Pregenerated sensors for TARBP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000059588Ensembl transcript IDs: ENST00000040877.2, ENST00000462259.5, ENST00000463793.1, ENST00000468077.5, ENST00000471918.1, ENST00000481183.1, ENST00000483404.5, ENST00000484454.1, ENST00000496673.5
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGCCACCTCGCGCGCCGCCTCCGGGAGCGCGCCTGCGCCCCCGCTaGCGCGCGCCTCCTCGTCCTCGAGCCGCTGCAGAAGGAAGCGCA | + |
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Preference number: 5 (lower is better) Translates to: QPPRAPPPGARLRPR*RAPPRPRAAAEGSA Trigger: TGCGCTTCCTTCTGCAGCGGCTCGAGGACGAGGAGGCGCGCGGCAGCGGGGGCGCAGGCGCGCTCCCGGAGGCGGCGCGCGAGGTGGCTG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS CCA 90 bp | GCCCCACACGGCCCGCAGCGCCGCCCCGCCACATTGGACCAGCACTaGCAGCAGTCGCCCGGCCACCAGCGCCGCCGCGTCCTCGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: APHGPQRRPATLDQH*QQSPGHQRRRVLGR Trigger: CCTGCCGAGGACGCGGCGGCGCTGGTGGCCGGGCGACTGCTGCCAGTGCTGGTCCAATGTGGCGGGGCGGCGCTGCGGGCCGTGTGGGGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS GCA 90 bp | CCGCCGACACCTCCACCGCCCTCTGCAGCAGGTAGCGCGCTCGCTTaGGCGTCAGGGCGTCCGCCTGGCCCAGCCCCGCCTGCACCGTCC | + |
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Preference number: 5 (lower is better) Translates to: PPTPPPPSAAGSALA*ASGRPPGPAPPAPS Trigger: GGACGGTGCAGGCGGGGCTGGGCCAGGCGGACGCCCTGACGCGCAAGCGAGCGCGCTACCTGCTGCAGAGGGCGGTGGAGGTGTCGGCGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS CCA 90 bp | GCCTGCTTCTGCACCGTGACAGGTGCGGGGAAAGAGAGGCAGACATaGGAACCACCGTGGGGGCTTCACAGACACTGGGTCCTGCACCGC | + |
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Preference number: 5 (lower is better) Translates to: ACFCTVTGAGKERQT*EPPWGLHRHWVLHR Trigger: GCGGTGCAGGACCCAGTGTCTGTGAAGCCCCCACGGTGGTTCCCATGTCTGCCTCTCTTTCCCCGCACCTGTCACGGTGCAGAAGCAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000468077.5 |
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| CDS GCA 90 bp | GGCAGACATGGGAACCACCGTGGGGGCTTCACAGACACTGGGTCCTaGACCGCTCCCTCACCCCATCCACGTCACTTGCTTGATACTGAG | + |
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Preference number: 5 (lower is better) Translates to: GRHGNHRGGFTDTGS*TAPSPHPRHLLDTE Trigger: CTCAGTATCAAGCAAGTGACGTGGATGGGGTGAGGGAGCGGTGCAGGACCCAGTGTCTGTGAAGCCCCCACGGTGGTTCCCATGTCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000468077.5 |
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| CDS TCA 90 bp | GCATTCCTGGAGATGCTTATGACACTGCAGCCTGCTTCTGCACCGTaGCAGGTGCGGGGAAAGAGAGGCAGACATGGGAACCACCGTGGG | + |
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Preference number: 5 (lower is better) Translates to: AFLEMLMTLQPASAP*QVRGKRGRHGNHRG Trigger: CCCACGGTGGTTCCCATGTCTGCCTCTCTTTCCCCGCACCTGTCACGGTGCAGAAGCAGGCTGCAGTGTCATAAGCATCTCCAGGAATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468077.5 |
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| CDS GCA 90 bp | AGGAAGGCACATCATGGCTTGGTATCTCCGTGCGAGAGCAGCTGCTaGCTGGTGTACTCCCAGATCAGCAGGGCTCCACTCACATGGACA | + |
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Preference number: 5 (lower is better) Translates to: RKAHHGLVSPCESSC*LVYSQISRAPLTWT Trigger: TGTCCATGTGAGTGGAGCCCTGCTGATCTGGGAGTACACCAGGCAGCAGCTGCTCTCGCACGGAGATACCAAGCCATGATGTGCCTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000483404.5 ENST00000496673.5 |
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| CDS GCA 90 bp | CTAAGGAAGGCACATCATGGCTTGGTATCTCCGTGCGAGAGCAGCTaGTGCCTGGTGTACTCCCAGATCAGCAGGGCTCCACTCACATGG | + |
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Preference number: 5 (lower is better) Translates to: LRKAHHGLVSPCESS*CLVYSQISRAPLTW Trigger: CCATGTGAGTGGAGCCCTGCTGATCTGGGAGTACACCAGGCAGCAGCTGCTCTCGCACGGAGATACCAAGCCATGATGTGCCTTCCTTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000483404.5 ENST00000496673.5 |
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| CDS TCA 90 bp | CATAACTGCTCTGCTCCTCTGCGTGGGGCTTCTGCAGCGTCTGATTaGGCTGAAGAGAGGAAAGGAAGCTTTCCAGGGGCCCAGCATGGA | + |
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Preference number: 5 (lower is better) Translates to: HNCSAPLRGASAASD*AEERKGSFPGAQHG Trigger: TCCATGCTGGGCCCCTGGAAAGCTTCCTTTCCTCTCTTCAGCTCAATCAGACGCTGCAGAAGCCCCACGCAGAGGAGCAGAGCAGTTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS GCA 90 bp | AGCAGCAGTTCACTAAGGAAGGCACATCATGGCTTGGTATCTCCGTaGGAGAGCAGCTGCTGCCTGGTGTACTCCCAGATCAGCAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: SSSSLRKAHHGLVSP*ESSCCLVYSQISRA Trigger: AGCCCTGCTGATCTGGGAGTACACCAGGCAGCAGCTGCTCTCGCACGGAGATACCAAGCCATGATGTGCCTTCCTTAGTGAACTGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000483404.5 ENST00000496673.5 |
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| CDS CCA 90 bp | AGGCACATCATGGCTTGGTATCTCCGTGCGAGAGCAGCTGCTGCCTaGTGTACTCCCAGATCAGCAGGGCTCCACTCACATGGACATTCA | + |
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Preference number: 5 (lower is better) Translates to: RHIMAWYLRARAAAA*CTPRSAGLHSHGHS Trigger: TGAATGTCCATGTGAGTGGAGCCCTGCTGATCTGGGAGTACACCAGGCAGCAGCTGCTCTCGCACGGAGATACCAAGCCATGATGTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000483404.5 ENST00000496673.5 |
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| CDS GCA 90 bp | AACACTGCTGCACTCCAAGGGGTGAGCATAACTGCTCTGCTCCTCTaGGTGGGGCTTCTGCAGCGTCTGATTGAGCTGAAGAGAGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: NTAALQGVSITALLL*VGLLQRLIELKRGK Trigger: CTTTCCTCTCTTCAGCTCAATCAGACGCTGCAGAAGCCCCACGCAGAGGAGCAGAGCAGTTATGCTCACCCCTTGGAGTGCAGCAGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS GCA 90 bp | GATGCTCCTACCAAATGCACTTCTCCCCTAAGGCTCACATGGAAATaGTTACCGGCTGCGCCTGGCAGCCCAGTTTCTACTGACCAATTC | + |
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Preference number: 5 (lower is better) Translates to: DAPTKCTSPLRLTWK*LPAAPGSPVSTDQF Trigger: GAATTGGTCAGTAGAAACTGGGCTGCCAGGCGCAGCCGGTAAGCATTTCCATGTGAGCCTTAGGGGAGAAGTGCATTTGGTAGGAGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS TCA 90 bp | GGTCGGTTTGTCGATGAGCGAGGCCACAACGATGAGTCTACTAATTaGCTTTCCAAGTCTGGCAGCACGATCCTGAAACAGGAGCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: GRFVDERGHNDESTN*LSKSGSTILKQELQ Trigger: CTGGAGCTCCTGTTTCAGGATCGTGCTGCCAGACTTGGAAAGTCAATTAGTAGACTCATCGTTGTGGCCTCGCTCATCGACAAACCGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000483404.5 ENST00000496673.5 |
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| CDS TCA 90 bp | ATCCCATATGGAAGGAAGTCACTTGTGCAGCCCACACTGAAGGAGTaGGAAGTCACGCTCCCCCTCCCTCAGGGCAGAGCTTCTATAAAA | + |
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Preference number: 5 (lower is better) Translates to: IPYGRKSLVQPTLKE*EVTLPLPQGRASIK Trigger: TTTTATAGAAGCTCTGCCCTGAGGGAGGGGGAGCGTGACTTCTCACTCCTTCAGTGTGGGCTGCACAAGTGACTTCCTTCCATATGGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS CCA 90 bp | AAAAAGTCTGAACAGCAGCAGCAGTTCACTAAGGAAGGCACATCATaGCTTGGTATCTCCGTGCGAGAGCAGCTGCTGCCTGGTGTACTC | + |
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Preference number: 5 (lower is better) Translates to: KKSEQQQQFTKEGTS*LGISVREQLLPGVL Trigger: GAGTACACCAGGCAGCAGCTGCTCTCGCACGGAGATACCAAGCCATGATGTGCCTTCCTTAGTGAACTGCTGCTGCTGTTCAGACTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000483404.5 ENST00000496673.5 |
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| CDS CCA 90 bp | TATTTTGATGCTCCTACCAAATGCACTTCTCCCCTAAGGCTCACATaGAAATGCTTACCGGCTGCGCCTGGCAGCCCAGTTTCTACTGAC | + |
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Preference number: 5 (lower is better) Translates to: YFDAPTKCTSPLRLT*KCLPAAPGSPVSTD Trigger: GTCAGTAGAAACTGGGCTGCCAGGCGCAGCCGGTAAGCATTTCCATGTGAGCCTTAGGGGAGAAGTGCATTTGGTAGGAGCATCAAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS TCA 90 bp | ACTGTGAGGGCTTCTAGTGCAGACTGCAAAGTCCTTATTGGCATCTaGACGGCAGGTAGAAACGGTTCCAGAATTTCACTCCCTGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: TVRASSADCKVLIGI*TAGRNGSRISLPVV Trigger: AACCACAGGGAGTGAAATTCTGGAACCGTTTCTACCTGCCGTTCAGATGCCAATAAGGACTTTGCAGTCTGCACTAGAAGCCCTCACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS TCA 90 bp | TGCCAATTCTTCTTGGCATTCCCTGCTCCGTGCATGCTTTCCACTTaGTGGAGGCTGGATTCAATCACAGGAGTCAGGGCATCAAATTCT | + |
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Preference number: 5 (lower is better) Translates to: CQFFLAFPAPCMLST*WRLDSITGVRASNS Trigger: AGAATTTGATGCCCTGACTCCTGTGATTGAATCCAGCCTCCATCAAGTGGAAAGCATGCACGGAGCAGGGAATGCCAAGAAGAATTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000481183.1 ENST00000483404.5 |
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| CDS TCA 90 bp | ACGATGAGTCTACTAATTGACTTTCCAAGTCTGGCAGCACGATCCTaGAACAGGAGCTCCAGGTCTAAGTCGGAAACACGACTGTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: TMSLLIDFPSLAARS*NRSSRSKSETRLFH Trigger: GTGGAACAGTCGTGTTTCCGACTTAGACCTGGAGCTCCTGTTTCAGGATCGTGCTGCCAGACTTGGAAAGTCAATTAGTAGACTCATCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000483404.5 ENST00000496673.5 |
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| CDS TCA 90 bp | AGGGCTCCACTCACATGGACATTCAGGGAGCGGATAATGCCCTGTTaGGGAATTTCCACACAAACGTCCAACTGTTGGATCAGATTTGCT | + |
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Preference number: 5 (lower is better) Translates to: RAPLTWTFRERIMPC*GISTQTSNCWIRFA Trigger: AGCAAATCTGATCCAACAGTTGGACGTTTGTGTGGAAATTCCTCAACAGGGCATTATCCGCTCCCTGAATGTCCATGTGAGTGGAGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000471918.1 ENST00000483404.5 ENST00000496673.5 |
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| CDS TCA 90 bp | CAAGATACCACACAAAGTGCTGTCCTCCTCCTCACTACTGATTTCTaGGCTACTCTGTCTTCCCTAATGGTGATCCTGGACCCACACAGT | + |
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Preference number: 5 (lower is better) Translates to: QDTTQSAVLLLTTDF*ATLSSLMVILDPHS Trigger: ACTGTGTGGGTCCAGGATCACCATTAGGGAAGACAGAGTAGCTCAGAAATCAGTAGTGAGGAGGAGGACAGCACTTTGTGTGGTATCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS TCA 90 bp | AAACTGTTTGTCGCTGATACACTGAAGGCTGCCAACAACGAGCACTaGAGCCCCAAATACCTCACAGGTCCTCCTAAATTGGTCGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: KLFVADTLKAANNEH*SPKYLTGPPKLVGL Trigger: CAAACCGACCAATTTAGGAGGACCTGTGAGGTATTTGGGGCTTCAGTGCTCGTTGTTGGCAGCCTTCAGTGTATCAGCGACAAACAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS CCA 90 bp | CTTCTTCCACTGGCTTTGCTACCAGGGCCTCTCATTCTTCCCTCCTaGTCAAATGCGGTGCACAGGCATTTGCAATTTACTCAAGGAAAA | + |
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Preference number: 5 (lower is better) Translates to: LLPLALLPGPLILPS*SNAVHRHLQFTQGK Trigger: TTTTCCTTGAGTAAATTGCAAATGCCTGTGCACCGCATTTGACCAGGAGGGAAGAATGAGAGGCCCTGGTAGCAAAGCCAGTGGAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000462259.5 ENST00000483404.5 |
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| CDS TCA 90 bp | AGGTCTAAGTCGGAAACACGACTGTTCCACGGGATAATCTTCTTCTaGACGTCGGTCCACTCCGCTTGGTTATCTGCTTCGACCAAATTA | + |
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Preference number: 5 (lower is better) Translates to: RSKSETRLFHGIIFF*TSVHSAWLSASTKL Trigger: TAATTTGGTCGAAGCAGATAACCAAGCGGAGTGGACCGACGTTCAGAAGAAGATTATCCCGTGGAACAGTCGTGTTTCCGACTTAGACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000483404.5 ENST00000496673.5 |
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| CDS GCA 90 bp | GGCCTCTCATTCTTCCCTCCTGGTCAAATGCGGTGCACAGGCATTTaGAATTTACTCAAGGAAAAACACATTCTCCCAGCTCTAGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: GLSFFPPGQMRCTGI*NLLKEKHILPALVF Trigger: GAAAACTAGAGCTGGGAGAATGTGTTTTTCCTTGAGTAAATTGCAAATGCCTGTGCACCGCATTTGACCAGGAGGGAAGAATGAGAGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000462259.5 ENST00000483404.5 |
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| CDS CCA 90 bp | TTGAGGAATTTCCACACAAACGTCCAACTGTTGGATCAGATTTGCTaGAATTCCCTCACGTTCATTTCCCAACAAGAGCAGAGATTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LRNFHTNVQLLDQIC*NSLTFISQQEQRFL Trigger: GAGAAATCTCTGCTCTTGTTGGGAAATGAACGTGAGGGAATTCCAGCAAATCTGATCCAACAGTTGGACGTTTGTGTGGAAATTCCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000471918.1 ENST00000483404.5 ENST00000496673.5 |
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| CDS TCA 90 bp | TCAAGCAATGGAACACTGGTAAAACTTGATCAGAAGAAAGAACTGTaGGGGCTTCTAGTGCAGACTGCAAAGTCCTTATTGGCATCTGAA | + |
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Preference number: 5 (lower is better) Translates to: SSNGTLVKLDQKKEL*GLLVQTAKSLLASE Trigger: TTCAGATGCCAATAAGGACTTTGCAGTCTGCACTAGAAGCCCTCACAGTTCTTTCTTCTGATCAAGTTTTACCAGTGTTCCATTGCTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS CCA 90 bp | ACTTTCTGCCCTAGTTTTAGAATCAGCTATTTCTCCAGCGATCCCTaGTTCGTTTTATTGGAGAATGGTGTTAGCAACCAAGATCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: TFCPSFRISYFSSDP*FVLLENGVSNQDLG Trigger: TCCAAGATCTTGGTTGCTAACACCATTCTCCAATAAAACGAACCAGGGATCGCTGGAGAAATAGCTGATTCTAAAACTAGGGCAGAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS TCA 90 bp | AGAAGATATAATTTTCCACGCCATGTCAAAAGACTCTATGCAGAGTaGTTCAGAGGAAGTCAGAAGCTTGGGAACCAACACTTTCAAGCA | + |
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Preference number: 5 (lower is better) Translates to: RRYNFPRHVKRLYAE*FRGSQKLGNQHFQA Trigger: TGCTTGAAAGTGTTGGTTCCCAAGCTTCTGACTTCCTCTGAATCACTCTGCATAGAGTCTTTTGACATGGCGTGGAAAATTATATCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS TCA 90 bp | TCAAGCAATCCCTTGCTTTCTAAAATCACATGGTTCAACAGACACTaGAGGTCAAAGGAAGTGACATATACTAATGAAGGAACCAGACGG | + |
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Preference number: 5 (lower is better) Translates to: SSNPLLSKITWFNRH*RSKEVTYTNEGTRR Trigger: CCGTCTGGTTCCTTCATTAGTATATGTCACTTCCTTTGACCTTCAGTGTCTGTTGAACCATGTGATTTTAGAAAGCAAGGGATTGCTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS TCA 90 bp | CAAAGGTCAGTGACTGTACTGCCAACATTACAAGGTGTGATGTTATaGTATACACTGGTTTTTGTCCACAATTCCTGTCTTATAACTCCC | + |
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Preference number: 5 (lower is better) Translates to: QRSVTVLPTLQGVML*YTLVFVHNSCLITP Trigger: GGGAGTTATAAGACAGGAATTGTGGACAAAAACCAGTGTATATCATAACATCACACCTTGTAATGTTGGCAGTACAGTCACTGACCTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS GCA 90 bp | TTTGCCAAAGCCTTAGATAGAAACAAAATGGGAACAGCACACCAATaGCTACTTGTCATCTTCCGAATAAACTTCAATAGGAAGCTACTC | + |
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Preference number: 5 (lower is better) Translates to: FAKALDRNKMGTAHQ*LLVIFRINFNRKLL Trigger: GAGTAGCTTCCTATTGAAGTTTATTCGGAAGATGACAAGTAGGCATTGGTGTGCTGTTCCCATTTTGTTTCTATCTAAGGCTTTGGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS GCA 90 bp | ATAACTCTCCAGATAGGGTTACCCCTTTTCCACCCAACCTTCAAATaGAGATTTATAAGCTCAGTTAACACCATCAGGTATAAATGGCAA | + |
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Preference number: 5 (lower is better) Translates to: ITLQIGLPLFHPTFK*RFISSVNTIRYKWQ Trigger: TTGCCATTTATACCTGATGGTGTTAACTGAGCTTATAAATCTGCATTTGAAGGTTGGGTGGAAAAGGGGTAACCCTATCTGGAGAGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS TCA 90 bp | TTTCTAAAATCACATGGTTCAACAGACACTGAAGGTCAAAGGAAGTaGCATATACTAATGAAGGAACCAGACGGACCCAAACTTTTAATG | + |
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Preference number: 5 (lower is better) Translates to: FLKSHGSTDTEGQRK*HILMKEPDGPKLLM Trigger: CATTAAAAGTTTGGGTCCGTCTGGTTCCTTCATTAGTATATGTCACTTCCTTTGACCTTCAGTGTCTGTTGAACCATGTGATTTTAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS TCA 90 bp | AATATTGGGTTAGGTCTAAACTTTTGGCAGTTTGTTCCACTCCAATaGTGGTATAACCTTCTGTTTTCTTCTGCTGCAGATAATCAATTA | + |
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Preference number: 5 (lower is better) Translates to: NIGLGLNFWQFVPLQ*WYNLLFSSAADNQL Trigger: TAATTGATTATCTGCAGCAGAAGAAAACAGAAGGTTATACCATCATTGGAGTGGAACAAACTGCCAAAAGTTTAGACCTAACCCAATATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000471918.1 ENST00000483404.5 ENST00000496673.5 |
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| CDS CCA 90 bp | TCTTTATCTAATAGCTTGATTGCAAGATCCTCAATAAACAACTTGTaGGACATATTGGAGCCATCTAATAAACACAGGAATTTGACAGCA | + |
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Preference number: 5 (lower is better) Translates to: SLSNSLIARSSINNL*DILEPSNKHRNLTA Trigger: TGCTGTCAAATTCCTGTGTTTATTAGATGGCTCCAATATGTCCCACAAGTTGTTTATTGAGGATCTTGCAATCAAGCTATTAGATAAAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS CCA 90 bp | GTTAGTCAAAGTTATACCACACTTTTTCACTGTCTTTTCCCTAAGTaGAAAGGCAGAGGTCACCATGTCAATGAAAGTGATATTATTATT | + |
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Preference number: 5 (lower is better) Translates to: VSQSYTTLFHCLFPK*KGRGHHVNESDIII Trigger: AATAATAATATCACTTTCATTGACATGGTGACCTCTGCCTTTCCACTTAGGGAAAAGACAGTGAAAAAGTGTGGTATAACTTTGACTAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484454.1 |
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| CDS CCA 72 bp | CCGCCCCACACGGCCCGCAGCGCCGCCCCGCCACATTaGACCAGCACTGGCAGCAGTCGCCCGGCCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: PPHTARSAAPPH*TSTGSSRPATS Trigger: GCTGGTGGCCGGGCGACTGCTGCCAGTGCTGGTCCAATGTGGCGGGGCGGCGCTGCGGGCCGTGTGGGGCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS CAA 90 bp | GTCCCGGCTCTGCGAGAGCAGCGCTTCCGCGAGCACCCACTCCATTaGCCGAGCGCCCGCGCCACCGGCCCGGGCTCCCAAAGGAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: VPALREQRFREHPLH*PSARATGPGSQRKA Trigger: CGCCTTCCTTTGGGAGCCCGGGCCGGTGGCGCGGGCGCTCGGCAAATGGAGTGGGTGCTCGCGGAAGCGCTGCTCTCGCAGAGCCGGGAC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS GCA 72 bp | CACAGCGCCCCAAGCAGGGCCCGGGGGTCCCGGCTCTaGGAGAGCAGCGCTTCCGCGAGCACCCACTCCATT | + |
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Preference number: 6 (lower is better) Translates to: HSAPSRARGSRL*ESSASASTHSI Trigger: AATGGAGTGGGTGCTCGCGGAAGCGCTGCTCTCGCAGAGCCGGGACCCCCGGGCCCTGCTTGGGGCGCTGTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS CCA 72 bp | GGTGCGGGGAAAGAGAGGCAGACATGGGAACCACCGTaGGGGCTTCACAGACACTGGGTCCTGCACCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GAGKERQTWEPP*GLHRHWVLHRS Trigger: GGAGCGGTGCAGGACCCAGTGTCTGTGAAGCCCCCACGGTGGTTCCCATGTCTGCCTCTCTTTCCCCGCACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468077.5 |
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| CDS GCA 72 bp | GGGAACCACCGTGGGGGCTTCACAGACACTGGGTCCTaGACCGCTCCCTCACCCCATCCACGTCACTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: GNHRGGFTDTGS*TAPSPHPRHLL Trigger: AAGCAAGTGACGTGGATGGGGTGAGGGAGCGGTGCAGGACCCAGTGTCTGTGAAGCCCCCACGGTGGTTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000468077.5 |
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| CDS CCA 72 bp | TGCACCGTGACAGGTGCGGGGAAAGAGAGGCAGACATaGGAACCACCGTGGGGGCTTCACAGACACTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: CTVTGAGKERQT*EPPWGLHRHWV Trigger: GACCCAGTGTCTGTGAAGCCCCCACGGTGGTTCCCATGTCTGCCTCTCTTTCCCCGCACCTGTCACGGTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000468077.5 |
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| CDS GCA 72 bp | CATCATGGCTTGGTATCTCCGTGCGAGAGCAGCTGCTaGCTGGTGTACTCCCAGATCAGCAGGGCTCCACTC | + |
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Preference number: 6 (lower is better) Translates to: HHGLVSPCESSC*LVYSQISRAPL Trigger: GAGTGGAGCCCTGCTGATCTGGGAGTACACCAGGCAGCAGCTGCTCTCGCACGGAGATACCAAGCCATGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000483404.5 ENST00000496673.5 |
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| CDS GCA 72 bp | GCACATCATGGCTTGGTATCTCCGTGCGAGAGCAGCTaGTGCCTGGTGTACTCCCAGATCAGCAGGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: AHHGLVSPCESS*CLVYSQISRAP Trigger: TGGAGCCCTGCTGATCTGGGAGTACACCAGGCAGCAGCTGCTCTCGCACGGAGATACCAAGCCATGATGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000483404.5 ENST00000496673.5 |
||
| CDS TCA 72 bp | TCTGCTCCTCTGCGTGGGGCTTCTGCAGCGTCTGATTaGGCTGAAGAGAGGAAAGGAAGCTTTCCAGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SAPLRGASAASD*AEERKGSFPGA Trigger: GGCCCCTGGAAAGCTTCCTTTCCTCTCTTCAGCTCAATCAGACGCTGCAGAAGCCCCACGCAGAGGAGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000040877.2 |
||
| CDS GCA 72 bp | GCACTCCAAGGGGTGAGCATAACTGCTCTGCTCCTCTaGGTGGGGCTTCTGCAGCGTCTGATTGAGCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ALQGVSITALLL*VGLLQRLIELK Trigger: CTTCAGCTCAATCAGACGCTGCAGAAGCCCCACGCAGAGGAGCAGAGCAGTTATGCTCACCCCTTGGAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000040877.2 |
||
| CDS CCA 72 bp | ATGGCTTGGTATCTCCGTGCGAGAGCAGCTGCTGCCTaGTGTACTCCCAGATCAGCAGGGCTCCACTCACAT | + |
|
Preference number: 6 (lower is better) Translates to: MAWYLRARAAAA*CTPRSAGLHSH Trigger: ATGTGAGTGGAGCCCTGCTGATCTGGGAGTACACCAGGCAGCAGCTGCTCTCGCACGGAGATACCAAGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000483404.5 ENST00000496673.5 |
||
| CDS TCA 72 bp | TCCCATATGGAAGGAAGTCACTTGTGCAGCCCACACTaGAGGAGTGAGAAGTCACGCTCCCCCTCCCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SHMEGSHLCSPH*RSEKSRSPSLR Trigger: CCTGAGGGAGGGGGAGCGTGACTTCTCACTCCTTCAGTGTGGGCTGCACAAGTGACTTCCTTCCATATGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000483404.5 |
||
| CDS CCA 72 bp | GCTCCTACCAAATGCACTTCTCCCCTAAGGCTCACATaGAAATGCTTACCGGCTGCGCCTGGCAGCCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: APTKCTSPLRLT*KCLPAAPGSPV Trigger: AACTGGGCTGCCAGGCGCAGCCGGTAAGCATTTCCATGTGAGCCTTAGGGGAGAAGTGCATTTGGTAGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483404.5 |
||
| CDS CAA 72 bp | AGCAGCAGCAGTTCACTAAGGAAGGCACATCATGGCTaGGTATCTCCGTGCGAGAGCAGCTGCTGCCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSLRKAHHG*VSPCESSCCLV Trigger: CACCAGGCAGCAGCTGCTCTCGCACGGAGATACCAAGCCATGATGTGCCTTCCTTAGTGAACTGCTGCTGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000483404.5 ENST00000496673.5 |
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| CDS CAA 90 bp | AGTCTGAACAGCAGCAGCAGTTCACTAAGGAAGGCACATCATGGCTaGGTATCTCCGTGCGAGAGCAGCTGCTGCCTGGTGTACTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLNSSSSSLRKAHHG*VSPCESSCCLVYSQ Trigger: CTGGGAGTACACCAGGCAGCAGCTGCTCTCGCACGGAGATACCAAGCCATGATGTGCCTTCCTTAGTGAACTGCTGCTGCTGTTCAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000483404.5 ENST00000496673.5 |
||
| CDS TCA 72 bp | GTCGCTGATACACTGAAGGCTGCCAACAACGAGCACTaGAGCCCCAAATACCTCACAGGTCCTGCACAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VADTLKAANNEH*SPKYLTGPAQS Trigger: GGACTGTGCAGGACCTGTGAGGTATTTGGGGCTTCAGTGCTCGTTGTTGGCAGCCTTCAGTGTATCAGCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000040877.2 ENST00000462259.5 |
||
| CDS GCA 72 bp | TCACTAAGGAAGGCACATCATGGCTTGGTATCTCCGTaGGAGAGCAGCTGCTGCCTGGTGTACTCCCAGATC | + |
|
Preference number: 6 (lower is better) Translates to: SLRKAHHGLVSP*ESSCCLVYSQI Trigger: GATCTGGGAGTACACCAGGCAGCAGCTGCTCTCGCACGGAGATACCAAGCCATGATGTGCCTTCCTTAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000483404.5 ENST00000496673.5 |
||
| CDS GCA 72 bp | ATTCCTGGAGATGCTTATGACACTGCAGCCTGCTTCTaGACCGTGACAGGTGCGGGGAAAGAGAGGCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: IPGDAYDTAACF*TVTGAGKERQT Trigger: TGTCTGCCTCTCTTTCCCCGCACCTGTCACGGTGCAGAAGCAGGCTGCAGTGTCATAAGCATCTCCAGGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468077.5 |
||
| CDS CCA 72 bp | GAACAGCAGCAGCAGTTCACTAAGGAAGGCACATCATaGCTTGGTATCTCCGTGCGAGAGCAGCTGCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: EQQQQFTKEGTS*LGISVREQLLP Trigger: AGGCAGCAGCTGCTCTCGCACGGAGATACCAAGCCATGATGTGCCTTCCTTAGTGAACTGCTGCTGCTGTTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000483404.5 ENST00000496673.5 |
||
| CDS GCA 72 bp | ACCAAATGCACTTCTCCCCTAAGGCTCACATGGAAATaGTTACCGGCTGCGCCTGGCAGCCCAGTTTCTACT | + |
|
Preference number: 6 (lower is better) Translates to: TKCTSPLRLTWK*LPAAPGSPVST Trigger: AGTAGAAACTGGGCTGCCAGGCGCAGCCGGTAAGCATTTCCATGTGAGCCTTAGGGGAGAAGTGCATTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483404.5 |
||
| CDS TCA 72 bp | TCGGAAACACGACTGTTCCACGGGATAATCTTCTTCTaGACGTCGGTCCACTCCGCTTGGTTATCTGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: SETRLFHGIIFF*TSVHSAWLSAS Trigger: CGAAGCAGATAACCAAGCGGAGTGGACCGACGTTCAGAAGAAGATTATCCCGTGGAACAGTCGTGTTTCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000483404.5 ENST00000496673.5 |
||
| CDS GCA 72 bp | ACACCTCATCATCTTGGGCACTGGAACCTTTCAACCTaGATGTGTTCAACAGCTTCAACAGCAGCTGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: TPHHLGHWNLST*MCSTASTAAGG Trigger: GCCTCCAGCTGCTGTTGAAGCTGTTGAACACATGCAGGTTGAAAGGTTCCAGTGCCCAAGATGATGAGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000040877.2 |
||
| CDS CAA 72 bp | TCACAGGTCCTGCACAGTCCTCCTAAATTGGTCGGTTaGTCGATGAGCGAGGCCACAACGATGAGTCTACTA | + |
|
Preference number: 6 (lower is better) Translates to: SQVLHSPPKLVG*SMSEATTMSLL Trigger: TAGTAGACTCATCGTTGTGGCCTCGCTCATCGACAAACCGACCAATTTAGGAGGACTGTGCAGGACCTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040877.2 ENST00000462259.5 |
||
| CDS CAA 90 bp | CAGGGCTCCACTCACATGGACATTCAGGGAGCGGATAATGCCCTGTaGAGGAATTTCCACACAAACGTCCAACTGTTGGATCAGATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: QGSTHMDIQGADNAL*RNFHTNVQLLDQIC Trigger: GCAAATCTGATCCAACAGTTGGACGTTTGTGTGGAAATTCCTCAACAGGGCATTATCCGCTCCCTGAATGTCCATGTGAGTGGAGCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000471918.1 ENST00000483404.5 ENST00000496673.5 |
||
| CDS TCA 72 bp | GTCGATGAGCGAGGCCACAACGATGAGTCTACTAATTaGCTTTCCAAGTCTGGCAGCACGATCCTGAAACAG | + |
|
Preference number: 6 (lower is better) Translates to: VDERGHNDESTN*LSKSGSTILKQ Trigger: CTGTTTCAGGATCGTGCTGCCAGACTTGGAAAGTCAATTAGTAGACTCATCGTTGTGGCCTCGCTCATCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000483404.5 ENST00000496673.5 |
||
| CDS GCA 72 bp | GTTGCCAATTCTTCTTGGCATTCCCTGCTCCGTGCATaGTTTCCACTTGATGGAGGCTGGATTCAATCACAG | + |
|
Preference number: 6 (lower is better) Translates to: VANSSWHSLLRA*FPLDGGWIQSQ Trigger: CTGTGATTGAATCCAGCCTCCATCAAGTGGAAAGCATGCACGGAGCAGGGAATGCCAAGAAGAATTGGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000481183.1 ENST00000483404.5 |
||
| CDS CAA 72 bp | CCCAAATACCTCACAGGTCCTCCTAAATTGGTCGGTTaGTCGATGAGCGAGGCCACAACGATGAGTCTACTA | + |
|
Preference number: 6 (lower is better) Translates to: PKYLTGPPKLVG*SMSEATTMSLL Trigger: TAGTAGACTCATCGTTGTGGCCTCGCTCATCGACAAACCGACCAATTTAGGAGGACCTGTGAGGTATTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483404.5 |
||
| CDS TCA 72 bp | CTACTAATTGACTTTCCAAGTCTGGCAGCACGATCCTaGAACAGGAGCTCCAGGTCTAAGTCGGAAACACGA | + |
|
Preference number: 6 (lower is better) Translates to: LLIDFPSLAARS*NRSSRSKSETR Trigger: TCGTGTTTCCGACTTAGACCTGGAGCTCCTGTTTCAGGATCGTGCTGCCAGACTTGGAAAGTCAATTAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000483404.5 ENST00000496673.5 |
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| CDS TCA 72 bp | CTCACATGGACATTCAGGGAGCGGATAATGCCCTGTTaGGGAATTTCCACACAAACGTCCAACTGTTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: LTWTFRERIMPC*GISTQTSNCWI Trigger: GATCCAACAGTTGGACGTTTGTGTGGAAATTCCTCAACAGGGCATTATCCGCTCCCTGAATGTCCATGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000471918.1 ENST00000483404.5 ENST00000496673.5 |
||
| CDS TCA 72 bp | ACACAAAGTGCTGTCCTCCTCCTCACTACTGATTTCTaGGCTACTCTGTCTTCCCTAATGGTGATCCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: TQSAVLLLTTDF*ATLSSLMVILD Trigger: GTCCAGGATCACCATTAGGGAAGACAGAGTAGCTCAGAAATCAGTAGTGAGGAGGAGGACAGCACTTTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483404.5 |
||
| CDS CAA 72 bp | CGGGATAATCTTCTTCTGAACGTCGGTCCACTCCGCTaGGTTATCTGCTTCGACCAAATTAGTACCTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: RDNLLLNVGPLR*VICFDQISTCT Trigger: TGTGCAGGTACTAATTTGGTCGAAGCAGATAACCAAGCGGAGTGGACCGACGTTCAGAAGAAGATTATCCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS CAA 90 bp | GAGCTTCCATGTATGATTTTGTCCTGCTCCGTGCATGCTTTCCACTaGATGGAGGCTGGATTCAATCACAGGAGTCAGGGCATCAAATTC | + |
|
Preference number: 6 (lower is better) Translates to: ELPCMILSCSVHAFH*MEAGFNHRSQGIKF Trigger: GAATTTGATGCCCTGACTCCTGTGATTGAATCCAGCCTCCATCAAGTGGAAAGCATGCACGGAGCAGGACAAAATCATACATGGAAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468077.5 |
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| CDS CAA 90 bp | ACTGTTCCACGGGATAATCTTCTTCTGAACGTCGGTCCACTCCGCTaGGTTATCTGCTTCGACCAAATTAGTACCTATGTCTTGCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: TVPRDNLLLNVGPLR*VICFDQISTYVLLR Trigger: TCTCAGCAAGACATAGGTACTAATTTGGTCGAAGCAGATAACCAAGCGGAGTGGACCGACGTTCAGAAGAAGATTATCCCGTGGAACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000496673.5 |
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| CDS CAA 90 bp | GGGCCTCTCATTCTTCCCTCCTGGTCAAATGCGGTGCACAGGCATTaGCAATTTACTCAAGGAAAAACACATTCTCCCAGCTCTAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: GPLILPSWSNAVHRH*QFTQGKTHSPSSSF Trigger: AAAACTAGAGCTGGGAGAATGTGTTTTTCCTTGAGTAAATTGCAAATGCCTGTGCACCGCATTTGACCAGGAGGGAAGAATGAGAGGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000462259.5 ENST00000483404.5 |
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| CDS CAA 90 bp | ACTGTTCCACGGGATAATCTTCTTCTGAACGTCGGTCCACTCCGCTaGGTTATCTGCTTCGACCAAATTAGTACCTGCACAAATGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TVPRDNLLLNVGPLR*VICFDQISTCTNVL Trigger: GAGAACATTTGTGCAGGTACTAATTTGGTCGAAGCAGATAACCAAGCGGAGTGGACCGACGTTCAGAAGAAGATTATCCCGTGGAACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS TCA 72 bp | GTCTTCCCTAATGGTGATCCTGGACCCACACAGTACTaGGTAGTGGCAGGAAAATTAAGAAATGAGGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VFPNGDPGPTQY*VVAGKLRNEGE Trigger: TTCCCCCTCATTTCTTAATTTTCCTGCCACTACTCAGTACTGTGTGGGTCCAGGATCACCATTAGGGAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS GCA 72 bp | TTCTGGTCAAGTCTAGGGAAAAGTACCAGCAGAGTCTaGCACACTCGGTTTTTCACTCTGTGCTGTAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: FWSSLGKSTSRV*HTRFFTLCCRE Trigger: TTCTCTACAGCACAGAGTGAAAAACCGAGTGTGGCAGACTCTGCTGGTACTTTTCCCTAGACTTGACCAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000040877.2 ENST00000463793.1 |
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| CDS GCA 72 bp | CTTCTTCTGAACGTCGGTCCACTCCGCTTGGTTATCTaGTTCGACCAAATTAGTACCTATGTCTTGCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LLLNVGPLRLVI*FDQISTYVLLR Trigger: TCTCAGCAAGACATAGGTACTAATTTGGTCGAAGCAGATAACCAAGCGGAGTGGACCGACGTTCAGAAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000496673.5 |
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| CDS GCA 72 bp | CTTCTTCTGAACGTCGGTCCACTCCGCTTGGTTATCTaGTTCGACCAAATTAGTACCTGCACAAATGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLLNVGPLRLVI*FDQISTCTNVL Trigger: GAGAACATTTGTGCAGGTACTAATTTGGTCGAAGCAGATAACCAAGCGGAGTGGACCGACGTTCAGAAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS CCA 72 bp | TTATTTTGTTGCTCACACTGTTTCAGCTTCAGCCACTaGGAACATCTTCCCTCTGCATGCCCATCTCACATC | + |
|
Preference number: 6 (lower is better) Translates to: LFCCSHCFSFSH*EHLPSACPSHI Trigger: GATGTGAGATGGGCATGCAGAGGGAAGATGTTCCCAGTGGCTGAAGCTGAAACAGTGTGAGCAACAAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS CAA 72 bp | CGGGATAATCTTCTTCTGAACGTCGGTCCACTCCGCTaGGTTATCTGCTTCGACCAAATTAGTACCTATGTC | + |
|
Preference number: 6 (lower is better) Translates to: RDNLLLNVGPLR*VICFDQISTYV Trigger: GACATAGGTACTAATTTGGTCGAAGCAGATAACCAAGCGGAGTGGACCGACGTTCAGAAGAAGATTATCCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000496673.5 |
||
| CDS CAA 72 bp | ACTCACATGGACATTCAGGGAGCGGATAATGCCCTGTaGAGGAATTTCCACACAAACGTCCAACTGTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: THMDIQGADNAL*RNFHTNVQLLD Trigger: ATCCAACAGTTGGACGTTTGTGTGGAAATTCCTCAACAGGGCATTATCCGCTCCCTGAATGTCCATGTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000471918.1 ENST00000483404.5 ENST00000496673.5 |
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| CDS CAA 72 bp | TTAGCTGAGGTGGTTTTACCTCCTAAATTGGTCGGTTaGTCGATGAGCGAGGCCACAACGATGAGTCTACTA | + |
|
Preference number: 6 (lower is better) Translates to: LAEVVLPPKLVG*SMSEATTMSLL Trigger: TAGTAGACTCATCGTTGTGGCCTCGCTCATCGACAAACCGACCAATTTAGGAGGTAAAACCACCTCAGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496673.5 |
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| CDS CAA 90 bp | ATTCCTTCCACATCCACAGCCAGCAAGACCATCAGAGAAACAAGCTaGGCTTCAAACCAATCAGGCATAAAGCAGTTTTCTCCTGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: IPSTSTASKTIRETS*ASNQSGIKQFSPVS Trigger: GGAAACAGGAGAAAACTGCTTTATGCCTGATTGGTTTGAAGCCAAGCTTGTTTCTCTGATGGTCTTGCTGGCTGTGGATGTGGAAGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS CAA 90 bp | GCGGATAATGCCCTGTTGAGGAATTTCCACACAAACGTCCAACTGTaGGATCAGATTTGCTGGAATTCCCTCACGTTCATTTCCCAACAA | + |
|
Preference number: 6 (lower is better) Translates to: ADNALLRNFHTNVQL*DQICWNSLTFISQQ Trigger: TTGTTGGGAAATGAACGTGAGGGAATTCCAGCAAATCTGATCCAACAGTTGGACGTTTGTGTGGAAATTCCTCAACAGGGCATTATCCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000471918.1 ENST00000483404.5 ENST00000496673.5 |
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| CDS GCA 72 bp | CTGTTTCAGCTTCAGCCACTGGGAACATCTTCCCTCTaGATGCCCATCTCACATCACTGTATGTATAAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LFQLQPLGTSSL*MPISHHCMYKV Trigger: AACTTTATACATACAGTGATGTGAGATGGGCATGCAGAGGGAAGATGTTCCCAGTGGCTGAAGCTGAAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS CCA 72 bp | GCCCTTGTTACAGTCTTTTGTTATAACGATCCCATATaGAAGGAAGTCACTTGTGCAGCCCACACTGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ALVTVFCYNDPI*KEVTCAAHTEG Trigger: TCCTTCAGTGTGGGCTGCACAAGTGACTTCCTTCCATATGGGATCGTTATAACAAAAGACTGTAACAAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483404.5 |
||
| CDS CAA 72 bp | ATTCTTCCCTCCTGGTCAAATGCGGTGCACAGGCATTaGCAATTTACTCAAGGAAAAACACATTCTCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ILPSWSNAVHRH*QFTQGKTHSPS Trigger: GCTGGGAGAATGTGTTTTTCCTTGAGTAAATTGCAAATGCCTGTGCACCGCATTTGACCAGGAGGGAAGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000462259.5 ENST00000483404.5 |
||
| CDS CAA 90 bp | CTGAGAAAGTCAGAAATAGTCTTCAAGAGTCCCACTTCTGATGGCTaGAAAATGCTCCTAGAGCAAGATACCACACAAAGTGCTGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LRKSEIVFKSPTSDG*KMLLEQDTTQSAVL Trigger: GAGGACAGCACTTTGTGTGGTATCTTGCTCTAGGAGCATTTTCAAGCCATCAGAAGTGGGACTCTTGAAGACTATTTCTGACTTTCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483404.5 |
||
| CDS TCA 72 bp | AATTTTCCACGCCATGTCAAAAGACTCTATGCAGAGTaGTTCAGAGGAAGTCAGAAGCTTGGGAACCAACAC | + |
|
Preference number: 6 (lower is better) Translates to: NFPRHVKRLYAE*FRGSQKLGNQH Trigger: GTGTTGGTTCCCAAGCTTCTGACTTCCTCTGAATCACTCTGCATAGAGTCTTTTGACATGGCGTGGAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000040877.2 |
||
| CDS GCA 72 bp | CAAATTCATAGCTGTTTGAAGAAGGTAGCATTGGGCTaGCCCTCTCAGGAGAATCTGATGTGTGATCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: QIHSCLKKVALG*PSQENLMCDHS Trigger: ACTATGATCACACATCAGATTCTCCTGAGAGGGGCAGCCCAATGCTACCTTCTTCAAACAGCTATGAATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000040877.2 |
||
| CDS CCA 72 bp | TCAGCTATTTCTCCAGCGATCCCTGGTTCGTTTTATTaGAGAATGGTGTTAGCAACCAAGATCTTGGAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SAISPAIPGSFY*RMVLATKILEL Trigger: TAGCTCCAAGATCTTGGTTGCTAACACCATTCTCCAATAAAACGAACCAGGGATCGCTGGAGAAATAGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483404.5 |
||
| CDS CAA 72 bp | ACATCCACAGCCAGCAAGACCATCAGAGAAACAAGCTaGGCTTCAAACCAATCAGGCATAAAGCAGTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TSTASKTIRETS*ASNQSGIKQFS Trigger: AGAAAACTGCTTTATGCCTGATTGGTTTGAAGCCAAGCTTGTTTCTCTGATGGTCTTGCTGGCTGTGGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000040877.2 |
||
| CDS TCA 72 bp | GGAACACTGGTAAAACTTGATCAGAAGAAAGAACTGTaGGGGCTTCTAGTGCAGACTGCAAAGTCCTTATTG | + |
|
Preference number: 6 (lower is better) Translates to: GTLVKLDQKKEL*GLLVQTAKSLL Trigger: CAATAAGGACTTTGCAGTCTGCACTAGAAGCCCTCACAGTTCTTTCTTCTGATCAAGTTTTACCAGTGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000040877.2 |
||
| CDS GCA 72 bp | AATTTCCACACAAACGTCCAACTGTTGGATCAGATTTaGTGGAATTCCCTCACGTTCATTTCCCAACAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: NFHTNVQLLDQI*WNSLTFISQQE Trigger: CTCTTGTTGGGAAATGAACGTGAGGGAATTCCAGCAAATCTGATCCAACAGTTGGACGTTTGTGTGGAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000471918.1 ENST00000483404.5 ENST00000496673.5 |
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| CDS CAA 72 bp | GAATTTCCACACAAACGTCCAACTGTTGGATCAGATTaGCTGGAATTCCCTCACGTTCATTTCCCAACAAGA | + |
|
Preference number: 6 (lower is better) Translates to: EFPHKRPTVGSD*LEFPHVHFPTR Trigger: TCTTGTTGGGAAATGAACGTGAGGGAATTCCAGCAAATCTGATCCAACAGTTGGACGTTTGTGTGGAAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000471918.1 ENST00000483404.5 ENST00000496673.5 |
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| CDS CAA 72 bp | ATTCTTTGGGTTGTGATCCAACACTGCTTTATTTTGTaGCTCACACTGTTTCAGCTTCAGCCACTGGGAACA | + |
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Preference number: 6 (lower is better) Translates to: ILWVVIQHCFIL*LTLFQLQPLGT Trigger: TGTTCCCAGTGGCTGAAGCTGAAACAGTGTGAGCAACAAAATAAAGCAGTGTTGGATCACAACCCAAAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS TCA 72 bp | TCAGAAATGCTCTCTGTAGTAGACATGAAAAAGTTCTaGAGAACAGTAGACACCTCATCATCTTGGGCACTG | + |
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Preference number: 6 (lower is better) Translates to: SEMLSVVDMKKF*RTVDTSSSWAL Trigger: CAGTGCCCAAGATGATGAGGTGTCTACTGTTCTTCAGAACTTTTTCATGTCTACTACAGAGAGCATTTCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS TCA 72 bp | CAATATTTGCCGCACAGTCATGTCCAAGGTTTTCTATaGAGGTCTGTACATCCTGAACAAGTCTTTGATCAC | + |
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Preference number: 6 (lower is better) Translates to: QYLPHSHVQGFL*RSVHPEQVFDH Trigger: GTGATCAAAGACTTGTTCAGGATGTACAGACCTTCATAGAAAACCTTGGACATGACTGTGCGGCAAATATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS GCA 72 bp | CAGATAGGGTTACCCCTTTTCCACCCAACCTTCAAATaGAGATTTATAAGCTCAGTTAACACCATCAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: QIGLPLFHPTFK*RFISSVNTIRY Trigger: ATACCTGATGGTGTTAACTGAGCTTATAAATCTGCATTTGAAGGTTGGGTGGAAAAGGGGTAACCCTATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS GCA 72 bp | TCTACAAGATGCTCCAGGCTCATCTTGTATACTTTCTaGCCTAGTTTTAGAATCAGCTATTTCTCCAGCGAT | + |
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Preference number: 6 (lower is better) Translates to: STRCSRLILYTF*PSFRISYFSSD Trigger: ATCGCTGGAGAAATAGCTGATTCTAAAACTAGGGCAGAAAGTATACAAGATGAGCCTGGAGCATCTTGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS GCA 72 bp | TTAGTCTTCACAGCCTGGAGATGTCAAGCAATCCCTTaGTTTCTAAAATCACATGGTTCAACAGACACTGAA | + |
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Preference number: 6 (lower is better) Translates to: LVFTAWRCQAIP*FLKSHGSTDTE Trigger: TTCAGTGTCTGTTGAACCATGTGATTTTAGAAAGCAAGGGATTGCTTGACATCTCCAGGCTGTGAAGACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS CCA 72 bp | CCTAGTTTTAGAATCAGCTATTTCTCCAGCGATCCCTaGTTCGTTTTATTGGAGAATGGTGTTAGCAACCAA | + |
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Preference number: 6 (lower is better) Translates to: PSFRISYFSSDP*FVLLENGVSNQ Trigger: TTGGTTGCTAACACCATTCTCCAATAAAACGAACCAGGGATCGCTGGAGAAATAGCTGATTCTAAAACTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS CAA 72 bp | TTGCTCTCTGACTCTACAAGATGCTCCAGGCTCATCTaGTATACTTTCTGCCCTAGTTTTAGAATCAGCTAT | + |
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Preference number: 6 (lower is better) Translates to: LLSDSTRCSRLI*YTFCPSFRISY Trigger: ATAGCTGATTCTAAAACTAGGGCAGAAAGTATACAAGATGAGCCTGGAGCATCTTGTAGAGTCAGAGAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS CAA 72 bp | TTTATTCTTTGGGTTGTGATCCAACACTGCTTTATTTaGTTGCTCACACTGTTTCAGCTTCAGCCACTGGGA | + |
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Preference number: 6 (lower is better) Translates to: FILWVVIQHCFI*LLTLFQLQPLG Trigger: TCCCAGTGGCTGAAGCTGAAACAGTGTGAGCAACAAAATAAAGCAGTGTTGGATCACAACCCAAAGAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS CAA 72 bp | TCAGAAATAGTCTTCAAGAGTCCCACTTCTGATGGCTaGAAAATGCTCCTAGAGCAAGATACCACACAAAGT | + |
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Preference number: 6 (lower is better) Translates to: SEIVFKSPTSDG*KMLLEQDTTQS Trigger: ACTTTGTGTGGTATCTTGCTCTAGGAGCATTTTCAAGCCATCAGAAGTGGGACTCTTGAAGACTATTTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS CAA 90 bp | ATTTATTTTATTCTTTGGGTTGTGATCCAACACTGCTTTATTTTGTaGCTCACACTGTTTCAGCTTCAGCCACTGGGAACATCTTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: IYFILWVVIQHCFIL*LTLFQLQPLGTSSL Trigger: GAGGGAAGATGTTCCCAGTGGCTGAAGCTGAAACAGTGTGAGCAACAAAATAAAGCAGTGTTGGATCACAACCCAAAGAATAAAATAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS TCA 72 bp | TTAGGTCTAAACTTTTGGCAGTTTGTTCCACTCCAATaGTGGTATAACCTTCTGTTTTCTTCTGCTGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: LGLNFWQFVPLQ*WYNLLFSSAAD Trigger: ATCTGCAGCAGAAGAAAACAGAAGGTTATACCATCATTGGAGTGGAACAAACTGCCAAAAGTTTAGACCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000040877.2 ENST00000462259.5 ENST00000471918.1 ENST00000483404.5 ENST00000496673.5 |
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| CDS TCA 72 bp | CCCTTGCTTTCTAAAATCACATGGTTCAACAGACACTaGAGGTCAAAGGAAGTGACATATACTAATGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: PLLSKITWFNRH*RSKEVTYTNEG Trigger: TCCTTCATTAGTATATGTCACTTCCTTTGACCTTCAGTGTCTGTTGAACCATGTGATTTTAGAAAGCAAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS CAA 72 bp | TCTAATAGCTTGATTGCAAGATCCTCAATAAACAACTaGTGGGACATATTGGAGCCATCTAATAAACACAGG | + |
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Preference number: 6 (lower is better) Translates to: SNSLIARSSINN*WDILEPSNKHR Trigger: CCTGTGTTTATTAGATGGCTCCAATATGTCCCACAAGTTGTTTATTGAGGATCTTGCAATCAAGCTATTAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS CAA 72 bp | ATATCGGTGTGGGCTCGAGGATATTTATTTTATTCTTaGGGTTGTGATCCAACACTGCTTTATTTTGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: ISVWARGYLFYS*GCDPTLLYFVA Trigger: AGCAACAAAATAAAGCAGTGTTGGATCACAACCCAAAGAATAAAATAAATATCCTCGAGCCCACACCGATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000483404.5 |
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| CDS CAA 90 bp | AATAGCTTGATTGCAAGATCCTCAATAAACAACTTGTGGGACATATaGGAGCCATCTAATAAACACAGGAATTTGACAGCACAAATTCTC | + |
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Preference number: 6 (lower is better) Translates to: NSLIARSSINNLWDI*EPSNKHRNLTAQIL Trigger: GAGAATTTGTGCTGTCAAATTCCTGTGTTTATTAGATGGCTCCAATATGTCCCACAAGTTGTTTATTGAGGATCTTGCAATCAAGCTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS CCA 72 bp | AGATTTATAAGCTCAGTTAACACCATCAGGTATAAATaGCAACGATCCAGATCTGAAACACTATTTAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: RFISSVNTIRYK*QRSRSETLFSS Trigger: TGAGCTAAATAGTGTTTCAGATCTGGATCGTTGCCATTTATACCTGATGGTGTTAACTGAGCTTATAAATCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS CCA 72 bp | AATAGCTTGATTGCAAGATCCTCAATAAACAACTTGTaGGACATATTGGAGCCATCTAATAAACACAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: NSLIARSSINNL*DILEPSNKHRN Trigger: ATTCCTGTGTTTATTAGATGGCTCCAATATGTCCCACAAGTTGTTTATTGAGGATCTTGCAATCAAGCTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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| CDS CAA 72 bp | TTGGACTTGGACACTAATTCATCTTTATCTAATAGCTaGATTGCAAGATCCTCAATAAACAACTTGTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: LDLDTNSSLSNS*IARSSINNLWD Trigger: GTCCCACAAGTTGTTTATTGAGGATCTTGCAATCAAGCTATTAGATAAAGATGAATTAGTGTCCAAGTCCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000040877.2 |
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