAGGGTGGCATCCCTGGGTAAGT +
Preference number: 1 (lower is better)
Translates to: GYPIEAVLLLVYMPK*SVEEVTKGWHPWVS
Trigger: ACTTACCCAGGGATGCCACCCTTTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR GCA 90 bp GGGAGGTGGCCAAGTCAGGCTTCCCCCTCCACCTCGTCCTCGCTGGCACAGCCCGCCGCAGCTGTTTCATaGGGAAGGGGTTCATGTCAT +
Preference number: 2 (lower is better)
Translates to: GRWPSQASPSTSSSLAQPAAAVS*GRGSCH
Trigger: ATGACATGAACCCCTTCCGCATGAAACAGCTGCGGC...GGGCTGTGCCAGCGAGGACGAGGTGGAGGGGGAAGCCTGACTTGGCCACCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375064.5
3UTR-3UTR TCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGTCCAAGGTCACATGGTaGTGGGACACCCAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLSKVTW*WDTQGW
Trigger: CCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGA...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR GCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGGACCTCCAGTGGGTCTaGCAGCCAAGGGTGAGGAAG +
Preference number: 2 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLDLQWV*QPRVRK
Trigger: CTTCCTCACCCTTGGCTGGCAGACCCACTGGAGGTC...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR TCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGGCTCTGTGGAAGAGGTaGCGAAAGGGTGGCATCCCT +
Preference number: 2 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLALWKR*RKGGIP
Trigger: AGGGATGCCACCCTTTCGTCACCTCTTCCACAGAGC...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR GCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAAGACCTCCAGTGGGTCTaGCAGCCAAGGGTGAGGAAG +
Preference number: 2 (lower is better)
Translates to: GSALACLHAKVLCGRGDEDLQWV*QPRVRK
Trigger: CTTCCTCACCCTTGGCTGGCAGACCCACTGGAGGTC...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR GCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAATGGACCATGCGCAGCTaGCGCAGCTGTTTCATGCGG +
Preference number: 2 (lower is better)
Translates to: GSALACLHAKVLCGRGDEWTMRS*RSCFMR
Trigger: CCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCA...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
3UTR-3UTR CCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGCCTGACCTCCAGTaGGTCTGCCAGCCAAGGGTG +
Preference number: 2 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEEVPDLQ*VCQPRV
Trigger: CACCCTTGGCTGGCAGACCCACTGGAGGTCAGGCAC...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR TCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGATCCAAGGTCACATGGTaGTGGGACACCCAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: PYRGSALACLHAKVLCGRSKVTW*WDTQGW
Trigger: CCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGA...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR TCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGTCCAAGGTCACATGGTaGTGGGACACCCAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVSKVTW*WDTQGW
Trigger: CCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGA...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR TCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAAGCTCTGTGGAAGAGGTaGCGAAAGGGTGGCATCCCT +
Preference number: 2 (lower is better)
Translates to: GSALACLHAKVLCGRGDEALWKR*RKGGIP
Trigger: AGGGATGCCACCCTTTCGTCACCTCTTCCACAGAGC...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR CCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCGTGCCTGACCTCCAGTaGGTCTGCCAGCCAAGGGTG +
Preference number: 2 (lower is better)
Translates to: RECSRLPYRGSALACLHAVPDLQ*VCQPRV
Trigger: CACCCTTGGCTGGCAGACCCACTGGAGGTCAGGCAC...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR CCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGTGCCTGACCTCCAGTaGGTCTGCCAGCCAAGGGTG +
Preference number: 2 (lower is better)
Translates to: PRECSRLPYRGSALACLHVPDLQ*VCQPRV
Trigger: CACCCTTGGCTGGCAGACCCACTGGAGGTCAGGCAC...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR CCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGGAGGTGACGAAAGGGTaGCATCCCTGGGTAAGTAAG +
Preference number: 2 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLEVTKG*HPWVSK
Trigger: CTTACTTACCCAGGGATGCCACCCTTTCGTCACCTC...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR TCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACTCCAAGGTCACATGGTaGTGGGACACCCAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYSKVTW*WDTQGW
Trigger: CCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGA...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR TCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCGCTCTGTGGAAGAGGTaGCGAAAGGGTGGCATCCCT +
Preference number: 2 (lower is better)
Translates to: RECSRLPYRGSALACLHAALWKR*RKGGIP
Trigger: AGGGATGCCACCCTTTCGTCACCTCTTCCACAGAGC...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR GCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACGACCTCCAGTGGGTCTaGCAGCCAAGGGTGAGGAAG +
Preference number: 2 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYDLQWV*QPRVRK
Trigger: CTTCCTCACCCTTGGCTGGCAGACCCACTGGAGGTC...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR TCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACGCTCTGTGGAAGAGGTaGCGAAAGGGTGGCATCCCT +
Preference number: 2 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYALWKR*RKGGIP
Trigger: AGGGATGCCACCCTTTCGTCACCTCTTCCACAGAGC...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR GCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGGTTTACATGCCAAAGTaGTCTGTGGAAGAGGTGACG +
Preference number: 2 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLVYMPK*SVEEVT
Trigger: CGTCACCTCTTCCACAGAGCACTTTGGCATGTAAAC...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR TCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGGTAAGTAAGTGCCTATaGAGAAGTAGCCCAACCAAT +
Preference number: 2 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLVSKCL*RSSPTN
Trigger: ATTGGTTGGGCTACTTCTTCATAGGCACTTACTTAC...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR GCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCGTTTACATGCCAAAGTaGTCTGTGGAAGAGGTGACG +
Preference number: 2 (lower is better)
Translates to: RECSRLPYRGSALACLHAVYMPK*SVEEVT
Trigger: CGTCACCTCTTCCACAGAGCACTTTGGCATGTAAAC...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR GCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAATCTTGCTTGTTTACATaGCAAAGTGCTCTGTGGAAG +
Preference number: 2 (lower is better)
Translates to: GSALACLHAKVLCGRGDESCLFT*QSALWK
Trigger: CTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGA...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR CAA 90 bp TATAACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTaGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAAA +
Preference number: 2 (lower is better)
Translates to: YNLENVPGYPIEAVL*LVYMPKCSVEEVTK
Trigger: TTTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR GCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCTCTTGCTTGTTTACATaGCAAAGTGCTCTGTGGAAG +
Preference number: 2 (lower is better)
Translates to: RECSRLPYRGSALACLHASCLFT*QSALWK
Trigger: CTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGA...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR GCA 72 bp CCCGCAGCTCAGCCTCCAGCCGCTCCCGGTGGACCATaGGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGT +
Preference number: 3 (lower is better)
Translates to: PAAQPPAAPGGP*AAAAAVSCGRG
Trigger: ACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGGAGGCTGAGCTGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
3UTR GCA 72 bp CCTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTaGGCCGGGATGCCCGCCTCTCCAGGTACTCTGCCT +
Preference number: 3 (lower is better)
Translates to: PRPRWHSPRTQL*AGMPASPGTLP
Trigger: AGGCAGAGTACCTGGAGAGGCGGGCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
3UTR CCA 72 bp GGCCAAGTCAGGCTTCCCCCTCCACCTCGTCCTCGCTaGCACAGCCCTCGGACACAGCTCTGCGCCGGGATG +
Preference number: 3 (lower is better)
Translates to: GQVRLPPPPRPR*HSPRTQLCAGM
Trigger: CATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGTGGAGGGGGAAGCCTGACTTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375064.5
3UTR GCA 72 bp CTGGGCCACTGGTCCGTGCCTGACCTCCAGTGGGTCTaGCAGCCAAGGGTGAGGAAGGCTGTGGGGAGGGGA +
Preference number: 3 (lower is better)
Translates to: LGHWSVPDLQWV*QPRVRKAVGRG
Trigger: TCCCCTCCCCACAGCCTTCCTCACCCTTGGCTGGCAGACCCACTGGAGGTCAGGCACGGACCAGTGGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR CCA 72 bp GGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTaGTCCGTGCCTGACCTCCAGTGGGTCTGCCAGCCA +
Preference number: 3 (lower is better)
Translates to: GHMVMGHPGLGH*SVPDLQWVCQP
Trigger: TGGCTGGCAGACCCACTGGAGGTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR GCA 72 bp TCAGCCTCCAGCCGCTCCCGGTGGACCATGCGCAGCTaGCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCA +
Preference number: 3 (lower is better)
Translates to: SASSRSRWTMRS*RSCFMRKGFMS
Trigger: TGACATGAACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGGAGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
3UTR-3UTR CAA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGGCCCAACCAATGGCTTaGCAGCACACAATGTCCCAG +
Preference number: 3 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLAQPMA*QHTMSQ
Trigger: CTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGC...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR CAA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGCCCAACCAATGGCTTaGCAGCACACAATGTCCCAG +
Preference number: 3 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVAQPMA*QHTMSQ
Trigger: CTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGC...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR TCA 72 bp ACGAAAGGGTGGCATCCCTGGGTAAGTAAGTGCCTATaGAGAAGTAGCCCAACCAATGGCTTTGCAGCACAC +
Preference number: 3 (lower is better)
Translates to: TKGWHPWVSKCL*RSSPTNGFAAH
Trigger: GTGTGCTGCAAAGCCATTGGTTGGGCTACTTCTTCATAGGCACTTACTTACCCAGGGATGCCACCCTTTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR GCA 72 bp ATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTaGTCTGTGGAAGAGGTGACGAAAGGGTGGCATCCC +
Preference number: 3 (lower is better)
Translates to: IEAVLLLVYMPK*SVEEVTKGWHP
Trigger: GGGATGCCACCCTTTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR CAA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCGCCCAACCAATGGCTTaGCAGCACACAATGTCCCAG +
Preference number: 3 (lower is better)
Translates to: RECSRLPYRGSALACLHAAQPMA*QHTMSQ
Trigger: CTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGC...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR CAA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCCAACCAATGGCTTaGCAGCACACAATGTCCCAG +
Preference number: 3 (lower is better)
Translates to: PRECSRLPYRGSALACLHAQPMA*QHTMSQ
Trigger: CTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGC...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR-3UTR CAA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGATAGAGGCAGTGCTCTaGCTTGTTTACATGCCAAAG +
Preference number: 3 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLIEAVL*LVYMPK
Trigger: CTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTAT...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CTCCACCTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGATGCGACGCCCGCTTCTCCTaGTGGGCGGCCTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LHLVLAGTALGHSSAPGCDARFS*WAASSA
Trigger: GGCACTGGAGGCCGCCCAGCAGGAGAAGCGGGCGTC...GCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGTGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp TCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGATGCCCGCCTCTCCAGGGCTCCCGGTGGACCATaGGCAGCTGCCGCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SLAQPSDTALRRDARLSRAPGGP*AAAAAV
Trigger: AACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGC...CCTGGAGAGGCGGGCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR TCA 90 bp CCCCCTCCACCTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGTCCAAGGTCACATGGTaGTGGGACACCCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PPPPRPRWHSPRTQLCAGSKVTW*WDTQGW
Trigger: CCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGA...CCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGTGGAGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp CTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGATGCCCGCCTATCTGCCGCACTTTGTaGCGCACCAGCTCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LVLAGTALGHSSAPGCPPICRTL*RTSSSR
Trigger: CCGGCTGGAGCTGGTGCGGCACAAAGTGCGGCAGAT...AGGCGGGCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp ACCTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGATGCCCGCTGTAGCTCCTGCACCTaGTGCTCCCGCAGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: TSSSLAQPSDTALRRDARCSSCT*CSRRLA
Trigger: AGCGAGCCTGCGGGAGCAGCAGGTGCAGGAGCTACA...GCGGGCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp GGGAGGTGGCCAAGTCAGGCTTCCCCCTCCACCTCGTCCTCGCTGGCACAGCCCAGCTCTGCGCCGGGATaGCCGCCTCTCCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: GRWPSQASPSTSSSLAQPSSAPG*PPLQVL
Trigger: GAGTACCTGGAGAGGCGGGCATCCCGGCGCAGAGCT...GGGCTGTGCCAGCGAGGACGAGGTGGAGGGGGAAGCCTGACTTGGCCACCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp GGGGAGGTGGCCAAGTCAGGCTTCCCCCTCCACCTCGTCCTCGCTGGCACAGCCAGGGGTGGCAGGAGGTaGCGGCGGGCTGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: GEVAKSGFPLHLVLAGTARGGRR*RRAVVE
Trigger: TTCCACAACAGCCCGCCGGCACCTCCTGCCACCCCT...GGCTGTGCCAGCGAGGACGAGGTGGAGGGGGAAGCCTGACTTGGCCACCTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CCA 90 bp CCCCCTCCACCTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGTGCTGTCCAAGGGATTaGCATCCTGAGCGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: PPPPRPRWHSPRTQLCAGCCPRD*HPERSA
Trigger: CGCGGACCGCTCAGGATGCCAATCCCTTGGACAGCA...CCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGTGGAGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CCA 90 bp TCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGATGCCCGCCTCTCCAGGGGAGTGTGCAGGTGCTaGACACGGAGGTGGACCAGC +
Preference number: 4 (lower is better)
Translates to: SLAQPSDTALRRDARLSRGVCRC*TRRWTS
Trigger: GCTGGTCCACCTCCGTGTCCAGCACCTGCACACTCC...CCTGGAGAGGCGGGCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACCGCAGGCTCGCTGTGTaGGCCAGGCTCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDRRLAV*ARLSRS
Trigger: GGAGCGGGAGAGCCTGGCGCACACAGCGAGCCTGCG...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGGAGGTGGCCAAGTCAGGCTTCCCCCTCCACCTCGTCCTCGCTGGCACAGCCCTGCTGCTGTAGCTCCTaGACCTGCTGCTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GRWPSQASPSTSSSLAQPCCCSS*TCCSRR
Trigger: CCTGCGGGAGCAGCAGGTGCAGGAGCTACAGCAGCA...GGGCTGTGCCAGCGAGGACGAGGTGGAGGGGGAAGCCTGACTTGGCCACCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp GGGAGGTGGCCAAGTCAGGCTTCCCCCTCCACCTCGTCCTCGCTGGCACAGCCCTGCCCTAGCTCGAGGTaGAGGACGGGCCCATTCCCA +
Preference number: 4 (lower is better)
Translates to: GRWPSQASPSTSSSLAQPCPSSR*RTGPFP
Trigger: TGGGAATGGGCCCGTCCTGCACCTCGAGCTAGGGCA...GGGCTGTGCCAGCGAGGACGAGGTGGAGGGGGAAGCCTGACTTGGCCACCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CCA 90 bp CCAGCCGCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGACCAGCAGGGCAATaGCCGCCAGCCTGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: PAAPGGPCAAAAAVSCGRGPAGQ*PPACSG
Trigger: GCCTGAACAGGCTGGCGGCCATTGCCCTGCTGGTCC...CCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR TCA 90 bp CCAGCCGCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGCTGCCTCAGCAGCTCTaGGCACTCGCTGGCTTCGTC +
Preference number: 4 (lower is better)
Translates to: PAAPGGPCAAAAAVSCGRLPQQL*ALAGFV
Trigger: GACGAAGCCAGCGAGTGCTCAGAGCTGCTGAGGCAG...CCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR TCA 90 bp CCCCCTCCACCTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGCAGGTGGTGGGATCGTaGCTCCAATGCCTGGATCTT +
Preference number: 4 (lower is better)
Translates to: PPPPRPRWHSPRTQLCAGQVVGS*LQCLDL
Trigger: AAGATCCAGGCATTGGAGTCACGATCCCACCACCTG...CCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGTGGAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACCTGCCAGCCGGAGACTaGGGAGGGACGAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHLPAGD*GGTRGP
Trigger: CGGACCCCTCGTCCCTCCGCAGTCTCCGGCTGGCAG...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CTCCACCTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGATGCCTGGGCGGCCTCCAGTaGCTTGTGCAGGATCTTCAC +
Preference number: 4 (lower is better)
Translates to: LHLVLAGTALGHSSAPGCLGGLQ*LVQDLH
Trigger: GTGAAGATCCTGCACAAGGCACTGGAGGCCGCCCAG...GCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACCGCAGGCTCGCTGTGTaGGCCAGGCTCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHRRLAV*ARLSRS
Trigger: GGAGCGGGAGAGCCTGGCGCACACAGCGAGCCTGCG...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATCCCCCAGGGCCTCCTaGAGCCTTCTCAGACCGGCC +
Preference number: 4 (lower is better)
Translates to: APGGPCAAAAAVSCGRGSSPRAS*SLLRPA
Trigger: GGCCGGTCTGAGAAGGCTGCAGGAGGCCCTGGGGGA...TGAACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp AGCCTCCAGCCGCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGCCGATGGTGGGGTTCTaGCAGGAGAAGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLQPLPVDHAQLPQLFHAPMVGF*QEKASS
Trigger: GCTGCTGGCCTTCTCCTGGCAGAACCCCACCATCGG...CGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGGAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp CTCCACCTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGATGCTGGACCATGCGCAGCTaGCGCAGCTGTTTCATGCGG +
Preference number: 4 (lower is better)
Translates to: LHLVLAGTALGHSSAPGCWTMRS*RSCFMR
Trigger: CCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCA...GCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp CTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGATGCCCGCCTTCCCAGCGCTTCATCTaGAGCTGCTGCAGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: LVLAGTALGHSSAPGCPPSQRFI*SCCSQY
Trigger: GTACTGGCTGCAGCAGCTGCAGATGAAGCGCTGGGA...AGGCGGGCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CCA 90 bp TCAGCCTCCAGCCGCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCCGCCAGGTATGCGCTaGACGCCCGCTTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SASSRSRWTMRSCRSCFMPPGMR*TPASPA
Trigger: AGCAGGAGAAGCGGGCGTCCAGCGCATACCTGGCGG...CATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGGAGGCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CCA 90 bp GGGAGGTGGCCAAGTCAGGCTTCCCCCTCCACCTCGTCCTCGCTGGCACAGCCCCACTGCAGTGCCTCCTaGACAAGCTGCCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GRWPSQASPSTSSSLAQPHCSAS*TSCLSS
Trigger: GCTGCTGAGGCAGCTTGTCCAGGAGGCACTGCAGTG...GGGCTGTGCCAGCGAGGACGAGGTGGAGGGGGAAGCCTGACTTGGCCACCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CCA 90 bp GGGGAGGTGGCCAAGTCAGGCTTCCCCCTCCACCTCGTCCTCGCTGGCACAGCCAGGCCCAGCAGGTGGTaGGATCGTGACTCCAATGCC +
Preference number: 4 (lower is better)
Translates to: GEVAKSGFPLHLVLAGTARPSRW*DRDSNA
Trigger: GGCATTGGAGTCACGATCCCACCACCTGCTGGGCCT...GGCTGTGCCAGCGAGGACGAGGTGGAGGGGGAAGCCTGACTTGGCCACCTCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp CTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGATGCCCGCCTCCTGGGCCTGCTTGTTaGCACGGATGTTGTGCATTG +
Preference number: 4 (lower is better)
Translates to: LVLAGTALGHSSAPGCPPPGPAC*HGCCAL
Trigger: CAATGCACAACATCCGTGGCAACAAGCAGGCCCAGG...AGGCGGGCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACGCTCTCTCCCTGGGGTaGTGGCGTCAGAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDALSLG*WRQRPR
Trigger: CCTTGGCCTCTGACGCCAGCACCCCAGGGAGAGAGC...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCCCCTCCACCTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGCAGAGAAGGCTTGGGTaGAGGCTTTGGAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: PPPPRPRWHSPRTQLCAGQRRLG*RLWRIL
Trigger: GAGGATTCTCCAAAGCCTGCACCCAAGCCTTCTCTG...CCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGTGGAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp TCGGACACAGCTCTGCGCCGGGATGCCCGCCTCTCCAGGTACTCTGCCTTAAGCAGCTCCTGCACCTGCTaGTCCCGCAGGCTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: SDTALRRDARLSRYSALSSSCTC*SRRLAV
Trigger: CACAGCGAGCCTGCGGGAGCAGCAGGTGCAGGAGCT...GCTTAAGGCAGAGTACCTGGAGAGGCGGGCATCCCGGCGCAGAGCTGTGTCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp TCGGACACAGCTCTGCGCCGGGATGCCCGCCTCTCCAGGTACTCTGCCTTAAGCCCTGCCCGCAGTAGCTaGTTGAGCTCGGCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: SDTALRRDARLSRYSALSPARSS*LSSAEG
Trigger: GCCCTCAGCCGAGCTCAAGCAGCTACTGCGGGCAGG...GCTTAAGGCAGAGTACCTGGAGAGGCGGGCATCCCGGCGCAGAGCTGTGTCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACCCTCGGACACAGCTCTaGGCCGGGATGCCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHPRTQL*AGMPAS
Trigger: AGAGGCGGGCATCCCGGCGCAGAGCTGTGTCCGAGG...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCAGCCGCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGACCTCCAGTGGGTCTaGCAGCCAAGGGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PAAPGGPCAAAAAVSCGRDLQWV*QPRVRK
Trigger: CTTCCTCACCCTTGGCTGGCAGACCCACTGGAGGTC...CCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CCA 90 bp AGCCTCCAGCCGCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGTCATGGCCTGTTCCCTaGGCCTGCTTGTTGCCACGG +
Preference number: 4 (lower is better)
Translates to: SLQPLPVDHAQLPQLFHASWPVP*ACLLPR
Trigger: CCGTGGCAACAAGCAGGCCCAGGGAACAGGCCATGA...CGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGGAGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CCA 90 bp GGGGAGGTGGCCAAGTCAGGCTTCCCCCTCCACCTCGTCCTCGCTGGCACAGCCGCTGCCACTTTCTCCTaGGCAGTTCGGTTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: GEVAKSGFPLHLVLAGTAAATFS*AVRFRV
Trigger: CACACGGAACCGAACTGCCCAGGAGAAAGTGGCAGC...GGCTGTGCCAGCGAGGACGAGGTGGAGGGGGAAGCCTGACTTGGCCACCTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CCA 90 bp AGCTCTGCGCCGGGATGCCCGCCTCTCCAGGTACTCTGCCTTAAGCTGCTCCAGGCTCTGAGCACTCGCTaGCTTCGTCCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SSAPGCPPLQVLCLKLLQALSTR*LRPPGP
Trigger: AGGCCCTGGGGGACGAAGCCAGCGAGTGCTCAGAGC...CTGGAGCAGCTTAAGGCAGAGTACCTGGAGAGGCGGGCATCCCGGCGCAGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACGGACCAGCAGGGCAATaGCCGCCAGCCTGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDGPAGQ*PPACSG
Trigger: GCCTGAACAGGCTGGCGGCCATTGCCCTGCTGGTCC...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp TCAGCCTCCAGCCGCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGAGGGAGAGATCCACGTaGTGCTGCCCCAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: SASSRSRWTMRSCRSCFMRERST*CCPRWA
Trigger: GGCCCATCTGGGGCAGCACCACGTGGATCTCTCCCT...CATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGGAGGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACCCACCTCGTCCTCGCTaGCACAGCCCTCGGACACAG +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDPPRPR*HSPRTQ
Trigger: CTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGTGG...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp ACCTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGATGCCCGCTTGAGGGAAATATTCTaGAGGGCAGGGAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TSSSLAQPSDTALRRDARLREIF*RAGKGC
Trigger: GCAGCCCTTCCCTGCCCTTCAGAATATTTCCCTCAA...GCGGGCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR TCA 90 bp AGCTCTGCGCCGGGATGCCCGCCTCTCCAGGTACTCTGCCTTAAGCTGCTCCAGCTGCTTGAGCTCGGCTaGGGGCACAAGATCGCCCAG +
Preference number: 4 (lower is better)
Translates to: SSAPGCPPLQVLCLKLLQLLELG*GHKIAQ
Trigger: CTGGGCGATCTTGTGCCCTCAGCCGAGCTCAAGCAG...CTGGAGCAGCTTAAGGCAGAGTACCTGGAGAGGCGGGCATCCCGGCGCAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp GGTGGCCAAGTCAGGCTTCCCCCTCCACCTCGTCCTCGCTGGCACAGCCCTCGGTGCTCTATCTTCCCCTaGTGGCTCAGGAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GGQVRLPPPPRPRWHSPRCSIFP*WLRKSL
Trigger: CAGGGACTTCCTGAGCCAGCAGGGGAAGATAGAGCA...CCGAGGGCTGTGCCAGCGAGGACGAGGTGGAGGGGGAAGCCTGACTTGGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp CGCCGGGATGCCCGCCTCTCCAGGTACTCTGCCTTAAGCTGCTCCAGCTCCCGCAGCTTCCCACTGCAGTaGCTCCTGGACAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RRDARLSRYSALSCSSSRSFPLQ*LLDKLP
Trigger: AGGCAGCTTGTCCAGGAGGCACTGCAGTGGGAAGCT...GCGGGAGCTGGAGCAGCTTAAGGCAGAGTACCTGGAGAGGCGGGCATCCCGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACCCGATGGTGGGGTTCTaGCAGGAGAAGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDPMVGF*QEKASS
Trigger: GCTGCTGGCCTTCTCCTGGCAGAACCCCACCATCGG...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACGCTCCCGGTGGACCATaGGCAGCTGCCGCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHAPGGP*AAAAAV
Trigger: AACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGC...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGATGCCCGCCTTTCATCTGCAGCTGCTaGAGCCAGTACAGCATCGCT +
Preference number: 4 (lower is better)
Translates to: LVLAGTALGHSSAPGCPPFICSC*SQYSIA
Trigger: AGCGATGCTGTACTGGCTGCAGCAGCTGCAGATGAA...AGGCGGGCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACCGGAGGCGGCACCTGTaGATCCCTGGCAGACTCTTC +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDRRRHL*IPGRLF
Trigger: GAAGAGTCTGCCAGGGATCCACAGGTGCCGCCTCCG...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACCCGCCAGGTATGCGCTaGACGCCCGCTTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHPPGMR*TPASPA
Trigger: AGCAGGAGAAGCGGGCGTCCAGCGCATACCTGGCGG...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp ACCTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGATGCCCGCTCTATCTTCCCCTGCTaGCTCAGGAAGTCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: TSSSLAQPSDTALRRDARSIFPC*LRKSLL
Trigger: CAACAGGGACTTCCTGAGCCAGCAGGGGAAGATAGA...GCGGGCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACGCTCTGAGCACTCGCTaGCTTCGTCCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHALSTR*LRPPGP
Trigger: AGGCCCTGGGGGACGAAGCCAGCGAGTGCTCAGAGC...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACAGGTCCAGCTCAATCTaGCGGGCAGCAGGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDRSSSI*RAAGCS
Trigger: CGAGCACCCTGCTGCCCGCCAGATTGAGCTGGACCT...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTCCGAGAGCAGGTCCTaGAGCACCCGCTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHSESRS*STRWST
Trigger: GGTGGACCAGCGGGTGCTCCAGGACCTGCTCTCGGA...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGCTCTGCGCCGGGATGCCCGCCTCTCCAGGTACTCTGCCTTAAGCTGCTCCAGGTGCCTGACCTCCAGTaGGTCTGCCAGCCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: SSAPGCPPLQVLCLKLLQVPDLQ*VCQPRV
Trigger: CACCCTTGGCTGGCAGACCCACTGGAGGTCAGGCAC...CTGGAGCAGCTTAAGGCAGAGTACCTGGAGAGGCGGGCATCCCGGCGCAGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR TCA 90 bp TCAGCCTCCAGCCGCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCCCGGCTGGGAGTCTTaGTTTCGAAGATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SASSRSRWTMRSCRSCFMPGWES*FRRSPP
Trigger: AGGAGGGGATCTTCGAAATCAAGACTCCCAGCCGGG...CATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGGAGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR TCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACCTGCCTCAGCAGCTCTaGGCACTCGCTGGCTTCGTC +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHLPQQL*ALAGFV
Trigger: GACGAAGCCAGCGAGTGCTCAGAGCTGCTGAGGCAG...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACCTCGATGCTGTCAGATaGGGCCTCCCCAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDLDAVR*GLPSFP
Trigger: TGGGAAGCTGGGGAGGCCTCATCTGACAGCATCGAG...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACCTGCTTGAGCTCGGCTaGGGGCACAAGATCGCCCAG +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHLLELG*GHKIAQ
Trigger: CTGGGCGATCTTGTGCCCTCAGCCGAGCTCAAGCAG...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACCCCGCAGTAGCTGCTTaGGCTCGGCTGAGGGCACAA +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHPAVAA*ARLRAQ
Trigger: TTGTGCCCTCAGCCGAGCTCAAGCAGCTACTGCGGG...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CTCCACCTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGATGCAGTAATCAGCGGGCATaGTGGTCTCCACAATGGCCA +
Preference number: 4 (lower is better)
Translates to: LHLVLAGTALGHSSAPGCSNQRA*WSPQWP
Trigger: TGGCCATTGTGGAGACCATCATGCCCGCTGATTACT...GCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp CCCCCTCCACCTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGCTTACAGTCAAACACTaGACTGGAGAGGTCGATGCT +
Preference number: 4 (lower is better)
Translates to: PPPPRPRWHSPRTQLCAGLTVKH*TGEVDA
Trigger: AGCATCGACCTCTCCAGTGCAGTGTTTGACTGTAAG...CCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGTGGAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp TGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCATTGCGCAGGCTCGCTGTGTaGGCCAGGCTCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: WTMRSCRSCFMRKGFMSLRRLAV*ARLSRS
Trigger: GGAGCGGGAGAGCCTGGCGCACACAGCGAGCCTGCG...CAATGACATGAACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGTAGCTCCTGCACCTaGTGCTCCCGCAGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHCSSCT*CSRRLA
Trigger: AGCGAGCCTGCGGGAGCAGCAGGTGCAGGAGCTACA...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACAGCAGCTGCACGTGCTaGTGTAGCTCCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDSSCTC*CSSCTC
Trigger: GCAGGTGCAGGAGCTACAGCAGCACGTGCAGCTGCT...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CTCCACCTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGATGCTTGCAGATGACCTGCTaGTTGGCGTGGTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LHLVLAGTALGHSSAPGCLQMTC*LAWFLS
Trigger: GGACAAGAACCACGCCAAGCAGCAGGTCATCTGCAA...GCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACTGGGGCTCAGCTCGATaGTGTCAGATGAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDWGSAR*CQMRPP
Trigger: GGGAGGCCTCATCTGACAGCATCGAGCTGAGCCCCA...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp TCAGCCTCCAGCCGCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGAGCTCTGCCTCTTCTTaGCCTAGCTCGAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SASSRSRWTMRSCRSCFMSSASS*PSSRCR
Trigger: CCTGCACCTCGAGCTAGGGCAAGAAGAGGCAGAGCT...CATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGGAGGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACTCATGGCCTGTTCCCTaGGCCTGCTTGTTGCCACGG +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDSWPVP*ACLLPR
Trigger: CCGTGGCAACAAGCAGGCCCAGGGAACAGGCCATGA...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACTCAGGAAGTCCCTGTTaGCAGCGTCGGGGCGCAAAG +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDSGSPC*QRRGAK
Trigger: CTTTGCGCCCCGACGCTGCCAACAGGGACTTCCTGA...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACCACTGCAGTGCCTCCTaGACAAGCTGCCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDHCSAS*TSCLSS
Trigger: GCTGCTGAGGCAGCTTGTCCAGGAGGCACTGCAGTG...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACCAGAGAGCTTGCAGATaGCCTGCTGCTTGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDQRACR*PAAWRG
Trigger: ACCACGCCAAGCAGCAGGTCATCTGCAAGCTCTCTG...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AGCTCTGCGCCGGGATGCCCGCCTCTCCAGGTACTCTGCCTTAAGCTGCTCCAGGGTGGATCTCGGAGTTaGGGAAGCAGTTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SSAPGCPPLQVLCLKLLQGGSRS*GSSSGS
Trigger: GGACCCAGAACTGCTTCCTCAACTCCGAGATCCACC...CTGGAGCAGCTTAAGGCAGAGTACCTGGAGAGGCGGGCATCCCGGCGCAGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR TCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACGGTGGATCTCGGAGTTaGGGAAGCAGTTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDGGSRS*GSSSGS
Trigger: GGACCCAGAACTGCTTCCTCAACTCCGAGATCCACC...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CTCCACCTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGATGCTTCTCCAGATCTTTGTaGCCTGGTGGATCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: LHLVLAGTALGHSSAPGCFSRSL*PGGSRS
Trigger: ACTCCGAGATCCACCAGGTCACAAAGATCTGGAGAA...GCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR TCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACGCTCTGTGGAAGAGGTaGCGAAAGGGTGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDALWKR*RKGGIP
Trigger: AGGGATGCCACCCTTTCGTCACCTCTTCCACAGAGC...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACAGCTTCCCACTGCAGTaGCTCCTGGACAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDSFPLQ*LLDKLP
Trigger: AGGCAGCTTGTCCAGGAGGCACTGCAGTGGGAAGCT...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACCTGGTCCACCTGGGATaGCGTCAGCGTGTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDLVHLG*RQRVAV
Trigger: TACTGCAACACGCTGACGGCATCCCAGGTGGACCAG...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGACCATGCGCAGCTaGCGCAGCTGTTTCATGCGG +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHWTMRS*RSCFMR
Trigger: CCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCA...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCATTCCTCGGACACAGCTCTaGGCCGGGATGCCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: VDHAQLPQLFHAEGVHVIPRTQL*AGMPAS
Trigger: AGAGGCGGGCATCCCGGCGCAGAGCTGTGTCCGAGG...AATGACATGAACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACCAGTACAGCATCGCTTaGTTGGTGGCGGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDQYSIA*LVAAFR
Trigger: CCTGAAGGCCGCCACCAAGCAAGCGATGCTGTACTG...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACAGCTCTGCCTCTTCTTaGCCTAGCTCGAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDSSASS*PSSRCR
Trigger: CCTGCACCTCGAGCTAGGGCAAGAAGAGGCAGAGCT...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACACCCACAGAGTTTCTTaGGGACCGCCTCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHTHRVS*GPPPGT
Trigger: GGTCCCTGGAGGCGGTCCCCAAGAAACTCTGTGGGT...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACATTTCCAGCCCCGGATaGGCCCTTTGCCGCCGAACT +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHISSPG*ALCRRT
Trigger: AGTTCGGCGGCAAAGGGCCCATCCGGGGCTGGAAAT...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGGAGGTGGCCAAGTCAGGCTTCCCCCTCCACCTCGTCCTCGCTGGCACAGCCCAGTCAAACACTGCACTaGAGAGGTCGATGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GRWPSQASPSTSSSLAQPSQTLH*RGRCCP
Trigger: TGGACAGCATCGACCTCTCCAGTGCAGTGTTTGACT...GGGCTGTGCCAGCGAGGACGAGGTGGAGGGGGAAGCCTGACTTGGCCACCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CCA 90 bp CCAGCCGCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGCTTGGGTGCAGGCTTTaGAGAATCCTCTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: PAAPGGPCAAAAAVSCGRLGCRL*RILWLS
Trigger: AGAGAGCCAGAGGATTCTCCAAAGCCTGCACCCAAG...CCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CCA 90 bp GCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCACCACCTGGCAGTTTCTaGCTTGGAGGTAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: APGGPCAAAAAVSCGRGSPPGSF*LGGRRT
Trigger: AGTGCGCCTACCTCCAAGCCAGAAACTGCCAGGTGG...TGAACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CCA 90 bp GGGGAGGTGGCCAAGTCAGGCTTCCCCCTCCACCTCGTCCTCGCTGGCACAGCCTACTTGCTTTCCACCTaGCAGTTTCTGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GEVAKSGFPLHLVLAGTAYLLST*QFLAWR
Trigger: CCTCCAAGCCAGAAACTGCCAGGTGGAAAGCAAGTA...GGCTGTGCCAGCGAGGACGAGGTGGAGGGGGAAGCCTGACTTGGCCACCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR TCA 90 bp ACCTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGATGCCCGCTTCACTAGCTCCTTCTaGGACTTTAACTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: TSSSLAQPSDTALRRDARFTSSF*DFNSLV
Trigger: CACCAAGGAGTTAAAGTCTCAGAAGGAGCTAGTGAA...GCGGGCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR TCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACCAGGTGGTGGGATCGTaGCTCCAATGCCTGGATCTT +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDQVVGS*LQCLDL
Trigger: AAGATCCAGGCATTGGAGTCACGATCCCACCACCTG...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACCCTGGGCCTGCTTGTTaGCACGGATGTTGTGCATTG +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDPGPAC*HGCCAL
Trigger: CAATGCACAACATCCGTGGCAACAAGCAGGCCCAGG...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACCCTGTTCCCTGGGCCTaGTTGTTGCCACGGATGTTG +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHPVPWA*LLPRML
Trigger: CAACATCCGTGGCAACAAGCAGGCCCAGGGAACAGG...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACCTGTTGCTCCAAGGCTaGCACTTTCTCCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDLLLQG*HFLLGS
Trigger: ACTGCCCAGGAGAAAGTGGCAGCCTTGGAGCAACAG...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCAGACCGGCCAGGTACTTaGTTTCCACCTGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: APGGPCAAAAAVSCGRGSDRPGT*FPPGSF
Trigger: GAAACTGCCAGGTGGAAAGCAAGTACCTGGCCGGTC...TGAACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACCTGGTCCACCTGGGATaGCGTCAGCGTGTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHLVHLG*RQRVAV
Trigger: TACTGCAACACGCTGACGGCATCCCAGGTGGACCAG...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATACTCTGCCTTAAGCTaGTCCAGCTCCCGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: APGGPCAAAAAVSCGRGSYSALS*SSSRSS
Trigger: TGAGCTGCGGGAGCTGGAGCAGCTTAAGGCAGAGTA...TGAACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACTACTCTGCCTTAAGCTaGTCCAGCTCCCGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDYSALS*SSSRSS
Trigger: TGAGCTGCGGGAGCTGGAGCAGCTTAAGGCAGAGTA...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTCGAGGCCCAGCAGGTaGTGGGATCGTGACTCCAAT +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHSRPSR*WDRDSN
Trigger: ATTGGAGTCACGATCCCACCACCTGCTGGGCCTCGA...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCATTCCCGCAGTAGCTGCTTaGGCTCGGCTGAGGGCACAA +
Preference number: 4 (lower is better)
Translates to: VDHAQLPQLFHAEGVHVIPAVAA*ARLRAQ
Trigger: TTGTGCCCTCAGCCGAGCTCAAGCAGCTACTGCGGG...AATGACATGAACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR TCA 90 bp GCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATGGAGATGGTCTTGGTaGAGAAGCGCAGGTACTGGT +
Preference number: 4 (lower is better)
Translates to: APGGPCAAAAAVSCGRGSWRWSW*RSAGTG
Trigger: ACCAGTACCTGCGCTTCTTCACCAAGACCATCTCCA...TGAACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACCCCGGATGGGCCCTTTaGCGCCGAACTTACTTAAAT +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDPGWAL*RRTYLN
Trigger: ATTTAAGTAAGTTCGGCGGCAAAGGGCCCATCCGGG...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCCCCTCCACCTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGTTGCCACGGATGTTGTaGATTGTGTTCTGTATTTCA +
Preference number: 4 (lower is better)
Translates to: PPPPRPRWHSPRTQLCAGLPRML*IVFCIS
Trigger: TGAAATACAGAACACAATGCACAACATCCGTGGCAA...CCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGTGGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACAGCTTGCAGATGACCTaGTGCTTGGCGTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDSLQMT*CLAWFL
Trigger: CAAGAACCACGCCAAGCAGCAGGTCATCTGCAAGCT...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACGCCGCAGCTGTTTCATaGGGAAGGGGTTCATGTCAT +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDAAAVS*GRGSCH
Trigger: ATGACATGAACCCCTTCCGCATGAAACAGCTGCGGC...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACACCTGCTGCTTGGCGTaGTTCTTGTCCATAAGCAGC +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDTCCLA*FLSISS
Trigger: GCTGCTTATGGACAAGAACCACGCCAAGCAGCAGGT...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACCGTGACTCCAATGCCTaGATCTTGGCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHRDSNA*ILASSF
Trigger: GAAGCTGCTGGCCAAGATCCAGGCATTGGAGTCACG...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGTCCAGCCGCTCCCGGTaGACCATGCGCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLSSRSR*TMRSCR
Trigger: GCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGGA...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp TCGGACACAGCTCTGCGCCGGGATGCCCGCCTCTCCAGGTACTCTGCCTTAAGCGAGGTGACGAAAGGGTaGCATCCCTGGGTAAGTAAG +
Preference number: 4 (lower is better)
Translates to: SDTALRRDARLSRYSALSEVTKG*HPWVSK
Trigger: CTTACTTACCCAGGGATGCCACCCTTTCGTCACCTC...GCTTAAGGCAGAGTACCTGGAGAGGCGGGCATCCCGGCGCAGAGCTGTGTCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR TCA 90 bp CGCCGGGATGCCCGCCTCTCCAGGTACTCTGCCTTAAGCTGCTCCAGCTCCCGCCAGTTCGGTTCCGTGTaGTTCCTTCAGAAAAGAATG +
Preference number: 4 (lower is better)
Translates to: RRDARLSRYSALSCSSSRQFGSV*FLQKRM
Trigger: CATTCTTTTCTGAAGGAATCACACGGAACCGAACTG...GCGGGAGCTGGAGCAGCTTAAGGCAGAGTACCTGGAGAGGCGGGCATCCCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR TCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACACTCATCATACTTACTaGTGGGGCTCAGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDTHHTY*WGSARC
Trigger: GCATCGAGCTGAGCCCCATCAGTAAGTATGATGAGT...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACAGTAATCAGCGGGCATaGTGGTCTCCACAATGGCCA +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHSNQRA*WSPQWP
Trigger: TGGCCATTGTGGAGACCATCATGCCCGCTGATTACT...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACAGGGGTTCATGTCATTaGAGGCGATGTTCATCAGCG +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDRGSCH*RRCSSA
Trigger: CGCTGATGAACATCGCCTTCAATGACATGAACCCCT...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACCACTGGAGAGGTCGATaGTGTCCAAGGGATTGGCAT +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHHWRGR*CPRDWH
Trigger: ATGCCAATCCCTTGGACAGCATCGACCTCTCCAGTG...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGAGCCGCCGCCAGGTATaGGCTGGACGCCCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLSRRQV*AGRPLL
Trigger: GAGAAGCGGGCGTCCAGCGCATACCTGGCGGCGGCT...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACAGCTTGCAGATGACCTaGTGCTTGGCGTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHSLQMT*CLAWFL
Trigger: CAAGAACCACGCCAAGCAGCAGGTCATCTGCAAGCT...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACATGTCATCCTTCAGGTaGTCTATCTTCCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDMSSFR*SIFPCW
Trigger: CCAGCAGGGGAAGATAGAGCACCTGAAGGATGACAT...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGCAGGGGCAGAGGAGCTaGACTCCGGGGCGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLQGQRS*TPGRSP
Trigger: GGGAGAACGCCCCGGAGTCCAGCTCCTCTGCCCCTG...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGAGAATCTTCCCCTaGAGGTTCATGGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHWRIFP*RFMACS
Trigger: GGAACAGGCCATGAACCTCCAGGGGAAGATTCTCCA...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACACCTGCTGCTTGGCGTaGTTCTTGTCCATAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHTCCLA*FLSISS
Trigger: GCTGCTTATGGACAAGAACCACGCCAAGCAGCAGGT...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACCAGATCTTTGTGACCTaGTGGATCTCGGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDQIFVT*WISELR
Trigger: CCTCAACTCCGAGATCCACCAGGTCACAAAGATCTG...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACCCAATGCCTGGATCTTaGCCAGCAGCTTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHPMPGS*PAASGL
Trigger: AAGACCTGAAGCTGCTGGCCAAGATCCAGGCATTGG...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACGAGGTGACGAAAGGGTaGCATCCCTGGGTAAGTAAG +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHEVTKG*HPWVSK
Trigger: CTTACTTACCCAGGGATGCCACCCTTTCGTCACCTC...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTTCTCCAGATCTTTGTaGCCTGGTGGATCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHFSRSL*PGGSRS
Trigger: ACTCCGAGATCCACCAGGTCACAAAGATCTGGAGAA...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACAGGGGTTCATGTCATTaGAGGCGATGTTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDRGSCH*RRCSSA
Trigger: AGCTGATGAACATCGCCTTCAATGACATGAACCCCT...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CGCCGGGATGCCCGCCTCTCCAGGTACTCTGCCTTAAGCTGCTCCAGCTCCCGCGTAAGTAAGTGCCTATaGAGAAGTAGCCCAACCAAT +
Preference number: 4 (lower is better)
Translates to: RRDARLSRYSALSCSSSRVSKCL*RSSPTN
Trigger: ATTGGTTGGGCTACTTCTTCATAGGCACTTACTTAC...GCGGGAGCTGGAGCAGCTTAAGGCAGAGTACCTGGAGAGGCGGGCATCCCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGCTGCCAGCCGGAGACTaGGGAGGGACGAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVLPAGD*GGTRGP
Trigger: CGGACCCCTCGTCCCTCCGCAGTCTCCGGCTGGCAG...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGACTGCCAGCCGGAGACTaGGGAGGGACGAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRLPAGD*GGTRGP
Trigger: CGGACCCCTCGTCCCTCCGCAGTCTCCGGCTGGCAG...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGCTGCCAGCCGGAGACTaGGGAGGGACGAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEELPAGD*GGTRGP
Trigger: CGGACCCCTCGTCCCTCCGCAGTCTCCGGCTGGCAG...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAAAGCCGCCGCCAGGTATaGGCTGGACGCCCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDESRRQV*AGRPLL
Trigger: GAGAAGCGGGCGTCCAGCGCATACCTGGCGGCGGCT...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGAGCTCCTGCACCTGCTaGTCCCGCAGGCTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLSSCTC*SRRLAV
Trigger: CACAGCGAGCCTGCGGGAGCAGCAGGTGCAGGAGCT...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACATGTCATCCTTCAGGTaGTCTATCTTCCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHMSSFR*SIFPCW
Trigger: CCAGCAGGGGAAGATAGAGCACCTGAAGGATGACAT...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGCCTGCCCGCAGTAGCTaGTTGAGCTCGGCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLPARSS*LSSAEG
Trigger: GCCCTCAGCCGAGCTCAAGCAGCTACTGCGGGCAGG...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAACCTCGGACACAGCTCTaGGCCGGGATGCCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDEPRTQL*AGMPAS
Trigger: AGAGGCGGGCATCCCGGCGCAGAGCTGTGTCCGAGG...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGAGGGGTGGCAGGAGGTaGCGGCGGGCTGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLRGGRR*RRAVVE
Trigger: TTCCACAACAGCCCGCCGGCACCTCCTGCCACCCCT...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACAGTCAAACACTGCACTaGAGAGGTCGATGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHSQTLH*RGRCCP
Trigger: TGGACAGCATCGACCTCTCCAGTGCAGTGTTTGACT...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACATCTTTGTGACCTGGTaGATCTCGGAGTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDIFVTW*ISELRK
Trigger: CTTCCTCAACTCCGAGATCCACCAGGTCACAAAGAT...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACCAGATCTTTGTGACCTaGTGGATCTCGGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHQIFVT*WISELR
Trigger: CCTCAACTCCGAGATCCACCAGGTCACAAAGATCTG...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTACTTGCTTTCCACCTaGCAGTTTCTGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHYLLST*QFLAWR
Trigger: CCTCCAAGCCAGAAACTGCCAGGTGGAAAGCAAGTA...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGGCTCTGAGCACTCGCTaGCTTCGTCCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLALSTR*LRPPGP
Trigger: AGGCCCTGGGGGACGAAGCCAGCGAGTGCTCAGAGC...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGTCCAGCCGCTCCCGGTaGACCATGCGCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVSSRSR*TMRSCR
Trigger: GCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGGA...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGATCCAGCCGCTCCCGGTaGACCATGCGCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRSSRSR*TMRSCR
Trigger: GCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGGA...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGTCCAGCCGCTCCCGGTaGACCATGCGCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEESSRSR*TMRSCR
Trigger: GCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGGA...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACCAGTTCGGTTCCGTGTaGTTCCTTCAGAAAAGAATG +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDQFGSV*FLQKRM
Trigger: CATTCTTTTCTGAAGGAATCACACGGAACCGAACTG...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACAGGGGTTCATGTCATTaGAGGCGATGTTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHRGSCH*RRCSSA
Trigger: AGCTGATGAACATCGCCTTCAATGACATGAACCCCT...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGAGCGCCCTCCATCGCTaGCAGCCGGAGACTGCGGAG +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVSALHR*QPETAE
Trigger: CTCCGCAGTCTCCGGCTGGCAGCGATGGAGGGCGCT...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAAGCCGCCGCCAGGTATaGGCTGGACGCCCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRSRRQV*AGRPLL
Trigger: GAGAAGCGGGCGTCCAGCGCATACCTGGCGGCGGCT...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAACCCAGCTCCGCGATCTaGCGCACTTTGTGCCGCACC +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDEPSSAI*RTLCRT
Trigger: GGTGCGGCACAAAGTGCGGCAGATCGCGGAGCTGGG...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGTCCCCCAGGGCCTCCTaGAGCCTTCTCAGACCGGCC +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVSPRAS*SLLRPA
Trigger: GGCCGGTCTGAGAAGGCTGCAGGAGGCCCTGGGGGA...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAACCTGCCCGCAGTAGCTaGTTGAGCTCGGCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDEPARSS*LSSAEG
Trigger: GCCCTCAGCCGAGCTCAAGCAGCTACTGCGGGCAGG...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGCCGATGGTGGGGTTCTaGCAGGAGAAGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLPMVGF*QEKASS
Trigger: GCTGCTGGCCTTCTCCTGGCAGAACCCCACCATCGG...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGACCTCGGACACAGCTCTaGGCCGGGATGCCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRPRTQL*AGMPAS
Trigger: AGAGGCGGGCATCCCGGCGCAGAGCTGTGTCCGAGG...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp TGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCATTGCGCTTCATCTGCAGCTaGTGCAGCCAGTACAGCATC +
Preference number: 4 (lower is better)
Translates to: WTMRSCRSCFMRKGFMSLRFICS*CSQYSI
Trigger: GATGCTGTACTGGCTGCAGCAGCTGCAGATGAAGCG...CAATGACATGAACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGTGCCCTAGCTCGAGGTaGAGGACGGGCCCATTCCCA +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLCPSSR*RTGPFP
Trigger: TGGGAATGGGCCCGTCCTGCACCTCGAGCTAGGGCA...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGACAGGGGCAGAGGAGCTaGACTCCGGGGCGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRQGQRS*TPGRSP
Trigger: GGGAGAACGCCCCGGAGTCCAGCTCCTCTGCCCCTG...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGAGGTCCAGCTCAATCTaGCGGGCAGCAGGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLRSSSI*RAAGCS
Trigger: CGAGCACCCTGCTGCCCGCCAGATTGAGCTGGACCT...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAATCCGAGAGCAGGTCCTaGAGCACCCGCTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDESESRS*STRWST
Trigger: GGTGGACCAGCGGGTGCTCCAGGACCTGCTCTCGGA...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCATTGAAGGCGATGTTCGATGGGCCATCAGCCTaGGCAGCTTCTCCGAGAGCA +
Preference number: 4 (lower is better)
Translates to: SCRSCFMRKGFMSLKAMFDGPSA*AASPRA
Trigger: TGCTCTCGGAGAAGCTGCCCAGGCTGATGGCCCATC...GAACATCGCCTTCAATGACATGAACCCCTTCCGCATGAAACAGCTGCGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR TCA 90 bp CTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATACTTTAACTCCTTGGTaGGCATCAGAACCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LPVDHAQLPQLFHAEGVHTLTPW*ASEPVA
Trigger: AGCAACAGGTTCTGATGCTCACCAAGGAGTTAAAGT...ATGAACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR TCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGCTCGATGCTGTCAGATaGGGCCTCCCCAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLLDAVR*GLPSFP
Trigger: TGGGAAGCTGGGGAGGCCTCATCTGACAGCATCGAG...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAACCCGCAGTAGCTGCTTaGGCTCGGCTGAGGGCACAA +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDEPAVAA*ARLRAQ
Trigger: TTGTGCCCTCAGCCGAGCTCAAGCAGCTACTGCGGG...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp TGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCATTGCACTGGAGAGGTCGATaGTGTCCAAGGGATTGGCAT +
Preference number: 4 (lower is better)
Translates to: WTMRSCRSCFMRKGFMSLHWRGR*CPRDWH
Trigger: ATGCCAATCCCTTGGACAGCATCGACCTCTCCAGTG...CAATGACATGAACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGACGCCCGCTTCTCCTaGTGGGCGGCCTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHDARFS*WAASSA
Trigger: GGCACTGGAGGCCGCCCAGCAGGAGAAGCGGGCGTC...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGACGCCCGCTTCTCCTaGTGGGCGGCCTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKDARFS*WAASSA
Trigger: GGCACTGGAGGCCGCCCAGCAGGAGAAGCGGGCGTC...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGCCCAGCTCCGCGATCTaGCGCACTTTGTGCCGCACC +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEEPSSAI*RTLCRT
Trigger: GGTGCGGCACAAAGTGCGGCAGATCGCGGAGCTGGG...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACCGCAGGCTCGCTGTGTaGGCCAGGCTCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYRRLAV*ARLSRS
Trigger: GGAGCGGGAGAGCCTGGCGCACACAGCGAGCCTGCG...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGAGCTCCTGCACCTGCTaGTCCCGCAGGCTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVSSCTC*SRRLAV
Trigger: CACAGCGAGCCTGCGGGAGCAGCAGGTGCAGGAGCT...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAATGCTGCTGTAGCTCCTaGACCTGCTGCTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDECCCSS*TCCSRR
Trigger: CCTGCGGGAGCAGCAGGTGCAGGAGCTACAGCAGCA...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCTCCCCCAGGGCCTCCTaGAGCCTTCTCAGACCGGCC +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHASPRAS*SLLRPA
Trigger: GGCCGGTCTGAGAAGGCTGCAGGAGGCCCTGGGGGA...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGTGGGGCTCAGCTCGATaGTGTCAGATGAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLWGSAR*CQMRPP
Trigger: GGGAGGCCTCATCTGACAGCATCGAGCTGAGCCCCA...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGCCTGCCCGCAGTAGCTaGTTGAGCTCGGCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVPARSS*LSSAEG
Trigger: GCCCTCAGCCGAGCTCAAGCAGCTACTGCGGGCAGG...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGACCTGCCCGCAGTAGCTaGTTGAGCTCGGCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRPARSS*LSSAEG
Trigger: GCCCTCAGCCGAGCTCAAGCAGCTACTGCGGGCAGG...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp TGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCATTGGCCGCAGCTGTTTCATaGGGAAGGGGTTCATGTCAT +
Preference number: 4 (lower is better)
Translates to: WTMRSCRSCFMRKGFMSLAAAVS*GRGSCH
Trigger: ATGACATGAACCCCTTCCGCATGAAACAGCTGCGGC...CAATGACATGAACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGCTCCCGGTGGACCATaGGCAGCTGCCGCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVAPGGP*AAAAAV
Trigger: AACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGC...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAAGCTCTGCGCCGGGATaGCCGCCTCTCCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRSSAPG*PPLQVL
Trigger: GAGTACCTGGAGAGGCGGGCATCCCGGCGCAGAGCT...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACTCTTGCTTGTTTACATaGCAAAGTGCTCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDSCLFT*QSALWK
Trigger: CTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGA...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGAGGGGTGGCAGGAGGTaGCGGCGGGCTGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEERGGRR*RRAVVE
Trigger: TTCCACAACAGCCCGCCGGCACCTCCTGCCACCCCT...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGTGCTGTCCAAGGGATTaGCATCCTGAGCGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLCCPRD*HPERSA
Trigger: CGCGGACCGCTCAGGATGCCAATCCCTTGGACAGCA...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGACTCTGGCTCTCTCCCTaGGGTGCTGGCGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRLWLSP*GAGVRG
Trigger: GCCTCTGACGCCAGCACCCCAGGGAGAGAGCCAGAG...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGCTCTGGCTCTCTCCCTaGGGTGCTGGCGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEELWLSP*GAGVRG
Trigger: GCCTCTGACGCCAGCACCCCAGGGAGAGAGCCAGAG...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGAGGCCCAGCAGGTGGTaGGATCGTGACTCCAATGCC +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLRPSRW*DRDSNA
Trigger: GGCATTGGAGTCACGATCCCACCACCTGCTGGGCCT...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAAACCCGCTGGTCCACCTaGGATGCCGTCAGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDETRWST*DAVSVL
Trigger: CAACACGCTGACGGCATCCCAGGTGGACCAGCGGGT...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGATCCTGGAGCACCCGCTaGTCCACCTGGGATGCCGTC +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRSWSTR*STWDAV
Trigger: GACGGCATCCCAGGTGGACCAGCGGGTGCTCCAGGA...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGATCCGAGAGCAGGTCCTaGAGCACCCGCTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRSESRS*STRWST
Trigger: GGTGGACCAGCGGGTGCTCCAGGACCTGCTCTCGGA...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGGATGGGCCATCAGCCTaGGCAGCTTCTCCGAGAGCA +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLDGPSA*AASPRA
Trigger: TGCTCTCGGAGAAGCTGCCCAGGCTGATGGCCCATC...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAAAGGGAGAGATCCACGTaGTGCTGCCCCAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDERERST*CCPRWA
Trigger: GGCCCATCTGGGGCAGCACCACGTGGATCTCTCCCT...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACTCCAGCCGCTCCCGGTaGACCATGCGCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYSSRSR*TMRSCR
Trigger: GCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGGA...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGCCACCTCGTCCTCGCTaGCACAGCCCTCGGACACAG +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEEPPRPR*HSPRTQ
Trigger: CTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGTGG...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGCCACCTCGTCCTCGCTaGCACAGCCCTCGGACACAG +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVPPRPR*HSPRTQ
Trigger: CTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGTGG...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGCAGAGAGCTTGCAGATaGCCTGCTGCTTGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLQRACR*PAAWRG
Trigger: ACCACGCCAAGCAGCAGGTCATCTGCAAGCTCTCTG...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGCTGCCTCAGCAGCTCTaGGCACTCGCTGGCTTCGTC +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVLPQQL*ALAGFV
Trigger: GACGAAGCCAGCGAGTGCTCAGAGCTGCTGAGGCAG...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGCTGCCTCAGCAGCTCTaGGCACTCGCTGGCTTCGTC +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEELPQQL*ALAGFV
Trigger: GACGAAGCCAGCGAGTGCTCAGAGCTGCTGAGGCAG...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAACTCGATGCTGTCAGATaGGGCCTCCCCAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDELDAVR*GLPSFP
Trigger: TGGGAAGCTGGGGAGGCCTCATCTGACAGCATCGAG...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGCTGCTTGAGCTCGGCTaGGGGCACAAGATCGCCCAG +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVLLELG*GHKIAQ
Trigger: CTGGGCGATCTTGTGCCCTCAGCCGAGCTCAAGCAG...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGACTGCTTGAGCTCGGCTaGGGGCACAAGATCGCCCAG +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRLLELG*GHKIAQ
Trigger: CTGGGCGATCTTGTGCCCTCAGCCGAGCTCAAGCAG...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCGCTCTCTCCCTGGGGTaGTGGCGTCAGAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHAALSLG*WRQRPR
Trigger: CCTTGGCCTCTGACGCCAGCACCCCAGGGAGAGAGC...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCCCCAGCTCCGCGATCTaGCGCACTTTGTGCCGCACC +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHAPSSAI*RTLCRT
Trigger: GGTGCGGCACAAAGTGCGGCAGATCGCGGAGCTGGG...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGTGCTGCTGTAGCTCCTaGACCTGCTGCTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVCCCSS*TCCSRR
Trigger: CCTGCGGGAGCAGCAGGTGCAGGAGCTACAGCAGCA...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACTCCCCCAGGGCCTCCTaGAGCCTTCTCAGACCGGCC +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYSPRAS*SLLRPA
Trigger: GGCCGGTCTGAGAAGGCTGCAGGAGGCCCTGGGGGA...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGAGCTTCCCACTGCAGTaGCTCCTGGACAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLSFPLQ*LLDKLP
Trigger: AGGCAGCTTGTCCAGGAGGCACTGCAGTGGGAAGCT...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCGCTCCCGGTGGACCATaGGCAGCTGCCGCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHAAPGGP*AAAAAV
Trigger: AACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGC...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAGCTCTGCGCCGGGATaGCCGCCTCTCCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHASSAPG*PPLQVL
Trigger: GAGTACCTGGAGAGGCGGGCATCCCGGCGCAGAGCT...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGCAGTACAGCATCGCTTaGTTGGTGGCGGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLQYSIA*LVAAFR
Trigger: CCTGAAGGCCGCCACCAAGCAAGCGATGCTGTACTG...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACCAGGGGCAGAGGAGCTaGACTCCGGGGCGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYQGQRS*TPGRSP
Trigger: GGGAGAACGCCCCGGAGTCCAGCTCCTCTGCCCCTG...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGCGGAGGCGGCACCTGTaGATCCCTGGCAGACTCTTC +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEERRRHL*IPGRLF
Trigger: GAAGAGTCTGCCAGGGATCCACAGGTGCCGCCTCCG...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGACGGAGGCGGCACCTGTaGATCCCTGGCAGACTCTTC +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRRRRHL*IPGRLF
Trigger: GAAGAGTCTGCCAGGGATCCACAGGTGCCGCCTCCG...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCCTCTCCCTGGGGTGCTaGCGTCAGAGGCCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHALSLGC*RQRPRA
Trigger: AGCCCTTGGCCTCTGACGCCAGCACCCCAGGGAGAG...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp TGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCATTGCAGATCTTTGTGACCTaGTGGATCTCGGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: WTMRSCRSCFMRKGFMSLQIFVT*WISELR
Trigger: CCTCAACTCCGAGATCCACCAGGTCACAAAGATCTG...CAATGACATGAACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGTCGAGGCCCAGCAGGTaGTGGGATCGTGACTCCAAT +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLSRPSR*WDRDSN
Trigger: ATTGGAGTCACGATCCCACCACCTGCTGGGCCTCGA...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGAGGTCCAGCTCAATCTaGCGGGCAGCAGGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVRSSSI*RAAGCS
Trigger: CGAGCACCCTGCTGCCCGCCAGATTGAGCTGGACCT...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGAGGTCCAGCTCAATCTaGCGGGCAGCAGGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEERSSSI*RAAGCS
Trigger: CGAGCACCCTGCTGCCCGCCAGATTGAGCTGGACCT...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCGGACCAGCAGGGCAATaGCCGCCAGCCTGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHAGPAGQ*PPACSG
Trigger: GCCTGAACAGGCTGGCGGCCATTGCCCTGCTGGTCC...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCTCCTGGAGCACCCGCTaGTCCACCTGGGATGCCGTC +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHASWSTR*STWDAV
Trigger: GACGGCATCCCAGGTGGACCAGCGGGTGCTCCAGGA...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAAGATGGGCCATCAGCCTaGGCAGCTTCTCCGAGAGCA +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDEDGPSA*AASPRA
Trigger: TGCTCTCGGAGAAGCTGCCCAGGCTGATGGCCCATC...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAAGGGAGAGATCCACGTaGTGCTGCCCCAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRRERST*CCPRWA
Trigger: GGCCCATCTGGGGCAGCACCACGTGGATCTCTCCCT...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGTGCCTGACCTCCAGTaGGTCTGCCAGCCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVVPDLQ*VCQPRV
Trigger: CACCCTTGGCTGGCAGACCCACTGGAGGTCAGGCAC...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCATTGAAGGCGATGTTCCAGTCCCCAGGTGCTTaGGGGAAATATTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: SCRSCFMRKGFMSLKAMFQSPGA*GKYSEG
Trigger: CCCTTCAGAATATTTCCCTCAAGCACCTGGGGACTG...GAACATCGCCTTCAATGACATGAACCCCTTCCGCATGAAACAGCTGCGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR TCA 90 bp AGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCATTGAAGGCGATGTTCTGGCGCTTGGCTTTCTaGGCGAAACTGATGGTCAGA +
Preference number: 4 (lower is better)
Translates to: SCRSCFMRKGFMSLKAMFWRLAF*AKLMVR
Trigger: TCTGACCATCAGTTTCGCTCAGAAAGCCAAGCGCCA...GAACATCGCCTTCAATGACATGAACCCCTTCCGCATGAAACAGCTGCGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR TCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAAGGTGGATCTCGGAGTTaGGGAAGCAGTTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDEGGSRS*GSSSGS
Trigger: GGACCCAGAACTGCTTCCTCAACTCCGAGATCCACC...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGCCTCAGGCAGGCCACTaGACCACTCTGACCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVPQAGH*TTLTLC
Trigger: ACAGAGGGTCAGAGTGGTTCAGTGGCCTGCCTGAGG...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375063.5
CDS-3UTR GCA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTTGCCACGGATGTTGTaGATTGTGTTCTGTATTTCA +
Preference number: 4 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHLPRML*IVFCIS
Trigger: TGAAATACAGAACACAATGCACAACATCCGTGGCAA...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAACCTGTTCCCTGGGCCTaGTTGTTGCCACGGATGTTG +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDEPVPWA*LLPRML
Trigger: CAACATCCGTGGCAACAAGCAGGCCCAGGGAACAGG...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGCTCTCTCCCTGGGGTaGTGGCGTCAGAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKALSLG*WRQRPR
Trigger: CCTTGGCCTCTGACGCCAGCACCCCAGGGAGAGAGC...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACGCTCTCTCCCTGGGGTaGTGGCGTCAGAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYALSLG*WRQRPR
Trigger: CCTTGGCCTCTGACGCCAGCACCCCAGGGAGAGAGC...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGCTGGGCGGCCTCCAGTaGCTTGTGCAGGATCTTCAC +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVLGGLQ*LVQDLH
Trigger: GTGAAGATCCTGCACAAGGCACTGGAGGCCGCCCAG...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAACCCAGCTCCGCGATCTaGCGCACTTTGTGCCGCACC +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKPSSAI*RTLCRT
Trigger: GGTGCGGCACAAAGTGCGGCAGATCGCGGAGCTGGG...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATAGCTCCTGCACCTGCTaGTCCCGCAGGCTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHSSCTC*SRRLAV
Trigger: CACAGCGAGCCTGCGGGAGCAGCAGGTGCAGGAGCT...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCTGTAGCTCCTGCACCTaGTGCTCCCGCAGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHACSSCT*CSRRLA
Trigger: AGCGAGCCTGCGGGAGCAGCAGGTGCAGGAGCTACA...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGAGCAGCTGCACGTGCTaGTGTAGCTCCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEESSCTC*CSSCTC
Trigger: GCAGGTGCAGGAGCTACAGCAGCACGTGCAGCTGCT...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGGACCGGCCAGGTACTTaGTTTCCACCTGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLDRPGT*FPPGSF
Trigger: GAAACTGCCAGGTGGAAAGCAAGTACCTGGCCGGTC...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAAAGCTTCCCACTGCAGTaGCTCCTGGACAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDESFPLQ*LLDKLP
Trigger: AGGCAGCTTGTCCAGGAGGCACTGCAGTGGGAAGCT...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGTGGGGCTCAGCTCGATaGTGTCAGATGAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVWGSAR*CQMRPP
Trigger: GGGAGGCCTCATCTGACAGCATCGAGCTGAGCCCCA...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGATGGGGCTCAGCTCGATaGTGTCAGATGAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRWGSAR*CQMRPP
Trigger: GGGAGGCCTCATCTGACAGCATCGAGCTGAGCCCCA...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAACTGGTCCACCTGGGATaGCGTCAGCGTGTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDELVHLG*RQRVAV
Trigger: TACTGCAACACGCTGACGGCATCCCAGGTGGACCAG...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGTGGACCATGCGCAGCTaGCGCAGCTGTTTCATGCGG +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVWTMRS*RSCFMR
Trigger: CCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCA...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGTGGACCATGCGCAGCTaGCGCAGCTGTTTCATGCGG +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEEWTMRS*RSCFMR
Trigger: CCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCA...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGCTCCCGGTGGACCATaGGCAGCTGCCGCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKAPGGP*AAAAAV
Trigger: AACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGC...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGACCTCCAGTGGGTCTaGCAGCCAAGGGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEEDLQWV*QPRVRK
Trigger: CTTCCTCACCCTTGGCTGGCAGACCCACTGGAGGTC...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGACCTCCAGTGGGTCTaGCAGCCAAGGGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRDLQWV*QPRVRK
Trigger: CTTCCTCACCCTTGGCTGGCAGACCCACTGGAGGTC...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGCACCTGTGGATCCCTaGCAGACTCTTCGGACCCAG +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVAPVDP*QTLRTQ
Trigger: CTGGGTCCGAAGAGTCTGCCAGGGATCCACAGGTGC...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGCACCTGTGGATCCCTaGCAGACTCTTCGGACCCAG +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEEAPVDP*QTLRTQ
Trigger: CTGGGTCCGAAGAGTCTGCCAGGGATCCACAGGTGC...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAACCCACAGAGTTTCTTaGGGACCGCCTCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRTHRVS*GPPPGT
Trigger: GGTCCCTGGAGGCGGTCCCCAAGAAACTCTGTGGGT...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGATTTCCAGCCCCGGATaGGCCCTTTGCCGCCGAACT +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVISSPG*ALCRRT
Trigger: AGTTCGGCGGCAAAGGGCCCATCCGGGGCTGGAAAT...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGTGCTGTCCAAGGGATTaGCATCCTGAGCGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEECCPRD*HPERSA
Trigger: CGCGGACCGCTCAGGATGCCAATCCCTTGGACAGCA...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGTCATGGCCTGTTCCCTaGGCCTGCTTGTTGCCACGG +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEESWPVP*ACLLPR
Trigger: CCGTGGCAACAAGCAGGCCCAGGGAACAGGCCATGA...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAACTCTCCCTGGGGTGCTaGCGTCAGAGGCCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKLSLGC*RQRPRA
Trigger: AGCCCTTGGCCTCTGACGCCAGCACCCCAGGGAGAG...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACCTCTCCCTGGGGTGCTaGCGTCAGAGGCCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYLSLGC*RQRPRA
Trigger: AGCCCTTGGCCTCTGACGCCAGCACCCCAGGGAGAG...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACCTCTGGCTCTCTCCCTaGGGTGCTGGCGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYLWLSP*GAGVRG
Trigger: GCCTCTGACGCCAGCACCCCAGGGAGAGAGCCAGAG...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAACCGCCAGGTATGCGCTaGACGCCCGCTTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKPPGMR*TPASPA
Trigger: AGCAGGAGAAGCGGGCGTCCAGCGCATACCTGGCGG...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACCCGCCAGGTATGCGCTaGACGCCCGCTTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYPPGMR*TPASPA
Trigger: AGCAGGAGAAGCGGGCGTCCAGCGCATACCTGGCGG...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGTCAGGAAGTCCCTGTTaGCAGCGTCGGGGCGCAAAG +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVSGSPC*QRRGAK
Trigger: CTTTGCGCCCCGACGCTGCCAACAGGGACTTCCTGA...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAACCACCTGGCAGTTTCTaGCTTGGAGGTAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDEPPGSF*LGGRRT
Trigger: AGTGCGCCTACCTCCAAGCCAGAAACTGCCAGGTGG...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCTCTGAGCACTCGCTaGCTTCGTCCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHALSTR*LRPPGP
Trigger: AGGCCCTGGGGGACGAAGCCAGCGAGTGCTCAGAGC...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGCACTGCAGTGCCTCCTaGACAAGCTGCCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVHCSAS*TSCLSS
Trigger: GCTGCTGAGGCAGCTTGTCCAGGAGGCACTGCAGTG...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGAGGCCCAGCAGGTGGTaGGATCGTGACTCCAATGCC +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEERPSRW*DRDSNA
Trigger: GGCATTGGAGTCACGATCCCACCACCTGCTGGGCCT...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCGGAGTGTGCAGGTGCTaGACACGGAGGTGGACCAGC +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHAGVCRC*TRRWTS
Trigger: GCTGGTCCACCTCCGTGTCCAGCACCTGCACACTCC...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCACCCGCTGGTCCACCTaGGATGCCGTCAGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHATRWST*DAVSVL
Trigger: CAACACGCTGACGGCATCCCAGGTGGACCAGCGGGT...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATTCCTGGAGCACCCGCTaGTCCACCTGGGATGCCGTC +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHSWSTR*STWDAV
Trigger: GACGGCATCCCAGGTGGACCAGCGGGTGCTCCAGGA...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAATCCTGGAGCACCCGCTaGTCCACCTGGGATGCCGTC +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKSWSTR*STWDAV
Trigger: GACGGCATCCCAGGTGGACCAGCGGGTGCTCCAGGA...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACTCCGAGAGCAGGTCCTaGAGCACCCGCTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYSESRS*STRWST
Trigger: GGTGGACCAGCGGGTGCTCCAGGACCTGCTCTCGGA...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGATGGGCCATCAGCCTaGGCAGCTTCTCCGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEEDGPSA*AASPRA
Trigger: TGCTCTCGGAGAAGCTGCCCAGGCTGATGGCCCATC...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATCCACCTCGTCCTCGCTaGCACAGCCCTCGGACACAG +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHPPRPR*HSPRTQ
Trigger: CTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGTGG...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGCCGGCGGGCTGTTGTaGAATTCCCAGCGCTTCATC +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRAGGLL*NSQRFI
Trigger: GATGAAGCGCTGGGAATTCCACAACAGCCCGCCGGC...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGACCCGGCTGGGAGTCTTaGTTTCGAAGATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRPGWES*FRRSPP
Trigger: AGGAGGGGATCTTCGAAATCAAGACTCCCAGCCGGG...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGCAGTCCCCAGGTGCTTaGGGGAAATATTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLQSPGA*GKYSEG
Trigger: CCCTTCAGAATATTTCCCTCAAGCACCTGGGGACTG...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGTGGCGCTTGGCTTTCTaGGCGAAACTGATGGTCAGA +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLWRLAF*AKLMVR
Trigger: TCTGACCATCAGTTTCGCTCAGAAAGCCAAGCGCCA...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACCTGCCTCAGCAGCTCTaGGCACTCGCTGGCTTCGTC +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYLPQQL*ALAGFV
Trigger: GACGAAGCCAGCGAGTGCTCAGAGCTGCTGAGGCAG...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCCTCGATGCTGTCAGATaGGGCCTCCCCAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHALDAVR*GLPSFP
Trigger: TGGGAAGCTGGGGAGGCCTCATCTGACAGCATCGAG...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAACTGCTTGAGCTCGGCTaGGGGCACAAGATCGCCCAG +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKLLELG*GHKIAQ
Trigger: CTGGGCGATCTTGTGCCCTCAGCCGAGCTCAAGCAG...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACCCCGCAGTAGCTGCTTaGGCTCGGCTGAGGGCACAA +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYPAVAA*ARLRAQ
Trigger: TTGTGCCCTCAGCCGAGCTCAAGCAGCTACTGCGGG...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGAGTAATCAGCGGGCATaGTGGTCTCCACAATGGCCA +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLSNQRA*WSPQWP
Trigger: TGGCCATTGTGGAGACCATCATGCCCGCTGATTACT...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGCTCTGTGGAAGAGGTaGCGAAAGGGTGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRALWKR*RKGGIP
Trigger: AGGGATGCCACCCTTTCGTCACCTCTTCCACAGAGC...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGCTCTGTGGAAGAGGTaGCGAAAGGGTGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVALWKR*RKGGIP
Trigger: AGGGATGCCACCCTTTCGTCACCTCTTCCACAGAGC...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGCACTGGAGAGGTCGATaGTGTCCAAGGGATTGGCAT +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLHWRGR*CPRDWH
Trigger: ATGCCAATCCCTTGGACAGCATCGACCTCTCCAGTG...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAACCTGGGCCTGCTTGTTaGCACGGATGTTGTGCATTG +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDEPGPAC*HGCCAL
Trigger: CAATGCACAACATCCGTGGCAACAAGCAGGCCCAGG...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGCAGAGAAGGCTTGGGTaGAGGCTTTGGAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLQRRLG*RLWRIL
Trigger: GAGGATTCTCCAAAGCCTGCACCCAAGCCTTCTCTG...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAATCTGCCGCACTTTGTaGCGCACCAGCTCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKICRTL*RTSSSR
Trigger: CCGGCTGGAGCTGGTGCGGCACAAAGTGCGGCAGAT...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATCTGCCGCACTTTGTaGCGCACCAGCTCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYICRTL*RTSSSR
Trigger: CCGGCTGGAGCTGGTGCGGCACAAAGTGCGGCAGAT...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAATGCTGCTGTAGCTCCTaGACCTGCTGCTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKCCCSS*TCCSRR
Trigger: CCTGCGGGAGCAGCAGGTGCAGGAGCTACAGCAGCA...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAAGACCGGCCAGGTACTTaGTTTCCACCTGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDEDRPGT*FPPGSF
Trigger: GAAACTGCCAGGTGGAAAGCAAGTACCTGGCCGGTC...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAACCGATGGTGGGGTTCTaGCAGGAGAAGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKPMVGF*QEKASS
Trigger: GCTGCTGGCCTTCTCCTGGCAGAACCCCACCATCGG...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATCCGATGGTGGGGTTCTaGCAGGAGAAGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHPMVGF*QEKASS
Trigger: GCTGCTGGCCTTCTCCTGGCAGAACCCCACCATCGG...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGATGCCGTCAGCGTGTTaGAGTAGTAATCAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLMPSAC*SSNQRA
Trigger: TGCCCGCTGATTACTACTGCAACACGCTGACGGCAT...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAATACTCTGCCTTAAGCTaGTCCAGCTCCCGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDEYSALS*SSSRSS
Trigger: TGAGCTGCGGGAGCTGGAGCAGCTTAAGGCAGAGTA...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAACGCTTCATCTGCAGCTaGTGCAGCCAGTACAGCATC +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDERFICS*CSQYSI
Trigger: GATGCTGTACTGGCTGCAGCAGCTGCAGATGAAGCG...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGATCCCAGCGCTTCATCTaGAGCTGCTGCAGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRSQRFI*SCCSQY
Trigger: GTACTGGCTGCAGCAGCTGCAGATGAAGCGCTGGGA...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATTGCCCTAGCTCGAGGTaGAGGACGGGCCCATTCCCA +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHCPSSR*RTGPFP
Trigger: TGGGAATGGGCCCGTCCTGCACCTCGAGCTAGGGCA...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGAGCTCTGCCTCTTCTTaGCCTAGCTCGAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEESSASS*PSSRCR
Trigger: CCTGCACCTCGAGCTAGGGCAAGAAGAGGCAGAGCT...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATCGGAGGCGGCACCTGTaGATCCCTGGCAGACTCTTC +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHRRRHL*IPGRLF
Trigger: GAAGAGTCTGCCAGGGATCCACAGGTGCCGCCTCCG...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCTCATGGCCTGTTCCCTaGGCCTGCTTGTTGCCACGG +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHASWPVP*ACLLPR
Trigger: CCGTGGCAACAAGCAGGCCCAGGGAACAGGCCATGA...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGCTTGGGTGCAGGCTTTaGAGAATCCTCTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLLGCRL*RILWLS
Trigger: AGAGAGCCAGAGGATTCTCCAAAGCCTGCACCCAAG...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGCTGCCACTTTCTCCTaGGCAGTTCGGTTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEEAATFS*AVRFRV
Trigger: CACACGGAACCGAACTGCCCAGGAGAAAGTGGCAGC...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGCTGCCACTTTCTCCTaGGCAGTTCGGTTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVAATFS*AVRFRV
Trigger: CACACGGAACCGAACTGCCCAGGAGAAAGTGGCAGC...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCTCAGGAAGTCCCTGTTaGCAGCGTCGGGGCGCAAAG +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHASGSPC*QRRGAK
Trigger: CTTTGCGCCCCGACGCTGCCAACAGGGACTTCCTGA...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGACCACCTGGCAGTTTCTaGCTTGGAGGTAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRPPGSF*LGGRRT
Trigger: AGTGCGCCTACCTCCAAGCCAGAAACTGCCAGGTGG...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGCCACCTGGCAGTTTCTaGCTTGGAGGTAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVPPGSF*LGGRRT
Trigger: AGTGCGCCTACCTCCAAGCCAGAAACTGCCAGGTGG...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCCACTGCAGTGCCTCCTaGACAAGCTGCCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHAHCSAS*TSCLSS
Trigger: GCTGCTGAGGCAGCTTGTCCAGGAGGCACTGCAGTG...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGATCGAGGCCCAGCAGGTaGTGGGATCGTGACTCCAAT +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRSRPSR*WDRDSN
Trigger: ATTGGAGTCACGATCCCACCACCTGCTGGGCCTCGA...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGTCGAGGCCCAGCAGGTaGTGGGATCGTGACTCCAAT +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVSRPSR*WDRDSN
Trigger: ATTGGAGTCACGATCCCACCACCTGCTGGGCCTCGA...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGGAGTGTGCAGGTGCTaGACACGGAGGTGGACCAGC +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKGVCRC*TRRWTS
Trigger: GCTGGTCCACCTCCGTGTCCAGCACCTGCACACTCC...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGGAGTGTGCAGGTGCTaGACACGGAGGTGGACCAGC +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHGVCRC*TRRWTS
Trigger: GCTGGTCCACCTCCGTGTCCAGCACCTGCACACTCC...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAAGGTCCAGCTCAATCTaGCGGGCAGCAGGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKRSSSI*RAAGCS
Trigger: CGAGCACCCTGCTGCCCGCCAGATTGAGCTGGACCT...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAACCCGCTGGTCCACCTaGGATGCCGTCAGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKTRWST*DAVSVL
Trigger: CAACACGCTGACGGCATCCCAGGTGGACCAGCGGGT...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATAGGGAGAGATCCACGTaGTGCTGCCCCAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHRERST*CCPRWA
Trigger: GGCCCATCTGGGGCAGCACCACGTGGATCTCTCCCT...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACGTGCCTGACCTCCAGTaGGTCTGCCAGCCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYVPDLQ*VCQPRV
Trigger: CACCCTTGGCTGGCAGACCCACTGGAGGTCAGGCAC...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCGCCGGCGGGCTGTTGTaGAATTCCCAGCGCTTCATC +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHAAGGLL*NSQRFI
Trigger: GATGAAGCGCTGGGAATTCCACAACAGCCCGCCGGC...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCCAGAGAGCTTGCAGATaGCCTGCTGCTTGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHAQRACR*PAAWRG
Trigger: ACCACGCCAAGCAGCAGGTCATCTGCAAGCTCTCTG...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGACAGGTGGTGGGATCGTaGCTCCAATGCCTGGATCTT +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRQVVGS*LQCLDL
Trigger: AAGATCCAGGCATTGGAGTCACGATCCCACCACCTG...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAAAGTAATCAGCGGGCATaGTGGTCTCCACAATGGCCA +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDESNQRA*WSPQWP
Trigger: TGGCCATTGTGGAGACCATCATGCCCGCTGATTACT...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATTCCAAGGTCACATGGTaGTGGGACACCCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHSKVTW*WDTQGW
Trigger: CCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGA...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCCCTGTTCCCTGGGCCTaGTTGTTGCCACGGATGTTG +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHAPVPWA*LLPRML
Trigger: CAACATCCGTGGCAACAAGCAGGCCCAGGGAACAGG...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAACAGAGAAGGCTTGGGTaGAGGCTTTGGAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDEQRRLG*RLWRIL
Trigger: GAGGATTCTCCAAAGCCTGCACCCAAGCCTTCTCTG...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGACTGTTGCTCCAAGGCTaGCACTTTCTCCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRLLLQG*HFLLGS
Trigger: ACTGCCCAGGAGAAAGTGGCAGCCTTGGAGCAACAG...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGAGCATCAGAACCTGTTaGTCCAAGGCTGCCACTTTC +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLSIRTC*SKAATF
Trigger: GAAAGTGGCAGCCTTGGAGCAACAGGTTCTGATGCT...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAACTGGGCGGCCTCCAGTaGCTTGTGCAGGATCTTCAC +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKLGGLQ*LVQDLH
Trigger: GTGAAGATCCTGCACAAGGCACTGGAGGCCGCCCAG...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACCTGGGCGGCCTCCAGTaGCTTGTGCAGGATCTTCAC +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYLGGLQ*LVQDLH
Trigger: GTGAAGATCCTGCACAAGGCACTGGAGGCCGCCCAG...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACAGCAGCTGCACGTGCTaGTGTAGCTCCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYSSCTC*CSSCTC
Trigger: GCAGGTGCAGGAGCTACAGCAGCACGTGCAGCTGCT...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGTGCTCTATCTTCCCCTaGTGGCTCAGGAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEECSIFP*WLRKSL
Trigger: CAGGGACTTCCTGAGCCAGCAGGGGAAGATAGAGCA...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGATGCTCTATCTTCCCCTaGTGGCTCAGGAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRCSIFP*WLRKSL
Trigger: CAGGGACTTCCTGAGCCAGCAGGGGAAGATAGAGCA...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAGCTTCCCACTGCAGTaGCTCCTGGACAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHASFPLQ*LLDKLP
Trigger: AGGCAGCTTGTCCAGGAGGCACTGCAGTGGGAAGCT...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGATACTCTGCCTTAAGCTaGTCCAGCTCCCGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRYSALS*SSSRSS
Trigger: TGAGCTGCGGGAGCTGGAGCAGCTTAAGGCAGAGTA...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGCCTCTCCAGGTACTCTaGCTTAAGCTGCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVPLQVL*LKLLQL
Trigger: GAGCTGGAGCAGCTTAAGGCAGAGTACCTGGAGAGG...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCATTTCTTGCTTGTTTACATaGCAAAGTGCTCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: VDHAQLPQLFHAEGVHVISCLFT*QSALWK
Trigger: CTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGA...AATGACATGAACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR GCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGCGCTTCATCTGCAGCTaGTGCAGCCAGTACAGCATC +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEERFICS*CSQYSI
Trigger: GATGCTGTACTGGCTGCAGCAGCTGCAGATGAAGCG...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATACCCACAGAGTTTCTTaGGGACCGCCTCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHTHRVS*GPPPGT
Trigger: GGTCCCTGGAGGCGGTCCCCAAGAAACTCTGTGGGT...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATTTCCAGCCCCGGATaGGCCCTTTGCCGCCGAACT +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYISSPG*ALCRRT
Trigger: AGTTCGGCGGCAAAGGGCCCATCCGGGGCTGGAAAT...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATTGCTGTCCAAGGGATTaGCATCCTGAGCGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHCCPRD*HPERSA
Trigger: CGCGGACCGCTCAGGATGCCAATCCCTTGGACAGCA...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGAGTCAAACACTGCACTaGAGAGGTCGATGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLSQTLH*RGRCCP
Trigger: TGGACAGCATCGACCTCTCCAGTGCAGTGTTTGACT...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATTCAGGAAGTCCCTGTTaGCAGCGTCGGGGCGCAAAG +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHSGSPC*QRRGAK
Trigger: CTTTGCGCCCCGACGCTGCCAACAGGGACTTCCTGA...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGTACTTGCTTTCCACCTaGCAGTTTCTGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLYLLST*QFLAWR
Trigger: CCTCCAAGCCAGAAACTGCCAGGTGGAAAGCAAGTA...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAACCAATGCCTGGATCTTaGCCAGCAGCTTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDEPMPGS*PAASGL
Trigger: AAGACCTGAAGCTGCTGGCCAAGATCCAGGCATTGG...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATAGGCCCAGCAGGTGGTaGGATCGTGACTCCAATGCC +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHRPSRW*DRDSNA
Trigger: GGCATTGGAGTCACGATCCCACCACCTGCTGGGCCT...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACAGGCCCAGCAGGTGGTaGGATCGTGACTCCAATGCC +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYRPSRW*DRDSNA
Trigger: GGCATTGGAGTCACGATCCCACCACCTGCTGGGCCT...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGATGGGCCATCAGCCTaGGCAGCTTCTCCGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHDGPSA*AASPRA
Trigger: TGCTCTCGGAGAAGCTGCCCAGGCTGATGGCCCATC...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCTCCTGGCTGATGTTCTaGCTGGAAGGCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHASWLMF*LEGLRQ
Trigger: CTGCCTGAGGCCTTCCAGCCAGAACATCAGCCAGGA...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375063.5
CDS-3UTR TCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATCCCGGCTGGGAGTCTTaGTTTCGAAGATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHPGWES*FRRSPP
Trigger: AGGAGGGGATCTTCGAAATCAAGACTCCCAGCCGGG...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGTTGAGGGAAATATTCTaGAGGGCAGGGAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVLREIF*RAGKGC
Trigger: GCAGCCCTTCCCTGCCCTTCAGAATATTTCCCTCAA...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACCAGAGAGCTTGCAGATaGCCTGCTGCTTGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYQRACR*PAAWRG
Trigger: ACCACGCCAAGCAGCAGGTCATCTGCAAGCTCTCTG...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGGTGGATCTCGGAGTTaGGGAAGCAGTTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKGGSRS*GSSSGS
Trigger: GGACCCAGAACTGCTTCCTCAACTCCGAGATCCACC...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAAACTCATCATACTTACTaGTGGGGCTCAGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDETHHTY*WGSARC
Trigger: GCATCGAGCTGAGCCCCATCAGTAAGTATGATGAGT...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCCAGGTGGTGGGATCGTaGCTCCAATGCCTGGATCTT +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHAQVVGS*LQCLDL
Trigger: AAGATCCAGGCATTGGAGTCACGATCCCACCACCTG...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGTGGAGATGGTCTTGGTaGAGAAGCGCAGGTACTGGT +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEEWRWSW*RSAGTG
Trigger: ACCAGTACCTGCGCTTCTTCACCAAGACCATCTCCA...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGATGGAGATGGTCTTGGTaGAGAAGCGCAGGTACTGGT +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRWRWSW*RSAGTG
Trigger: ACCAGTACCTGCGCTTCTTCACCAAGACCATCTCCA...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGACCCGGATGGGCCCTTTaGCGCCGAACTTACTTAAAT +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRPGWAL*RRTYLN
Trigger: ATTTAAGTAAGTTCGGCGGCAAAGGGCCCATCCGGG...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGCCCGGATGGGCCCTTTaGCGCCGAACTTACTTAAAT +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVPGWAL*RRTYLN
Trigger: ATTTAAGTAAGTTCGGCGGCAAAGGGCCCATCCGGG...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACCCTGTTCCCTGGGCCTaGTTGTTGCCACGGATGTTG +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYPVPWA*LLPRML
Trigger: CAACATCCGTGGCAACAAGCAGGCCCAGGGAACAGG...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGCAGAGAAGGCTTGGGTaGAGGCTTTGGAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVQRRLG*RLWRIL
Trigger: GAGGATTCTCCAAAGCCTGCACCCAAGCCTTCTCTG...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAAAGCATCAGAACCTGTTaGTCCAAGGCTGCCACTTTC +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDESIRTC*SKAATF
Trigger: GAAAGTGGCAGCCTTGGAGCAACAGGTTCTGATGCT...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGTTGTCCATAAGCAGCTaGACGTGCTGCTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVLSISS*TCCCSS
Trigger: GGAGCTACAGCAGCACGTGCAGCTGCTTATGGACAA...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGTTGTCCATAAGCAGCTaGACGTGCTGCTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEELSISS*TCCCSS
Trigger: GGAGCTACAGCAGCACGTGCAGCTGCTTATGGACAA...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGTTGCAGATGACCTGCTaGTTGGCGTGGTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVLQMTC*LAWFLS
Trigger: GGACAAGAACCACGCCAAGCAGCAGGTCATCTGCAA...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATCTGGTCCACCTGGGATaGCGTCAGCGTGTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHLVHLG*RQRVAV
Trigger: TACTGCAACACGCTGACGGCATCCCAGGTGGACCAG...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGCCGCAGCTGTTTCATaGGGAAGGGGTTCATGTCAT +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRAAAVS*GRGSCH
Trigger: ATGACATGAACCCCTTCCGCATGAAACAGCTGCGGC...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGCCGCAGCTGTTTCATaGGGAAGGGGTTCATGTCAT +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVAAAVS*GRGSCH
Trigger: ATGACATGAACCCCTTCCGCATGAAACAGCTGCGGC...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCTACTCTGCCTTAAGCTaGTCCAGCTCCCGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHAYSALS*SSSRSS
Trigger: TGAGCTGCGGGAGCTGGAGCAGCTTAAGGCAGAGTA...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACCAGTACAGCATCGCTTaGTTGGTGGCGGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYQYSIA*LVAAFR
Trigger: CCTGAAGGCCGCCACCAAGCAAGCGATGCTGTACTG...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGATTCATCTGCAGCTGCTaGAGCCAGTACAGCATCGCT +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRFICSC*SQYSIA
Trigger: AGCGATGCTGTACTGGCTGCAGCAGCTGCAGATGAA...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATTCCCAGCGCTTCATCTaGAGCTGCTGCAGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHSQRFI*SCCSQY
Trigger: GTACTGGCTGCAGCAGCTGCAGATGAAGCGCTGGGA...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGTGGAGAATCTTCCCCTaGAGGTTCATGGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEEWRIFP*RFMACS
Trigger: GGAACAGGCCATGAACCTCCAGGGGAAGATTCTCCA...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGATGGAGAATCTTCCCCTaGAGGTTCATGGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRWRIFP*RFMACS
Trigger: GGAACAGGCCATGAACCTCCAGGGGAAGATTCTCCA...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGCTTGGGTGCAGGCTTTaGAGAATCCTCTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEELGCRL*RILWLS
Trigger: AGAGAGCCAGAGGATTCTCCAAAGCCTGCACCCAAG...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGACCTGCTGCTTGGCGTaGTTCTTGTCCATAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVTCCLA*FLSISS
Trigger: GCTGCTTATGGACAAGAACCACGCCAAGCAGCAGGT...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGTCTATCTTCCCCTGCTaGCTCAGGAAGTCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVSIFPC*LRKSLL
Trigger: CAACAGGGACTTCCTGAGCCAGCAGGGGAAGATAGA...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATCCACCTGGCAGTTTCTaGCTTGGAGGTAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHPPGSF*LGGRRT
Trigger: AGTGCGCCTACCTCCAAGCCAGAAACTGCCAGGTGG...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGCCAATGCCTGGATCTTaGCCAGCAGCTTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVPMPGS*PAASGL
Trigger: AAGACCTGAAGCTGCTGGCCAAGATCCAGGCATTGG...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGACCAATGCCTGGATCTTaGCCAGCAGCTTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRPMPGS*PAASGL
Trigger: AAGACCTGAAGCTGCTGGCCAAGATCCAGGCATTGG...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCCGTGACTCCAATGCCTaGATCTTGGCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHARDSNA*ILASSF
Trigger: GAAGCTGCTGGCCAAGATCCAGGCATTGGAGTCACG...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAATCGAGGCCCAGCAGGTaGTGGGATCGTGACTCCAAT +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKSRPSR*WDRDSN
Trigger: ATTGGAGTCACGATCCCACCACCTGCTGGGCCTCGA...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGAGGTGACGAAAGGGTaGCATCCCTGGGTAAGTAAG +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEEEVTKG*HPWVSK
Trigger: CTTACTTACCCAGGGATGCCACCCTTTCGTCACCTC...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAGGTGACGAAAGGGTaGCATCCCTGGGTAAGTAAG +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVEVTKG*HPWVSK
Trigger: CTTACTTACCCAGGGATGCCACCCTTTCGTCACCTC...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCCAGTCCCCAGGTGCTTaGGGGAAATATTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHAQSPGA*GKYSEG
Trigger: CCCTTCAGAATATTTCCCTCAAGCACCTGGGGACTG...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGCTTTCTGAGCGAAACTaGTGGTCAGAGAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEELSERN*WSEKAW
Trigger: CCAAGCCTTCTCTGACCATCAGTTTCGCTCAGAAAG...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGACTTTCTGAGCGAAACTaGTGGTCAGAGAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRLSERN*WSEKAW
Trigger: CCAAGCCTTCTCTGACCATCAGTTTCGCTCAGAAAG...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGTTCACTAGCTCCTTCTaGGACTTTAACTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLFTSSF*DFNSLV
Trigger: CACCAAGGAGTTAAAGTCTCAGAAGGAGCTAGTGAA...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGTTCTCCAGATCTTTGTaGCCTGGTGGATCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVFSRSL*PGGSRS
Trigger: ACTCCGAGATCCACCAGGTCACAAAGATCTGGAGAA...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACCAGGTGGTGGGATCGTaGCTCCAATGCCTGGATCTT +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYQVVGS*LQCLDL
Trigger: AAGATCCAGGCATTGGAGTCACGATCCCACCACCTG...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAGTAATCAGCGGGCATaGTGGTCTCCACAATGGCCA +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHASNQRA*WSPQWP
Trigger: TGGCCATTGTGGAGACCATCATGCCCGCTGATTACT...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAACTGTTGCTCCAAGGCTaGCACTTTCTCCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKLLLQG*HFLLGS
Trigger: ACTGCCCAGGAGAAAGTGGCAGCCTTGGAGCAACAG...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAAGCATCAGAACCTGTTaGTCCAAGGCTGCCACTTTC +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRSIRTC*SKAATF
Trigger: GAAAGTGGCAGCCTTGGAGCAACAGGTTCTGATGCT...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCTTGTCCATAAGCAGCTaGACGTGCTGCTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHALSISS*TCCCSS
Trigger: GGAGCTACAGCAGCACGTGCAGCTGCTTATGGACAA...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAGCTTGCAGATGACCTaGTGCTTGGCGTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHASLQMT*CLAWFL
Trigger: CAAGAACCACGCCAAGCAGCAGGTCATCTGCAAGCT...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACTGCTCTATCTTCCCCTaGTGGCTCAGGAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYCSIFP*WLRKSL
Trigger: CAGGGACTTCCTGAGCCAGCAGGGGAAGATAGAGCA...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAATGTCATCCTTCAGGTaGTCTATCTTCCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRMSSFR*SIFPCW
Trigger: CCAGCAGGGGAAGATAGAGCACCTGAAGGATGACAT...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGACCGGCCAGGTACTTaGTTTCCACCTGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKDRPGT*FPPGSF
Trigger: GAAACTGCCAGGTGGAAAGCAAGTACCTGGCCGGTC...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACCCTCTCCAGGTACTCTaGCTTAAGCTGCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYPLQVL*LKLLQL
Trigger: GAGCTGGAGCAGCTTAAGGCAGAGTACCTGGAGAGG...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAAGTTTACATGCCAAAGTaGTCTGTGGAAGAGGTGACG +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDEVYMPK*SVEEVT
Trigger: CGTCACCTCTTCCACAGAGCACTTTGGCATGTAAAC...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCTGGAGAATCTTCCCCTaGAGGTTCATGGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHAWRIFP*RFMACS
Trigger: GGAACAGGCCATGAACCTCCAGGGGAAGATTCTCCA...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCACCTGCTGCTTGGCGTaGTTCTTGTCCATAAGCAGC +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHATCCLA*FLSISS
Trigger: GCTGCTTATGGACAAGAACCACGCCAAGCAGCAGGT...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCTCTATCTTCCCCTGCTaGCTCAGGAAGTCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHASIFPC*LRKSLL
Trigger: CAACAGGGACTTCCTGAGCCAGCAGGGGAAGATAGA...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAAATCTTTGTGACCTGGTaGATCTCGGAGTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDEIFVTW*ISELRK
Trigger: CTTCCTCAACTCCGAGATCCACCAGGTCACAAAGAT...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGTACTTGCTTTCCACCTaGCAGTTTCTGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVYLLST*QFLAWR
Trigger: CCTCCAAGCCAGAAACTGCCAGGTGGAAAGCAAGTA...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACCGTGACTCCAATGCCTaGATCTTGGCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYRDSNA*ILASSF
Trigger: GAAGCTGCTGGCCAAGATCCAGGCATTGGAGTCACG...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATCGTGACTCCAATGCCTaGATCTTGGCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHRDSNA*ILASSF
Trigger: GAAGCTGCTGGCCAAGATCCAGGCATTGGAGTCACG...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACCAGTCCCCAGGTGCTTaGGGGAAATATTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYQSPGA*GKYSEG
Trigger: CCCTTCAGAATATTTCCCTCAAGCACCTGGGGACTG...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACTGGCGCTTGGCTTTCTaGGCGAAACTGATGGTCAGA +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYWRLAF*AKLMVR
Trigger: TCTGACCATCAGTTTCGCTCAGAAAGCCAAGCGCCA...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAATGGCGCTTGGCTTTCTaGGCGAAACTGATGGTCAGA +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKWRLAF*AKLMVR
Trigger: TCTGACCATCAGTTTCGCTCAGAAAGCCAAGCGCCA...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAATTCACTAGCTCCTTCTaGGACTTTAACTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDEFTSSF*DFNSLV
Trigger: CACCAAGGAGTTAAAGTCTCAGAAGGAGCTAGTGAA...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCTTCTCCAGATCTTTGTaGCCTGGTGGATCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHAFSRSL*PGGSRS
Trigger: ACTCCGAGATCCACCAGGTCACAAAGATCTGGAGAA...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCACTCATCATACTTACTaGTGGGGCTCAGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHATHHTY*WGSARC
Trigger: GCATCGAGCTGAGCCCCATCAGTAAGTATGATGAGT...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACTGGAGATGGTCTTGGTaGAGAAGCGCAGGTACTGGT +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYWRWSW*RSAGTG
Trigger: ACCAGTACCTGCGCTTCTTCACCAAGACCATCTCCA...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAAGGGGTTCATGTCATTaGAGGCGATGTTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRRGSCH*RRCSSA
Trigger: AGCTGATGAACATCGCCTTCAATGACATGAACCCCT...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACGCCACTGAACCACTCTaGCCCTCTGTTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYATEPL*PSVSSS
Trigger: AGATGAGGAAACAGAGGGTCAGAGTGGTTCAGTGGC...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375063.5
CDS-3UTR TCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAAGTCACACCCTCAAATaGGCCCCCAAAGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRSHTLK*APKASF
Trigger: AAAAGAAGCTTTGGGGGCTCATTTGAGGGTGTGACT...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375063.5
CDS-3UTR GCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGACTTACAGTCAAACACTaGACTGGAGAGGTCGATGCT +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRLTVKH*TGEVDA
Trigger: AGCATCGACCTCTCCAGTGCAGTGTTTGACTGTAAG...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGCTTACAGTCAAACACTaGACTGGAGAGGTCGATGCT +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEELTVKH*TGEVDA
Trigger: AGCATCGACCTCTCCAGTGCAGTGTTTGACTGTAAG...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAATTGTCCATAAGCAGCTaGACGTGCTGCTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKLSISS*TCCCSS
Trigger: GGAGCTACAGCAGCACGTGCAGCTGCTTATGGACAA...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACTTGCAGATGACCTGCTaGTTGGCGTGGTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYLQMTC*LAWFLS
Trigger: GGACAAGAACCACGCCAAGCAGCAGGTCATCTGCAA...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATTTGCAGATGACCTGCTaGTTGGCGTGGTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHLQMTC*LAWFLS
Trigger: GGACAAGAACCACGCCAAGCAGCAGGTCATCTGCAA...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAAGCTTGCAGATGACCTaGTGCTTGGCGTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKSLQMT*CLAWFL
Trigger: CAAGAACCACGCCAAGCAGCAGGTCATCTGCAAGCT...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCGTCAGCGTGTTaGAGTAGTAATCAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYMPSAC*SSNQRA
Trigger: TGCCCGCTGATTACTACTGCAACACGCTGACGGCAT...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAATGCCGTCAGCGTGTTaGAGTAGTAATCAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKMPSAC*SSNQRA
Trigger: TGCCCGCTGATTACTACTGCAACACGCTGACGGCAT...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCGCAGCTGTTTCATaGGGAAGGGGTTCATGTCAT +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHAAAVS*GRGSCH
Trigger: ATGACATGAACCCCTTCCGCATGAAACAGCTGCGGC...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGTTTACATGCCAAAGTaGTCTGTGGAAGAGGTGACG +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRVYMPK*SVEEVT
Trigger: CGTCACCTCTTCCACAGAGCACTTTGGCATGTAAAC...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTTTACATGCCAAAGTaGTCTGTGGAAGAGGTGACG +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEEVYMPK*SVEEVT
Trigger: CGTCACCTCTTCCACAGAGCACTTTGGCATGTAAAC...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAATTCATCTGCAGCTGCTaGAGCCAGTACAGCATCGCT +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKFICSC*SQYSIA
Trigger: AGCGATGCTGTACTGGCTGCAGCAGCTGCAGATGAA...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATCTTGGGTGCAGGCTTTaGAGAATCCTCTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHLGCRL*RILWLS
Trigger: AGAGAGCCAGAGGATTCTCCAAAGCCTGCACCCAAG...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAATCTATCTTCCCCTGCTaGCTCAGGAAGTCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKSIFPC*LRKSLL
Trigger: CAACAGGGACTTCCTGAGCCAGCAGGGGAAGATAGA...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGATCTTTGTGACCTGGTaGATCTCGGAGTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEEIFVTW*ISELRK
Trigger: CTTCCTCAACTCCGAGATCCACCAGGTCACAAAGAT...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCCAGATCTTTGTGACCTaGTGGATCTCGGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHAQIFVT*WISELR
Trigger: CCTCAACTCCGAGATCCACCAGGTCACAAAGATCTG...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATCTTTCTGAGCGAAACTaGTGGTCAGAGAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHLSERN*WSEKAW
Trigger: CCAAGCCTTCTCTGACCATCAGTTTCGCTCAGAAAG...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACCTTTCTGAGCGAAACTaGTGGTCAGAGAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYLSERN*WSEKAW
Trigger: CCAAGCCTTCTCTGACCATCAGTTTCGCTCAGAAAG...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGACAGTTCGGTTCCGTGTaGTTCCTTCAGAAAAGAATG +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRQFGSV*FLQKRM
Trigger: CATTCTTTTCTGAAGGAATCACACGGAACCGAACTG...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAACTTTAACTCCTTGGTaGGCATCAGAACCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: PYRGSALACLHAKVLCGRTLTPW*ASEPVA
Trigger: AGCAACAGGTTCTGATGCTCACCAAGGAGTTAAAGT...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAATTCTCCAGATCTTTGTaGCCTGGTGGATCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKFSRSL*PGGSRS
Trigger: ACTCCGAGATCCACCAGGTCACAAAGATCTGGAGAA...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACACTCATCATACTTACTaGTGGGGCTCAGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYTHHTY*WGSARC
Trigger: GCATCGAGCTGAGCCCCATCAGTAAGTATGATGAGT...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAGGGGTTCATGTCATTaGAGGCGATGTTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: RECSRLPYRGSALACLHARGSCH*RRCSSA
Trigger: AGCTGATGAACATCGCCTTCAATGACATGAACCCCT...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATAATTTAAGTCCTGGCTaGTGTTCTGGCTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHNLSPG*CSGWKA
Trigger: GGCCTTCCAGCCAGAACATCAGCCAGGACTTAAATT...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375063.5
CDS-3UTR GCA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGTTGCCACGGATGTTGTaGATTGTGTTCTGTATTTCA +
Preference number: 4 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLLPRML*IVFCIS
Trigger: TGAAATACAGAACACAATGCACAACATCCGTGGCAA...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAATGTCATCCTTCAGGTaGTCTATCTTCCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKMSSFR*SIFPCW
Trigger: CCAGCAGGGGAAGATAGAGCACCTGAAGGATGACAT...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAAGTCAAACACTGCACTaGAGAGGTCGATGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKSQTLH*RGRCCP
Trigger: TGGACAGCATCGACCTCTCCAGTGCAGTGTTTGACT...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACCAGATCTTTGTGACCTaGTGGATCTCGGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYQIFVT*WISELR
Trigger: CCTCAACTCCGAGATCCACCAGGTCACAAAGATCTG...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATTACTTGCTTTCCACCTaGCAGTTTCTGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHYLLST*QFLAWR
Trigger: CCTCCAAGCCAGAAACTGCCAGGTGGAAAGCAAGTA...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
3UTR CAA 72 bp GAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTaGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: ENVPGYPIEAVL*LVYMPKCSVEE
Trigger: CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGTAAGTAAGTGCCTATaGAGAAGTAGCCCAACCAAT +
Preference number: 4 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVVSKCL*RSSPTN
Trigger: ATTGGTTGGGCTACTTCTTCATAGGCACTTACTTAC...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGACCCTTCTCTATTCTTaGTGTCAGCATGATGTGGTA +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEETLLYS*CQHDVV
Trigger: TACCACATCATGCTGACATCAAGAATAGAGAAGGGT...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375063.5
CDS-3UTR GCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACCTTACAGTCAAACACTaGACTGGAGAGGTCGATGCT +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYLTVKH*TGEVDA
Trigger: AGCATCGACCTCTCCAGTGCAGTGTTTGACTGTAAG...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAATTGCCACGGATGTTGTaGATTGTGTTCTGTATTTCA +
Preference number: 4 (lower is better)
Translates to: GSALACLHAKVLCGRGDELPRML*IVFCIS
Trigger: TGAAATACAGAACACAATGCACAACATCCGTGGCAA...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTTTACATGCCAAAGTaGTCTGTGGAAGAGGTGACG +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKVYMPK*SVEEVT
Trigger: CGTCACCTCTTCCACAGAGCACTTTGGCATGTAAAC...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGTTTACATGCCAAAGTaGTCTGTGGAAGAGGTGACG +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHVYMPK*SVEEVT
Trigger: CGTCACCTCTTCCACAGAGCACTTTGGCATGTAAAC...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGTCTTGCTTGTTTACATaGCAAAGTGCTCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEESCLFT*QSALWK
Trigger: CTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGA...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAATCTTTGTGACCTGGTaGATCTCGGAGTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKIFVTW*ISELRK
Trigger: CTTCCTCAACTCCGAGATCCACCAGGTCACAAAGAT...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATACTTTAACTCCTTGGTaGGCATCAGAACCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: PRECSRLPYRGSALACLHTLTPW*ASEPVA
Trigger: AGCAACAGGTTCTGATGCTCACCAAGGAGTTAAAGT...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAACTTTAACTCCTTGGTaGGCATCAGAACCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKTLTPW*ASEPVA
Trigger: AGCAACAGGTTCTGATGCTCACCAAGGAGTTAAAGT...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAATTCACTAGCTCCTTCTaGGACTTTAACTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKFTSSF*DFNSLV
Trigger: CACCAAGGAGTTAAAGTCTCAGAAGGAGCTAGTGAA...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR TCA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACTTCTTGATGTCAGCATaGTGTGGTAAAGGGACCAGT +
Preference number: 4 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYFLMSA*CGKGTS
Trigger: ACTGGTCCCTTTACCACATCATGCTGACATCAAGAA...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375063.5
CDS-3UTR TCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTAAGTAAGTGCCTATaGAGAAGTAGCCCAACCAAT +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKVSKCL*RSSPTN
Trigger: ATTGGTTGGGCTACTTCTTCATAGGCACTTACTTAC...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR GCA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAATCTTGCTTGTTTACATaGCAAAGTGCTCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ECSRLPYRGSALACLHAKSCLFT*QSALWK
Trigger: CTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGA...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS GCA 90 bp CGCTCCTGCTCCAGGGCCTCCACCCGCCGGCCCAGCTCCGCGATCTaGCGCACTTTGTGCCGCACCAGCTCCAGCCGGTCCTTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: RSCSRASTRRPSSAI*RTLCRTSSSRSLSS
Trigger: TGAGGACAAGGACCGGCTGGAGCTGGTGCGGCACAAAGTGCGGCAGATCGCGGAGCTGGGCCGGCGGGTGGAGGCCCTGGAGCAGGAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp TCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGATGCCCGCCTCTCCAGGAGCACCCGGCGGAGCTaGTCGGGGAAGCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: SLAQPSDTALRRDARLSRSTRRS*SGKLEV
Trigger: CACCTCCAGCTTCCCCGACAAGCTCCGCCGGGTGCT...CCTGGAGAGGCGGGCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CAA 90 bp AGCCTCCAGCCGCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGAGCTCCAGCCGGTCCTaGTCCTCAGCCGCCGCCAGG +
Preference number: 5 (lower is better)
Translates to: SLQPLPVDHAQLPQLFHASSSRS*SSAAAR
Trigger: CCTGGCGGCGGCTGAGGACAAGGACCGGCTGGAGCT...CGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGGAGGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS CCA 90 bp GTGCTCGCGGGCCTGGCCCCGGCTCAGCAGTTCCTGGTAGCAGCCTaGAGTGTGCAGGTGCTGGACACGGAGGTGGACCAGCCACCTCCA +
Preference number: 5 (lower is better)
Translates to: VLAGLAPAQQFLVAA*SVQVLDTEVDQPPP
Trigger: TGGAGGTGGCTGGTCCACCTCCGTGTCCAGCACCTGCACACTCCAGGCTGCTACCAGGAACTGCTGAGCCGGGGCCAGGCCCGCGAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS TCA 90 bp CACGAGGCCGGTGTTCACGGGGTACTCCTGCCCGCAGTAGCTGCTTaGGCTCGGCTGAGGGCACAAGATCGCCCAGGGCAGCCCAGCGCT +
Preference number: 5 (lower is better)
Translates to: HEAGVHGVLLPAVAA*ARLRAQDRPGQPSA
Trigger: AGCGCTGGGCTGCCCTGGGCGATCTTGTGCCCTCAGCCGAGCTCAAGCAGCTACTGCGGGCAGGAGTACCCCGTGAACACCGGCCTCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS GCA 90 bp GACGGGCCCATTCCCAGCCAGGGCGGCATCAGGGGTGGCAGGAGGTaGCGGCGGGCTGTTGTGGAATTCCCAGCGCTTCATCTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: DGPIPSQGGIRGGRR*RRAVVEFPALHLQL
Trigger: CAGCTGCAGATGAAGCGCTGGGAATTCCACAACAGCCCGCCGGCACCTCCTGCCACCCCTGATGCCGCCCTGGCTGGGAATGGGCCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp ACCTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGATGCCCGCGCGGCCTCCAGTGCCTaGTGCAGGATCTTCACTAGC +
Preference number: 5 (lower is better)
Translates to: TSSSLAQPSDTALRRDARAASSA*CRIFTS
Trigger: GCTAGTGAAGATCCTGCACAAGGCACTGGAGGCCGC...GCGGGCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS GCA 90 bp CAGACACGAGGCCGGTGTTCACGGGGTACTCCTGCCCGCAGTAGCTaGTTGAGCTCGGCTGAGGGCACAAGATCGCCCAGGGCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: QTRGRCSRGTPARSS*LSSAEGTRSPRAAQ
Trigger: CTGGGCTGCCCTGGGCGATCTTGTGCCCTCAGCCGAGCTCAAGCAGCTACTGCGGGCAGGAGTACCCCGTGAACACCGGCCTCGTGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS CCA 90 bp GCCAGGGCGGCATCAGGGGTGGCAGGAGGTGCCGGCGGGCTGTTGTaGAATTCCCAGCGCTTCATCTGCAGCTGCTGCAGCCAGTACAGC +
Preference number: 5 (lower is better)
Translates to: ARAASGVAGGAGGLL*NSQRFICSCCSQYS
Trigger: GCTGTACTGGCTGCAGCAGCTGCAGATGAAGCGCTGGGAATTCCACAACAGCCCGCCGGCACCTCCTGCCACCCCTGATGCCGCCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CTCCACCTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGATGCTACCCACAGAGTTTCTaGGGGACCGCCTCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: LHLVLAGTALGHSSAPGCYPQSF*GTASRD
Trigger: GTCCCTGGAGGCGGTCCCCAAGAAACTCTGTGGGTA...GCATCCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CAA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACAGCTCCAGCCGGTCCTaGTCCTCAGCCGCCGCCAGG +
Preference number: 5 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHSSSRS*SSAAAR
Trigger: CCTGGCGGCGGCTGAGGACAAGGACCGGCTGGAGCT...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCCCCTCCACCTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGAGACCGGCCAGGTACTaGCTTTCCACCTGGCAGTTT +
Preference number: 5 (lower is better)
Translates to: PPPPRPRWHSPRTQLCAGRPARY*LSTWQF
Trigger: AAACTGCCAGGTGGAAAGCAAGTACCTGGCCGGTCT...CCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGTGGAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CAA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACAGCACCCGGCGGAGCTaGTCGGGGAAGCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDSTRRS*SGKLEV
Trigger: CACCTCCAGCTTCCCCGACAAGCTCCGCCGGGTGCT...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS GCA 90 bp TTGTCCTCAGCCGCCGCCAGGTATGCGCTGGACGCCCGCTTCTCCTaGTGGGCGGCCTCCAGTGCCTTGTGCAGGATCTTCACTAGCTCC +
Preference number: 5 (lower is better)
Translates to: LSSAAARYALDARFS*WAASSALCRIFTSS
Trigger: GGAGCTAGTGAAGATCCTGCACAAGGCACTGGAGGCCGCCCAGCAGGAGAAGCGGGCGTCCAGCGCATACCTGGCGGCGGCTGAGGACAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS CCA 90 bp TCCTCAGCCGCCGCCAGGTATGCGCTGGACGCCCGCTTCTCCTGCTaGGCGGCCTCCAGTGCCTTGTGCAGGATCTTCACTAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SSAAARYALDARFSC*AASSALCRIFTSSF
Trigger: GAAGGAGCTAGTGAAGATCCTGCACAAGGCACTGGAGGCCGCCCAGCAGGAGAAGCGGGCGTCCAGCGCATACCTGGCGGCGGCTGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS CCA 90 bp CGCTCCCTCAGCGGCCGATCCACAGCCTCGAGGCCCAGCAGGTGGTaGGATCGTGACTCCAATGCCTGGATCTTGGCCAGCAGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: RSLSGRSTASRPSRW*DRDSNAWILASSFR
Trigger: CCTGAAGCTGCTGGCCAAGATCCAGGCATTGGAGTCACGATCCCACCACCTGCTGGGCCTCGAGGCTGTGGATCGGCCGCTGAGGGAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS CCA 90 bp CAGCGCTCCCTCAGCGGCCGATCCACAGCCTCGAGGCCCAGCAGGTaGTGGGATCGTGACTCCAATGCCTGGATCTTGGCCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: QRSLSGRSTASRPSR*WDRDSNAWILASSF
Trigger: GAAGCTGCTGGCCAAGATCCAGGCATTGGAGTCACGATCCCACCACCTGCTGGGCCTCGAGGCTGTGGATCGGCCGCTGAGGGAGCGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS-3UTR CAA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACGCGATCTGCCGCACTTaGTGCCGCACCAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDAICRT*CRTSSS
Trigger: GCTGGAGCTGGTGCGGCACAAAGTGCGGCAGATCGC...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACGCCCGCAGTAGCTGCTaGAGCTCGGCTGAGGGCACA +
Preference number: 5 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDARSSC*SSAEGT
Trigger: TGTGCCCTCAGCCGAGCTCAAGCAGCTACTGCGGGC...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp TCGGACACAGCTCTGCGCCGGGATGCCCGCCTCTCCAGGTACTCTGCCTTAAGCGGTGCCGGCGGGCTGTaGTGGAATTCCCAGCGCTTC +
Preference number: 5 (lower is better)
Translates to: SDTALRRDARLSRYSALSGAGGL*WNSQRF
Trigger: GAAGCGCTGGGAATTCCACAACAGCCCGCCGGCACC...GCTTAAGGCAGAGTACCTGGAGAGGCGGGCATCCCGGCGCAGAGCTGTGTCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS GCA 90 bp GCGTGGTTCTTGTCCATAAGCAGCTGCACGTGCTGCTGTAGCTCCTaGACCTGCTGCTCCCGCAGGCTCGCTGTGTGCGCCAGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: AWFLSISSCTCCCSS*TCCSRRLAVCARLS
Trigger: GGAGAGCCTGGCGCACACAGCGAGCCTGCGGGAGCAGCAGGTGCAGGAGCTACAGCAGCACGTGCAGCTGCTTATGGACAAGAACCACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS GCA 90 bp CTCAGCAGCTCTGAGCACTCGCTGGCTTCGTCCCCCAGGGCCTCCTaGAGCCTTCTCAGACCGGCCAGGTACTTGCTTTCCACCTGGCAG +
Preference number: 5 (lower is better)
Translates to: LSSSEHSLASSPRAS*SLLRPARYLLSTWQ
Trigger: CTGCCAGGTGGAAAGCAAGTACCTGGCCGGTCTGAGAAGGCTGCAGGAGGCCCTGGGGGACGAAGCCAGCGAGTGCTCAGAGCTGCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AGCCTCCAGCCGCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGACCCGGCTGGGAGTCTaGATTTCGAAGATCCCCTCC +
Preference number: 5 (lower is better)
Translates to: SLQPLPVDHAQLPQLFHATRLGV*ISKIPS
Trigger: GGAGGGGATCTTCGAAATCAAGACTCCCAGCCGGGT...CGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS TCA 90 bp CAGCGGCCGATCCACAGCCTCGAGGCCCAGCAGGTGGTGGGATCGTaGCTCCAATGCCTGGATCTTGGCCAGCAGCTTCAGGTCTTCCAC +
Preference number: 5 (lower is better)
Translates to: QRPIHSLEAQQVVGS*LQCLDLGQQLQVFH
Trigger: GTGGAAGACCTGAAGCTGCTGGCCAAGATCCAGGCATTGGAGTCACGATCCCACCACCTGCTGGGCCTCGAGGCTGTGGATCGGCCGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS GCA 90 bp GGGCTCAGCTCGATGCTGTCAGATGAGGCCTCCCCAGCTTCCCACTaGAGTGCCTCCTGGACAAGCTGCCTCAGCAGCTCTGAGCACTCG +
Preference number: 5 (lower is better)
Translates to: GLSSMLSDEASPASH*SASWTSCLSSSEHS
Trigger: CGAGTGCTCAGAGCTGCTGAGGCAGCTTGTCCAGGAGGCACTGCAGTGGGAAGCTGGGGAGGCCTCATCTGACAGCATCGAGCTGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS GCA 90 bp GGTGCCGGCGGGCTGTTGTGGAATTCCCAGCGCTTCATCTGCAGCTaGTGCAGCCAGTACAGCATCGCTTGCTTGGTGGCGGCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: GAGGLLWNSQRFICS*CSQYSIACLVAAFR
Trigger: CCTGAAGGCCGCCACCAAGCAAGCGATGCTGTACTGGCTGCAGCAGCTGCAGATGAAGCGCTGGGAATTCCACAACAGCCCGCCGGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CCA 90 bp CAGTTGAAGGTGACGAGGGAGAGATCCACGTGGTGCTGCCCCAGATaGGCCATCAGCCTGGGCAGCTTCTCCGAGAGCAGGTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: QLKVTRERSTWCCPR*AISLGSFSESRSWS
Trigger: GCTCCAGGACCTGCTCTCGGAGAAGCTGCCCAGGCTGATGGCCCATCTGGGGCAGCACCACGTGGATCTCTCCCTCGTCACCTTCAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AGCCTCCAGCCGCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGTGCTTGGCGTGGTTCTaGTCCATAAGCAGCTGCACG +
Preference number: 5 (lower is better)
Translates to: SLQPLPVDHAQLPQLFHACLAWF*SISSCT
Trigger: CGTGCAGCTGCTTATGGACAAGAACCACGCCAAGCA...CGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGGAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CAA 90 bp GGTGGCCAAGTCAGGCTTCCCCCTCCACCTCGTCCTCGCTGGCACAGCCCTCGGCTGTTGGAGATGGTCTaGGTGAAGAAGCGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: GGQVRLPPPPRPRWHSPRLLEMV*VKKRRY
Trigger: GTACCTGCGCTTCTTCACCAAGACCATCTCCAACAG...CCGAGGGCTGTGCCAGCGAGGACGAGGTGGAGGGGGAAGCCTGACTTGGCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CAA 90 bp CCCCCTCCACCTCGTCCTCGCTGGCACAGCCCTCGGACACAGCTCTGCGCCGGGAAGGGGTTCATGTCATaGAAGGCGATGTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: PPPPRPRWHSPRTQLCAGKGFMS*KAMFIS
Trigger: GCTGATGAACATCGCCTTCAATGACATGAACCCCTT...CCCGGCGCAGAGCTGTGTCCGAGGGCTGTGCCAGCGAGGACGAGGTGGAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CAA 90 bp AGCCTCCAGCCGCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGCCCAACCAATGGCTTaGCAGCACACAATGTCCCAG +
Preference number: 5 (lower is better)
Translates to: SLQPLPVDHAQLPQLFHAAQPMA*QHTMSQ
Trigger: CTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGC...CGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGGAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS GCA 90 bp ACGAGGAACCAGTTGAAGGTGACGAGGGAGAGATCCACGTGGTGCTaGCCCAGATGGGCCATCAGCCTGGGCAGCTTCTCCGAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: TRNQLKVTRERSTWC*PRWAISLGSFSESR
Trigger: CCTGCTCTCGGAGAAGCTGCCCAGGCTGATGGCCCATCTGGGGCAGCACCACGTGGATCTCTCCCTCGTCACCTTCAACTGGTTCCTCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS GCA 90 bp GCCGGCGGGCTGTTGTGGAATTCCCAGCGCTTCATCTGCAGCTGCTaGAGCCAGTACAGCATCGCTTGCTTGGTGGCGGCCTTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: AGGLLWNSQRFICSC*SQYSIACLVAAFRV
Trigger: TACCCTGAAGGCCGCCACCAAGCAAGCGATGCTGTACTGGCTGCAGCAGCTGCAGATGAAGCGCTGGGAATTCCACAACAGCCCGCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTACCCACAGAGTTTCTaGGGGACCGCCTCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHYPQSF*GTASRD
Trigger: GTCCCTGGAGGCGGTCCCCAAGAAACTCTGTGGGTA...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGGGAGGTGGCCAAGTCAGGCTTCCCCCTCCACCTCGTCCTCGCTGGCACAGCCAAGAATGGGAAGGTGTaGTTCTGGCGCTTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: GEVAKSGFPLHLVLAGTAKNGKV*FWRLAF
Trigger: GAAAGCCAAGCGCCAGAACAACACCTTCCCATTCTT...GGCTGTGCCAGCGAGGACGAGGTGGAGGGGGAAGCCTGACTTGGCCACCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CAA 90 bp CCAGCCGCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGTGAAGTGTTTGTTGTaGGGGAAGGTCCGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: PAAPGGPCAAAAAVSCGRVKCLL*GKVRFR
Trigger: CCTGAACCGGACCTTCCCCAACAACAAACACTTCAC...CCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CAA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACTACAGCATCGCTTGCTaGGTGGCGGCCTTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDYSIAC*VAAFRV
Trigger: TACCCTGAAGGCCGCCACCAAGCAAGCGATGCTGTA...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS GCA 90 bp ATGACCTGCTGCTTGGCGTGGTTCTTGTCCATAAGCAGCTGCACGTaGTGCTGTAGCTCCTGCACCTGCTGCTCCCGCAGGCTCGCTGTG +
Preference number: 5 (lower is better)
Translates to: MTCCLAWFLSISSCT*CCSSCTCCSRRLAV
Trigger: CACAGCGAGCCTGCGGGAGCAGCAGGTGCAGGAGCTACAGCAGCACGTGCAGCTGCTTATGGACAAGAACCACGCCAAGCAGCAGGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CCA 90 bp CGAGGCCCAGCAGGTGGTGGGATCGTGACTCCAATGCCTGGATCTTaGCCAGCAGCTTCAGGTCTTCCACCTCATAGTCGGGCACCGTCA +
Preference number: 5 (lower is better)
Translates to: RGPAGGGIVTPMPGS*PAASGLPPHSRAPS
Trigger: TGACGGTGCCCGACTATGAGGTGGAAGACCTGAAGCTGCTGGCCAAGATCCAGGCATTGGAGTCACGATCCCACCACCTGCTGGGCCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS-3UTR CAA 90 bp TCAGCCTCCAGCCGCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGGAGCATCAGAACCTGTaGCTCCAAGGCTGCCACTTT +
Preference number: 5 (lower is better)
Translates to: SASSRSRWTMRSCRSCFMEHQNL*LQGCHF
Trigger: AAAGTGGCAGCCTTGGAGCAACAGGTTCTGATGCTC...CATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGCGGCTGGAGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CAA 90 bp GTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCATTGCGATCTGCCGCACTTaGTGCCGCACCAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: VDHAQLPQLFHAEGVHVIAICRT*CRTSSS
Trigger: GCTGGAGCTGGTGCGGCACAAAGTGCGGCAGATCGC...AATGACATGAACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CAA 90 bp TCGGACACAGCTCTGCGCCGGGATGCCCGCCTCTCCAGGTACTCTGCCTTAAGCTGGTGGATCTCGGAGTaGAGGAAGCAGTTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: SDTALRRDARLSRYSALSWWISE*RKQFWV
Trigger: GACCCAGAACTGCTTCCTCAACTCCGAGATCCACCA...GCTTAAGGCAGAGTACCTGGAGAGGCGGGCATCCCGGCGCAGAGCTGTGTCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CAA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACTGGTGGATCTCGGAGTaGAGGAAGCAGTTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDWWISE*RKQFWV
Trigger: GACCCAGAACTGCTTCCTCAACTCCGAGATCCACCA...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACGGGCAGGTGAAGTGTTaGTTGTTGGGGAAGGTCCGG +
Preference number: 5 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHGQVKC*LLGKVR
Trigger: CCGGACCTTCCCCAACAACAAACACTTCACCTGCCC...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACGCCCAACCAATGGCTTaGCAGCACACAATGTCCCAG +
Preference number: 5 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDAQPMA*QHTMSQ
Trigger: CTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGC...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS TCA 90 bp CCACCTGGGATGCCGTCAGCGTGTTGCAGTAGTAATCAGCGGGCATaGTGGTCTCCACAATGGCCACCAGGCACCAGAAGGCGCTCTCCT +
Preference number: 5 (lower is better)
Translates to: PPGMPSACCSSNQRA*WSPQWPPGTRRRSP
Trigger: AGGAGAGCGCCTTCTGGTGCCTGGTGGCCATTGTGGAGACCATCATGCCCGCTGATTACTACTGCAACACGCTGACGGCATCCCAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CCA 90 bp TGGGCCCTTTGCCGCCGAACTTACTTAAATACCCACAGAGTTTCTTaGGGACCGCCTCCAGGGACCGGGCGCAGTCCCCCGATTCTTCCT +
Preference number: 5 (lower is better)
Translates to: WALCRRTYLNTHRVS*GPPPGTGRSPPILP
Trigger: AGGAAGAATCGGGGGACTGCGCCCGGTCCCTGGAGGCGGTCCCCAAGAAACTCTGTGGGTATTTAAGTAAGTTCGGCGGCAAAGGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGGGAGGTGGCCAAGTCAGGCTTCCCCCTCCACCTCGTCCTCGCTGGCACAGCCCACGGATGTTGTGCATaGTGTTCTGTATTTCAGTCC +
Preference number: 5 (lower is better)
Translates to: GEVAKSGFPLHLVLAGTAHGCCA*CSVFQS
Trigger: GGACTGAAATACAGAACACAATGCACAACATCCGTG...GGCTGTGCCAGCGAGGACGAGGTGGAGGGGGAAGCCTGACTTGGCCACCTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CAA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACACCTTCTCAGAGAGCTaGCAGATGACCTGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDTFSES*QMTCCL
Trigger: CAAGCAGCAGGTCATCTGCAAGCTCTCTGAGAAGGT...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACGCCCAACCAATGGCTTaGCAGCACACAATGTCCCAG +
Preference number: 5 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHAQPMA*QHTMSQ
Trigger: CTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGC...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp TCGGACACAGCTCTGCGCCGGGATGCCCGCCTCTCCAGGTACTCTGCCTTAAGCGTTCATCAGCGGCTGTaGGAGATGGTCTTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: SDTALRRDARLSRYSALSVHQRL*EMVLVK
Trigger: CTTCACCAAGACCATCTCCAACAGCCGCTGATGAAC...GCTTAAGGCAGAGTACCTGGAGAGGCGGGCATCCCGGCGCAGAGCTGTGTCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CAA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACGTGAAGTGTTTGTTGTaGGGGAAGGTCCGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHVKCLL*GKVRFR
Trigger: CCTGAACCGGACCTTCCCCAACAACAAACACTTCAC...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACCAGGTGAAGTGTTTGTaGTTGGGGAAGGTCCGGTTC +
Preference number: 5 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHQVKCL*LGKVRF
Trigger: GAACCGGACCTTCCCCAACAACAAACACTTCACCTG...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACACCCGAAGGAGGATGTaGCTAATGAGACTGTCCGCA +
Preference number: 5 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHTRRRM*LMRLSA
Trigger: TGCGGACAGTCTCATTAGCAACATCCTCCTTCGGGT...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACCTGTTGGAGATGGTCTaGGTGAAGAAGCGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHLLEMV*VKKRRY
Trigger: GTACCTGCGCTTCTTCACCAAGACCATCTCCAACAG...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACAAGAATGGGAAGGTGTaGTTCTGGCGCTTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHKNGKV*FWRLAF
Trigger: GAAAGCCAAGCGCCAGAACAACACCTTCCCATTCTT...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS GCA 90 bp CGTCGTAGAAGAACCAGCGGGATTTCCAGCCCCGGATGGGCCCTTTaGCGCCGAACTTACTTAAATACCCACAGAGTTTCTTGGGGACCG +
Preference number: 5 (lower is better)
Translates to: RRRRTSGISSPGWAL*RRTYLNTHRVSWGP
Trigger: CGGTCCCCAAGAAACTCTGTGGGTATTTAAGTAAGTTCGGCGGCAAAGGGCCCATCCGGGGCTGGAAATCCCGCTGGTTCTTCTACGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS GCA 90 bp CCTCAGCGTCCGCCTTACAGTCAAACACTGCACTGGAGAGGTCGATaGTGTCCAAGGGATTGGCATCCTGAGCGGTCCGCGAGTAATACA +
Preference number: 5 (lower is better)
Translates to: PQRPPYSQTLHWRGR*CPRDWHPERSASNT
Trigger: TGTATTACTCGCGGACCGCTCAGGATGCCAATCCCTTGGACAGCATCGACCTCTCCAGTGCAGTGTTTGACTGTAAGGCGGACGCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS GCA 90 bp TGCGTGAAGTCCTGGGTGACCTTCTCAGAGAGCTTGCAGATGACCTaGTGCTTGGCGTGGTTCTTGTCCATAAGCAGCTGCACGTGCTGC +
Preference number: 5 (lower is better)
Translates to: CVKSWVTFSESLQMT*CLAWFLSISSCTCC
Trigger: GCAGCACGTGCAGCTGCTTATGGACAAGAACCACGCCAAGCAGCAGGTCATCTGCAAGCTCTCTGAGAAGGTCACCCAGGACTTCACGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CCA 90 bp TGGGTGACCTTCTCAGAGAGCTTGCAGATGACCTGCTGCTTGGCGTaGTTCTTGTCCATAAGCAGCTGCACGTGCTGCTGTAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: WVTFSESLQMTCCLA*FLSISSCTCCCSSC
Trigger: GCAGGAGCTACAGCAGCACGTGCAGCTGCTTATGGACAAGAACCACGCCAAGCAGCAGGTCATCTGCAAGCTCTCTGAGAAGGTCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACCACGGATGTTGTGCATaGTGTTCTGTATTTCAGTCC +
Preference number: 5 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDHGCCA*CSVFQS
Trigger: GGACTGAAATACAGAACACAATGCACAACATCCGTG...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAGCTCCAGCCGGTCCTaGTCCTCAGCCGCCGCCAGG +
Preference number: 5 (lower is better)
Translates to: RECSRLPYRGSALACLHASSSRS*SSAAAR
Trigger: CCTGGCGGCGGCTGAGGACAAGGACCGGCTGGAGCT...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGCTCAGGAAGTCCCTGTaGGCAGCGTCGGGGCGCAAA +
Preference number: 5 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLLRKSL*AASGRK
Trigger: TTTGCGCCCCGACGCTGCCAACAGGGACTTCCTGAG...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAAGCCCGCAGTAGCTGCTaGAGCTCGGCTGAGGGCACA +
Preference number: 5 (lower is better)
Translates to: GSALACLHAKVLCGRGDEARSSC*SSAEGT
Trigger: TGTGCCCTCAGCCGAGCTCAAGCAGCTACTGCGGGC...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGAGCACCCGGCGGAGCTaGTCGGGGAAGCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVSTRRS*SGKLEV
Trigger: CACCTCCAGCTTCCCCGACAAGCTCCGCCGGGTGCT...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS TCA 90 bp TGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCATTaGAGGCGATGTTCATCAGCTTCCGGCTGTTGGAGATGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: CAAAAAVSCGRGSCH*RRCSSASGCWRWSW
Trigger: CCAAGACCATCTCCAACAGCCGGAAGCTGATGAACATCGCCTTCAATGACATGAACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375066.6
ENST00000465784.7
CDS GCA 90 bp GTGAAGTCCTGGGTGACCTTCTCAGAGAGCTTGCAGATGACCTGCTaGTTGGCGTGGTTCTTGTCCATAAGCAGCTGCACGTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: VKSWVTFSESLQMTC*LAWFLSISSCTCCC
Trigger: ACAGCAGCACGTGCAGCTGCTTATGGACAAGAACCACGCCAAGCAGCAGGTCATCTGCAAGCTCTCTGAGAAGGTCACCCAGGACTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGGTTCCCTGGGCCTGCTaGTTGCCACGGATGTTGTGC +
Preference number: 5 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLVPWAC*LPRMLC
Trigger: GCACAACATCCGTGGCAACAAGCAGGCCCAGGGAAC...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGGCGGCCTCCAGTGCCTaGTGCAGGATCTTCACTAGC +
Preference number: 5 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLAASSA*CRIFTS
Trigger: GCTAGTGAAGATCCTGCACAAGGCACTGGAGGCCGC...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAAGCTCCAGCCGGTCCTaGTCCTCAGCCGCCGCCAGG +
Preference number: 5 (lower is better)
Translates to: ECSRLPYRGSALACLHAKSSSRS*SSAAAR
Trigger: CCTGGCGGCGGCTGAGGACAAGGACCGGCTGGAGCT...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGCGATCTGCCGCACTTaGTGCCGCACCAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVAICRT*CRTSSS
Trigger: GCTGGAGCTGGTGCGGCACAAAGTGCGGCAGATCGC...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGCGATCTGCCGCACTTaGTGCCGCACCAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PYRGSALACLHAKVLCGRAICRT*CRTSSS
Trigger: GCTGGAGCTGGTGCGGCACAAAGTGCGGCAGATCGC...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAACTCAGGAAGTCCCTGTaGGCAGCGTCGGGGCGCAAA +
Preference number: 5 (lower is better)
Translates to: GSALACLHAKVLCGRGDELRKSL*AASGRK
Trigger: TTTGCGCCCCGACGCTGCCAACAGGGACTTCCTGAG...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGCCCGCAGTAGCTGCTaGAGCTCGGCTGAGGGCACA +
Preference number: 5 (lower is better)
Translates to: PYRGSALACLHAKVLCGRARSSC*SSAEGT
Trigger: TGTGCCCTCAGCCGAGCTCAAGCAGCTACTGCGGGC...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCATTGAAGGCGATGTTCGGGCAGGTGAAGTGTTaGTTGTTGGGGAAGGTCCGG +
Preference number: 5 (lower is better)
Translates to: SCRSCFMRKGFMSLKAMFGQVKC*LLGKVR
Trigger: CCGGACCTTCCCCAACAACAAACACTTCACCTGCCC...GAACATCGCCTTCAATGACATGAACCCCTTCCGCATGAAACAGCTGCGGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CAA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAGCACCCGGCGGAGCTaGTCGGGGAAGCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: RECSRLPYRGSALACLHASTRRS*SGKLEV
Trigger: CACCTCCAGCTTCCCCGACAAGCTCCGCCGGGTGCT...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACTGGTCCGTGCCTGACAAGATCTCCTTCTCGTaGTACTTGAAAATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: QGHMVMGHPGLGHWSVPDKISFS*YLKMAK
Trigger: CTTGGCCATTTTCAAGTACAACGAGAAGGAGATCTT...GTCAGGCACGGACCAGTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000465784.7
CDS-3UTR CAA 90 bp GCTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCAAAGATCTCCTTCTCGTaGTACTTGAAAATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: APGGPCAAAAAVSCGRGSKISFS*YLKMAK
Trigger: CTTGGCCATTTTCAAGTACAACGAGAAGGAGATCTT...TGAACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CAA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACATAGAGGCAGTGCTCTaGCTTGTTTACATGCCAAAG +
Preference number: 5 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHIEAVL*LVYMPK
Trigger: CTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTAT...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGGTGCCGGCGGGCTGTaGTGGAATTCCCAGCGCTTC +
Preference number: 5 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEEGAGGL*WNSQRF
Trigger: GAAGCGCTGGGAATTCCACAACAGCCCGCCGGCACC...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CTCCCGGTGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATTTGTTGCCACGGATGTaGTGCATTGTGTTCTGTATT +
Preference number: 5 (lower is better)
Translates to: LPVDHAQLPQLFHAEGVHLLPRM*CIVFCI
Trigger: AATACAGAACACAATGCACAACATCCGTGGCAACAA...ATGAACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCACCGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CAA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGACTCAGGAAGTCCCTGTaGGCAGCGTCGGGGCGCAAA +
Preference number: 5 (lower is better)
Translates to: PYRGSALACLHAKVLCGRLRKSL*AASGRK
Trigger: TTTGCGCCCCGACGCTGCCAACAGGGACTTCCTGAG...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCGCCCGCAGTAGCTGCTaGAGCTCGGCTGAGGGCACA +
Preference number: 5 (lower is better)
Translates to: RECSRLPYRGSALACLHAARSSC*SSAEGT
Trigger: TGTGCCCTCAGCCGAGCTCAAGCAGCTACTGCGGGC...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAAGCACCCGGCGGAGCTaGTCGGGGAAGCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: ECSRLPYRGSALACLHAKSTRRS*SGKLEV
Trigger: CACCTCCAGCTTCCCCGACAAGCTCCGCCGGGTGCT...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGGAAGGGACATGTCCAAGGTCACATGGTGATGGGACACCCAGGGCTGGGCCACAAGATCTCCTTCTCGTaGTACTTGAAAATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: GKGHVQGHMVMGHPGLGHKISFS*YLKMAK
Trigger: CTTGGCCATTTTCAAGTACAACGAGAAGGAGATCTT...GTGGCCCAGCCCTGGGTGTCCCATCACCATGTGACCTTGGACATGTCCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000465784.7
CDS TCA 90 bp GTTGCTCCAAGGCTGCCACTTTCTCCTGGGCAGTTCGGTTCCGTGTaGTTCCTTCAGAAAAGAATGGGAAGGTGTTGTTCTGGCGCTTGG +
Preference number: 5 (lower is better)
Translates to: VAPRLPLSPGQFGSV*FLQKRMGRCCSGAW
Trigger: CCAAGCGCCAGAACAACACCTTCCCATTCTTTTCTGAAGGAATCACACGGAACCGAACTGCCCAGGAGAAAGTGGCAGCCTTGGAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS-3UTR CAA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGATACCCACAGAGTTTCTaGGGGACCGCCTCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: PYRGSALACLHAKVLCGRYPQSF*GTASRD
Trigger: GTCCCTGGAGGCGGTCCCCAAGAAACTCTGTGGGTA...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGTTCCCTGGGCCTGCTaGTTGCCACGGATGTTGTGC +
Preference number: 5 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVVPWAC*LPRMLC
Trigger: GCACAACATCCGTGGCAACAAGCAGGCCCAGGGAAC...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGCGGCCTCCAGTGCCTaGTGCAGGATCTTCACTAGC +
Preference number: 5 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEEAASSA*CRIFTS
Trigger: GCTAGTGAAGATCCTGCACAAGGCACTGGAGGCCGC...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGTGCTTGGCGTGGTTCTaGTCCATAAGCAGCTGCACG +
Preference number: 5 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLCLAWF*SISSCT
Trigger: CGTGCAGCTGCTTATGGACAAGAACCACGCCAAGCA...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCATTGAAGGCGATGTTCACCTTCTCAGAGAGCTaGCAGATGACCTGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: SCRSCFMRKGFMSLKAMFTFSES*QMTCCL
Trigger: CAAGCAGCAGGTCATCTGCAAGCTCTCTGAGAAGGT...GAACATCGCCTTCAATGACATGAACCCCTTCCGCATGAAACAGCTGCGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CAA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGAGACCGGCCAGGTACTaGCTTTCCACCTGGCAGTTT +
Preference number: 5 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLRPARY*LSTWQF
Trigger: AAACTGCCAGGTGGAAAGCAAGTACCTGGCCGGTCT...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGTCCAATGCCTGGATCTaGGCCAGCAGCTTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLSNAWI*ASSFRS
Trigger: AGACCTGAAGCTGCTGGCCAAGATCCAGGCATTGGA...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACGCCCGCAGTAGCTGCTaGAGCTCGGCTGAGGGCACA +
Preference number: 5 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYARSSC*SSAEGT
Trigger: TGTGCCCTCAGCCGAGCTCAAGCAGCTACTGCGGGC...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAATACAGCATCGCTTGCTaGGTGGCGGCCTTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: GSALACLHAKVLCGRGDEYSIAC*VAAFRV
Trigger: TACCCTGAAGGCCGCCACCAAGCAAGCGATGCTGTA...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS TCA 90 bp CACGGATGTTGTGCATTGTGTTCTGTATTTCAGTCCCCAGGTGCTTaGGGGAAATATTCTGAAGGGCAGGGAAGGGCTGCAAGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: HGCCALCSVFQSPGA*GKYSEGQGRAARQL
Trigger: CAGCTGCCTTGCAGCCCTTCCCTGCCCTTCAGAATATTTCCCTCAAGCACCTGGGGACTGAAATACAGAACACAATGCACAACATCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS TCA 90 bp AGAATGGGAAGGTGTTGTTCTGGCGCTTGGCTTTCTGAGCGAAACTaGTGGTCAGAGAAGGCTTGGGTGCAGGCTTTGGAGAATCCTCTG +
Preference number: 5 (lower is better)
Translates to: RMGRCCSGAWLSERN*WSEKAWVQALENPL
Trigger: CAGAGGATTCTCCAAAGCCTGCACCCAAGCCTTCTCTGACCATCAGTTTCGCTCAGAAAGCCAAGCGCCAGAACAACACCTTCCCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS GCA 90 bp TGTGGAGAATCTTCCCCTGGAGGTTCATGGCCTGTTCCCTGGGCCTaGTTGTTGCCACGGATGTTGTGCATTGTGTTCTGTATTTCAGTC +
Preference number: 5 (lower is better)
Translates to: CGESSPGGSWPVPWA*LLPRMLCIVFCISV
Trigger: GACTGAAATACAGAACACAATGCACAACATCCGTGGCAACAAGCAGGCCCAGGGAACAGGCCATGAACCTCCAGGGGAAGATTCTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAACCCGGCTGGGAGTCTaGATTTCGAAGATCCCCTCC +
Preference number: 5 (lower is better)
Translates to: PYRGSALACLHAKVLCGRTRLGV*ISKIPS
Trigger: GGAGGGGATCTTCGAAATCAAGACTCCCAGCCGGGT...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCGCGGCCTCCAGTGCCTaGTGCAGGATCTTCACTAGC +
Preference number: 5 (lower is better)
Translates to: RECSRLPYRGSALACLHAAASSA*CRIFTS
Trigger: GCTAGTGAAGATCCTGCACAAGGCACTGGAGGCCGC...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAATGGTGGATCTCGGAGTaGAGGAAGCAGTTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: GSALACLHAKVLCGRGDEWWISE*RKQFWV
Trigger: GACCCAGAACTGCTTCCTCAACTCCGAGATCCACCA...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGGTGAAGTGTTTGTTGTaGGGGAAGGTCCGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLVKCLL*GKVRFR
Trigger: CCTGAACCGGACCTTCCCCAACAACAAACACTTCAC...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGGGCAGGTGAAGTGTTaGTTGTTGGGGAAGGTCCGG +
Preference number: 5 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVGQVKC*LLGKVR
Trigger: CCGGACCTTCCCCAACAACAAACACTTCACCTGCCC...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGGCAGGTGAAGTGTTaGTTGTTGGGGAAGGTCCGG +
Preference number: 5 (lower is better)
Translates to: PYRGSALACLHAKVLCGRGQVKC*LLGKVR
Trigger: CCGGACCTTCCCCAACAACAAACACTTCACCTGCCC...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AGAAGTAGCCCAACCAATGGCTTTGCAGCACACAATGTCCCAGTGGGGAAACTGCTGTTGGAGATGGTCTaGGTGAAGAAGCGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: RSSPTNGFAAHNVPVGKLLLEMV*VKKRRY
Trigger: GTACCTGCGCTTCTTCACCAAGACCATCTCCAACAG...CAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGCTACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp TGGACCATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCATTGATAGAGGCAGTGCTCTaGCTTGTTTACATGCCAAAG +
Preference number: 5 (lower is better)
Translates to: WTMRSCRSCFMRKGFMSLIEAVL*LVYMPK
Trigger: CTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTAT...CAATGACATGAACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCATGGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS-3UTR CAA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGTACAGCATCGCTTGCTaGGTGGCGGCCTTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVYSIAC*VAAFRV
Trigger: TACCCTGAAGGCCGCCACCAAGCAAGCGATGCTGTA...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS TCA 90 bp CCTTCAGAAAAGAATGGGAAGGTGTTGTTCTGGCGCTTGGCTTTCTaGGCGAAACTGATGGTCAGAGAAGGCTTGGGTGCAGGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: PSEKNGKVLFWRLAF*AKLMVREGLGAGFG
Trigger: TCCAAAGCCTGCACCCAAGCCTTCTCTGACCATCAGTTTCGCTCAGAAAGCCAAGCGCCAGAACAACACCTTCCCATTCTTTTCTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS TCA 90 bp TCATTGAAGGCGATGTTCATCAGCGGCTGTTGGAGATGGTCTTGGTaGAGAAGCGCAGGTACTGGTAGATTTCCAGGCCATTCTGTAGCC +
Preference number: 5 (lower is better)
Translates to: SLKAMFISGCWRWSW*RSAGTGRFPGHSVA
Trigger: GGCTACAGAATGGCCTGGAAATCTACCAGTACCTGCGCTTCTTCACCAAGACCATCTCCAACAGCCGCTGATGAACATCGCCTTCAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS CCA 90 bp ATTTCCTTTCGTCGTAGAAGAACCAGCGGGATTTCCAGCCCCGGATaGGCCCTTTGCCGCCGAACTTACTTAAATACCCACAGAGTTTCT +
Preference number: 5 (lower is better)
Translates to: ISFRRRRTSGISSPG*ALCRRTYLNTHRVS
Trigger: AGAAACTCTGTGGGTATTTAAGTAAGTTCGGCGGCAAAGGGCCCATCCGGGGCTGGAAATCCCGCTGGTTCTTCTACGACGAAAGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CCA 90 bp TACAGTCAAACACTGCACTGGAGAGGTCGATGCTGTCCAAGGGATTaGCATCCTGAGCGGTCCGCGAGTAATACAGCTGACATTTCCTTT +
Preference number: 5 (lower is better)
Translates to: YSQTLHWRGRCCPRD*HPERSASNTADISF
Trigger: AAAGGAAATGTCAGCTGTATTACTCGCGGACCGCTCAGGATGCCAATCCCTTGGACAGCATCGACCTCTCCAGTGCAGTGTTTGACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CCA 90 bp TTGGTGAGCATCAGAACCTGTTGCTCCAAGGCTGCCACTTTCTCCTaGGCAGTTCGGTTCCGTGTGATTCCTTCAGAAAAGAATGGGAAG +
Preference number: 5 (lower is better)
Translates to: LVSIRTCCSKAATFS*AVRFRVIPSEKNGK
Trigger: CTTCCCATTCTTTTCTGAAGGAATCACACGGAACCGAACTGCCCAGGAGAAAGTGGCAGCCTTGGAGCAACAGGTTCTGATGCTCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS-3UTR CAA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACTACCCACAGAGTTTCTaGGGGACCGCCTCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYYPQSF*GTASRD
Trigger: GTCCCTGGAGGCGGTCCCCAAGAAACTCTGTGGGTA...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACGTTCCCTGGGCCTGCTaGTTGCCACGGATGTTGTGC +
Preference number: 5 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYVPWAC*LPRMLC
Trigger: GCACAACATCCGTGGCAACAAGCAGGCCCAGGGAAC...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAAGAGCATCAGAACCTGTaGCTCCAAGGCTGCCACTTT +
Preference number: 5 (lower is better)
Translates to: GSALACLHAKVLCGRGDEEHQNL*LQGCHF
Trigger: AAAGTGGCAGCCTTGGAGCAACAGGTTCTGATGCTC...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGATGCTTGGCGTGGTTCTaGTCCATAAGCAGCTGCACG +
Preference number: 5 (lower is better)
Translates to: PYRGSALACLHAKVLCGRCLAWF*SISSCT
Trigger: CGTGCAGCTGCTTATGGACAAGAACCACGCCAAGCA...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCCTGGCAGTTTCTGGCTaGGAGGTAGGCGCACTTCGT +
Preference number: 5 (lower is better)
Translates to: RECSRLPYRGSALACLHALAVSG*EVGALR
Trigger: ACGAAGTGCGCCTACCTCCAAGCCAGAAACTGCCAG...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGTCCAATGCCTGGATCTaGGCCAGCAGCTTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEESNAWI*ASSFRS
Trigger: AGACCTGAAGCTGCTGGCCAAGATCCAGGCATTGGA...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAAATCAGCTTCCGGCTGTaGGAGATGGTCTTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: GSALACLHAKVLCGRGDEISFRL*EMVLVK
Trigger: CTTCACCAAGACCATCTCCAACAGCCGGAAGCTGAT...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGCCCAACCAATGGCTTaGCAGCACACAATGTCCCAG +
Preference number: 5 (lower is better)
Translates to: PYRGSALACLHAKVLCGRAQPMA*QHTMSQ
Trigger: CTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGC...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATCCAGTACAGCATCGCTaGCTTGGTGGCGGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: PRECSRLPYRGSALACLHPVQHR*LGGGLQ
Trigger: CTGAAGGCCGCCACCAAGCAAGCGATGCTGTACTGG...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAACCAGTACAGCATCGCTaGCTTGGTGGCGGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: ECSRLPYRGSALACLHAKPVQHR*LGGGLQ
Trigger: CTGAAGGCCGCCACCAAGCAAGCGATGCTGTACTGG...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACCCAGTACAGCATCGCTaGCTTGGTGGCGGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYPVQHR*LGGGLQ
Trigger: CTGAAGGCCGCCACCAAGCAAGCGATGCTGTACTGG...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS TCA 90 bp TTTCCAGGCCATTCTGTAGCCTCAAGATCTCCTTCTCGTTGTACTTaGAAATGGCCAAGGCATAGCGAAACACCACCTTCGTCCCCTCGT +
Preference number: 5 (lower is better)
Translates to: FPGHSVASRSPSRCT*KWPRHSETPPSSPR
Trigger: ACGAGGGGACGAAGGTGGTGTTTCGCTATGCCTTGGCCATTTTCAAGTACAACGAGAAGGAGATCTTGAGGCTACAGAATGGCCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000465784.7
CDS-3UTR CAA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACCCCCGGATGGGCCCTTaGCCGCCGAACTTACTTAAA +
Preference number: 5 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYPRMGP*PPNLLK
Trigger: TTTAAGTAAGTTCGGCGGCAAAGGGCCCATCCGGGG...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAACCCGGCTGGGAGTCTaGATTTCGAAGATCCCCTCC +
Preference number: 5 (lower is better)
Translates to: ECSRLPYRGSALACLHAKTRLGV*ISKIPS
Trigger: GGAGGGGATCTTCGAAATCAAGACTCCCAGCCGGGT...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATACCCGGCTGGGAGTCTaGATTTCGAAGATCCCCTCC +
Preference number: 5 (lower is better)
Translates to: PRECSRLPYRGSALACLHTRLGV*ISKIPS
Trigger: GGAGGGGATCTTCGAAATCAAGACTCCCAGCCGGGT...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAAAAGAATGGGAAGGTGTaGTTCTGGCGCTTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: GSALACLHAKVLCGRGDEKNGKV*FWRLAF
Trigger: GAAAGCCAAGCGCCAGAACAACACCTTCCCATTCTT...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGAGCATCAGAACCTGTaGCTCCAAGGCTGCCACTTT +
Preference number: 5 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEEEHQNL*LQGCHF
Trigger: AAAGTGGCAGCCTTGGAGCAACAGGTTCTGATGCTC...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCTGCTTGGCGTGGTTCTaGTCCATAAGCAGCTGCACG +
Preference number: 5 (lower is better)
Translates to: RECSRLPYRGSALACLHACLAWF*SISSCT
Trigger: CGTGCAGCTGCTTATGGACAAGAACCACGCCAAGCA...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAACTGGCAGTTTCTGGCTaGGAGGTAGGCGCACTTCGT +
Preference number: 5 (lower is better)
Translates to: ECSRLPYRGSALACLHAKLAVSG*EVGALR
Trigger: ACGAAGTGCGCCTACCTCCAAGCCAGAAACTGCCAG...TTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATCTGGCAGTTTCTGGCTaGGAGGTAGGCGCACTTCGT +
Preference number: 5 (lower is better)
Translates to: PRECSRLPYRGSALACLHLAVSG*EVGALR
Trigger: ACGAAGTGCGCCTACCTCCAAGCCAGAAACTGCCAG...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAGACCGGCCAGGTACTaGCTTTCCACCTGGCAGTTT +
Preference number: 5 (lower is better)
Translates to: RECSRLPYRGSALACLHARPARY*LSTWQF
Trigger: AAACTGCCAGGTGGAAAGCAAGTACCTGGCCGGTCT...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCTCCAATGCCTGGATCTaGGCCAGCAGCTTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RECSRLPYRGSALACLHASNAWI*ASSFRS
Trigger: AGACCTGAAGCTGCTGGCCAAGATCCAGGCATTGGA...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGAAGTGTTTGTTGTaGGGGAAGGTCCGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEEVKCLL*GKVRFR
Trigger: CCTGAACCGGACCTTCCCCAACAACAAACACTTCAC...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGTGAAGTGTTTGTTGTaGGGGAAGGTCCGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: PYRGSALACLHAKVLCGRVKCLL*GKVRFR
Trigger: CCTGAACCGGACCTTCCCCAACAACAAACACTTCAC...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGCAGGTGAAGTGTTTGTaGTTGGGGAAGGTCCGGTTC +
Preference number: 5 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEEQVKCL*LGKVRF
Trigger: GAACCGGACCTTCCCCAACAACAAACACTTCACCTG...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGCAGGTGAAGTGTTTGTaGTTGGGGAAGGTCCGGTTC +
Preference number: 5 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVQVKCL*LGKVRF
Trigger: GAACCGGACCTTCCCCAACAACAAACACTTCACCTG...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGGGCAGGTGAAGTGTTaGTTGTTGGGGAAGGTCCGG +
Preference number: 5 (lower is better)
Translates to: PRECSRLPYRGSALACLHGQVKC*LLGKVR
Trigger: CCGGACCTTCCCCAACAACAAACACTTCACCTGCCC...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGCTGTTGGAGATGGTCTaGGTGAAGAAGCGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEELLEMV*VKKRRY
Trigger: GTACCTGCGCTTCTTCACCAAGACCATCTCCAACAG...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CCA 90 bp TTTCTCCTGGGCAGTTCGGTTCCGTGTGATTCCTTCAGAAAAGAATaGGAAGGTGTTGTTCTGGCGCTTGGCTTTCTGAGCGAAACTGAT +
Preference number: 5 (lower is better)
Translates to: FLLGSSVPCDSFRKE*EGVVLALGFLSETD
Trigger: ATCAGTTTCGCTCAGAAAGCCAAGCGCCAGAACAACACCTTCCCATTCTTTTCTGAAGGAATCACACGGAACCGAACTGCCCAGGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGAAGAATGGGAAGGTGTaGTTCTGGCGCTTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEEKNGKV*FWRLAF
Trigger: GAAAGCCAAGCGCCAGAACAACACCTTCCCATTCTT...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACAGACCGGCCAGGTACTaGCTTTCCACCTGGCAGTTT +
Preference number: 5 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYRPARY*LSTWQF
Trigger: AAACTGCCAGGTGGAAAGCAAGTACCTGGCCGGTCT...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCCTGTTGGAGATGGTCTaGGTGAAGAAGCGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: RECSRLPYRGSALACLHALLEMV*VKKRRY
Trigger: GTACCTGCGCTTCTTCACCAAGACCATCTCCAACAG...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCATCAGCTTCCGGCTGTaGGAGATGGTCTTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: RECSRLPYRGSALACLHAISFRL*EMVLVK
Trigger: CTTCACCAAGACCATCTCCAACAGCCGGAAGCTGAT...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAAAAGGGGTTCATGTCATaGAAGGCGATGTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: GSALACLHAKVLCGRGDEKGFMS*KAMFIS
Trigger: GCTGATGAACATCGCCTTCAATGACATGAACCCCTT...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACGCCCAACCAATGGCTTaGCAGCACACAATGTCCCAG +
Preference number: 5 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYAQPMA*QHTMSQ
Trigger: CTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGGC...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGAAGATCTCCTTCTCGTaGTACTTCGTCCCCTCGTAC +
Preference number: 5 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEEKISFS*YFVPSY
Trigger: GTACGAGGGGACGAAGTACAACGAGAAGGAGATCTT...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375066.6
CDS-3UTR CAA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACCAGCTCTGCCTCTTCTaGCCCTTCAGGGTAATAACC +
Preference number: 5 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYQLCLF*PFRVIT
Trigger: GGTTATTACCCTGAAGGGCAAGAAGAGGCAGAGCTG...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342112.9
CDS-3UTR CAA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAACACGGATGTTGTGCATaGTGTTCTGTATTTCAGTCC +
Preference number: 5 (lower is better)
Translates to: GSALACLHAKVLCGRGDEHGCCA*CSVFQS
Trigger: GGACTGAAATACAGAACACAATGCACAACATCCGTG...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGAGCATCAGAACCTGTaGCTCCAAGGCTGCCACTTT +
Preference number: 5 (lower is better)
Translates to: PRECSRLPYRGSALACLHEHQNL*LQGCHF
Trigger: AAAGTGGCAGCCTTGGAGCAACAGGTTCTGATGCTC...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACACCTTCTCAGAGAGCTaGCAGATGACCTGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYTFSES*QMTCCL
Trigger: CAAGCAGCAGGTCATCTGCAAGCTCTCTGAGAAGGT...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATCAGGTGAAGTGTTTGTaGTTGGGGAAGGTCCGGTTC +
Preference number: 5 (lower is better)
Translates to: PRECSRLPYRGSALACLHQVKCL*LGKVRF
Trigger: GAACCGGACCTTCCCCAACAACAAACACTTCACCTG...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATACCCGAAGGAGGATGTaGCTAATGAGACTGTCCGCA +
Preference number: 5 (lower is better)
Translates to: PRECSRLPYRGSALACLHTRRRM*LMRLSA
Trigger: TGCGGACAGTCTCATTAGCAACATCCTCCTTCGGGT...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACACCCGAAGGAGGATGTaGCTAATGAGACTGTCCGCA +
Preference number: 5 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYTRRRM*LMRLSA
Trigger: TGCGGACAGTCTCATTAGCAACATCCTCCTTCGGGT...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATCAGCTTCCGGCTGTaGGAGATGGTCTTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYISFRL*EMVLVK
Trigger: CTTCACCAAGACCATCTCCAACAGCCGGAAGCTGAT...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGAAGGGGTTCATGTCATaGAAGGCGATGTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVKGFMS*KAMFIS
Trigger: GCTGATGAACATCGCCTTCAATGACATGAACCCCTT...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGGTGACGAAAAGATCTCCTTCTCGTaGTACTTGAAAATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: GSALACLHAKVLCGRGDEKISFS*YLKMAK
Trigger: CTTGGCCATTTTCAAGTACAACGAGAAGGAGATCTT...TTCGTCACCTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000465784.7
CDS-3UTR CAA 90 bp AGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAGGGGTTCATGTCATaGAAGGCGATGTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: RECSRLPYRGSALACLHAKGFMS*KAMFIS
Trigger: GCTGATGAACATCGCCTTCAATGACATGAACCCCTT...GGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGATAGAGGCAGTGCTCTaGCTTGTTTACATGCCAAAG +
Preference number: 5 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEEIEAVL*LVYMPK
Trigger: CTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTAT...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGAGTTGTTGCCACGGATGTaGTGCATTGTGTTCTGTATT +
Preference number: 5 (lower is better)
Translates to: PIEAVLLLVYMPKCSVEELLPRM*CIVFCI
Trigger: AATACAGAACACAATGCACAACATCCGTGGCAACAA...CTCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp GGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGTTGTTGCCACGGATGTaGTGCATTGTGTTCTGTATT +
Preference number: 5 (lower is better)
Translates to: GYPIEAVLLLVYMPKCSVLLPRM*CIVFCI
Trigger: AATACAGAACACAATGCACAACATCCGTGGCAACAA...CACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCCTATAGAGGCAGTGCTCTTGCTTGTTTACATGCCAAAGTGCTCTGTGGAAGATTGTTGCCACGGATGTaGTGCATTGTGTTCTGTATT +
Preference number: 5 (lower is better)
Translates to: PYRGSALACLHAKVLCGRLLPRM*CIVFCI
Trigger: AATACAGAACACAATGCACAACATCCGTGGCAACAA...TCTTCCACAGAGCACTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTATAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACAAGGGGTTCATGTCATaGAAGGCGATGTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYKGFMS*KAMFIS
Trigger: GCTGATGAACATCGCCTTCAATGACATGAACCCCTT...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp CCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATCACGGATGTTGTGCATaGTGTTCTGTATTTCAGTCC +
Preference number: 5 (lower is better)
Translates to: PRECSRLPYRGSALACLHHGCCA*CSVFQS
Trigger: GGACTGAAATACAGAACACAATGCACAACATCCGTG...ATGTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS-3UTR CAA 90 bp AACCTAGAGAATGTTCCAGGTTACCCTATAGAGGCAGTGCTCTTGCTTGTTTACATAGAGGCAGTGCTCTaGCTTGTTTACATGCCAAAG +
Preference number: 5 (lower is better)
Translates to: NLENVPGYPIEAVLLLVYIEAVL*LVYMPK
Trigger: CTTTGGCATGTAAACAAGCAAGAGCACTGCCTCTAT...GTAAACAAGCAAGAGCACTGCCTCTATAGGGTAACCTGGAACATTCTCTAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS GCA 72 bp TCCAGGGCCTCCACCCGCCGGCCCAGCTCCGCGATCTaGCGCACTTTGTGCCGCACCAGCTCCAGCCGGTCC +
Preference number: 6 (lower is better)
Translates to: SRASTRRPSSAI*RTLCRTSSSRS
Trigger: GGACCGGCTGGAGCTGGTGCGGCACAAAGTGCGGCAGATCGCGGAGCTGGGCCGGCGGGTGGAGGCCCTGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS GCA 72 bp TCTCCCCAGCGCCCTCCATCGCTGCCAGCCGGAGACTaGGGAGGGACGAGGGGTCCGCGGGACCACCAGGGA +
Preference number: 6 (lower is better)
Translates to: SPQRPPSLPAGD*GGTRGPRDHQG
Trigger: TCCCTGGTGGTCCCGCGGACCCCTCGTCCCTCCGCAGTCTCCGGCTGGCAGCGATGGAGGGCGCTGGGGAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375066.6
ENST00000465784.7
CDS GCA 72 bp CTCCAGCCGGTCCTTGTCCTCAGCCGCCGCCAGGTATaGGCTGGACGCCCGCTTCTCCTGCTGGGCGGCCTC +
Preference number: 6 (lower is better)
Translates to: LQPVLVLSRRQV*AGRPLLLLGGL
Trigger: GAGGCCGCCCAGCAGGAGAAGCGGGCGTCCAGCGCATACCTGGCGGCGGCTGAGGACAAGGACCGGCTGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS CCA 72 bp GCCGGTCCTTGTCCTCAGCCGCCGCCAGGTATGCGCTaGACGCCCGCTTCTCCTGCTGGGCGGCCTCCAGTG +
Preference number: 6 (lower is better)
Translates to: AGPCPQPPPGMR*TPASPAGRPPV
Trigger: CACTGGAGGCCGCCCAGCAGGAGAAGCGGGCGTCCAGCGCATACCTGGCGGCGGCTGAGGACAAGGACCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS GCA 72 bp CGGTTCAGGTCCAGCTCAATCTGGCGGGCAGCAGGGTaGTCGCGGGCCTGGCCCCGGCTCAGCAGTTCCTGG +
Preference number: 6 (lower is better)
Translates to: RFRSSSIWRAAG*SRAWPRLSSSW
Trigger: CCAGGAACTGCTGAGCCGGGGCCAGGCCCGCGAGCACCCTGCTGCCCGCCAGATTGAGCTGGACCTGAACCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS CAA 90 bp ACACGAGGCCGGTGTTCACGGGGTACTCCTGCCCGCAGTAGCTGCTaGAGCTCGGCTGAGGGCACAAGATCGCCCAGGGCAGCCCAGCGC +
Preference number: 6 (lower is better)
Translates to: TRGRCSRGTPARSSC*SSAEGTRSPRAAQR
Trigger: GCGCTGGGCTGCCCTGGGCGATCTTGTGCCCTCAGCCGAGCTCAAGCAGCTACTGCGGGCAGGAGTACCCCGTGAACACCGGCCTCGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS CAA 90 bp CCAGCCAGGGCGGCATCAGGGGTGGCAGGAGGTGCCGGCGGGCTGTaGTGGAATTCCCAGCGCTTCATCTGCAGCTGCTGCAGCCAGTAC +
Preference number: 6 (lower is better)
Translates to: PARAASGVAGGAGGL*WNSQRFICSCCSQY
Trigger: GTACTGGCTGCAGCAGCTGCAGATGAAGCGCTGGGAATTCCACAACAGCCCGCCGGCACCTCCTGCCACCCCTGATGCCGCCCTGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS GCA 72 bp GGCCGGTGTTCACGGGGTACTCCTGCCCGCAGTAGCTaGTTGAGCTCGGCTGAGGGCACAAGATCGCCCAGG +
Preference number: 6 (lower is better)
Translates to: GRCSRGTPARSS*LSSAEGTRSPR
Trigger: CCTGGGCGATCTTGTGCCCTCAGCCGAGCTCAAGCAGCTACTGCGGGCAGGAGTACCCCGTGAACACCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS CCA 72 bp GCCGCCAGGTATGCGCTGGACGCCCGCTTCTCCTGCTaGGCGGCCTCCAGTGCCTTGTGCAGGATCTTCACT +
Preference number: 6 (lower is better)
Translates to: AARYALDARFSC*AASSALCRIFT
Trigger: AGTGAAGATCCTGCACAAGGCACTGGAGGCCGCCCAGCAGGAGAAGCGGGCGTCCAGCGCATACCTGGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS TCA 72 bp GGTGTTCACGGGGTACTCCTGCCCGCAGTAGCTGCTTaGGCTCGGCTGAGGGCACAAGATCGCCCAGGGCAG +
Preference number: 6 (lower is better)
Translates to: GVHGVLLPAVAA*ARLRAQDRPGQ
Trigger: CTGCCCTGGGCGATCTTGTGCCCTCAGCCGAGCTCAAGCAGCTACTGCGGGCAGGAGTACCCCGTGAACACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS GCA 72 bp ATTCCCAGCCAGGGCGGCATCAGGGGTGGCAGGAGGTaGCGGCGGGCTGTTGTGGAATTCCCAGCGCTTCAT +
Preference number: 6 (lower is better)
Translates to: IPSQGGIRGGRR*RRAVVEFPALH
Trigger: ATGAAGCGCTGGGAATTCCACAACAGCCCGCCGGCACCTCCTGCCACCCCTGATGCCGCCCTGGCTGGGAAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CCA 72 bp AGCGGCCGATCCACAGCCTCGAGGCCCAGCAGGTGGTaGGATCGTGACTCCAATGCCTGGATCTTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: SGRSTASRPSRW*DRDSNAWILAS
Trigger: GCTGGCCAAGATCCAGGCATTGGAGTCACGATCCCACCACCTGCTGGGCCTCGAGGCTGTGGATCGGCCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS CAA 72 bp CGGTGTTCACGGGGTACTCCTGCCCGCAGTAGCTGCTaGAGCTCGGCTGAGGGCACAAGATCGCCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: RCSRGTPARSSC*SSAEGTRSPRA
Trigger: TGCCCTGGGCGATCTTGTGCCCTCAGCCGAGCTCAAGCAGCTACTGCGGGCAGGAGTACCCCGTGAACACCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS CCA 72 bp GCTCTATCTTCCCCTGCTGGCTCAGGAAGTCCCTGTTaGCAGCGTCGGGGCGCAAAGGAGACTGGTCAGGGG +
Preference number: 6 (lower is better)
Translates to: ALSSPAGSGSPC*QRRGAKETGQG
Trigger: CCCCTGACCAGTCTCCTTTGCGCCCCGACGCTGCCAACAGGGACTTCCTGAGCCAGCAGGGGAAGATAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CAA 72 bp ACAAGCTGCCTCAGCAGCTCCGCGATCTGCCGCACTTaGTGCCGCACCAGCTCCAGCCGGTCCTTGTCCTCA +
Preference number: 6 (lower is better)
Translates to: TSCLSSSAICRT*CRTSSSRSLSS
Trigger: TGAGGACAAGGACCGGCTGGAGCTGGTGCGGCACAAAGTGCGGCAGATCGCGGAGCTGCTGAGGCAGCTTGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493589.2
CDS CCA 72 bp TGCCGCCGAACTTACTTAAATACCCACAGAGTTTCTTaGGGACCGCCTCCAGGGACCGGGCGCAGTCCCCCG +
Preference number: 6 (lower is better)
Translates to: CRRTYLNTHRVS*GPPPGTGRSPP
Trigger: CGGGGGACTGCGCCCGGTCCCTGGAGGCGGTCCCCAAGAAACTCTGTGGGTATTTAAGTAAGTTCGGCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS TCA 72 bp ATCCACAGCCTCGAGGCCCAGCAGGTGGTGGGATCGTaGCTCCAATGCCTGGATCTTGGCCAGCAGCTTCAG +
Preference number: 6 (lower is better)
Translates to: IHSLEAQQVVGS*LQCLDLGQQLQ
Trigger: CTGAAGCTGCTGGCCAAGATCCAGGCATTGGAGTCACGATCCCACCACCTGCTGGGCCTCGAGGCTGTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS GCA 72 bp GGGCCTCCTGCAGCCTTCTCAGACCGGCCAGGTACTTaGTTTCCACCTGGCAGTTTCTGGCTTGGAGGTAGG +
Preference number: 6 (lower is better)
Translates to: GPPAAFSDRPGT*FPPGSFWLGGR
Trigger: CCTACCTCCAAGCCAGAAACTGCCAGGTGGAAAGCAAGTACCTGGCCGGTCTGAGAAGGCTGCAGGAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS GCA 72 bp GCCGGCGGGCTGTTGTGGAATTCCCAGCGCTTCATCTaGAGCTGCTGCAGCCAGTACAGCATCGCTTGCTTG +
Preference number: 6 (lower is better)
Translates to: AGGLLWNSQRFI*SCCSQYSIACL
Trigger: CAAGCAAGCGATGCTGTACTGGCTGCAGCAGCTGCAGATGAAGCGCTGGGAATTCCACAACAGCCCGCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CCA 72 bp TCCATGTCATCCTTCAGGTGCTCTATCTTCCCCTGCTaGCTCAGGAAGTCCCTGTTGGCAGCGTCGGGGCGC +
Preference number: 6 (lower is better)
Translates to: SMSSFRCSIFPC*LRKSLLAASGR
Trigger: GCGCCCCGACGCTGCCAACAGGGACTTCCTGAGCCAGCAGGGGAAGATAGAGCACCTGAAGGATGACATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CAA 72 bp TTGCCGCCGAACTTACTTAAATACCCACAGAGTTTCTaGGGGACCGCCTCCAGGGACCGGGCGCAGTCCCCC +
Preference number: 6 (lower is better)
Translates to: LPPNLLKYPQSF*GTASRDRAQSP
Trigger: GGGGGACTGCGCCCGGTCCCTGGAGGCGGTCCCCAAGAAACTCTGTGGGTATTTAAGTAAGTTCGGCGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CAA 90 bp ATGGGCCCTTTGCCGCCGAACTTACTTAAATACCCACAGAGTTTCTaGGGGACCGCCTCCAGGGACCGGGCGCAGTCCCCCGATTCTTCC +
Preference number: 6 (lower is better)
Translates to: MGPLPPNLLKYPQSF*GTASRDRAQSPDSS
Trigger: GGAAGAATCGGGGGACTGCGCCCGGTCCCTGGAGGCGGTCCCCAAGAAACTCTGTGGGTATTTAAGTAAGTTCGGCGGCAAAGGGCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS GCA 72 bp CCGCCTTACAGTCAAACACTGCACTGGAGAGGTCGATaGTGTCCAAGGGATTGGCATCCTGAGCGGTCCGCG +
Preference number: 6 (lower is better)
Translates to: PPYSQTLHWRGR*CPRDWHPERSA
Trigger: CGCGGACCGCTCAGGATGCCAATCCCTTGGACAGCATCGACCTCTCCAGTGCAGTGTTTGACTGTAAGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CCA 72 bp GACCGGCCAGGTACTTGCTTTCCACCTGGCAGTTTCTaGCTTGGAGGTAGGCGCACTTCGTCAGAAGGGCCT +
Preference number: 6 (lower is better)
Translates to: DRPGTCFPPGSF*LGGRRTSSEGP
Trigger: AGGCCCTTCTGACGAAGTGCGCCTACCTCCAAGCCAGAAACTGCCAGGTGGAAAGCAAGTACCTGGCCGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CCA 72 bp AGGCCCAGCAGGTGGTGGGATCGTGACTCCAATGCCTaGATCTTGGCCAGCAGCTTCAGGTCTTCCACCTCA +
Preference number: 6 (lower is better)
Translates to: RPSRWWDRDSNA*ILASSFRSSTS
Trigger: TGAGGTGGAAGACCTGAAGCTGCTGGCCAAGATCCAGGCATTGGAGTCACGATCCCACCACCTGCTGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS CCA 72 bp GCAGGTGGTGGGATCGTGACTCCAATGCCTGGATCTTaGCCAGCAGCTTCAGGTCTTCCACCTCATAGTCGG +
Preference number: 6 (lower is better)
Translates to: AGGGIVTPMPGS*PAASGLPPHSR
Trigger: CCGACTATGAGGTGGAAGACCTGAAGCTGCTGGCCAAGATCCAGGCATTGGAGTCACGATCCCACCACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS CAA 72 bp GGGTGCGTGAAGTCCTGGGTGACCTTCTCAGAGAGCTaGCAGATGACCTGCTGCTTGGCGTGGTTCTTGTCC +
Preference number: 6 (lower is better)
Translates to: GCVKSWVTFSES*QMTCCLAWFLS
Trigger: GGACAAGAACCACGCCAAGCAGCAGGTCATCTGCAAGCTCTCTGAGAAGGTCACCCAGGACTTCACGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CAA 72 bp GTGGCGGCCTTCAGGGTAATAACCCGGCTGGGAGTCTaGATTTCGAAGATCCCCTCCTCAGCGTCCGCCTTA +
Preference number: 6 (lower is better)
Translates to: VAAFRVITRLGV*ISKIPSSASAL
Trigger: TAAGGCGGACGCTGAGGAGGGGATCTTCGAAATCAAGACTCCCAGCCGGGTTATTACCCTGAAGGCCGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CAA 90 bp ACCTTCTCAGAGAGCTTGCAGATGACCTGCTGCTTGGCGTGGTTCTaGTCCATAAGCAGCTGCACGTGCTGCTGTAGCTCCTGCACCTGC +
Preference number: 6 (lower is better)
Translates to: TFSESLQMTCCLAWF*SISSCTCCCSSCTC
Trigger: GCAGGTGCAGGAGCTACAGCAGCACGTGCAGCTGCTTATGGACAAGAACCACGCCAAGCAGCAGGTCATCTGCAAGCTCTCTGAGAAGGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS TCA 72 bp ATGCCGTCAGCGTGTTGCAGTAGTAATCAGCGGGCATaGTGGTCTCCACAATGGCCACCAGGCACCAGAAGG +
Preference number: 6 (lower is better)
Translates to: MPSACCSSNQRA*WSPQWPPGTRR
Trigger: CCTTCTGGTGCCTGGTGGCCATTGTGGAGACCATCATGCCCGCTGATTACTACTGCAACACGCTGACGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CCA 72 bp CGTCGTAGAAGAACCAGCGGGATTTCCAGCCCCGGATaGGCCCTTTGCCGCCGAACTTACTTAAATACCCAC +
Preference number: 6 (lower is better)
Translates to: RRRRTSGISSPG*ALCRRTYLNTH
Trigger: GTGGGTATTTAAGTAAGTTCGGCGGCAAAGGGCCCATCCGGGGCTGGAAATCCCGCTGGTTCTTCTACGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CCA 72 bp ACACTGCACTGGAGAGGTCGATGCTGTCCAAGGGATTaGCATCCTGAGCGGTCCGCGAGTAATACAGCTGAC +
Preference number: 6 (lower is better)
Translates to: TLHWRGRCCPRD*HPERSASNTAD
Trigger: GTCAGCTGTATTACTCGCGGACCGCTCAGGATGCCAATCCCTTGGACAGCATCGACCTCTCCAGTGCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CAA 72 bp GAGAGCTTGCAGATGACCTGCTGCTTGGCGTGGTTCTaGTCCATAAGCAGCTGCACGTGCTGCTGTAGCTCC +
Preference number: 6 (lower is better)
Translates to: ESLQMTCCLAWF*SISSCTCCCSS
Trigger: GGAGCTACAGCAGCACGTGCAGCTGCTTATGGACAAGAACCACGCCAAGCAGCAGGTCATCTGCAAGCTCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CAA 90 bp AAGTCCTGGGTGACCTTCTCAGAGAGCTTGCAGATGACCTGCTGCTaGGCGTGGTTCTTGTCCATAAGCAGCTGCACGTGCTGCTGTAGC +
Preference number: 6 (lower is better)
Translates to: KSWVTFSESLQMTCC*AWFLSISSCTCCCS
Trigger: GCTACAGCAGCACGTGCAGCTGCTTATGGACAAGAACCACGCCAAGCAGCAGGTCATCTGCAAGCTCTCTGAGAAGGTCACCCAGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CAA 90 bp AGGATGTTGCTAATGAGACTGTCCGCAAAGACCACGAGGAACCAGTaGAAGGTGACGAGGGAGAGATCCACGTGGTGCTGCCCCAGATGG +
Preference number: 6 (lower is better)
Translates to: RMLLMRLSAKTTRNQ*KVTRERSTWCCPRW
Trigger: CCATCTGGGGCAGCACCACGTGGATCTCTCCCTCGTCACCTTCAACTGGTTCCTCGTGGTCTTTGCGGACAGTCTCATTAGCAACATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CAA 72 bp TGGCCTGTTCCCTGGGCCTGCTTGTTGCCACGGATGTaGTGCATTGTGTTCTGTATTTCAGTCCCCAGGTGC +
Preference number: 6 (lower is better)
Translates to: WPVPWACLLPRM*CIVFCISVPRC
Trigger: GCACCTGGGGACTGAAATACAGAACACAATGCACAACATCCGTGGCAACAAGCAGGCCCAGGGAACAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CAA 72 bp CTAATGAGACTGTCCGCAAAGACCACGAGGAACCAGTaGAAGGTGACGAGGGAGAGATCCACGTGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: LMRLSAKTTRNQ*KVTRERSTWCC
Trigger: GCAGCACCACGTGGATCTCTCCCTCGTCACCTTCAACTGGTTCCTCGTGGTCTTTGCGGACAGTCTCATTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CAA 90 bp GGAGAATCTTCCCCTGGAGGTTCATGGCCTGTTCCCTGGGCCTGCTaGTTGCCACGGATGTTGTGCATTGTGTTCTGTATTTCAGTCCCC +
Preference number: 6 (lower is better)
Translates to: GESSPGGSWPVPWAC*LPRMLCIVFCISVP
Trigger: GGGGACTGAAATACAGAACACAATGCACAACATCCGTGGCAACAAGCAGGCCCAGGGAACAGGCCATGAACCTCCAGGGGAAGATTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CAA 90 bp ATGCGCAGCTGCCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCATaGAAGGCGATGTTCATCAGCTTCCGGCTGTTGGAGATGGTCTTG +
Preference number: 6 (lower is better)
Translates to: MRSCRSCFMRKGFMS*KAMFISFRLLEMVL
Trigger: CAAGACCATCTCCAACAGCCGGAAGCTGATGAACATCGCCTTCAATGACATGAACCCCTTCCGCATGAAACAGCTGCGGCAGCTGCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375066.6
ENST00000465784.7
CDS TCA 72 bp AGGTGTTGTTCTGGCGCTTGGCTTTCTGAGCGAAACTaGTGGTCAGAGAAGGCTTGGGTGCAGGCTTTGGAG +
Preference number: 6 (lower is better)
Translates to: RCCSGAWLSERN*WSEKAWVQALE
Trigger: CTCCAAAGCCTGCACCCAAGCCTTCTCTGACCATCAGTTTCGCTCAGAAAGCCAAGCGCCAGAACAACACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS TCA 72 bp GCCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCATTaGAGGCGATGTTCATCAGCTTCCGGCTGTTGGAGA +
Preference number: 6 (lower is better)
Translates to: AAAVSCGRGSCH*RRCSSASGCWR
Trigger: TCTCCAACAGCCGGAAGCTGATGAACATCGCCTTCAATGACATGAACCCCTTCCGCATGAAACAGCTGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375066.6
ENST00000465784.7
CDS TCA 72 bp GCCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCATTaGAGGCGATGTTCATCAGCGGCTGTTGGAGATGGT +
Preference number: 6 (lower is better)
Translates to: AAAVSCGRGSCH*RRCSSAAVGDG
Trigger: ACCATCTCCAACAGCCGCTGATGAACATCGCCTTCAATGACATGAACCCCTTCCGCATGAAACAGCTGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS GCA 72 bp AGAACCAGCGGGATTTCCAGCCCCGGATGGGCCCTTTaGCGCCGAACTTACTTAAATACCCACAGAGTTTCT +
Preference number: 6 (lower is better)
Translates to: RTSGISSPGWAL*RRTYLNTHRVS
Trigger: AGAAACTCTGTGGGTATTTAAGTAAGTTCGGCGGCAAAGGGCCCATCCGGGGCTGGAAATCCCGCTGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CCA 72 bp TTCTCAGAGAGCTTGCAGATGACCTGCTGCTTGGCGTaGTTCTTGTCCATAAGCAGCTGCACGTGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: FSESLQMTCCLA*FLSISSCTCCC
Trigger: ACAGCAGCACGTGCAGCTGCTTATGGACAAGAACCACGCCAAGCAGCAGGTCATCTGCAAGCTCTCTGAGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CCA 72 bp TTCTCAGCCACCTTTCTCCAGATCTTTGTGACCTGGTaGATCTCGGAGTTGAGGAAGCAGTTCTGGGTCCGG +
Preference number: 6 (lower is better)
Translates to: FSATFLQIFVTW*ISELRKQFWVR
Trigger: CCGGACCCAGAACTGCTTCCTCAACTCCGAGATCCACCAGGTCACAAAGATCTGGAGAAAGGTGGCTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CCA 72 bp ACCAGTAGGTCTGAATTTAAGTCCTGGCTGATGTTCTaGCTGGAAGGCCTCAGGCAGGCCACTGAACCACTC +
Preference number: 6 (lower is better)
Translates to: TSRSEFKSWLMF*LEGLRQATEPL
Trigger: GAGTGGTTCAGTGGCCTGCCTGAGGCCTTCCAGCCAGAACATCAGCCAGGACTTAAATTCAGACCTACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375063.5
CDS CAA 72 bp AAGAACCAGCGGGATTTCCAGCCCCGGATGGGCCCTTaGCCGCCGAACTTACTTAAATACCCACAGAGTTTC +
Preference number: 6 (lower is better)
Translates to: KNQRDFQPRMGP*PPNLLKYPQSF
Trigger: GAAACTCTGTGGGTATTTAAGTAAGTTCGGCGGCAAAGGGCCCATCCGGGGCTGGAAATCCCGCTGGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CAA 72 bp TTCTTGCCCTTCAGGGTAATAACCCGGCTGGGAGTCTaGATTTCGAAGATCCCCTCCTCAGCGTCCGCCTTA +
Preference number: 6 (lower is better)
Translates to: FLPFRVITRLGV*ISKIPSSASAL
Trigger: TAAGGCGGACGCTGAGGAGGGGATCTTCGAAATCAAGACTCCCAGCCGGGTTATTACCCTGAAGGGCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342112.9
CDS CAA 72 bp TCGTACAGGAAGGCATCCCAGACCCGAAGGAGGATGTaGCTAATGAGACTGTCCGCAAAGACCACGAGGAAC +
Preference number: 6 (lower is better)
Translates to: SYRKASQTRRRM*LMRLSAKTTRN
Trigger: GTTCCTCGTGGTCTTTGCGGACAGTCTCATTAGCAACATCCTCCTTCGGGTCTGGGATGCCTTCCTGTACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS CAA 72 bp TGCCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCATaGAAGGCGATGTTCATCAGCTTCCGGCTGTTGGAG +
Preference number: 6 (lower is better)
Translates to: CRSCFMRKGFMS*KAMFISFRLLE
Trigger: CTCCAACAGCCGGAAGCTGATGAACATCGCCTTCAATGACATGAACCCCTTCCGCATGAAACAGCTGCGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375066.6
ENST00000465784.7
CDS CAA 72 bp TGCCGCAGCTGTTTCATGCGGAAGGGGTTCATGTCATaGAAGGCGATGTTCATCAGCGGCTGTTGGAGATGG +
Preference number: 6 (lower is better)
Translates to: CRSCFMRKGFMS*KAMFISGCWRW
Trigger: CCATCTCCAACAGCCGCTGATGAACATCGCCTTCAATGACATGAACCCCTTCCGCATGAAACAGCTGCGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS TCA 72 bp GCGATGTTCATCAGCGGCTGTTGGAGATGGTCTTGGTaGAGAAGCGCAGGTACTGGTAGATTTCCAGGCCAT +
Preference number: 6 (lower is better)
Translates to: AMFISGCWRWSW*RSAGTGRFPGH
Trigger: ATGGCCTGGAAATCTACCAGTACCTGCGCTTCTTCACCAAGACCATCTCCAACAGCCGCTGATGAACATCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375064.5
CDS TCA 72 bp AAGAATGGGAAGGTGTTGTTCTGGCGCTTGGCTTTCTaGGCGAAACTGATGGTCAGAGAAGGCTTGGGTGCA +
Preference number: 6 (lower is better)
Translates to: KNGKVLFWRLAF*AKLMVREGLGA
Trigger: TGCACCCAAGCCTTCTCTGACCATCAGTTTCGCTCAGAAAGCCAAGCGCCAGAACAACACCTTCCCATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
CDS TCA 72 bp TGTTCATCAGCTTCCGGCTGTTGGAGATGGTCTTGGTaGAGAAGCGCAGGTACTGGTAGATTTCCAGGCCAT +
Preference number: 6 (lower is better)
Translates to: CSSASGCWRWSW*RSAGTGRFPGH
Trigger: ATGGCCTGGAAATCTACCAGTACCTGCGCTTCTTCACCAAGACCATCTCCAACAGCCGGAAGCTGATGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342112.9
ENST00000375063.5
ENST00000375066.6
ENST00000465784.7
CDS CCA 72 bp ATCAGAACCTGTTGCTCCAAGGCTGCCACTTTCTCCTaGGCAGTTCGGTTCCGTGTGATTCCTTCAGAAAAG +
Preference number: 6 (lower is better)
Translates to: IRTCCSKAATFS*AVRFRVIPSEK
Trigger: CTTTTCTGAAGGAATCACACGGAACCGAACTGCCCAGGAGAAAGTGGCAGCCTTGGAGCAACAGGTTCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS TCA 72 bp AGGCTGCCACTTTCTCCTGGGCAGTTCGGTTCCGTGTaGTTCCTTCAGAAAAGAATGGGAAGGTGTTGTTCT +
Preference number: 6 (lower is better)
Translates to: RLPLSPGQFGSV*FLQKRMGRCCS
Trigger: AGAACAACACCTTCCCATTCTTTTCTGAAGGAATCACACGGAACCGAACTGCCCAGGAGAAAGTGGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342112.9
ENST00000375064.5
ENST00000375066.6
ENST00000465784.7
ENST00000493589.2
CDS CAA 90 bp AAGCTTCCATGTCATCCTGGAGAAGAGAGTAAAATATGTTATCAGTaGGACATAAACATCTCCCTGGTCCTGGGGAGTCACACCCTCAAA +
Preference number: 6 (lower is better)
Translates to: KLPCHPGEESKICYQ*DINISLVLGSHTLK
Trigger: TTTGAGGGTGTGACTCCCCAGGACCAGGGAGATGTTTATGTCCAACTGATAACATATTTTACTCTCTTCTCCAGGATGACATGGAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375063.5