Pregenerated sensors for TATDN1 (Homo sapiens)
Ensembl gene IDs: ENSG00000147687Ensembl transcript IDs: ENST00000518133.5, ENST00000518485.5, ENST00000521546.5, ENST00000523152.3, ENST00000523214.5, ENST00000523888.5
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GTTTCTTTGACTGCAGAGATGTATGACTGTCACAGAATAAACCGTTCGTCCATAGAAGCGACTCATGACTaGGCATGGAGGACCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: VSLTAEMYDCHRINRSSIEATHD*AWRTSP Trigger: TGGGGAGGTCCTCCATGCGCAGTCATGAGTCGCTTC...TATGGACGAACGGTTTATTCTGTGACAGTCATACATCTCTGCAGTCAAAGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523214.5 |
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| CDS-3UTR TCA 90 bp | GTTTCTTTGACTGCAGAGATGTATGACTGTCACAGAATAAACCGTTCGTCCATACTTGGTACCATCAAATaGATGCACCACTCCCCCTAC | + |
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Preference number: 4 (lower is better) Translates to: VSLTAEMYDCHRINRSSILGTIK*MHHSPY Trigger: GTAGGGGGAGTGGTGCATTCATTTGATGGTACCAAG...TATGGACGAACGGTTTATTCTGTGACAGTCATACATCTCTGCAGTCAAAGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523214.5 |
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| CDS-3UTR GCA 90 bp | GTTTCTTTGACTGCAGAGATGTATGACTGTCACAGAATAAACCGTTCGTCCATAGTACCATCAAATGAATaGACCACTCCCCCTACACAC | + |
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Preference number: 4 (lower is better) Translates to: VSLTAEMYDCHRINRSSIVPSNE*TTPPTH Trigger: GTGTGTAGGGGGAGTGGTGCATTCATTTGATGGTAC...TATGGACGAACGGTTTATTCTGTGACAGTCATACATCTCTGCAGTCAAAGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523214.5 |
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| CDS-3UTR TCA 90 bp | GTTTCTTTGACTGCAGAGATGTATGACTGTCACAGAATAAACCGTTCGTCCATAGACTGCAGAGATGTATaGCTGTCACAGAATAAACCG | + |
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Preference number: 4 (lower is better) Translates to: VSLTAEMYDCHRINRSSIDCRDV*LSQNKP Trigger: CGGTTTATTCTGTGACAGTCATACATCTCTGCAGTC...TATGGACGAACGGTTTATTCTGTGACAGTCATACATCTCTGCAGTCAAAGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523214.5 |
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| CDS CCA 90 bp | CCCAGCGGAAGCGGAAGTGGCCGCCGGCAACTCCGCCCTTCCGGCTaGCCCCGCTCAGTCACCCGCAGCAGGCGTGCAGTTTCCCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: PSGSGSGRRQLRPSG*PRSVTRSRRAVSRL Trigger: GAGCCGGGAAACTGCACGCCTGCTGCGGGTGACTGAGCGGGGCCAGCCGGAAGGGCGGAGTTGCCGGCGGCCACTTCCGCTTCCGCTGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523152.3 |
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| CDS GCA 90 bp | CAAAACGTTAGCTGCCGAGAATTTCTCTCTTTAGAGTGGCAGTGTTaGTGTCTCTGCACTAGCATTAGTGCAGAAGCTCCAGGAAGGGGT | + |
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Preference number: 5 (lower is better) Translates to: QNVSCREFLSLEWQC*CLCTSISAEAPGRG Trigger: ACCCCTTCCTGGAGCTTCTGCACTAATGCTAGTGCAGAGACAGCAACACTGCCACTCTAAAGAGAGAAATTCTCGGCAGCTAACGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518485.5 |
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| CDS CCA 90 bp | GACATGATGCAAAACGTTAGCTGCCGAGAATTTCTCTCTTTAGAGTaGCAGTGTTGCTGTCTCTGCACTAGCATTAGTGCAGAAGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: DMMQNVSCREFLSLE*QCCCLCTSISAEAP Trigger: TGGAGCTTCTGCACTAATGCTAGTGCAGAGACAGCAACACTGCCACTCTAAAGAGAGAAATTCTCGGCAGCTAACGTTTTGCATCATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518485.5 |
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| CDS GCA 90 bp | TTACAACCTGTCATCATCTCCAGTGACATGATGCAAAACGTTAGCTaGCGAGAATTTCTCTCTTTAGAGTGGCAGTGTTGCTGTCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: LQPVIISSDMMQNVS*REFLSLEWQCCCLC Trigger: GCAGAGACAGCAACACTGCCACTCTAAAGAGAGAAATTCTCGGCAGCTAACGTTTTGCATCATGTCACTGGAGATGATGACAGGTTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518485.5 |
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| CDS TCA 90 bp | AGAGGCTTCCAGAAAGAAGTCATCATTGAACTGAATCTTAAAGGATaGGTGACTGTTATCCAGTGGAAGAGAGGTAACTGCACAAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: RGFQKEVIIELNLKG*VTVIQWKRGNCTKR Trigger: CCTCTTTGTGCAGTTACCTCTCTTCCACTGGATAACAGTCACTCATCCTTTAAGATTCAGTTCAATGATGACTTCTTTCTGGAAGCCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518133.5 |
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| CDS CCA 72 bp | AGCGGAAGTGGCCGCCGGCAACTCCGCCCTTCCGGCTaGCCCCGCTCAGTCACCCGCAGCAGGCGTGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: SGSGRRQLRPSG*PRSVTRSRRAV Trigger: AACTGCACGCCTGCTGCGGGTGACTGAGCGGGGCCAGCCGGAAGGGCGGAGTTGCCGGCGGCCACTTCCGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523152.3 |
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| CDS CCA 72 bp | GCCACCTCGAGTCGTGGTGCGTCCAGAGGTAAGGGATaGGGACCCAGGACTCGGGGAGGTGACCCTCGGGGC | + |
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Preference number: 6 (lower is better) Translates to: ATSSRGASRGKG*GPRTRGGDPRG Trigger: GCCCCGAGGGTCACCTCCCCGAGTCCTGGGTCCCCATCCCTTACCTCTGGACGCACCACGACTCGAGGTGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523152.3 |
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| CDS CCA 72 bp | TGGAGGTTCAAGGACTTCGGGAACGGAATTGGAAGGTaGCCTCTCGCTTCACAGAATCCTATGGTAGACCCG | + |
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Preference number: 6 (lower is better) Translates to: WRFKDFGNGIGR*PLASQNPMVDP Trigger: CGGGTCTACCATAGGATTCTGTGAAGCGAGAGGCCACCTTCCAATTCCGTTCCCGAAGTCCTTGAACCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523152.3 |
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| CDS GCA 72 bp | CTTCAGGTAGCTGGAAACCCCACAAAACGAGGATCATaGCCATTTAAATCCCGCAGCATTCTCCCTCTCGTT | + |
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Preference number: 6 (lower is better) Translates to: LQVAGNPTKRGS*PFKSRSILPLV Trigger: AACGAGAGGGAGAATGCTGCGGGATTTAAATGGGCATGATCCTCGTTTTGTGGGGTTTCCAGCTACCTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521546.5 |
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| CDS GCA 72 bp | GAATTTCTCTCTTTAGAGTGGCAGTGTTGCTGTCTCTaGACTAGCATTAGTGCAGAAGCTCCAGGAAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: EFLSLEWQCCCL*TSISAEAPGRG Trigger: ACCCCTTCCTGGAGCTTCTGCACTAATGCTAGTGCAGAGACAGCAACACTGCCACTCTAAAGAGAGAAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518485.5 |
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| CDS GCA 72 bp | AGCTGCCGAGAATTTCTCTCTTTAGAGTGGCAGTGTTaGTGTCTCTGCACTAGCATTAGTGCAGAAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SCREFLSLEWQC*CLCTSISAEAP Trigger: TGGAGCTTCTGCACTAATGCTAGTGCAGAGACAGCAACACTGCCACTCTAAAGAGAGAAATTCTCGGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518485.5 |
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| CDS GCA 72 bp | GTCATCATCTCCAGTGACATGATGCAAAACGTTAGCTaGCGAGAATTTCTCTCTTTAGAGTGGCAGTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: VIISSDMMQNVS*REFLSLEWQCC Trigger: GCAACACTGCCACTCTAAAGAGAGAAATTCTCGGCAGCTAACGTTTTGCATCATGTCACTGGAGATGATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518485.5 |
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| CDS CCA 72 bp | CAAAACGTTAGCTGCCGAGAATTTCTCTCTTTAGAGTaGCAGTGTTGCTGTCTCTGCACTAGCATTAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: QNVSCREFLSLE*QCCCLCTSISA Trigger: TGCACTAATGCTAGTGCAGAGACAGCAACACTGCCACTCTAAAGAGAGAAATTCTCGGCAGCTAACGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518485.5 |
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| CDS CAA 90 bp | GAAAACGGCACTGTTTGTAACCAGGAGAAAACCACAACTCTTAAGTaGAAGCCTCAGTTATTGGGCTCACTGAATCGTGTCACATCACTG | + |
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Preference number: 6 (lower is better) Translates to: ENGTVCNQEKTTTLK*KPQLLGSLNRVTSL Trigger: CAGTGATGTGACACGATTCAGTGAGCCCAATAACTGAGGCTTCAACTTAAGAGTTGTGGTTTTCTCCTGGTTACAAACAGTGCCGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523888.5 |
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| CDS CAA 90 bp | TGTAACCAGGAGAAAACCACAACTCTTAAGTTGAAGCCTCAGTTATaGGGCTCACTGAATCGTGTCACATCACTGTCACCTATGATCGAT | + |
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Preference number: 6 (lower is better) Translates to: CNQEKTTTLKLKPQL*GSLNRVTSLSPMID Trigger: ATCGATCATAGGTGACAGTGATGTGACACGATTCAGTGAGCCCAATAACTGAGGCTTCAACTTAAGAGTTGTGGTTTTCTCCTGGTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523888.5 |
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| CDS CAA 72 bp | ACTGTTTGTAACCAGGAGAAAACCACAACTCTTAAGTaGAAGCCTCAGTTATTGGGCTCACTGAATCGTGTC | + |
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Preference number: 6 (lower is better) Translates to: TVCNQEKTTTLK*KPQLLGSLNRV Trigger: GACACGATTCAGTGAGCCCAATAACTGAGGCTTCAACTTAAGAGTTGTGGTTTTCTCCTGGTTACAAACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523888.5 |
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| CDS TCA 72 bp | TTTCACAATTACAACCTGTCATCATCTCCAGTGACATaGTGCAAAACGTTAGCTGCCGAGAATTTCTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: FHNYNLSSSPVT*CKTLAAENFSL Trigger: AAGAGAGAAATTCTCGGCAGCTAACGTTTTGCATCATGTCACTGGAGATGATGACAGGTTGTAATTGTGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518485.5 |
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