RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TANC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000170921

Ensembl transcript IDs: ENST00000389520.8, ENST00000424789.6, ENST00000579541.1, ENST00000580068.5, ENST00000580466.1, ENST00000581143.1, ENST00000581424.1, ENST00000583016.1, ENST00000583356.5, ENST00000583545.1

Found 1450 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTAGGCTGAGTCCCGATGCGGGGGAGAGGAGGGTGGGCTCTGGATaGCCGGGAGCCCCTGGCTGGGCCGGGCCTCTGTCTGGAGGCCAA +
Preference number: 1 (lower is better)
Translates to: CRLSPDAGERRVGSG*PGAPGWAGPLSGGQ
Trigger: TTGGCCTCCAGACAGAGGCCCGGCCCAGCCAGGGGCTCCCGGTCATCCAGAGCCCACCCTCCTCTCCCCCGCATCGGGACTCAGCCTACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR TCA 90 bp CTCGGTGTGGAGGCAGCAGCCGGCTGCCTTTGCAGGTCGGTTTCTTaGGAAATGGGCAGCCCAGGAACAGACAGGCAGGGTGTGCGAGGC +
Preference number: 1 (lower is better)
Translates to: LGVEAAAGCLCRSVS*EMGSPGTDRQGVRG
Trigger: GCCTCGCACACCCTGCCTGTCTGTTCCTGGGCTGCCCATTTCTCAAGAAACCGACCTGCAAAGGCAGCCGGCTGCTGCCTCCACACCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CCA 90 bp GCAATAATCCTAATGCACACTGCAGACCTGGTGGCTGCAGGGCGCTaGCGGTCTGGGGAGGGGCCACAGCATGAGAATGCGCTGCGGCTG +
Preference number: 1 (lower is better)
Translates to: AIILMHTADLVAAGR*RSGEGPQHENALRL
Trigger: CAGCCGCAGCGCATTCTCATGCTGTGGCCCCTCCCCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGATTATTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR CCA 90 bp TGGAGGCAGCAGCCGGCTGCCTTTGCAGGTCGGTTTCTTGAGAAATaGGCAGCCCAGGAACAGACAGGCAGGGTGTGCGAGGCTGCTGGG +
Preference number: 1 (lower is better)
Translates to: WRQQPAAFAGRFLEK*AAQEQTGRVCEAAG
Trigger: CCCAGCAGCCTCGCACACCCTGCCTGTCTGTTCCTGGGCTGCCCATTTCTCAAGAAACCGACCTGCAAAGGCAGCCGGCTGCTGCCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR TCA 90 bp GCACGAAGACCCCTTCCAGGCCTCTGTTGCCTTCTCCTGAACCTCTaGGCCCGCTTGCCTGTTGCCCTGGAAGCAGCTCCTCTCTCCCGA +
Preference number: 1 (lower is better)
Translates to: ARRPLPGLCCLLLNL*ARLPVALEAAPLSR
Trigger: TCGGGAGAGAGGAGCTGCTTCCAGGGCAACAGGCAAGCGGGCTCAGAGGTTCAGGAGAAGGCAACAGAGGCCTGGAAGGGGTCTTCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CCA 90 bp AATGAGCGCGGCGCTGGCCTGATCTCTACGCGTCCAGCGGCAGCCTaGCAAGTCAGCTCAGCGTCGGTATCAGAGTCAGCAGGAGGCAAT +
Preference number: 1 (lower is better)
Translates to: NERGAGLISTRPAAA*QVSSASVSESAGGN
Trigger: ATTGCCTCCTGCTGACTCTGATACCGACGCTGAGCTGACTTGCCAGGCTGCCGCTGGACGCGTAGAGATCAGGCCAGCGCCGCGCTCATT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CCA 90 bp GGGCTCTGGATGACCGGGAGCCCCTGGCTGGGCCGGGCCTCTGTCTaGAGGCCAATGGAAACATTTTCAACATCCTGTTCCAGGTACTCC +
Preference number: 1 (lower is better)
Translates to: GLWMTGSPWLGRASV*RPMETFSTSCSRYS
Trigger: GGAGTACCTGGAACAGGATGTTGAAAATGTTTCCATTGGCCTCCAGACAGAGGCCCGGCCCAGCCAGGGGCTCCCGGTCATCCAGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CCA 90 bp GTGCTTGAATGGACGGCTGGGCTGGGCTGGTTACTTCTCACAATCTaGGCCTTGGCAGGCTGTAGCCTGAGCCCTTGCTGGGGAACTGCC +
Preference number: 1 (lower is better)
Translates to: VLEWTAGLGWLLLTI*ALAGCSLSPCWGTA
Trigger: GGCAGTTCCCCAGCAAGGGCTCAGGCTACAGCCTGCCAAGGCCCAGATTGTGAGAAGTAACCAGCCCAGCCCAGCCGTCCATTCAAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR TCA 90 bp GGGAGGGGCCACAGCATGAGAATGCGCTGCGGCTGGCTGTGTGGGTaGCACTGGCTAAGGATGCAAAGGCAAAGGGGCATCGCACTCTTT +
Preference number: 1 (lower is better)
Translates to: GRGHSMRMRCGWLCG*HWLRMQRQRGIALF
Trigger: AAAGAGTGCGATGCCCCTTTGCCTTTGCATCCTTAGCCAGTGTCACCCACACAGCCAGCCGCAGCGCATTCTCATGCTGTGGCCCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR TCA 90 bp TTCCACAGAGTAGGTCTACCTGGAAAAATGAGCGCGGCGCTGGCCTaGTCTCTACGCGTCCAGCGGCAGCCTGGCAAGTCAGCTCAGCGT +
Preference number: 1 (lower is better)
Translates to: FHRVGLPGKMSAALA*SLRVQRQPGKSAQR
Trigger: ACGCTGAGCTGACTTGCCAGGCTGCCGCTGGACGCGTAGAGATCAGGCCAGCGCCGCGCTCATTTTTCCAGGTAGACCTACTCTGTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR TCA 90 bp TGGGCTGGTTACTTCTCACAATCTGGGCCTTGGCAGGCTGTAGCCTaGGCCCTTGCTGGGGAACTGCCACAGGGAGCTGAGGCATCTGGT +
Preference number: 1 (lower is better)
Translates to: WAGYFSQSGPWQAVA*ALAGELPQGAEASG
Trigger: ACCAGATGCCTCAGCTCCCTGTGGCAGTTCCCCAGCAAGGGCTCAGGCTACAGCCTGCCAAGGCCCAGATTGTGAGAAGTAACCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR GCA 90 bp GAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTaGATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACC +
Preference number: 1 (lower is better)
Translates to: EKLKSWLPGGRFPVG*MQRISACGLPPLNT
Trigger: GGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR CCA 90 bp GGGAGAGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTaGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATT +
Preference number: 1 (lower is better)
Translates to: GREHVAGHRQEKLKS*LPGGRFPVGCMQRI
Trigger: AATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR CCA 90 bp AACCAGACTGGGATCTATAGACACTCATACTTTCAGCTGGAGGGCTaGCCCGATACTGAGGGCCTCTCCGGAGAGGGGAAGGGGGAGGGC +
Preference number: 1 (lower is better)
Translates to: NQTGIYRHSYFQLEG*PDTEGLSGEGKGEG
Trigger: GCCCTCCCCCTTCCCCTCTCCGGAGAGGCCCTCAGTATCGGGCCAGCCCTCCAGCTGAAAGTATGAGTGTCTATAGATCCCAGTCTGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CCA 90 bp CTTTGGTCAATCCTCCATGCTGACAGATGGCGCCTGCACTCAGGCTaGCTTGGACATGCTGCACCGGCCTTCCATCCCCTACGATTCCCC +
Preference number: 1 (lower is better)
Translates to: LWSILHADRWRLHSG*LGHAAPAFHPLRFP
Trigger: GGGGAATCGTAGGGGATGGAAGGCCGGTGCAGCATGTCCAAGCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR GCA 90 bp TGGAAGATCCTCTTTGGTCAATCCTCCATGCTGACAGATGGCGCCTaGACTCAGGCTGGCTTGGACATGCTGCACCGGCCTTCCATCCCC +
Preference number: 1 (lower is better)
Translates to: WKILFGQSSMLTDGA*TQAGLDMLHRPSIP
Trigger: GGGGATGGAAGGCCGGTGCAGCATGTCCAAGCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAGAGGATCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CCA 90 bp TACTGGACCGGAAGTCAAAAACCTGATGAGAGCCAAGAGGTGAGCTaGAGATGTAGGCTGAGTCCCGATGCGGGGGAGAGGAGGGTGGGC +
Preference number: 1 (lower is better)
Translates to: YWTGSQKPDESQEVS*RCRLSPDAGERRVG
Trigger: GCCCACCCTCCTCTCCCCCGCATCGGGACTCAGCCTACATCTCCAGCTCACCTCTTGGCTCTCATCAGGTTTTTGACTTCCGGTCCAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CCA 90 bp GTCGCTGTGGAAGATCCTCTTTGGTCAATCCTCCATGCTGACAGATaGCGCCTGCACTCAGGCTGGCTTGGACATGCTGCACCGGCCTTC +
Preference number: 1 (lower is better)
Translates to: VAVEDPLWSILHADR*RLHSGWLGHAAPAF
Trigger: GAAGGCCGGTGCAGCATGTCCAAGCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAGAGGATCTTCCACAGCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CCA 90 bp CGCCACCTCGGTATGCTGAGGAAGGTCGCTGTGGAAGATCCTCTTTaGTCAATCCTCCATGCTGACAGATGGCGCCTGCACTCAGGCTGG +
Preference number: 1 (lower is better)
Translates to: RHLGMLRKVAVEDPL*SILHADRWRLHSGW
Trigger: CCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAGAGGATCTTCCACAGCGACCTTCCTCAGCATACCGAGGTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR TCA 90 bp GAGGAAGGTCGCTGTGGAAGATCCTCTTTGGTCAATCCTCCATGCTaGCAGATGGCGCCTGCACTCAGGCTGGCTTGGACATGCTGCACC +
Preference number: 1 (lower is better)
Translates to: EEGRCGRSSLVNPPC*QMAPALRLAWTCCT
Trigger: GGTGCAGCATGTCCAAGCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAGAGGATCTTCCACAGCGACCTTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR TCA 90 bp TACTGGCCATTGAATGGGCTACTTGGCCATAGGCTCCTGTGGGGATaGCGGTGCTTGAATGGACGGCTGGGCTGGGCTGGTTACTTCTCA +
Preference number: 1 (lower is better)
Translates to: YWPLNGLLGHRLLWG*RCLNGRLGWAGYFS
Trigger: TGAGAAGTAACCAGCCCAGCCCAGCCGTCCATTCAAGCACCGTCATCCCCACAGGAGCCTATGGCCAAGTAGCCCATTCAATGGCCAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR TCA 90 bp AAGGCAATGTTGCTGATGGATGATGGTGGACTGAAGGACTCAGGCTaGGGCAGGTTGCCTGGAGACGTGGGACTGAGGACGGTGTCCACA +
Preference number: 1 (lower is better)
Translates to: KAMLLMDDGGLKDSG*GRLPGDVGLRTVST
Trigger: TGTGGACACCGTCCTCAGTCCCACGTCTCCAGGCAACCTGCCTCAGCCTGAGTCCTTCAGTCCACCATCATCCATCAGCAACATTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR TCA 90 bp TGGCCACCATGTGGCCACAAGCATCTCAGGGTGGCTCACCTGCTGTaGGGCTTTGGACACCGAAATGAAGGTTACCAACACTTCAGCCCT +
Preference number: 1 (lower is better)
Translates to: WPPCGHKHLRVAHLL*GFGHRNEGYQHFSP
Trigger: AGGGCTGAAGTGTTGGTAACCTTCATTTCGGTGTCCAAAGCCTCACAGCAGGTGAGCCACCCTGAGATGCTTGTGGCCACATGGTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR TCA 90 bp TTGGACATGCTGCACCGGCCTTCCATCCCCTACGATTCCCCCAATTaGCCCTTGATAAACCAACCGGCTCTGGCTGACTCCTATGTCTCC +
Preference number: 1 (lower is better)
Translates to: LDMLHRPSIPYDSPN*PLINQPALADSYVS
Trigger: GGAGACATAGGAGTCAGCCAGAGCCGGTTGGTTTATCAAGGGTCAATTGGGGGAATCGTAGGGGATGGAAGGCCGGTGCAGCATGTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR GCA 90 bp TATATCCTGTACAGAGTATATGTCTTCATGCTGTGGCTCAGGTTCTaGTTCTTCCGGCAACTGCTGCTGAGGCTGCGGTGGCGGCGGTGG +
Preference number: 1 (lower is better)
Translates to: YILYRVYVFMLWLRF*FFRQLLLRLRWRRW
Trigger: CCACCGCCGCCACCGCAGCCTCAGCAGCAGTTGCCGGAAGAAGCAGAACCTGAGCCACAGCATGAAGACATATACTCTGTACAGGATATA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR GCA 90 bp GACTCCACGAACGGTCTCTTTGGTTTGATAGGGGATGTCTGCCCTTaGCGAGAGTCTCGGGACAGCTGCCTGTACAGGTTGTCCTGGTAT +
Preference number: 1 (lower is better)
Translates to: DSTNGLFGLIGDVCP*RESRDSCLYRLSWY
Trigger: ATACCAGGACAACCTGTACAGGCAGCTGTCCCGAGACTCTCGGCAAGGGCAGACATCCCCTATCAAACCAAAGAGACCGTTCGTGGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CCA 90 bp CAAAGCTCTGACTGTGGCCACCATGTGGCCACAAGCATCTCAGGGTaGCTCACCTGCTGTGAGGCTTTGGACACCGAAATGAAGGTTACC +
Preference number: 1 (lower is better)
Translates to: QSSDCGHHVATSISG*LTCCEALDTEMKVT
Trigger: GGTAACCTTCATTTCGGTGTCCAAAGCCTCACAGCAGGTGAGCCACCCTGAGATGCTTGTGGCCACATGGTGGCCACAGTCAGAGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR TCA 90 bp GGGCCATTTTGGATAATGGAGATTTGGGTCTGCCAGGAAGCTGACTaGCGCTTGTTTCCTGCTGATAGCGCACGGGTGAACCAGACTGGG +
Preference number: 1 (lower is better)
Translates to: GPFWIMEIWVCQEAD*RLFPADSARVNQTG
Trigger: CCCAGTCTGGTTCACCCGTGCGCTATCAGCAGGAAACAAGCGTCAGTCAGCTTCCTGGCAGACCCAAATCTCCATTATCCAAAATGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR TCA 90 bp TCCGATCTGTGGTGTCTGGCTGTATCTCACGCCACCTCGGTATGCTaGGGAAGGTCGCTGTGGAAGATCCTCTTTGGTCAATCCTCCATG +
Preference number: 1 (lower is better)
Translates to: SDLWCLAVSHATSVC*GRSLWKILFGQSSM
Trigger: CATGGAGGATTGACCAAAGAGGATCTTCCACAGCGACCTTCCTCAGCATACCGAGGTGGCGTGAGATACAGCCAGACACCACAGATCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR GCA 90 bp ACAGCCAGTGCCAGGCCTGTGCCGAGGCTTTGGTTCCAATGTTCTTaGTATCCACTCAATAGTGGCCTCGCTCACTCAAAGGTCAGCCTA +
Preference number: 1 (lower is better)
Translates to: TASARPVPRLWFQCS*YPLNSGLAHSKVSL
Trigger: TAGGCTGACCTTTGAGTGAGCGAGGCCACTATTGAGTGGATAGCAAGAACATTGGAACCAAAGCCTCGGCACAGGCCTGGCACTGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR GCA 90 bp ACATTAGACTCCACGAACGGTCTCTTTGGTTTGATAGGGGATGTCTaGCCTTGCCGAGAGTCTCGGGACAGCTGCCTGTACAGGTTGTCC +
Preference number: 1 (lower is better)
Translates to: TLDSTNGLFGLIGDV*PCRESRDSCLYRLS
Trigger: GGACAACCTGTACAGGCAGCTGTCCCGAGACTCTCGGCAAGGGCAGACATCCCCTATCAAACCAAAGAGACCGTTCGTGGAGTCTAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CCA 90 bp TCCTCCCACCTGAAGCCAGACATGGACTCAGCGAGTGTTTGCTGCTaGGGAAGGGGCAGCTCTGAAATACAGTACTCGGATCATTCCATG +
Preference number: 1 (lower is better)
Translates to: SSHLKPDMDSASVCC*GRGSSEIQYSDHSM
Trigger: CATGGAATGATCCGAGTACTGTATTTCAGAGCTGCCCCTTCCCCAGCAGCAAACACTCGCTGAGTCCATGTCTGGCTTCAGGTGGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CCA 90 bp GAAGCGAAGGCCTACACTTTGGGAATGCAGCAACGGCCTGGGAGTTaGCGGGTGCGGTTTGATTTCGTTAGGGTTGACACTGATAGGTCT +
Preference number: 1 (lower is better)
Translates to: EAKAYTLGMQQRPGS*RVRFDFVRVDTDRS
Trigger: AGACCTATCAGTGTCAACCCTAACGAAATCAAACCGCACCCGCCAACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGGCCTTCGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR TCA 90 bp GGCATATTTGTAAAGCTACAGGACCTGCTCATTCGCCTGGACAGGTaGGTGCGGGTGGTGTGTGGCGTTCCAAATGAGCAGGAGCACTTT +
Preference number: 1 (lower is better)
Translates to: GIFVKLQDLLIRLDR*VRVVCGVPNEQEHF
Trigger: AAAGTGCTCCTGCTCATTTGGAACGCCACACACCACCCGCACTCACCTGTCCAGGCGAATGAGCAGGTCCTGTAGCTTTACAAATATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR TCA 90 bp GCCAGGAAGCTGACTGACGCTTGTTTCCTGCTGATAGCGCACGGGTaGACCAGACTGGGATCTATAGACACTCATACTTTCAGCTGGAGG +
Preference number: 1 (lower is better)
Translates to: ARKLTDACFLLIAHG*TRLGSIDTHTFSWR
Trigger: CCTCCAGCTGAAAGTATGAGTGTCTATAGATCCCAGTCTGGTTCACCCGTGCGCTATCAGCAGGAAACAAGCGTCAGTCAGCTTCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR GCA 90 bp GATCTAGTTTTGAGTGACAGACTGGGTAATAGGATGCTGACTGGCTaGGTCCGATCTGTGGTGTCTGGCTGTATCTCACGCCACCTCGGT +
Preference number: 1 (lower is better)
Translates to: DLVLSDRLGNRMLTG*VRSVVSGCISRHLG
Trigger: ACCGAGGTGGCGTGAGATACAGCCAGACACCACAGATCGGACGCAGCCAGTCAGCATCCTATTACCCAGTCTGTCACTCAAAACTAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CCA 90 bp GTTCATTTGGTACTGACTTTCAAAGCTCTGACTGTGGCCACCATGTaGCCACAAGCATCTCAGGGTGGCTCACCTGCTGTGAGGCTTTGG +
Preference number: 1 (lower is better)
Translates to: VHLVLTFKALTVATM*PQASQGGSPAVRLW
Trigger: CCAAAGCCTCACAGCAGGTGAGCCACCCTGAGATGCTTGTGGCCACATGGTGGCCACAGTCAGAGCTTTGAAAGTCAGTACCAAATGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CCA 90 bp GAGGAGATACTATTGCTAGATGGAGAGAAGCGAAGGCCTACACTTTaGGAATGCAGCAACGGCCTGGGAGTTGGCGGGTGCGGTTTGATT +
Preference number: 1 (lower is better)
Translates to: EEILLLDGEKRRPTL*ECSNGLGVGGCGLI
Trigger: AATCAAACCGCACCCGCCAACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGGCCTTCGCTTCTCTCCATCTAGCAATAGTATCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR TCA 90 bp GGGGTAACCTCCTTGAGTTGGAGACACTGGCGACAGCTCGTCACATaGCCTCTCATATGCAGGTTTCAGTGGGATCTCCATTTGCTGGAT +
Preference number: 1 (lower is better)
Translates to: GVTSLSWRHWRQLVT*PLICRFQWDLHLLD
Trigger: ATCCAGCAAATGGAGATCCCACTGAAACCTGCATATGAGAGGTCATGTGACGAGCTGTCGCCAGTGTCTCCAACTCAAGGAGGTTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR GCA 90 bp AGGCCTACACTTTGGGAATGCAGCAACGGCCTGGGAGTTGGCGGGTaGGGTTTGATTTCGTTAGGGTTGACACTGATAGGTCTTCTGATT +
Preference number: 1 (lower is better)
Translates to: RPTLWECSNGLGVGG*GLISLGLTLIGLLI
Trigger: AATCAGAAGACCTATCAGTGTCAACCCTAACGAAATCAAACCGCACCCGCCAACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CCA 90 bp CTCCTCCTCGAATATATCCTGTACAGAGTATATGTCTTCATGCTGTaGCTCAGGTTCTGCTTCTTCCGGCAACTGCTGCTGAGGCTGCGG +
Preference number: 1 (lower is better)
Translates to: LLLEYILYRVYVFML*LRFCFFRQLLLRLR
Trigger: CCGCAGCCTCAGCAGCAGTTGCCGGAAGAAGCAGAACCTGAGCCACAGCATGAAGACATATACTCTGTACAGGATATATTCGAGGAGGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CCA 90 bp ATGACCTCTCATATGCAGGTTTCAGTGGGATCTCCATTTGCTGGATaGAAGAAGATGGCCGGAAGGTCGGAGTTAGGTTGGAGGTGGAGG +
Preference number: 1 (lower is better)
Translates to: MTSHMQVSVGSPFAG*KKMAGRSELGWRWR
Trigger: CCTCCACCTCCAACCTAACTCCGACCTTCCGGCCATCTTCTTCCATCCAGCAAATGGAGATCCCACTGAAACCTGCATATGAGAGGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR TCA 90 bp GCATCTCAGGGTGGCTCACCTGCTGTGAGGCTTTGGACACCGAAATaGAGGTTACCAACACTTCAGCCCTTGAGTGGTCTGTATGACAAA +
Preference number: 1 (lower is better)
Translates to: ASQGGSPAVRLWTPK*RLPTLQPLSGLYDK
Trigger: TTTGTCATACAGACCACTCAAGGGCTGAAGTGTTGGTAACCTTCATTTCGGTGTCCAAAGCCTCACAGCAGGTGAGCCACCCTGAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR GCA 90 bp GACCTAGAAGATGTGTCTTCTAGACAAGCTTCAAGATCAGAAGCTTaGTGTCTATCTCATGCCCCCACCCAGGGCTGCAAAACAGGGCTG +
Preference number: 1 (lower is better)
Translates to: DLEDVSSRQASRSEA*CLSHAPTQGCKTGL
Trigger: CAGCCCTGTTTTGCAGCCCTGGGTGGGGGCATGAGATAGACAGCAAGCTTCTGATCTTGAAGCTTGTCTAGAAGACACATCTTCTAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR GCA 90 bp AAGCATGTAGTGTTCAAAGAGTTCGTCTTGCACAACTGGCACAGATaGACGAAGACCCCTTCCAGGCCTCTGTTGCCTTCTCCTGAACCT +
Preference number: 1 (lower is better)
Translates to: KHVVFKEFVLHNWHR*TKTPSRPLLPSPEP
Trigger: AGGTTCAGGAGAAGGCAACAGAGGCCTGGAAGGGGTCTTCGTGCATCTGTGCCAGTTGTGCAAGACGAACTCTTTGAACACTACATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR GCA 90 bp ATACTATTGCTAGATGGAGAGAAGCGAAGGCCTACACTTTGGGAATaGAGCAACGGCCTGGGAGTTGGCGGGTGCGGTTTGATTTCGTTA +
Preference number: 1 (lower is better)
Translates to: ILLLDGEKRRPTLWE*SNGLGVGGCGLISL
Trigger: TAACGAAATCAAACCGCACCCGCCAACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGGCCTTCGCTTCTCTCCATCTAGCAATAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR GCA 90 bp TCGTCACATGACCTCTCATATGCAGGTTTCAGTGGGATCTCCATTTaGTGGATGGAAGAAGATGGCCGGAAGGTCGGAGTTAGGTTGGAG +
Preference number: 1 (lower is better)
Translates to: SSHDLSYAGFSGISI*WMEEDGRKVGVRLE
Trigger: CTCCAACCTAACTCCGACCTTCCGGCCATCTTCTTCCATCCAGCAAATGGAGATCCCACTGAAACCTGCATATGAGAGGTCATGTGACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CCA 90 bp TACCAGAGCAAGGGAGCTCTGGTCAACCTTCTTCCAGCCTCTGCCTaGCTGAAGTCCAAAGCATGTAGTGTTCAAAGAGTTCGTCTTGCA +
Preference number: 1 (lower is better)
Translates to: YQSKGALVNLLPASA*LKSKACSVQRVRLA
Trigger: TGCAAGACGAACTCTTTGAACACTACATGCTTTGGACTTCAGCCAGGCAGAGGCTGGAAGAAGGTTGACCAGAGCTCCCTTGCTCTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR GCA 90 bp AGGGCACAGGGCACAGGCAGTCTGCTTGTAAGGAAAAACGTCTCCTaGCCCAACAAGCTCTGGTTGGCATATTCTAGTCAAAAACAACTG +
Preference number: 1 (lower is better)
Translates to: RAQGTGSLLVRKNVS*PNKLWLAYSSQKQL
Trigger: CAGTTGTTTTTGACTAGAATATGCCAACCAGAGCTTGTTGGGGCAGGAGACGTTTTTCCTTACAAGCAGACTGCCTGTGCCCTGTGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR TCA 90 bp TGCCGCTGTTCTTTGCTACAAAACAAGCGCAGTGCAGAGCCACAGTaGCACCTAGTGGTAAACTATGGTGAAGCACAAGTGACATCCACA +
Preference number: 1 (lower is better)
Translates to: CRCSLLQNKRSAEPQ*HLVVNYGEAQVTST
Trigger: TGTGGATGTCACTTGTGCTTCACCATAGTTTACCACTAGGTGTCACTGTGGCTCTGCACTGCGCTTGTTTTGTAGCAAAGAACAGCGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR TCA 90 bp CTACGATTCCCCCAATTGACCCTTGATAAACCAACCGGCTCTGGCTaGCTCCTATGTCTCCTTGTGAAGACTGGTATTTACTGGCCATTG +
Preference number: 1 (lower is better)
Translates to: LRFPQLTLDKPTGSG*LLCLLVKTGIYWPL
Trigger: CAATGGCCAGTAAATACCAGTCTTCACAAGGAGACATAGGAGTCAGCCAGAGCCGGTTGGTTTATCAAGGGTCAATTGGGGGAATCGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR GCA 90 bp GGTTTGATTTCGTTAGGGTTGACACTGATAGGTCTTCTGATTAAATaGGACACATCAGGGGAACCTAGTTGGCTGGAGGAGCGCTCCAGA +
Preference number: 1 (lower is better)
Translates to: GLISLGLTLIGLLIK*DTSGEPSWLEERSR
Trigger: TCTGGAGCGCTCCTCCAGCCAACTAGGTTCCCCTGATGTGTCGCATTTAATCAGAAGACCTATCAGTGTCAACCCTAACGAAATCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR GCA 90 bp AGTTGTTTAGTTGTAAGAGCTGATGTACAGCCAGTGCCAGGCCTGTaGCGAGGCTTTGGTTCCAATGTTCTTGCTATCCACTCAATAGTG +
Preference number: 1 (lower is better)
Translates to: SCLVVRADVQPVPGL*RGFGSNVLAIHSIV
Trigger: CACTATTGAGTGGATAGCAAGAACATTGGAACCAAAGCCTCGGCACAGGCCTGGCACTGGCTGTACATCAGCTCTTACAACTAAACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR TCA 90 bp TTGTTTCGTTTCAGTTGCTTAGTTGAGTTGTTTAGTTGTAAGAGCTaGTGTACAGCCAGTGCCAGGCCTGTGCCGAGGCTTTGGTTCCAA +
Preference number: 1 (lower is better)
Translates to: LFRFSCLVELFSCKS*CTASARPVPRLWFQ
Trigger: TTGGAACCAAAGCCTCGGCACAGGCCTGGCACTGGCTGTACATCAGCTCTTACAACTAAACAACTCAACTAAGCAACTGAAACGAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR CCA 90 bp TCAAAGGGCACTTACTTACTTACTTACTTACCAGACACATGGGACTaGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGC +
Preference number: 1 (lower is better)
Translates to: SKGTYLLTYLPDTWD*SQPDFYSGNCPSCS
Trigger: GCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGTAAGTAAGTAAGTAAGTGCCCTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR CCA 90 bp ATAGATCTCAAAATGGAAGTAGACAACAACGGGCATGACCCTGGGTaGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATC +
Preference number: 1 (lower is better)
Translates to: IDLKMEVDNNGHDPG*KYWDSVSWSQEIPI
Trigger: GATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCATTTTGAGATCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR CCA 90 bp ATCCCTTCAAAGGGCACTTACTTACTTACTTACTTACCAGACACATaGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCC +
Preference number: 1 (lower is better)
Translates to: IPSKGTYLLTYLPDT*DWSQPDFYSGNCPS
Trigger: GGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGTAAGTAAGTAAGTAAGTGCCCTTTGAAGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR TCA 90 bp TCCTGGGCCAATGGAACATACAACTTGGTGAGAAACCTATTAAACTaGAGTTTGTCACCTCTGTCCTCCATTTCAGGGTGGTATGAATTG +
Preference number: 1 (lower is better)
Translates to: SWANGTYNLVRNLLN*SLSPLSSISGWYEL
Trigger: CAATTCATACCACCCTGAAATGGAGGACAGAGGTGACAAACTTCAGTTTAATAGGTTTCTCACCAAGTTGTATGTTCCATTGGCCCAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CCA 90 bp AAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTaGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCAC +
Preference number: 1 (lower is better)
Translates to: KDNYTTRTSVKAIVS*KKLTSVSDLPGLKH
Trigger: GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR GCA 90 bp TTGTGGCAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGCATTTCTaGAGTAGAAAAATAACTCTCTCTGAATCAAACCACCCAACTGTG +
Preference number: 1 (lower is better)
Translates to: LWQRFSEHWFCPRHF*SRKITLSESNHPTV
Trigger: CACAGTTGGGTGGTTTGATTCAGAGAGAGTTATTTTTCTACTGCAGAAATGCCTTGGACAAAACCAGTGCTCACTGAATCTTTGCCACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR TCA 90 bp CCTGGATCGGGTGGGCTCACTGGGGTAACCTCCTTGAGTTGGAGACACTGGCGAGGGCTGGCCCGATACTaGGGGCCTCTCCGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: PGSGGLTGVTSLSWRHWRGLARY*GPLRRG
Trigger: CCCTCTCCGGAGAGGCCCTCAGTATCGGGCCAGCCC...TCGCCAGTGTCTCCAACTCAAGGAGGTTACCCCAGTGAGCCCACCCGATCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR CCA 90 bp GAGAAGCGAAGGCCTACACTTTGGGAATGCAGCAACGGCCTGGGAGTTGGCGGGATGACCGGGAGCCCCTaGCTGGGCCGGGCCTCTGTC +
Preference number: 2 (lower is better)
Translates to: EKRRPTLWECSNGLGVGGMTGSP*LGRASV
Trigger: GACAGAGGCCCGGCCCAGCCAGGGGCTCCCGGTCAT...CCCGCCAACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGGCCTTCGCTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR CCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGACACTGCAGACCTGGTaGCTGCAGGGCGCTGGCGGT +
Preference number: 2 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMTLQTW*LQGAGG
Trigger: ACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGT...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR CCA 90 bp GCTCTGCACAGTGGCTCCACCAGCCCCATTGTGCTTGTGTCCAGGCCCCCAGCCACCTGCTCATTCGCCTaGACAGGTGAGTGCGGGTGG +
Preference number: 2 (lower is better)
Translates to: ALHSGSTSPIVLVSRPPATCSFA*TGECGW
Trigger: CCACCCGCACTCACCTGTCCAGGCGAATGAGCAGGT...GGCTGGGGGCCTGGACACAAGCACAATGGGGCTGGTGGAGCCACTGTGCAGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CAA 90 bp CCTCGGTGTGGAGGCAGCAGCCGGCTGCCTTTGCAGGTCGGTTTCTaGAGAAATGGGCAGCCCAGGAACAGACAGGCAGGGTGTGCGAGG +
Preference number: 2 (lower is better)
Translates to: PRCGGSSRLPLQVGF*RNGQPRNRQAGCAR
Trigger: CCTCGCACACCCTGCCTGTCTGTTCCTGGGCTGCCCATTTCTCAAGAAACCGACCTGCAAAGGCAGCCGGCTGCTGCCTCCACACCGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CAA 90 bp GCAGGACCGCACAGCCCTCGGTGTGGAGGCAGCAGCCGGCTGCCTTaGCAGGTCGGTTTCTTGAGAAATGGGCAGCCCAGGAACAGACAG +
Preference number: 2 (lower is better)
Translates to: AGPHSPRCGGSSRLP*QVGFLRNGQPRNRQ
Trigger: CTGTCTGTTCCTGGGCTGCCCATTTCTCAAGAAACCGACCTGCAAAGGCAGCCGGCTGCTGCCTCCACACCGAGGGCTGTGCGGTCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR TCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGAGGAGGAGGCCTGGCTaGCTCGCTCCAAGAGGTCTC +
Preference number: 2 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMRRRPG*LAPRGL
Trigger: GAGACCTCTTGGAGCGAGTCAGCCAGGCCTCCTCCT...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CAA 90 bp GAATGGACGGCTGGGCTGGGCTGGTTACTTCTCACAATCTGGGCCTaGGCAGGCTGTAGCCTGAGCCCTTGCTGGGGAACTGCCACAGGG +
Preference number: 2 (lower is better)
Translates to: EWTAGLGWLLLTIWA*AGCSLSPCWGTATG
Trigger: CCCTGTGGCAGTTCCCCAGCAAGGGCTCAGGCTACAGCCTGCCAAGGCCCAGATTGTGAGAAGTAACCAGCCCAGCCCAGCCGTCCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR TCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCTACCCTGGTCTAGCTaGGAAGGCGTCGCTGATGCC +
Preference number: 2 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMLPWSS*EGVADA
Trigger: GGCATCAGCGACGCCTTCTCAGCTAGACCAGGGTAG...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR CCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCGAGAAACTGAAGTCCTaGCTCCCGGGAGGCCGCTTC +
Preference number: 2 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGEKLKS*LPGGRF
Trigger: GAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTC...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR CCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCTGAGGCAGGTTGCCTaGAGACGTGGGACTGAGGAC +
Preference number: 2 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMLRQVA*RRGTED
Trigger: GTCCTCAGTCCCACGTCTCCAGGCAACCTGCCTCAG...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR CCA 90 bp GCTCTGCACAGTGGCTCCACCAGCCCCATTGTGCTTGTGTCCAGGCCCCCAGCCTTCTTCAAAATGCAGTaGCTCCTCAGCGAGAGGCGG +
Preference number: 2 (lower is better)
Translates to: ALHSGSTSPIVLVSRPPAFFKMQ*LLSERR
Trigger: CCGCCTCTCGCTGAGGAGCCACTGCATTTTGAAGAA...GGCTGGGGGCCTGGACACAAGCACAATGGGGCTGGTGGAGCCACTGTGCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR CCA 90 bp GAGAAGCGAAGGCCTACACTTTGGGAATGCAGCAACGGCCTGGGAGTTGGCGGGCGGCGGTGGCTGCTGTaGCTGCTGCATCTGTCTACA +
Preference number: 2 (lower is better)
Translates to: EKRRPTLWECSNGLGVGGRRWLL*LLHLST
Trigger: TGTAGACAGATGCAGCAGCCACAGCAGCCACCGCCG...CCCGCCAACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGGCCTTCGCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CAA 90 bp GGTCAATCCTCCATGCTGACAGATGGCGCCTGCACTCAGGCTGGCTaGGACATGCTGCACCGGCCTTCCATCCCCTACGATTCCCCCAAT +
Preference number: 2 (lower is better)
Translates to: GQSSMLTDGACTQAG*DMLHRPSIPYDSPN
Trigger: ATTGGGGGAATCGTAGGGGATGGAAGGCCGGTGCAGCATGTCCAAGCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR TCA 90 bp AGAGGGGAAGGGGGAGGGCTTGGGTATTCTTTGCCCTGTCCTCCCACAGGAGGGACAGACAAGAGAAACTaGAGTCCTGGCTCCCGGGAG +
Preference number: 2 (lower is better)
Translates to: RGEGGGLGYSLPCPPTGGTDKRN*SPGSRE
Trigger: CTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGT...CCCTCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR CCA 90 bp CCTGGATCGGGTGGGCTCACTGGGGTAACCTCCTTGAGTTGGAGACACTGGCGAAGCCGGGGAAGTGTGTaGTGGGCTAGGCCTGTAATG +
Preference number: 2 (lower is better)
Translates to: PGSGGLTGVTSLSWRHWRSRGSV*WARPVM
Trigger: CATTACAGGCCTAGCCCACCACACACTTCCCCGGCT...TCGCCAGTGTCTCCAACTCAAGGAGGTTACCCCAGTGAGCCCACCCGATCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR CCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGACGGCTGGGCTGGGCTaGTTACTTCTCACAATCTGG +
Preference number: 2 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMTAGLG*LLLTIW
Trigger: CCAGATTGTGAGAAGTAACCAGCCCAGCCCAGCCGT...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CAA 90 bp TTGCACAACTGGCACAGATGCACGAAGACCCCTTCCAGGCCTCTGTaGCCTTCTCCTGAACCTCTGAGCCCGCTTGCCTGTTGCCCTGGA +
Preference number: 2 (lower is better)
Translates to: LHNWHRCTKTPSRPL*PSPEPLSPLACCPG
Trigger: TCCAGGGCAACAGGCAAGCGGGCTCAGAGGTTCAGGAGAAGGCAACAGAGGCCTGGAAGGGGTCTTCGTGCATCTGTGCCAGTTGTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR TCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCTCCGGCAACTGCTGCTaGGGCTGCGGTGGCGGCGGT +
Preference number: 2 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVSGNCC*GCGGGG
Trigger: ACCGCCGCCACCGCAGCCTCAGCAGCAGTTGCCGGA...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR TCA 90 bp CCTGGATCGGGTGGGCTCACTGGGGTAACCTCCTTGAGTTGGAGACACTGGCGATGGAGAAAGGGCAGGTaGGGTGGACTGATAGGTCTG +
Preference number: 2 (lower is better)
Translates to: PGSGGLTGVTSLSWRHWRWRKGR*GGLIGL
Trigger: CAGACCTATCAGTCCACCTCACCTGCCCTTTCTCCA...TCGCCAGTGTCTCCAACTCAAGGAGGTTACCCCAGTGAGCCCACCCGATCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CAA 90 bp GTGTGGTCCTGGATCGGGTGGGCTCACTGGGGTAACCTCCTTGAGTaGGAGACACTGGCGACAGCTCGTCACATGACCTCTCATATGCAG +
Preference number: 2 (lower is better)
Translates to: VWSWIGWAHWGNLLE*ETLATARHMTSHMQ
Trigger: CTGCATATGAGAGGTCATGTGACGAGCTGTCGCCAGTGTCTCCAACTCAAGGAGGTTACCCCAGTGAGCCCACCCGATCCAGGACCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR CCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGTCTCCATTTGCTGGATaGAAGAAGATGGCCGGAAGG +
Preference number: 2 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMSPFAG*KKMAGR
Trigger: CCTTCCGGCCATCTTCTTCCATCCAGCAAATGGAGA...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR TCA 90 bp CTGGTCAACCTTCTTCCAGCCTCTGCCTGGCTGAAGTCCAAAGCATGTAGTGTTCTGAGAAGGCGTCGCTaGTGCCCACCCTGGTCTAGC +
Preference number: 2 (lower is better)
Translates to: LVNLLPASAWLKSKACSVLRRRR*CPPWSS
Trigger: GCTAGACCAGGGTGGGCATCAGCGACGCCTTCTCAG...AACACTACATGCTTTGGACTTCAGCCAGGCAGAGGCTGGAAGAAGGTTGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR TCA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTAGCTGGAGATGTAGGCTaGGTCCCGATGCGGGGGAGA +
Preference number: 2 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLAGDVG*VPMRGR
Trigger: TCTCCCCCGCATCGGGACTCAGCCTACATCTCCAGC...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR TCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGTACGATTCCCCCAATTaGCCCTTGATAAACCAACCG +
Preference number: 2 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMYDSPN*PLINQP
Trigger: CGGTTGGTTTATCAAGGGTCAATTGGGGGAATCGTA...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR TCA 90 bp CCTGGATCGGGTGGGCTCACTGGGGTAACCTCCTTGAGTTGGAGACACTGGCGAAGGGCTGGCTGTTTTTaGCATGTTCCTACAATGCCT +
Preference number: 2 (lower is better)
Translates to: PGSGGLTGVTSLSWRHWRRAGCF*HVPTMP
Trigger: AGGCATTGTAGGAACATGTCAAAAACAGCCAGCCCT...TCGCCAGTGTCTCCAACTCAAGGAGGTTACCCCAGTGAGCCCACCCGATCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR TCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCACATTTCATCTTCCTaGTGTGAGAGAGAGGGGTAT +
Preference number: 2 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMHISSS*CEREGY
Trigger: ATACCCCTCTCTCTCACATCAGGAAGATGAAATGTG...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR GCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACGGTGGCGGCGGTGGCTaGTGTGGCTGCTGCATCTGT +
Preference number: 2 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHGGGGG*CGCCIC
Trigger: ACAGATGCAGCAGCCACAGCAGCCACCGCCGCCACC...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CAA 90 bp CATGTGGCCACAAGCATCTCAGGGTGGCTCACCTGCTGTGAGGCTTaGGACACCGAAATGAAGGTTACCAACACTTCAGCCCTTGAGTGG +
Preference number: 2 (lower is better)
Translates to: HVATSISGWLTCCEA*DTEMKVTNTSALEW
Trigger: CCACTCAAGGGCTGAAGTGTTGGTAACCTTCATTTCGGTGTCCAAAGCCTCACAGCAGGTGAGCCACCCTGAGATGCTTGTGGCCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CAA 90 bp CATCAGGGGAACCTAGTTGGCTGGAGGAGCGCTCCAGATCTAGTTTaGAGTGACAGACTGGGTAATAGGATGCTGACTGGCTGCGTCCGA +
Preference number: 2 (lower is better)
Translates to: HQGNLVGWRSAPDLV*SDRLGNRMLTGCVR
Trigger: TCGGACGCAGCCAGTCAGCATCCTATTACCCAGTCTGTCACTCAAAACTAGATCTGGAGCGCTCCTCCAGCCAACTAGGTTCCCCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CAA 90 bp GGAGGAGATACTATTGCTAGATGGAGAGAAGCGAAGGCCTACACTTaGGGAATGCAGCAACGGCCTGGGAGTTGGCGGGTGCGGTTTGAT +
Preference number: 2 (lower is better)
Translates to: GGDTIARWREAKAYT*GMQQRPGSWRVRFD
Trigger: ATCAAACCGCACCCGCCAACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGGCCTTCGCTTCTCTCCATCTAGCAATAGTATCTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR TCA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCAGGAGGGGCCACAGCATaGGAATGCGCTGCGGCTGGC +
Preference number: 2 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPGGATA*ECAAAG
Trigger: GCCAGCCGCAGCGCATTCTCATGCTGTGGCCCCTCC...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR GCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCCTGACAGATGGCGCCTaGACTCAGGCTGGCTTGGAC +
Preference number: 2 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVLTDGA*TQAGLD
Trigger: GTCCAAGCCAGCCTGAGTGCAGGCGCCATCTGTCAG...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR GCA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCGGGGATGTCTGCCCTTaGCGAGAGTCTCGGGACAGC +
Preference number: 2 (lower is better)
Translates to: TYQTHGTGRSQIFIQETAGDVCP*RESRDS
Trigger: GCTGTCCCGAGACTCTCGGCAAGGGCAGACATCCCC...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR CCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCGAGAAACTGAAGTCCTaGCTCCCGGGAGGCCGCTTC +
Preference number: 2 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVEKLKS*LPGGRF
Trigger: GAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTC...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR CCA 90 bp ATCCTCTTTGGTCAATCCTCCATGCTGACAGATGGCGCCTGCACTCAGGCTGGCGAGAGAGCATGTGGCTaGGCACAGACAAGAGAAACT +
Preference number: 2 (lower is better)
Translates to: ILFGQSSMLTDGACTQAGERACG*AQTRET
Trigger: AGTTTCTCTTGTCTGTGCCCAGCCACATGCTCTCTC...GCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAGAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR CCA 90 bp CTGGTCAACCTTCTTCCAGCCTCTGCCTGGCTGAAGTCCAAAGCATGTAGTGTTCTGCGGCTGGCTGTGTaGGTGACACTGGCTAAGGAT +
Preference number: 2 (lower is better)
Translates to: LVNLLPASAWLKSKACSVLRLAV*VTLAKD
Trigger: ATCCTTAGCCAGTGTCACCCACACAGCCAGCCGCAG...AACACTACATGCTTTGGACTTCAGCCAGGCAGAGGCTGGAAGAAGGTTGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR CCA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCACGGGGGAGAGGAGGGTaGGCTCTGGATGACCGGGAG +
Preference number: 2 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPRGRGG*ALDDRE
Trigger: CTCCCGGTCATCCAGAGCCCACCCTCCTCTCCCCCG...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CAA 90 bp GCCAGCCACCTTTTCTTGGGAGCAGCCAGAGCTGAGTTCAAGGCATaGCATGGTGAAGGGTTCCATGACACGTCTTTGCAGGTAGCTCTT +
Preference number: 2 (lower is better)
Translates to: ASHLFLGAARAEFKA*HGEGFHDTSLQVAL
Trigger: AAGAGCTACCTGCAAAGACGTGTCATGGAACCCTTCACCATGCAATGCCTTGAACTCAGCTCTGGCTGCTCCCAAGAAAAGGTGGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CAA 90 bp GATGGCCGGAAGGTCGGAGTTAGGTTGGAGGTGGAGGAGATACTATaGCTAGATGGAGAGAAGCGAAGGCCTACACTTTGGGAATGCAGC +
Preference number: 2 (lower is better)
Translates to: DGRKVGVRLEVEEIL*LDGEKRRPTLWECS
Trigger: GCTGCATTCCCAAAGTGTAGGCCTTCGCTTCTCTCCATCTAGCAATAGTATCTCCTCCACCTCCAACCTAACTCCGACCTTCCGGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR TCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGCTCCTCGTTGGCATCTaGAGAGAGGGAGAGAGCATG +
Preference number: 2 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGLLVGI*REGESM
Trigger: CATGCTCTCTCCCTCTCTTCAGATGCCAACGAGGAG...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR TCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCCCTATAGCCTTTCACTaGGAATCCAGAACAATCTTT +
Preference number: 2 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGPIAFH*ESRTIF
Trigger: AAAGATTGTTCTGGATTCTCAGTGAAAGGCTATAGG...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR TCA 90 bp GAGAAGCGAAGGCCTACACTTTGGGAATGCAGCAACGGCCTGGGAGTTGGCGGGCCTTTTAGTGGAGTATaGCACTCAGTGATGTATCAG +
Preference number: 2 (lower is better)
Translates to: EKRRPTLWECSNGLGVGGPFSGV*HSVMYQ
Trigger: CTGATACATCACTGAGTGTCATACTCCACTAAAAGG...CCCGCCAACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGGCCTTCGCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR TCA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTACATTTCCTCCCACCTaGAGCCAGACATGGACTCAG +
Preference number: 2 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPTFPPT*SQTWTQ
Trigger: CTGAGTCCATGTCTGGCTTCAGGTGGGAGGAAATGT...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR TCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCCCAACCGGCTCTGGCTaGCTCCTATGTCTCCTTGTG +
Preference number: 2 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVPTGSG*LLCLLV
Trigger: CACAAGGAGACATAGGAGTCAGCCAGAGCCGGTTGG...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR TCA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTGGAGACGTGGGACTaGGGACGGTGTCCACAGATG +
Preference number: 2 (lower is better)
Translates to: TYQTHGTGRSQIFIQETALETWD*GRCPQM
Trigger: CATCTGTGGACACCGTCCTCAGTCCCACGTCTCCAG...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR GCA 90 bp AAACAATTTCTGTATGACACCATCTGGGTTTACAGGAAGAGGGCCACTAGAACATGCAGACCTGGTGGCTaGAGGGCGCTGGCGGTCTGG +
Preference number: 2 (lower is better)
Translates to: KQFLYDTIWVYRKRATRTCRPGG*RALAVW
Trigger: CCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCA...TGTTCTAGTGGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAGAAATTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR GCA 90 bp TCCTGGCCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTGGTGGCTGCTGTGGCTaGTGCATCTGTCTACACTCT +
Preference number: 2 (lower is better)
Translates to: SWPVLGLGVERSVYFAESGGCCG*CICLHS
Trigger: AGAGTGTAGACAGATGCAGCAGCCACAGCAGCCACC...AGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGGCCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR CCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCTGCAGTGAAAACATATaGGTCTCACTCCAACAAAAC +
Preference number: 2 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAACSENI*VSLQQN
Trigger: GTTTTGTTGGAGTGAGACCCATATGTTTTCACTGCA...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR CCA 90 bp AGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGTGCAGTGAAAACATATaGGTCTCACTCCAACAAAAC +
Preference number: 2 (lower is better)
Translates to: SPGSREAASQSAACKGFQCSENI*VSLQQN
Trigger: GTTTTGTTGGAGTGAGACCCATATGTTTTCACTGCA...CTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR CCA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCAGGTCCGATTCTGCTaGTGGAGGTGGGGGTACTGC +
Preference number: 2 (lower is better)
Translates to: TYQTHGTGRSQIFIQETAQVRFC*WRWGYC
Trigger: GCAGTACCCCCACCTCCACCAGCAGAATCGGACCTG...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR TCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCACAGACAAGAGAAACTaGAGTCCTGGCTCCCGGGAG +
Preference number: 2 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVTDKRN*SPGSRE
Trigger: CTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGT...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR TCA 90 bp TCCTGGCCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAGATGCCAGCAGTGCTaGGACCTGGCCAAAAAGCAA +
Preference number: 2 (lower is better)
Translates to: SWPVLGLGVERSVYFAESRCQQC*DLAKKQ
Trigger: TTGCTTTTTGGCCAGGTCTCAGCACTGCTGGCATCT...AGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGGCCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR TCA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCATGGCAGGCTGTAGCCTaGGCCCTTGCTGGGGAACTG +
Preference number: 2 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPWQAVA*ALAGEL
Trigger: CAGTTCCCCAGCAAGGGCTCAGGCTACAGCCTGCCA...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR GCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGCGCTTCCCAGTCGGCTaGATGCAAAGGATTTCAGCA +
Preference number: 2 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGRFPVG*MQRISA
Trigger: TGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCG...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR GCA 90 bp CTGGTCAACCTTCTTCCAGCCTCTGCCTGGCTGAAGTCCAAAGCATGTAGTGTTAATCCTAATGCACACTaGAGACCTGGTGGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: LVNLLPASAWLKSKACSVNPNAH*RPGGCR
Trigger: CCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGATT...AACACTACATGCTTTGGACTTCAGCCAGGCAGAGGCTGGAAGAAGGTTGACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR CCA 90 bp GAGAAGCGAAGGCCTACACTTTGGGAATGCAGCAACGGCCTGGGAGTTGGCGGGTGCAGTGAAAACATATaGGTCTCACTCCAACAAAAC +
Preference number: 2 (lower is better)
Translates to: EKRRPTLWECSNGLGVGGCSENI*VSLQQN
Trigger: GTTTTGTTGGAGTGAGACCCATATGTTTTCACTGCA...CCCGCCAACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGGCCTTCGCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR CCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCGAGAAACTGAAGTCCTaGCTCCCGGGAGGCCGCTTC +
Preference number: 2 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLEKLKS*LPGGRF
Trigger: GAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTC...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR CCA 90 bp TCCTGGCCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAATGGACGGCTGGGCTaGGCTGGTTACTTCTCACAA +
Preference number: 2 (lower is better)
Translates to: SWPVLGLGVERSVYFAESNGRLG*AGYFSQ
Trigger: TTGTGAGAAGTAACCAGCCCAGCCCAGCCGTCCATT...AGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGGCCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CAA 90 bp AGCAACGGCCTGGGAGTTGGCGGGTGCGGTTTGATTTCGTTAGGGTaGACACTGATAGGTCTTCTGATTAAATGCGACACATCAGGGGAA +
Preference number: 2 (lower is better)
Translates to: SNGLGVGGCGLISLG*TLIGLLIKCDTSGE
Trigger: TTCCCCTGATGTGTCGCATTTAATCAGAAGACCTATCAGTGTCAACCCTAACGAAATCAAACCGCACCCGCCAACTCCCAGGCCGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR TCA 90 bp CCCCACTGCACGGCTTCACAACTGTGTGGTGTTCAATATATCAGGAGAGAGAACGGGAAGGGGCAGCTCTaGAATACAGTACTCGGATCA +
Preference number: 2 (lower is better)
Translates to: PHCTASQLCGVQYIRRENGKGQL*NTVLGS
Trigger: TGATCCGAGTACTGTATTTCAGAGCTGCCCCTTCCC...GTTCTCTCTCCTGATATATTGAACACCACACAGTTGTGAAGCCGTGCAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR GCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCAATCCTAATGCACACTaGAGACCTGGTGGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVNPNAH*RPGGCR
Trigger: CCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGATT...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR GCA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTGTGGCTCAGGTTCTaGTTCTTCCGGCAACTGCTG +
Preference number: 2 (lower is better)
Translates to: TYQTHGTGRSQIFIQETALWLRF*FFRQLL
Trigger: CAGCAGTTGCCGGAAGAAGCAGAACCTGAGCCACAG...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR GCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTATGTAGCCTGAGCCCTTaGTGGGGAACTGCCACAGGG +
Preference number: 2 (lower is better)
Translates to: PVLGLGVERSVYFAESKLCSLSP*WGTATG
Trigger: CCCTGTGGCAGTTCCCCAGCAAGGGCTCAGGCTACA...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR CCA 90 bp ACTTACTTACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAGGCCACTGGGCTCCTaGCTAGAGGTTGCCGCTAGA +
Preference number: 2 (lower is better)
Translates to: TYLLTRHMGLVAARFLFRRPLGS*LEVAAR
Trigger: TCTAGCGGCAACCTCTAGCCAGGAGCCCAGTGGCCT...CCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGTAAGTAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR CCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAGGCCGGGCCTCTGTCTaGAGGCCAATGGAAACATTT +
Preference number: 2 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLGRASV*RPMETF
Trigger: AAATGTTTCCATTGGCCTCCAGACAGAGGCCCGGCC...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CAA 90 bp ACACTTTGGGAATGCAGCAACGGCCTGGGAGTTGGCGGGTGCGGTTaGATTTCGTTAGGGTTGACACTGATAGGTCTTCTGATTAAATGC +
Preference number: 2 (lower is better)
Translates to: TLWECSNGLGVGGCG*ISLGLTLIGLLIKC
Trigger: GCATTTAATCAGAAGACCTATCAGTGTCAACCCTAACGAAATCAAACCGCACCCGCCAACTCCCAGGCCGTTGCTGCATTCCCAAAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR TCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTAATGGAGAGAGGACGCTaGTGCCTACCCTGGTCTAGC +
Preference number: 2 (lower is better)
Translates to: PVLGLGVERSVYFAESKLMERGR*CLPWSS
Trigger: GCTAGACCAGGGTAGGCATCAGCGTCCTCTCTCCAT...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR GCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTCGCTTCCCAGTCGGCTaGATGCAAAGGATTTCAGCA +
Preference number: 2 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPRFPVG*MQRISA
Trigger: TGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCG...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR GCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTACCAGTGCCAGGCCTGTaGCGAGGCTTTGGTTCCAAT +
Preference number: 2 (lower is better)
Translates to: PVLGLGVERSVYFAESKLPVPGL*RGFGSN
Trigger: ATTGGAACCAAAGCCTCGGCACAGGCCTGGCACTGG...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR GCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGAGCCCGCTTGCCTGTTaGCCTGGAAGCAGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQSPLAC*PGSSSS
Trigger: AGAGGAGCTGCTTCCAGGGCAACAGGCAAGCGGGCT...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR GCA 90 bp AAACAATTTCTGTATGACACCATCTGGGTTTACAGGAAGAGGGCCACTAGAACACCCTTGCTGGGGAACTaGCACAGGGAGCTGAGGCAT +
Preference number: 2 (lower is better)
Translates to: KQFLYDTIWVYRKRATRTPLLGN*HRELRH
Trigger: ATGCCTCAGCTCCCTGTGGCAGTTCCCCAGCAAGGG...TGTTCTAGTGGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAGAAATTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR CCA 90 bp TCTCCTGCCCCAACAAGCTCTGGTTGGCATATTCTAGTCAAAAACAACTGGCATGAGGGAGAGAGCATGTaGCTGGGCACAGACAAGAGA +
Preference number: 2 (lower is better)
Translates to: SPAPTSSGWHILVKNNWHEGESM*LGTDKR
Trigger: TCTCTTGTCTGTGCCCAGCCACATGCTCTCTCCCTC...ATGCCAGTTGTTTTTGACTAGAATATGCCAACCAGAGCTTGTTGGGGCAGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR CCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGCGAAAATCTCCTCGTTaGCATCTGAAGAGAGGGAGA +
Preference number: 2 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGRKSPR*HLKRGR
Trigger: TCTCCCTCTCTTCAGATGCCAACGAGGAGATTTTCG...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR TCA 90 bp AAACAATTTCTGTATGACACCATCTGGGTTTACAGGAAGAGGGCCACTAGAACAGTCAATCCTCCATGCTaGCAGATGGCGCCTGCACTC +
Preference number: 2 (lower is better)
Translates to: KQFLYDTIWVYRKRATRTVNPPC*QMAPAL
Trigger: GAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGAC...TGTTCTAGTGGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAGAAATTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR TCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGGACGGTGTCCACAGATaGCACTGCCCAGGTCCGATT +
Preference number: 2 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQDGVHR*HCPGPI
Trigger: AATCGGACCTGGGCAGTGTCATCTGTGGACACCGTC...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR GCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTTCCCAGTCGGCTGCATaGAAAGGATTTCAGCATGTG +
Preference number: 2 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPSQSAA*KGFQHV
Trigger: CACATGCTGAAATCCTTTGCATGCAGCCGACTGGGA...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR GCA 90 bp ATCCTCTTTGGTCAATCCTCCATGCTGACAGATGGCGCCTGCACTCAGGCTGGCGACATGTTCCTACAATaGCTCTTGGAAAATCAATGT +
Preference number: 2 (lower is better)
Translates to: ILFGQSSMLTDGACTQAGDMFLQ*LLENQC
Trigger: ACATTGATTTTCCAAGAGGCATTGTAGGAACATGTC...GCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR CCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGGATTTCAGCATGTaGGCTGCCACCTCTGAACAC +
Preference number: 2 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLKDFSM*AATSEH
Trigger: GTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTT...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR CCA 90 bp TCTCCTGCCCCAACAAGCTCTGGTTGGCATATTCTAGTCAAAAACAACTGGCATGGGCATGACCCTGGGTaGAAATATTGGGACTCAGTC +
Preference number: 2 (lower is better)
Translates to: SPAPTSSGWHILVKNNWHGHDPG*KYWDSV
Trigger: GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCC...ATGCCAGTTGTTTTTGACTAGAATATGCCAACCAGAGCTTGTTGGGGCAGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR CCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTAACAGGTGAGTGCGGGTaGTGTGTGGCGTTCCAAATG +
Preference number: 2 (lower is better)
Translates to: PVLGLGVERSVYFAESKLTGECG*CVAFQM
Trigger: CATTTGGAACGCCACACACCACCCGCACTCACCTGT...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR CCA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCGCCGCTGGGCCATTTTaGATAATGGAGATTTGGGTC +
Preference number: 2 (lower is better)
Translates to: TYQTHGTGRSQIFIQETAAAGPF*IMEIWV
Trigger: GACCCAAATCTCCATTATCCAAAATGGCCCAGCGGC...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR CCA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCTTACTTCTCACAATCTaGGCCTTGGCAGGCTGTAGC +
Preference number: 2 (lower is better)
Translates to: TYQTHGTGRSQIFIQETALLLTI*ALAGCS
Trigger: GCTACAGCCTGCCAAGGCCCAGATTGTGAGAAGTAA...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR TCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCCACATTTCATCTTCCTaGTGTGAGAGAGAGGGGTAT +
Preference number: 2 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVHISSS*CEREGY
Trigger: ATACCCCTCTCTCTCACATCAGGAAGATGAAATGTG...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR TCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCACCTACTCCCTCTTATaGTGGCCAAAAAGAATGGCA +
Preference number: 2 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVTYSLL*WPKRMA
Trigger: TGCCATTCTTTTTGGCCATCATAAGAGGGAGTAGGT...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR GCA 90 bp TCCTGGCCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTTTAATAGTGCACGTCTaGAACCCGGACAAGATACAA +
Preference number: 2 (lower is better)
Translates to: SWPVLGLGVERSVYFAESLIVHV*NPDKIQ
Trigger: TTGTATCTTGTCCGGGTTGCAGACGTGCACTATTAA...AGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGGCCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR CCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGGAACTACCTCGAATGTaGAAACCAAGCCTGAAAATG +
Preference number: 2 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGELPRM*KPSLKM
Trigger: CATTTTCAGGCTTGGTTTCCACATTCGAGGTAGTTC...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR CCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTACGAAAATCTCCTCGTTaGCATCTGAAGAGAGGGAGA +
Preference number: 2 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLRKSPR*HLKRGR
Trigger: TCTCCCTCTCTTCAGATGCCAACGAGGAGATTTTCG...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR CCA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCCAGACACATGGGACTaGTCGCAGCCAGATTTTTAT +
Preference number: 2 (lower is better)
Translates to: TYQTHGTGRSQIFIQETAPDTWD*SQPDFY
Trigger: ATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGG...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR TCA 90 bp CAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGCATTTCTGCAGTAGAAAAATAATGGAGAGAGGACGCTaGTGCCTACCCTGGTCTAGC +
Preference number: 2 (lower is better)
Translates to: QRFSEHWFCPRHFCSRKIMERGR*CLPWSS
Trigger: GCTAGACCAGGGTAGGCATCAGCGTCCTCTCTCCAT...TATTTTTCTACTGCAGAAATGCCTTGGACAAAACCAGTGCTCACTGAATCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CAA 90 bp GCTATTTGCTTTCAGCACAGAGACAAGTCCTGGCCTGTTTTAGGTTaGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTAGTA +
Preference number: 2 (lower is better)
Translates to: AICFQHRDKSWPVLG*GVERSVYFAESKLV
Trigger: TACTAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGGCCAGGACTTGTCTCTGTGCTGAAAGCAAATAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR TCA 90 bp GCGAGAAGGGTTTGTGCTCTATTAACTTGGGACTTTAATAGTGCACGTCTGCAAAGGGCTGGCTGTTTTTaGCATGTTCCTACAATGCCT +
Preference number: 2 (lower is better)
Translates to: ARRVCALLTWDFNSARLQRAGCF*HVPTMP
Trigger: AGGCATTGTAGGAACATGTCAAAAACAGCCAGCCCT...TTGCAGACGTGCACTATTAAAGTCCCAAGTTAATAGAGCACAAACCCTTCTCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR GCA 90 bp CTGGTCAACCTTCTTCCAGCCTCTGCCTGGCTGAAGTCCAAAGCATGTAGTGTTAGACAAGAGCGGTTCTaGTATTTTCTAATGAAGACA +
Preference number: 2 (lower is better)
Translates to: LVNLLPASAWLKSKACSVRQERF*YFLMKT
Trigger: TGTCTTCATTAGAAAATAGCAGAACCGCTCTTGTCT...AACACTACATGCTTTGGACTTCAGCCAGGCAGAGGCTGGAAGAAGGTTGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR GCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTAAGTGGGATCTCCATTTaGTGGATGGAAGAAGATGGC +
Preference number: 2 (lower is better)
Translates to: PVLGLGVERSVYFAESKLSGISI*WMEEDG
Trigger: GCCATCTTCTTCCATCCAGCAAATGGAGATCCCACT...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR CCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTACTGTCTGGAGGCCAATaGAAACATTTTCAACATCCT +
Preference number: 2 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLLSGGQ*KHFQHP
Trigger: AGGATGTTGAAAATGTTTCCATTGGCCTCCAGACAG...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR TCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGGGTCTTTCTTCACCCTaGAACAGTTTTTGCTGCGTC +
Preference number: 2 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQGLSSP*NSFCCV
Trigger: GACGCAGCAAAAACTGTTTCAGGGTGAAGAAAGACC...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR TCA 90 bp AAACAATTTCTGTATGACACCATCTGGGTTTACAGGAAGAGGGCCACTAGAACAGCTAGGCCTGTAATGTaGGTTCTGATGAGTTGGAGA +
Preference number: 2 (lower is better)
Translates to: KQFLYDTIWVYRKRATRTARPVM*VLMSWR
Trigger: TCTCCAACTCATCAGAACTCACATTACAGGCCTAGC...TGTTCTAGTGGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAGAAATTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR GCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTAGAGTATATGTCTTCATaGTGTGGCTCAGGTTCTGCT +
Preference number: 2 (lower is better)
Translates to: PVLGLGVERSVYFAESKLEYMSS*CGSGSA
Trigger: AGCAGAACCTGAGCCACAGCATGAAGACATATACTC...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR CCA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCAAAAGCGATTGTCTCCTaGAAAAAGCTGACCAGTGTG +
Preference number: 2 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPKAIVS*KKLTSV
Trigger: CACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR CCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTAAAAGCGATTGTCTCCTaGAAAAAGCTGACCAGTGTG +
Preference number: 2 (lower is better)
Translates to: PVLGLGVERSVYFAESKLKAIVS*KKLTSV
Trigger: CACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR GCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGTCCCAGTCGGCTGCATaGAAAGGATTTCAGCATGTG +
Preference number: 2 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWSQSAA*KGFQHV
Trigger: CACATGCTGAAATCCTTTGCATGCAGCCGACTGGGA...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR CCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGGAGAGAGCATGTGGCTaGGCACAGACAAGAGAAACT +
Preference number: 2 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWERACG*AQTRET
Trigger: AGTTTCTCTTGTCTGTGCCCAGCCACATGCTCTCTC...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR CCA 90 bp ACTTACTTACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGATATGCAGGTTTCAGTaGGATCTCCATTTGCTGGAT +
Preference number: 2 (lower is better)
Translates to: TYLLTRHMGLVAARFLFRICRFQ*DLHLLD
Trigger: ATCCAGCAAATGGAGATCCCACTGAAACCTGCATAT...CCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGTAAGTAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR TCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTACACACAGAAACTACATaGGAAATTAAGCCAGAGAAC +
Preference number: 2 (lower is better)
Translates to: PVLGLGVERSVYFAESKLHTETT*EIKPEN
Trigger: GTTCTCTGGCTTAATTTCTCATGTAGTTTCTGTGTG...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR TCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTATCTAATTTCCTTGGCTaGCTGCAATATTTAAAGGGC +
Preference number: 2 (lower is better)
Translates to: PVLGLGVERSVYFAESKLSNFLG*LQYLKG
Trigger: GCCCTTTAAATATTGCAGTCAGCCAAGGAAATTAGA...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR TCA 90 bp ACTTACTTACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGTCTAATTTCCTTGGCTaGCTGCAATATTTAAAGGGC +
Preference number: 2 (lower is better)
Translates to: TYLLTRHMGLVAARFLFRSNFLG*LQYLKG
Trigger: GCCCTTTAAATATTGCAGTCAGCCAAGGAAATTAGA...CCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGTAAGTAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR GCA 90 bp CAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGCATTTCTGCAGTAGAAAAATAGATGCCGCTGTTCTTTaGTACAAAACAAGCGCAGTG +
Preference number: 2 (lower is better)
Translates to: QRFSEHWFCPRHFCSRKIDAAVL*YKTSAV
Trigger: CACTGCGCTTGTTTTGTAGCAAAGAACAGCGGCATC...TATTTTTCTACTGCAGAAATGCCTTGGACAAAACCAGTGCTCACTGAATCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR CCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAGAGAGAGCATGTGGCTaGGCACAGACAAGAGAAACT +
Preference number: 2 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKERACG*AQTRET
Trigger: AGTTTCTCTTGTCTGTGCCCAGCCACATGCTCTCTC...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR TCA 90 bp GTACTAATTAAAATCATCTTGGATTTGGAGGAGACAGAACAGAGACAAAGATGCTTTAGTTGTAAGAGCTaGTGTACAGCCAGTGCCAGG +
Preference number: 2 (lower is better)
Translates to: VLIKIILDLEETEQRQRCFSCKS*CTASAR
Trigger: CCTGGCACTGGCTGTACATCAGCTCTTACAACTAAA...GCATCTTTGTCTCTGTTCTGTCTCCTCCAAATCCAAGATGATTTTAATTAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR GCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGACAACAGAGAACGAATaGTCCTTTGTTTCGTTTCAG +
Preference number: 2 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQTTENE*SFVSFQ
Trigger: CTGAAACGAAACAAAGGAGCATTCGTTCTCTGTTGT...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR CCA 90 bp GCGAGAAGGGTTTGTGCTCTATTAACTTGGGACTTTAATAGTGCACGTCTGCAATCCTACAATGCCTCTTaGAAAATCAATGTAGTGACA +
Preference number: 2 (lower is better)
Translates to: ARRVCALLTWDFNSARLQSYNAS*KINVVT
Trigger: TGTCACTACATTGATTTTCCAAGAGGCATTGTAGGA...TTGCAGACGTGCACTATTAAAGTCCCAAGTTAATAGAGCACAAACCCTTCTCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR CCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGGAACTACCTCGAATGTaGAAACCAAGCCTGAAAATG +
Preference number: 2 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWELPRM*KPSLKM
Trigger: CATTTTCAGGCTTGGTTTCCACATTCGAGGTAGTTC...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR TCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAACACACAGAAACTACATaGGAAATTAAGCCAGAGAAC +
Preference number: 2 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKHTETT*EIKPEN
Trigger: GTTCTCTGGCTTAATTTCTCATGTAGTTTCTGTGTG...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR TCA 90 bp GTACTAATTAAAATCATCTTGGATTTGGAGGAGACAGAACAGAGACAAAGATGCAATGAGATGATGGGGTaGGGAAACATGAAAGTAACA +
Preference number: 2 (lower is better)
Translates to: VLIKIILDLEETEQRQRCNEMMG*GNMKVT
Trigger: TGTTACTTTCATGTTTCCTCACCCCATCATCTCATT...GCATCTTTGTCTCTGTTCTGTCTCCTCCAAATCCAAGATGATTTTAATTAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR CCA 90 bp GTACTAATTAAAATCATCTTGGATTTGGAGGAGACAGAACAGAGACAAAGATGCACAGCAGATACAAAATaGTCTCCATTTTGTCATGCC +
Preference number: 2 (lower is better)
Translates to: VLIKIILDLEETEQRQRCTADTK*SPFCHA
Trigger: GGCATGACAAAATGGAGACCATTTTGTATCTGCTGT...GCATCTTTGTCTCTGTTCTGTCTCCTCCAAATCCAAGATGATTTTAATTAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CAA 90 bp CAACTGTGTGGTGTTCAATATATCAGGAGAGAGAACAAACATGCATaGGATAATATACTGTACAGAGAAAGTCCTTTACATCTGAGTCAT +
Preference number: 2 (lower is better)
Translates to: QLCGVQYIRRENKHA*DNILYRESPLHLSH
Trigger: ATGACTCAGATGTAAAGGACTTTCTCTGTACAGTATATTATCCAATGCATGTTTGTTCTCTCTCCTGATATATTGAACACCACACAGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CAA 90 bp TTAGGAAAAGTGTTTAATAATCCAGGCTTAACTACATTAGCAAACTaGTATATCTGGACAACGACCTGGGGTACTGTACATGATTCTAAT +
Preference number: 2 (lower is better)
Translates to: LGKVFNNPGLTTLAN*YIWTTTWGTVHDSN
Trigger: ATTAGAATCATGTACAGTACCCCAGGTCGTTGTCCAGATATACAAGTTTGCTAATGTAGTTAAGCCTGGATTATTAAACACTTTTCCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CCA 72 bp GGCGCTGGCCTGATCTCTACGCGTCCAGCGGCAGCCTaGCAAGTCAGCTCAGCGTCGGTATCAGAGTCAGCA +
Preference number: 3 (lower is better)
Translates to: GAGLISTRPAAA*QVSSASVSESA
Trigger: TGCTGACTCTGATACCGACGCTGAGCTGACTTGCCAGGCTGCCGCTGGACGCGTAGAGATCAGGCCAGCGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR TCA 72 bp ACTCAGGCTGAGGCAGGTTGCCTGGAGACGTGGGACTaGGGACGGTGTCCACAGATGACACTGCCCAGGTCC +
Preference number: 3 (lower is better)
Translates to: TQAEAGCLETWD*GRCPQMTLPRS
Trigger: GGACCTGGGCAGTGTCATCTGTGGACACCGTCCTCAGTCCCACGTCTCCAGGCAACCTGCCTCAGCCTGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR GCA 72 bp AAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTaGATGCAAAGGATTTCAGCATGTGGGCTGCCACCT +
Preference number: 3 (lower is better)
Translates to: KSWLPGGRFPVG*MQRISACGLPP
Trigger: AGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR CCA 72 bp CATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTaGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATG +
Preference number: 3 (lower is better)
Translates to: HVAGHRQEKLKS*LPGGRFPVGCM
Trigger: CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR TCA 72 bp GTAGGTCTACCTGGAAAAATGAGCGCGGCGCTGGCCTaGTCTCTACGCGTCCAGCGGCAGCCTGGCAAGTCA +
Preference number: 3 (lower is better)
Translates to: VGLPGKMSAALA*SLRVQRQPGKS
Trigger: TGACTTGCCAGGCTGCCGCTGGACGCGTAGAGATCAGGCCAGCGCCGCGCTCATTTTTCCAGGTAGACCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR GCA 72 bp CCCCCTAGGAAGACCAGCAATAATCCTAATGCACACTaGAGACCTGGTGGCTGCAGGGCGCTGGCGGTCTGG +
Preference number: 3 (lower is better)
Translates to: PPRKTSNNPNAH*RPGGCRALAVW
Trigger: CCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGATTATTGCTGGTCTTCCTAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR GCA 72 bp CAGATGGCGCCTGCACTCAGGCTGGCTTGGACATGCTaGACCGGCCTTCCATCCCCTACGATTCCCCCAATT +
Preference number: 3 (lower is better)
Translates to: QMAPALRLAWTC*TGLPSPTIPPI
Trigger: AATTGGGGGAATCGTAGGGGATGGAAGGCCGGTGCAGCATGTCCAAGCCAGCCTGAGTGCAGGCGCCATCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CCA 72 bp ATCCTCCATGCTGACAGATGGCGCCTGCACTCAGGCTaGCTTGGACATGCTGCACCGGCCTTCCATCCCCTA +
Preference number: 3 (lower is better)
Translates to: ILHADRWRLHSG*LGHAAPAFHPL
Trigger: TAGGGGATGGAAGGCCGGTGCAGCATGTCCAAGCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR TCA 72 bp TACTTCTCACAATCTGGGCCTTGGCAGGCTGTAGCCTaGGCCCTTGCTGGGGAACTGCCACAGGGAGCTGAG +
Preference number: 3 (lower is better)
Translates to: YFSQSGPWQAVA*ALAGELPQGAE
Trigger: CTCAGCTCCCTGTGGCAGTTCCCCAGCAAGGGCTCAGGCTACAGCCTGCCAAGGCCCAGATTGTGAGAAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR TCA 72 bp CGGGACAGCTGCCTGTACAGGTTGTCCTGGTATGCCTaGGCCACAGGTAGAGTCCGAGCTACCTTCACGTCG +
Preference number: 3 (lower is better)
Translates to: RDSCLYRLSWYA*ATGRVRATFTS
Trigger: CGACGTGAAGGTAGCTCGGACTCTACCTGTGGCTCAGGCATACCAGGACAACCTGTACAGGCAGCTGTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR GCA 72 bp CTCTTTGGTCAATCCTCCATGCTGACAGATGGCGCCTaGACTCAGGCTGGCTTGGACATGCTGCACCGGCCT +
Preference number: 3 (lower is better)
Translates to: LFGQSSMLTDGA*TQAGLDMLHRP
Trigger: AGGCCGGTGCAGCATGTCCAAGCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR CAA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGGTTGGCGGGTGCGGTTaGATTTCGTTAGGGTTGACA +
Preference number: 3 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMVGGCG*ISLGLT
Trigger: TGTCAACCCTAACGAAATCAAACCGCACCCGCCAAC...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR TCA 72 bp CACAGCATGAGAATGCGCTGCGGCTGGCTGTGTGGGTaGCACTGGCTAAGGATGCAAAGGCAAAGGGGCATC +
Preference number: 3 (lower is better)
Translates to: HSMRMRCGWLCG*HWLRMQRQRGI
Trigger: GATGCCCCTTTGCCTTTGCATCCTTAGCCAGTGTCACCCACACAGCCAGCCGCAGCGCATTCTCATGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR TCA 72 bp CTGCACCGGCCTTCCATCCCCTACGATTCCCCCAATTaGCCCTTGATAAACCAACCGGCTCTGGCTGACTCC +
Preference number: 3 (lower is better)
Translates to: LHRPSIPYDSPN*PLINQPALADS
Trigger: GGAGTCAGCCAGAGCCGGTTGGTTTATCAAGGGTCAATTGGGGGAATCGTAGGGGATGGAAGGCCGGTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR TCA 72 bp TTGCTGATGGATGATGGTGGACTGAAGGACTCAGGCTaGGGCAGGTTGCCTGGAGACGTGGGACTGAGGACG +
Preference number: 3 (lower is better)
Translates to: LLMDDGGLKDSG*GRLPGDVGLRT
Trigger: CGTCCTCAGTCCCACGTCTCCAGGCAACCTGCCTCAGCCTGAGTCCTTCAGTCCACCATCATCCATCAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR GCA 72 bp CTAGATGGAGAGAAGCGAAGGCCTACACTTTGGGAATaGAGCAACGGCCTGGGAGTTGGCGGGTGCGGTTTG +
Preference number: 3 (lower is better)
Translates to: LDGEKRRPTLWE*SNGLGVGGCGL
Trigger: CAAACCGCACCCGCCAACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGGCCTTCGCTTCTCTCCATCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CCA 72 bp AGGACCTGCTCATTCGCCTGGACAGGTGAGTGCGGGTaGTGTGTGGCGTTCCAAATGAGCAGGAGCACTTTC +
Preference number: 3 (lower is better)
Translates to: RTCSFAWTGECG*CVAFQMSRSTF
Trigger: GAAAGTGCTCCTGCTCATTTGGAACGCCACACACCACCCGCACTCACCTGTCCAGGCGAATGAGCAGGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CCA 72 bp GACTGTGGCCACCATGTGGCCACAAGCATCTCAGGGTaGCTCACCTGCTGTGAGGCTTTGGACACCGAAATG +
Preference number: 3 (lower is better)
Translates to: DCGHHVATSISG*LTCCEALDTEM
Trigger: CATTTCGGTGTCCAAAGCCTCACAGCAGGTGAGCCACCCTGAGATGCTTGTGGCCACATGGTGGCCACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CCA 72 bp GGGATCTATAGACACTCATACTTTCAGCTGGAGGGCTaGCCCGATACTGAGGGCCTCTCCGGAGAGGGGAAG +
Preference number: 3 (lower is better)
Translates to: GIYRHSYFQLEG*PDTEGLSGEGK
Trigger: CTTCCCCTCTCCGGAGAGGCCCTCAGTATCGGGCCAGCCCTCCAGCTGAAAGTATGAGTGTCTATAGATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR TCA 72 bp GTAAAGCTACAGGACCTGCTCATTCGCCTGGACAGGTaGGTGCGGGTGGTGTGTGGCGTTCCAAATGAGCAG +
Preference number: 3 (lower is better)
Translates to: VKLQDLLIRLDR*VRVVCGVPNEQ
Trigger: CTGCTCATTTGGAACGCCACACACCACCCGCACTCACCTGTCCAGGCGAATGAGCAGGTCCTGTAGCTTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR TCA 72 bp CGCTGTGGAAGATCCTCTTTGGTCAATCCTCCATGCTaGCAGATGGCGCCTGCACTCAGGCTGGCTTGGACA +
Preference number: 3 (lower is better)
Translates to: RCGRSSLVNPPC*QMAPALRLAWT
Trigger: TGTCCAAGCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAGAGGATCTTCCACAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CCA 72 bp GGAAGTCAAAAACCTGATGAGAGCCAAGAGGTGAGCTaGAGATGTAGGCTGAGTCCCGATGCGGGGGAGAGG +
Preference number: 3 (lower is better)
Translates to: GSQKPDESQEVS*RCRLSPDAGER
Trigger: CCTCTCCCCCGCATCGGGACTCAGCCTACATCTCCAGCTCACCTCTTGGCTCTCATCAGGTTTTTGACTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CCA 72 bp ACCAGACTGGGATCTATAGACACTCATACTTTCAGCTaGAGGGCTGGCCCGATACTGAGGGCCTCTCCGGAG +
Preference number: 3 (lower is better)
Translates to: TRLGSIDTHTFS*RAGPILRASPE
Trigger: CTCCGGAGAGGCCCTCAGTATCGGGCCAGCCCTCCAGCTGAAAGTATGAGTGTCTATAGATCCCAGTCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR CAA 90 bp CCTGGATCGGGTGGGCTCACTGGGGTAACCTCCTTGAGTTGGAGACACTGGCGATTCAAGATCAGAAGCTaGCTGTCTATCTCATGCCCC +
Preference number: 3 (lower is better)
Translates to: PGSGGLTGVTSLSWRHWRFKIRS*LSISCP
Trigger: GGGGCATGAGATAGACAGCAAGCTTCTGATCTTGAA...TCGCCAGTGTCTCCAACTCAAGGAGGTTACCCCAGTGAGCCCACCCGATCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR TCA 72 bp CAAAGATGCTGTGCTAGATGGAAAGGAGGCCACGCCTaGAAAGGCACCTGCCCTGAGCCTGATGAGGAACTG +
Preference number: 3 (lower is better)
Translates to: QRCCARWKGGHA*KGTCPEPDEEL
Trigger: CAGTTCCTCATCAGGCTCAGGGCAGGTGCCTTTTCAGGCGTGGCCTCCTTTCCATCTAGCACAGCATCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR GCA 72 bp AACGGTCTCTTTGGTTTGATAGGGGATGTCTGCCCTTaGCGAGAGTCTCGGGACAGCTGCCTGTACAGGTTG +
Preference number: 3 (lower is better)
Translates to: NGLFGLIGDVCP*RESRDSCLYRL
Trigger: CAACCTGTACAGGCAGCTGTCCCGAGACTCTCGGCAAGGGCAGACATCCCCTATCAAACCAAAGAGACCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CCA 72 bp GAAGATCCTCTTTGGTCAATCCTCCATGCTGACAGATaGCGCCTGCACTCAGGCTGGCTTGGACATGCTGCA +
Preference number: 3 (lower is better)
Translates to: EDPLWSILHADR*RLHSGWLGHAA
Trigger: TGCAGCATGTCCAAGCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAGAGGATCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CCA 72 bp GGTATGCTGAGGAAGGTCGCTGTGGAAGATCCTCTTTaGTCAATCCTCCATGCTGACAGATGGCGCCTGCAC +
Preference number: 3 (lower is better)
Translates to: GMLRKVAVEDPL*SILHADRWRLH
Trigger: GTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAGAGGATCTTCCACAGCGACCTTCCTCAGCATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CCA 72 bp GCCTACACTTTGGGAATGCAGCAACGGCCTGGGAGTTaGCGGGTGCGGTTTGATTTCGTTAGGGTTGACACT +
Preference number: 3 (lower is better)
Translates to: AYTLGMQQRPGS*RVRFDFVRVDT
Trigger: AGTGTCAACCCTAACGAAATCAAACCGCACCCGCCAACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR TCA 72 bp TGTGGCCACAAGCATCTCAGGGTGGCTCACCTGCTGTaGGGCTTTGGACACCGAAATGAAGGTTACCAACAC +
Preference number: 3 (lower is better)
Translates to: CGHKHLRVAHLL*GFGHRNEGYQH
Trigger: GTGTTGGTAACCTTCATTTCGGTGTCCAAAGCCTCACAGCAGGTGAGCCACCCTGAGATGCTTGTGGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR TCA 72 bp TGGTGTCTGGCTGTATCTCACGCCACCTCGGTATGCTaGGGAAGGTCGCTGTGGAAGATCCTCTTTGGTCAA +
Preference number: 3 (lower is better)
Translates to: WCLAVSHATSVC*GRSLWKILFGQ
Trigger: TTGACCAAAGAGGATCTTCCACAGCGACCTTCCTCAGCATACCGAGGTGGCGTGAGATACAGCCAGACACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR GCA 72 bp GCCAGGCCTGTGCCGAGGCTTTGGTTCCAATGTTCTTaGTATCCACTCAATAGTGGCCTCGCTCACTCAAAG +
Preference number: 3 (lower is better)
Translates to: ARPVPRLWFQCS*YPLNSGLAHSK
Trigger: CTTTGAGTGAGCGAGGCCACTATTGAGTGGATAGCAAGAACATTGGAACCAAAGCCTCGGCACAGGCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR GCA 72 bp CTTTGGGAATGCAGCAACGGCCTGGGAGTTGGCGGGTaGGGTTTGATTTCGTTAGGGTTGACACTGATAGGT +
Preference number: 3 (lower is better)
Translates to: LWECSNGLGVGG*GLISLGLTLIG
Trigger: ACCTATCAGTGTCAACCCTAACGAAATCAAACCGCACCCGCCAACTCCCAGGCCGTTGCTGCATTCCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CCA 72 bp CCTGAAAAGGCACCTGCCCTGAGCCTGATGAGGAACTaGCCTCACTCAGCAGGAATCAGCCAAAGGAAACAA +
Preference number: 3 (lower is better)
Translates to: PEKAPALSLMRN*PHSAGISQRKQ
Trigger: TTGTTTCCTTTGGCTGATTCCTGCTGAGTGAGGCCAGTTCCTCATCAGGCTCAGGGCAGGTGCCTTTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR CAA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTCCCTGGGTGGAAATATaGGGACTCAGTCTCATGGTC +
Preference number: 3 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPPWVEI*GLSLMV
Trigger: GACCATGAGACTGAGTCCCAATATTTCCACCCAGGG...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR CAA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCACCCTGAAACAGTTTTaGCTGCGTCTGACTTTAAAA +
Preference number: 3 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGTLKQF*LRLTLK
Trigger: TTTTAAAGTCAGACGCAGCAAAAACTGTTTCAGGGT...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR CAA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTCACAATCTGGGCCTaGGCAGGCTGTAGCCTGAGC +
Preference number: 3 (lower is better)
Translates to: TYQTHGTGRSQIFIQETALTIWA*AGCSLS
Trigger: GCTCAGGCTACAGCCTGCCAAGGCCCAGATTGTGAG...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR TCA 72 bp ACTCTTGTCTGGCGCTGGGGACCAAAGGGATTGAGTTaGGCCCCCTCTAACCAGACTTTCTGGTTAGCGATT +
Preference number: 3 (lower is better)
Translates to: TLVWRWGPKGLS*APSNQTFWLAI
Trigger: AATCGCTAACCAGAAAGTCTGGTTAGAGGGGGCTCAACTCAATCCCTTTGGTCCCCAGCGCCAGACAAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR TCA 72 bp TGGATAATGGAGATTTGGGTCTGCCAGGAAGCTGACTaGCGCTTGTTTCCTGCTGATAGCGCACGGGTGAAC +
Preference number: 3 (lower is better)
Translates to: WIMEIWVCQEAD*RLFPADSARVN
Trigger: GTTCACCCGTGCGCTATCAGCAGGAAACAAGCGTCAGTCAGCTTCCTGGCAGACCCAAATCTCCATTATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR GCA 72 bp ACAAGCTTCAAGATCAGAAGCTTGCTGTCTATCTCATaGCCCCACCCAGGGCTGCAAAACAGGGCTGAAAGG +
Preference number: 3 (lower is better)
Translates to: TSFKIRSLLSIS*PHPGLQNRAER
Trigger: CCTTTCAGCCCTGTTTTGCAGCCCTGGGTGGGGGCATGAGATAGACAGCAAGCTTCTGATCTTGAAGCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR GCA 72 bp GTTGTAAGAGCTGATGTACAGCCAGTGCCAGGCCTGTaGCGAGGCTTTGGTTCCAATGTTCTTGCTATCCAC +
Preference number: 3 (lower is better)
Translates to: VVRADVQPVPGL*RGFGSNVLAIH
Trigger: GTGGATAGCAAGAACATTGGAACCAAAGCCTCGGCACAGGCCTGGCACTGGCTGTACATCAGCTCTTACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR GCA 72 bp GTGTTCAAAGAGTTCGTCTTGCACAACTGGCACAGATaGACGAAGACCCCTTCCAGGCCTCTGTTGCCTTCT +
Preference number: 3 (lower is better)
Translates to: VFKEFVLHNWHR*TKTPSRPLLPS
Trigger: AGAAGGCAACAGAGGCCTGGAAGGGGTCTTCGTGCATCTGTGCCAGTTGTGCAAGACGAACTCTTTGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR CAA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCTGGCCTGTTTTAGGTTaGGGGGTGGAGAGGTCCGTC +
Preference number: 3 (lower is better)
Translates to: TYQTHGTGRSQIFIQETAWPVLG*GVERSV
Trigger: GACGGACCTCTCCACCCCCAAACCTAAAACAGGCCA...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR CAA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTAGGCCGCTGGGCCATTTaGGATAATGGAGATTTGGGT +
Preference number: 3 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLGRWAI*DNGDLG
Trigger: ACCCAAATCTCCATTATCCAAAATGGCCCAGCGGCC...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR TCA 72 bp GCTCTGAAATACAGTACTCGGATCATTCCATGGCAGTaGAGTAGCAAACAGGGCACAGGGCACAGGCAGTCT +
Preference number: 3 (lower is better)
Translates to: ALKYSTRIIPWQ*SSKQGTGHRQS
Trigger: AGACTGCCTGTGCCCTGTGCCCTGTTTGCTACTTCACTGCCATGGAATGATCCGAGTACTGTATTTCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR TCA 72 bp TCCTTGAGTTGGAGACACTGGCGACAGCTCGTCACATaGCCTCTCATATGCAGGTTTCAGTGGGATCTCCAT +
Preference number: 3 (lower is better)
Translates to: SLSWRHWRQLVT*PLICRFQWDLH
Trigger: ATGGAGATCCCACTGAAACCTGCATATGAGAGGTCATGTGACGAGCTGTCGCCAGTGTCTCCAACTCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR GCA 72 bp GACCTCTCATATGCAGGTTTCAGTGGGATCTCCATTTaGTGGATGGAAGAAGATGGCCGGAAGGTCGGAGTT +
Preference number: 3 (lower is better)
Translates to: DLSYAGFSGISI*WMEEDGRKVGV
Trigger: AACTCCGACCTTCCGGCCATCTTCTTCCATCCAGCAAATGGAGATCCCACTGAAACCTGCATATGAGAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CCA 72 bp GGGGGAGGAGCGAGAAGGGTTTGTGCTCTATTAACTTaGGACTTTAATAGTGCACGTCTGCAACCCGGACAA +
Preference number: 3 (lower is better)
Translates to: GGGARRVCALLT*DFNSARLQPGQ
Trigger: TTGTCCGGGTTGCAGACGTGCACTATTAAAGTCCCAAGTTAATAGAGCACAAACCCTTCTCGCTCCTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CCA 72 bp AAGCATGTAGTGTTCAAAGAGTTCGTCTTGCACAACTaGCACAGATGCACGAAGACCCCTTCCAGGCCTCTG +
Preference number: 3 (lower is better)
Translates to: KHVVFKEFVLHN*HRCTKTPSRPL
Trigger: CAGAGGCCTGGAAGGGGTCTTCGTGCATCTGTGCCAGTTGTGCAAGACGAACTCTTTGAACACTACATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CCA 72 bp CGGCTCTGGCTGACTCCTATGTCTCCTTGTGAAGACTaGTATTTACTGGCCATTGAATGGGCTACTTGGCCA +
Preference number: 3 (lower is better)
Translates to: RLWLTPMSPCED*YLLAIEWATWP
Trigger: TGGCCAAGTAGCCCATTCAATGGCCAGTAAATACCAGTCTTCACAAGGAGACATAGGAGTCAGCCAGAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR CAA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCGCCTGTGCCGAGGCTTaGGTTCCAATGTTCTTGCTA +
Preference number: 3 (lower is better)
Translates to: TYQTHGTGRSQIFIQETAACAEA*VPMFLL
Trigger: TAGCAAGAACATTGGAACCAAAGCCTCGGCACAGGC...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR TCA 72 bp CTGACTGACGCTTGTTTCCTGCTGATAGCGCACGGGTaGACCAGACTGGGATCTATAGACACTCATACTTTC +
Preference number: 3 (lower is better)
Translates to: LTDACFLLIAHG*TRLGSIDTHTF
Trigger: GAAAGTATGAGTGTCTATAGATCCCAGTCTGGTTCACCCGTGCGCTATCAGCAGGAAACAAGCGTCAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR GCA 72 bp GGCACAGGCAGTCTGCTTGTAAGGAAAAACGTCTCCTaGCCCAACAAGCTCTGGTTGGCATATTCTAGTCAA +
Preference number: 3 (lower is better)
Translates to: GTGSLLVRKNVS*PNKLWLAYSSQ
Trigger: TTGACTAGAATATGCCAACCAGAGCTTGTTGGGGCAGGAGACGTTTTTCCTTACAAGCAGACTGCCTGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CCA 72 bp GTAGACAACAACGGGCATGACCCTGGGTGGAAATATTaGGACTCAGTCTCATGGTCCCAAGAGATTCCAATC +
Preference number: 3 (lower is better)
Translates to: VDNNGHDPGWKY*DSVSWSQEIPI
Trigger: GATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR CCA 72 bp AAGGGAGCTCTGGTCAACCTTCTTCCAGCCTCTGCCTaGCTGAAGTCCAAAGCATGTAGTGTTCAAAGAGTT +
Preference number: 3 (lower is better)
Translates to: KGALVNLLPASA*LKSKACSVQRV
Trigger: AACTCTTTGAACACTACATGCTTTGGACTTCAGCCAGGCAGAGGCTGGAAGAAGGTTGACCAGAGCTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR CAA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAACGAAAATCTCCTCGTaGGCATCTGAAGAGAGGGAG +
Preference number: 3 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLTKISS*ASEERE
Trigger: CTCCCTCTCTTCAGATGCCAACGAGGAGATTTTCGT...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR CAA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCAAGGGCTGGCTGTTTTaGACATGTTCCTACAATGCC +
Preference number: 3 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVKGWLF*TCSYNA
Trigger: GGCATTGTAGGAACATGTCAAAAACAGCCAGCCCTT...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR-3UTR CAA 90 bp CCCCACTGCACGGCTTCACAACTGTGTGGTGTTCAATATATCAGGAGAGAGAACGACATTTTAGGTGTTTaGCCCATAGGGTATAGGCCC +
Preference number: 3 (lower is better)
Translates to: PHCTASQLCGVQYIRRENDILGV*PIGYRP
Trigger: GGGCCTATACCCTATGGGCAAAACACCTAAAATGTC...GTTCTCTCTCCTGATATATTGAACACCACACAGTTGTGAAGCCGTGCAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR TCA 72 bp TTCAGTTGCTTAGTTGAGTTGTTTAGTTGTAAGAGCTaGTGTACAGCCAGTGCCAGGCCTGTGCCGAGGCTT +
Preference number: 3 (lower is better)
Translates to: FSCLVELFSCKS*CTASARPVPRL
Trigger: AAGCCTCGGCACAGGCCTGGCACTGGCTGTACATCAGCTCTTACAACTAAACAACTCAACTAAGCAACTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR GCA 72 bp TCGTTAGGGTTGACACTGATAGGTCTTCTGATTAAATaGGACACATCAGGGGAACCTAGTTGGCTGGAGGAG +
Preference number: 3 (lower is better)
Translates to: SLGLTLIGLLIK*DTSGEPSWLEE
Trigger: CTCCTCCAGCCAACTAGGTTCCCCTGATGTGTCGCATTTAATCAGAAGACCTATCAGTGTCAACCCTAACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CCA 72 bp AAAATGGAAGTAGACAACAACGGGCATGACCCTGGGTaGAAATATTGGGACTCAGTCTCATGGTCCCAAGAG +
Preference number: 3 (lower is better)
Translates to: KMEVDNNGHDPG*KYWDSVSWSQE
Trigger: CTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR CCA 72 bp CGTCTTTTAAACATTAGACTCCACGAACGGTCTCTTTaGTTTGATAGGGGATGTCTGCCCTTGCCGAGAGTC +
Preference number: 3 (lower is better)
Translates to: RLLNIRLHERSL*FDRGCLPLPRV
Trigger: GACTCTCGGCAAGGGCAGACATCCCCTATCAAACCAAAGAGACCGTTCGTGGAGTCTAATGTTTAAAAGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR CAA 90 bp ACTTACTTACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGGTGAGTTCTGATGAGTaGGAGAAAGGGCAGGTGAGG +
Preference number: 3 (lower is better)
Translates to: TYLLTRHMGLVAARFLFRVSSDE*EKGQVR
Trigger: CCTCACCTGCCCTTTCTCCAACTCATCAGAACTCAC...CCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGTAAGTAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR-3UTR CAA 90 bp ATAGCCTATTCCATTTTGTGGCAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGGCCTGTGCCGAGGCTTaGGTTCCAATGTTCTTGCTA +
Preference number: 3 (lower is better)
Translates to: IAYSILWQRFSEHWFCPRACAEA*VPMFLL
Trigger: TAGCAAGAACATTGGAACCAAAGCCTCGGCACAGGC...CCTTGGACAAAACCAGTGCTCACTGAATCTTTGCCACAAAATGGAATAGGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR TCA 72 bp TCTTTGCTACAAAACAAGCGCAGTGCAGAGCCACAGTaGCACCTAGTGGTAAACTATGGTGAAGCACAAGTG +
Preference number: 3 (lower is better)
Translates to: SLLQNKRSAEPQ*HLVVNYGEAQV
Trigger: CACTTGTGCTTCACCATAGTTTACCACTAGGTGTCACTGTGGCTCTGCACTGCGCTTGTTTTGTAGCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CCA 72 bp TACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTaGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGG +
Preference number: 3 (lower is better)
Translates to: YTTRTSVKAIVS*KKLTSVSDLPG
Trigger: CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR TCA 72 bp GGACACCGAAATGAAGGTTACCAACACTTCAGCCCTTaGGTGGTCTGTATGACAAAAGGAGTTGATGAAAAC +
Preference number: 3 (lower is better)
Translates to: GHRNEGYQHFSP*VVCMTKGVDEN
Trigger: GTTTTCATCAACTCCTTTTGTCATACAGACCACTCAAGGGCTGAAGTGTTGGTAACCTTCATTTCGGTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR CAA 90 bp GCGAGAAGGGTTTGTGCTCTATTAACTTGGGACTTTAATAGTGCACGTCTGCAAGTTGTGATCCACTGCTaGATGTCTTTCCTTTCCTTT +
Preference number: 3 (lower is better)
Translates to: ARRVCALLTWDFNSARLQVVIHC*MSFLSF
Trigger: AAAGGAAAGGAAAGACATCAAGCAGTGGATCACAAC...TTGCAGACGTGCACTATTAAAGTCCCAAGTTAATAGAGCACAAACCCTTCTCGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CCA 72 bp ACTTACTTACTTACTTACTTACCAGACACATGGGACTaGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCT +
Preference number: 3 (lower is better)
Translates to: TYLLTYLPDTWD*SQPDFYSGNCP
Trigger: AGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGTAAGTAAGTAAGTAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR CCA 72 bp AAGGGCACTTACTTACTTACTTACTTACCAGACACATaGGACTGGTCGCAGCCAGATTTTTATTCAGGAAAC +
Preference number: 3 (lower is better)
Translates to: KGTYLLTYLPDT*DWSQPDFYSGN
Trigger: GTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGTAAGTAAGTAAGTAAGTGCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR TCA 72 bp AATGGAACATACAACTTGGTGAGAAACCTATTAAACTaGAGTTTGTCACCTCTGTCCTCCATTTCAGGGTGG +
Preference number: 3 (lower is better)
Translates to: NGTYNLVRNLLN*SLSPLSSISGW
Trigger: CCACCCTGAAATGGAGGACAGAGGTGACAAACTTCAGTTTAATAGGTTTCTCACCAAGTTGTATGTTCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR CAA 90 bp CAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGCATTTCTGCAGTAGAAAAATAACCCTGAAACAGTTTTaGCTGCGTCTGACTTTAAAA +
Preference number: 3 (lower is better)
Translates to: QRFSEHWFCPRHFCSRKITLKQF*LRLTLK
Trigger: TTTTAAAGTCAGACGCAGCAAAAACTGTTTCAGGGT...TATTTTTCTACTGCAGAAATGCCTTGGACAAAACCAGTGCTCACTGAATCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR GCA 72 bp GATCACATAAAAAGGAGACAGGCCACAATAATTTTCTaGTCTGGTTTGGCACATTGTAAGGTAACTTTCAGT +
Preference number: 3 (lower is better)
Translates to: DHIKRRQATIIF*SGLAHCKVTFS
Trigger: ACTGAAAGTTACCTTACAATGTGCCAAACCAGAGCAGAAAATTATTGTGGCCTGTCTCCTTTTTATGTGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583016.1
3UTR CCA 72 bp AATCCAGGCTTAACTACATTAGCAAACTTGTATATCTaGACAACGACCTGGGGTACTGTACATGATTCTAAT +
Preference number: 3 (lower is better)
Translates to: NPGLTTLANLYI*TTTWGTVHDSN
Trigger: ATTAGAATCATGTACAGTACCCCAGGTCGTTGTCCAGATATACAAGTTTGCTAATGTAGTTAAGCCTGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR-3UTR CAA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACAGGGAAAAAGTTTTGTTaGAAAGAAGACTCTGGTGCA +
Preference number: 3 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATGKKFC*KEDSGA
Trigger: TGCACCAGAGTCTTCTTTCAAACAAAACTTTTTCCC...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000583016.1
3UTR-3UTR CAA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACAGAGAGGGAAAAAGTTTaGTTTGAAAGAAGACTCTGG +
Preference number: 3 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATEREKV*FERRLW
Trigger: CCAGAGTCTTCTTTCAAACAAAACTTTTTCCCTCTC...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583016.1
3UTR TCA 72 bp AGAGGGGCTCATAAACTACTATACAATATTAAGGACTaGGAATACCTTTCTCTAAGCTGTTCTGTTTACAAT +
Preference number: 3 (lower is better)
Translates to: RGAHKLLYNIKD*EYLSLSCSVYN
Trigger: ATTGTAAACAGAACAGCTTAGAGAAAGGTATTCTCAGTCCTTAATATTGTATAGTAGTTTATGAGCCCCTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCTCCGGCAACTGCTGCTaGGGCTGCGGTGGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPSGNCC*GCGGGG
Trigger: ACCGCCGCCACCGCAGCCTCAGCAGCAGTTGCCGGA...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCCGGGAGCCCCTGGCTaGGCCGGGCCTCTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMPGAPG*AGPLSG
Trigger: TCCAGACAGAGGCCCGGCCCAGCCAGGGGCTCCCGG...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGGGGCTGGCCCGATACTaGGGGCCTCTCCGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMGLARY*GPLRRG
Trigger: CCCTCTCCGGAGAGGCCCTCAGTATCGGGCCAGCCC...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCGGGCTGGCCCGATACTaGGGGCCTCTCCGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAAGLARY*GPLRRG
Trigger: CCCTCTCCGGAGAGGCCCTCAGTATCGGGCCAGCCC...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GCTCTGCACAGTGGCTCCACCAGCCCCATTGTGCTTGTGTCCAGGCCCCCAGCCCCACCAGCCCCATTGTaGTTGTGTCCAGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: ALHSGSTSPIVLVSRPPAPPAPL*LCPGPQ
Trigger: CTGGGGGCCTGGACACAAGCACAATGGGGCTGGTGG...GGCTGGGGGCCTGGACACAAGCACAATGGGGCTGGTGGAGCCACTGTGCAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCCCTCGGCGGTTTGGCTaGGCCACTGCCGCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAAPRRFG*ATAAPC
Trigger: ACAAGGGGCGGCAGTGGCCCAGCCAAACCGCCGAGG...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCGGGGGAGAGGAGGGTaGGCTCTGGATGACCGGGAG +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPRGRGG*ALDDRE
Trigger: CTCCCGGTCATCCAGAGCCCACCCTCCTCTCCCCCG...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
3UTR CAA 72 bp ACTGAGGGCCTCTCCGGAGAGGGGAAGGGGGAGGGCTaGGGTATTCTTTGCCCTGTCCTCCCACAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TEGLSGEGKGEG*GILCPVLPQEG
Trigger: CCCCTCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCCCCTCTCCGGAGAGGCCCTCAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCGCTGGAGATGTAGGCTaGGTCCCGATGCGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPAGDVG*VPMRGR
Trigger: TCTCCCCCGCATCGGGACTCAGCCTACATCTCCAGC...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGGGGGATGACGGTGCTTaGATGGACGGCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SPGSREAASQSAACKGFQGDDGA*MDGWAG
Trigger: CCCAGCCCAGCCGTCCATTCAAGCACCGTCATCCCC...CTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGGGTGGCGGCGGTGGCTaGTGTGGCTGCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPGGGGG*CGCCIC
Trigger: ACAGATGCAGCAGCCACAGCAGCCACCGCCGCCACC...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GCTCTGCACAGTGGCTCCACCAGCCCCATTGTGCTTGTGTCCAGGCCCCCAGCCCTGGCTTGGACATGCTaGACCGGCCTTCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: ALHSGSTSPIVLVSRPPALAWTC*TGLPSP
Trigger: AGGGGATGGAAGGCCGGTGCAGCATGTCCAAGCCAG...GGCTGGGGGCCTGGACACAAGCACAATGGGGCTGGTGGAGCCACTGTGCAGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGCATCGCCCATGTGGCTaGACCTCGTGGGCGACTCGG +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMHRPCG*TSWATR
Trigger: CCGAGTCGCCCACGAGGTCCAGCCACATGGGCGATG...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389520.8
CDS-3UTR CCA 90 bp AGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGTGGCCATCGCCCATGTaGCTGGACCTCGTGGGCGAC +
Preference number: 4 (lower is better)
Translates to: SPGSREAASQSAACKGFQWPSPM*LDLVGD
Trigger: GTCGCCCACGAGGTCCAGCCACATGGGCGATGGCCA...CTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389520.8
CDS-3UTR CCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCCGCCTGCACTCAGGCTaGCTTGGACATGCTGCACCG +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPRLHSG*LGHAAP
Trigger: CGGTGCAGCATGTCCAAGCCAGCCTGAGTGCAGGCG...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGGCTGGAGATGTAGGCTaGGTCCCGATGCGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPAGDVG*VPMRGR
Trigger: TCTCCCCCGCATCGGGACTCAGCCTACATCTCCAGC...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ATCCTAATGCACACTGCAGACCTGGTGGCTGCAGGGCGCTGGCGGTCTGGGGAGCTGGAGACGTGGGACTaGGGACGGTGTCCACAGATG +
Preference number: 4 (lower is better)
Translates to: ILMHTADLVAAGRWRSGELETWD*GRCPQM
Trigger: CATCTGTGGACACCGTCCTCAGTCCCACGTCTCCAG...CTCCCCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGAGGAGGAGGCCTGGCTaGCTCGCTCCAAGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPRRRPG*LAPRGL
Trigger: GAGACCTCTTGGAGCGAGTCAGCCAGGCCTCCTCCT...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCCTTCTCCTGAACCTCTaGGCCCGCTTGCCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPLLLNL*ARLPVA
Trigger: GGCAACAGGCAAGCGGGCTCAGAGGTTCAGGAGAAG...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCCGCTTTCTGTGGAGATaGCACCTTGCCCAGAGCGGC +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPRFLWR*HLAQSG
Trigger: GCCGCTCTGGGCAAGGTGGCATCTCCACAGAAAGCG...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR GCA 90 bp AGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCCTCCTCCTGCCGCCTaGGCATTTCCGGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SPGSREAASQSAACKGFQPPPAA*AFPEFL
Trigger: CAGGAACTCCGGAAATGCGCAGGCGGCAGGAGGAGG...CTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGGGCACACCTCCAGTTTaGCCCTTCCGGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMGTPPV*PFRLQL
Trigger: CAGCTGCAGCCGGAAGGGGCAAACTGGAGGTGTGCC...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCGTTCCGGCACCCCACTaGCCTATCCAAAGGGCGCAT +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPVPAPH*PIQRAH
Trigger: ATGCGCCCTTTGGATAGGGCAGTGGGGTGCCGGAAC...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCCTGGCTTGGACATGCTaGACCGGCCTTCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPLAWTC*TGLPSP
Trigger: AGGGGATGGAAGGCCGGTGCAGCATGTCCAAGCCAG...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGGCTGGCTTGGACATaGTGCACCGGCCTTCCATCC +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPRLAWT*CTGLPS
Trigger: GGATGGAAGGCCGGTGCAGCATGTCCAAGCCAGCCT...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGGGGGATGTCTGCCCTTaGCGAGAGTCTCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLGDVCP*RESRDS
Trigger: GCTGTCCCGAGACTCTCGGCAAGGGCAGACATCCCC...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGGGGGATGTCTGCCCTTaGCGAGAGTCTCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMGDVCP*RESRDS
Trigger: GCTGTCCCGAGACTCTCGGCAAGGGCAGACATCCCC...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GCTCTGCACAGTGGCTCCACCAGCCCCATTGTGCTTGTGTCCAGGCCCCCAGCCCTGTCTTCGATCCGGTaGTTCCTCGCTCCCTCCATC +
Preference number: 4 (lower is better)
Translates to: ALHSGSTSPIVLVSRPPALSSIR*FLAPSI
Trigger: GATGGAGGGAGCGAGGAACCACCGGATCGAAGACAG...GGCTGGGGGCCTGGACACAAGCACAATGGGGCTGGTGGAGCCACTGTGCAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCTTTCAGCTGGAGGGCTaGCCCGATACTGAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPFQLEG*PDTEGL
Trigger: GAGGCCCTCAGTATCGGGCCAGCCCTCCAGCTGAAA...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATCCTAATGCACACTGCAGACCTGGTGGCTGCAGGGCGCTGGCGGTCTGGGGAGAATGCAGCAACGGCCTaGGAGTTGGCGGGTGCGGTT +
Preference number: 4 (lower is better)
Translates to: ILMHTADLVAAGRWRSGENAATA*ELAGAV
Trigger: AACCGCACCCGCCAACTCCCAGGCCGTTGCTGCATT...CTCCCCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGCCTGGCGCACTGTGCTaGATAGTGGCACTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMPGALC*IVALLL
Trigger: GAGGAGCAGTGCCACTATTCAGCACAGTGCGCCAGG...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGAGGCTCCTGTGGGGATaGCGGTGCTTGAATGGACGG +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLRLLWG*RCLNGR
Trigger: CCGTCCATTCAAGCACCGTCATCCCCACAGGAGCCT...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCCCAACCGGCTCTGGCTaGCTCCTATGTCTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPPTGSG*LLCLLV
Trigger: CACAAGGAGACATAGGAGTCAGCCAGAGCCGGTTGG...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGGCCACCTCGGTATGCTaGGGAAGGTCGCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLATSVC*GRSLWK
Trigger: CTTCCACAGCGACCTTCCTCAGCATACCGAGGTGGC...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCCTGGAGACGTGGGACTaGGGACGGTGTCCACAGATG +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAALETWD*GRCPQM
Trigger: CATCTGTGGACACCGTCCTCAGTCCCACGTCTCCAG...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCGGCCAAAAAGCAATCTaGGAGGCCACTGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPGQKAI*EATGLL
Trigger: CAGGAGCCCAGTGGCCTCTCAGATTGCTTTTTGGCC...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGCGCTTTCTGTGGAGATaGCACCTTGCCCAGAGCGGC +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMRFLWR*HLAQSG
Trigger: GCCGCTCTGGGCAAGGTGGCATCTCCACAGAAAGCG...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR GCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCGCTCAGGTACCCTGCTaGTGCAGCATATCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAAAQVPC*CSISQG
Trigger: CCCCTGGGATATGCTGCAGCAGCAGGGTACCTGAGC...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGGTTTGGCTGGGCCACTaGCGCCCCTTGTTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMVWLGH*RPLFQE
Trigger: CTCTTGGAACAAGGGGCGGCAGTGGCCCAGCCAAAC...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCCCATCATCAGGGGAGTaGGGCCCTGCTTGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGPSSGE*GPACLP
Trigger: TGGCAGACAAGCAGGGCCGCACTCCCCTGATGATGG...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGGTTCCGGCACCCCACTaGCCTATCCAAAGGGCGCAT +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMVPAPH*PIQRAH
Trigger: ATGCGCCCTTTGGATAGGGCAGTGGGGTGCCGGAAC...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCCCCTTGCTGGGGAACTaGCACAGGGAGCTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAAPLLGN*HRELRH
Trigger: ATGCCTCAGCTCCCTGTGGCAGTTCCCCAGCAAGGG...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGTGTAGCCTGAGCCCTTaGTGGGGAACTGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMCSLSP*WGTATG
Trigger: CCCTGTGGCAGTTCCCCAGCAAGGGCTCAGGCTACA...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCCTGGCTTGGACATGCTaGACCGGCCTTCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAALAWTC*TGLPSP
Trigger: AGGGGATGGAAGGCCGGTGCAGCATGTCCAAGCCAG...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGAGGCTGGCTTGGACATaGTGCACCGGCCTTCCATCC +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMRLAWT*CTGLPS
Trigger: GGATGGAAGGCCGGTGCAGCATGTCCAAGCCAGCCT...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCTGACAGATGGCGCCTaGACTCAGGCTGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMLTDGA*TQAGLD
Trigger: GTCCAAGCCAGCCTGAGTGCAGGCGCCATCTGTCAG...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GCTCTGCACAGTGGCTCCACCAGCCCCATTGTGCTTGTGTCCAGGCCCCCAGCCAGGATGCTGACTGGCTaGGTCCGATCTGTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: ALHSGSTSPIVLVSRPPARMLTG*VRSVVS
Trigger: AGACACCACAGATCGGACGCAGCCAGTCAGCATCCT...GGCTGGGGGCCTGGACACAAGCACAATGGGGCTGGTGGAGCCACTGTGCAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACATGCTCCTCGGCGGTTTaGCTGGGCCACTGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTCSSAV*LGHCRP
Trigger: GGGGCGGCAGTGGCCCAGCCAAACCGCCGAGGAGCA...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGTGTCTGGCTTGGAGGTaGCCATCGCCCATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPCLAWR*PSPMWL
Trigger: CAGCCACATGGGCGATGGCCACCTCCAAGCCAGACA...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCGGCGGTGGCTGCTGTaGCTGCTGCATCTGTCTACA +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLRRWLL*LLHLST
Trigger: TGTAGACAGATGCAGCAGCCACAGCAGCCACCGCCG...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCCGGCGGTGGCTGCTGTaGCTGCTGCATCTGTCTACA +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGRRWLL*LLHLST
Trigger: TGTAGACAGATGCAGCAGCCACAGCAGCCACCGCCG...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCGGAAGGGGGAGGGCTTaGGTATTCTTTGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPGRGRA*VFFALS
Trigger: GGACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCC...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCGCACTCAGGCTGGCTTaGACATGCTGCACCGGCCTT +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGALRLA*TCCTGL
Trigger: AAGGCCGGTGCAGCATGTCCAAGCCAGCCTGAGTGC...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGAATGCAGCAACGGCCTaGGAGTTGGCGGGTGCGGTT +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMNAATA*ELAGAV
Trigger: AACCGCACCCGCCAACTCCCAGGCCGTTGCTGCATT...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCAATGCAGCAACGGCCTaGGAGTTGGCGGGTGCGGTT +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAANAATA*ELAGAV
Trigger: AACCGCACCCGCCAACTCCCAGGCCGTTGCTGCATT...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGTCCTGGATCGGGTaGGCTCACTGGGGTAACCTC +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMWSWIG*AHWGNL
Trigger: GAGGTTACCCCAGTGAGCCCACCCGATCCAGGACCA...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAGGTCCGATTCTGCTaGTGGAGGTGGGGGTACTGC +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMQVRFC*WRWGYC
Trigger: GCAGTACCCCCACCTCCACCAGCAGAATCGGACCTG...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCCTGAGGCAGGTTGCCTaGAGACGTGGGACTGAGGAC +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAALRQVA*RRGTED
Trigger: GTCCTCAGTCCCACGTCTCCAGGCAACCTGCCTCAG...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGGAGAAACTGAAGTCCTaGCTCCCGGGAGGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMEKLKS*LPGGRF
Trigger: GAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTC...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCAGGCCACTGGGCTCCTaGCTAGAGGTTGCCGCTAGA +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGRPLGS*LEVAAR
Trigger: TCTAGCGGCAACCTCTAGCCAGGAGCCCAGTGGCCT...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGGAGGCTGCTGGGCACTaGGAGCATCAAGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLEAAGH*EHQEEA
Trigger: AGCCTCCTCTTGATGCTCCCAGTGCCCAGCAGCCTC...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp AGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGGCTGGTGGCTGCTACTaGATTTGGCCGTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: SPGSREAASQSAACKGFQAGGCY*IWPWHE
Trigger: CTCATGCCACGGCCAAATTCAGTAGCAGCCACCAGC...CTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCAGCATGCTCTGCAGGTaGGGTTCCCGAAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGSMLCR*GSRRSC
Trigger: GCAGCTTCTTCGGGAACCTCACCTGCAGAGCATGCT...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGGAGGCCATGGGGTCTTaGACACAGGAACGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMEAMGS*TQERRL
Trigger: GAGCCTTCGTTCCTGTGTTCAAGACCCCATGGCCTC...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGTGCTGGCTGCAGCAATaGGGGCCTGTTGGATGGCAT +
Preference number: 4 (lower is better)
Translates to: SPGSREAASQSAACKGFQCWLQQ*GPVGWH
Trigger: ATGCCATCCAACAGGCCCTCATTGCTGCAGCCAGCA...CTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCTGCTGGCTGCAGCAATaGGGGCCTGTTGGATGGCAT +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAACWLQQ*GPVGWH
Trigger: ATGCCATCCAACAGGCCCTCATTGCTGCAGCCAGCA...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AGAGGGGAAGGGGGAGGGCTTGGGTATTCTTTGCCCTGTCCTCCCACAGGAGGGTGCTGGCTGCAGCAATaGGGGCCTGTTGGATGGCAT +
Preference number: 4 (lower is better)
Translates to: RGEGGGLGYSLPCPPTGGCWLQQ*GPVGWH
Trigger: ATGCCATCCAACAGGCCCTCATTGCTGCAGCCAGCA...CCCTCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCCCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCTGTTGGGACACAGCTTaGTGGCCTCGTTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPCWDTA*WPRSGP
Trigger: AGGACCTGAACGAGGCCATCAAGCTGTGTCCCAACA...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGGGTCTGCCAGGAAGCTaGCTGACGCTTGTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMGLPGS*LTLVSC
Trigger: GCAGGAAACAAGCGTCAGTCAGCTTCCTGGCAGACC...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ACGGTGCTTGAATGGACGGCTGGGCTGGGCTGGTTACTTCTCACAATCTGGGCCTGGCAGGCTGTAGCCTaGGCCCTTGCTGGGGAACTG +
Preference number: 4 (lower is better)
Translates to: TVLEWTAGLGWLLLTIWAWQAVA*ALAGEL
Trigger: CAGTTCCCCAGCAAGGGCTCAGGCTACAGCCTGCCA...GGCCCAGATTGTGAGAAGTAACCAGCCCAGCCCAGCCGTCCATTCAAGCACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp ATCCTCTTTGGTCAATCCTCCATGCTGACAGATGGCGCCTGCACTCAGGCTGGCGGGGATGACGGTGCTTaGATGGACGGCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ILFGQSSMLTDGACTQAGGDDGA*MDGWAG
Trigger: CCCAGCCCAGCCGTCCATTCAAGCACCGTCATCCCC...GCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGGTCAATCCTCCATGCTaGCAGATGGCGCCTGCACTC +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMVNPPC*QMAPAL
Trigger: GAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGAC...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AGAGGGGAAGGGGGAGGGCTTGGGTATTCTTTGCCCTGTCCTCCCACAGGAGGGGTCAATCCTCCATGCTaGCAGATGGCGCCTGCACTC +
Preference number: 4 (lower is better)
Translates to: RGEGGGLGYSLPCPPTGGVNPPC*QMAPAL
Trigger: GAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGAC...CCCTCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCCCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGAGGAGGAGGCCTGGCTaGCTCGCTCCAAGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: RACGWAQTRETEVLAPGRRRRPG*LAPRGL
Trigger: GAGACCTCTTGGAGCGAGTCAGCCAGGCCTCCTCCT...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCGGCCAAAAAGCAATCTaGGAGGCCACTGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGGQKAI*EATGLL
Trigger: CAGGAGCCCAGTGGCCTCTCAGATTGCTTTTTGGCC...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGATTCGCCTGGACAGGTaGGTGCGGGTGGTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: RACGWAQTRETEVLAPGRIRLDR*VRVVCG
Trigger: GCCACACACCACCCGCACTCACCTGTCCAGGCGAAT...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp GCTCTGCACAGTGGCTCCACCAGCCCCATTGTGCTTGTGTCCAGGCCCCCAGCCTCTGGATCTCTGAGCTaGTGTGTATCCGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: ALHSGSTSPIVLVSRPPASGSLS*CVSGAG
Trigger: TCCTGCACCGGATACACAGCAGCTCAGAGATCCAGA...GGCTGGGGGCCTGGACACAAGCACAATGGGGCTGGTGGAGCCACTGTGCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCAGGTACCCTGCTGCTaGAGCATATCCCAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLQVPCC*SISQGS
Trigger: ACTCCCCTGGGATATGCTGCAGCAGCAGGGTACCTG...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ATCCTAATGCACACTGCAGACCTGGTGGCTGCAGGGCGCTGGCGGTCTGGGGAGACAGCAGCACCACAATaGTCAGGTACCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ILMHTADLVAAGRWRSGETAAPQ*SGTLLL
Trigger: CAGCAGCAGGGTACCTGAGCATTGTGGTGCTGCTGT...CTCCCCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCCCTTGGCCCGTTTCTTaGACAGCAGCACCACAATGC +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPPWPVS*TAAPQC
Trigger: GCATTGTGGTGCTGCTGTGCAAGAAACGGGCCAAGG...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGGGCACACCTCCAGTTTaGCCCTTCCGGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RACGWAQTRETEVLAPGRGTPPV*PFRLQL
Trigger: CAGCTGCAGCCGGAAGGGGCAAACTGGAGGTGTGCC...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GAGAAGCGAAGGCCTACACTTTGGGAATGCAGCAACGGCCTGGGAGTTGGCGGGCTGACAGATGGCGCCTaGACTCAGGCTGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: EKRRPTLWECSNGLGVGGLTDGA*TQAGLD
Trigger: GTCCAAGCCAGCCTGAGTGCAGGCGCCATCTGTCAG...CCCGCCAACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGGCCTTCGCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR GCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGTCAGCGAGTGTTTGCTaGTGGGGAAGGGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLSASVC*WGRGSS
Trigger: AGAGCTGCCCCTTCCCCAGCAGCAAACACTCGCTGA...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp ATCCTAATGCACACTGCAGACCTGGTGGCTGCAGGGCGCTGGCGGTCTGGGGAGCACAACTGGCACAGATaGACGAAGACCCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ILMHTADLVAAGRWRSGEHNWHR*TKTPSR
Trigger: CCTGGAAGGGGTCTTCGTGCATCTGTGCCAGTTGTG...CTCCCCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp ATCCTAATGCACACTGCAGACCTGGTGGCTGCAGGGCGCTGGCGGTCTGGGGAGTGCCCAGAGCGGCTTTaGCGAGAGTCTACACTTGAC +
Preference number: 4 (lower is better)
Translates to: ILMHTADLVAAGRWRSGECPERL*RESTLD
Trigger: GTCAAGTGTAGACTCTCGCCAAAGCCGCTCTGGGCA...CTCCCCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp ATCCTAATGCACACTGCAGACCTGGTGGCTGCAGGGCGCTGGCGGTCTGGGGAGTCATCAGTCAGTGGGTaGAGAGAGGCCACTGCCACA +
Preference number: 4 (lower is better)
Translates to: ILMHTADLVAAGRWRSGESSVSG*REATAT
Trigger: TGTGGCAGTGGCCTCTCTCCACCCACTGACTGATGA...CTCCCCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATCCTAATGCACACTGCAGACCTGGTGGCTGCAGGGCGCTGGCGGTCTGGGGAGAGCTGCCAGATCCAGTaGGGTACGGCCATTCTTGTC +
Preference number: 4 (lower is better)
Translates to: ILMHTADLVAAGRWRSGESCQIQ*GTAILV
Trigger: GACAAGAATGGCCGTACCCCACTGGATCTGGCAGCT...CTCCCCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CCTGGATCGGGTGGGCTCACTGGGGTAACCTCCTTGAGTTGGAGACACTGGCGACGGCGGTGGCTGCTGTaGCTGCTGCATCTGTCTACA +
Preference number: 4 (lower is better)
Translates to: PGSGGLTGVTSLSWRHWRRRWLL*LLHLST
Trigger: TGTAGACAGATGCAGCAGCCACAGCAGCCACCGCCG...TCGCCAGTGTCTCCAACTCAAGGAGGTTACCCCAGTGAGCCCACCCGATCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGAGCCGGGGAAGTGTGTaGTGGGCTAGGCCTGTAATG +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMSRGSV*WARPVM
Trigger: CATTACAGGCCTAGCCCACCACACACTTCCCCGGCT...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCAACGGCCTGGGAGTTaGCGGGTGCGGTTTGATTTC +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLQRPGS*RVRFDF
Trigger: GAAATCAAACCGCACCCGCCAACTCCCAGGCCGTTG...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCCTGCGGCTGGCTGTGTaGGTGACACTGGCTAAGGAT +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAALRLAV*VTLAKD
Trigger: ATCCTTAGCCAGTGTCACCCACACAGCCAGCCGCAG...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GCTCTGCACAGTGGCTCCACCAGCCCCATTGTGCTTGTGTCCAGGCCCCCAGCCAGAGCAAGGGAGCTCTaGTCAACCTTCTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ALHSGSTSPIVLVSRPPARAREL*STFFQP
Trigger: AGGCTGGAAGAAGGTTGACCAGAGCTCCCTTGCTCT...GGCTGGGGGCCTGGACACAAGCACAATGGGGCTGGTGGAGCCACTGTGCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CAA 72 bp GCTGGGCTGGGCTGGTTACTTCTCACAATCTGGGCCTaGGCAGGCTGTAGCCTGAGCCCTTGCTGGGGAACT +
Preference number: 4 (lower is better)
Translates to: AGLGWLLLTIWA*AGCSLSPCWGT
Trigger: AGTTCCCCAGCAAGGGCTCAGGCTACAGCCTGCCAAGGCCCAGATTGTGAGAAGTAACCAGCCCAGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CAA 72 bp TCCATGCTGACAGATGGCGCCTGCACTCAGGCTGGCTaGGACATGCTGCACCGGCCTTCCATCCCCTACGAT +
Preference number: 4 (lower is better)
Translates to: SMLTDGACTQAG*DMLHRPSIPYD
Trigger: ATCGTAGGGGATGGAAGGCCGGTGCAGCATGTCCAAGCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGGCGAGAGTCTACACTTaGCTGTCTTCGATCCGGTGG +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMARVYT*LSSIRW
Trigger: CCACCGGATCGAAGACAGTCAAGTGTAGACTCTCGC...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR TCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCGCGAGAGTCTACACTTaGCTGTCTTCGATCCGGTGG +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAAARVYT*LSSIRW
Trigger: CCACCGGATCGAAGACAGTCAAGTGTAGACTCTCGC...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR TCA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCTCGGAGTGCAGCATaGACCAAAGCACACTGCCCG +
Preference number: 4 (lower is better)
Translates to: RACGWAQTRETEVLAPGRPRSAA*TKAHCP
Trigger: CGGGCAGTGTGCTTTGGTTCATGCTGCACTCCGAGG...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTCGATCATGGCCCCATaGTCTACCAGGAACTGGACC +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGSIMAP*STRNWT
Trigger: GGTCCAGTTCCTGGTAGATCATGGGGCCATGATCGA...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AGAGGGGAAGGGGGAGGGCTTGGGTATTCTTTGCCCTGTCCTCCCACAGGAGGGTCGATCATGGCCCCATaGTCTACCAGGAACTGGACC +
Preference number: 4 (lower is better)
Translates to: RGEGGGLGYSLPCPPTGGSIMAP*STRNWT
Trigger: GGTCCAGTTCCTGGTAGATCATGGGGCCATGATCGA...CCCTCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTCCGGCAACTGCTGCTaGGGCTGCGGTGGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGSGNCC*GCGGGG
Trigger: ACCGCCGCCACCGCAGCCTCAGCAGCAGTTGCCGGA...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCCTGATAGCGCACGGGTaGACCAGACTGGGATCTATA +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPLIAHG*TRLGSI
Trigger: TATAGATCCCAGTCTGGTTCACCCGTGCGCTATCAG...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CCTGGATCGGGTGGGCTCACTGGGGTAACCTCCTTGAGTTGGAGACACTGGCGACCAACCGGCTCTGGCTaGCTCCTATGTCTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: PGSGGLTGVTSLSWRHWRPTGSG*LLCLLV
Trigger: CACAAGGAGACATAGGAGTCAGCCAGAGCCGGTTGG...TCGCCAGTGTCTCCAACTCAAGGAGGTTACCCCAGTGAGCCCACCCGATCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGGTGGGGGTACTGCTaGGTCCGTGCTGTTTTATCT +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPRWGYC*VRAVLS
Trigger: AGATAAAACAGCACGGACTCAGCAGTACCCCCACCT...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTTGTCCTGGTATGCCTaGGCCACAGGTAGAGTCCGA +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGLSWYA*ATGRVR
Trigger: TCGGACTCTACCTGTGGCTCAGGCATACCAGGACAA...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCCTCCTCGTTGGCATCTaGAGAGAGGGAGAGAGCATG +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAALLVGI*REGESM
Trigger: CATGCTCTCTCCCTCTCTTCAGATGCCAACGAGGAG...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ATCCTCTTTGGTCAATCCTCCATGCTGACAGATGGCGCCTGCACTCAGGCTGGCCCTCCTCCTGCCGCCTaGGCATTTCCGGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: ILFGQSSMLTDGACTQAGPPPAA*AFPEFL
Trigger: CAGGAACTCCGGAAATGCGCAGGCGGCAGGAGGAGG...GCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAGAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR GCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGACAGCAGCACCACAATaGTCAGGTACCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMTAAPQ*SGTLLL
Trigger: CAGCAGCAGGGTACCTGAGCATTGTGGTGCTGCTGT...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCATCGCCATAGAAAGCTaGCAGATCCAGTGGGGTACG +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPIAIES*QIQWGT
Trigger: CGTACCCCACTGGATCTGGCAGCTTTCTATGGCGAT...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGCTGCGAACTGTCTGCTaGTGCGTTTTGCCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMLRTVC*CVLPLL
Trigger: GAGCAAGGGCAAAACGCAGCAGCAGACAGTTCGCAG...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR GCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCCTGTGGCTCAGGTTCTaGTTCTTCCGGCAACTGCTG +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGLWLRF*FFRQLL
Trigger: CAGCAGTTGCCGGAAGAAGCAGAACCTGAGCCACAG...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCCTTGCTGGGGAACTaGCACAGGGAGCTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: RACGWAQTRETEVLAPGRPLLGN*HRELRH
Trigger: ATGCCTCAGCTCCCTGTGGCAGTTCCCCAGCAAGGG...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCCTGGGAGTTGGCGGGTaGGGTTTGATTTCGTTAGGG +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAALGVGG*GLISLG
Trigger: CCCTAACGAAATCAAACCGCACCCGCCAACTCCCAG...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ACGGTGCTTGAATGGACGGCTGGGCTGGGCTGGTTACTTCTCACAATCTGGGCCCTGATGTACAGCCAGTaGCAGGCCTGTGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: TVLEWTAGLGWLLLTIWALMYSQ*QACAEA
Trigger: AGCCTCGGCACAGGCCTGGCACTGGCTGTACATCAG...GGCCCAGATTGTGAGAAGTAACCAGCCCAGCCCAGCCGTCCATTCAAGCACCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR GCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGGGAAACTGCCCTTCCTaGAGCCCTTCCCTAACAGAG +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLGNCPS*SPSLTE
Trigger: CTCTGTTAGGGAAGGGCTGCAGGAAGGGCAGTTTCC...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCGGAAACTGCCCTTCCTaGAGCCCTTCCCTAACAGAG +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAAGNCPS*SPSLTE
Trigger: CTCTGTTAGGGAAGGGCTGCAGGAAGGGCAGTTTCC...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCTGCCCAGAGCGGCTTTaGCGAGAGTCTACACTTGAC +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAACPERL*RESTLD
Trigger: GTCAAGTGTAGACTCTCGCCAAAGCCGCTCTGGGCA...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR CCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCCGGGACAGCGTAGTCTaGCTCAAAAGCACAGTCGCT +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAARDSVV*LKSTVA
Trigger: AGCGACTGTGCTTTTGAGCCAGACTACGCTGTCCCG...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR CCA 90 bp ATCCTAATGCACACTGCAGACCTGGTGGCTGCAGGGCGCTGGCGGTCTGGGGAGATCACCTTCACTCACTaGAAGTGGCGGGACAGCGTA +
Preference number: 4 (lower is better)
Translates to: ILMHTADLVAAGRWRSGEITFTH*KWRDSV
Trigger: TACGCTGTCCCGCCACTTCCAGTGAGTGAAGGTGAT...CTCCCCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCAGTGGGCAGAGCTGGTaGCTGCTACTGAATTTGGCC +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGSGQSW*LLLNLA
Trigger: GGCCAAATTCAGTAGCAGCCACCAGCTCTGCCCACT...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGAGTGGGCAGAGCTGGTaGCTGCTACTGAATTTGGCC +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPSGQSW*LLLNLA
Trigger: GGCCAAATTCAGTAGCAGCCACCAGCTCTGCCCACT...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGTGGCATCCACATGTTTaGGGGAGGCATGTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLWHPHV*GRHVGC
Trigger: ACAGCCCACATGCCTCCCCCAAACATGTGGATGCCA...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCTGGCATCCACATGTTTaGGGGAGGCATGTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAAWHPHV*GRHVGC
Trigger: ACAGCCCACATGCCTCCCCCAAACATGTGGATGCCA...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTCCGGAAGGAGGCCATaGGGTCTTGAACACAGGAAC +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMSGRRP*GLEHRN
Trigger: GTTCCTGTGTTCAAGACCCCATGGCCTCCTTCCGGA...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGTCATCAGTCAGTGGGTaGAGAGAGGCCACTGCCACA +
Preference number: 4 (lower is better)
Translates to: SPGSREAASQSAACKGFQSSVSG*REATAT
Trigger: TGTGGCAGTGGCCTCTCTCCACCCACTGACTGATGA...CTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGTCATCAGTCAGTGGGTaGAGAGAGGCCACTGCCACA +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPSSVSG*REATAT
Trigger: TGTGGCAGTGGCCTCTCTCCACCCACTGACTGATGA...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGAGGGGAAGGGGGAGGGCTTGGGTATTCTTTGCCCTGTCCTCCCACAGGAGGGATGCTCATCAGTCAGTaGGTGGAGAGAGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: RGEGGGLGYSLPCPPTGGMLISQ*VERGHC
Trigger: GCAGTGGCCTCTCTCCACCCACTGACTGATGAGCAT...CCCTCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCAATACTCCTTGCTGCTaGCCGGCCATCGTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAANTPCC*PAIVQS
Trigger: TGACTGGACGATGGCCGGCCAGCAGCAAGGAGTATT...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGATCTGCCAGTGGCCCTaGCGCACTGTGCTGAATAGT +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPICQWP*RTVLNS
Trigger: ACTATTCAGCACAGTGCGCCAGGGCCACTGGCAGAT...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGATCTGCCAGTGGCCCTaGCGCACTGTGCTGAATAGT +
Preference number: 4 (lower is better)
Translates to: SPGSREAASQSAACKGFQICQWP*RTVLNS
Trigger: ACTATTCAGCACAGTGCGCCAGGGCCACTGGCAGAT...CTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGAGGGGAAGGGGGAGGGCTTGGGTATTCTTTGCCCTGTCCTCCCACAGGAGGGATCTGCCAGTGGCCCTaGCGCACTGTGCTGAATAGT +
Preference number: 4 (lower is better)
Translates to: RGEGGGLGYSLPCPPTGGICQWP*RTVLNS
Trigger: ACTATTCAGCACAGTGCGCCAGGGCCACTGGCAGAT...CCCTCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGTCCACGGTTCCTAGATaGCCTTCGGAAGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLSTVPR*PSEAAI
Trigger: GATGGCTGCTTCCGAAGGCCATCTAGGAACCGTGGA...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGTCCACGGTTCCTAGATaGCCTTCGGAAGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMSTVPR*PSEAAI
Trigger: GATGGCTGCTTCCGAAGGCCATCTAGGAACCGTGGA...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGAGCTGCCAGATCCAGTaGGGTACGGCCATTCTTGTC +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPSCQIQ*GTAILV
Trigger: GACAAGAATGGCCGTACCCCACTGGATCTGGCAGCT...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCCCGGGAGCCCCTGGCTaGGCCGGGCCTCTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVPGAPG*AGPLSG
Trigger: TCCAGACAGAGGCCCGGCCCAGCCAGGGGCTCCCGG...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TCCTGGCCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTATGACCGGGAGCCCCTaGCTGGGCCGGGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SWPVLGLGVERSVYFAESMTGSP*LGRASV
Trigger: GACAGAGGCCCGGCCCAGCCAGGGGCTCCCGGTCAT...AGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGGCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGAGCCAAGAGGTGAGCTaGAGATGTAGGCTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMSQEVS*RCRLSP
Trigger: GGGACTCAGCCTACATCTCCAGCTCACCTCTTGGCT...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GAGAAGCGAAGGCCTACACTTTGGGAATGCAGCAACGGCCTGGGAGTTGGCGGGAGCCGGGGAAGTGTGTaGTGGGCTAGGCCTGTAATG +
Preference number: 4 (lower is better)
Translates to: EKRRPTLWECSNGLGVGGSRGSV*WARPVM
Trigger: CATTACAGGCCTAGCCCACCACACACTTCCCCGGCT...CCCGCCAACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGGCCTTCGCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGACGGCTGGGCTGGGCTaGTTACTTCTCACAATCTGG +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMTAGLG*LLLTIW
Trigger: CCAGATTGTGAGAAGTAACCAGCCCAGCCCAGCCGT...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATCCTAATGCACACTGCAGACCTGGTGGCTGCAGGGCGCTGGCGGTCTGGGGAGAATGGACGGCTGGGCTaGGCTGGTTACTTCTCACAA +
Preference number: 4 (lower is better)
Translates to: ILMHTADLVAAGRWRSGENGRLG*AGYFSQ
Trigger: TTGTGAGAAGTAACCAGCCCAGCCCAGCCGTCCATT...CTCCCCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGGCTGCGTCCGATCTGTaGTGTCTGGCTGTATCTCAC +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMAASDL*CLAVSH
Trigger: GTGAGATACAGCCAGACACCACAGATCGGACGCAGC...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGCGAAGGCCTACACTTTaGGAATGCAGCAACGGCCTG +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMRRPTL*ECSNGL
Trigger: CAGGCCGTTGCTGCATTCCCAAAGTGTAGGCCTTCG...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGGAGGGAGAGAGCATGTaGCTGGGCACAGACAAGAGA +
Preference number: 4 (lower is better)
Translates to: SPGSREAASQSAACKGFQEGESM*LGTDKR
Trigger: TCTCTTGTCTGTGCCCAGCCACATGCTCTCTCCCTC...CTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACTGCACACTGCAGACCTaGTGGCTGCAGGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHCTLQT*WLQGAG
Trigger: GCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCA...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACAGGTGAGTGCGGGTaGTGTGTGGCGTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAATGECG*CVAFQM
Trigger: CATTTGGAACGCCACACACCACCCGCACTCACCTGT...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCCTTCCAGCCTCTGCCTaGCTGAAGTCCAAAGCATGT +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPLPASA*LKSKAC
Trigger: ACATGCTTTGGACTTCAGCCAGGCAGAGGCTGGAAG...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGACTGTGGCCACCATGTaGCCACAAGCATCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMTVATM*PQASQG
Trigger: ACCCTGAGATGCTTGTGGCCACATGGTGGCCACAGT...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCACTCTTGTCTGGCGCTaGGGACCAAAGGGATTGAGT +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPTLVWR*GPKGLS
Trigger: ACTCAATCCCTTTGGTCCCCAGCGCCAGACAAGAGT...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCCTGGCTGAACTTCTGTaGCTTTCTCTCCAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPLAELL*LSLQGG
Trigger: TCCTCCTTGGAGAGAAAGTCACAGAAGTTCAGCCAG...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCCGCTGGGTGATTGCTaGGGTCTGATTTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: SPGSREAASQSAACKGFQPLGDC*GLIFIL
Trigger: CAGGATGAAAATCAGACCTCAGCAATCACCCAGCGG...CTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCCGCTGGGTGATTGCTaGGGTCTGATTTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPPLGDC*GLIFIL
Trigger: CAGGATGAAAATCAGACCTCAGCAATCACCCAGCGG...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCAAGGCAAGTAACGTGTaGCCACTCCTCGGATCACAG +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGKASNV*PLLGSQ
Trigger: CTGTGATCCGAGGAGTGGTCACACGTTACTTGCCTT...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AGAGGGGAAGGGGGAGGGCTTGGGTATTCTTTGCCCTGTCCTCCCACAGGAGGGGACACCGAGAGAGGTTaGGGAGGAGAGACACCTTTA +
Preference number: 4 (lower is better)
Translates to: RGEGGGLGYSLPCPPTGGDTERG*GGETPL
Trigger: TAAAGGTGTCTCTCCTCCTCAACCTCTCTCGGTGTC...CCCTCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCCCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp ACGGTGCTTGAATGGACGGCTGGGCTGGGCTGGTTACTTCTCACAATCTGGGCCGGTCTGCCAGGAAGCTaGCTGACGCTTGTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: TVLEWTAGLGWLLLTIWAGLPGS*LTLVSC
Trigger: GCAGGAAACAAGCGTCAGTCAGCTTCCTGGCAGACC...GGCCCAGATTGTGAGAAGTAACCAGCCCAGCCCAGCCGTCCATTCAAGCACCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGAGGTGGGGGTACTGCTaGGTCCGTGCTGTTTTATCT +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMRWGYC*VRAVLS
Trigger: AGATAAAACAGCACGGACTCAGCAGTACCCCCACCT...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GCTCTGCACAGTGGCTCCACCAGCCCCATTGTGCTTGTGTCCAGGCCCCCAGCCAATGTTGCTGATGGATaGTGGTGGACTGAAGGACTC +
Preference number: 4 (lower is better)
Translates to: ALHSGSTSPIVLVSRPPANVADG*WWTEGL
Trigger: GAGTCCTTCAGTCCACCATCATCCATCAGCAACATT...GGCTGGGGGCCTGGACACAAGCACAATGGGGCTGGTGGAGCCACTGTGCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp CCTGGATCGGGTGGGCTCACTGGGGTAACCTCCTTGAGTTGGAGACACTGGCGATTGTCCTGGTATGCCTaGGCCACAGGTAGAGTCCGA +
Preference number: 4 (lower is better)
Translates to: PGSGGLTGVTSLSWRHWRLSWYA*ATGRVR
Trigger: TCGGACTCTACCTGTGGCTCAGGCATACCAGGACAA...TCGCCAGTGTCTCCAACTCAAGGAGGTTACCCCAGTGAGCCCACCCGATCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGAGATGCCAGCAGTGCTaGGACCTGGCCAAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPRCQQC*DLAKKQ
Trigger: TTGCTTTTTGGCCAGGTCTCAGCACTGCTGGCATCT...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GCTCTGCACAGTGGCTCCACCAGCCCCATTGTGCTTGTGTCCAGGCCCCCAGCCGTGGCAAAGATTCAGTaGGCACTGGTTTTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: ALHSGSTSPIVLVSRPPAVAKIQ*ALVLSK
Trigger: CTTGGACAAAACCAGTGCTCACTGAATCTTTGCCAC...GGCTGGGGGCCTGGACACAAGCACAATGGGGCTGGTGGAGCCACTGTGCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCAGCGCGGCGCTGGCCTaGTCTCTACGCGTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVSAALA*SLRVQR
Trigger: CCGCTGGACGCGTAGAGATCAGGCCAGCGCCGCGCT...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGTGCGAGCACCACCCATaGTCTGTCTTGGCATTCGTA +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMCEHHP*SVLAFV
Trigger: TACGAATGCCAAGACAGAGCATGGGTGGTGCTCGCA...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACACCTCCTCCTGCCGCCTaGGCATTTCCGGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTPPPAA*AFPEFL
Trigger: CAGGAACTCCGGAAATGCGCAGGCGGCAGGAGGAGG...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CCTGGATCGGGTGGGCTCACTGGGGTAACCTCCTTGAGTTGGAGACACTGGCGAAACGAAGGCTCAGCATaGTCTGCAGGTGAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: PGSGGLTGVTSLSWRHWRNEGSA*SAGEVP
Trigger: GGGAACCTCACCTGCAGAGCATGCTGAGCCTTCGTT...TCGCCAGTGTCTCCAACTCAAGGAGGTTACCCCAGTGAGCCCACCCGATCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR GCA 90 bp ATCCTAATGCACACTGCAGACCTGGTGGCTGCAGGGCGCTGGCGGTCTGGGGAGATGGCCTGGAAGATATaGTCATCAGTCAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: ILMHTADLVAAGRWRSGEMAWKI*SSVSGW
Trigger: CCACCCACTGACTGATGAGCATATCTTCCAGGCCAT...CTCCCCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCCCTCCCATTCTAGTGTaGCTTCAATGCTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPPPILV*LQCSQH
Trigger: ATGCTGGGAGCATTGAAGGCACACTAGAATGGGAGG...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp AGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGTTAAATACTCCTTGCTaGTGGCCGGCCATCGTCCAG +
Preference number: 4 (lower is better)
Translates to: SPGSREAASQSAACKGFQLNTPC*WPAIVQ
Trigger: CTGGACGATGGCCGGCCAGCAGCAAGGAGTATTTAA...CTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTTAAATACTCCTTGCTaGTGGCCGGCCATCGTCCAG +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMLNTPC*WPAIVQ
Trigger: CTGGACGATGGCCGGCCAGCAGCAAGGAGTATTTAA...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGATAACCCATGCTGGCTaGAGCAATGAGGGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLITHAG*SNEGLL
Trigger: CAACAGGCCCTCATTGCTGCAGCCAGCATGGGTTAT...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGATAACCCATGCTGGCTaGAGCAATGAGGGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMITHAG*SNEGLL
Trigger: CAACAGGCCCTCATTGCTGCAGCCAGCATGGGTTAT...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ATCCTAATGCACACTGCAGACCTGGTGGCTGCAGGGCGCTGGCGGTCTGGGGAGAAAAGATCAACAATCTaGCAGTGGCCCTGGCGCACT +
Preference number: 4 (lower is better)
Translates to: ILMHTADLVAAGRWRSGEKRSTI*QWPWRT
Trigger: AGTGCGCCAGGGCCACTGGCAGATTGTTGATCTTTT...CTCCCCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGATCGCCATAGAAAGCTaGCAGATCCAGTGGGGTACG +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLIAIES*QIQWGT
Trigger: CGTACCCCACTGGATCTGGCAGCTTTCTATGGCGAT...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCCCTACACTTTGGGAATaGAGCAACGGCCTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGPTLWE*SNGLGV
Trigger: AACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGG...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGCCTACACTTTGGGAATaGAGCAACGGCCTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMPTLWE*SNGLGV
Trigger: AACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGG...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAGCCCAGGTCCGATTCTaGTGGTGGAGGTGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTAQVRF*WWRWGY
Trigger: GTACCCCCACCTCCACCAGCAGAATCGGACCTGGGC...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCCGCTTCCCAGTCGGCTaGATGCAAAGGATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGRFPVG*MQRISA
Trigger: TGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCG...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GCTCTGCACAGTGGCTCCACCAGCCCCATTGTGCTTGTGTCCAGGCCCCCAGCCTTTTATTCAGGAAACTaGCCTTCCTGCAGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: ALHSGSTSPIVLVSRPPAFYSGN*PSCSPS
Trigger: GGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAA...GGCTGGGGGCCTGGACACAAGCACAATGGGGCTGGTGGAGCCACTGTGCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGATCACCTTCACTCACTaGAAGTGGCGGGACAGCGTA +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPITFTH*KWRDSV
Trigger: TACGCTGTCCCGCCACTTCCAGTGAGTGAAGGTGAT...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR CCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCATTTGTACTGATGGGTaGGAGTGTAGAGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPICTDG*ECRAGA
Trigger: AGCCCCTGCTCTACACTCCCACCCATCAGTACAAAT...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCCAAGTGGGCAGAGCTaGTGGCTGCTACTGAATTTG +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMPSGQS*WLLLNL
Trigger: CAAATTCAGTAGCAGCCACCAGCTCTGCCCACTTGG...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCGCAATGAGGGCCTGTTaGATGGCATGGCTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPAMRAC*MAWLFL
Trigger: TAAGAAGAGCCATGCCATCCAACAGGCCCTCATTGC...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTACCTCGGCGGTTTGGCTaGGCCACTGCCGCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLPRRFG*ATAAPC
Trigger: ACAAGGGGCGGCAGTGGCCCAGCCAAACCGCCGAGG...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCTGTCAGCATGGTCTGTaGCAGCTCCGTTATCCACCA +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAACQHGL*QLRYPP
Trigger: TGGTGGATAACGGAGCTGCCACAGACCATGCTGACA...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGGATGATCATGATGTCTaGCTTGGAGGTGGCCATCGC +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLDDHDV*LGGGHR
Trigger: GCGATGGCCACCTCCAAGCCAGACATCATGATCATC...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTCCGGGAGCCCCTGGCTaGGCCGGGCCTCTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPPGAPG*AGPLSG
Trigger: TCCAGACAGAGGCCCGGCCCAGCCAGGGGCTCCCGG...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGAGCCGGGGAAGTGTGTaGTGGGCTAGGCCTGTAATG +
Preference number: 4 (lower is better)
Translates to: RACGWAQTRETEVLAPGRSRGSV*WARPVM
Trigger: CATTACAGGCCTAGCCCACCACACACTTCCCCGGCT...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATCCTAATGCACACTGCAGACCTGGTGGCTGCAGGGCGCTGGCGGTCTGGGGAGTTACTTCTCACAATCTaGGCCTTGGCAGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: ILMHTADLVAAGRWRSGELLLTI*ALAGCS
Trigger: GCTACAGCCTGCCAAGGCCCAGATTGTGAGAAGTAA...CTCCCCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGAATGGACGGCTGGGCTaGGCTGGTTACTTCTCACAA +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPNGRLG*AGYFSQ
Trigger: TTGTGAGAAGTAACCAGCCCAGCCCAGCCGTCCATT...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GAGAAGCGAAGGCCTACACTTTGGGAATGCAGCAACGGCCTGGGAGTTGGCGGGATCGGGTGGGCTCACTaGGGTAACCTCCTTGAGTTG +
Preference number: 4 (lower is better)
Translates to: EKRRPTLWECSNGLGVGGIGWAH*GNLLEL
Trigger: CAACTCAAGGAGGTTACCCCAGTGAGCCCACCCGAT...CCCGCCAACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGGCCTTCGCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCTATGATCCCCATGAATaGTGTGGTCCTGGATCGGGT +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPYDPHE*CGPGSG
Trigger: ACCCGATCCAGGACCACACCATTCATGGGGATCATA...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAAGGATTTCAGCATGTaGGCTGCCACCTCTGAACAC +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPKDFSM*AATSEH
Trigger: GTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTT...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATCCTAATGCACACTGCAGACCTGGTGGCTGCAGGGCGCTGGCGGTCTGGGGAGAAGGATTTCAGCATGTaGGCTGCCACCTCTGAACAC +
Preference number: 4 (lower is better)
Translates to: ILMHTADLVAAGRWRSGEKDFSM*AATSEH
Trigger: GTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTT...CTCCCCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATCCTAATGCACACTGCAGACCTGGTGGCTGCAGGGCGCTGGCGGTCTGGGGAGCTGTATGACACCATCTaGGTTTACAGGAAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: ILMHTADLVAAGRWRSGELYDTI*VYRKRA
Trigger: GGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAG...CTCCCCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGGGGCATGACCCTGGGTaGAAATATTGGGACTCAGTC +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPGHDPG*KYWDSV
Trigger: GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCC...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCAACCCAGACGAGTCATaGGTGTGTTTGCTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAANPDES*VCLLPH
Trigger: ATGAGGCAGCAAACACACTCATGACTCGTCTGGGTT...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGGTTATTCTGGATCTCTaGGCTGCTGTGTATCCGGTG +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPVILDL*AAVYPV
Trigger: CACCGGATACACAGCAGCTCAGAGATCCAGAATAAC...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGGTTATTCTGGATCTCTaGGCTGCTGTGTATCCGGTG +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMVILDL*AAVYPV
Trigger: CACCGGATACACAGCAGCTCAGAGATCCAGAATAAC...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCAATGCTCCCAGCATTaGTGGCCTGGAAGATATGCT +
Preference number: 4 (lower is better)
Translates to: SPGSREAASQSAACKGFQQCSQH*WPGRYA
Trigger: AGCATATCTTCCAGGCCATCAATGCTGGGAGCATTG...CTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCCAATGCTCCCAGCATTaGTGGCCTGGAAGATATGCT +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGQCSQH*WPGRYA
Trigger: AGCATATCTTCCAGGCCATCAATGCTGGGAGCATTG...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCCCGTTCTTATCCAAATaGTCCACCTTGGCCCGTTTC +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAAPFLSK*STLARF
Trigger: GAAACGGGCCAAGGTGGATCATTTGGATAAGAACGG...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCGACTGTCAAAGCTGTTaGTCTGTGCTCGCTCTACTT +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPDCQSC*SVLALL
Trigger: AAGTAGAGCGAGCACAGATCAACAGCTTTGACAGTC...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AGAGGGGAAGGGGGAGGGCTTGGGTATTCTTTGCCCTGTCCTCCCACAGGAGGGTCAAACAAGCCCAGCTaGGGGCTGTCAATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: RGEGGGLGYSLPCPPTGGSNKPS*GLSILL
Trigger: AAGAAGGATTGACAGCCCTCAGCTGGGCTTGTTTGA...CCCTCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGTGGGTAATAGGATGCTaGCTGGCTGCGTCCGATCTG +
Preference number: 4 (lower is better)
Translates to: RACGWAQTRETEVLAPGRWVIGC*LAASDL
Trigger: CAGATCGGACGCAGCCAGTCAGCATCCTATTACCCA...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ATCCTCTTTGGTCAATCCTCCATGCTGACAGATGGCGCCTGCACTCAGGCTGGCGGCTGGCTGTGTGGGTaGCACTGGCTAAGGATGCAA +
Preference number: 4 (lower is better)
Translates to: ILFGQSSMLTDGACTQAGGWLCG*HWLRMQ
Trigger: TTGCATCCTTAGCCAGTGTCACCCACACAGCCAGCC...GCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAGAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR GCA 90 bp ATCCTAATGCACACTGCAGACCTGGTGGCTGCAGGGCGCTGGCGGTCTGGGGAGCATCCTGTACTTCCATaGTGTATTGGTCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: ILMHTADLVAAGRWRSGEHPVLP*CIGHLA
Trigger: AGCCAGGTGACCAATACAGCATGGAAGTACAGGATG...CTCCCCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTTAAATCCTGCTGTGTaGGAGCACCACCCATGCTCT +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMLNPAV*EHHPCS
Trigger: AGAGCATGGGTGGTGCTCGCACACAGCAGGATTTAA...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp AGAGGGGAAGGGGGAGGGCTTGGGTATTCTTTGCCCTGTCCTCCCACAGGAGGGTTAAATCCTGCTGTGTaGGAGCACCACCCATGCTCT +
Preference number: 4 (lower is better)
Translates to: RGEGGGLGYSLPCPPTGGLNPAV*EHHPCS
Trigger: AGAGCATGGGTGGTGCTCGCACACAGCAGGATTTAA...CCCTCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR GCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCATGGCCTGGAAGATATaGTCATCAGTCAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGMAWKI*SSVSGW
Trigger: CCACCCACTGACTGATGAGCATATCTTCCAGGCCAT...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGATGGCCTGGAAGATATaGTCATCAGTCAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMMAWKI*SSVSGW
Trigger: CCACCCACTGACTGATGAGCATATCTTCCAGGCCAT...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCCAGATGACCTCGGAGTaGAGCATGAACCAAAGCACA +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGQMTSE*SMNQST
Trigger: TGTGCTTTGGTTCATGCTGCACTCCGAGGTCATCTG...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCTTCTTAAATACTCCTTaGTGCTGGCCGGCCATCGTC +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAAFLNTP*CWPAIV
Trigger: GACGATGGCCGGCCAGCAGCAAGGAGTATTTAAGAA...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGTCTGCTGCTGCGTTTTaGCCTTGCTCTCGCATAGTA +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPSAAAF*PCSRIV
Trigger: TACTATGCGAGAGCAAGGGCAAAACGCAGCAGCAGA...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR GCA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCGAACTGTCTGCTGCTaGGTTTTGCCCTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: RACGWAQTRETEVLAPGRRTVCC*VLPLLS
Trigger: CGAGAGCAAGGGCAAAACGCAGCAGCAGACAGTTCG...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR GCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAAGGCTGGCTTGGACATaGTGCACCGGCCTTCCATCC +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTRLAWT*CTGLPS
Trigger: GGATGGAAGGCCGGTGCAGCATGTCCAAGCCAGCCT...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTGCCCAGGTCCGATTCTaGTGGTGGAGGTGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPAQVRF*WWRWGY
Trigger: GTACCCCCACCTCCACCAGCAGAATCGGACCTGGGC...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGTCCCAGTCGGCTGCATaGAAAGGATTTCAGCATGTG +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLSQSAA*KGFQHV
Trigger: CACATGCTGAAATCCTTTGCATGCAGCCGACTGGGA...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCTCCCAGTCGGCTGCATaGAAAGGATTTCAGCATGTG +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAASQSAA*KGFQHV
Trigger: CACATGCTGAAATCCTTTGCATGCAGCCGACTGGGA...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTATGCTCCTCGGCGGTTTaGCTGGGCCACTGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLCSSAV*LGHCRP
Trigger: GGGGCGGCAGTGGCCCAGCCAAACCGCCGAGGAGCA...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCGTACTACTGAGAGATaGCCCTTCAAACAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SPGSREAASQSAACKGFQRTTER*PFKQAQ
Trigger: CTGGGCTTGTTTGAAGGGCCATCTCTCAGTAGTACG...CTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CCTGGATCGGGTGGGCTCACTGGGGTAACCTCCTTGAGTTGGAGACACTGGCGACAACGTGCTCGATCATaGCCCCATGATCTACCAGGA +
Preference number: 4 (lower is better)
Translates to: PGSGGLTGVTSLSWRHWRQRARS*PHDLPG
Trigger: TCCTGGTAGATCATGGGGCCATGATCGAGCACGTTG...TCGCCAGTGTCTCCAACTCAAGGAGGTTACCCCAGTGAGCCCACCCGATCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCTCAGCAGAAGTCTCTaGATCTCACGGTTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLLSRSL*ISRLLG
Trigger: TCCCAACAACCGTGAGATCCAGAGACTTCTGCTGAG...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCCTCAGCAGAAGTCTCTaGATCTCACGGTTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAALSRSL*ISRLLG
Trigger: TCCCAACAACCGTGAGATCCAGAGACTTCTGCTGAG...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACATGACCGGGAGCCCCTaGCTGGGCCGGGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHMTGSP*LGRASV
Trigger: GACAGAGGCCCGGCCCAGCCAGGGGCTCCCGGTCAT...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GCTCTGCACAGTGGCTCCACCAGCCCCATTGTGCTTGTGTCCAGGCCCCCAGCCAGCCTACAGAACTACTaGACCGGAAGTCAAAAACCT +
Preference number: 4 (lower is better)
Translates to: ALHSGSTSPIVLVSRPPASLQNY*TGSQKP
Trigger: AGGTTTTTGACTTCCGGTCCAGTAGTTCTGTAGGCT...GGCTGGGGGCCTGGACACAAGCACAATGGGGCTGGTGGAGCCACTGTGCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTTACTTCTCACAATCTaGGCCTTGGCAGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGLLLTI*ALAGCS
Trigger: GCTACAGCCTGCCAAGGCCCAGATTGTGAGAAGTAA...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGAGGGGAAGGGGGAGGGCTTGGGTATTCTTTGCCCTGTCCTCCCACAGGAGGGTTACTTCTCACAATCTaGGCCTTGGCAGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: RGEGGGLGYSLPCPPTGGLLLTI*ALAGCS
Trigger: GCTACAGCCTGCCAAGGCCCAGATTGTGAGAAGTAA...CCCTCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CCA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGATCTGTGGTGTCTaGCTGTATCTCACGCCACCT +
Preference number: 4 (lower is better)
Translates to: RACGWAQTRETEVLAPGRPICGV*LYLTPP
Trigger: AGGTGGCGTGAGATACAGCCAGACACCACAGATCGG...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ACGGTGCTTGAATGGACGGCTGGGCTGGGCTGGTTACTTCTCACAATCTGGGCCGGGAACCTAGTTGGCTaGAGGAGCGCTCCAGATCTA +
Preference number: 4 (lower is better)
Translates to: TVLEWTAGLGWLLLTIWAGNLVG*RSAPDL
Trigger: TAGATCTGGAGCGCTCCTCCAGCCAACTAGGTTCCC...GGCCCAGATTGTGAGAAGTAACCAGCCCAGCCCAGCCGTCCATTCAAGCACCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CCA 90 bp ACGGTGCTTGAATGGACGGCTGGGCTGGGCTGGTTACTTCTCACAATCTGGGCCCGAAGGCCTACACTTTaGGAATGCAGCAACGGCCTG +
Preference number: 4 (lower is better)
Translates to: TVLEWTAGLGWLLLTIWARRPTL*ECSNGL
Trigger: CAGGCCGTTGCTGCATTCCCAAAGTGTAGGCCTTCG...GGCCCAGATTGTGAGAAGTAACCAGCCCAGCCCAGCCGTCCATTCAAGCACCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CCA 90 bp GAGAAGCGAAGGCCTACACTTTGGGAATGCAGCAACGGCCTGGGAGTTGGCGGGGTAACCTCCTTGAGTTaGAGACACTGGCGACAGCTC +
Preference number: 4 (lower is better)
Translates to: EKRRPTLWECSNGLGVGGVTSLS*RHWRQL
Trigger: GAGCTGTCGCCAGTGTCTCCAACTCAAGGAGGTTAC...CCCGCCAACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGGCCTTCGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCGAGAGAGCATGTGGCTaGGCACAGACAAGAGAAACT +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAAERACG*AQTRET
Trigger: AGTTTCTCTTGTCTGTGCCCAGCCACATGCTCTCTC...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCGAGAGAGCATGTGGCTaGGCACAGACAAGAGAAACT +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGERACG*AQTRET
Trigger: AGTTTCTCTTGTCTGTGCCCAGCCACATGCTCTCTC...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CTGGTCAACCTTCTTCCAGCCTCTGCCTGGCTGAAGTCCAAAGCATGTAGTGTTACACTGCAGACCTGGTaGCTGCAGGGCGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: LVNLLPASAWLKSKACSVTLQTW*LQGAGG
Trigger: ACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGT...AACACTACATGCTTTGGACTTCAGCCAGGCAGAGGCTGGAAGAAGGTTGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGTACTTACCAGACACATaGGACTGGTCGCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPYLPDT*DWSQPD
Trigger: ATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGTA...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTACTTACCAGACACATaGGACTGGTCGCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMYLPDT*DWSQPD
Trigger: ATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGTA...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACGCTTGCCTGTTGCCCTaGAAGCAGCTCCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHACLLP*KQLLSP
Trigger: GGGAGAGAGGAGCTGCTTCCAGGGCAACAGGCAAGC...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTTCGTCTTGCACAACTaGCACAGATGCACGAAGACC +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMFVLHN*HRCTKT
Trigger: GGTCTTCGTGCATCTGTGCCAGTTGTGCAAGACGAA...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGGCACCTCTTGCCCCCTaGGATAGCCTATTCCATTTT +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMAPLAP*DSLFHF
Trigger: AAAATGGAATAGGCTATCCCAGGGGGCAAGAGGTGC...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGGAATTAACTCTTGTCTaGCGCTGGGGACCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPELTLV*RWGPKG
Trigger: TCCCTTTGGTCCCCAGCGCCAGACAAGAGTTAATTC...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CAA 72 bp GTGCTTGTGTCCAGGCCCCCAGCCAGCCACCTTTTCTaGGGAGCAGCCAGAGCTGAGTTCAAGGCATTGCAT +
Preference number: 4 (lower is better)
Translates to: VLVSRPPASHLF*GAARAEFKALH
Trigger: ATGCAATGCCTTGAACTCAGCTCTGGCTGCTCCCAAGAAAAGGTGGCTGGCTGGGGGCCTGGACACAAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CAA 72 bp TGGATCGGGTGGGCTCACTGGGGTAACCTCCTTGAGTaGGAGACACTGGCGACAGCTCGTCACATGACCTCT +
Preference number: 4 (lower is better)
Translates to: WIGWAHWGNLLE*ETLATARHMTS
Trigger: AGAGGTCATGTGACGAGCTGTCGCCAGTGTCTCCAACTCAAGGAGGTTACCCCAGTGAGCCCACCCGATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGGACTTATCCGCTGGGTaGTTGCTGAGGTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMDLSAG*LLRSDF
Trigger: AAAATCAGACCTCAGCAATCACCCAGCGGATAAGTC...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGTCATGTCTCTGCGCTTaGTTAGGAACATGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SPGSREAASQSAACKGFQSCLCA*LGTWRG
Trigger: ACCTCTCCATGTTCCTAATCAAGCGCAGAGACATGA...CTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGGACTGTCAAAGCTGTTaGTCTGTGCTCGCTCTACTT +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMDCQSC*SVLALL
Trigger: AAGTAGAGCGAGCACAGATCAACAGCTTTGACAGTC...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TCCTGGCCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTTGGCAGGCTGTAGCCTaGGCCCTTGCTGGGGAACTG +
Preference number: 4 (lower is better)
Translates to: SWPVLGLGVERSVYFAESWQAVA*ALAGEL
Trigger: CAGTTCCCCAGCAAGGGCTCAGGCTACAGCCTGCCA...AGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGGCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTACGATTCCCCCAATTaGCCCTTGATAAACCAACCG +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGYDSPN*PLINQP
Trigger: CGGTTGGTTTATCAAGGGTCAATTGGGGGAATCGTA...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTAAGGAGGAGGCCTGGCTaGCTCGCTCCAAGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLRRRPG*LAPRGL
Trigger: GAGACCTCTTGGAGCGAGTCAGCCAGGCCTCCTCCT...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAGGCTGGCTGTGTGGGTaGCACTGGCTAAGGATGCAA +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTGWLCG*HWLRMQ
Trigger: TTGCATCCTTAGCCAGTGTCACCCACACAGCCAGCC...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCAGGGCTGGCTGTTTTTaGCATGTTCCTACAATGCCT +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAARAGCF*HVPTMP
Trigger: AGGCATTGTAGGAACATGTCAAAAACAGCCAGCCCT...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGTTTAGTTGTAAGAGCTaGTGTACAGCCAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLFSCKS*CTASAR
Trigger: CCTGGCACTGGCTGTACATCAGCTCTTACAACTAAA...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCGAACTCTTAAATCCTaGTGTGTGCGAGCACCACCC +
Preference number: 4 (lower is better)
Translates to: RACGWAQTRETEVLAPGRRTLKS*CVRAPP
Trigger: GGGTGGTGCTCGCACACAGCAGGATTTAAGAGTTCG...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CTGGTCAACCTTCTTCCAGCCTCTGCCTGGCTGAAGTCCAAAGCATGTAGTGTTGGCACACCTCCAGTTTaGCCCTTCCGGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LVNLLPASAWLKSKACSVGTPPV*PFRLQL
Trigger: CAGCTGCAGCCGGAAGGGGCAAACTGGAGGTGTGCC...AACACTACATGCTTTGGACTTCAGCCAGGCAGAGGCTGGAAGAAGGTTGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCGAGTATATGTCTTCATaGTGTGGCTCAGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPEYMSS*CGSGSA
Trigger: AGCAGAACCTGAGCCACAGCATGAAGACATATACTC...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGAGTGGGATCTCCATTTaGTGGATGGAAGAAGATGGC +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLSGISI*WMEEDG
Trigger: GCCATCTTCTTCCATCCAGCAAATGGAGATCCCACT...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGGCCCAGGTCCGATTCTaGTGGTGGAGGTGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGAQVRF*WWRWGY
Trigger: GTACCCCCACCTCCACCAGCAGAATCGGACCTGGGC...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACGAGTCTCGGGACAGCTaGCTGTACAGGTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHESRDS*LYRLSW
Trigger: CCAGGACAACCTGTACAGGCAGCTGTCCCGAGACTC...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACTGCAGACCTGGTGGCTaGAGGGCGCTGGCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHCRPGG*RALAVW
Trigger: CCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCA...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACCTGTCTTCGATCCGGTaGTTCCTCGCTCCCTCCATC +
Preference number: 4 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHLSSIR*FLAPSI
Trigger: GATGGAGGGAGCGAGGAACCACCGGATCGAAGACAG...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR CCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCGCTGTATTGGTCACCTaGCTGAACTTCTGTGACTTT +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPAVLVT*LNFCDF
Trigger: AAAGTCACAGAAGTTCAGCCAGGTGACCAATACAGC...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATCCTAATGCACACTGCAGACCTGGTGGCTGCAGGGCGCTGGCGGTCTGGGGAGAACAGGAGTCCATGCTaGATTTTTGAGACTGCCAAG +
Preference number: 4 (lower is better)
Translates to: ILMHTADLVAAGRWRSGENRSPC*IFETAK
Trigger: CTTGGCAGTCTCAAAAATCCAGCATGGACTCCTGTT...CTCCCCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ACGGTGCTTGAATGGACGGCTGGGCTGGGCTGGTTACTTCTCACAATCTGGGCCCCAAGTGGGCAGAGCTaGTGGCTGCTACTGAATTTG +
Preference number: 4 (lower is better)
Translates to: TVLEWTAGLGWLLLTIWAPSGQS*WLLLNL
Trigger: CAAATTCAGTAGCAGCCACCAGCTCTGCCCACTTGG...GGCCCAGATTGTGAGAAGTAACCAGCCCAGCCCAGCCGTCCATTCAAGCACCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCTTTAGTTTTCCCTCTTaGCGGGAAAACCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPFSFPS*RENQKA
Trigger: TGCCTTCTGGTTTTCCCGCCAAGAGGGAAAACTAAA...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCAAGACGCCAGTGCCATaGAAAGACCTTCTGTGCTAT +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGKTPVP*KDLLCY
Trigger: ATAGCACAGAAGGTCTTTCCATGGCACTGGCGTCTT...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGAAGACGCCAGTGCCATaGAAAGACCTTCTGTGCTAT +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLKTPVP*KDLLCY
Trigger: ATAGCACAGAAGGTCTTTCCATGGCACTGGCGTCTT...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGTGTCAGCATGGTCTGTaGCAGCTCCGTTATCCACCA +
Preference number: 4 (lower is better)
Translates to: RACGWAQTRETEVLAPGRCQHGL*QLRYPP
Trigger: TGGTGGATAACGGAGCTGCCACAGACCATGCTGACA...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTGTCTGGCTTGGAGGTaGCCATCGCCCATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPCLAWR*PSPMWL
Trigger: CAGCCACATGGGCGATGGCCACCTCCAAGCCAGACA...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTACGGGGGAGAGGAGGGTaGGCTCTGGATGACCGGGAG +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLRGRGG*ALDDRE
Trigger: CTCCCGGTCATCCAGAGCCCACCCTCCTCTCCCCCG...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGGATAATGGAGATTTaGGTCTGCCAGGAAGCTGAC +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGWIMEI*VCQEAD
Trigger: GTCAGCTTCCTGGCAGACCCAAATCTCCATTATCCA...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTCTCCATGCTGACAGATaGCGCCTGCACTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPLHADR*RLHSGW
Trigger: CCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAG...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGGTGGAAGATCCTCTTTaGTCAATCCTCCATGCTGAC +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPVEDPL*SILHAD
Trigger: GTCAGCATGGAGGATTGACCAAAGAGGATCTTCCAC...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGGTGGAAGATCCTCTTTaGTCAATCCTCCATGCTGAC +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMVEDPL*SILHAD
Trigger: GTCAGCATGGAGGATTGACCAAAGAGGATCTTCCAC...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACATCAGGGGAACCTAGTTaGCTGGAGGAGCGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTSGEPS*LEERSR
Trigger: TCTGGAGCGCTCCTCCAGCCAACTAGGTTCCCCTGA...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTCGTCCTCCAGCAAATaGCCATTCTGTGCATTGTTG +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMSSSSK*PFCALL
Trigger: CAACAATGCACAGAATGGCCATTTGCTGGAGGACGA...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTCGTCCTCCAGCAAATaGCCATTCTGTGCATTGTTG +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGSSSSK*PFCALL
Trigger: CAACAATGCACAGAATGGCCATTTGCTGGAGGACGA...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCACGAACGGTCTCTTTaGTTTGATAGGGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPHERSL*FDRGCL
Trigger: CAGACATCCCCTATCAAACCAAAGAGACCGTTCGTG...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCGAAAATCTCCTCGTTaGCATCTGAAGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMRKSPR*HLKRGR
Trigger: TCTCCCTCTCTTCAGATGCCAACGAGGAGATTTTCG...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGGGGCATGACCCTGGGTaGAAATATTGGGACTCAGTC +
Preference number: 4 (lower is better)
Translates to: RACGWAQTRETEVLAPGRGHDPG*KYWDSV
Trigger: GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCC...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTGGTGTGCGAGGCTGCTaGGCACTGGGAGCATCAAGA +
Preference number: 4 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPGVRGC*ALGASR
Trigger: TCTTGATGCTCCCAGTGCCCAGCAGCCTCGCACACC...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGTATTGGTCACCTGGCTaGACTTCTGTGACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMYWSPG*TSVTFS
Trigger: AGAGAAAGTCACAGAAGTTCAGCCAGGTGACCAATA...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGTGTGCTTTGAGGATGTaGTGTCCCAGTTCAATAGTC +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPCALRM*CPSSIV
Trigger: GACTATTGAACTGGGACATCACATCCTCAAAGCACA...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCTGTGCTTTGAGGATGTaGTGTCCCAGTTCAATAGTC +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAACALRM*CPSSIV
Trigger: GACTATTGAACTGGGACATCACATCCTCAAAGCACA...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCGCTGGAGATGTAGGCTaGGTCCCGATGCGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVAGDVG*VPMRGR
Trigger: TCTCCCCCGCATCGGGACTCAGCCTACATCTCCAGC...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTCCAACCGGCTCTGGCTaGCTCCTATGTCTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPPTGSG*LLCLLV
Trigger: CACAAGGAGACATAGGAGTCAGCCAGAGCCGGTTGG...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACTGGGTAATAGGATGCTaGCTGGCTGCGTCCGATCTG +
Preference number: 4 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHWVIGC*LAASDL
Trigger: CAGATCGGACGCAGCCAGTCAGCATCCTATTACCCA...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGCAACAAGAACATCAGTaGAAGCGATTGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMQQEHQ*KRLSPG
Trigger: TCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTG...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTGGAGGGGCCACAGCATaGGAATGCGCTGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLGGATA*ECAAAG
Trigger: GCCAGCCGCAGCGCATTCTCATGCTGTGGCCCCTCC...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCCTGAGAAGGCGTCGCTaGTGCCCACCCTGGTCTAGC +
Preference number: 4 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVLRRRR*CPPWSS
Trigger: GCTAGACCAGGGTGGGCATCAGCGACGCCTTCTCAG...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CTGGTCAACCTTCTTCCAGCCTCTGCCTGGCTGAAGTCCAAAGCATGTAGTGTTGAGGCTGAGAGGAACTaGCAGGAGGGAGGCTCATGG +
Preference number: 4 (lower is better)
Translates to: LVNLLPASAWLKSKACSVEAERN*QEGGSW
Trigger: CCATGAGCCTCCCTCCTGTCAGTTCCTCTCAGCCTC...AACACTACATGCTTTGGACTTCAGCCAGGCAGAGGCTGGAAGAAGGTTGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTGGGGACCAAAGGGATTaGGTTGAGCCCCCTCTAACC +
Preference number: 4 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPGDQRD*VEPPLT
Trigger: GGTTAGAGGGGGCTCAACTCAATCCCTTTGGTCCCC...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGGTGGAGATGCCACCTTaGCCAGAGCGGCTTTGGCGA +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGVEMPP*PERLWR
Trigger: TCGCCAAAGCCGCTCTGGGCAAGGTGGCATCTCCAC...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR GCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGAGTCATGAGTGTGTTTaGTGCCTCATCTACAGATGG +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMSHECV*CLIYRW
Trigger: CCATCTGTAGATGAGGCAGCAAACACACTCATGACT...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCCGCATAGCCTCCTCCTaGCGCCTGCGCATTTCCGGA +
Preference number: 4 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVRIASS*RLRISG
Trigger: TCCGGAAATGCGCAGGCGGCAGGAGGAGGCTATGCG...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAAACGAAGGCTCAGCATaGTCTGCAGGTGAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTNEGSA*SAGEVP
Trigger: GGGAACCTCACCTGCAGAGCATGCTGAGCCTTCGTT...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCCCAGTTCAATAGTCTaGTGTCGGTTTAGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMPSSIV*CRFSFP
Trigger: GGGAAAACTAAACCGACAGCAGACTATTGAACTGGG...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGAAAGCTGTTGATCTGTaGTCGCTCTACTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLKAVDL*SLYFLF
Trigger: GAAGAGGAAGTAGAGCGAGCACAGATCAACAGCTTT...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGAAAAGATCAACAATCTaGCAGTGGCCCTGGCGCACT +
Preference number: 4 (lower is better)
Translates to: RACGWAQTRETEVLAPGRKRSTI*QWPWRT
Trigger: AGTGCGCCAGGGCCACTGGCAGATTGTTGATCTTTT...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGTGGCGGCGGTGGCTaGTGTGGCTGCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPGGGGG*CGCCIC
Trigger: ACAGATGCAGCAGCCACAGCAGCCACCGCCGCCACC...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGGAGTATATGTCTTCATaGTGTGGCTCAGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMEYMSS*CGSGSA
Trigger: AGCAGAACCTGAGCCACAGCATGAAGACATATACTC...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCGGTCTTCTGATTAAATaGGACACATCAGGGGAACCT +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGGLLIK*DTSGEP
Trigger: AGGTTCCCCTGATGTGTCGCATTTAATCAGAAGACC...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACACTGGGAGTTGGCGGGTaGGGTTTGATTTCGTTAGGG +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTLGVGG*GLISLG
Trigger: CCCTAACGAAATCAAACCGCACCCGCCAACTCCCAG...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCGTACTGCTGAGTCCGTaGTGTTTTATCTATGATCCC +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGVLLSP*CFIYDP
Trigger: GGGATCATAGATAAAACAGCACGGACTCAGCAGTAC...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CCCCACTGCACGGCTTCACAACTGTGTGGTGTTCAATATATCAGGAGAGAGAACGGGGATGTCTGCCCTTaGCGAGAGTCTCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: PHCTASQLCGVQYIRRENGDVCP*RESRDS
Trigger: GCTGTCCCGAGACTCTCGGCAAGGGCAGACATCCCC...GTTCTCTCTCCTGATATATTGAACACCACACAGTTGTGAAGCCGTGCAGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTTGCAGACCTGGTGGCTaGAGGGCGCTGGCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLCRPGG*RALAVW
Trigger: CCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCA...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGGCTGTATTGGTCACCTaGCTGAACTTCTGTGACTTT +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLAVLVT*LNFCDF
Trigger: AAAGTCACAGAAGTTCAGCCAGGTGACCAATACAGC...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGTTCAAGGGTAGAGGTTaGACTAGTAACAGCCCCATA +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLFKGRG*TSNSPI
Trigger: TATGGGGCTGTTACTAGTCCAACCTCTACCCTTGAA...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGAAGGCAGCAACATTGTaGACAAATTCTGGCACCAAG +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLKAATL*TNSGTK
Trigger: CTTGGTGCCAGAATTTGTCCACAATGTTGCTGCCTT...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACTCCGGAAGGAGGCCATaGGGTCTTGAACACAGGAAC +
Preference number: 4 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHSGRRP*GLEHRN
Trigger: GTTCCTGTGTTCAAGACCCCATGGCCTCCTTCCGGA...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCCTGTCTGGAGGCCAATaGAAACATTTTCAACATCCT +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPLSGGQ*KHFQHP
Trigger: AGGATGTTGAAAATGTTTCCATTGGCCTCCAGACAG...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGAGCCTACAGAACTACTaGACCGGAAGTCAAAAACCT +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPSLQNY*TGSQKP
Trigger: AGGTTTTTGACTTCCGGTCCAGTAGTTCTGTAGGCT...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TCCTGGCCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTGCACTCAGGCTGGCTTaGACATGCTGCACCGGCCTT +
Preference number: 4 (lower is better)
Translates to: SWPVLGLGVERSVYFAESALRLA*TCCTGL
Trigger: AAGGCCGGTGCAGCATGTCCAAGCCAGCCTGAGTGC...AGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGGCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACGAGGGAGAGAGCATGTaGCTGGGCACAGACAAGAGA +
Preference number: 4 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHEGESM*LGTDKR
Trigger: TCTCTTGTCTGTGCCCAGCCACATGCTCTCTCCCTC...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCTGCACACTGCAGACCTaGTGGCTGCAGGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: TYQTHGTGRSQIFIQETACTLQT*WLQGAG
Trigger: GCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCA...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATCCTCTTTGGTCAATCCTCCATGCTGACAGATGGCGCCTGCACTCAGGCTGGCTTCTTCAAAATGCAGTaGCTCCTCAGCGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: ILFGQSSMLTDGACTQAGFFKMQ*LLSERR
Trigger: CCGCCTCTCGCTGAGGAGCCACTGCATTTTGAAGAA...GCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
3UTR CAA 72 bp ACTATTGCTAGATGGAGAGAAGCGAAGGCCTACACTTaGGGAATGCAGCAACGGCCTGGGAGTTGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: TIARWREAKAYT*GMQQRPGSWRV
Trigger: CACCCGCCAACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGGCCTTCGCTTCTCTCCATCTAGCAATAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGTCCATGCTGGATTTTTaGGACTGCCAAGGTTTTATG +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPSMLDF*DCQGFM
Trigger: CATAAAACCTTGGCAGTCTCAAAAATCCAGCATGGA...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGTCCATGCTGGATTTTTaGGACTGCCAAGGTTTTATG +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLSMLDF*DCQGFM
Trigger: CATAAAACCTTGGCAGTCTCAAAAATCCAGCATGGA...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGAAATCAGCAGTCGGCTaGCCTTTATATTTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLKSAVG*PLYLEC
Trigger: ACACTCCAAATATAAAGGTCAGCCGACTGCTGATTT...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGATCGTCCAGTCACACTaGATCAAAAACTTGACAACC +
Preference number: 4 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMIVQSH*IKNLTT
Trigger: GGTTGTCAAGTTTTTGATTCAGTGTGACTGGACGAT...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGATCGTCCAGTCACACTaGATCAAAAACTTGACAACC +
Preference number: 4 (lower is better)
Translates to: SPGSREAASQSAACKGFQIVQSH*IKNLTT
Trigger: GGTTGTCAAGTTTTTGATTCAGTGTGACTGGACGAT...CTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACATGCCAGGAAGCTGACTaGCGCTTGTTTCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTCQEAD*RLFPAD
Trigger: ATCAGCAGGAAACAAGCGTCAGTCAGCTTCCTGGCA...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCAGGCTCCTGTGGGGATaGCGGTGCTTGAATGGACGG +
Preference number: 4 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVRLLWG*RCLNGR
Trigger: CCGTCCATTCAAGCACCGTCATCCCCACAGGAGCCT...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTTGTCCTGGTATGCCTaGGCCACAGGTAGAGTCCGA +
Preference number: 4 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPLSWYA*ATGRVR
Trigger: TCGGACTCTACCTGTGGCTCAGGCATACCAGGACAA...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTAGGAGGGGCCACAGCATaGGAATGCGCTGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PVLGLGVERSVYFAESKLGGATA*ECAAAG
Trigger: GCCAGCCGCAGCGCATTCTCATGCTGTGGCCCCTCC...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AGAGGGGAAGGGGGAGGGCTTGGGTATTCTTTGCCCTGTCCTCCCACAGGAGGGCCTTTTAGTGGAGTATaGCACTCAGTGATGTATCAG +
Preference number: 4 (lower is better)
Translates to: RGEGGGLGYSLPCPPTGGPFSGV*HSVMYQ
Trigger: CTGATACATCACTGAGTGTCATACTCCACTAAAAGG...CCCTCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp ATCCTCTTTGGTCAATCCTCCATGCTGACAGATGGCGCCTGCACTCAGGCTGGCAGACAACAACGGGCATaGCCCTGGGTGGAAATATTG +
Preference number: 4 (lower is better)
Translates to: ILFGQSSMLTDGACTQAGRQQRA*PWVEIL
Trigger: CAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCT...GCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAGAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTAGCTGCACCTCCCAGTaGGCGAGCAGCAGGACCGCA +
Preference number: 4 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLSCTSQ*ASSRTA
Trigger: TGCGGTCCTGCTGCTCGCTCACTGGGAGGTGCAGCT...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGAAAATCACCTGTGAATaGAGTGGAGATCTGGAGCCG +
Preference number: 4 (lower is better)
Translates to: RACGWAQTRETEVLAPGRKITCE*SGDLEP
Trigger: CGGCTCCAGATCTCCACTTCATTCACAGGTGATTTT...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp GAGAAGCGAAGGCCTACACTTTGGGAATGCAGCAACGGCCTGGGAGTTGGCGGGAGTCATGAGTGTGTTTaGTGCCTCATCTACAGATGG +
Preference number: 4 (lower is better)
Translates to: EKRRPTLWECSNGLGVGGSHECV*CLIYRW
Trigger: CCATCTGTAGATGAGGCAGCAAACACACTCATGACT...CCCGCCAACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGGCCTTCGCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR GCA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACTGCGAGCACCACCCATaGTCTGTCTTGGCATTCGTA +
Preference number: 4 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHCEHHP*SVLAFV
Trigger: TACGAATGCCAAGACAGAGCATGGGTGGTGCTCGCA...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACCGCATAGCCTCCTCCTaGCGCCTGCGCATTTCCGGA +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHRIASS*RLRISG
Trigger: TCCGGAAATGCGCAGGCGGCAGGAGGAGGCTATGCG...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ATCCTCTTTGGTCAATCCTCCATGCTGACAGATGGCGCCTGCACTCAGGCTGGCCCTCCCATTCTAGTGTaGCTTCAATGCTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: ILFGQSSMLTDGACTQAGPPILV*LQCSQH
Trigger: ATGCTGGGAGCATTGAAGGCACACTAGAATGGGAGG...GCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAGAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR GCA 90 bp AGAGGGGAAGGGGGAGGGCTTGGGTATTCTTTGCCCTGTCCTCCCACAGGAGGGTGGAAAGACCTTCTGTaGTATAAGAGATCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: RGEGGGLGYSLPCPPTGGWKDLL*YKRSRD
Trigger: GTCTCTGGATCTCTTATAGCACAGAAGGTCTTTCCA...CCCTCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR GCA 90 bp CTGGTCAACCTTCTTCCAGCCTCTGCCTGGCTGAAGTCCAAAGCATGTAGTGTTCAGGTACCCTGCTGCTaGAGCATATCCCAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: LVNLLPASAWLKSKACSVQVPCC*SISQGS
Trigger: ACTCCCCTGGGATATGCTGCAGCAGCAGGGTACCTG...AACACTACATGCTTTGGACTTCAGCCAGGCAGAGGCTGGAAGAAGGTTGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTCCTTGGCCCGTTTCTTaGACAGCAGCACCACAATGC +
Preference number: 4 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPPWPVS*TAAPQC
Trigger: GCATTGTGGTGCTGCTGTGCAAGAAACGGGCCAAGG...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTGGTGGCTGCTGTGGCTaGTGCATCTGTCTACACTCT +
Preference number: 4 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPGGCCG*CICLHS
Trigger: AGAGTGTAGACAGATGCAGCAGCCACAGCAGCCACC...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGGAGTCTCGGGACAGCTaGCTGTACAGGTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGESRDS*LYRLSW
Trigger: CCAGGACAACCTGTACAGGCAGCTGTCCCGAGACTC...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGTGGTTCCAATGTTCTTaGTATCCACTCAATAGTGGC +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLWFQCS*YPLNSG
Trigger: GCCACTATTGAGTGGATAGCAAGAACATTGGAACCA...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CCCCACTGCACGGCTTCACAACTGTGTGGTGTTCAATATATCAGGAGAGAGAACCTGATGTACAGCCAGTaGCAGGCCTGTGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: PHCTASQLCGVQYIRRENLMYSQ*QACAEA
Trigger: AGCCTCGGCACAGGCCTGGCACTGGCTGTACATCAG...GTTCTCTCTCCTGATATATTGAACACCACACAGTTGTGAAGCCGTGCAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGAGAAATTCTTCAAAATaGAGTGGCTCCTCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPRNSSK*SGSSAR
Trigger: TCTCGCTGAGGAGCCACTGCATTTTGAAGAATTTCT...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTTAATAGTGCACGTCTaGAACCCGGACAAGATACAA +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMLIVHV*NPDKIQ
Trigger: TTGTATCTTGTCCGGGTTGCAGACGTGCACTATTAA...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTTCACTCACTGGAAGTaGCGGGACAGCGTAGTCTGG +
Preference number: 4 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPFTHWK*RDSVVW
Trigger: CCAGACTACGCTGTCCCGCCACTTCCAGTGAGTGAA...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTCAACAATCTGCCAGTaGCCCTGGCGCACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGSTICQ*PWRTVL
Trigger: CAGCACAGTGCGCCAGGGCCACTGGCAGATTGTTGA...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTGTCTGGAGGCCAATaGAAACATTTTCAACATCCT +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPLSGGQ*KHFQHP
Trigger: AGGATGTTGAAAATGTTTCCATTGGCCTCCAGACAG...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGATGACCGGGAGCCCCTaGCTGGGCCGGGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQMTGSP*LGRASV
Trigger: GACAGAGGCCCGGCCCAGCCAGGGGCTCCCGGTCAT...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATCCTCTTTGGTCAATCCTCCATGCTGACAGATGGCGCCTGCACTCAGGCTGGCGCCGCTGGGCCATTTTaGATAATGGAGATTTGGGTC +
Preference number: 4 (lower is better)
Translates to: ILFGQSSMLTDGACTQAGAAGPF*IMEIWV
Trigger: GACCCAAATCTCCATTATCCAAAATGGCCCAGCGGC...GCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CCA 90 bp ATCCTAATGCACACTGCAGACCTGGTGGCTGCAGGGCGCTGGCGGTCTGGGGAGAAGACTGGTATTTACTaGCCATTGAATGGGCTACTT +
Preference number: 4 (lower is better)
Translates to: ILMHTADLVAAGRWRSGEKTGIY*PLNGLL
Trigger: AAGTAGCCCATTCAATGGCCAGTAAATACCAGTCTT...CTCCCCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACCGCCTGCACTCAGGCTaGCTTGGACATGCTGCACCG +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHRLHSG*LGHAAP
Trigger: CGGTGCAGCATGTCCAAGCCAGCCTGAGTGCAGGCG...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTATCAGGGGAACCTAGTTaGCTGGAGGAGCGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLSGEPS*LEERSR
Trigger: TCTGGAGCGCTCCTCCAGCCAACTAGGTTCCCCTGA...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAGTAACCTCCTTGAGTTaGAGACACTGGCGACAGCTC +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTVTSLS*RHWRQL
Trigger: GAGCTGTCGCCAGTGTCTCCAACTCAAGGAGGTTAC...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GAGAAGCGAAGGCCTACACTTTGGGAATGCAGCAACGGCCTGGGAGTTGGCGGGAAAGCGATTGTCTCCTaGAAAAAGCTGACCAGTGTG +
Preference number: 4 (lower is better)
Translates to: EKRRPTLWECSNGLGVGGKAIVS*KKLTSV
Trigger: CACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT...CCCGCCAACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGGCCTTCGCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CCA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTATGGCCATCGCCCATGTaGCTGGACCTATCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLWPSPM*LDLSWL
Trigger: GAGCCAAGATAGGTCCAGCCACATGGGCGATGGCCA...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ACGGTGCTTGAATGGACGGCTGGGCTGGGCTGGTTACTTCTCACAATCTGGGCCCCAGACACATGGGACTaGTCGCAGCCAGATTTTTAT +
Preference number: 4 (lower is better)
Translates to: TVLEWTAGLGWLLLTIWAPDTWD*SQPDFY
Trigger: ATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGG...GGCCCAGATTGTGAGAAGTAACCAGCCCAGCCCAGCCGTCCATTCAAGCACCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGGCGAGTGTTTGCTGCTaGGGAAGGGGCAGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGASVCC*GRGSSE
Trigger: TTCAGAGCTGCCCCTTCCCCAGCAGCAAACACTCGC...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GCTCTGCACAGTGGCTCCACCAGCCCCATTGTGCTTGTGTCCAGGCCCCCAGCCTGTGCTCTATTAACTTaGGACTTTAATAGTGCACGT +
Preference number: 4 (lower is better)
Translates to: ALHSGSTSPIVLVSRPPACALLT*DFNSAR
Trigger: ACGTGCACTATTAAAGTCCCAAGTTAATAGAGCACA...GGCTGGGGGCCTGGACACAAGCACAATGGGGCTGGTGGAGCCACTGTGCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCAGATTCAGTGAGCACTaGTTTTGTCCAAGGCATTTC +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGRFSEH*FCPRHF
Trigger: GAAATGCCTTGGACAAAACCAGTGCTCACTGAATCT...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCGCCTATTCCATTTTGTaGCAAAGATTCAGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGAYSIL*QRFSEH
Trigger: GTGCTCACTGAATCTTTGCCACAAAATGGAATAGGC...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAAGCCTGATGAGGAACTaGCCTCACTCAGCAGGAATC +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTSLMRN*PHSAGI
Trigger: GATTCCTGCTGAGTGAGGCCAGTTCCTCATCAGGCT...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCGGCTTCACAACTGTGTaGTGTTCAATATATCAGGAG +
Preference number: 4 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGGFTTV*CSIYQE
Trigger: CTCCTGATATATTGAACACCACACAGTTGTGAAGCC...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CAA 72 bp GAATGCAGCAACGGCCTGGGAGTTGGCGGGTGCGGTTaGATTTCGTTAGGGTTGACACTGATAGGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: ECSNGLGVGGCG*ISLGLTLIGLL
Trigger: CAGAAGACCTATCAGTGTCAACCCTAACGAAATCAAACCGCACCCGCCAACTCCCAGGCCGTTGCTGCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp ATCCTCTTTGGTCAATCCTCCATGCTGACAGATGGCGCCTGCACTCAGGCTGGCGACTTATCCGCTGGGTaGTTGCTGAGGTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: ILFGQSSMLTDGACTQAGDLSAG*LLRSDF
Trigger: AAAATCAGACCTCAGCAATCACCCAGCGGATAAGTC...GCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACGTTATTCTGGATCTCTaGGCTGCTGTGTATCCGGTG +
Preference number: 4 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHVILDL*AAVYPV
Trigger: CACCGGATACACAGCAGCTCAGAGATCCAGAATAAC...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CCTGGATCGGGTGGGCTCACTGGGGTAACCTCCTTGAGTTGGAGACACTGGCGAACTGAATCAAAAACTTaGCAACCTCCAGATGACCTC +
Preference number: 4 (lower is better)
Translates to: PGSGGLTGVTSLSWRHWRTESKT*QPPDDL
Trigger: GAGGTCATCTGGAGGTTGTCAAGTTTTTGATTCAGT...TCGCCAGTGTCTCCAACTCAAGGAGGTTACCCCAGTGAGCCCACCCGATCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACTCAAACAAGCCCAGCTaGGGGCTGTCAATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHSNKPS*GLSILL
Trigger: AAGAAGGATTGACAGCCCTCAGCTGGGCTTGTTTGA...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTCGATCATGGCCCCATaGTCTACCAGGAACTGGACC +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGSIMAP*STRNWT
Trigger: GGTCCAGTTCCTGGTAGATCATGGGGCCATGATCGA...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACTCCGGCAACTGCTGCTaGGGCTGCGGTGGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADSGNCC*GCGGGG
Trigger: ACCGCCGCCACCGCAGCCTCAGCAGCAGTTGCCGGA...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACGGGCTGGCCCGATACTaGGGGCCTCTCCGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADGLARY*GPLRRG
Trigger: CCCTCTCCGGAGAGGCCCTCAGTATCGGGCCAGCCC...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACACGACAGCTCGTCACATaGCCTCTCATATGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTRQLVT*PLICRF
Trigger: AAACCTGCATATGAGAGGTCATGTGACGAGCTGTCG...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTCTGGAGACGTGGGACTaGGGACGGTGTCCACAGATG +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPLETWD*GRCPQM
Trigger: CATCTGTGGACACCGTCCTCAGTCCCACGTCTCCAG...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCACACAGAAACTACATaGGAAATTAAGCCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: SPGSREAASQSAACKGFQHTETT*EIKPEN
Trigger: GTTCTCTGGCTTAATTTCTCATGTAGTTTCTGTGTG...CTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAGGTCAGCCTACCAAATaGCCACGAGACCTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTGQPTK*PRDLED
Trigger: ATCTTCTAGGTCTCGTGGTCATTTGGTAGGCTGACC...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACCTACCCTGGTCTAGCTaGGAAGGCGTCGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHLPWSS*EGVADA
Trigger: GGCATCAGCGACGCCTTCTCAGCTAGACCAGGGTAG...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAACTGGCATGCAGCAGTaGTACCTACTCCCTCTTATG +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTTGMQQ*YLLPLM
Trigger: CATAAGAGGGAGTAGGTATCACTGCTGCATGCCAGT...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCCTTAAAAATGTGTaGTTTGAGGATGTGATGTCC +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAATLKNV*FEDVMS
Trigger: GGACATCACATCCTCAAAGCACACATTTTTAAGGGT...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACATTCTTAAATACTCCTTaGTGCTGGCCGGCCATCGTC +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTFLNTP*CWPAIV
Trigger: GACGATGGCCGGCCAGCAGCAAGGAGTATTTAAGAA...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGAAAGCTGTTGATCTGTaGTCGCTCTACTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RACGWAQTRETEVLAPGRKAVDL*SLYFLF
Trigger: GAAGAGGAAGTAGAGCGAGCACAGATCAACAGCTTT...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACCCATCATCAGGGGAGTaGGGCCCTGCTTGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHPSSGE*GPACLP
Trigger: TGGCAGACAAGCAGGGCCGCACTCCCCTGATGATGG...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGTTCCGGCACCCCACTaGCCTATCCAAAGGGCGCAT +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPVPAPH*PIQRAH
Trigger: ATGCGCCCTTTGGATAGGGCAGTGGGGTGCCGGAAC...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTAGGTGGCGGCGGTGGCTaGTGTGGCTGCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: PVLGLGVERSVYFAESKLGGGGG*CGCCIC
Trigger: ACAGATGCAGCAGCCACAGCAGCCACCGCCGCCACC...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTTGTAGCCTGAGCCCTTaGTGGGGAACTGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPCSLSP*WGTATG
Trigger: CCCTGTGGCAGTTCCCCAGCAAGGGCTCAGGCTACA...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACCTGACAGATGGCGCCTaGACTCAGGCTGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHLTDGA*TQAGLD
Trigger: GTCCAAGCCAGCCTGAGTGCAGGCGCCATCTGTCAG...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp TCCTGGCCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTTTGATAGGGGATGTCTaGCCTTGCCGAGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: SWPVLGLGVERSVYFAESLIGDV*PCRESR
Trigger: CCGAGACTCTCGGCAAGGGCAGACATCCCCTATCAA...AGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGGCCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCGAGGCAGCAGCCGGCTaGCTTTGCAGGTCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: TYQTHGTGRSQIFIQETAEAAAG*LCRSVS
Trigger: AGAAACCGACCTGCAAAGGCAGCCGGCTGCTGCCTC...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGAATTCAGCCAGCAAGTaGTACAAAAACAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMNSASK*YKNKAA
Trigger: AGCTGCTTTGTTTTTGTAGCACTTGCTGGCTGAATT...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACATTTGTACTGATGGGTaGGAGTGTAGAGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHICTDG*ECRAGA
Trigger: AGCCCCTGCTCTACACTCCCACCCATCAGTACAAAT...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGAACAGGAGTCCATGCTaGATTTTTGAGACTGCCAAG +
Preference number: 4 (lower is better)
Translates to: RACGWAQTRETEVLAPGRNRSPC*IFETAK
Trigger: CTTGGCAGTCTCAAAAATCCAGCATGGACTCCTGTT...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATCCTCTTTGGTCAATCCTCCATGCTGACAGATGGCGCCTGCACTCAGGCTGGCGCAGGTCCTGGTCTATaGCTTCATTCTCTTCTAGTC +
Preference number: 4 (lower is better)
Translates to: ILFGQSSMLTDGACTQAGAGPGL*LHSLLV
Trigger: GACTAGAAGAGAATGAAGCCATAGACCAGGACCTGC...GCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAGAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACACCAAATGATCCACCTTaGCCCGTTTCTTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTPNDPP*PVSCTA
Trigger: TGCTGTGCAAGAAACGGGCCAAGGTGGATCATTTGG...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAGCAATGAGGGCCTGTTaGATGGCATGGCTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTAMRAC*MAWLFL
Trigger: TAAGAAGAGCCATGCCATCCAACAGGCCCTCATTGC...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAACAATTTCTGTATGACACCATCTGGGTTTACAGGAAGAGGGCCACTAGAACACCTCGGCGGTTTGGCTaGGCCACTGCCGCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: KQFLYDTIWVYRKRATRTPRRFG*ATAAPC
Trigger: ACAAGGGGCGGCAGTGGCCCAGCCAAACCGCCGAGG...TGTTCTAGTGGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAGAAATTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CCCCACTGCACGGCTTCACAACTGTGTGGTGTTCAATATATCAGGAGAGAGAACTCAACAATCTGCCAGTaGCCCTGGCGCACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: PHCTASQLCGVQYIRRENSTICQ*PWRTVL
Trigger: CAGCACAGTGCGCCAGGGCCACTGGCAGATTGTTGA...GTTCTCTCTCCTGATATATTGAACACCACACAGTTGTGAAGCCGTGCAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGTTGACATCAGCTCCATaGGTGAGTAAAAGATCAACA +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPLTSAP*VSKRST
Trigger: TGTTGATCTTTTACTCACCCATGGAGCTGATGTCAA...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACCTCAGCAGAAGTCTCTaGATCTCACGGTTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHLSRSL*ISRLLG
Trigger: TCCCAACAACCGTGAGATCCAGAGACTTCTGCTGAG...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATAGCCTATTCCATTTTGTGGCAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGCGGGGGAGAGGAGGGTaGGCTCTGGATGACCGGGAG +
Preference number: 4 (lower is better)
Translates to: IAYSILWQRFSEHWFCPRRGRGG*ALDDRE
Trigger: CTCCCGGTCATCCAGAGCCCACCCTCCTCTCCCCCG...CCTTGGACAAAACCAGTGCTCACTGAATCTTTGCCACAAAATGGAATAGGCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGAGCCAAGAGGTGAGCTaGAGATGTAGGCTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGSQEVS*RCRLSP
Trigger: GGGACTCAGCCTACATCTCCAGCTCACCTCTTGGCT...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CCCCACTGCACGGCTTCACAACTGTGTGGTGTTCAATATATCAGGAGAGAGAACGGAAGGGGGAGGGCTTaGGTATTCTTTGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PHCTASQLCGVQYIRRENGRGRA*VFFALS
Trigger: GGACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCC...GTTCTCTCTCCTGATATATTGAACACCACACAGTTGTGAAGCCGTGCAGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGTCTCCTTGTGAAGACTaGTATTTACTGGCCATTGAA +
Preference number: 4 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLSPCED*YLLAIE
Trigger: TTCAATGGCCAGTAAATACCAGTCTTCACAAGGAGA...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCGCACTCAGGCTGGCTTaGACATGCTGCACCGGCCTT +
Preference number: 4 (lower is better)
Translates to: TYQTHGTGRSQIFIQETAALRLA*TCCTGL
Trigger: AAGGCCGGTGCAGCATGTCCAAGCCAGCCTGAGTGC...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTCTCCATGCTGACAGATaGCGCCTGCACTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPLHADR*RLHSGW
Trigger: CCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAG...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTCCATGCTGACAGATaGCGCCTGCACTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: TYQTHGTGRSQIFIQETALHADR*RLHSGW
Trigger: CCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAG...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGGCTGCGTCCGATCTGTaGTGTCTGGCTGTATCTCAC +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGAASDL*CLAVSH
Trigger: GTGAGATACAGCCAGACACCACAGATCGGACGCAGC...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGATCGGGTGGGCTCACTaGGGTAACCTCCTTGAGTTG +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGIGWAH*GNLLEL
Trigger: CAACTCAAGGAGGTTACCCCAGTGAGCCCACCCGAT...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTATGGTCCTGGATCGGGTaGGCTCACTGGGGTAACCTC +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLWSWIG*AHWGNL
Trigger: GAGGTTACCCCAGTGAGCCCACCCGATCCAGGACCA...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACCTGAGGCAGGTTGCCTaGAGACGTGGGACTGAGGAC +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHLRQVA*RRGTED
Trigger: GTCCTCAGTCCCACGTCTCCAGGCAACCTGCCTCAG...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATCCTCTTTGGTCAATCCTCCATGCTGACAGATGGCGCCTGCACTCAGGCTGGCTCGTCCTCCAGCAAATaGCCATTCTGTGCATTGTTG +
Preference number: 4 (lower is better)
Translates to: ILFGQSSMLTDGACTQAGSSSSK*PFCALL
Trigger: CAACAATGCACAGAATGGCCATTTGCTGGAGGACGA...GCCAGCCTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAGAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAGAGAGAGCATGTGGCTaGGCACAGACAAGAGAAACT +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTERACG*AQTRET
Trigger: AGTTTCTCTTGTCTGTGCCCAGCCACATGCTCTCTC...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ACTTACTTACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGACACTGCAGACCTGGTaGCTGCAGGGCGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: TYLLTRHMGLVAARFLFRTLQTW*LQGAGG
Trigger: ACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGT...CCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGTAAGTAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACCTGTATGACACCATCTaGGTTTACAGGAAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHLYDTI*VYRKRA
Trigger: GGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAG...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CTGGTCAACCTTCTTCCAGCCTCTGCCTGGCTGAAGTCCAAAGCATGTAGTGTTAGTAGCTCTGCACAGTaGCTCCACCAGCCCCATTGT +
Preference number: 4 (lower is better)
Translates to: LVNLLPASAWLKSKACSVSSSAQ*LHQPHC
Trigger: ACAATGGGGCTGGTGGAGCCACTGTGCAGAGCTACT...AACACTACATGCTTTGGACTTCAGCCAGGCAGAGGCTGGAAGAAGGTTGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GCGAGAAGGGTTTGTGCTCTATTAACTTGGGACTTTAATAGTGCACGTCTGCAACGTCCAGCGGCAGCCTaGCAAGTCAGCTCAGCGTCG +
Preference number: 4 (lower is better)
Translates to: ARRVCALLTWDFNSARLQRPAAA*QVSSAS
Trigger: CGACGCTGAGCTGACTTGCCAGGCTGCCGCTGGACG...TTGCAGACGTGCACTATTAAAGTCCCAAGTTAATAGAGCACAAACCCTTCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTCAGAGTAGGTCTACCTaGAAAAATGAGCGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPQSRST*KNERGA
Trigger: AGCGCCGCGCTCATTTTTCCAGGTAGACCTACTCTG...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACGACTTATCCGCTGGGTaGTTGCTGAGGTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHDLSAG*LLRSDF
Trigger: AAAATCAGACCTCAGCAATCACCCAGCGGATAAGTC...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACGCTGGTGGCTGCTACTaGATTTGGCCGTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHAGGCY*IWPWHE
Trigger: CTCATGCCACGGCCAAATTCAGTAGCAGCCACCAGC...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCAGCATGCTCTGCAGGTaGGGTTCCCGAAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: TYQTHGTGRSQIFIQETASMLCR*GSRRSC
Trigger: GCAGCTTCTTCGGGAACCTCACCTGCAGAGCATGCT...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TCTCCTGCCCCAACAAGCTCTGGTTGGCATATTCTAGTCAAAAACAACTGGCATCCTCGGAGTGCAGCATaGACCAAAGCACACTGCCCG +
Preference number: 4 (lower is better)
Translates to: SPAPTSSGWHILVKNNWHPRSAA*TKAHCP
Trigger: CGGGCAGTGTGCTTTGGTTCATGCTGCACTCCGAGG...ATGCCAGTTGTTTTTGACTAGAATATGCCAACCAGAGCTTGTTGGGGCAGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAGGTCTGCCAGGAAGCTaGCTGACGCTTGTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLGLPGS*LTLVSC
Trigger: GCAGGAAACAAGCGTCAGTCAGCTTCCTGGCAGACC...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGGGGGATGACGGTGCTTaGATGGACGGCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQGDDGA*MDGWAG
Trigger: CCCAGCCCAGCCGTCCATTCAAGCACCGTCATCCCC...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACATACGATTCCCCCAATTaGCCCTTGATAAACCAACCG +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTYDSPN*PLINQP
Trigger: CGGTTGGTTTATCAAGGGTCAATTGGGGGAATCGTA...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACGACGGTGTCCACAGATaGCACTGCCCAGGTCCGATT +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHDGVHR*HCPGPI
Trigger: AATCGGACCTGGGCAGTGTCATCTGTGGACACCGTC...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CCTGGATCGGGTGGGCTCACTGGGGTAACCTCCTTGAGTTGGAGACACTGGCGATCTAATTTCCTTGGCTaGCTGCAATATTTAAAGGGC +
Preference number: 4 (lower is better)
Translates to: PGSGGLTGVTSLSWRHWRSNFLG*LQYLKG
Trigger: GCCCTTTAAATATTGCAGTCAGCCAAGGAAATTAGA...TCGCCAGTGTCTCCAACTCAAGGAGGTTACCCCAGTGAGCCCACCCGATCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACGGTCTTTCTTCACCCTaGAACAGTTTTTGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHGLSSP*NSFCCV
Trigger: GACGCAGCAAAAACTGTTTCAGGGTGAAGAAAGACC...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCTACCCTGGTCTAGCTaGGAAGGCGTCGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLLPWSS*EGVADA
Trigger: GGCATCAGCGACGCCTTCTCAGCTAGACCAGGGTAG...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACATGGAGAGAGGACGCTaGTGCCTACCCTGGTCTAGC +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHMERGR*CLPWSS
Trigger: GCTAGACCAGGGTAGGCATCAGCGTCCTCTCTCCAT...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCCAGCCTCTGCCTGGCTaGAGTCCAAAGCATGTAGTG +
Preference number: 4 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVQPLPG*SPKHVV
Trigger: CACTACATGCTTTGGACTTCAGCCAGGCAGAGGCTG...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACGTCTACCTGGAAAAATaGGCGCGGCGCTGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHVYLEK*ARRWPD
Trigger: ATCAGGCCAGCGCCGCGCTCATTTTTCCAGGTAGAC...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACACATCCTGTACTTCCATaGTGTATTGGTCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTHPVLP*CIGHLA
Trigger: AGCCAGGTGACCAATACAGCATGGAAGTACAGGATG...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ATCCTAATGCACACTGCAGACCTGGTGGCTGCAGGGCGCTGGCGGTCTGGGGAGATCCTAATTCTTTACTaGTTTCCCCAGCATATTTTG +
Preference number: 4 (lower is better)
Translates to: ILMHTADLVAAGRWRSGEILILY*FPQHIL
Trigger: CAAAATATGCTGGGGAAAGCAGTAAAGAATTAGGAT...CTCCCCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCACGCATAGCCTCCTCCTaGCGCCTGCGCATTTCCGGA +
Preference number: 4 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPRIASS*RLRISG
Trigger: TCCGGAAATGCGCAGGCGGCAGGAGGAGGCTATGCG...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp TCCTGGCCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTTCTGGATCTCTGAGCTaGTGTGTATCCGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SWPVLGLGVERSVYFAESSGSLS*CVSGAG
Trigger: TCCTGCACCGGATACACAGCAGCTCAGAGATCCAGA...AGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGGCCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCGTTTGGCTGGGCCACTaGCGCCCCTTGTTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLVWLGH*RPLFQE
Trigger: CTCTTGGAACAAGGGGCGGCAGTGGCCCAGCCAAAC...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTGTTTGGCTGGGCCACTaGCGCCCCTTGTTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLVWLGH*RPLFQE
Trigger: CTCTTGGAACAAGGGGCGGCAGTGGCCCAGCCAAAC...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCATCATCAGGGGAGTaGGGCCCTGCTTGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLPSSGE*GPACLP
Trigger: TGGCAGACAAGCAGGGCCGCACTCCCCTGATGATGG...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCCTGGGAGTTGGCGGGTaGGGTTTGATTTCGTTAGGG +
Preference number: 4 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVLGVGG*GLISLG
Trigger: CCCTAACGAAATCAAACCGCACCCGCCAACTCCCAG...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCCAAATGGCCATTCTGTaGATTGTTGGTTTTGTTATA +
Preference number: 4 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPQMAIL*IVGFVI
Trigger: TATAACAAAACCAACAATGCACAGAATGGCCATTTG...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGAATCCTAATGCACACTaGAGACCTGGTGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGNPNAH*RPGGCR
Trigger: CCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGATT...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCTTGCTGTCTATCTCATaGCCCCACCCAGGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVLLSIS*PHPGLQ
Trigger: TTGCAGCCCTGGGTGGGGGCATGAGATAGACAGCAA...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTACCAGTGCCAGGCCTGTaGCGAGGCTTTGGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLPVPGL*RGFGSN
Trigger: ATTGGAACCAAAGCCTCGGCACAGGCCTGGCACTGG...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CTGGTCAACCTTCTTCCAGCCTCTGCCTGGCTGAAGTCCAAAGCATGTAGTGTTTCTCTCCCGAGGGGATaGCGCTGTTCTTTGCTACAA +
Preference number: 4 (lower is better)
Translates to: LVNLLPASAWLKSKACSVSLPRG*RCSLLQ
Trigger: TTGTAGCAAAGAACAGCGGCATCCCCTCGGGAGAGA...AACACTACATGCTTTGGACTTCAGCCAGGCAGAGGCTGGAAGAAGGTTGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCTCAGGGTGGCTCACCTaGTGTGAGGCTTTGGACACC +
Preference number: 4 (lower is better)
Translates to: TYQTHGTGRSQIFIQETASGWLT*CEALDT
Trigger: GGTGTCCAAAGCCTCACAGCAGGTGAGCCACCCTGA...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAGCAGGTCCTGGTCTATaGCTTCATTCTCTTCTAGTC +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTAGPGL*LHSLLV
Trigger: GACTAGAAGAGAATGAAGCCATAGACCAGGACCTGC...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGAAAGGAAGACTGGGTTaGGAACTTCATATTGCACTG +
Preference number: 4 (lower is better)
Translates to: RACGWAQTRETEVLAPGRKGRLG*ELHIAL
Trigger: CAGTGCAATATGAAGTTCCCAACCCAGTCTTCCTTT...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAAGACGCCAGTGCCATaGAAAGACCTTCTGTGCTAT +
Preference number: 4 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHKTPVP*KDLLCY
Trigger: ATAGCACAGAAGGTCTTTCCATGGCACTGGCGTCTT...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACAAGAGGCATCCACGTTaGCCCCGAACTCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHKRHPR*PRTPAA
Trigger: TGCTGCTGGAGTTCGGGGCCAACGTGGATGCCTCTT...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCAAGAGGCATCCACGTTaGCCCCGAACTCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TYQTHGTGRSQIFIQETAKRHPR*PRTPAA
Trigger: TGCTGCTGGAGTTCGGGGCCAACGTGGATGCCTCTT...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTATGTCAGCATGGTCTGTaGCAGCTCCGTTATCCACCA +
Preference number: 4 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLCQHGL*QLRYPP
Trigger: TGGTGGATAACGGAGCTGCCACAGACCATGCTGACA...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGTCTGACAACCTATCTTaGCTCCTTTCTTCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RACGWAQTRETEVLAPGRSDNLS*LLSSEE
Trigger: CTCTTCTGAAGAAAGGAGCCAAGATAGGTTGTCAGA...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389520.8
CDS-3UTR CCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGGATGATCATGATGTCTaGCTTGGAGGTGGCCATCGC +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGDDHDV*LGGGHR
Trigger: GCGATGGCCACCTCCAAGCCAGACATCATGATCATC...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCCCGATCTGTGGTGTCTaGCTGTATCTCACGCCACCT +
Preference number: 4 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVPICGV*LYLTPP
Trigger: AGGTGGCGTGAGATACAGCCAGACACCACAGATCGG...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAAGGTCGGAGTTAGGTTaGAGGTGGAGGAGATACTAT +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTRSELG*RWRRYY
Trigger: ATAGTATCTCCTCCACCTCCAACCTAACTCCGACCT...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCTGGTCCTGGATCGGGTaGGCTCACTGGGGTAACCTC +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLWSWIG*AHWGNL
Trigger: GAGGTTACCCCAGTGAGCCCACCCGATCCAGGACCA...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACACACGAACGGTCTCTTTaGTTTGATAGGGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTHERSL*FDRGCL
Trigger: CAGACATCCCCTATCAAACCAAAGAGACCGTTCGTG...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TCTCCTGCCCCAACAAGCTCTGGTTGGCATATTCTAGTCAAAAACAACTGGCATACCTGCTCATTCGCCTaGACAGGTGAGTGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: SPAPTSSGWHILVKNNWHTCSFA*TGECGW
Trigger: CCACCCGCACTCACCTGTCCAGGCGAATGAGCAGGT...ATGCCAGTTGTTTTTGACTAGAATATGCCAACCAGAGCTTGTTGGGGCAGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGTCTAACCAGACTTTCTaGTTAGCGATTAGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPSNQTF*LAISKR
Trigger: TCTTTTGCTAATCGCTAACCAGAAAGTCTGGTTAGA...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp TCCTGGCCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAACCCAGACGAGTCATaGGTGTGTTTGCTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: SWPVLGLGVERSVYFAESNPDES*VCLLPH
Trigger: ATGAGGCAGCAAACACACTCATGACTCGTCTGGGTT...AGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGGCCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CTGGTCAACCTTCTTCCAGCCTCTGCCTGGCTGAAGTCCAAAGCATGTAGTGTTCTGGCTGAACTTCTGTaGCTTTCTCTCCAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LVNLLPASAWLKSKACSVLAELL*LSLQGG
Trigger: TCCTCCTTGGAGAGAAAGTCACAGAAGTTCAGCCAG...AACACTACATGCTTTGGACTTCAGCCAGGCAGAGGCTGGAAGAAGGTTGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp CCCCACTGCACGGCTTCACAACTGTGTGGTGTTCAATATATCAGGAGAGAGAACCCGCTGGGTGATTGCTaGGGTCTGATTTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: PHCTASQLCGVQYIRRENPLGDC*GLIFIL
Trigger: CAGGATGAAAATCAGACCTCAGCAATCACCCAGCGG...GTTCTCTCTCCTGATATATTGAACACCACACAGTTGTGAAGCCGTGCAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTGCTGGTGGCTGCTACTaGATTTGGCCGTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLAGGCY*IWPWHE
Trigger: CTCATGCCACGGCCAAATTCAGTAGCAGCCACCAGC...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTACCTGGCGCACTGTGCTaGATAGTGGCACTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PVLGLGVERSVYFAESKLPGALC*IVALLL
Trigger: GAGGAGCAGTGCCACTATTCAGCACAGTGCGCCAGG...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTTGGAGAAAGGGCAGGTaGGGTGGACTGATAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPWRKGR*GGLIGL
Trigger: CAGACCTATCAGTCCACCTCACCTGCCCTTTCTCCA...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTGCTAGGCCTGTAATGTaGGTTCTGATGAGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPARPVM*VLMSWR
Trigger: TCTCCAACTCATCAGAACTCACATTACAGGCCTAGC...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCCTGATAGCGCACGGGTaGACCAGACTGGGATCTATA +
Preference number: 4 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVLIAHG*TRLGSI
Trigger: TATAGATCCCAGTCTGGTTCACCCGTGCGCTATCAG...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCGACGGTGTCCACAGATaGCACTGCCCAGGTCCGATT +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLDGVHR*HCPGPI
Trigger: AATCGGACCTGGGCAGTGTCATCTGTGGACACCGTC...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGTCTAATTTCCTTGGCTaGCTGCAATATTTAAAGGGC +
Preference number: 4 (lower is better)
Translates to: RACGWAQTRETEVLAPGRSNFLG*LQYLKG
Trigger: GCCCTTTAAATATTGCAGTCAGCCAAGGAAATTAGA...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CTGGTCAACCTTCTTCCAGCCTCTGCCTGGCTGAAGTCCAAAGCATGTAGTGTTGGTCAGCCTACCAAATaGCCACGAGACCTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LVNLLPASAWLKSKACSVGQPTK*PRDLED
Trigger: ATCTTCTAGGTCTCGTGGTCATTTGGTAGGCTGACC...AACACTACATGCTTTGGACTTCAGCCAGGCAGAGGCTGGAAGAAGGTTGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAGTAAAGAAATGCTTCTaGTCTCAGGTTCATGCTCCC +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTVKKCF*SQVHAP
Trigger: GGGAGCATGAACCTGAGATCAGAAGCATTTCTTTAC...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCAGATGCCAGCAGTGCTaGGACCTGGCCAAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVRCQQC*DLAKKQ
Trigger: TTGCTTTTTGGCCAGGTCTCAGCACTGCTGGCATCT...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTAATGGTGAAGCACAAGTaGCATCCACATAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLMVKHK*HPHSPL
Trigger: CAGTGGGCTATGTGGATGTCACTTGTGCTTCACCAT...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAAGTGGTAAACTATGGTaGAGCACAAGTGACATCCAC +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTSGKLW*STSDIH
Trigger: GTGGATGTCACTTGTGCTTCACCATAGTTTACCACT...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACTGCAGGTCGGTTTCTTaGGAAATGGGCAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHCRSVS*EMGSPG
Trigger: TCCTGGGCTGCCCATTTCTCAAGAAACCGACCTGCA...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCTTGAGTGGTCTGTATaGCAAAAGGAGTTGATGAAA +
Preference number: 4 (lower is better)
Translates to: RACGWAQTRETEVLAPGRLEWSV*QKELMK
Trigger: TTTCATCAACTCCTTTTGTCATACAGACCACTCAAG...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp GCGAGAAGGGTTTGTGCTCTATTAACTTGGGACTTTAATAGTGCACGTCTGCAAAAAGGAGGCCACGCCTaGAAAGGCACCTGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: ARRVCALLTWDFNSARLQKGGHA*KGTCPE
Trigger: CTCAGGGCAGGTGCCTTTTCAGGCGTGGCCTCCTTT...TTGCAGACGTGCACTATTAAAGTCCCAAGTTAATAGAGCACAAACCCTTCTCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAACGAAGGCTCAGCATaGTCTGCAGGTGAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLNEGSA*SAGEVP
Trigger: GGGAACCTCACCTGCAGAGCATGCTGAGCCTTCGTT...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGTGGAGAGAGGCCACTaGCACATTCAGGAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPVERGH*HIQERH
Trigger: ATGCCTCTCCTGAATGTGGCAGTGGCCTCTCTCCAC...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGCCTCCCATTCTAGTGTaGCTTCAATGCTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGPPILV*LQCSQH
Trigger: ATGCTGGGAGCATTGAAGGCACACTAGAATGGGAGG...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTAGCTCAGGTACCCTGCTaGTGCAGCATATCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PVLGLGVERSVYFAESKLAQVPC*CSISQG
Trigger: CCCCTGGGATATGCTGCAGCAGCAGGGTACCTGAGC...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CTGGTCAACCTTCTTCCAGCCTCTGCCTGGCTGAAGTCCAAAGCATGTAGTGTTCAGATGACCTCGGAGTaGAGCATGAACCAAAGCACA +
Preference number: 4 (lower is better)
Translates to: LVNLLPASAWLKSKACSVQMTSE*SMNQST
Trigger: TGTGCTTTGGTTCATGCTGCACTCCGAGGTCATCTG...AACACTACATGCTTTGGACTTCAGCCAGGCAGAGGCTGGAAGAAGGTTGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCATAACCCATGCTGGCTaGAGCAATGAGGGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVITHAG*SNEGLL
Trigger: CAACAGGCCCTCATTGCTGCAGCCAGCATGGGTTAT...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCAGGGGAGTGCGGCCCTaGTTGTCTGCCATGTTGACA +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLRGVRP*LSAMLT
Trigger: TGTCAACATGGCAGACAAGCAGGGCCGCACTCCCCT...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp TCTCCTGCCCCAACAAGCTCTGGTTGGCATATTCTAGTCAAAAACAACTGGCATAGGGGAGTGCGGCCCTaGTTGTCTGCCATGTTGACA +
Preference number: 4 (lower is better)
Translates to: SPAPTSSGWHILVKNNWHRGVRP*LSAMLT
Trigger: TGTCAACATGGCAGACAAGCAGGGCCGCACTCCCCT...ATGCCAGTTGTTTTTGACTAGAATATGCCAACCAGAGCTTGTTGGGGCAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTAGCTGCGTTTTGCCCTTaGTCTCGCATAGTAAGCTTC +
Preference number: 4 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLAAFCP*SRIVSF
Trigger: GAAGCTTACTATGCGAGAGCAAGGGCAAAACGCAGC...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACGGCTTGGGTATTCTTTaGCCTGTCCTCCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHGLGIL*PVLPQE
Trigger: CTCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCC...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTACCCTTGCTGGGGAACTaGCACAGGGAGCTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: PVLGLGVERSVYFAESKLPLLGN*HRELRH
Trigger: ATGCCTCAGCTCCCTGTGGCAGTTCCCCAGCAAGGG...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAGTACTGCTGAGTCCGTaGTGTTTTATCTATGATCCC +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTVLLSP*CFIYDP
Trigger: GGGATCATAGATAAAACAGCACGGACTCAGCAGTAC...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCCAAATGGCCATTCTGTaGATTGTTGGTTTTGTTATA +
Preference number: 4 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAAQMAIL*IVGFVI
Trigger: TATAACAAAACCAACAATGCACAGAATGGCCATTTG...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCCGCTTCCCAGTCGGCTaGATGCAAAGGATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVRFPVG*MQRISA
Trigger: TGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCG...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCAACCTCTGAGCCCGCTTaGCTGTTGCCCTGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPTSEPA*LLPWKQ
Trigger: CTGCTTCCAGGGCAACAGGCAAGCGGGCTCAGAGGT...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTCCTTCTTCCAGCCTCTaGCTGGCTGAAGTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPPSSSL*LAEVQS
Trigger: GCTTTGGACTTCAGCCAGGCAGAGGCTGGAAGAAGG...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTAATTTGTACTGATGGGTaGGAGTGTAGAGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLICTDG*ECRAGA
Trigger: AGCCCCTGCTCTACACTCCCACCCATCAGTACAAAT...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACATTGTGGACAAATTCTaGCACCAAGCAAGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHIVDKF*HQASVG
Trigger: GCCTACACTTGCTTGGTGCCAGAATTTGTCCACAAT...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAAGGCAGCAACATTGTaGACAAATTCTGGCACCAAG +
Preference number: 4 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHKAATL*TNSGTK
Trigger: CTTGGTGCCAGAATTTGTCCACAATGTTGCTGCCTT...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTATCCGGAAGGAGGCCATaGGGTCTTGAACACAGGAAC +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLSGRRP*GLEHRN
Trigger: GTTCCTGTGTTCAAGACCCCATGGCCTCCTTCCGGA...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAATACTCCTTGCTGCTaGCCGGCCATCGTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLNTPCC*PAIVQS
Trigger: TGACTGGACGATGGCCGGCCAGCAGCAAGGAGTATT...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCTCAACAATCTGCCAGTaGCCCTGGCGCACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLSTICQ*PWRTVL
Trigger: CAGCACAGTGCGCCAGGGCCACTGGCAGATTGTTGA...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGCGTACTACTGAGAGATaGCCCTTCAAACAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGRTTER*PFKQAQ
Trigger: CTGGGCTTGTTTGAAGGGCCATCTCTCAGTAGTACG...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGCCGGGCCTCTGTCTaGAGGCCAATGGAAACATTT +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPGRASV*RPMETF
Trigger: AAATGTTTCCATTGGCCTCCAGACAGAGGCCCGGCC...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCATTTCAGCTGGAGGGCTaGCCCGATACTGAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPFQLEG*PDTEGL
Trigger: GAGGCCCTCAGTATCGGGCCAGCCCTCCAGCTGAAA...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCAACGGCCTGGGAGTTaGCGGGTGCGGTTTGATTTC +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLQRPGS*RVRFDF
Trigger: GAAATCAAACCGCACCCGCCAACTCCCAGGCCGTTG...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTACGAAGGCCTACACTTTaGGAATGCAGCAACGGCCTG +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLRRPTL*ECSNGL
Trigger: CAGGCCGTTGCTGCATTCCCAAAGTGTAGGCCTTCG...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTACAGGTCCGATTCTGCTaGTGGAGGTGGGGGTACTGC +
Preference number: 4 (lower is better)
Translates to: PVLGLGVERSVYFAESKLQVRFC*WRWGYC
Trigger: GCAGTACCCCCACCTCCACCAGCAGAATCGGACCTG...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAGAGGGAGAGAGCATGTaGCTGGGCACAGACAAGAGA +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLEGESM*LGTDKR
Trigger: TCTCTTGTCTGTGCCCAGCCACATGCTCTCTCCCTC...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAAAGCGATTGTCTCCTaGAAAAAGCTGACCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHKAIVS*KKLTSV
Trigger: CACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TCTCCTGCCCCAACAAGCTCTGGTTGGCATATTCTAGTCAAAAACAACTGGCATTGGCCATCGCCCATGTaGCTGGACCTATCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: SPAPTSSGWHILVKNNWHWPSPM*LDLSWL
Trigger: GAGCCAAGATAGGTCCAGCCACATGGGCGATGGCCA...ATGCCAGTTGTTTTTGACTAGAATATGCCAACCAGAGCTTGTTGGGGCAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGCCTGGGTGGAAATATTaGGACTCAGTCTCATGGTCC +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGPGWKY*DSVSWS
Trigger: GGACCATGAGACTGAGTCCCAATATTTCCACCCAGG...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCAAGGCCACTGGGCTCCTaGCTAGAGGTTGCCGCTAGA +
Preference number: 4 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPRPLGS*LEVAAR
Trigger: TCTAGCGGCAACCTCTAGCCAGGAGCCCAGTGGCCT...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR CAA 72 bp GGGCACCTCTTGCCCCCTGGGATAGCCTATTCCATTTaGTGGCAAAGATTCAGTGAGCACTGGTTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GHLLPPGIAYSI*WQRFSEHWFCP
Trigger: TGGACAAAACCAGTGCTCACTGAATCTTTGCCACAAAATGGAATAGGCTATCCCAGGGGGCAAGAGGTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CAA 72 bp AACCTAGTTGGCTGGAGGAGCGCTCCAGATCTAGTTTaGAGTGACAGACTGGGTAATAGGATGCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: NLVGWRSAPDLV*SDRLGNRMLTG
Trigger: GCCAGTCAGCATCCTATTACCCAGTCTGTCACTCAAAACTAGATCTGGAGCGCTCCTCCAGCCAACTAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp CCCCACTGCACGGCTTCACAACTGTGTGGTGTTCAATATATCAGGAGAGAGAACCCGTTCTTATCCAAATaGTCCACCTTGGCCCGTTTC +
Preference number: 4 (lower is better)
Translates to: PHCTASQLCGVQYIRRENPFLSK*STLARF
Trigger: GAAACGGGCCAAGGTGGATCATTTGGATAAGAACGG...GTTCTCTCTCCTGATATATTGAACACCACACAGTTGTGAAGCCGTGCAGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp CTGGTCAACCTTCTTCCAGCCTCTGCCTGGCTGAAGTCCAAAGCATGTAGTGTTCAGAGAACGTACTACTaGGAGATGGCCCTTCAAACA +
Preference number: 4 (lower is better)
Translates to: LVNLLPASAWLKSKACSVQRTYY*EMALQT
Trigger: TGTTTGAAGGGCCATCTCTCAGTAGTACGTTCTCTG...AACACTACATGCTTTGGACTTCAGCCAGGCAGAGGCTGGAAGAAGGTTGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCTGGAGAAAGGGCAGGTaGGGTGGACTGATAGGTCTG +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLWRKGR*GGLIGL
Trigger: CAGACCTATCAGTCCACCTCACCTGCCCTTTCTCCA...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACTGGCAGGCTGTAGCCTaGGCCCTTGCTGGGGAACTG +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADWQAVA*ALAGEL
Trigger: CAGTTCCCCAGCAAGGGCTCAGGCTACAGCCTGCCA...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGAGGCTCCTGTGGGGATaGCGGTGCTTGAATGGACGG +
Preference number: 4 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQRLLWG*RCLNGR
Trigger: CCGTCCATTCAAGCACCGTCATCCCCACAGGAGCCT...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTAGTCAATCCTCCATGCTaGCAGATGGCGCCTGCACTC +
Preference number: 4 (lower is better)
Translates to: PVLGLGVERSVYFAESKLVNPPC*QMAPAL
Trigger: GAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGAC...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGGCCACCTCGGTATGCTaGGGAAGGTCGCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQATSVC*GRSLWK
Trigger: CTTCCACAGCGACCTTCCTCAGCATACCGAGGTGGC...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTAGACGGTGTCCACAGATaGCACTGCCCAGGTCCGATT +
Preference number: 4 (lower is better)
Translates to: PVLGLGVERSVYFAESKLDGVHR*HCPGPI
Trigger: AATCGGACCTGGGCAGTGTCATCTGTGGACACCGTC...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCACAGACAAGAGAAACTaGAGTCCTGGCTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLTDKRN*SPGSRE
Trigger: CTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGT...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTCAACAAGAACATCAGTaGAAGCGATTGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPQQEHQ*KRLSPG
Trigger: TCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTG...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCGGGAAGGGGCAGCTCTaGAATACAGTACTCGGATCA +
Preference number: 4 (lower is better)
Translates to: TYQTHGTGRSQIFIQETAGKGQL*NTVLGS
Trigger: TGATCCGAGTACTGTATTTCAGAGCTGCCCCTTCCC...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTACCAAAGGGATTGAGTTaGGCCCCCTCTAACCAGACT +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLPKGLS*APSNQT
Trigger: AGTCTGGTTAGAGGGGGCTCAACTCAATCCCTTTGG...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTACATCCTGTACTTCCATaGTGTATTGGTCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLHPVLP*CIGHLA
Trigger: AGCCAGGTGACCAATACAGCATGGAAGTACAGGATG...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACCGAACTCTTAAATCCTaGTGTGTGCGAGCACCACCC +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHRTLKS*CVRAPP
Trigger: GGGTGGTGCTCGCACACAGCAGGATTTAAGAGTTCG...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTATCTGGATCTCTGAGCTaGTGTGTATCCGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLSGSLS*CVSGAG
Trigger: TCCTGCACCGGATACACAGCAGCTCAGAGATCCAGA...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTAATGCTCAGGTACCCTaGTGCTGCAGCATATCCCAG +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPNAQVP*CCSISQ
Trigger: CTGGGATATGCTGCAGCAGCAGGGTACCTGAGCATT...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTTGGCCCGTTTCTTaGACAGCAGCACCACAATGC +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLPWPVS*TAAPQC
Trigger: GCATTGTGGTGCTGCTGTGCAAGAAACGGGCCAAGG...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCTGTGGCTCAGGTTCTaGTTCTTCCGGCAACTGCTG +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLLWLRF*FFRQLL
Trigger: CAGCAGTTGCCGGAAGAAGCAGAACCTGAGCCACAG...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCAGGATGCTGACTGGCTaGGTCCGATCTGTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLRMLTG*VRSVVS
Trigger: AGACACCACAGATCGGACGCAGCCAGTCAGCATCCT...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTCCTACACTTTGGGAATaGAGCAACGGCCTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPPTLWE*SNGLGV
Trigger: AACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGG...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCTTGATAGGGGATGTCTaGCCTTGCCGAGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLLIGDV*PCRESR
Trigger: CCGAGACTCTCGGCAAGGGCAGACATCCCCTATCAA...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ATAGCCTATTCCATTTTGTGGCAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGAGCCCGCTTGCCTGTTaGCCTGGAAGCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: IAYSILWQRFSEHWFCPRSPLAC*PGSSSS
Trigger: AGAGGAGCTGCTTCCAGGGCAACAGGCAAGCGGGCT...CCTTGGACAAAACCAGTGCTCACTGAATCTTTGCCACAAAATGGAATAGGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCACAGTCGCTTTCTGTaGAGATGCCACCTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLHSRFL*RCHLAQ
Trigger: CTGGGCAAGGTGGCATCTCCACAGAAAGCGACTGTG...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR CCA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCGGGACAGCGTAGTCTaGCTCAAAAGCACAGTCGCT +
Preference number: 4 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLRDSVV*LKSTVA
Trigger: AGCGACTGTGCTTTTGAGCCAGACTACGCTGTCCCG...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTTTAGTTTTCCCTCTTaGCGGGAAAACCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPFSFPS*RENQKA
Trigger: TGCCTTCTGGTTTTCCCGCCAAGAGGGAAAACTAAA...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTAAAGAGGCATCCACGTTaGCCCCGAACTCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PVLGLGVERSVYFAESKLKRHPR*PRTPAA
Trigger: TGCTGCTGGAGTTCGGGGCCAACGTGGATGCCTCTT...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACCAACGTGCTCGATCATaGCCCCATGATCTACCAGGA +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHQRARS*PHDLPG
Trigger: TCCTGGTAGATCATGGGGCCATGATCGAGCACGTTG...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAGATGATCATGATGTCTaGCTTGGAGGTGGCCATCGC +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLDDHDV*LGGGHR
Trigger: GCGATGGCCACCTCCAAGCCAGACATCATGATCATC...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTAGGAAGGGGGAGGGCTTaGGTATTCTTTGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PVLGLGVERSVYFAESKLGRGRA*VFFALS
Trigger: GGACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCC...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAACTCATACTTTCAGCTaGAGGGCTGGCCCGATACTG +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLTHTFS*RAGPIL
Trigger: CAGTATCGGGCCAGCCCTCCAGCTGAAAGTATGAGT...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACACTCATACTTTCAGCTaGAGGGCTGGCCCGATACTG +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHTHTFS*RAGPIL
Trigger: CAGTATCGGGCCAGCCCTCCAGCTGAAAGTATGAGT...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTGGATAATGGAGATTTaGGTCTGCCAGGAAGCTGAC +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGWIMEI*VCQEAD
Trigger: GTCAGCTTCCTGGCAGACCCAAATCTCCATTATCCA...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTACGGCTGGGCTGGGCTaGTTACTTCTCACAATCTGG +
Preference number: 4 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLTAGLG*LLLTIW
Trigger: CCAGATTGTGAGAAGTAACCAGCCCAGCCCAGCCGT...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCGGGAACCTAGTTGGCTaGAGGAGCGCTCCAGATCTA +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLGNLVG*RSAPDL
Trigger: TAGATCTGGAGCGCTCCTCCAGCCAACTAGGTTCCC...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTAAGGTCGGAGTTAGGTTaGAGGTGGAGGAGATACTAT +
Preference number: 4 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLRSELG*RWRRYY
Trigger: ATAGTATCTCCTCCACCTCCAACCTAACTCCGACCT...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAATATGCAGGTTTCAGTaGGATCTCCATTTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTICRFQ*DLHLLD
Trigger: ATCCAGCAAATGGAGATCCCACTGAAACCTGCATAT...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGTAACCTCCTTGAGTTaGAGACACTGGCGACAGCTC +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPVTSLS*RHWRQL
Trigger: GAGCTGTCGCCAGTGTCTCCAACTCAAGGAGGTTAC...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCTGAAACAGGTCCGATTCTGCTaGTGGAGGTGGGGGTACTGC +
Preference number: 4 (lower is better)
Translates to: EILGLSLMVPRDSNLLLKQVRFC*WRWGYC
Trigger: GCAGTACCCCCACCTCCACCAGCAGAATCGGACCTG...TTTCAGAAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TCCTGGCCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTCACGAACGGTCTCTTTaGTTTGATAGGGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: SWPVLGLGVERSVYFAESHERSL*FDRGCL
Trigger: CAGACATCCCCTATCAAACCAAAGAGACCGTTCGTG...AGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGGCCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATAGCCTATTCCATTTTGTGGCAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGGAGAAACTGAAGTCCTaGCTCCCGGGAGGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: IAYSILWQRFSEHWFCPREKLKS*LPGGRF
Trigger: GAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTC...CCTTGGACAAAACCAGTGCTCACTGAATCTTTGCCACAAAATGGAATAGGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGGAGAAACTGAAGTCCTaGCTCCCGGGAGGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQEKLKS*LPGGRF
Trigger: GAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTC...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR CAA 72 bp TTTCAGCACAGAGACAAGTCCTGGCCTGTTTTAGGTTaGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: FQHRDKSWPVLG*GVERSVYFAES
Trigger: AGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGGCCAGGACTTGTCTCTGTGCTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
3UTR CAA 72 bp AAGGCATTGCATGGTGAAGGGTTCCATGACACGTCTTaGCAGGTAGCTCTTGCCCCTAAGCCCTTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: KALHGEGFHDTS*QVALAPKPFVH
Trigger: ATGAACAAAGGGCTTAGGGGCAAGAGCTACCTGCAAAGACGTGTCATGGAACCCTTCACCATGCAATGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTACTGGCTGAACTTCTGTaGCTTTCTCTCCAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLLAELL*LSLQGG
Trigger: TCCTCCTTGGAGAGAAAGTCACAGAAGTTCAGCCAG...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTACAATGCTCCCAGCATTaGTGGCCTGGAAGATATGCT +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLQCSQH*WPGRYA
Trigger: AGCATATCTTCCAGGCCATCAATGCTGGGAGCATTG...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCAAGGCAAGTAACGTGTaGCCACTCCTCGGATCACAG +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLKASNV*PLLGSQ
Trigger: CTGTGATCCGAGGAGTGGTCACACGTTACTTGCCTT...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTATCAAACAAGCCCAGCTaGGGGCTGTCAATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLSNKPS*GLSILL
Trigger: AAGAAGGATTGACAGCCCTCAGCTGGGCTTGTTTGA...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GCGAGAAGGGTTTGTGCTCTATTAACTTGGGACTTTAATAGTGCACGTCTGCAATGTTGGGACACAGCTTaGTGGCCTCGTTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: ARRVCALLTWDFNSARLQCWDTA*WPRSGP
Trigger: AGGACCTGAACGAGGCCATCAAGCTGTGTCCCAACA...TTGCAGACGTGCACTATTAAAGTCCCAAGTTAATAGAGCACAAACCCTTCTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTTGCCAGGAAGCTGACTaGCGCTTGTTTCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLCQEAD*RLFPAD
Trigger: ATCAGCAGGAAACAAGCGTCAGTCAGCTTCCTGGCA...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTCGACAGCTCGTCACATaGCCTCTCATATGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPRQLVT*PLICRF
Trigger: AAACCTGCATATGAGAGGTCATGTGACGAGCTGTCG...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACCACACAGAAACTACATaGGAAATTAAGCCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHHTETT*EIKPEN
Trigger: GTTCTCTGGCTTAATTTCTCATGTAGTTTCTGTGTG...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTACAACAAGAACATCAGTaGAAGCGATTGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLQQEHQ*KRLSPG
Trigger: TCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTG...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGCATTTCTGCAGTAGAAAAATACTGAGAAGGCGTCGCTaGTGCCCACCCTGGTCTAGC +
Preference number: 4 (lower is better)
Translates to: QRFSEHWFCPRHFCSRKILRRRR*CPPWSS
Trigger: GCTAGACCAGGGTGGGCATCAGCGACGCCTTCTCAG...TATTTTTCTACTGCAGAAATGCCTTGGACAAAACCAGTGCTCACTGAATCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp TCCTGGCCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTCAAACCACCCAACTGTaGCGCTTCTGGAGTTATAAA +
Preference number: 4 (lower is better)
Translates to: SWPVLGLGVERSVYFAESQTTQL*RFWSYK
Trigger: TTTATAACTCCAGAAGCGTCACAGTTGGGTGGTTTG...AGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGGCCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGATCCTAATTCTTTACTaGTTTCCCCAGCATATTTTG +
Preference number: 4 (lower is better)
Translates to: RACGWAQTRETEVLAPGRILILY*FPQHIL
Trigger: CAAAATATGCTGGGGAAAGCAGTAAAGAATTAGGAT...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTCAGATGACCTCGGAGTaGAGCATGAACCAAAGCACA +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPQMTSE*SMNQST
Trigger: TGTGCTTTGGTTCATGCTGCACTCCGAGGTCATCTG...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCTTAAATACTCCTTGCTaGTGGCCGGCCATCGTCCAG +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLLNTPC*WPAIVQ
Trigger: CTGGACGATGGCCGGCCAGCAGCAAGGAGTATTTAA...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGAGGGGAGTGCGGCCCTaGTTGTCTGCCATGTTGACA +
Preference number: 4 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQRGVRP*LSAMLT
Trigger: TGTCAACATGGCAGACAAGCAGGGCCGCACTCCCCT...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACGCTGCGTTTTGCCCTTaGTCTCGCATAGTAAGCTTC +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHAAFCP*SRIVSF
Trigger: GAAGCTTACTATGCGAGAGCAAGGGCAAAACGCAGC...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR GCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTACTGCGAACTGTCTGCTaGTGCGTTTTGCCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: PVLGLGVERSVYFAESKLLRTVC*CVLPLL
Trigger: GAGCAAGGGCAAAACGCAGCAGCAGACAGTTCGCAG...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp ACTTACTTACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGGGTGGCTGCTGTGGCTaGTGCATCTGTCTACACTCT +
Preference number: 4 (lower is better)
Translates to: TYLLTRHMGLVAARFLFRGGCCG*CICLHS
Trigger: AGAGTGTAGACAGATGCAGCAGCCACAGCAGCCACC...CCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGTAAGTAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp TTCAACATCCTGTTCCAGGTACTCCTCCTCGAATATATCCTGTACAGAGTATATTGTAGCCTGAGCCCTTaGTGGGGAACTGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: FNILFQVLLLEYILYRVYCSLSP*WGTATG
Trigger: CCCTGTGGCAGTTCCCCAGCAAGGGCTCAGGCTACA...ATATACTCTGTACAGGATATATTCGAGGAGGAGTACCTGGAACAGGATGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR GCA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCAAGGATGCTGACTGGCTaGGTCCGATCTGTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPRMLTG*VRSVVS
Trigger: AGACACCACAGATCGGACGCAGCCAGTCAGCATCCT...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCATTGCTGTCTATCTCATaGCCCCACCCAGGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPLLSIS*PHPGLQ
Trigger: TTGCAGCCCTGGGTGGGGGCATGAGATAGACAGCAA...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CCCCACTGCACGGCTTCACAACTGTGTGGTGTTCAATATATCAGGAGAGAGAACTCAAGATCAGAAGCTTaGTGTCTATCTCATGCCCCC +
Preference number: 4 (lower is better)
Translates to: PHCTASQLCGVQYIRRENSRSEA*CLSHAP
Trigger: GGGGGCATGAGATAGACAGCAAGCTTCTGATCTTGA...GTTCTCTCTCCTGATATATTGAACACCACACAGTTGTGAAGCCGTGCAGTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAGGAAAAACGTCTCCTaGCCCAACAAGCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLRKNVS*PNKLWL
Trigger: CAACCAGAGCTTGTTGGGGCAGGAGACGTTTTTCCT...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp ATAGCCTATTCCATTTTGTGGCAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGGTGGGGCATCCCCACTaGACGGCTTCACAACTGTGT +
Preference number: 4 (lower is better)
Translates to: IAYSILWQRFSEHWFCPRVGHPH*TASQLC
Trigger: ACACAGTTGTGAAGCCGTGCAGTGGGGATGCCCCAC...CCTTGGACAAAACCAGTGCTCACTGAATCTTTGCCACAAAATGGAATAGGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp ACTTACTTACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAGTGGGCAGAGCTGGTaGCTGCTACTGAATTTGGCC +
Preference number: 4 (lower is better)
Translates to: TYLLTRHMGLVAARFLFRSGQSW*LLLNLA
Trigger: GGCCAAATTCAGTAGCAGCCACCAGCTCTGCCCACT...CCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGTAAGTAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCATTTCCGGAGTTCCTaGGCAGCTTCCACTGGTGAT +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLHFRSS*AASTGD
Trigger: ATCACCAGTGGAAGCTGCCCAGGAACTCCGGAAATG...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGATTGTGGACAAATTCTaGCACCAAGCAAGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGIVDKF*HQASVG
Trigger: GCCTACACTTGCTTGGTGCCAGAATTTGTCCACAAT...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAGTGAAATGTTATTCTaGATCTCTGAGCTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHSEMLF*ISELLC
Trigger: ACACAGCAGCTCAGAGATCCAGAATAACATTTCACT...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGCGGTCAAAGGAAGACTaGGTTGGGAACTTCATATTG +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGRSKED*VGNFIL
Trigger: CAATATGAAGTTCCCAACCCAGTCTTCCTTTGACCG...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TCCTGGCCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTTTTAGTTTTCCCTCTTaGCGGGAAAACCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SWPVLGLGVERSVYFAESFSFPS*RENQKA
Trigger: TGCCTTCTGGTTTTCCCGCCAAGAGGGAAAACTAAA...AGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGGCCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTACCAAATGATCCACCTTaGCCCGTTTCTTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLPNDPP*PVSCTA
Trigger: TGCTGTGCAAGAAACGGGCCAAGGTGGATCATTTGG...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTAACGGCTGGGCTGGGCTaGTTACTTCTCACAATCTGG +
Preference number: 4 (lower is better)
Translates to: PVLGLGVERSVYFAESKLTAGLG*LLLTIW
Trigger: CCAGATTGTGAGAAGTAACCAGCCCAGCCCAGCCGT...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGCGCCTGCACTCAGGCTaGCTTGGACATGCTGCACCG +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWRLHSG*LGHAAP
Trigger: CGGTGCAGCATGTCCAAGCCAGCCTGAGTGCAGGCG...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GCGAGAAGGGTTTGTGCTCTATTAACTTGGGACTTTAATAGTGCACGTCTGCAACCGATCTGTGGTGTCTaGCTGTATCTCACGCCACCT +
Preference number: 4 (lower is better)
Translates to: ARRVCALLTWDFNSARLQPICGV*LYLTPP
Trigger: AGGTGGCGTGAGATACAGCCAGACACCACAGATCGG...TTGCAGACGTGCACTATTAAAGTCCCAAGTTAATAGAGCACAAACCCTTCTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp AAACAATTTCTGTATGACACCATCTGGGTTTACAGGAAGAGGGCCACTAGAACACAACGGCCTGGGAGTTaGCGGGTGCGGTTTGATTTC +
Preference number: 4 (lower is better)
Translates to: KQFLYDTIWVYRKRATRTQRPGS*RVRFDF
Trigger: GAAATCAAACCGCACCCGCCAACTCCCAGGCCGTTG...TGTTCTAGTGGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAGAAATTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTATCTCCATTTGCTGGATaGAAGAAGATGGCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLSPFAG*KKMAGR
Trigger: CCTTCCGGCCATCTTCTTCCATCCAGCAAATGGAGA...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTATATGATCCCCATGAATaGTGTGGTCCTGGATCGGGT +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLYDPHE*CGPGSG
Trigger: ACCCGATCCAGGACCACACCATTCATGGGGATCATA...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCTATGATCCCCATGAATaGTGTGGTCCTGGATCGGGT +
Preference number: 4 (lower is better)
Translates to: TYQTHGTGRSQIFIQETAYDPHE*CGPGSG
Trigger: ACCCGATCCAGGACCACACCATTCATGGGGATCATA...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCATCGCCCATGTGGCTaGACCTATCTTGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLHRPCG*TYLGSF
Trigger: AAAGGAGCCAAGATAGGTCCAGCCACATGGGCGATG...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTATGGAGTTATAAAAGCTaGAGGCTGAGAGGAACTGAC +
Preference number: 4 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLWSYKS*RLRGTD
Trigger: GTCAGTTCCTCTCAGCCTCCAGCTTTTATAACTCCA...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GCGAGAAGGGTTTGTGCTCTATTAACTTGGGACTTTAATAGTGCACGTCTGCAAACAAGCATCTCAGGGTaGCTCACCTGCTGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: ARRVCALLTWDFNSARLQTSISG*LTCCEA
Trigger: AGCCTCACAGCAGGTGAGCCACCCTGAGATGCTTGT...TTGCAGACGTGCACTATTAAAGTCCCAAGTTAATAGAGCACAAACCCTTCTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CAA 72 bp CTGGGAGTTGGCGGGTGCGGTTTGATTTCGTTAGGGTaGACACTGATAGGTCTTCTGATTAAATGCGACACA +
Preference number: 4 (lower is better)
Translates to: LGVGGCGLISLG*TLIGLLIKCDT
Trigger: TGTGTCGCATTTAATCAGAAGACCTATCAGTGTCAACCCTAACGAAATCAAACCGCACCCGCCAACTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTCCATGCTGGATTTTTaGGACTGCCAAGGTTTTATG +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGSMLDF*DCQGFM
Trigger: CATAAAACCTTGGCAGTCTCAAAAATCCAGCATGGA...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TTCAACATCCTGTTCCAGGTACTCCTCCTCGAATATATCCTGTACAGAGTATATAGCATGCTCTGCAGGTaGGGTTCCCGAAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: FNILFQVLLLEYILYRVYSMLCR*GSRRSC
Trigger: GCAGCTTCTTCGGGAACCTCACCTGCAGAGCATGCT...ATATACTCTGTACAGGATATATTCGAGGAGGAGTACCTGGAACAGGATGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTTCATGTCTCTGCGCTTaGTTAGGAACATGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPSCLCA*LGTWRG
Trigger: ACCTCTCCATGTTCCTAATCAAGCGCAGAGACATGA...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCAAAGGCAAGTAACGTGTaGCCACTCCTCGGATCACAG +
Preference number: 4 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPKASNV*PLLGSQ
Trigger: CTGTGATCCGAGGAGTGGTCACACGTTACTTGCCTT...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTAAAATCAGCAGTCGGCTaGCCTTTATATTTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLKSAVG*PLYLEC
Trigger: ACACTCCAAATATAAAGGTCAGCCGACTGCTGATTT...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGCCTCGGAGTGCAGCATaGACCAAAGCACACTGCCCG +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWPRSAA*TKAHCP
Trigger: CGGGCAGTGTGCTTTGGTTCATGCTGCACTCCGAGG...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGACTGAATCAAAAACTTaGCAACCTCCAGATGACCTC +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGTESKT*QPPDDL
Trigger: GAGGTCATCTGGAGGTTGTCAAGTTTTTGATTCAGT...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACGACTGTCAAAGCTGTTaGTCTGTGCTCGCTCTACTT +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHDCQSC*SVLALL
Trigger: AAGTAGAGCGAGCACAGATCAACAGCTTTGACAGTC...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACCAGAGAACGTACTACTaGGAGATGGCCCTTCAAACA +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHQRTYY*EMALQT
Trigger: TGTTTGAAGGGCCATCTCTCAGTAGTACGTTCTCTG...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCTGAAATGTTGGGACACAGCTTaGTGGCCTCGTTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: EILGLSLMVPRDSNLLLKCWDTA*WPRSGP
Trigger: AGGACCTGAACGAGGCCATCAAGCTGTGTCCCAACA...TTTCAGAAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGCTAGGCCTGTAATGTaGGTTCTGATGAGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPARPVM*VLMSWR
Trigger: TCTCCAACTCATCAGAACTCACATTACAGGCCTAGC...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCGTATTTACTGGCCATTaGATGGGCTACTTGGCCATA +
Preference number: 4 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVVFTGH*MGYLAI
Trigger: TATGGCCAAGTAGCCCATTCAATGGCCAGTAAATAC...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCGACAGCTCGTCACATaGCCTCTCATATGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLRQLVT*PLICRF
Trigger: AAACCTGCATATGAGAGGTCATGTGACGAGCTGTCG...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCAAGGTGGGGGTACTGCTaGGTCCGTGCTGTTTTATCT +
Preference number: 4 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPRWGYC*VRAVLS
Trigger: AGATAAAACAGCACGGACTCAGCAGTACCCCCACCT...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCTGAAAACAGACAAGAGAAACTaGAGTCCTGGCTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: EILGLSLMVPRDSNLLLKTDKRN*SPGSRE
Trigger: CTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGT...TTTCAGAAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTCCTATAGCCTTTCACTaGGAATCCAGAACAATCTTT +
Preference number: 4 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPPIAFH*ESRTIF
Trigger: AAAGATTGTTCTGGATTCTCAGTGAAAGGCTATAGG...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CCCCACTGCACGGCTTCACAACTGTGTGGTGTTCAATATATCAGGAGAGAGAACCAACACTTCAGCCCTTaGGTGGTCTGTATGACAAAA +
Preference number: 4 (lower is better)
Translates to: PHCTASQLCGVQYIRRENQHFSP*VVCMTK
Trigger: TTTTGTCATACAGACCACTCAAGGGCTGAAGTGTTG...GTTCTCTCTCCTGATATATTGAACACCACACAGTTGTGAAGCCGTGCAGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp CAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGCATTTCTGCAGTAGAAAAATAGTGGAGATGCCACCTTaGCCAGAGCGGCTTTGGCGA +
Preference number: 4 (lower is better)
Translates to: QRFSEHWFCPRHFCSRKIVEMPP*PERLWR
Trigger: TCGCCAAAGCCGCTCTGGGCAAGGTGGCATCTCCAC...TATTTTTCTACTGCAGAAATGCCTTGGACAAAACCAGTGCTCACTGAATCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGGCTCAGGTACCCTGCTaGTGCAGCATATCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWAQVPC*CSISQG
Trigger: CCCCTGGGATATGCTGCAGCAGCAGGGTACCTGAGC...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTAAATGCTCAGGTACCCTaGTGCTGCAGCATATCCCAG +
Preference number: 4 (lower is better)
Translates to: PVLGLGVERSVYFAESKLNAQVP*CCSISQ
Trigger: CTGGGATATGCTGCAGCAGCAGGGTACCTGAGCATT...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTTTCTTAAATACTCCTTaGTGCTGGCCGGCCATCGTC +
Preference number: 4 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLFLNTP*CWPAIV
Trigger: GACGATGGCCGGCCAGCAGCAAGGAGTATTTAAGAA...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ACTTACTTACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGATCGCCATAGAAAGCTaGCAGATCCAGTGGGGTACG +
Preference number: 4 (lower is better)
Translates to: TYLLTRHMGLVAARFLFRIAIES*QIQWGT
Trigger: CGTACCCCACTGGATCTGGCAGCTTTCTATGGCGAT...CCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGTAAGTAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp AAACAATTTCTGTATGACACCATCTGGGTTTACAGGAAGAGGGCCACTAGAACACGAACTGTCTGCTGCTaGGTTTTGCCCTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: KQFLYDTIWVYRKRATRTRTVCC*VLPLLS
Trigger: CGAGAGCAAGGGCAAAACGCAGCAGCAGACAGTTCG...TGTTCTAGTGGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAGAAATTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp GAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCTGAAAGGCTTGGGTATTCTTTaGCCTGTCCTCCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: EILGLSLMVPRDSNLLLKGLGIL*PVLPQE
Trigger: CTCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCC...TTTCAGAAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CCCCACTGCACGGCTTCACAACTGTGTGGTGTTCAATATATCAGGAGAGAGAACGGTCTTCTGATTAAATaGGACACATCAGGGGAACCT +
Preference number: 4 (lower is better)
Translates to: PHCTASQLCGVQYIRRENGLLIK*DTSGEP
Trigger: AGGTTCCCCTGATGTGTCGCATTTAATCAGAAGACC...GTTCTCTCTCCTGATATATTGAACACCACACAGTTGTGAAGCCGTGCAGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACGAGTCTCGGGACAGCTaGCTGTACAGGTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADESRDS*LYRLSW
Trigger: CCAGGACAACCTGTACAGGCAGCTGTCCCGAGACTC...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTGGTTCCAATGTTCTTaGTATCCACTCAATAGTGGC +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGWFQCS*YPLNSG
Trigger: GCCACTATTGAGTGGATAGCAAGAACATTGGAACCA...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTACAAAACAAGCGCAGTaGAGAGCCACAGTGACACCT +
Preference number: 4 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLTKQAQ*RATVTP
Trigger: AGGTGTCACTGTGGCTCTGCACTGCGCTTGTTTTGT...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACATTTGGTGTCCAATTATaGGTTCATTTGGTACTGACT +
Preference number: 4 (lower is better)
Translates to: VGCMQRISACGLPPLNTTFGVQL*VHLVLT
Trigger: AGTCAGTACCAAATGAACGCATAATTGGACACCAAA...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp ATAGCCTATTCCATTTTGTGGCAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGTGGCATCCACATGTTTaGGGGAGGCATGTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: IAYSILWQRFSEHWFCPRWHPHV*GRHVGC
Trigger: ACAGCCCACATGCCTCCCCCAAACATGTGGATGCCA...CCTTGGACAAAACCAGTGCTCACTGAATCTTTGCCACAAAATGGAATAGGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACGCAGGTCCTGGTCTATaGCTTCATTCTCTTCTAGTC +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHAGPGL*LHSLLV
Trigger: GACTAGAAGAGAATGAAGCCATAGACCAGGACCTGC...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGATGCTCATCAGTCAGTaGGTGGAGAGAGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQMLISQ*VERGHC
Trigger: GCAGTGGCCTCTCTCCACCCACTGACTGATGAGCAT...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCTGAAAAATACTCCTTGCTGCTaGCCGGCCATCGTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: EILGLSLMVPRDSNLLLKNTPCC*PAIVQS
Trigger: TGACTGGACGATGGCCGGCCAGCAGCAAGGAGTATT...TTTCAGAAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCTGAAATCCACGGTTCCTAGATaGCCTTCGGAAGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: EILGLSLMVPRDSNLLLKSTVPR*PSEAAI
Trigger: GATGGCTGCTTCCGAAGGCCATCTAGGAACCGTGGA...TTTCAGAAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGAGCTGCCAGATCCAGTaGGGTACGGCCATTCTTGTC +
Preference number: 4 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQSCQIQ*GTAILV
Trigger: GACAAGAATGGCCGTACCCCACTGGATCTGGCAGCT...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCTGAAAGGCCGGGCCTCTGTCTaGAGGCCAATGGAAACATTT +
Preference number: 4 (lower is better)
Translates to: EILGLSLMVPRDSNLLLKGRASV*RPMETF
Trigger: AAATGTTTCCATTGGCCTCCAGACAGAGGCCCGGCC...TTTCAGAAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTAACTCATACTTTCAGCTaGAGGGCTGGCCCGATACTG +
Preference number: 4 (lower is better)
Translates to: PVLGLGVERSVYFAESKLTHTFS*RAGPIL
Trigger: CAGTATCGGGCCAGCCCTCCAGCTGAAAGTATGAGT...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGATCGGGTGGGCTCACTaGGGTAACCTCCTTGAGTTG +
Preference number: 4 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQIGWAH*GNLLEL
Trigger: CAACTCAAGGAGGTTACCCCAGTGAGCCCACCCGAT...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTGCAGTGAAAACATATaGGTCTCACTCCAACAAAAC +
Preference number: 4 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPCSENI*VSLQQN
Trigger: GTTTTGTTGGAGTGAGACCCATATGTTTTCACTGCA...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TTCAACATCCTGTTCCAGGTACTCCTCCTCGAATATATCCTGTACAGAGTATATCTGCGGCTGGCTGTGTaGGTGACACTGGCTAAGGAT +
Preference number: 4 (lower is better)
Translates to: FNILFQVLLLEYILYRVYLRLAV*VTLAKD
Trigger: ATCCTTAGCCAGTGTCACCCACACAGCCAGCCGCAG...ATATACTCTGTACAGGATATATTCGAGGAGGAGTACCTGGAACAGGATGTTGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGAAAACTGAGAGACCCTaGGGAGAAGCGGCATCAGCG +
Preference number: 4 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQKTERP*GEAASA
Trigger: CGCTGATGCCGCTTCTCCCCAGGGTCTCTCAGTTTT...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCAATGAAGTGGAGATCTaGAGCCGGCATCTCTTAACT +
Preference number: 4 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVNEVEI*SRHLLT
Trigger: AGTTAAGAGATGCCGGCTCCAGATCTCCACTTCATT...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACTATTGGTCACCTGGCTaGACTTCTGTGACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHYWSPG*TSVTFS
Trigger: AGAGAAAGTCACAGAAGTTCAGCCAGGTGACCAATA...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGGAGGCCATGGGGTCTTaGACACAGGAACGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWEAMGS*TQERRL
Trigger: GAGCCTTCGTTCCTGTGTTCAAGACCCCATGGCCTC...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTACTGAGGGTCTTGAGATaGGAACTGAGTTTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLLRVLR*ELSLPN
Trigger: ATTTGGCAAACTCAGTTCTCATCTCAAGACCCTCAG...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTGAGGGTCTTGAGATaGGAACTGAGTTTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: TYQTHGTGRSQIFIQETALRVLR*ELSLPN
Trigger: ATTTGGCAAACTCAGTTCTCATCTCAAGACCCTCAG...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTTGTGCTTTGAGGATGTaGTGTCCCAGTTCAATAGTC +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPCALRM*CPSSIV
Trigger: GACTATTGAACTGGGACATCACATCCTCAAAGCACA...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAACCTGGCGCACTGTGCTaGATAGTGGCACTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKPGALC*IVALLL
Trigger: GAGGAGCAGTGCCACTATTCAGCACAGTGCGCCAGG...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACTGGAGAAAGGGCAGGTaGGGTGGACTGATAGGTCTG +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADWRKGR*GGLIGL
Trigger: CAGACCTATCAGTCCACCTCACCTGCCCTTTCTCCA...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACGTATTTACTGGCCATTaGATGGGCTACTTGGCCATA +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHVFTGH*MGYLAI
Trigger: TATGGCCAAGTAGCCCATTCAATGGCCAGTAAATAC...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAGCCACCTCGGTATGCTaGGGAAGGTCGCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKATSVC*GRSLWK
Trigger: CTTCCACAGCGACCTTCCTCAGCATACCGAGGTGGC...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCGGTCTTTCTTCACCCTaGAACAGTTTTTGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLGLSSP*NSFCCV
Trigger: GACGCAGCAAAAACTGTTTCAGGGTGAAGAAAGACC...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCTGAAAACATTTCCTCCCACCTaGAGCCAGACATGGACTCAG +
Preference number: 4 (lower is better)
Translates to: EILGLSLMVPRDSNLLLKTFPPT*SQTWTQ
Trigger: CTGAGTCCATGTCTGGCTTCAGGTGGGAGGAAATGT...TTTCAGAAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACCTTTGGACACCGAAATaGAGGTTACCAACACTTCAG +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHLWTPK*RLPTLQ
Trigger: CTGAAGTGTTGGTAACCTTCATTTCGGTGTCCAAAG...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp TCCTGGCCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTACCCTTAAAAATGTGTaGTTTGAGGATGTGATGTCC +
Preference number: 4 (lower is better)
Translates to: SWPVLGLGVERSVYFAESTLKNV*FEDVMS
Trigger: GGACATCACATCCTCAAAGCACACATTTTTAAGGGT...AGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGGCCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGCAGGTACCCTGCTGCTaGAGCATATCCCAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWQVPCC*SISQGS
Trigger: ACTCCCCTGGGATATGCTGCAGCAGCAGGGTACCTG...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ATAGCCTATTCCATTTTGTGGCAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGAATGCTCAGGTACCCTaGTGCTGCAGCATATCCCAG +
Preference number: 4 (lower is better)
Translates to: IAYSILWQRFSEHWFCPRNAQVP*CCSISQ
Trigger: CTGGGATATGCTGCAGCAGCAGGGTACCTGAGCATT...CCTTGGACAAAACCAGTGCTCACTGAATCTTTGCCACAAAATGGAATAGGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACAAAGCTGTTGATCTGTaGTCGCTCTACTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHKAVDL*SLYFLF
Trigger: GAAGAGGAAGTAGAGCGAGCACAGATCAACAGCTTT...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCTGTGGCTCAGGTTCTaGTTCTTCCGGCAACTGCTG +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADLWLRF*FFRQLL
Trigger: CAGCAGTTGCCGGAAGAAGCAGAACCTGAGCCACAG...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACGGCTTGGGTATTCTTTaGCCTGTCCTCCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADGLGIL*PVLPQE
Trigger: CTCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCC...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAGGTCTTCTGATTAAATaGGACACATCAGGGGAACCT +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLGLLIK*DTSGEP
Trigger: AGGTTCCCCTGATGTGTCGCATTTAATCAGAAGACC...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGTACTGCTGAGTCCGTaGTGTTTTATCTATGATCCC +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPVLLSP*CFIYDP
Trigger: GGGATCATAGATAAAACAGCACGGACTCAGCAGTAC...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACTTGATAGGGGATGTCTaGCCTTGCCGAGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADLIGDV*PCRESR
Trigger: CCGAGACTCTCGGCAAGGGCAGACATCCCCTATCAA...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTTTTTATTCAGGAAACTaGCCTTCCTGCAGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLFYSGN*PSCSPS
Trigger: GGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAA...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCAGAAATTCTTCAAAATaGAGTGGCTCCTCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVRNSSK*SGSSAR
Trigger: TCTCGCTGAGGAGCCACTGCATTTTGAAGAATTTCT...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTTTCAAGGGTAGAGGTTaGACTAGTAACAGCCCCATA +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPFKGRG*TSNSPI
Trigger: TATGGGGCTGTTACTAGTCCAACCTCTACCCTTGAA...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACAACAGGAGTCCATGCTaGATTTTTGAGACTGCCAAG +
Preference number: 4 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHNRSPC*IFETAK
Trigger: CTTGGCAGTCTCAAAAATCCAGCATGGACTCCTGTT...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCAAAGGAAGACTGGGTTaGGAACTTCATATTGCACTG +
Preference number: 4 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVKGRLG*ELHIAL
Trigger: CAGTGCAATATGAAGTTCCCAACCCAGTCTTCCTTT...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACATGCTCATCAGTCAGTaGGTGGAGAGAGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADMLISQ*VERGHC
Trigger: GCAGTGGCCTCTCTCCACCCACTGACTGATGAGCAT...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TCTCCTGCCCCAACAAGCTCTGGTTGGCATATTCTAGTCAAAAACAACTGGCATGAGATCCAGAGACCTTaGAGGATGGAGGATGATACA +
Preference number: 4 (lower is better)
Translates to: SPAPTSSGWHILVKNNWHEIQRP*RMEDDT
Trigger: TGTATCATCCTCCATCCTCCAAGGTCTCTGGATCTC...ATGCCAGTTGTTTTTGACTAGAATATGCCAACCAGAGCTTGTTGGGGCAGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GCGAGAAGGGTTTGTGCTCTATTAACTTGGGACTTTAATAGTGCACGTCTGCAACCAAATGATCCACCTTaGCCCGTTTCTTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: ARRVCALLTWDFNSARLQPNDPP*PVSCTA
Trigger: TGCTGTGCAAGAAACGGGCCAAGGTGGATCATTTGG...TTGCAGACGTGCACTATTAAAGTCCCAAGTTAATAGAGCACAAACCCTTCTCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCCTGTCTGGAGGCCAATaGAAACATTTTCAACATCCT +
Preference number: 4 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVLSGGQ*KHFQHP
Trigger: AGGATGTTGAAAATGTTTCCATTGGCCTCCAGACAG...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAATTTCAGCTGGAGGGCTaGCCCGATACTGAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKFQLEG*PDTEGL
Trigger: GAGGCCCTCAGTATCGGGCCAGCCCTCCAGCTGAAA...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCAGCCGCTGGGCCATTTTaGATAATGGAGATTTGGGTC +
Preference number: 4 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPAAGPF*IMEIWV
Trigger: GACCCAAATCTCCATTATCCAAAATGGCCCAGCGGC...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATAGCCTATTCCATTTTGTGGCAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGAATGGACGGCTGGGCTaGGCTGGTTACTTCTCACAA +
Preference number: 4 (lower is better)
Translates to: IAYSILWQRFSEHWFCPRNGRLG*AGYFSQ
Trigger: TTGTGAGAAGTAACCAGCCCAGCCCAGCCGTCCATT...CCTTGGACAAAACCAGTGCTCACTGAATCTTTGCCACAAAATGGAATAGGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGAAGACTGGTATTTACTaGCCATTGAATGGGCTACTT +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGKTGIY*PLNGLL
Trigger: AAGTAGCCCATTCAATGGCCAGTAAATACCAGTCTT...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTCTCCTTGTGAAGACTaGTATTTACTGGCCATTGAA +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGSPCED*YLLAIE
Trigger: TTCAATGGCCAGTAAATACCAGTCTTCACAAGGAGA...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACGCTGCGTCCGATCTGTaGTGTCTGGCTGTATCTCAC +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADAASDL*CLAVSH
Trigger: GTGAGATACAGCCAGACACCACAGATCGGACGCAGC...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTGCAGTGAAAACATATaGGTCTCACTCCAACAAAAC +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGCSENI*VSLQQN
Trigger: GTTTTGTTGGAGTGAGACCCATATGTTTTCACTGCA...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGCATCGCCCATGTGGCTaGACCTATCTTGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQHRPCG*TYLGSF
Trigger: AAAGGAGCCAAGATAGGTCCAGCCACATGGGCGATG...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TCCTGGCCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTCCAACAAGCTCTGGTTaGCATATTCTAGTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: SWPVLGLGVERSVYFAESPTSSG*HILVKN
Trigger: GTTTTTGACTAGAATATGCCAACCAGAGCTTGTTGG...AGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGGCCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp CCCCACTGCACGGCTTCACAACTGTGTGGTGTTCAATATATCAGGAGAGAGAACTTAGTGCAAGAATCCTaGGCCAATGGAACATACAAC +
Preference number: 4 (lower is better)
Translates to: PHCTASQLCGVQYIRRENLVQES*ANGTYN
Trigger: GTTGTATGTTCCATTGGCCCAGGATTCTTGCACTAA...GTTCTCTCTCCTGATATATTGAACACCACACAGTTGTGAAGCCGTGCAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTATCTGGACAACGACCTaGGGTACTGTACATGATTCT +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPIWTTT*GTVHDS
Trigger: AGAATCATGTACAGTACCCCAGGTCGTTGTCCAGAT...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp GAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCTGAAAAACCCAGACGAGTCATaGGTGTGTTTGCTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: EILGLSLMVPRDSNLLLKNPDES*VCLLPH
Trigger: ATGAGGCAGCAAACACACTCATGACTCGTCTGGGTT...TTTCAGAAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAGAGGCCATGGGGTCTTaGACACAGGAACGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKEAMGS*TQERRL
Trigger: GAGCCTTCGTTCCTGTGTTCAAGACCCCATGGCCTC...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGCTGTTACAATTAGTTTaGGCCAAGAAGGAAACTTTC +
Preference number: 4 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGLLQLV*AKKETF
Trigger: GAAAGTTTCCTTCTTGGCTCAAACTAATTGTAACAG...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCTGAGGGTCTTGAGATaGGAACTGAGTTTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLLRVLR*ELSLPN
Trigger: ATTTGGCAAACTCAGTTCTCATCTCAAGACCCTCAG...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACACCTCGGAGTGCAGCATaGACCAAAGCACACTGCCCG +
Preference number: 4 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATPRSAA*TKAHCP
Trigger: CGGGCAGTGTGCTTTGGTTCATGCTGCACTCCGAGG...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS-3UTR TCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCGACTCGGTAACGTCTaGCAACCTATCTTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADRLGNV*QPILAP
Trigger: AGGAGCCAAGATAGGTTGTCAGACGTTACCGAGTCG...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389520.8
CDS-3UTR TCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTAGCTAGGCCTGTAATGTaGGTTCTGATGAGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: PVLGLGVERSVYFAESKLARPVM*VLMSWR
Trigger: TCTCCAACTCATCAGAACTCACATTACAGGCCTAGC...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TTCAACATCCTGTTCCAGGTACTCCTCCTCGAATATATCCTGTACAGAGTATATCTGATAGCGCACGGGTaGACCAGACTGGGATCTATA +
Preference number: 4 (lower is better)
Translates to: FNILFQVLLLEYILYRVYLIAHG*TRLGSI
Trigger: TATAGATCCCAGTCTGGTTCACCCGTGCGCTATCAG...ATATACTCTGTACAGGATATATTCGAGGAGGAGTACCTGGAACAGGATGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR TCA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCAAATGTTGCTGATGGATaGTGGTGGACTGAAGGACTC +
Preference number: 4 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPNVADG*WWTEGL
Trigger: GAGTCCTTCAGTCCACCATCATCCATCAGCAACATT...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGACAGACAAGAGAAACTaGAGTCCTGGCTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWTDKRN*SPGSRE
Trigger: CTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGT...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCCCTATAGCCTTTCACTaGGAATCCAGAACAATCTTT +
Preference number: 4 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVPIAFH*ESRTIF
Trigger: AAAGATTGTTCTGGATTCTCAGTGAAAGGCTATAGG...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGAGACAACAACGGGCATaGCCCTGGGTGGAAATATTG +
Preference number: 4 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQRQQRA*PWVEIL
Trigger: CAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCT...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GCGAGAAGGGTTTGTGCTCTATTAACTTGGGACTTTAATAGTGCACGTCTGCAAAAAGAGGCTGGGGCTTaGGTTAGTCTTGCTATTTGC +
Preference number: 4 (lower is better)
Translates to: ARRVCALLTWDFNSARLQKEAGA*VSLAIC
Trigger: GCAAATAGCAAGACTAACTCAAGCCCCAGCCTCTTT...TTGCAGACGTGCACTATTAAAGTCCCAAGTTAATAGAGCACAAACCCTTCTCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAATGGAGAGAGGACGCTaGTGCCTACCCTGGTCTAGC +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKMERGR*CLPWSS
Trigger: GCTAGACCAGGGTAGGCATCAGCGTCCTCTCTCCAT...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GCGAGAAGGGTTTGTGCTCTATTAACTTGGGACTTTAATAGTGCACGTCTGCAAAGTGCAGAGCCACAGTaGCACCTAGTGGTAAACTAT +
Preference number: 4 (lower is better)
Translates to: ARRVCALLTWDFNSARLQSAEPQ*HLVVNY
Trigger: ATAGTTTACCACTAGGTGTCACTGTGGCTCTGCACT...TTGCAGACGTGCACTATTAAAGTCCCAAGTTAATAGAGCACAAACCCTTCTCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCAGTTCCTTGTACAGATaGCAATCTGTATACATGGGG +
Preference number: 4 (lower is better)
Translates to: TYQTHGTGRSQIFIQETASSLYR*QSVYMG
Trigger: CCCCATGTATACAGATTGTCATCTGTACAAGGAACT...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp CAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGCATTTCTGCAGTAGAAAAATAGTGGAGAGAGGCCACTaGCACATTCAGGAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: QRFSEHWFCPRHFCSRKIVERGH*HIQERH
Trigger: ATGCCTCTCCTGAATGTGGCAGTGGCCTCTCTCCAC...TATTTTTCTACTGCAGAAATGCCTTGGACAAAACCAGTGCTCACTGAATCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTATGGAAAGACCTTCTGTaGTATAAGAGATCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLWKDLL*YKRSRD
Trigger: GTCTCTGGATCTCTTATAGCACAGAAGGTCTTTCCA...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp AAACAATTTCTGTATGACACCATCTGGGTTTACAGGAAGAGGGCCACTAGAACATCTGCTGCTGCGTTTTaGCCTTGCTCTCGCATAGTA +
Preference number: 4 (lower is better)
Translates to: KQFLYDTIWVYRKRATRTSAAAF*PCSRIV
Trigger: TACTATGCGAGAGCAAGGGCAAAACGCAGCAGCAGA...TGTTCTAGTGGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAGAAATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGGGTGGCTGCTGTGGCTaGTGCATCTGTCTACACTCT +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWGGCCG*CICLHS
Trigger: AGAGTGTAGACAGATGCAGCAGCCACAGCAGCCACC...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp TTCAACATCCTGTTCCAGGTACTCCTCCTCGAATATATCCTGTACAGAGTATATAATCCTAATGCACACTaGAGACCTGGTGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FNILFQVLLLEYILYRVYNPNAH*RPGGCR
Trigger: CCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGATT...ATATACTCTGTACAGGATATATTCGAGGAGGAGTACCTGGAACAGGATGTTGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR GCA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCATCAAGATCAGAAGCTTaGTGTCTATCTCATGCCCCC +
Preference number: 4 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPSRSEA*CLSHAP
Trigger: GGGGGCATGAGATAGACAGCAAGCTTCTGATCTTGA...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GTACTAATTAAAATCATCTTGGATTTGGAGGAGACAGAACAGAGACAAAGATGCCCAGTGCCAGGCCTGTaGCGAGGCTTTGGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: VLIKIILDLEETEQRQRCPVPGL*RGFGSN
Trigger: ATTGGAACCAAAGCCTCGGCACAGGCCTGGCACTGG...GCATCTTTGTCTCTGTTCTGTCTCCTCCAAATCCAAGATGATTTTAATTAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTTTCAAGGGTAGAGGTTaGACTAGTAACAGCCCCATA +
Preference number: 4 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLFKGRG*TSNSPI
Trigger: TATGGGGCTGTTACTAGTCCAACCTCTACCCTTGAA...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCATTTCCGGAGTTCCTaGGCAGCTTCCACTGGTGAT +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADHFRSS*AASTGD
Trigger: ATCACCAGTGGAAGCTGCCCAGGAACTCCGGAAATG...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTAAGGCAGCAACATTGTaGACAAATTCTGGCACCAAG +
Preference number: 4 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLKAATL*TNSGTK
Trigger: CTTGGTGCCAGAATTTGTCCACAATGTTGCTGCCTT...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCGCCTGTTGGATGGCATaGCTCTTCTTAAATACTCCT +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLACWMA*LFLNTP
Trigger: AGGAGTATTTAAGAAGAGCCATGCCATCCAACAGGC...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGCGTACTACTGAGAGATaGCCCTTCAAACAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQRTTER*PFKQAQ
Trigger: CTGGGCTTGTTTGAAGGGCCATCTCTCAGTAGTACG...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAACAATTTCTGTATGACACCATCTGGGTTTACAGGAAGAGGGCCACTAGAACACCATTCTTGTCAGCATaGTCTGTGGCAGCTCCGTTA +
Preference number: 4 (lower is better)
Translates to: KQFLYDTIWVYRKRATRTPFLSA*SVAAPL
Trigger: TAACGGAGCTGCCACAGACCATGCTGACAAGAATGG...TGTTCTAGTGGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAGAAATTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGCCATTCTTGTCAGCATaGTCTGTGGCAGCTCCGTTA +
Preference number: 4 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQPFLSA*SVAAPL
Trigger: TAACGGAGCTGCCACAGACCATGCTGACAAGAATGG...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCAGCCTACAGAACTACTaGACCGGAAGTCAAAAACCT +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLSLQNY*TGSQKP
Trigger: AGGTTTTTGACTTCCGGTCCAGTAGTTCTGTAGGCT...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGCATTTCTGCAGTAGAAAAATAGGGAACCTAGTTGGCTaGAGGAGCGCTCCAGATCTA +
Preference number: 4 (lower is better)
Translates to: QRFSEHWFCPRHFCSRKIGNLVG*RSAPDL
Trigger: TAGATCTGGAGCGCTCCTCCAGCCAACTAGGTTCCC...TATTTTTCTACTGCAGAAATGCCTTGGACAAAACCAGTGCTCACTGAATCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAATCAGGGGAACCTAGTTaGCTGGAGGAGCGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKSGEPS*LEERSR
Trigger: TCTGGAGCGCTCCTCCAGCCAACTAGGTTCCCCTGA...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ACTTACTTACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGCGAAAATCTCCTCGTTaGCATCTGAAGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: TYLLTRHMGLVAARFLFRRKSPR*HLKRGR
Trigger: TCTCCCTCTCTTCAGATGCCAACGAGGAGATTTTCG...CCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGTAAGTAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTATCCTACAATGCCTCTTaGAAAATCAATGTAGTGACA +
Preference number: 4 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLSYNAS*KINVVT
Trigger: TGTCACTACATTGATTTTCCAAGAGGCATTGTAGGA...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCACCAGACACATGGGACTaGTCGCAGCCAGATTTTTAT +
Preference number: 4 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPPDTWD*SQPDFY
Trigger: ATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGG...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTAAGCAGTGCTGAGACCTaGCCAAAAAGCAATCTGAGA +
Preference number: 4 (lower is better)
Translates to: PVLGLGVERSVYFAESKLSSAET*PKSNLR
Trigger: TCTCAGATTGCTTTTTGGCCAGGTCTCAGCACTGCT...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ACTTACTTACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGTATTGGTCACCTGGCTaGACTTCTGTGACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TYLLTRHMGLVAARFLFRYWSPG*TSVTFS
Trigger: AGAGAAAGTCACAGAAGTTCAGCCAGGTGACCAATA...CCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGTAAGTAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCTTCTCCATTCTCTGCTaGAAATCCTCCCATTCTAGT +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLFSILC*KSSHSS
Trigger: ACTAGAATGGGAGGATTTTCAGCAGAGAATGGAGAA...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TCTCCTGCCCCAACAAGCTCTGGTTGGCATATTCTAGTCAAAAACAACTGGCATAAATCAGCAGTCGGCTaGCCTTTATATTTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: SPAPTSSGWHILVKNNWHKSAVG*PLYLEC
Trigger: ACACTCCAAATATAAAGGTCAGCCGACTGCTGATTT...ATGCCAGTTGTTTTTGACTAGAATATGCCAACCAGAGCTTGTTGGGGCAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCATCGTCCAGTCACACTaGATCAAAAACTTGACAACC +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLIVQSH*IKNLTT
Trigger: GGTTGTCAAGTTTTTGATTCAGTGTGACTGGACGAT...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACATGCTGGCTGCAGCAATaGGGGCCTGTTGGATGGCAT +
Preference number: 4 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATCWLQQ*GPVGWH
Trigger: ATGCCATCCAACAGGCCCTCATTGCTGCAGCCAGCA...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS-3UTR TCA 90 bp GAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCTGAAACAGAGAACGTACTACTaGGAGATGGCCCTTCAAACA +
Preference number: 4 (lower is better)
Translates to: EILGLSLMVPRDSNLLLKQRTYY*EMALQT
Trigger: TGTTTGAAGGGCCATCTCTCAGTAGTACGTTCTCTG...TTTCAGAAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGCATTTCTGCAGTAGAAAAATAGACACCGAGAGAGGTTaGGGAGGAGAGACACCTTTA +
Preference number: 4 (lower is better)
Translates to: QRFSEHWFCPRHFCSRKIDTERG*GGETPL
Trigger: TAAAGGTGTCTCTCCTCCTCAACCTCTCTCGGTGTC...TATTTTTCTACTGCAGAAATGCCTTGGACAAAACCAGTGCTCACTGAATCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGTGCCAGGAAGCTGACTaGCGCTTGTTTCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWCQEAD*RLFPAD
Trigger: ATCAGCAGGAAACAAGCGTCAGTCAGCTTCCTGGCA...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GTACTAATTAAAATCATCTTGGATTTGGAGGAGACAGAACAGAGACAAAGATGCTGGGTAATAGGATGCTaGCTGGCTGCGTCCGATCTG +
Preference number: 4 (lower is better)
Translates to: VLIKIILDLEETEQRQRCWVIGC*LAASDL
Trigger: CAGATCGGACGCAGCCAGTCAGCATCCTATTACCCA...GCATCTTTGTCTCTGTTCTGTCTCCTCCAAATCCAAGATGATTTTAATTAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGAAAGAGGCTGGGGCTTaGGTTAGTCTTGCTATTTGC +
Preference number: 4 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQKEAGA*VSLAIC
Trigger: GCAAATAGCAAGACTAACTCAAGCCCCAGCCTCTTT...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GCGAGAAGGGTTTGTGCTCTATTAACTTGGGACTTTAATAGTGCACGTCTGCAACACATTTCATCTTCCTaGTGTGAGAGAGAGGGGTAT +
Preference number: 4 (lower is better)
Translates to: ARRVCALLTWDFNSARLQHISSS*CEREGY
Trigger: ATACCCCTCTCTCTCACATCAGGAAGATGAAATGTG...TTGCAGACGTGCACTATTAAAGTCCCAAGTTAATAGAGCACAAACCCTTCTCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp ATAGCCTATTCCATTTTGTGGCAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGATCATTCCATGGCAGTaGAGTAGCAAACAGGGCACA +
Preference number: 4 (lower is better)
Translates to: IAYSILWQRFSEHWFCPRIIPWQ*SSKQGT
Trigger: TGTGCCCTGTTTGCTACTTCACTGCCATGGAATGAT...CCTTGGACAAAACCAGTGCTCACTGAATCTTTGCCACAAAATGGAATAGGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCAATGAGATGATGGGGTaGGGAAACATGAAAGTAACA +
Preference number: 4 (lower is better)
Translates to: TYQTHGTGRSQIFIQETANEMMG*GNMKVT
Trigger: TGTTACTTTCATGTTTCCTCACCCCATCATCTCATT...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACTTAAATCCTGCTGTGTaGGAGCACCACCCATGCTCT +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADLNPAV*EHHPCS
Trigger: AGAGCATGGGTGGTGCTCGCACACAGCAGGATTTAA...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAACAGCAGCACCACAATaGTCAGGTACCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKTAAPQ*SGTLLL
Trigger: CAGCAGCAGGGTACCTGAGCATTGTGGTGCTGCTGT...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCTGAAAAGTGGGATCTCCATTTaGTGGATGGAAGAAGATGGC +
Preference number: 4 (lower is better)
Translates to: EILGLSLMVPRDSNLLLKSGISI*WMEEDG
Trigger: GCCATCTTCTTCCATCCAGCAAATGGAGATCCCACT...TTTCAGAAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp AAACAATTTCTGTATGACACCATCTGGGTTTACAGGAAGAGGGCCACTAGAACAAGTGGGATCTCCATTTaGTGGATGGAAGAAGATGGC +
Preference number: 4 (lower is better)
Translates to: KQFLYDTIWVYRKRATRTSGISI*WMEEDG
Trigger: GCCATCTTCTTCCATCCAGCAAATGGAGATCCCACT...TGTTCTAGTGGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAGAAATTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGCATTTCTGCAGTAGAAAAATACGCTTCCCAGTCGGCTaGATGCAAAGGATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: QRFSEHWFCPRHFCSRKIRFPVG*MQRISA
Trigger: TGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCG...TATTTTTCTACTGCAGAAATGCCTTGGACAAAACCAGTGCTCACTGAATCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCGACATGTTCCTACAATaGCTCTTGGAAAATCAATGT +
Preference number: 4 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVDMFLQ*LLENQC
Trigger: ACATTGATTTTCCAAGAGGCATTGTAGGAACATGTC...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTAATGTTGTGATCCACTaGTTGATGTCTTTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPNVVIH*LMSFLS
Trigger: GGAAAGGAAAGACATCAAGCAGTGGATCACAACATT...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGGATGCCGCTGTTCTTTaGTACAAAACAAGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQDAAVL*YKTSAV
Trigger: CACTGCGCTTGTTTTGTAGCAAAGAACAGCGGCATC...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp GCGAGAAGGGTTTGTGCTCTATTAACTTGGGACTTTAATAGTGCACGTCTGCAATCAAAGAGTTCGTCTTaGACAACTGGCACAGATGCA +
Preference number: 4 (lower is better)
Translates to: ARRVCALLTWDFNSARLQSKSSS*TTGTDA
Trigger: TGCATCTGTGCCAGTTGTGCAAGACGAACTCTTTGA...TTGCAGACGTGCACTATTAAAGTCCCAAGTTAATAGAGCACAAACCCTTCTCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTACCCAGTAAATTGGTATaGAATAAGGCAGGTACATTC +
Preference number: 4 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLPSKLV*NKAGTF
Trigger: GAATGTACCTGCCTTATTGCATACCAATTTACTGGG...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAATTCACTCACTGGAAGTaGCGGGACAGCGTAGTCTGG +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKFTHWK*RDSVVW
Trigger: CCAGACTACGCTGTCCCGCCACTTCCAGTGAGTGAA...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR CCA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCAGCTGTATTGGTCACCTaGCTGAACTTCTGTGACTTT +
Preference number: 4 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPAVLVT*LNFCDF
Trigger: AAAGTCACAGAAGTTCAGCCAGGTGACCAATACAGC...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGCATTTCCGGAGTTCCTaGGCAGCTTCCACTGGTGAT +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWHFRSS*AASTGD
Trigger: ATCACCAGTGGAAGCTGCCCAGGAACTCCGGAAATG...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACGCAATGAGGGCCTGTTaGATGGCATGGCTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADAMRAC*MAWLFL
Trigger: TAAGAAGAGCCATGCCATCCAACAGGCCCTCATTGC...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGCAACGTGCTCGATCATaGCCCCATGATCTACCAGGA +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWQRARS*PHDLPG
Trigger: TCCTGGTAGATCATGGGGCCATGATCGAGCACGTTG...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAGGCCGGGCCTCTGTCTaGAGGCCAATGGAAACATTT +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKGRASV*RPMETF
Trigger: AAATGTTTCCATTGGCCTCCAGACAGAGGCCCGGCC...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGTGGATAATGGAGATTTaGGTCTGCCAGGAAGCTGAC +
Preference number: 4 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQWIMEI*VCQEAD
Trigger: GTCAGCTTCCTGGCAGACCCAAATCTCCATTATCCA...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACGCCGCTGGGCCATTTTaGATAATGGAGATTTGGGTC +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADAAGPF*IMEIWV
Trigger: GACCCAAATCTCCATTATCCAAAATGGCCCAGCGGC...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTTCTCCTTGTGAAGACTaGTATTTACTGGCCATTGAA +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPSPCED*YLLAIE
Trigger: TTCAATGGCCAGTAAATACCAGTCTTCACAAGGAGA...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ATAGCCTATTCCATTTTGTGGCAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGGTGGAAGATCCTCTTTaGTCAATCCTCCATGCTGAC +
Preference number: 4 (lower is better)
Translates to: IAYSILWQRFSEHWFCPRVEDPL*SILHAD
Trigger: GTCAGCATGGAGGATTGACCAAAGAGGATCTTCCAC...CCTTGGACAAAACCAGTGCTCACTGAATCTTTGCCACAAAATGGAATAGGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp ACTTACTTACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGGATACTATTGCTAGATaGAGAGAAGCGAAGGCCTAC +
Preference number: 4 (lower is better)
Translates to: TYLLTRHMGLVAARFLFRDTIAR*REAKAY
Trigger: GTAGGCCTTCGCTTCTCTCCATCTAGCAATAGTATC...CCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGTAAGTAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TCTCCTGCCCCAACAAGCTCTGGTTGGCATATTCTAGTCAAAAACAACTGGCATGAACTACCTCGAATGTaGAAACCAAGCCTGAAAATG +
Preference number: 4 (lower is better)
Translates to: SPAPTSSGWHILVKNNWHELPRM*KPSLKM
Trigger: CATTTTCAGGCTTGGTTTCCACATTCGAGGTAGTTC...ATGCCAGTTGTTTTTGACTAGAATATGCCAACCAGAGCTTGTTGGGGCAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTGAACTACCTCGAATGTaGAAACCAAGCCTGAAAATG +
Preference number: 4 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLELPRM*KPSLKM
Trigger: CATTTTCAGGCTTGGTTTCCACATTCGAGGTAGTTC...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCCTGGGTGGAAATATTaGGACTCAGTCTCATGGTCC +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADPGWKY*DSVSWS
Trigger: GGACCATGAGACTGAGTCCCAATATTTCCACCCAGG...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGCATTTCTGCAGTAGAAAAATATTCTTCAAAATGCAGTaGCTCCTCAGCGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: QRFSEHWFCPRHFCSRKIFFKMQ*LLSERR
Trigger: CCGCCTCTCGCTGAGGAGCCACTGCATTTTGAAGAA...TATTTTTCTACTGCAGAAATGCCTTGGACAAAACCAGTGCTCACTGAATCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCTAGTCAAAAACAACTaGCATGCAGCAGTGATACCT +
Preference number: 4 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLLVKNN*HAAVIP
Trigger: AGGTATCACTGCTGCATGCCAGTTGTTTTTGACTAG...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp GCGAGAAGGGTTTGTGCTCTATTAACTTGGGACTTTAATAGTGCACGTCTGCAAACTGAATCAAAAACTTaGCAACCTCCAGATGACCTC +
Preference number: 4 (lower is better)
Translates to: ARRVCALLTWDFNSARLQTESKT*QPPDDL
Trigger: GAGGTCATCTGGAGGTTGTCAAGTTTTTGATTCAGT...TTGCAGACGTGCACTATTAAAGTCCCAAGTTAATAGAGCACAAACCCTTCTCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAGACACCGAGAGAGGTTaGGGAGGAGAGACACCTTTA +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKDTERG*GGETPL
Trigger: TAAAGGTGTCTCTCCTCCTCAACCTCTCTCGGTGTC...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCTGAAAGTATTTACTGGCCATTaGATGGGCTACTTGGCCATA +
Preference number: 4 (lower is better)
Translates to: EILGLSLMVPRDSNLLLKVFTGH*MGYLAI
Trigger: TATGGCCAAGTAGCCCATTCAATGGCCAGTAAATAC...TTTCAGAAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACAGGGCTGGCTGTTTTTaGCATGTTCCTACAATGCCT +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADRAGCF*HVPTMP
Trigger: AGGCATTGTAGGAACATGTCAAAAACAGCCAGCCCT...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACTTTAGTTGTAAGAGCTaGTGTACAGCCAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADFSCKS*CTASAR
Trigger: CCTGGCACTGGCTGTACATCAGCTCTTACAACTAAA...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGACCTACTCCCTCTTATaGTGGCCAAAAAGAATGGCA +
Preference number: 4 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQTYSLL*WPKRMA
Trigger: TGCCATTCTTTTTGGCCATCATAAGAGGGAGTAGGT...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAATGCGAGCACCACCCATaGTCTGTCTTGGCATTCGTA +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKCEHHP*SVLAFV
Trigger: TACGAATGCCAAGACAGAGCATGGGTGGTGCTCGCA...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ATAGCCTATTCCATTTTGTGGCAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGCCCAGTTCAATAGTCTaGTGTCGGTTTAGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: IAYSILWQRFSEHWFCPRPSSIV*CRFSFP
Trigger: GGGAAAACTAAACCGACAGCAGACTATTGAACTGGG...CCTTGGACAAAACCAGTGCTCACTGAATCTTTGCCACAAAATGGAATAGGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAGATCAACAATCTaGCAGTGGCCCTGGCGCACT +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWKRSTI*QWPWRT
Trigger: AGTGCGCCAGGGCCACTGGCAGATTGTTGATCTTTT...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTAGACAAGAGCGGTTCTaGTATTTTCTAATGAAGACA +
Preference number: 4 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPRQERF*YFLMKT
Trigger: TGTCTTCATTAGAAAATAGCAGAACCGCTCTTGTCT...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAACCAAGTGGGCAGAGCTaGTGGCTGCTACTGAATTTG +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKPSGQS*WLLLNL
Trigger: CAAATTCAGTAGCAGCCACCAGCTCTGCCCACTTGG...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAACAATTTCTGTATGACACCATCTGGGTTTACAGGAAGAGGGCCACTAGAACACGGTCAAAGGAAGACTaGGTTGGGAACTTCATATTG +
Preference number: 4 (lower is better)
Translates to: KQFLYDTIWVYRKRATRTRSKED*VGNFIL
Trigger: CAATATGAAGTTCCCAACCCAGTCTTCCTTTGACCG...TGTTCTAGTGGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAGAAATTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp TTCAACATCCTGTTCCAGGTACTCCTCCTCGAATATATCCTGTACAGAGTATATGAGATCCAGAGACCTTaGAGGATGGAGGATGATACA +
Preference number: 4 (lower is better)
Translates to: FNILFQVLLLEYILYRVYEIQRP*RMEDDT
Trigger: TGTATCATCCTCCATCCTCCAAGGTCTCTGGATCTC...ATATACTCTGTACAGGATATATTCGAGGAGGAGTACCTGGAACAGGATGTTGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CCA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACAAATACTCCTTGCTGCTaGCCGGCCATCGTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATNTPCC*PAIVQS
Trigger: TGACTGGACGATGGCCGGCCAGCAGCAAGGAGTATT...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS-3UTR CCA 90 bp ATAGCCTATTCCATTTTGTGGCAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGGCCTGTTGGATGGCATaGCTCTTCTTAAATACTCCT +
Preference number: 4 (lower is better)
Translates to: IAYSILWQRFSEHWFCPRACWMA*LFLNTP
Trigger: AGGAGTATTTAAGAAGAGCCATGCCATCCAACAGGC...CCTTGGACAAAACCAGTGCTCACTGAATCTTTGCCACAAAATGGAATAGGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTTTGACATCAGCTCCATaGGTGAGTAAAAGATCAACA +
Preference number: 4 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLLTSAP*VSKRST
Trigger: TGTTGATCTTTTACTCACCCATGGAGCTGATGTCAA...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCAAGACTGGTATTTACTaGCCATTGAATGGGCTACTT +
Preference number: 4 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLKTGIY*PLNGLL
Trigger: AAGTAGCCCATTCAATGGCCAGTAAATACCAGTCTT...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGTCTCCATTTGCTGGATaGAAGAAGATGGCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWSPFAG*KKMAGR
Trigger: CCTTCCGGCCATCTTCTTCCATCCAGCAAATGGAGA...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAACAATTTCTGTATGACACCATCTGGGTTTACAGGAAGAGGGCCACTAGAACAAAAGCGATTGTCTCCTaGAAAAAGCTGACCAGTGTG +
Preference number: 4 (lower is better)
Translates to: KQFLYDTIWVYRKRATRTKAIVS*KKLTSV
Trigger: CACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT...TGTTCTAGTGGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAGAAATTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACTGGCTGGACCTATCTTaGCTCCTTTCTTCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADWLDLS*LLSSEE
Trigger: CTCTTCTGAAGAAAGGAGCCAAGATAGGTCCAGCCA...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGCGGTTTCTTGAGAAATaGGCAGCCCAGGAACAGACA +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWRFLEK*AAQEQT
Trigger: TGTCTGTTCCTGGGCTGCCCATTTCTCAAGAAACCG...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CAA 72 bp TTGTCACCTCTGTCCTCCATTTCAGGGTGGTATGAATaGAGTAAGTTTCATCTGAAACATTTCCTCCCACCT +
Preference number: 4 (lower is better)
Translates to: LSPLSSISGWYE*SKFHLKHFLPP
Trigger: AGGTGGGAGGAAATGTTTCAGATGAAACTTACTCAATTCATACCACCCTGAAATGGAGGACAGAGGTGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp AAACAATTTCTGTATGACACCATCTGGGTTTACAGGAAGAGGGCCACTAGAACATTCTCCATTCTCTGCTaGAAATCCTCCCATTCTAGT +
Preference number: 4 (lower is better)
Translates to: KQFLYDTIWVYRKRATRTFSILC*KSSHSS
Trigger: ACTAGAATGGGAGGATTTTCAGCAGAGAATGGAGAA...TGTTCTAGTGGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAGAAATTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp CAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGCATTTCTGCAGTAGAAAAATATACGATTCCCCCAATTaGCCCTTGATAAACCAACCG +
Preference number: 4 (lower is better)
Translates to: QRFSEHWFCPRHFCSRKIYDSPN*PLINQP
Trigger: CGGTTGGTTTATCAAGGGTCAATTGGGGGAATCGTA...TATTTTTCTACTGCAGAAATGCCTTGGACAAAACCAGTGCTCACTGAATCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAATGTTGCTGATGGATaGTGGTGGACTGAAGGACTC +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWNVADG*WWTEGL
Trigger: GAGTCCTTCAGTCCACCATCATCCATCAGCAACATT...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCTGAAACCTTTTAGTGGAGTATaGCACTCAGTGATGTATCAG +
Preference number: 4 (lower is better)
Translates to: EILGLSLMVPRDSNLLLKPFSGV*HSVMYQ
Trigger: CTGATACATCACTGAGTGTCATACTCCACTAAAAGG...TTTCAGAAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp TCTCCTGCCCCAACAAGCTCTGGTTGGCATATTCTAGTCAAAAACAACTGGCATAAAAATAACTCTCTCTaGATCAAACCACCCAACTGT +
Preference number: 4 (lower is better)
Translates to: SPAPTSSGWHILVKNNWHKNNSL*IKPPNC
Trigger: ACAGTTGGGTGGTTTGATTCAGAGAGAGTTATTTTT...ATGCCAGTTGTTTTTGACTAGAATATGCCAACCAGAGCTTGTTGGGGCAGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGCATGAGTGTGTTTGCTaGCTCATCTACAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWHECVC*LIYRWR
Trigger: CCTCCATCTGTAGATGAGGCAGCAAACACACTCATG...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCATCCTAATTCTTTACTaGTTTCCCCAGCATATTTTG +
Preference number: 4 (lower is better)
Translates to: TYQTHGTGRSQIFIQETAILILY*FPQHIL
Trigger: CAAAATATGCTGGGGAAAGCAGTAAAGAATTAGGAT...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCCCAGTTCAATAGTCTaGTGTCGGTTTAGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADPSSIV*CRFSFP
Trigger: GGGAAAACTAAACCGACAGCAGACTATTGAACTGGG...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACATTAAATACTCCTTGCTaGTGGCCGGCCATCGTCCAG +
Preference number: 4 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATLNTPC*WPAIVQ
Trigger: CTGGACGATGGCCGGCCAGCAGCAAGGAGTATTTAA...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS-3UTR GCA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACAATAACCCATGCTGGCTaGAGCAATGAGGGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATITHAG*SNEGLL
Trigger: CAACAGGCCCTCATTGCTGCAGCCAGCATGGGTTAT...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS-3UTR GCA 90 bp TTCAACATCCTGTTCCAGGTACTCCTCCTCGAATATATCCTGTACAGAGTATATGAGTATATGTCTTCATaGTGTGGCTCAGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: FNILFQVLLLEYILYRVYEYMSS*CGSGSA
Trigger: AGCAGAACCTGAGCCACAGCATGAAGACATATACTC...ATATACTCTGTACAGGATATATTCGAGGAGGAGTACCTGGAACAGGATGTTGAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR GCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAATCCCAGTCGGCTGCATaGAAAGGATTTCAGCATGTG +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKSQSAA*KGFQHV
Trigger: CACATGCTGAAATCCTTTGCATGCAGCCGACTGGGA...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGCTGAGTTCAAGGCATTaGATGGTGAAGGGTTCCATG +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWLSSRH*MVKGSM
Trigger: CATGGAACCCTTCACCATGCAATGCCTTGAACTCAG...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp AAACAATTTCTGTATGACACCATCTGGGTTTACAGGAAGAGGGCCACTAGAACAAAAGGAAGACTGGGTTaGGAACTTCATATTGCACTG +
Preference number: 4 (lower is better)
Translates to: KQFLYDTIWVYRKRATRTKGRLG*ELHIAL
Trigger: CAGTGCAATATGAAGTTCCCAACCCAGTCTTCCTTT...TGTTCTAGTGGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAGAAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAACCATTCTTGTCAGCATaGTCTGTGGCAGCTCCGTTA +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKPFLSA*SVAAPL
Trigger: TAACGGAGCTGCCACAGACCATGCTGACAAGAATGG...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAGGTCGGAGTTAGGTTaGAGGTGGAGGAGATACTAT +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWRSELG*RWRRYY
Trigger: ATAGTATCTCCTCCACCTCCAACCTAACTCCGACCT...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAATCTCCATTTGCTGGATaGAAGAAGATGGCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKSPFAG*KKMAGR
Trigger: CCTTCCGGCCATCTTCTTCCATCCAGCAAATGGAGA...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAACAATTTCTGTATGACACCATCTGGGTTTACAGGAAGAGGGCCACTAGAACAATATGCAGGTTTCAGTaGGATCTCCATTTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: KQFLYDTIWVYRKRATRTICRFQ*DLHLLD
Trigger: ATCCAGCAAATGGAGATCCCACTGAAACCTGCATAT...TGTTCTAGTGGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAGAAATTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGTGGCTGGACCTATCTTaGCTCCTTTCTTCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWWLDLS*LLSSEE
Trigger: CTCTTCTGAAGAAAGGAGCCAAGATAGGTCCAGCCA...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACGCAAACTTGTATATCTaGACAACGACCTGGGGTACT +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADANLYI*TTTWGT
Trigger: AGTACCCCAGGTCGTTGTCCAGATATACAAGTTTGC...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACTTCTCCATTCTCTGCTaGAAATCCTCCCATTCTAGT +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADFSILC*KSSHSS
Trigger: ACTAGAATGGGAGGATTTTCAGCAGAGAATGGAGAA...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GCGAGAAGGGTTTGTGCTCTATTAACTTGGGACTTTAATAGTGCACGTCTGCAAGAGAATAACTCTCAGTaGATTCTCTTAATAGCCACA +
Preference number: 4 (lower is better)
Translates to: ARRVCALLTWDFNSARLQENNSQ*ILLIAT
Trigger: TGTGGCTATTAAGAGAATTCACTGAGAGTTATTCTC...TTGCAGACGTGCACTATTAAAGTCCCAAGTTAATAGAGCACAAACCCTTCTCGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTAGAGAATAACTCTCAGTaGATTCTCTTAATAGCCACA +
Preference number: 4 (lower is better)
Translates to: PVLGLGVERSVYFAESKLENNSQ*ILLIAT
Trigger: TGTGGCTATTAAGAGAATTCACTGAGAGTTATTCTC...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGCACATTTCATCTTCCTaGTGTGAGAGAGAGGGGTAT +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWHISSS*CEREGY
Trigger: ATACCCCTCTCTCTCACATCAGGAAGATGAAATGTG...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGCATTTCTGCAGTAGAAAAATAAGTCATGAGTGTGTTTaGTGCCTCATCTACAGATGG +
Preference number: 4 (lower is better)
Translates to: QRFSEHWFCPRHFCSRKISHECV*CLIYRW
Trigger: CCATCTGTAGATGAGGCAGCAAACACACTCATGACT...TATTTTTCTACTGCAGAAATGCCTTGGACAAAACCAGTGCTCACTGAATCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACACAGATGACCTCGGAGTaGAGCATGAACCAAAGCACA +
Preference number: 4 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATQMTSE*SMNQST
Trigger: TGTGCTTTGGTTCATGCTGCACTCCGAGGTCATCTG...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS-3UTR GCA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACATTCTTAAATACTCCTTaGTGCTGGCCGGCCATCGTC +
Preference number: 4 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATFLNTP*CWPAIV
Trigger: GACGATGGCCGGCCAGCAGCAAGGAGTATTTAAGAA...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS-3UTR GCA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCAAATGGCCATTCTGTaGATTGTTGGTTTTGTTATA +
Preference number: 4 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLQMAIL*IVGFVI
Trigger: TATAACAAAACCAACAATGCACAGAATGGCCATTTG...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCAGACATGTTCCTACAATaGCTCTTGGAAAATCAATGT +
Preference number: 4 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPDMFLQ*LLENQC
Trigger: ACATTGATTTTCCAAGAGGCATTGTAGGAACATGTC...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp ATAGCCTATTCCATTTTGTGGCAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGACAACAGAGAACGAATaGTCCTTTGTTTCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: IAYSILWQRFSEHWFCPRTTENE*SFVSFQ
Trigger: CTGAAACGAAACAAAGGAGCATTCGTTCTCTGTTGT...CCTTGGACAAAACCAGTGCTCACTGAATCTTTGCCACAAAATGGAATAGGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCAGTCTCCATTTTGTCATaGCAAATTCTCATGTTACAC +
Preference number: 4 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPVSILS*QILMLH
Trigger: GTGTAACATGAGAATTTGGCATGACAAAATGGAGAC...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGAGTGAAATGTTATTCTaGATCTCTGAGCTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQSEMLF*ISELLC
Trigger: ACACAGCAGCTCAGAGATCCAGAATAACATTTCACT...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAGAGATCCAGAGACCTTaGAGGATGGAGGATGATACA +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKEIQRP*RMEDDT
Trigger: TGTATCATCCTCCATCCTCCAAGGTCTCTGGATCTC...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACAGCAATGAGGGCCTGTTaGATGGCATGGCTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATAMRAC*MAWLFL
Trigger: TAAGAAGAGCCATGCCATCCAACAGGCCCTCATTGC...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS-3UTR CCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGGATACTATTGCTAGATaGAGAGAAGCGAAGGCCTAC +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWDTIAR*REAKAY
Trigger: GTAGGCCTTCGCTTCTCTCCATCTAGCAATAGTATC...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAACGAAAATCTCCTCGTTaGCATCTGAAGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKRKSPR*HLKRGR
Trigger: TCTCCCTCTCTTCAGATGCCAACGAGGAGATTTTCG...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAGAATCCTGGGCCAATaGAACATACAACTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWRILGQ*NIQLGE
Trigger: CTCACCAAGTTGTATGTTCCATTGGCCCAGGATTCT...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp AAACAATTTCTGTATGACACCATCTGGGTTTACAGGAAGAGGGCCACTAGAACACTGTTACAATTAGTTTaGGCCAAGAAGGAAACTTTC +
Preference number: 4 (lower is better)
Translates to: KQFLYDTIWVYRKRATRTLLQLV*AKKETF
Trigger: GAAAGTTTCCTTCTTGGCTCAAACTAATTGTAACAG...TGTTCTAGTGGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAGAAATTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACAGACTGTCAAAGCTGTTaGTCTGTGCTCGCTCTACTT +
Preference number: 4 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATDCQSC*SVLALL
Trigger: AAGTAGAGCGAGCACAGATCAACAGCTTTGACAGTC...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS-3UTR TCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAGTAAAGAAATGCTTCTaGTCTCAGGTTCATGCTCCC +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKVKKCF*SQVHAP
Trigger: GGGAGCATGAACCTGAGATCAGAAGCATTTCTTTAC...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp CAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGCATTTCTGCAGTAGAAAAATATGGAAAGACCTTCTGTaGTATAAGAGATCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: QRFSEHWFCPRHFCSRKIWKDLL*YKRSRD
Trigger: GTCTCTGGATCTCTTATAGCACAGAAGGTCTTTCCA...TATTTTTCTACTGCAGAAATGCCTTGGACAAAACCAGTGCTCACTGAATCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAACAAAAACAACTGGCATaGAGCAGTGATACCTACTCC +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKQKQLA*SSDTYS
Trigger: GGAGTAGGTATCACTGCTGCATGCCAGTTGTTTTTG...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAGCGAGAAGGGTTTGTaGTCTATTAACTTGGGACTT +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWSEKGL*SINLGL
Trigger: AAGTCCCAAGTTAATAGAGCACAAACCCTTCTCGCT...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACACCTGAGACAGAAGACTaGCAAATGTATGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATPETED*QMYARE
Trigger: TTCCCTGGCATACATTTGGCAGTCTTCTGTCTCAGG...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS-3UTR CCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAACGGTCAAAGGAAGACTaGGTTGGGAACTTCATATTG +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKRSKED*VGNFIL
Trigger: CAATATGAAGTTCCCAACCCAGTCTTCCTTTGACCG...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAGCCTGTTGGATGGCATaGCTCTTCTTAAATACTCCT +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKACWMA*LFLNTP
Trigger: AGGAGTATTTAAGAAGAGCCATGCCATCCAACAGGC...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGATATGCAGGTTTCAGTaGGATCTCCATTTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWICRFQ*DLHLLD
Trigger: ATCCAGCAAATGGAGATCCCACTGAAACCTGCATAT...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCTGAAATCCTACAATGCCTCTTaGAAAATCAATGTAGTGACA +
Preference number: 4 (lower is better)
Translates to: EILGLSLMVPRDSNLLLKSYNAS*KINVVT
Trigger: TGTCACTACATTGATTTTCCAAGAGGCATTGTAGGA...TTTCAGAAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GTACTAATTAAAATCATCTTGGATTTGGAGGAGACAGAACAGAGACAAAGATGCTGCCCCAACAAGCTCTaGTTGGCATATTCTAGTCAA +
Preference number: 4 (lower is better)
Translates to: VLIKIILDLEETEQRQRCCPNKL*LAYSSQ
Trigger: TTGACTAGAATATGCCAACCAGAGCTTGTTGGGGCA...GCATCTTTGTCTCTGTTCTGTCTCCTCCAAATCCAAGATGATTTTAATTAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGCACACAGAAACTACATaGGAAATTAAGCCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWHTETT*EIKPEN
Trigger: GTTCTCTGGCTTAATTTCTCATGTAGTTTCTGTGTG...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAGAAACCTATTAAACTaGAGTTTGTCACCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWRNLLN*SLSPLS
Trigger: GGACAGAGGTGACAAACTTCAGTTTAATAGGTTTCT...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR GCA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGTTGGGAACTTCATATTaGACTGGAGTAAATAAACCT +
Preference number: 4 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQLGTSY*TGVNKP
Trigger: AGGTTTATTTACTCCAGTGCAATATGAAGTTCCCAA...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGACCCTTAAAAATGTGTaGTTTGAGGATGTGATGTCC +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWTLKNV*FEDVMS
Trigger: GGACATCACATCCTCAAAGCACACATTTTTAAGGGT...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACAAAAGCTGTTGATCTGTaGTCGCTCTACTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATKAVDL*SLYFLF
Trigger: GAAGAGGAAGTAGAGCGAGCACAGATCAACAGCTTT...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS-3UTR GCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGACAACAGAGAACGAATaGTCCTTTGTTTCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWTTENE*SFVSFQ
Trigger: CTGAAACGAAACAAAGGAGCATTCGTTCTCTGTTGT...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACAGCCTGTTGGATGGCATaGCTCTTCTTAAATACTCCT +
Preference number: 4 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATACWMA*LFLNTP
Trigger: AGGAGTATTTAAGAAGAGCCATGCCATCCAACAGGC...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS-3UTR CCA 90 bp CAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGCATTTCTGCAGTAGAAAAATAACAGCAGATACAAAATaGTCTCCATTTTGTCATGCC +
Preference number: 4 (lower is better)
Translates to: QRFSEHWFCPRHFCSRKITADTK*SPFCHA
Trigger: GGCATGACAAAATGGAGACCATTTTGTATCTGCTGT...TATTTTTCTACTGCAGAAATGCCTTGGACAAAACCAGTGCTCACTGAATCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000424789.6
3UTR CAA 72 bp GTGTTTAATAATCCAGGCTTAACTACATTAGCAAACTaGTATATCTGGACAACGACCTGGGGTACTGTACAT +
Preference number: 4 (lower is better)
Translates to: VFNNPGLTTLAN*YIWTTTWGTVH
Trigger: ATGTACAGTACCCCAGGTCGTTGTCCAGATATACAAGTTTGCTAATGTAGTTAAGCCTGGATTATTAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR TCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGCTGTTACAATTAGTTTaGGCCAAGAAGGAAACTTTC +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWLLQLV*AKKETF
Trigger: GAAAGTTTCCTTCTTGGCTCAAACTAATTGTAACAG...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR TCA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACAACTGAATCAAAAACTTaGCAACCTCCAGATGACCTC +
Preference number: 4 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATTESKT*QPPDDL
Trigger: GAGGTCATCTGGAGGTTGTCAAGTTTTTGATTCAGT...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS-3UTR TCA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACAATCGTCCAGTCACACTaGATCAAAAACTTGACAACC +
Preference number: 4 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATIVQSH*IKNLTT
Trigger: GGTTGTCAAGTTTTTGATTCAGTGTGACTGGACGAT...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS-3UTR TCA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACATGCATTACAAAAGCCTaGGACAGAAGACTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATCITKA*DRRLPN
Trigger: ATTTGGCAGTCTTCTGTCTCAGGCTTTTGTAATGCA...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS-3UTR GCA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACTTGGGAACTTCATATTaGACTGGAGTAAATAAACCT +
Preference number: 4 (lower is better)
Translates to: QLHNKNISESDCLLEKADLGTSY*TGVNKP
Trigger: AGGTTTATTTACTCCAGTGCAATATGAAGTTCCCAA...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAGTGAAATGTTATTCTaGATCTCTGAGCTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKSEMLF*ISELLC
Trigger: ACACAGCAGCTCAGAGATCCAGAATAACATTTCACT...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CCA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAATTGACATCAGCTCCATaGGTGAGTAAAAGATCAACA +
Preference number: 4 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKLTSAP*VSKRST
Trigger: TGTTGATCTTTTACTCACCCATGGAGCTGATGTCAA...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGTTGGGAACTTCATATTaGACTGGAGTAAATAAACCT +
Preference number: 4 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWLGTSY*TGVNKP
Trigger: AGGTTTATTTACTCCAGTGCAATATGAAGTTCCCAA...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR GCA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACAGCCACAATAATTTTCTaGTCTGGTTTGGCACATTGT +
Preference number: 4 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATATIIF*SGLAHC
Trigger: ACAATGTGCCAAACCAGAGCAGAAAATTATTGTGGC...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS-3UTR CCA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACACTTGACTGTTTAGTTTaGCTGAATCAGTCTGCATTA +
Preference number: 4 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATLDCLV*LNQSAL
Trigger: TAATGCAGACTGATTCAGCCAAACTAAACAGTCAAG...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS-3UTR CAA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGCGGCACACCTCCAGTTaGCCCCTTCCGGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMRHTSS*PLPAAA
Trigger: AGCTGCAGCCGGAAGGGGCAAACTGGAGGTGTGCCG...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCGGCACACCTCCAGTTaGCCCCTTCCGGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMRHTSS*PLPAAA
Trigger: AGCTGCAGCCGGAAGGGGCAAACTGGAGGTGTGCCG...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCCGGCACACCTCCAGTTaGCCCCTTCCGGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGRHTSS*PLPAAA
Trigger: AGCTGCAGCCGGAAGGGGCAAACTGGAGGTGTGCCG...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCGAGCCCGCTTGCCTGTaGCCCTGGAAGCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAAEPACL*PWKQLL
Trigger: GAGGAGCTGCTTCCAGGGCAACAGGCAAGCGGGCTC...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS CCA 90 bp TGGCGCACTGTGCTGAATAGTGGCACTGCTCCTCGGCGGTTTGGCTaGGCCACTGCCGCCCCTTGTTCCAAGAGCAAACGGCACACCTCC +
Preference number: 5 (lower is better)
Translates to: WRTVLNSGTAPRRFG*ATAAPCSKSKRHTS
Trigger: GGAGGTGTGCCGTTTGCTCTTGGAACAAGGGGCGGCAGTGGCCCAGCCAAACCGCCGAGGAGCAGTGCCACTATTCAGCACAGTGCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGGAAGAGGCATCCACGTaGGCCCCGAACTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLEEAST*APNSSS
Trigger: GCTGCTGGAGTTCGGGGCCAACGTGGATGCCTCTTC...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGGGCCACTGCCGCCCCTaGTTCCAAGAGCAAACGGCA +
Preference number: 5 (lower is better)
Translates to: SPGSREAASQSAACKGFQGHCRP*FQEQTA
Trigger: TGCCGTTTGCTCTTGGAACAAGGGGCGGCAGTGGCC...CTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp ATCCTAATGCACACTGCAGACCTGGTGGCTGCAGGGCGCTGGCGGTCTGGGGAGGGGAAGGGGGAGGGCTaGGGTATTCTTTGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: ILMHTADLVAAGRWRSGEGKGEG*GILCPV
Trigger: GACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCCC...CTCCCCAGACCGCCAGCGCCCTGCAGCCACCAGGTCTGCAGTGTGCATTAGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCTGCACTCAGGCTGGCTaGGACATGCTGCACCGGCCT +
Preference number: 5 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAACTQAG*DMLHRP
Trigger: AGGCCGGTGCAGCATGTCCAAGCCAGCCTGAGTGCA...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGGGGAAGGGGGAGGGCTaGGGTATTCTTTGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLGKGEG*GILCPV
Trigger: GACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCCC...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCTCACAATCTGGGCCTaGGCAGGCTGTAGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: SPGSREAASQSAACKGFQLTIWA*AGCSLS
Trigger: GCTCAGGCTACAGCCTGCCAAGGCCCAGATTGTGAG...CTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS GCA 90 bp GGGCAGCCAGTACCTTGGCCCGTTTCTTGCACAGCAGCACCACAATaGTCAGGTACCCTGCTGCTGCAGCATATCCCAGGGGAGTCAGGC +
Preference number: 5 (lower is better)
Translates to: GQPVPWPVSCTAAPQ*SGTLLLQHIPGESG
Trigger: GCCTGACTCCCCTGGGATATGCTGCAGCAGCAGGGTACCTGAGCATTGTGGTGCTGCTGTGCAAGAAACGGGCCAAGGTACTGGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS-3UTR CAA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGTTGGCATCCACATGTTaGGGGGAGGCATGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLLASTC*GEACGL
Trigger: CAGCCCACATGCCTCCCCCAAACATGTGGATGCCAA...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGGGAGGCCATGGGGTCTaGAACACAGGAACGAAGGCT +
Preference number: 5 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLGGHGV*NTGTKA
Trigger: AGCCTTCGTTCCTGTGTTCAAGACCCCATGGCCTCC...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGGGAGTGCGGCCCTGCTaGTCTGCCATGTTGACATCA +
Preference number: 5 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPGVRPC*SAMLTS
Trigger: TGATGTCAACATGGCAGACAAGCAGGGCCGCACTCC...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGGGGGTACGGCCATTCTaGTCAGCATGGTCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: SPGSREAASQSAACKGFQGVRPF*SAWSVA
Trigger: TGCCACAGACCATGCTGACAAGAATGGCCGTACCCC...CTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCTTGTTGGGACACAGCTaGATGGCCTCGTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPLLGHS*MASFRS
Trigger: GGACCTGAACGAGGCCATCAAGCTGTGTCCCAACAA...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGGGGCTTGGGTATTCTTaGCCCTGTCCTCCCACAGGA +
Preference number: 5 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMGLGYS*PCPPTG
Trigger: TCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCCC...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GCTCTGCACAGTGGCTCCACCAGCCCCATTGTGCTTGTGTCCAGGCCCCCAGCCGTTGGCGGGTGCGGTTaGATTTCGTTAGGGTTGACA +
Preference number: 5 (lower is better)
Translates to: ALHSGSTSPIVLVSRPPAVGGCG*ISLGLT
Trigger: TGTCAACCCTAACGAAATCAAACCGCACCCGCCAAC...GGCTGGGGGCCTGGACACAAGCACAATGGGGCTGGTGGAGCCACTGTGCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CAA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGGCCTGTTTTAGGTTaGGGGGTGGAGAGGTCCGTC +
Preference number: 5 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGWPVLG*GVERSV
Trigger: GACGGACCTCTCCACCCCCAAACCTAAAACAGGCCA...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGGGCGAGAGTCTACACTaGACTGTCTTCGATCCGGTG +
Preference number: 5 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMGESLH*TVFDPV
Trigger: CACCGGATCGAAGACAGTCAAGTGTAGACTCTCGCC...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR CAA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGACCTTGGCCCGTTTCTaGCACAGCAGCACCACAATG +
Preference number: 5 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLTLARF*HSSTTM
Trigger: CATTGTGGTGCTGCTGTGCAAGAAACGGGCCAAGGT...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGGGTAACCTCCTTGAGTaGGAGACACTGGCGACAGCT +
Preference number: 5 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLGNLLE*ETLATA
Trigger: AGCTGTCGCCAGTGTCTCCAACTCAAGGAGGTTACC...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACTGGGGTAACCTCCTaGAGTTGGAGACACTGGCGA +
Preference number: 5 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAATGVTS*SWRHWR
Trigger: TCGCCAGTGTCTCCAACTCAAGGAGGTTACCCCAGT...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS GCA 90 bp GGCCCGTTTCTTGCACAGCAGCACCACAATGCTCAGGTACCCTGCTaGTGCAGCATATCCCAGGGGAGTCAGGCCACTTTCAGAAGAGGC +
Preference number: 5 (lower is better)
Translates to: GPFLAQQHHNAQVPC*CSISQGSQATFRRG
Trigger: GCCTCTTCTGAAAGTGGCCTGACTCCCCTGGGATATGCTGCAGCAGCAGGGTACCTGAGCATTGTGGTGCTGCTGTGCAAGAAACGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000581143.1
ENST00000583356.5
ENST00000583545.1
CDS CCA 90 bp GCAATGGAGGCACCTTGTGCAAGCAGAAAGTCCACGGTTCCTAGATaGCCTTCGGAAGCAGCCATCATCAGGGGAGTGCGGCCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: AMEAPCASRKSTVPR*PSEAAIIRGVRPCL
Trigger: CAAGCAGGGCCGCACTCCCCTGATGATGGCTGCTTCCGAAGGCCATCTAGGAACCGTGGACTTTCTGCTTGCACAAGGTGCCTCCATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGCTTCTTAAATACTCCTaGCTGCTGGCCGGCCATCGT +
Preference number: 5 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMLLKYS*LLAGHR
Trigger: ACGATGGCCGGCCAGCAGCAAGGAGTATTTAAGAAG...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGAGCAATGAGGGCCTGTaGGATGGCATGGCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMSNEGL*DGMALL
Trigger: AAGAAGAGCCATGCCATCCAACAGGCCCTCATTGCT...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAGGCCACTGCCGCCCCTaGTTCCAAGAGCAAACGGCA +
Preference number: 5 (lower is better)
Translates to: VGCMQRISACGLPPLNTTGHCRP*FQEQTA
Trigger: TGCCGTTTGCTCTTGGAACAAGGGGCGGCAGTGGCC...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTCTGCTCCTCGGCGGTTaGGCTGGGCCACTGCCGCCC +
Preference number: 5 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPLLLGG*AGPLPP
Trigger: GGGCGGCAGTGGCCCAGCCAAACCGCCGAGGAGCAG...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTGCTCCTCGGCGGTTaGGCTGGGCCACTGCCGCCC +
Preference number: 5 (lower is better)
Translates to: TYQTHGTGRSQIFIQETALLLGG*AGPLPP
Trigger: GGGCGGCAGTGGCCCAGCCAAACCGCCGAGGAGCAG...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGGGAGTGCGGCCCTGCTaGTCTGCCATGTTGACATCA +
Preference number: 5 (lower is better)
Translates to: RACGWAQTRETEVLAPGRGVRPC*SAMLTS
Trigger: TGATGTCAACATGGCAGACAAGCAGGGCCGCACTCC...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGAGCAATGGAGGCACCTaGTGCAAGCAGAAAGTCCAC +
Preference number: 5 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPSNGGT*CKQKVH
Trigger: GTGGACTTTCTGCTTGCACAAGGTGCCTCCATTGCT...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGGTGAGTTCTGATGAGTaGGAGAAAGGGCAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: ACGWAQTRETEVLAPGRPVSSDE*EKGQVR
Trigger: CCTCACCTGCCCTTTCTCCAACTCATCAGAACTCAC...CGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGGTGAGTTCTGATGAGTaGGAGAAAGGGCAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMVSSDE*EKGQVR
Trigger: CCTCACCTGCCCTTTCTCCAACTCATCAGAACTCAC...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCGGCCGCTGGGCCATTTaGGATAATGGAGATTTGGGT +
Preference number: 5 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAAGRWAI*DNGDLG
Trigger: ACCCAAATCTCCATTATCCAAAATGGCCCAGCGGCC...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AGAGGGGAAGGGGGAGGGCTTGGGTATTCTTTGCCCTGTCCTCCCACAGGAGGGGGCCGCTGGGCCATTTaGGATAATGGAGATTTGGGT +
Preference number: 5 (lower is better)
Translates to: RGEGGGLGYSLPCPPTGGGRWAI*DNGDLG
Trigger: ACCCAAATCTCCATTATCCAAAATGGCCCAGCGGCC...CCCTCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCCCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CAA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCGTGGCTGGACCTATCTaGGCTCCTTTCTTCAGAAGA +
Preference number: 5 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPVAGPI*APFFRR
Trigger: TCTTCTGAAGAAAGGAGCCAAGATAGGTCCAGCCAC...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCGCTGAGTTCAAGGCATaGCATGGTGAAGGGTTCCAT +
Preference number: 5 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPAEFKA*HGEGFH
Trigger: ATGGAACCCTTCACCATGCAATGCCTTGAACTCAGC...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS GCA 90 bp CCAAATGATCCACCTTGGCCCGTTTCTTGCACAGCAGCACCACAATaGTCAGGTACCCTGCTGCTGCAGCATATCCCAGGGGAGTCAGGC +
Preference number: 5 (lower is better)
Translates to: PNDPPWPVSCTAAPQ*SGTLLLQHIPGESG
Trigger: GCCTGACTCCCCTGGGATATGCTGCAGCAGCAGGGTACCTGAGCATTGTGGTGCTGCTGTGCAAGAAACGGGCCAAGGTGGATCATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000581143.1
ENST00000583356.5
CDS-3UTR CAA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGAGCAAGGCAGCAACATaGTGGACAAATTCTGGCACC +
Preference number: 5 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLSKAAT*WTNSGT
Trigger: GGTGCCAGAATTTGTCCACAATGTTGCTGCCTTGCT...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGAGCAAGGCAGCAACATaGTGGACAAATTCTGGCACC +
Preference number: 5 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMSKAAT*WTNSGT
Trigger: GGTGCCAGAATTTGTCCACAATGTTGCTGCCTTGCT...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AGAGCATGTGGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGACCTTGGCCCGTTTCTaGCACAGCAGCACCACAATG +
Preference number: 5 (lower is better)
Translates to: RACGWAQTRETEVLAPGRTLARF*HSSTTM
Trigger: CATTGTGGTGCTGCTGTGCAAGAAACGGGCCAAGGT...CCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCCACATGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGACTGTCAAAGCTGTaGATCTGTGCTCGCTCTACT +
Preference number: 5 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPRLSKL*ICARST
Trigger: AGTAGAGCGAGCACAGATCAACAGCTTTGACAGTCT...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACCTCACAATCTGGGCCTaGGCAGGCTGTAGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHLTIWA*AGCSLS
Trigger: GCTCAGGCTACAGCCTGCCAAGGCCCAGATTGTGAG...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGAAGGTCGGAGTTAGGTaGGAGGTGGAGGAGATACTA +
Preference number: 5 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMKVGVR*EVEEIL
Trigger: TAGTATCTCCTCCACCTCCAACCTAACTCCGACCTT...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCCAGTGGGATCTCCATTaGCTGGATGGAAGAAGATGG +
Preference number: 5 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGQWDLH*LDGRRW
Trigger: CCATCTTCTTCCATCCAGCAAATGGAGATCCCACTG...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGACGAAAATCTCCTCGTaGGCATCTGAAGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLTKISS*ASEERE
Trigger: CTCCCTCTCTTCAGATGCCAACGAGGAGATTTTCGT...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCGTGGCTGGACCTATCTaGGCTCCTTTCTTCAGAAGA +
Preference number: 5 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAAVAGPI*APFFRR
Trigger: TCTTCTGAAGAAAGGAGCCAAGATAGGTCCAGCCAC...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS GCA 90 bp GGCCTGGAAGATATGCTCATCAGTCAGTGGGTGGAGAGAGGCCACTaGCACATTCAGGAGAGGCATCACCCGGTCAAAGGAAGACTGGGT +
Preference number: 5 (lower is better)
Translates to: GLEDMLISQWVERGH*HIQERHHPVKGRLG
Trigger: ACCCAGTCTTCCTTTGACCGGGTGATGCCTCTCCTGAATGTGGCAGTGGCCTCTCTCCACCCACTGACTGATGAGCATATCTTCCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
ENST00000583545.1
CDS GCA 90 bp CCGTTTCTTGCACAGCAGCACCACAATGCTCAGGTACCCTGCTGCTaGAGCATATCCCAGGGGAGTCAGGCCACTTTCAGAAGAGGCATC +
Preference number: 5 (lower is better)
Translates to: PFLAQQHHNAQVPCC*SISQGSQATFRRGI
Trigger: GATGCCTCTTCTGAAAGTGGCCTGACTCCCCTGGGATATGCTGCAGCAGCAGGGTACCTGAGCATTGTGGTGCTGCTGTGCAAGAAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000581143.1
ENST00000583356.5
ENST00000583545.1
CDS GCA 90 bp CTTGGCCCGTTTCTTGCACAGCAGCACCACAATGCTCAGGTACCCTaGTGCTGCAGCATATCCCAGGGGAGTCAGGCCACTTTCAGAAGA +
Preference number: 5 (lower is better)
Translates to: LGPFLAQQHHNAQVP*CCSISQGSQATFRR
Trigger: TCTTCTGAAAGTGGCCTGACTCCCCTGGGATATGCTGCAGCAGCAGGGTACCTGAGCATTGTGGTGCTGCTGTGCAAGAAACGGGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000581143.1
ENST00000583356.5
ENST00000583545.1
CDS GCA 90 bp AAGAAAAGCAGCAGAGCTGGGCAGCCAGTACCTTGGCCCGTTTCTTaGACAGCAGCACCACAATGCTCAGGTACCCTGCTGCTGCAGCAT +
Preference number: 5 (lower is better)
Translates to: KKSSRAGQPVPWPVS*TAAPQCSGTLLLQH
Trigger: ATGCTGCAGCAGCAGGGTACCTGAGCATTGTGGTGCTGCTGTGCAAGAAACGGGCCAAGGTACTGGCTGCCCAGCTCTGCTGCTTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS CCA 90 bp AGGGGAGTGCGGCCCTGCTTGTCTGCCATGTTGACATCAGCTCCATaGGTGAGTAAAAGATCAACAATCTGCCAGTGGCCCTGGCGCACT +
Preference number: 5 (lower is better)
Translates to: RGVRPCLSAMLTSAP*VSKRSTICQWPWRT
Trigger: AGTGCGCCAGGGCCACTGGCAGATTGTTGATCTTTTACTCACCCATGGAGCTGATGTCAACATGGCAGACAAGCAGGGCCGCACTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS CCA 90 bp GTGCTGCATACCTTCACTCACTGGAAGTGGCGGGACAGCGTAGTCTaGCTCAAAAGCACAGTCGCTTTCTGTGGAGATGCCACCTTGCCC +
Preference number: 5 (lower is better)
Translates to: VLHTFTHWKWRDSVV*LKSTVAFCGDATLP
Trigger: GGGCAAGGTGGCATCTCCACAGAAAGCGACTGTGCTTTTGAGCCAGACTACGCTGTCCCGCCACTTCCAGTGAGTGAAGGTATGCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580068.5
ENST00000580466.1
CDS-3UTR CAA 90 bp GGCTGGGCACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCCAAAGGAAGACTGGGTaGGGAACTTCATATTGCACT +
Preference number: 5 (lower is better)
Translates to: GWAQTRETEVLAPGRPLPQRKTG*GTSYCT
Trigger: AGTGCAATATGAAGTTCCCAACCCAGTCTTCCTTTG...GGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTGCCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGAGACTGTCAAAGCTGTaGATCTGTGCTCGCTCTACT +
Preference number: 5 (lower is better)
Translates to: QEKLKSWLPGGRFPVGCMRLSKL*ICARST
Trigger: AGTAGAGCGAGCACAGATCAACAGCTTTGACAGTCT...CATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCACTGCTCCTCGGCGGTTaGGCTGGGCCACTGCCGCCC +
Preference number: 5 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPLLLGG*AGPLPP
Trigger: GGGCGGCAGTGGCCCAGCCAAACCGCCGAGGAGCAG...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGGGTATTTACTGGCCATaGAATGGGCTACTTGGCCAT +
Preference number: 5 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMGIYWP*NGLLGH
Trigger: ATGGCCAAGTAGCCCATTCAATGGCCAGTAAATACC...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCCCAACACTTCAGCCCTaGAGTGGTCTGTATGACAAA +
Preference number: 5 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGPTLQP*SGLYDK
Trigger: TTTGTCATACAGACCACTCAAGGGCTGAAGTGTTGG...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS TCA 90 bp CTCTCAGCAGAAGTCTCTGGATCTCACGGTTGTTGGGACACAGCTTaGTGGCCTCGTTCAGGTCCTCTAAGGCTGCTGCGAACTGTCTGC +
Preference number: 5 (lower is better)
Translates to: LSAEVSGSHGCWDTA*WPRSGPLRLLRTVC
Trigger: GCAGACAGTTCGCAGCAGCCTTAGAGGACCTGAACGAGGCCATCAAGCTGTGTCCCAACAACCGTGAGATCCAGAGACTTCTGCTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS GCA 90 bp CCTAGATGGCCTTCGGAAGCAGCCATCATCAGGGGAGTGCGGCCCTaGTTGTCTGCCATGTTGACATCAGCTCCATGGGTGAGTAAAAGA +
Preference number: 5 (lower is better)
Translates to: PRWPSEAAIIRGVRP*LSAMLTSAPWVSKR
Trigger: TCTTTTACTCACCCATGGAGCTGATGTCAACATGGCAGACAAGCAGGGCCGCACTCCCCTGATGATGGCTGCTTCCGAAGGCCATCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS CCA 90 bp TTCAGCATCACCTTCACTCACTGGAAGTGGCGGGACAGCGTAGTCTaGCTCAAAAGCACAGTCGCTTTCTGTGGAGATGCCACCTTGCCC +
Preference number: 5 (lower is better)
Translates to: FSITFTHWKWRDSVV*LKSTVAFCGDATLP
Trigger: GGGCAAGGTGGCATCTCCACAGAAAGCGACTGTGCTTTTGAGCCAGACTACGCTGTCCCGCCACTTCCAGTGAGTGAAGGTGATGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS CCA 90 bp AATGCTCCCAGCATTGATGGCCTGGAAGATATGCTCATCAGTCAGTaGGTGGAGAGAGGCCACTGCCACATTCAGGAGAGGCATCACCCG +
Preference number: 5 (lower is better)
Translates to: NAPSIDGLEDMLISQ*VERGHCHIQERHHP
Trigger: CGGGTGATGCCTCTCCTGAATGTGGCAGTGGCCTCTCTCCACCCACTGACTGATGAGCATATCTTCCAGGCCATCAATGCTGGGAGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
ENST00000583545.1
CDS CCA 90 bp CATATCCCAGGGGAGTCAGGCCACTTTCAGAAGAGGCATCCACGTTaGCCCCGAACTCCAGCAGCAGGGCTACCATTTCTGTGTAACCAA +
Preference number: 5 (lower is better)
Translates to: HIPGESGHFQKRHPR*PRTPAAGLPFLCNQ
Trigger: TTGGTTACACAGAAATGGTAGCCCTGCTGCTGGAGTTCGGGGCCAACGTGGATGCCTCTTCTGAAAGTGGCCTGACTCCCCTGGGATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000581143.1
ENST00000583356.5
ENST00000583545.1
CDS CCA 90 bp CCCTATCCAAAGGGCGCATTCCACTGTAGTCAACGTGCTCGATCATaGCCCCATGATCTACCAGGAACTGGACCACCTCAGCATCGCCAT +
Preference number: 5 (lower is better)
Translates to: PYPKGAFHCSQRARS*PHDLPGTGPPQHRH
Trigger: ATGGCGATGCTGAGGTGGTCCAGTTCCTGGTAGATCATGGGGCCATGATCGAGCACGTTGACTACAGTGGAATGCGCCCTTTGGATAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GAGAAGCGAAGGCCTACACTTTGGGAATGCAGCAACGGCCTGGGAGTTGGCGGGTACTTCCATGCTGTATaGGTCACCTGGCTGAACTTC +
Preference number: 5 (lower is better)
Translates to: EKRRPTLWECSNGLGVGGYFHAV*VTWLNF
Trigger: GAAGTTCAGCCAGGTGACCAATACAGCATGGAAGTA...CCCGCCAACTCCCAGGCCGTTGCTGCATTCCCAAAGTGTAGGCCTTCGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CAA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAGTCTGCTGCTGCGTTTaGCCCTTGCTCTCGCATAGT +
Preference number: 5 (lower is better)
Translates to: VGCMQRISACGLPPLNTTVCCCV*PLLSHS
Trigger: ACTATGCGAGAGCAAGGGCAAAACGCAGCAGCAGAC...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR CAA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTAGGGAAGGGGGAGGGCTaGGGTATTCTTTGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLGKGEG*GILCPV
Trigger: GACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCCC...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTACTCACAATCTGGGCCTaGGCAGGCTGTAGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLLTIWA*AGCSLS
Trigger: GCTCAGGCTACAGCCTGCCAAGGCCCAGATTGTGAG...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGGCTCCAGATCTAGTTTaGAGTGACAGACTGGGTAAT +
Preference number: 5 (lower is better)
Translates to: SPGSREAASQSAACKGFQAPDLV*SDRLGN
Trigger: ATTACCCAGTCTGTCACTCAAAACTAGATCTGGAGC...CTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS TCA 90 bp CATCACCAGGGCAGTATGCATCCACGTCCAGTTTCTGAGCTGAAGTaGGGGTTGGTGAGCCAAGCTCGGATTCTGGAATTCGTGGGCTCT +
Preference number: 5 (lower is better)
Translates to: HHQGSMHPRPVSELK*GLVSQARILEFVGS
Trigger: AGAGCCCACGAATTCCAGAATCCGAGCTTGGCTCACCAACCCTCACTTCAGCTCAGAAACTGGACGTGGATGCATACTGCCCTGGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580068.5
CDS TCA 90 bp GCTTACCAGGGCAGTATGCATCCACGTCCAGTTTCTGAGCTGAAGTaGGGGTTGGTGAGCCAAGCTCGGATTCTGGAATTCGTGGGCTCT +
Preference number: 5 (lower is better)
Translates to: AYQGSMHPRPVSELK*GLVSQARILEFVGS
Trigger: AGAGCCCACGAATTCCAGAATCCGAGCTTGGCTCACCAACCCTCACTTCAGCTCAGAAACTGGACGTGGATGCATACTGCCCTGGTAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS TCA 90 bp CTCTCAGCAGAAGTCTCTGGATCTCACGGTTGTTGGGACACAGCTTaGTGGCCTCGTTCAGGTCCTCTAAGGCTGCTGCGAACTGTGTTC +
Preference number: 5 (lower is better)
Translates to: LSAEVSGSHGCWDTA*WPRSGPLRLLRTVF
Trigger: GAACACAGTTCGCAGCAGCCTTAGAGGACCTGAACGAGGCCATCAAGCTGTGTCCCAACAACCGTGAGATCCAGAGACTTCTGCTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS GCA 90 bp GCAGTTTCCCAAGCACCTCTCAAAGGGTTTAGAACTGTGTGCTCCTaGAGGATGGATGGCAGTGGCCCTGCACATATGCAGAACCAGCAC +
Preference number: 5 (lower is better)
Translates to: AVSQAPLKGFRTVCS*RMDGSGPAHMQNQH
Trigger: GTGCTGGTTCTGCATATGTGCAGGGCCACTGCCATCCATCCTGCAGGAGCACACAGTTCTAAACCCTTTGAGAGGTGCTTGGGAAACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS CCA 90 bp TCCTCCCATTCTAGTGTGCCTTCAATGCTCCCAGCATTGATGGCCTaGAAGATATGCTCATCAGTCAGTGGGTGGAGAGAGGCCACTGCC +
Preference number: 5 (lower is better)
Translates to: SSHSSVPSMLPALMA*KICSSVSGWREATA
Trigger: GGCAGTGGCCTCTCTCCACCCACTGACTGATGAGCATATCTTCCAGGCCATCAATGCTGGGAGCATTGAAGGCACACTAGAATGGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
ENST00000583545.1
CDS-3UTR CAA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTATGTGGAGATGCCACCTaGCCCAGAGCGGCTTTGGCG +
Preference number: 5 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLCGDAT*PRAALA
Trigger: CGCCAAAGCCGCTCTGGGCAAGGTGGCATCTCCACA...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR CAA 90 bp CTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGGTCCATGCTGGATTTTaGAGACTGCCAAGGTTTTAT +
Preference number: 5 (lower is better)
Translates to: LAPGRPLPSRLHAKDFSMVHAGF*RLPRFY
Trigger: ATAAAACCTTGGCAGTCTCAAAAATCCAGCATGGAC...CATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCGTCCATGCTGGATTTTaGAGACTGCCAAGGTTTTAT +
Preference number: 5 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGVHAGF*RLPRFY
Trigger: ATAAAACCTTGGCAGTCTCAAAAATCCAGCATGGAC...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAGGCCACTGCCGCCCCTaGTTCCAAGAGCAAACGGCA +
Preference number: 5 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLGHCRP*FQEQTA
Trigger: TGCCGTTTGCTCTTGGAACAAGGGGCGGCAGTGGCC...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTAGGGGTACGGCCATTCTaGTCAGCATGGTCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLGVRPF*SAWSVA
Trigger: TGCCACAGACCATGCTGACAAGAATGGCCGTACCCC...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CTGGTCAACCTTCTTCCAGCCTCTGCCTGGCTGAAGTCCAAAGCATGTAGTGTTGGGCTTGGGTATTCTTaGCCCTGTCCTCCCACAGGA +
Preference number: 5 (lower is better)
Translates to: LVNLLPASAWLKSKACSVGLGYS*PCPPTG
Trigger: TCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCCC...AACACTACATGCTTTGGACTTCAGCCAGGCAGAGGCTGGAAGAAGGTTGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CAA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCTGCACTCAGGCTGGCTaGGACATGCTGCACCGGCCT +
Preference number: 5 (lower is better)
Translates to: TYQTHGTGRSQIFIQETACTQAG*DMLHRP
Trigger: AGGCCGGTGCAGCATGTCCAAGCCAGCCTGAGTGCA...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CACAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTTGATTTCGTTAGGGTaGACACTGATAGGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: HRQEKLKSWLPGGRFPVGLISLG*TLIGLL
Trigger: CAGAAGACCTATCAGTGTCAACCCTAACGAAATCAA...GCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AGAGGGGAAGGGGGAGGGCTTGGGTATTCTTTGCCCTGTCCTCCCACAGGAGGGTTGATTTCGTTAGGGTaGACACTGATAGGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: RGEGGGLGYSLPCPPTGGLISLG*TLIGLL
Trigger: CAGAAGACCTATCAGTGTCAACCCTAACGAAATCAA...CCCTCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CAA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTGGTAACCTCCTTGAGTaGGAGACACTGGCGACAGCT +
Preference number: 5 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPGNLLE*ETLATA
Trigger: AGCTGTCGCCAGTGTCTCCAACTCAAGGAGGTTACC...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTACTGGGGTAACCTCCTaGAGTTGGAGACACTGGCGA +
Preference number: 5 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPTGVTS*SWRHWR
Trigger: TCGCCAGTGTCTCCAACTCAAGGAGGTTACCCCAGT...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTATGGCCTGTTTTAGGTTaGGGGGTGGAGAGGTCCGTC +
Preference number: 5 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLWPVLG*GVERSV
Trigger: GACGGACCTCTCCACCCCCAAACCTAAAACAGGCCA...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS TCA 90 bp CTTGCTGCTGGCCGGCCATCGTCCAGTCACACTGAATCAAAAACTTaGCAACCTCCAGATGACCTCGGAGTGCAGCATGAACCAAAGCAC +
Preference number: 5 (lower is better)
Translates to: LAAGRPSSSHTESKT*QPPDDLGVQHEPKH
Trigger: GTGCTTTGGTTCATGCTGCACTCCGAGGTCATCTGGAGGTTGTCAAGTTTTTGATTCAGTGTGACTGGACGATGGCCGGCCAGCAGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000581143.1
ENST00000583016.1
ENST00000583356.5
CDS GCA 90 bp ATACTTGAACCATGTGAGCCTGCCCCACGCGAGGGCAGCAAAGCCTaGGTGCTGCATGTGGGCAAGCAATGGCTCAGTTTGGAATTATTT +
Preference number: 5 (lower is better)
Translates to: ILEPCEPAPREGSKA*VLHVGKQWLSLELF
Trigger: AAATAATTCCAAACTGAGCCATTGCTTGCCCACATGCAGCACGCAGGCTTTGCTGCCCTCGCGTGGGGCAGGCTCACATGGTTCAAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579541.1
CDS CCA 90 bp AGACATGCCCTCCATAATCCGAATGTGCTGCATACCTTCACTCACTaGAAGTGGCGGGACAGCGTAGTCTGGCTCAAAAGCACAGTCGCT +
Preference number: 5 (lower is better)
Translates to: RHALHNPNVLHTFTH*KWRDSVVWLKSTVA
Trigger: AGCGACTGTGCTTTTGAGCCAGACTACGCTGTCCCGCCACTTCCAGTGAGTGAAGGTATGCAGCACATTCGGATTATGGAGGGCATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580068.5
ENST00000580466.1
CDS CCA 90 bp AAAGAAAAAGGGAAGAAAAGCAGCAGAGCTGGGCAGCCAGTACCTTaGCCCGTTTCTTGCACAGCAGCACCACAATGCTCAGGTACCCTG +
Preference number: 5 (lower is better)
Translates to: KEKGKKSSRAGQPVP*PVSCTAAPQCSGTL
Trigger: CAGGGTACCTGAGCATTGTGGTGCTGCTGTGCAAGAAACGGGCCAAGGTACTGGCTGCCCAGCTCTGCTGCTTTTCTTCCCTTTTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS-3UTR CAA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCGGAGGCCATGGGGTCTaGAACACAGGAACGAAGGCT +
Preference number: 5 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVGGHGV*NTGTKA
Trigger: AGCCTTCGTTCCTGTGTTCAAGACCCCATGGCCTCC...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GGGAGGCCGCTTCCCAGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCGGATCACAGAGAAATTaGGTTTTCTCTCCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: GRPLPSRLHAKDFSMWAAGSQRN*VFSPSS
Trigger: AGAAGAAGGAGAGAAAACCAAATTTCTCTGTGATCC...GGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACTGGGAAGCGGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CAGACAAGAGAAACTGAAGTCCTGGCTCCCGGGAGGCCGCTTCCCAGTCGGCTGGGATCACAGAGAAATTaGGTTTTCTCTCCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: QTRETEVLAPGRPLPSRLGSQRN*VFSPSS
Trigger: AGAAGAAGGAGAGAAAACCAAATTTCTCTGTGATCC...CAGCCGACTGGGAAGCGGCCTCCCGGGAGCCAGGACTTCAGTTTCTCTTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGCGACACCGAGAGAGGTaGAGGAGGAGAGACACCTTT +
Preference number: 5 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGRHRER*RRRDTF
Trigger: AAAGGTGTCTCTCCTCCTCAACCTCTCTCGGTGTCG...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTGGATCTCACGGTTGTaGGGACACAGCTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGWISRL*GHSLMA
Trigger: GGCCATCAAGCTGTGTCCCAACAACCGTGAGATCCA...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TCCTGGCCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTTGGATCTCACGGTTGTaGGGACACAGCTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: SWPVLGLGVERSVYFAESWISRL*GHSLMA
Trigger: GGCCATCAAGCTGTGTCCCAACAACCGTGAGATCCA...AGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGGCCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTGTGAGTTCTGATGAGTaGGAGAAAGGGCAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPVSSDE*EKGQVR
Trigger: CCTCACCTGCCCTTTCTCCAACTCATCAGAACTCAC...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGACTGGGGTAACCTCCTaGAGTTGGAGACACTGGCGA +
Preference number: 5 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGTGVTS*SWRHWR
Trigger: TCGCCAGTGTCTCCAACTCAAGGAGGTTACCCCAGT...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAACGGTCTCTTTGGTTaGATAGGGGATGTCTGCCCT +
Preference number: 5 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHNGLFG*IGDVCP
Trigger: AGGGCAGACATCCCCTATCAAACCAAAGAGACCGTT...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACGGATGCCGCTGTTCTTaGCTACAAAACAAGCGCAGT +
Preference number: 5 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHGCRCS*LQNKRS
Trigger: ACTGCGCTTGTTTTGTAGCAAAGAACAGCGGCATCC...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS TCA 90 bp TCCTGTTCAGCATCACCAGGGCAGTATGCATCCACGTCCAGTTTCTaGGCTGAAGTGAGGGTTGGTGAGCCAAGCTCGGATTCTGGAATT +
Preference number: 5 (lower is better)
Translates to: SCSASPGQYASTSSF*AEVRVGEPSSDSGI
Trigger: AATTCCAGAATCCGAGCTTGGCTCACCAACCCTCACTTCAGCTCAGAAACTGGACGTGGATGCATACTGCCCTGGTGATGCTGAACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580068.5
CDS GCA 90 bp TTGAACCATGTGAGCCTGCCCCACGCGAGGGCAGCAAAGCCTGCGTaGTGCATGTGGGCAAGCAATGGCTCAGTTTGGAATTATTTTAAA +
Preference number: 5 (lower is better)
Translates to: LNHVSLPHARAAKPA*CMWASNGSVWNYFK
Trigger: TTTAAAATAATTCCAAACTGAGCCATTGCTTGCCCACATGCAGCACGCAGGCTTTGCTGCCCTCGCGTGGGGCAGGCTCACATGGTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579541.1
CDS-3UTR CAA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTATTGGCATCCACATGTTaGGGGGAGGCATGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLLASTC*GEACGL
Trigger: CAGCCCACATGCCTCCCCCAAACATGTGGATGCCAA...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAGGAGGCCATGGGGTCTaGAACACAGGAACGAAGGCT +
Preference number: 5 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLGGHGV*NTGTKA
Trigger: AGCCTTCGTTCCTGTGTTCAAGACCCCATGGCCTCC...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTAAGCAATGAGGGCCTGTaGGATGGCATGGCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLSNEGL*DGMALL
Trigger: AAGAAGAGCCATGCCATCCAACAGGCCCTCATTGCT...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTATGCTTGTCTGCCATGTaGACATCAGCTCCATGGGTG +
Preference number: 5 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLCLSAM*TSAPWV
Trigger: CACCCATGGAGCTGATGTCAACATGGCAGACAAGCA...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TCCTGGCCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTTGCTTGTCTGCCATGTaGACATCAGCTCCATGGGTG +
Preference number: 5 (lower is better)
Translates to: SWPVLGLGVERSVYFAESCLSAM*TSAPWV
Trigger: CACCCATGGAGCTGATGTCAACATGGCAGACAAGCA...AGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGGCCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGAGCAATGGAGGCACCTaGTGCAAGCAGAAAGTCCAC +
Preference number: 5 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGSNGGT*CKQKVH
Trigger: GTGGACTTTCTGCTTGCACAAGGTGCCTCCATTGCT...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AGTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACGGTATTTACTGGCCATaGAATGGGCTACTTGGCCAT +
Preference number: 5 (lower is better)
Translates to: SRLHAKDFSMWAATSEHHGIYWP*NGLLGH
Trigger: ATGGCCAAGTAGCCCATTCAATGGCCAGTAAATACC...GTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTACCCTGGGTGGAAATATaGGGACTCAGTCTCATGGTC +
Preference number: 5 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLPWVEI*GLSLMV
Trigger: GACCATGAGACTGAGTCCCAATATTTCCACCCAGGG...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS TCA 90 bp GCTGAAAATCCTCCCATTCTAGTGTGCCTTCAATGCTCCCAGCATTaGTGGCCTGGAAGATATGCTCATCAGTCAGTGGGTGGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: AENPPILVCLQCSQH*WPGRYAHQSVGGER
Trigger: CCTCTCTCCACCCACTGACTGATGAGCATATCTTCCAGGCCATCAATGCTGGGAGCATTGAAGGCACACTAGAATGGGAGGATTTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
ENST00000583545.1
CDS TCA 90 bp TTGCATGCATGCTTACCAGGGCAGTATGCATCCACGTCCAGTTTCTaGGCTGAAGTGAGGGTTGGTGAGCCAAGCTCGGATTCTGGAATT +
Preference number: 5 (lower is better)
Translates to: LHACLPGQYASTSSF*AEVRVGEPSSDSGI
Trigger: AATTCCAGAATCCGAGCTTGGCTCACCAACCCTCACTTCAGCTCAGAAACTGGACGTGGATGCATACTGCCCTGGTAAGCATGCATGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS TCA 90 bp GGCTGCTGCGAACTGTGTTCATTTTCCTGCGACACCGAGAGAGGTTaGGGAGGAGAGACACCTTTAGTTCCCGGAAAGTTTTCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: GCCELCSFSCDTERG*GGETPLVPGKFSSP
Trigger: AGGACTTGAAAACTTTCCGGGAACTAAAGGTGTCTCTCCTCCTCAACCTCTCTCGGTGTCGCAGGAAAATGAACACAGTTCGCAGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CAA 90 bp TCCTGGCCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTCGCTCCCTCCATCACTaGACCTGTTTTTACGACTTG +
Preference number: 5 (lower is better)
Translates to: SWPVLGLGVERSVYFAESRSLHH*TCFYDL
Trigger: CAAGTCGTAAAAACAGGTCAAGTGATGGAGGGAGCG...AGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGGCCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CAA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCTTGGCATCCACATGTTaGGGGGAGGCATGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLLASTC*GEACGL
Trigger: CAGCCCACATGCCTCCCCCAAACATGTGGATGCCAA...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACACCTTGGCCCGTTTCTaGCACAGCAGCACCACAATG +
Preference number: 5 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHTLARF*HSSTTM
Trigger: CATTGTGGTGCTGCTGTGCAAGAAACGGGCCAAGGT...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp ATGGAAGTAGACAACAACGGGCATGACCCTGGGTGGAAATATTGGGACTCAGTCAGCAATGGAGGCACCTaGTGCAAGCAGAAAGTCCAC +
Preference number: 5 (lower is better)
Translates to: MEVDNNGHDPGWKYWDSVSNGGT*CKQKVH
Trigger: GTGGACTTTCTGCTTGCACAAGGTGCCTCCATTGCT...GACTGAGTCCCAATATTTCCACCCAGGGTCATGCCCGTTGTTGTCTACTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTGGGGTACGGCCATTCTaGTCAGCATGGTCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLGVRPF*SAWSVA
Trigger: TGCCACAGACCATGCTGACAAGAATGGCCGTACCCC...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGCCCTCTTCCATCAGCTaGCTCAACAGGATGATCATG +
Preference number: 5 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGPSSIS*LNRMIM
Trigger: CATGATCATCCTGTTGAGCAAGCTGATGGAAGAGGG...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTCGACACCGAGAGAGGTaGAGGAGGAGAGACACCTTT +
Preference number: 5 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPRHRER*RRRDTF
Trigger: AAAGGTGTCTCTCCTCCTCAACCTCTCTCGGTGTCG...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCTTGTTGGGACACAGCTaGATGGCCTCGTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: TYQTHGTGRSQIFIQETALLGHS*MASFRS
Trigger: GGACCTGAACGAGGCCATCAAGCTGTGTCCCAACAA...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTAAACGGTCTCTTTGGTTaGATAGGGGATGTCTGCCCT +
Preference number: 5 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLNGLFG*IGDVCP
Trigger: AGGGCAGACATCCCCTATCAAACCAAAGAGACCGTT...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACAGGGCTTGAGTTAGTCTaGCTATTTGCTTTCAGCACA +
Preference number: 5 (lower is better)
Translates to: VGCMQRISACGLPPLNTTGLELV*LFAFST
Trigger: TGTGCTGAAAGCAAATAGCAAGACTAACTCAAGCCC...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS GCA 90 bp ATAAATGCAGTTTCCCAAGCACCTCTCAAAGGGTTTAGAACTGTGTaGTCCTGCAGGATGGATGGCAGTGGCCCTGCACATATGCAGAAC +
Preference number: 5 (lower is better)
Translates to: INAVSQAPLKGFRTV*SCRMDGSGPAHMQN
Trigger: GTTCTGCATATGTGCAGGGCCACTGCCATCCATCCTGCAGGAGCACACAGTTCTAAACCCTTTGAGAGGTGCTTGGGAAACTGCATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS-3UTR CAA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGGAGATGATGGCAGTTTaGCCGAATCCAATGTTTCCC +
Preference number: 5 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGEMMAV*PNPMFP
Trigger: GGGAAACATTGGATTCGGCAAAACTGCCATCATCTC...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACGAAGAGGCATCCACGTaGGCCCCGAACTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: QLHNKNISESDCLLEKADEEAST*APNSSS
Trigger: GCTGCTGGAGTTCGGGGCCAACGTGGATGCCTCTTC...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTATGCTTGTCTGCCATGTaGACATCAGCTCCATGGGTG +
Preference number: 5 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLCLSAM*TSAPWV
Trigger: CACCCATGGAGCTGATGTCAACATGGCAGACAAGCA...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACCTCTGGATCTCACGGTaGTTGGGACACAGCTTGATG +
Preference number: 5 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHLWISR*LGHSLM
Trigger: CATCAAGCTGTGTCCCAACAACCGTGAGATCCAGAG...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAGGCCGCTGGGCCATTTaGGATAATGGAGATTTGGGT +
Preference number: 5 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLGRWAI*DNGDLG
Trigger: ACCCAAATCTCCATTATCCAAAATGGCCCAGCGGCC...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTGCTCCAGATCTAGTTTaGAGTGACAGACTGGGTAAT +
Preference number: 5 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPAPDLV*SDRLGN
Trigger: ATTACCCAGTCTGTCACTCAAAACTAGATCTGGAGC...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAGTTGGCGGGTGCGGTTaGATTTCGTTAGGGTTGACA +
Preference number: 5 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLVGGCG*ISLGLT
Trigger: TGTCAACCCTAACGAAATCAAACCGCACCCGCCAAC...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCGGTAACCTCCTTGAGTaGGAGACACTGGCGACAGCT +
Preference number: 5 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLGNLLE*ETLATA
Trigger: AGCTGTCGCCAGTGTCTCCAACTCAAGGAGGTTACC...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGAAGGGCTGGCTGTTTTaGACATGTTCCTACAATGCC +
Preference number: 5 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGKGWLF*TCSYNA
Trigger: GGCATTGTAGGAACATGTCAAAAACAGCCAGCCCTT...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTCCCTGGGTGGAAATATaGGGACTCAGTCTCATGGTC +
Preference number: 5 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPPWVEI*GLSLMV
Trigger: GACCATGAGACTGAGTCCCAATATTTCCACCCAGGG...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTATTCAAGATCAGAAGCTaGCTGTCTATCTCATGCCCC +
Preference number: 5 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLFKIRS*LSISCP
Trigger: GGGGCATGAGATAGACAGCAAGCTTCTGATCTTGAA...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CTGGTCAACCTTCTTCCAGCCTCTGCCTGGCTGAAGTCCAAAGCATGTAGTGTTGACATTTTAGGTGTTTaGCCCATAGGGTATAGGCCC +
Preference number: 5 (lower is better)
Translates to: LVNLLPASAWLKSKACSVDILGV*PIGYRP
Trigger: GGGCCTATACCCTATGGGCAAAACACCTAAAATGTC...AACACTACATGCTTTGGACTTCAGCCAGGCAGAGGCTGGAAGAAGGTTGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CAA 90 bp CTGGTCAACCTTCTTCCAGCCTCTGCCTGGCTGAAGTCCAAAGCATGTAGTGTTAGGAGCGAGAAGGGTTaGTGCTCTATTAACTTGGGA +
Preference number: 5 (lower is better)
Translates to: LVNLLPASAWLKSKACSVRSEKG*CSINLG
Trigger: TCCCAAGTTAATAGAGCACAAACCCTTCTCGCTCCT...AACACTACATGCTTTGGACTTCAGCCAGGCAGAGGCTGGAAGAAGGTTGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CAA 90 bp TGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCCCTATTCAAAGAGTTCGTCTaGCACAACTGGCACAGATGC +
Preference number: 5 (lower is better)
Translates to: WSQPDFYSGNCPSCSPSLFKEFV*HNWHRC
Trigger: GCATCTGTGCCAGTTGTGCAAGACGAACTCTTTGAA...TAGGGAAGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CAA 90 bp TCTCCTGCCCCAACAAGCTCTGGTTGGCATATTCTAGTCAAAAACAACTGGCATTTGCAGGTCGGTTTCTaGAGAAATGGGCAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: SPAPTSSGWHILVKNNWHLQVGF*RNGQPR
Trigger: CCTGGGCTGCCCATTTCTCAAGAAACCGACCTGCAA...ATGCCAGTTGTTTTTGACTAGAATATGCCAACCAGAGCTTGTTGGGGCAGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS TCA 90 bp GTCACAGGTGCACAATCACTGTGCTACAGTAAACTTCTAAGGCTCTaGGATGTCATTGAGAGGCCTACGTCTCAGTTCCCAAAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: VTGAQSLCYSKLLRL*DVIERPTSQFPKEW
Trigger: CCACTCCTTTGGGAACTGAGACGTAGGCCTCTCAATGACATCTCAGAGCCTTAGAAGTTTACTGTAGCACAGTGATTGTGCACCTGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS GCA 90 bp GTGCAAAGCGAACTCTTAAATCCTGCTGTGTGCGAGCACCACCCATaGTCTGTCTTGGCATTCGTAGAGAAGTTCTCAAAGGTGTATGTC +
Preference number: 5 (lower is better)
Translates to: VQSELLNPAVCEHHP*SVLAFVEKFSKVYV
Trigger: GACATACACCTTTGAGAACTTCTCTACGAATGCCAAGACAGAGCATGGGTGGTGCTCGCACACAGCAGGATTTAAGAGTTCGCTTTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GTCGGCTGCATGCAAAGGATTTCAGCATGTGGGCTGCCACCTCTGAACACCACATCAGAAACGATACAATaGTATCCCCATAATCCGGTT +
Preference number: 5 (lower is better)
Translates to: VGCMQRISACGLPPLNTTSETIQ*YPHNPV
Trigger: AACCGGATTATGGGGATACAATTGTATCGTTTCTGA...TGTGGTGTTCAGAGGTGGCAGCCCACATGCTGAAATCCTTTGCATGCAGCCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TCTCCTGCCCCAACAAGCTCTGGTTGGCATATTCTAGTCAAAAACAACTGGCATCTTCTTAAATACTCCTaGCTGCTGGCCGGCCATCGT +
Preference number: 5 (lower is better)
Translates to: SPAPTSSGWHILVKNNWHLLKYS*LLAGHR
Trigger: ACGATGGCCGGCCAGCAGCAAGGAGTATTTAAGAAG...ATGCCAGTTGTTTTTGACTAGAATATGCCAACCAGAGCTTGTTGGGGCAGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CAA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTATGCTGCGTTTTGCCCTaGCTCTCGCATAGTAAGCTT +
Preference number: 5 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLCCVLP*LSHSKL
Trigger: AAGCTTACTATGCGAGAGCAAGGGCAAAACGCAGCA...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR CAA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTTGCTGCGTTTTGCCCTaGCTCTCGCATAGTAAGCTT +
Preference number: 5 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPCCVLP*LSHSKL
Trigger: AAGCTTACTATGCGAGAGCAAGGGCAAAACGCAGCA...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR CAA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCTCTGGATCTCACGGTaGTTGGGACACAGCTTGATG +
Preference number: 5 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLLWISR*LGHSLM
Trigger: CATCAAGCTGTGTCCCAACAACCGTGAGATCCAGAG...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGGGGCTTGGGTATTCTTaGCCCTGTCCTCCCACAGGA +
Preference number: 5 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQGLGYS*PCPPTG
Trigger: TCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCCC...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTGTTGGCGGGTGCGGTTaGATTTCGTTAGGGTTGACA +
Preference number: 5 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLVGGCG*ISLGLT
Trigger: TGTCAACCCTAACGAAATCAAACCGCACCCGCCAAC...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTAAGGTCGGAGTTAGGTaGGAGGTGGAGGAGATACTA +
Preference number: 5 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPKVGVR*EVEEIL
Trigger: TAGTATCTCCTCCACCTCCAACCTAACTCCGACCTT...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTACAGTGGGATCTCCATTaGCTGGATGGAAGAAGATGG +
Preference number: 5 (lower is better)
Translates to: KAIVSWKKLTSVSDLPGLQWDLH*LDGRRW
Trigger: CCATCTTCTTCCATCCAGCAAATGGAGATCCCACTG...TAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AAACAATTTCTGTATGACACCATCTGGGTTTACAGGAAGAGGGCCACTAGAACAAGCAGCCGGCTGCCTTaGCAGGTCGGTTTCTTGAGA +
Preference number: 5 (lower is better)
Translates to: KQFLYDTIWVYRKRATRTSSRLP*QVGFLR
Trigger: TCTCAAGAAACCGACCTGCAAAGGCAGCCGGCTGCT...TGTTCTAGTGGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAGAAATTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS TCA 90 bp TCTCTGCGCTTGATTAGGAACATGGAGAGGTTCTCCATTCTCTGCTaGAAATCCTCCCATTCTAGTGTGCCTTCAATGCTCCCAGCATTG +
Preference number: 5 (lower is better)
Translates to: SLRLIRNMERFSILC*KSSHSSVPSMLPAL
Trigger: CAATGCTGGGAGCATTGAAGGCACACTAGAATGGGAGGATTTTCAGCAGAGAATGGAGAACCTCTCCATGTTCCTAATCAAGCGCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
ENST00000583545.1
CDS-3UTR CAA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCGCTCCCTCCATCACTaGACCTGTTTTTACGACTTG +
Preference number: 5 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLRSLHH*TCFYDL
Trigger: CAAGTCGTAAAAACAGGTCAAGTGATGGAGGGAGCG...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR CAA 90 bp GAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCTGAAAGGCGAGAGTCTACACTaGACTGTCTTCGATCCGGTG +
Preference number: 5 (lower is better)
Translates to: EILGLSLMVPRDSNLLLKGESLH*TVFDPV
Trigger: CACCGGATCGAAGACAGTCAAGTGTAGACTCTCGCC...TTTCAGAAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CAA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTTCCCCAGCATATTTaGTGCGTTCCACATTTTCAG +
Preference number: 5 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGFPQHI*CVPHFQ
Trigger: CTGAAAATGTGGAACGCACAAAATATGCTGGGGAAA...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp ACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCACCCATGCTCTGTCTaGGCATTCGTAGAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: TSVKAIVSWKKLTSVSDLHPCSV*AFVEKF
Trigger: GAACTTCTCTACGAATGCCAAGACAGAGCATGGGTG...GAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTTCAGAAACGATACAATaGTATCCCCATAATCCGGTT +
Preference number: 5 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPSETIQ*YPHNPV
Trigger: AACCGGATTATGGGGATACAATTGTATCGTTTCTGA...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GTACTAATTAAAATCATCTTGGATTTGGAGGAGACAGAACAGAGACAAAGATGCGAAGAGGCATCCACGTaGGCCCCGAACTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VLIKIILDLEETEQRQRCEEAST*APNSSS
Trigger: GCTGCTGGAGTTCGGGGCCAACGTGGATGCCTCTTC...GCATCTTTGTCTCTGTTCTGTCTCCTCCAAATCCAAGATGATTTTAATTAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CAA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGTGGATCTCACGGTTGTaGGGACACAGCTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQWISRL*GHSLMA
Trigger: GGCCATCAAGCTGTGTCCCAACAACCGTGAGATCCA...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GCGAGAAGGGTTTGTGCTCTATTAACTTGGGACTTTAATAGTGCACGTCTGCAAATCCAACTAACGGGATaGTCACACCAGCCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: ARRVCALLTWDFNSARLQIQLTG*SHQPAF
Trigger: GAAGGCTGGCTGGTGTGACAATCCCGTTAGTTGGAT...TTGCAGACGTGCACTATTAAAGTCCCAAGTTAATAGAGCACAAACCCTTCTCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CAA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCAATCCAACTAACGGGATaGTCACACCAGCCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPIQLTG*SHQPAF
Trigger: GAAGGCTGGCTGGTGTGACAATCCCGTTAGTTGGAT...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTTTCAAGATCAGAAGCTaGCTGTCTATCTCATGCCCC +
Preference number: 5 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPFKIRS*LSISCP
Trigger: GGGGCATGAGATAGACAGCAAGCTTCTGATCTTGAA...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCCTTCCTGCAGCCCTAGAACGAATGCTCCTTaGTTTCGTTTCAGTTGCTTA +
Preference number: 5 (lower is better)
Translates to: WDWSQPDFYSGNCPSCSPRTNAP*FRFSCL
Trigger: TAAGCAACTGAAACGAAACAAAGGAGCATTCGTTCT...AGGGCTGCAGGAAGGGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TCTCCTGCCCCAACAAGCTCTGGTTGGCATATTCTAGTCAAAAACAACTGGCATACCTGCTGTGAGGCTTaGGACACCGAAATGAAGGTT +
Preference number: 5 (lower is better)
Translates to: SPAPTSSGWHILVKNNWHTCCEA*DTEMKV
Trigger: AACCTTCATTTCGGTGTCCAAAGCCTCACAGCAGGT...ATGCCAGTTGTTTTTGACTAGAATATGCCAACCAGAGCTTGTTGGGGCAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS GCA 90 bp TGTAGAGATTTCGTAAAGACGCCAGTGCCATGGAAAGACCTTCTGTaGTATAAGAGATCCAGAGACCTTGGAGGATGGAGGATGATACAC +
Preference number: 5 (lower is better)
Translates to: CRDFVKTPVPWKDLL*YKRSRDLGGWRMIH
Trigger: GTGTATCATCCTCCATCCTCCAAGGTCTCTGGATCTCTTATAGCACAGAAGGTCTTTCCATGGCACTGGCGTCTTTACGAAATCTCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
ENST00000583545.1
CDS GCA 90 bp GTCACACTGAATCAAAAACTTGACAACCTCCAGATGACCTCGGAGTaGAGCATGAACCAAAGCACACTGCCCGTTCTTATCCAAATGATC +
Preference number: 5 (lower is better)
Translates to: VTLNQKLDNLQMTSE*SMNQSTLPVLIQMI
Trigger: GATCATTTGGATAAGAACGGGCAGTGTGCTTTGGTTCATGCTGCACTCCGAGGTCATCTGGAGGTTGTCAAGTTTTTGATTCAGTGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000581143.1
ENST00000583016.1
ENST00000583356.5
CDS GCA 90 bp ACAATCCTATTGCCTACTTCTTACCTCAGTATAACCCATGCTGGCTaGAGCAATGAGGGCCTGTTGGATGGCATGGCTCTTCTTAAATAC +
Preference number: 5 (lower is better)
Translates to: TILLPTSYLSITHAG*SNEGLLDGMALLKY
Trigger: GTATTTAAGAAGAGCCATGCCATCCAACAGGCCCTCATTGCTGCAGCCAGCATGGGTTATACTGAGGTAAGAAGTAGGCAATAGGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581143.1
CDS-3UTR CAA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACCAAAGGAAGACTGGGTaGGGAACTTCATATTGCACT +
Preference number: 5 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHQRKTG*GTSYCT
Trigger: AGTGCAATATGAAGTTCCCAACCCAGTCTTCCTTTG...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGCTTCTTAAATACTCCTaGCTGCTGGCCGGCCATCGT +
Preference number: 5 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQLLKYS*LLAGHR
Trigger: ACGATGGCCGGCCAGCAGCAAGGAGTATTTAAGAAG...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACGTCTGCTGCTGCGTTTaGCCCTTGCTCTCGCATAGT +
Preference number: 5 (lower is better)
Translates to: QLHNKNISESDCLLEKADVCCCV*PLLSHS
Trigger: ACTATGCGAGAGCAAGGGCAAAACGCAGCAGCAGAC...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS-3UTR CAA 90 bp CAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACTTGTTGGGACACAGCTaGATGGCCTCGTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: QLHNKNISESDCLLEKADLLGHS*MASFRS
Trigger: GGACCTGAACGAGGCCATCAAGCTGTGTCCCAACAA...GTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTAAAGGTCGGAGTTAGGTaGGAGGTGGAGGAGATACTA +
Preference number: 5 (lower is better)
Translates to: PVLGLGVERSVYFAESKLKVGVR*EVEEIL
Trigger: TAGTATCTCCTCCACCTCCAACCTAACTCCGACCTT...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp ATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGTTAAAGCACCCAGTAAGCAGCATCTaGAGACTATTCCGAAACATG +
Preference number: 5 (lower is better)
Translates to: IVSWKKLTSVSDLPGLKHPVSSI*RLFRNM
Trigger: CATGTTTCGGAATAGTCTCAAGATGCTGCTTACTGG...GTGCTTTAACCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CAA 90 bp GTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGACCCTGAAACAGTTTTaGCTGCGTCTGACTTTAAAA +
Preference number: 5 (lower is better)
Translates to: VKAIVSWKKLTSVSDLPGTLKQF*LRLTLK
Trigger: TTTTAAAGTCAGACGCAGCAAAAACTGTTTCAGGGT...CCCAGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTGGGCTTGAGTTAGTCTaGCTATTTGCTTTCAGCACA +
Preference number: 5 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPGLELV*LFAFST
Trigger: TGTGCTGAAAGCAAATAGCAAGACTAACTCAAGCCC...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CTGGTCAACCTTCTTCCAGCCTCTGCCTGGCTGAAGTCCAAAGCATGTAGTGTTACTACATTAGCAAACTaGTATATCTGGACAACGACC +
Preference number: 5 (lower is better)
Translates to: LVNLLPASAWLKSKACSVTTLAN*YIWTTT
Trigger: GGTCGTTGTCCAGATATACAAGTTTGCTAATGTAGT...AACACTACATGCTTTGGACTTCAGCCAGGCAGAGGCTGGAAGAAGGTTGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CAA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGCACCCATGCTCTGTCTaGGCATTCGTAGAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQHPCSV*AFVEKF
Trigger: GAACTTCTCTACGAATGCCAAGACAGAGCATGGGTG...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCAGAGATGATGGCAGTTTaGCCGAATCCAATGTTTCCC +
Preference number: 5 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPEMMAV*PNPMFP
Trigger: GGGAAACATTGGATTCGGCAAAACTGCCATCATCTC...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCTGAAAAGCAAGGCAGCAACATaGTGGACAAATTCTGGCACC +
Preference number: 5 (lower is better)
Translates to: EILGLSLMVPRDSNLLLKSKAAT*WTNSGT
Trigger: GGTGCCAGAATTTGTCCACAATGTTGCTGCCTTGCT...TTTCAGAAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp ACTTACTTACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAGACTGTCAAAGCTGTaGATCTGTGCTCGCTCTACT +
Preference number: 5 (lower is better)
Translates to: TYLLTRHMGLVAARFLFRRLSKL*ICARST
Trigger: AGTAGAGCGAGCACAGATCAACAGCTTTGACAGTCT...CCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGTAAGTAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGCGACACCGAGAGAGGTaGAGGAGGAGAGACACCTTT +
Preference number: 5 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWRHRER*RRRDTF
Trigger: AAAGGTGTCTCTCCTCCTCAACCTCTCTCGGTGTCG...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CTAGAACAAAATCTGGCTGTAGGTGAAGATCCAACTAACGGGATTGTCACACCAGGTATTTACTGGCCATaGAATGGGCTACTTGGCCAT +
Preference number: 5 (lower is better)
Translates to: LEQNLAVGEDPTNGIVTPGIYWP*NGLLGH
Trigger: ATGGCCAAGTAGCCCATTCAATGGCCAGTAAATACC...TGGTGTGACAATCCCGTTAGTTGGATCTTCACCTACAGCCAGATTTTGTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCTGAAACAGTGGGATCTCCATTaGCTGGATGGAAGAAGATGG +
Preference number: 5 (lower is better)
Translates to: EILGLSLMVPRDSNLLLKQWDLH*LDGRRW
Trigger: CCATCTTCTTCCATCCAGCAAATGGAGATCCCACTG...TTTCAGAAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp ACTTACCAGACACATGGGACTGGTCGCAGCCAGATTTTTATTCAGGAAACTGCCTTGCCCCTAAGCCCTTaGTTCATTGTTGTTAGTCAT +
Preference number: 5 (lower is better)
Translates to: TYQTHGTGRSQIFIQETALPLSP*FIVVSH
Trigger: ATGACTAACAACAATGAACAAAGGGCTTAGGGGCAA...GGCAGTTTCCTGAATAAAAATCTGGCTGCGACCAGTCCCATGTGTCTGGTAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS TCA 90 bp GTCATGAGTAAGGGGAACAGCAGGCAACAGATGGAAGCACTTAAATaGACGACACACTCTGTCAGACTCAGATCAGGTTACCCTATTTTT +
Preference number: 5 (lower is better)
Translates to: VMSKGNSRQQMEALK*TTHSVRLRSGYPIF
Trigger: AAAAATAGGGTAACCTGATCTGAGTCTGACAGAGTGTGTCGTTCATTTAAGTGCTTCCATCTGTTGCCTGCTGTTCCCCTTACTCATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS CCA 90 bp CCTTTATATTTGGAGTGTAGAGATTTCGTAAAGACGCCAGTGCCATaGAAAGACCTTCTGTGCTATAAGAGATCCAGAGACCTTGGAGGA +
Preference number: 5 (lower is better)
Translates to: PLYLECRDFVKTPVP*KDLLCYKRSRDLGG
Trigger: TCCTCCAAGGTCTCTGGATCTCTTATAGCACAGAAGGTCTTTCCATGGCACTGGCGTCTTTACGAAATCTCTACACTCCAAATATAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
ENST00000583545.1
CDS-3UTR CAA 90 bp ATAGCCTATTCCATTTTGTGGCAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGTACTTCCATGCTGTATaGGTCACCTGGCTGAACTTC +
Preference number: 5 (lower is better)
Translates to: IAYSILWQRFSEHWFCPRYFHAV*VTWLNF
Trigger: GAAGTTCAGCCAGGTGACCAATACAGCATGGAAGTA...CCTTGGACAAAACCAGTGCTCACTGAATCTTTGCCACAAAATGGAATAGGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CAA 90 bp TCTCCTGCCCCAACAAGCTCTGGTTGGCATATTCTAGTCAAAAACAACTGGCATGTCCATGCTGGATTTTaGAGACTGCCAAGGTTTTAT +
Preference number: 5 (lower is better)
Translates to: SPAPTSSGWHILVKNNWHVHAGF*RLPRFY
Trigger: ATAAAACCTTGGCAGTCTCAAAAATCCAGCATGGAC...ATGCCAGTTGTTTTTGACTAGAATATGCCAACCAGAGCTTGTTGGGGCAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CAA 90 bp TCAGTGAAAGCGATTGTCTCCTGGAAAAAGCTGACCAGTGTGTCTGATCTCCCTTCAGAAACGATACAATaGTATCCCCATAATCCGGTT +
Preference number: 5 (lower is better)
Translates to: SVKAIVSWKKLTSVSDLPSETIQ*YPHNPV
Trigger: AACCGGATTATGGGGATACAATTGTATCGTTTCTGA...AGGGAGATCAGACACACTGGTCAGCTTTTTCCAGGAGACAATCGCTTTCACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TTCAACATCCTGTTCCAGGTACTCCTCCTCGAATATATCCTGTACAGAGTATATCCCTCTTCCATCAGCTaGCTCAACAGGATGATCATG +
Preference number: 5 (lower is better)
Translates to: FNILFQVLLLEYILYRVYPSSIS*LNRMIM
Trigger: CATGATCATCCTGTTGAGCAAGCTGATGGAAGAGGG...ATATACTCTGTACAGGATATATTCGAGGAGGAGTACCTGGAACAGGATGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CAA 90 bp TGGGTGGAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTTTGATTTCGTTAGGGTaGACACTGATAGGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: WVEILGLSLMVPRDSNLLLISLG*TLIGLL
Trigger: CAGAAGACCTATCAGTGTCAACCCTAACGAAATCAA...AAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTCCACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS TCA 90 bp TTTATTAAAGCATTGTCATGGCATCAGAGTAACTGTTTTACCTGCTaGGTTCTGACAAAGACAGCACAGGTCCCTGCTCAAGGGACTCTA +
Preference number: 5 (lower is better)
Translates to: FIKALSWHQSNCFTC*VLTKTAQVPAQGTL
Trigger: TAGAGTCCCTTGAGCAGGGACCTGTGCTGTCTTTGTCAGAACTCAGCAGGTAAAACAGTTACTCTGATGCCATGACAATGCTTTAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS CCA 90 bp CAGGCAAAGAGGATTGAAAGAGGAAAACTGCTTGACTGTTTAGTTTaGCTGAATCAGTCTGCATTACAAAAGCCTGAGACAGAAGACTGC +
Preference number: 5 (lower is better)
Translates to: QAKRIERGKLLDCLV*LNQSALQKPETEDC
Trigger: GCAGTCTTCTGTCTCAGGCTTTTGTAATGCAGACTGATTCAGCCAAACTAAACAGTCAAGCAGTTTTCCTCTTTCAATCCTCTTTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS-3UTR CAA 90 bp AAACAATTTCTGTATGACACCATCTGGGTTTACAGGAAGAGGGCCACTAGAACACAAAGGAAGACTGGGTaGGGAACTTCATATTGCACT +
Preference number: 5 (lower is better)
Translates to: KQFLYDTIWVYRKRATRTQRKTG*GTSYCT
Trigger: AGTGCAATATGAAGTTCCCAACCCAGTCTTCCTTTG...TGTTCTAGTGGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAGAAATTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAGCAATGAGGGCCTGTaGGATGGCATGGCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKSNEGL*DGMALL
Trigger: AAGAAGAGCCATGCCATCCAACAGGCCCTCATTGCT...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp TCTCCTGCCCCAACAAGCTCTGGTTGGCATATTCTAGTCAAAAACAACTGGCATTTCCTACAATGCCTCTaGGAAAATCAATGTAGTGAC +
Preference number: 5 (lower is better)
Translates to: SPAPTSSGWHILVKNNWHFLQCL*ENQCSD
Trigger: GTCACTACATTGATTTTCCAAGAGGCATTGTAGGAA...ATGCCAGTTGTTTTTGACTAGAATATGCCAACCAGAGCTTGTTGGGGCAGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CAA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAGCCTGTGCCGAGGCTTaGGTTCCAATGTTCTTGCTA +
Preference number: 5 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKACAEA*VPMFLL
Trigger: TAGCAAGAACATTGGAACCAAAGCCTCGGCACAGGC...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp CCTGTTTTAGGTTTGGGGGTGGAGAGGTCCGTCTATTTCGCAGAATCTAAATTAGCCCTTTGTTCATTGTaGTTAGTCATGGTAGATGGT +
Preference number: 5 (lower is better)
Translates to: PVLGLGVERSVYFAESKLALCSL*LVMVDG
Trigger: ACCATCTACCATGACTAACAACAATGAACAAAGGGC...TAATTTAGATTCTGCGAAATAGACGGACCTCTCCACCCCCAAACCTAAAACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CAA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAATTCCATGACACGTCTTaGCAGGTAGCTCTTGCCCCT +
Preference number: 5 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKFHDTS*QVALAP
Trigger: AGGGGCAAGAGCTACCTGCAAAGACGTGTCATGGAA...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS TCA 90 bp ATGGCAGGAGAACTTAAGGGAGGTATGAGGCGTGTACAAGAATTATaGGATGAAGTCAAGGGAAAAGATCAGGGTTCTAGAGATCATACA +
Preference number: 5 (lower is better)
Translates to: MAGELKGGMRRVQEL*DEVKGKDQGSRDHT
Trigger: TGTATGATCTCTAGAACCCTGATCTTTTCCCTTGACTTCATCTCATAATTCTTGTACACGCCTCATACCTCCCTTAAGTTCTCCTGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS TCA 90 bp GAGATTTTGTTAGAAATGCAAATTCTTGACCCACTCCAGACCTACTaGGTAAGAAATTCTGGGGGCCCACCAATCTGCATTTGGACAAAT +
Preference number: 5 (lower is better)
Translates to: EILLEMQILDPLQTY*VRNSGGPPICIWTN
Trigger: ATTTGTCCAAATGCAGATTGGTGGGCCCCCAGAATTTCTTACTCAGTAGGTCTGGAGTGGGTCAAGAATTTGCATTTCTAACAAAATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS-3UTR CAA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGTACTTCCATGCTGTATaGGTCACCTGGCTGAACTTC +
Preference number: 5 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWYFHAV*VTWLNF
Trigger: GAAGTTCAGCCAGGTGACCAATACAGCATGGAAGTA...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACACTTCTTAAATACTCCTaGCTGCTGGCCGGCCATCGT +
Preference number: 5 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATLLKYS*LLAGHR
Trigger: ACGATGGCCGGCCAGCAGCAAGGAGTATTTAAGAAG...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS-3UTR CAA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACAAGCAATGAGGGCCTGTaGGATGGCATGGCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATSNEGL*DGMALL
Trigger: AAGAAGAGCCATGCCATCCAACAGGCCCTCATTGCT...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS-3UTR CAA 90 bp GTACTAATTAAAATCATCTTGGATTTGGAGGAGACAGAACAGAGACAAAGATGCCCCTCTTCCATCAGCTaGCTCAACAGGATGATCATG +
Preference number: 5 (lower is better)
Translates to: VLIKIILDLEETEQRQRCPSSIS*LNRMIM
Trigger: CATGATCATCCTGTTGAGCAAGCTGATGGAAGAGGG...GCATCTTTGTCTCTGTTCTGTCTCCTCCAAATCCAAGATGATTTTAATTAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CAA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAAAACGGTCTCTTTGGTTaGATAGGGGATGTCTGCCCT +
Preference number: 5 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKNGLFG*IGDVCP
Trigger: AGGGCAGACATCCCCTATCAAACCAAAGAGACCGTT...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAGGGCTGGCTGTTTTaGACATGTTCCTACAATGCC +
Preference number: 5 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWKGWLF*TCSYNA
Trigger: GGCATTGTAGGAACATGTCAAAAACAGCCAGCCCTT...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp ATAGCCTATTCCATTTTGTGGCAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGCCCAACAAGCTCTGGTaGGCATATTCTAGTCAAAAA +
Preference number: 5 (lower is better)
Translates to: IAYSILWQRFSEHWFCPRPNKLW*AYSSQK
Trigger: TTTTTGACTAGAATATGCCAACCAGAGCTTGTTGGG...CCTTGGACAAAACCAGTGCTCACTGAATCTTTGCCACAAAATGGAATAGGCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CAA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGGCTCCAGATCTAGTTTaGAGTGACAGACTGGGTAAT +
Preference number: 5 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWAPDLV*SDRLGN
Trigger: ATTACCCAGTCTGTCACTCAAAACTAGATCTGGAGC...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AAACAATTTCTGTATGACACCATCTGGGTTTACAGGAAGAGGGCCACTAGAACATTCCTACAATGCCTCTaGGAAAATCAATGTAGTGAC +
Preference number: 5 (lower is better)
Translates to: KQFLYDTIWVYRKRATRTFLQCL*ENQCSD
Trigger: GTCACTACATTGATTTTCCAAGAGGCATTGTAGGAA...TGTTCTAGTGGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAGAAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCTGAAAACCCTGAAACAGTTTTaGCTGCGTCTGACTTTAAAA +
Preference number: 5 (lower is better)
Translates to: EILGLSLMVPRDSNLLLKTLKQF*LRLTLK
Trigger: TTTTAAAGTCAGACGCAGCAAAAACTGTTTCAGGGT...TTTCAGAAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AAACAATTTCTGTATGACACCATCTGGGTTTACAGGAAGAGGGCCACTAGAACAGAGTCCCTAAGAACATaGCTGGAAAAGCACTTTAAA +
Preference number: 5 (lower is better)
Translates to: KQFLYDTIWVYRKRATRTESLRT*LEKHFK
Trigger: TTTAAAGTGCTTTTCCAGCAATGTTCTTAGGGACTC...TGTTCTAGTGGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAGAAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CAA 90 bp CAAATGAGCAGGAGCACTTTCCTGACAGACACTGAGAAATTCTTCAAAATGCAGATAGCCTATTCCATTTaGTGGCAAAGATTCAGTGAG +
Preference number: 5 (lower is better)
Translates to: QMSRSTFLTDTEKFFKMQIAYSI*WQRFSE
Trigger: CTCACTGAATCTTTGCCACAAAATGGAATAGGCTAT...CTGCATTTTGAAGAATTTCTCAGTGTCTGTCAGGAAAGTGCTCCTGCTCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS GCA 90 bp GTTTTCTGTTCCTGTGTTAATTCACTTAGGATACTGGCCTTCAGTTaGATCTATGTTGCTGCAAAGGACATGATTTTGTTCTTCTTACGG +
Preference number: 5 (lower is better)
Translates to: VFCSCVNSLRILAFS*IYVAAKDMILFFLR
Trigger: CCGTAAGAAGAACAAAATCATGTCCTTTGCAGCAACATAGATGCAACTGAAGGCCAGTATCCTAAGTGAATTAACACAGGAACAGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581143.1
CDS CCA 90 bp ACACTGTTTCCAAATTTCTCTCTGGGATCTTATTCAGACTATAGGTaGAAGCAGTCATGTTTTCATCTACTCGATACAAACAGGAGTCCA +
Preference number: 5 (lower is better)
Translates to: TLFPNFSLGSYSDYR*KQSCFHLLDTNRSP
Trigger: TGGACTCCTGTTTGTATCGAGTAGATGAAAACATGACTGCTTCCACCTATAGTCTGAATAAGATCCCAGAGAGAAATTTGGAAACAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACAAGACTGTCAAAGCTGTaGATCTGTGCTCGCTCTACT +
Preference number: 5 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATRLSKL*ICARST
Trigger: AGTAGAGCGAGCACAGATCAACAGCTTTGACAGTCT...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS-3UTR CAA 90 bp TTCAACATCCTGTTCCAGGTACTCCTCCTCGAATATATCCTGTACAGAGTATATAGAACGAATGCTCCTTaGTTTCGTTTCAGTTGCTTA +
Preference number: 5 (lower is better)
Translates to: FNILFQVLLLEYILYRVYRTNAP*FRFSCL
Trigger: TAAGCAACTGAAACGAAACAAAGGAGCATTCGTTCT...ATATACTCTGTACAGGATATATTCGAGGAGGAGTACCTGGAACAGGATGTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS-3UTR CAA 90 bp GAAATATTGGGACTCAGTCTCATGGTCCCAAGAGATTCCAATCTGCTTCTGAAATCAGGGTGGTATGAATaGAGTAAGTTTCATCTGAAA +
Preference number: 5 (lower is better)
Translates to: EILGLSLMVPRDSNLLLKSGWYE*SKFHLK
Trigger: TTTCAGATGAAACTTACTCAATTCATACCACCCTGA...TTTCAGAAGCAGATTGGAATCTCTTGGGACCATGAGACTGAGTCCCAATATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CAA 90 bp CAAAGATTCAGTGAGCACTGGTTTTGTCCAAGGCATTTCTGCAGTAGAAAAATAGTTGTGATCCACTGCTaGATGTCTTTCCTTTCCTTT +
Preference number: 5 (lower is better)
Translates to: QRFSEHWFCPRHFCSRKIVVIHC*MSFLSF
Trigger: AAAGGAAAGGAAAGACATCAAGCAGTGGATCACAAC...TATTTTTCTACTGCAGAAATGCCTTGGACAAAACCAGTGCTCACTGAATCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS-3UTR CAA 90 bp AAACAATTTCTGTATGACACCATCTGGGTTTACAGGAAGAGGGCCACTAGAACACAATTATGCGTTCATTaGGTACTGACTTTCAAAGCT +
Preference number: 5 (lower is better)
Translates to: KQFLYDTIWVYRKRATRTQLCVH*VLTFKA
Trigger: AGCTTTGAAAGTCAGTACCAAATGAACGCATAATTG...TGTTCTAGTGGCCCTCTTCCTGTAAACCCAGATGGTGTCATACAGAAATTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS TCA 90 bp GAATTTGGCCGTGGCATGAGATACAAAGGAATAGACTGTACTGATTaGGATAACACTGTTTCCAAATTTCTCTCTGGGATCTTATTCAGA +
Preference number: 5 (lower is better)
Translates to: EFGRGMRYKGIDCTD*DNTVSKFLSGILFR
Trigger: TCTGAATAAGATCCCAGAGAGAAATTTGGAAACAGTGTTATCTCAATCAGTACAGTCTATTCCTTTGTATCTCATGCCACGGCCAAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS TCA 90 bp CTGATCTCCTCTCCATCATGGTTTGATATACTCTACCCAGACTCATaGAGTAACACTGGAGATAAGAAAGAGTATGCATCGAAAATAAAG +
Preference number: 5 (lower is better)
Translates to: LISSPSWFDILYPDS*SNTGDKKEYASKIK
Trigger: CTTTATTTTCGATGCATACTCTTTCTTATCTCCAGTGTTACTTCATGAGTCTGGGTAGAGTATATCAAACCATGATGGAGAGGAGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS TCA 90 bp CCAATTGGTTCTCAAAGCATAGAATCTCAAACAGCAGCTTCAGTATaGTCTGAGATTTTGTTAGAAATGCAAATTCTTGACCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: PIGSQSIESQTAASV*SEILLEMQILDPLQ
Trigger: CTGGAGTGGGTCAAGAATTTGCATTTCTAACAAAATCTCAGATCATACTGAAGCTGCTGTTTGAGATTCTATGCTTTGAGAACCAATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS GCA 90 bp ATCATTTTAATGAGTTGCCTCCTCTCTCATTCATGGAAGCCAGAATaGAAGTGGTTAAGGAGTAATAAAGAGGTGAATGTAGCCAGTATA +
Preference number: 5 (lower is better)
Translates to: IILMSCLLSHSWKPE*KWLRSNKEVNVASI
Trigger: TATACTGGCTACATTCACCTCTTTATTACTCCTTAACCACTTGCATTCTGGCTTCCATGAATGAGAGAGGAGGCAACTCATTAAAATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS CCA 90 bp GTAGCTTTCCCTACACTTTTGGACTTAACCATCAGTGAATTGGTTTaGTTTGATCCACAATTTCCTTTTACATGCAGGACAACACAGAAA +
Preference number: 5 (lower is better)
Translates to: VAFPTLLDLTISELV*FDPQFPFTCRTTQK
Trigger: TTTCTGTGTTGTCCTGCATGTAAAAGGAAATTGTGGATCAAACCAAACCAATTCACTGATGGTTAAGTCCAAAAGTGTAGGGAAAGCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS-3UTR CAA 90 bp GAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGAAATTTCCCCAGCATATTTaGTGCGTTCCACATTTTCAG +
Preference number: 5 (lower is better)
Translates to: EKDNYTTRTSVKAIVSWKFPQHI*CVPHFQ
Trigger: CTGAAAATGTGGAACGCACAAAATATGCTGGGGAAA...TTTCCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp AAGGAAAAAGACAATTACACAACAAGAACATCAGTGAAAGCGATTGTCTCCTGGGGATCACAGAGAAATTaGGTTTTCTCTCCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: KEKDNYTTRTSVKAIVSWGSQRN*VFSPSS
Trigger: AGAAGAAGGAGAGAAAACCAAATTTCTCTGTGATCC...CCAGGAGACAATCGCTTTCACTGATGTTCTTGTTGTGTAATTGTCTTTTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS-3UTR CAA 90 bp GAAATATTTATTCCTAACTACTACAAGGATCACATAAAAAGGAGACAGGCCACAAAACACAACACATTCTaGAGGGCAACGTCCATGAGA +
Preference number: 5 (lower is better)
Translates to: EIFIPNYYKDHIKRRQATKHNTF*RATSMR
Trigger: TCTCATGGACGTTGCCCTCAAGAATGTGTTGTGTTT...TGTGGCCTGTCTCCTTTTTATGTGATCCTTGTAGTAGTTAGGAATAAATATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS TCA 90 bp CAACTCGCACCTTTCTATACCTATAATTTGAGGGACTTTGGCATTTaGGTAAAGTGCTTCATGGAGTTTAATCTCCTTATTATTCAGAGC +
Preference number: 5 (lower is better)
Translates to: QLAPFYTYNLRDFGI*VKCFMEFNLLIIQS
Trigger: GCTCTGAATAATAAGGAGATTAAACTCCATGAAGCACTTTACTCAAATGCCAAAGTCCCTCAAATTATAGGTATAGAAAGGTGCGAGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581143.1
CDS CCA 90 bp ATCCTAAAGCTTATCATTTTAATGAGTTGCCTCCTCTCTCATTCATaGAAGCCAGAATGCAAGTGGTTAAGGAGTAATAAAGAGGTGAAT +
Preference number: 5 (lower is better)
Translates to: ILKLIILMSCLLSHS*KPECKWLRSNKEVN
Trigger: ATTCACCTCTTTATTACTCCTTAACCACTTGCATTCTGGCTTCCATGAATGAGAGAGGAGGCAACTCATTAAAATGATAAGCTTTAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS TCA 90 bp ATTTGTAAGTCAAACACAGCAGGGACAATCACAGATATGATAAGTTaGACAATAGTCATAATATTGCTTGGTGGAGAACATAGAAGGGCA +
Preference number: 5 (lower is better)
Translates to: ICKSNTAGTITDMIS*TIVIILLGGEHRRA
Trigger: TGCCCTTCTATGTTCTCCACCAAGCAATATTATGACTATTGTTCAACTTATCATATCTGTGATTGTCCCTGCTGTGTTTGACTTACAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS-3UTR CAA 90 bp GTACTAATTAAAATCATCTTGGATTTGGAGGAGACAGAACAGAGACAAAGATGCAAAATGGTCTCCATTTaGTCATGCCAAATTCTCATG +
Preference number: 5 (lower is better)
Translates to: VLIKIILDLEETEQRQRCKMVSI*SCQILM
Trigger: CATGAGAATTTGGCATGACAAAATGGAGACCATTTT...GCATCTTTGTCTCTGTTCTGTCTCCTCCAAATCCAAGATGATTTTAATTAGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424789.6
CDS CCA 72 bp GTGCTGAATAGTGGCACTGCTCCTCGGCGGTTTGGCTaGGCCACTGCCGCCCCTTGTTCCAAGAGCAAACGG +
Preference number: 6 (lower is better)
Translates to: VLNSGTAPRRFG*ATAAPCSKSKR
Trigger: CCGTTTGCTCTTGGAACAAGGGGCGGCAGTGGCCCAGCCAAACCGCCGAGGAGCAGTGCCACTATTCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS TCA 72 bp GATCAACAATCTGCCAGTGGCCCTGGCGCACTGTGCTaGATAGTGGCACTGCTCCTCGGCGGTTTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: DQQSASGPGALC*IVALLLGGLAG
Trigger: CCCAGCCAAACCGCCGAGGAGCAGTGCCACTATTCAGCACAGTGCGCCAGGGCCACTGGCAGATTGTTGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS TCA 72 bp ACCTTGCCCAGAGCGGCTTTGGCGAGAGTCTACACTTaGCTGTCTTCGATCCGGTGGTTCCTCGCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: TLPRAALARVYT*LSSIRWFLAPS
Trigger: GGAGGGAGCGAGGAACCACCGGATCGAAGACAGTCAAGTGTAGACTCTCGCCAAAGCCGCTCTGGGCAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000580068.5
CDS GCA 72 bp CCACCTTGGCCCGTTTCTTGCACAGCAGCACCACAATaGTCAGGTACCCTGCTGCTGCAGCATATCCCAGGG +
Preference number: 6 (lower is better)
Translates to: PPWPVSCTAAPQ*SGTLLLQHIPG
Trigger: CCCTGGGATATGCTGCAGCAGCAGGGTACCTGAGCATTGTGGTGCTGCTGTGCAAGAAACGGGCCAAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000581143.1
ENST00000583356.5
CDS GCA 72 bp CCTTCGGAAGCAGCCATCATCAGGGGAGTGCGGCCCTaGTTGTCTGCCATGTTGACATCAGCTCCATGGGTG +
Preference number: 6 (lower is better)
Translates to: PSEAAIIRGVRP*LSAMLTSAPWV
Trigger: CACCCATGGAGCTGATGTCAACATGGCAGACAAGCAGGGCCGCACTCCCCTGATGATGGCTGCTTCCGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS GCA 72 bp AGCAGAGCTGGGCAGCCAGTACCTTGGCCCGTTTCTTaGACAGCAGCACCACAATGCTCAGGTACCCTGCTG +
Preference number: 6 (lower is better)
Translates to: SRAGQPVPWPVS*TAAPQCSGTLL
Trigger: CAGCAGGGTACCTGAGCATTGTGGTGCTGCTGTGCAAGAAACGGGCCAAGGTACTGGCTGCCCAGCTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS CCA 72 bp GGGGAGTCAGGCCACTTTCAGAAGAGGCATCCACGTTaGCCCCGAACTCCAGCAGCAGGGCTACCATTTCTG +
Preference number: 6 (lower is better)
Translates to: GESGHFQKRHPR*PRTPAAGLPFL
Trigger: CAGAAATGGTAGCCCTGCTGCTGGAGTTCGGGGCCAACGTGGATGCCTCTTCTGAAAGTGGCCTGACTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000581143.1
ENST00000583356.5
ENST00000583545.1
CDS CAA 72 bp CACCTTGCCCAGAGCGGCTTTGGCGAGAGTCTACACTaGACTGTCTTCGATCCGGTGGTTCCTCGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: HLAQSGFGESLH*TVFDPVVPRSL
Trigger: GAGGGAGCGAGGAACCACCGGATCGAAGACAGTCAAGTGTAGACTCTCGCCAAAGCCGCTCTGGGCAAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000580068.5
CDS CAA 72 bp CAGCAGAGCTGGGCAGCCAGTACCTTGGCCCGTTTCTaGCACAGCAGCACCACAATGCTCAGGTACCCTGCT +
Preference number: 6 (lower is better)
Translates to: QQSWAASTLARF*HSSTTMLRYPA
Trigger: AGCAGGGTACCTGAGCATTGTGGTGCTGCTGTGCAAGAAACGGGCCAAGGTACTGGCTGCCCAGCTCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS CAA 90 bp TGGAGATGCCACCTTGCCCAGAGCGGCTTTGGCGAGAGTCTACACTaGACTGTCTTCGATCCGGTGGTTCCTCGCTCCCTCCATCACTTG +
Preference number: 6 (lower is better)
Translates to: WRCHLAQSGFGESLH*TVFDPVVPRSLHHL
Trigger: CAAGTGATGGAGGGAGCGAGGAACCACCGGATCGAAGACAGTCAAGTGTAGACTCTCGCCAAAGCCGCTCTGGGCAAGGTGGCATCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS CAA 90 bp GAAGAAAAGCAGCAGAGCTGGGCAGCCAGTACCTTGGCCCGTTTCTaGCACAGCAGCACCACAATGCTCAGGTACCCTGCTGCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: EEKQQSWAASTLARF*HSSTTMLRYPAAAA
Trigger: TGCTGCAGCAGCAGGGTACCTGAGCATTGTGGTGCTGCTGTGCAAGAAACGGGCCAAGGTACTGGCTGCCCAGCTCTGCTGCTTTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS GCA 72 bp GCACAGCAGCACCACAATGCTCAGGTACCCTGCTGCTaGAGCATATCCCAGGGGAGTCAGGCCACTTTCAGA +
Preference number: 6 (lower is better)
Translates to: AQQHHNAQVPCC*SISQGSQATFR
Trigger: TCTGAAAGTGGCCTGACTCCCCTGGGATATGCTGCAGCAGCAGGGTACCTGAGCATTGTGGTGCTGCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000581143.1
ENST00000583356.5
ENST00000583545.1
CDS GCA 72 bp CTTGCACAGCAGCACCACAATGCTCAGGTACCCTGCTaGTGCAGCATATCCCAGGGGAGTCAGGCCACTTTC +
Preference number: 6 (lower is better)
Translates to: LAQQHHNAQVPC*CSISQGSQATF
Trigger: GAAAGTGGCCTGACTCCCCTGGGATATGCTGCAGCAGCAGGGTACCTGAGCATTGTGGTGCTGCTGTGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000581143.1
ENST00000583356.5
ENST00000583545.1
CDS GCA 72 bp AGCCTGCCCCACGCGAGGGCAGCAAAGCCTGCGTGCTaGATGTGGGCAAGCAATGGCTCAGTTTGGAATTAT +
Preference number: 6 (lower is better)
Translates to: SLPHARAAKPAC*MWASNGSVWNY
Trigger: ATAATTCCAAACTGAGCCATTGCTTGCCCACATGCAGCACGCAGGCTTTGCTGCCCTCGCGTGGGGCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579541.1
CDS GCA 72 bp GTACCTTGGCCCGTTTCTTGCACAGCAGCACCACAATaGTCAGGTACCCTGCTGCTGCAGCATATCCCAGGG +
Preference number: 6 (lower is better)
Translates to: VPWPVSCTAAPQ*SGTLLLQHIPG
Trigger: CCCTGGGATATGCTGCAGCAGCAGGGTACCTGAGCATTGTGGTGCTGCTGTGCAAGAAACGGGCCAAGGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS CAA 72 bp TCGGAAGCAGCCATCATCAGGGGAGTGCGGCCCTGCTaGTCTGCCATGTTGACATCAGCTCCATGGGTGAGT +
Preference number: 6 (lower is better)
Translates to: SEAAIIRGVRPC*SAMLTSAPWVS
Trigger: ACTCACCCATGGAGCTGATGTCAACATGGCAGACAAGCAGGGCCGCACTCCCCTGATGATGGCTGCTTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS GCA 72 bp TTTCTTGCACAGCAGCACCACAATGCTCAGGTACCCTaGTGCTGCAGCATATCCCAGGGGAGTCAGGCCACT +
Preference number: 6 (lower is better)
Translates to: FLAQQHHNAQVP*CCSISQGSQAT
Trigger: AGTGGCCTGACTCCCCTGGGATATGCTGCAGCAGCAGGGTACCTGAGCATTGTGGTGCTGCTGTGCAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000581143.1
ENST00000583356.5
ENST00000583545.1
CDS GCA 72 bp GCTCCTGCAGGATGGATGGCAGTGGCCCTGCACATATaGAGAACCAGCACTCTCTCTGATCTCCTCTCCATC +
Preference number: 6 (lower is better)
Translates to: APAGWMAVALHI*RTSTLSDLLSI
Trigger: GATGGAGAGGAGATCAGAGAGAGTGCTGGTTCTGCATATGTGCAGGGCCACTGCCATCCATCCTGCAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS CCA 72 bp ATGCTGGCTGCAGCAATGAGGGCCTGTTGGATGGCATaGCTCTTCTTAAATACTCCTTGCTGCTGGCCGGCC +
Preference number: 6 (lower is better)
Translates to: MLAAAMRACWMA*LFLNTPCCWPA
Trigger: GGCCGGCCAGCAGCAAGGAGTATTTAAGAAGAGCCATGCCATCCAACAGGCCCTCATTGCTGCAGCCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000581143.1
ENST00000583016.1
ENST00000583356.5
CDS CCA 72 bp GGGAAGAAAAGCAGCAGAGCTGGGCAGCCAGTACCTTaGCCCGTTTCTTGCACAGCAGCACCACAATGCTCA +
Preference number: 6 (lower is better)
Translates to: GKKSSRAGQPVP*PVSCTAAPQCS
Trigger: TGAGCATTGTGGTGCTGCTGTGCAAGAAACGGGCCAAGGTACTGGCTGCCCAGCTCTGCTGCTTTTCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS CAA 72 bp AGGGAAGAAAAGCAGCAGAGCTGGGCAGCCAGTACCTaGGCCCGTTTCTTGCACAGCAGCACCACAATGCTC +
Preference number: 6 (lower is better)
Translates to: REEKQQSWAAST*ARFLHSSTTML
Trigger: GAGCATTGTGGTGCTGCTGTGCAAGAAACGGGCCAAGGTACTGGCTGCCCAGCTCTGCTGCTTTTCTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS TCA 72 bp TGTGGCAGCTCCGTTATCCACCAGAGAACGTACTACTaGGAGATGGCCCTTCAAACAAGCCCAGCTGAGGGC +
Preference number: 6 (lower is better)
Translates to: CGSSVIHQRTYY*EMALQTSPAEG
Trigger: GCCCTCAGCTGGGCTTGTTTGAAGGGCCATCTCTCAGTAGTACGTTCTCTGGTGGATAACGGAGCTGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS TCA 72 bp GAAGTCTCTGGATCTCACGGTTGTTGGGACACAGCTTaGTGGCCTCGTTCAGGTCCTCTAAGGCTGCTGCGA +
Preference number: 6 (lower is better)
Translates to: EVSGSHGCWDTA*WPRSGPLRLLR
Trigger: TCGCAGCAGCCTTAGAGGACCTGAACGAGGCCATCAAGCTGTGTCCCAACAACCGTGAGATCCAGAGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS TCA 72 bp GCATCACCAGGGCAGTATGCATCCACGTCCAGTTTCTaGGCTGAAGTGAGGGTTGGTGAGCCAAGCTCGGAT +
Preference number: 6 (lower is better)
Translates to: ASPGQYASTSSF*AEVRVGEPSSD
Trigger: ATCCGAGCTTGGCTCACCAACCCTCACTTCAGCTCAGAAACTGGACGTGGATGCATACTGCCCTGGTGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580068.5
CDS GCA 72 bp GATATGCTCATCAGTCAGTGGGTGGAGAGAGGCCACTaGCACATTCAGGAGAGGCATCACCCGGTCAAAGGA +
Preference number: 6 (lower is better)
Translates to: DMLISQWVERGH*HIQERHHPVKG
Trigger: TCCTTTGACCGGGTGATGCCTCTCCTGAATGTGGCAGTGGCCTCTCTCCACCCACTGACTGATGAGCATATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
ENST00000583545.1
CDS GCA 72 bp AGAGAGCGAGACATGCCCTCCATAATCCGAATGTGCTaGATACCTTCACTCACTGGAAGTGGCGGGACAGCG +
Preference number: 6 (lower is better)
Translates to: RERDMPSIIRMC*IPSLTGSGGTA
Trigger: CGCTGTCCCGCCACTTCCAGTGAGTGAAGGTATGCAGCACATTCGGATTATGGAGGGCATGTCTCGCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580068.5
ENST00000580466.1
CDS GCA 72 bp AGGCTTAGAGCCTGCAGGTGTCATTTGGTCCAGACCTaGCACTGCAGTCTCCTGGCTTCCTCACTTCTCCTT +
Preference number: 6 (lower is better)
Translates to: RLRACRCHLVQT*HCSLLASSLLL
Trigger: AAGGAGAAGTGAGGAAGCCAGGAGACTGCAGTGGCAGGTCTGGACCAAATGACACCTGCAGGCTCTAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS CCA 72 bp CTTTCTGTGGAGATGCCACCTTGCCCAGAGCGGCTTTaGCGAGAGTCTACACTTGACTGTCTTCGATCCGGT +
Preference number: 6 (lower is better)
Translates to: LSVEMPPCPERL*RESTLDCLRSG
Trigger: ACCGGATCGAAGACAGTCAAGTGTAGACTCTCGCCAAAGCCGCTCTGGGCAAGGTGGCATCTCCACAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000580068.5
ENST00000580466.1
CDS CCA 72 bp ACCTTCACTCACTGGAAGTGGCGGGACAGCGTAGTCTaGCTCAAAAGCACAGTCGCTTTCTGTGGAGATGCC +
Preference number: 6 (lower is better)
Translates to: TFTHWKWRDSVV*LKSTVAFCGDA
Trigger: GGCATCTCCACAGAAAGCGACTGTGCTTTTGAGCCAGACTACGCTGTCCCGCCACTTCCAGTGAGTGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000580068.5
ENST00000580466.1
CDS CCA 72 bp AAGGGCGCATTCCACTGTAGTCAACGTGCTCGATCATaGCCCCATGATCTACCAGGAACTGGACCACCTCAG +
Preference number: 6 (lower is better)
Translates to: KGAFHCSQRARS*PHDLPGTGPPQ
Trigger: CTGAGGTGGTCCAGTTCCTGGTAGATCATGGGGCCATGATCGAGCACGTTGACTACAGTGGAATGCGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS CAA 72 bp AGAAGTCTCTGGATCTCACGGTTGTTGGGACACAGCTaGATGGCCTCGTTCAGGTCCTCTAAGGCTGCTGCG +
Preference number: 6 (lower is better)
Translates to: RSLWISRLLGHS*MASFRSSKAAA
Trigger: CGCAGCAGCCTTAGAGGACCTGAACGAGGCCATCAAGCTGTGTCCCAACAACCGTGAGATCCAGAGACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS CAA 90 bp AGATGGCCTTCGGAAGCAGCCATCATCAGGGGAGTGCGGCCCTGCTaGTCTGCCATGTTGACATCAGCTCCATGGGTGAGTAAAAGATCA +
Preference number: 6 (lower is better)
Translates to: RWPSEAAIIRGVRPC*SAMLTSAPWVSKRS
Trigger: TGATCTTTTACTCACCCATGGAGCTGATGTCAACATGGCAGACAAGCAGGGCCGCACTCCCCTGATGATGGCTGCTTCCGAAGGCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS CAA 90 bp ACTCTCAGCAGAAGTCTCTGGATCTCACGGTTGTTGGGACACAGCTaGATGGCCTCGTTCAGGTCCTCTAAGGCTGCTGCGAACTGTCTG +
Preference number: 6 (lower is better)
Translates to: TLSRSLWISRLLGHS*MASFRSSKAAANCL
Trigger: CAGACAGTTCGCAGCAGCCTTAGAGGACCTGAACGAGGCCATCAAGCTGTGTCCCAACAACCGTGAGATCCAGAGACTTCTGCTGAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS TCA 72 bp TGCTTACCAGGGCAGTATGCATCCACGTCCAGTTTCTaGGCTGAAGTGAGGGTTGGTGAGCCAAGCTCGGAT +
Preference number: 6 (lower is better)
Translates to: CLPGQYASTSSF*AEVRVGEPSSD
Trigger: ATCCGAGCTTGGCTCACCAACCCTCACTTCAGCTCAGAAACTGGACGTGGATGCATACTGCCCTGGTAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS GCA 72 bp GGAAGAGAGCGAGACATGCCCTCCATAATCCGAATGTaGTGCATACCTTCACTCACTGGAAGTGGCGGGACA +
Preference number: 6 (lower is better)
Translates to: GRERDMPSIIRM*CIPSLTGSGGT
Trigger: TGTCCCGCCACTTCCAGTGAGTGAAGGTATGCAGCACATTCGGATTATGGAGGGCATGTCTCGCTCTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580068.5
ENST00000580466.1
CDS GCA 72 bp CAAGCACCTCTCAAAGGGTTTAGAACTGTGTGCTCCTaGAGGATGGATGGCAGTGGCCCTGCACATATGCAG +
Preference number: 6 (lower is better)
Translates to: QAPLKGFRTVCS*RMDGSGPAHMQ
Trigger: CTGCATATGTGCAGGGCCACTGCCATCCATCCTGCAGGAGCACACAGTTCTAAACCCTTTGAGAGGTGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS GCA 72 bp GTTTCCCAAGCACCTCTCAAAGGGTTTAGAACTGTGTaGTCCTGCAGGATGGATGGCAGTGGCCCTGCACAT +
Preference number: 6 (lower is better)
Translates to: VSQAPLKGFRTV*SCRMDGSGPAH
Trigger: ATGTGCAGGGCCACTGCCATCCATCCTGCAGGAGCACACAGTTCTAAACCCTTTGAGAGGTGCTTGGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS GCA 72 bp ATACCTATACTCCTGGCTACTGGGGAGGCTGAAGACTaGAGTGAGCTACAATCATGCCACTGCACTCTGGCC +
Preference number: 6 (lower is better)
Translates to: IPILLATGEAED*SELQSCHCTLA
Trigger: GGCCAGAGTGCAGTGGCATGATTGTAGCTCACTGCAGTCTTCAGCCTCCCCAGTAGCCAGGAGTATAGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS CCA 72 bp GTCATTGAGAGGCCTACGTCTCAGTTCCCAAAGGAGTaGAGGAGTCCCACTTTCTCCCCTCGTAACAGCACT +
Preference number: 6 (lower is better)
Translates to: VIERPTSQFPKE*RSPTFSPRNST
Trigger: AGTGCTGTTACGAGGGGAGAAAGTGGGACTCCTCCACTCCTTTGGGAACTGAGACGTAGGCCTCTCAATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS CAA 72 bp TCCACTCTCAGCAGAAGTCTCTGGATCTCACGGTTGTaGGGACACAGCTTGATGGCCTCGTTCAGGTCCTCT +
Preference number: 6 (lower is better)
Translates to: STLSRSLWISRL*GHSLMASFRSS
Trigger: AGAGGACCTGAACGAGGCCATCAAGCTGTGTCCCAACAACCGTGAGATCCAGAGACTTCTGCTGAGAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS CAA 72 bp TCTTCCACTCTCAGCAGAAGTCTCTGGATCTCACGGTaGTTGGGACACAGCTTGATGGCCTCGTTCAGGTCC +
Preference number: 6 (lower is better)
Translates to: SSTLSRSLWISR*LGHSLMASFRS
Trigger: GGACCTGAACGAGGCCATCAAGCTGTGTCCCAACAACCGTGAGATCCAGAGACTTCTGCTGAGAGTGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS CAA 90 bp GACAATCTCAGTATAACCCATGCTGGCTGCAGCAATGAGGGCCTGTaGGATGGCATGGCTCTTCTTAAATACTCCTTGCTGCTGGCCGGC +
Preference number: 6 (lower is better)
Translates to: DNLSITHAGCSNEGL*DGMALLKYSLLLAG
Trigger: GCCGGCCAGCAGCAAGGAGTATTTAAGAAGAGCCATGCCATCCAACAGGCCCTCATTGCTGCAGCCAGCATGGGTTATACTGAGATTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583016.1
ENST00000583356.5
CDS CAA 90 bp GAAGCAGCCATCATCAGGGGAGTGCGGCCCTGCTTGTCTGCCATGTaGACATCAGCTCCATGGGTGAGTAAAAGATCAACAATCTGCCAG +
Preference number: 6 (lower is better)
Translates to: EAAIIRGVRPCLSAM*TSAPWVSKRSTICQ
Trigger: CTGGCAGATTGTTGATCTTTTACTCACCCATGGAGCTGATGTCAACATGGCAGACAAGCAGGGCCGCACTCCCCTGATGATGGCTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS CAA 90 bp CACTCTTCTTCCACTCTCAGCAGAAGTCTCTGGATCTCACGGTTGTaGGGACACAGCTTGATGGCCTCGTTCAGGTCCTCTAAGGCTGCT +
Preference number: 6 (lower is better)
Translates to: HSSSTLSRSLWISRL*GHSLMASFRSSKAA
Trigger: AGCAGCCTTAGAGGACCTGAACGAGGCCATCAAGCTGTGTCCCAACAACCGTGAGATCCAGAGACTTCTGCTGAGAGTGGAAGAAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS CAA 90 bp TCTTACCTCAGTATAACCCATGCTGGCTGCAGCAATGAGGGCCTGTaGGATGGCATGGCTCTTCTTAAATACTCCTTGCTGCTGGCCGGC +
Preference number: 6 (lower is better)
Translates to: SYLSITHAGCSNEGL*DGMALLKYSLLLAG
Trigger: GCCGGCCAGCAGCAAGGAGTATTTAAGAAGAGCCATGCCATCCAACAGGCCCTCATTGCTGCAGCCAGCATGGGTTATACTGAGGTAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581143.1
CDS CAA 90 bp ACTCTCAGCAGAAGTCTCTGGATCTCACGGTTGTTGGGACACAGCTaGATGGCCTCGTTCAGGTCCTCTAAGGCTGCTGCGAACTGTGTT +
Preference number: 6 (lower is better)
Translates to: TLSRSLWISRLLGHS*MASFRSSKAAANCV
Trigger: AACACAGTTCGCAGCAGCCTTAGAGGACCTGAACGAGGCCATCAAGCTGTGTCCCAACAACCGTGAGATCCAGAGACTTCTGCTGAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS TCA 72 bp GGCCGGCCATCGTCCAGTCACACTGAATCAAAAACTTaGCAACCTCCAGATGACCTCGGAGTGCAGCATGAA +
Preference number: 6 (lower is better)
Translates to: GRPSSSHTESKT*QPPDDLGVQHE
Trigger: TTCATGCTGCACTCCGAGGTCATCTGGAGGTTGTCAAGTTTTTGATTCAGTGTGACTGGACGATGGCCGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000581143.1
ENST00000583016.1
ENST00000583356.5
CDS TCA 72 bp GGCAGTATGCATCCACGTCCAGTTTCTGAGCTGAAGTaGGGGTTGGTGAGCCAAGCTCGGATTCTGGAATTC +
Preference number: 6 (lower is better)
Translates to: GSMHPRPVSELK*GLVSQARILEF
Trigger: GAATTCCAGAATCCGAGCTTGGCTCACCAACCCTCACTTCAGCTCAGAAACTGGACGTGGATGCATACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580068.5
ENST00000581424.1
CDS GCA 72 bp CGTTCTTATCCAAATGATCCACCTTGGCCCGTTTCTTaGACAGCAGCACCACAATGCTCAGGTACCCTGCTG +
Preference number: 6 (lower is better)
Translates to: RSYPNDPPWPVS*TAAPQCSGTLL
Trigger: CAGCAGGGTACCTGAGCATTGTGGTGCTGCTGTGCAAGAAACGGGCCAAGGTGGATCATTTGGATAAGAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000581143.1
ENST00000583356.5
CDS CCA 72 bp CCCCACGCGAGGGCAGCAAAGCCTGCGTGCTGCATGTaGGCAAGCAATGGCTCAGTTTGGAATTATTTTAAA +
Preference number: 6 (lower is better)
Translates to: PHARAAKPACCM*ASNGSVWNYFK
Trigger: TTTAAAATAATTCCAAACTGAGCCATTGCTTGCCCACATGCAGCACGCAGGCTTTGCTGCCCTCGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579541.1
CDS CCA 72 bp CTCCATAATCCGAATGTGCTGCATACCTTCACTCACTaGAAGTGGCGGGACAGCGTAGTCTGGCTCAAAAGC +
Preference number: 6 (lower is better)
Translates to: LHNPNVLHTFTH*KWRDSVVWLKS
Trigger: GCTTTTGAGCCAGACTACGCTGTCCCGCCACTTCCAGTGAGTGAAGGTATGCAGCACATTCGGATTATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580068.5
ENST00000580466.1
CDS CAA 90 bp CTACACTCTTCTTCCACTCTCAGCAGAAGTCTCTGGATCTCACGGTaGTTGGGACACAGCTTGATGGCCTCGTTCAGGTCCTCTAAGGCT +
Preference number: 6 (lower is better)
Translates to: LHSSSTLSRSLWISR*LGHSLMASFRSSKA
Trigger: AGCCTTAGAGGACCTGAACGAGGCCATCAAGCTGTGTCCCAACAACCGTGAGATCCAGAGACTTCTGCTGAGAGTGGAAGAAGAGTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS CAA 90 bp GTTTTCTTCTCTACACATGAAAGGCTTAGAGCCTGCAGGTGTCATTaGGTCCAGACCTGCCACTGCAGTCTCCTGGCTTCCTCACTTCTC +
Preference number: 6 (lower is better)
Translates to: VFFSTHERLRACRCH*VQTCHCSLLASSLL
Trigger: GAGAAGTGAGGAAGCCAGGAGACTGCAGTGGCAGGTCTGGACCAAATGACACCTGCAGGCTCTAAGCCTTTCATGTGTAGAGAAGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS CAA 90 bp AGGCTGCTGCGAACTGTGTTCATTTTCCTGCGACACCGAGAGAGGTaGAGGAGGAGAGACACCTTTAGTTCCCGGAAAGTTTTCAAGTCC +
Preference number: 6 (lower is better)
Translates to: RLLRTVFIFLRHRER*RRRDTFSSRKVFKS
Trigger: GGACTTGAAAACTTTCCGGGAACTAAAGGTGTCTCTCCTCCTCAACCTCTCTCGGTGTCGCAGGAAAATGAACACAGTTCGCAGCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583356.5
CDS CAA 72 bp ATCATCAGGGGAGTGCGGCCCTGCTTGTCTGCCATGTaGACATCAGCTCCATGGGTGAGTAAAAGATCAACA +
Preference number: 6 (lower is better)
Translates to: IIRGVRPCLSAM*TSAPWVSKRST
Trigger: TGTTGATCTTTTACTCACCCATGGAGCTGATGTCAACATGGCAGACAAGCAGGGCCGCACTCCCCTGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS CAA 90 bp CTGCCACATTCAGGAGAGGCATCACCCGGTCAAAGGAAGACTGGGTaGGGAACTTCATATTGCACTGGAGTAAATAAACCTCTGAGAGCG +
Preference number: 6 (lower is better)
Translates to: LPHSGEASPGQRKTG*GTSYCTGVNKPLRA
Trigger: CGCTCTCAGAGGTTTATTTACTCCAGTGCAATATGAAGTTCCCAACCCAGTCTTCCTTTGACCGGGTGATGCCTCTCCTGAATGTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
ENST00000583545.1
CDS CAA 90 bp GCTGCAGCTGTTAGGGCTGTCTCTCCCCAGAGACTGTCAAAGCTGTaGATCTGTGCTCGCTCTACTTCCTCTTCATCTTTTTCTGGAAGA +
Preference number: 6 (lower is better)
Translates to: AAAVRAVSPQRLSKL*ICARSTSSSSFSGR
Trigger: TCTTCCAGAAAAAGATGAAGAGGAAGTAGAGCGAGCACAGATCAACAGCTTTGACAGTCTCTGGGGAGAGACAGCCCTAACAGCTGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS CAA 90 bp AATAAGGGGGTGAGATTCGAGAGTCCACACAAACACAACACATTCTaGAGGGCAACGTCCATGAGAGGTACCTGTCTCTCCCCAGAGACT +
Preference number: 6 (lower is better)
Translates to: NKGVRFESPHKHNTF*RATSMRGTCLSPET
Trigger: AGTCTCTGGGGAGAGACAGGTACCTCTCATGGACGTTGCCCTCAAGAATGTGTTGTGTTTGTGTGGACTCTCGAATCTCACCCCCTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS TCA 72 bp CTTCCATGCTGTATTGGTCACCTGGCTGAACTTCTGTaGCTTTCTCTCCAAGGAGGAAACCCAGACGAGTCA +
Preference number: 6 (lower is better)
Translates to: LPCCIGHLAELL*LSLQGGNPDES
Trigger: TGACTCGTCTGGGTTTCCTCCTTGGAGAGAAAGTCACAGAAGTTCAGCCAGGTGACCAATACAGCATGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS GCA 72 bp TTCGTAAAGACGCCAGTGCCATGGAAAGACCTTCTGTaGTATAAGAGATCCAGAGACCTTGGAGGATGGAGG +
Preference number: 6 (lower is better)
Translates to: FVKTPVPWKDLL*YKRSRDLGGWR
Trigger: CCTCCATCCTCCAAGGTCTCTGGATCTCTTATAGCACAGAAGGTCTTTCCATGGCACTGGCGTCTTTACGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
ENST00000583545.1
CDS GCA 72 bp GGCTGCTGCGAACTGTCTGCTGCTGCGTTTTGCCCTTaGTCTCGCATAGTAAGCTTCATAAGATTTCGGTTT +
Preference number: 6 (lower is better)
Translates to: GCCELSAAAFCP*SRIVSFIRFRF
Trigger: AAACCGAAATCTTATGAAGCTTACTATGCGAGAGCAAGGGCAAAACGCAGCAGCAGACAGTTCGCAGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS CCA 72 bp AATGATGCCACTATCTCTGCTTTCAAGGGTAGAGGTTaGACTAGTAACAGCCCCATAGCTGCAGTCCTTGGC +
Preference number: 6 (lower is better)
Translates to: NDATISAFKGRG*TSNSPIAAVLG
Trigger: GCCAAGGACTGCAGCTATGGGGCTGTTACTAGTCCAACCTCTACCCTTGAAAGCAGAGATAGTGGCATCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS CAA 72 bp AATCCTGCTGTGTGCGAGCACCACCCATGCTCTGTCTaGGCATTCGTAGAGAAGTTCTCAAAGGTGTATGTC +
Preference number: 6 (lower is better)
Translates to: NPAVCEHHPCSV*AFVEKFSKVYV
Trigger: GACATACACCTTTGAGAACTTCTCTACGAATGCCAAGACAGAGCATGGGTGGTGCTCGCACACAGCAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS CAA 72 bp AGGCTGCTGCGAACTGTCTGCTGCTGCGTTTTGCCCTaGCTCTCGCATAGTAAGCTTCATAAGATTTCGGTT +
Preference number: 6 (lower is better)
Translates to: RLLRTVCCCVLP*LSHSKLHKISV
Trigger: AACCGAAATCTTATGAAGCTTACTATGCGAGAGCAAGGGCAAAACGCAGCAGCAGACAGTTCGCAGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389520.8
ENST00000424789.6
CDS CAA 90 bp GTGAGCCAAGCTCGGATTCTGGAATTCGTGGGCTCTCAACAAACTTaGCCTTCCTCAGAGGGGCTAAGAACAAAAAGAGAGAGAGAGCAA +
Preference number: 6 (lower is better)
Translates to: VSQARILEFVGSQQT*PSSEGLRTKREREQ
Trigger: TTGCTCTCTCTCTCTTTTTGTTCTTAGCCCCTCTGAGGAAGGCAAAGTTTGTTGAGAGCCCACGAATTCCAGAATCCGAGCTTGGCTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS TCA 72 bp TCATCCTGTACTTCCATGCTGTATTGGTCACCTGGCTaGACTTCTGTGACTTTCTCTCCAAGGAGGAAACCC +
Preference number: 6 (lower is better)
Translates to: SSCTSMLYWSPG*TSVTFSPRRKP
Trigger: GGGTTTCCTCCTTGGAGAGAAAGTCACAGAAGTTCAGCCAGGTGACCAATACAGCATGGAAGTACAGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS TCA 72 bp CTGAACAGCAGGAAAGACCCAGCTAAGATCAGAATATaGAGTGACAGCAATAGTAAGAAGGGCTGGCTGCCG +
Preference number: 6 (lower is better)
Translates to: LNSRKDPAKIRI*SDSNSKKGWLP
Trigger: CGGCAGCCAGCCCTTCTTACTATTGCTGTCACTTCATATTCTGATCTTAGCTGGGTCTTTCCTGCTGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS GCA 72 bp GAACTCTTAAATCCTGCTGTGTGCGAGCACCACCCATaGTCTGTCTTGGCATTCGTAGAGAAGTTCTCAAAG +
Preference number: 6 (lower is better)
Translates to: ELLNPAVCEHHP*SVLAFVEKFSK
Trigger: CTTTGAGAACTTCTCTACGAATGCCAAGACAGAGCATGGGTGGTGCTCGCACACAGCAGGATTTAAGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS GCA 72 bp TATAAGGTGCAAAGCGAACTCTTAAATCCTGCTGTGTaGGAGCACCACCCATGCTCTGTCTTGGCATTCGTA +
Preference number: 6 (lower is better)
Translates to: YKVQSELLNPAV*EHHPCSVLAFV
Trigger: TACGAATGCCAAGACAGAGCATGGGTGGTGCTCGCACACAGCAGGATTTAAGAGTTCGCTTTGCACCTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS GCA 72 bp AATCCTCCCTCTTTCAAAGCAGACACTTTGCATGCATaGTTACCAGGGCAGTATGCATCCACGTCCAGTTTC +
Preference number: 6 (lower is better)
Translates to: NPPSFKADTLHA*LPGQYASTSSF
Trigger: GAAACTGGACGTGGATGCATACTGCCCTGGTAAGCATGCATGCAAAGTGTCTGCTTTGAAAGAGGGAGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS CAA 72 bp GTTAGGGCTGTCTCTCCCCAGAGACTGTCAAAGCTGTaGATCTGTGCTCGCTCTACTTCCTCTTCATCTTTT +
Preference number: 6 (lower is better)
Translates to: VRAVSPQRLSKL*ICARSTSSSSF
Trigger: AAAAGATGAAGAGGAAGTAGAGCGAGCACAGATCAACAGCTTTGACAGTCTCTGGGGAGAGACAGCCCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS CAA 72 bp GAGGTACCTGTCTCTCCCCAGAGACTGTCAAAGCTGTaGATCTGTGCTCGCTCTACTTCCTCTTCATCTTTT +
Preference number: 6 (lower is better)
Translates to: EVPVSPQRLSKL*ICARSTSSSSF
Trigger: AAAAGATGAAGAGGAAGTAGAGCGAGCACAGATCAACAGCTTTGACAGTCTCTGGGGAGAGACAGGTACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS CAA 90 bp GAACTCTTAAATCCTGCTGTGTGCGAGCACCACCCATGCTCTGTCTaGGCATTCGTAGAGAAGTTCTCAAAGGTGTATGTCTCTGCTCAT +
Preference number: 6 (lower is better)
Translates to: ELLNPAVCEHHPCSV*AFVEKFSKVYVSAH
Trigger: ATGAGCAGAGACATACACCTTTGAGAACTTCTCTACGAATGCCAAGACAGAGCATGGGTGGTGCTCGCACACAGCAGGATTTAAGAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS TCA 72 bp GCACAATCACTGTGCTACAGTAAACTTCTAAGGCTCTaGGATGTCATTGAGAGGCCTACGTCTCAGTTCCCA +
Preference number: 6 (lower is better)
Translates to: AQSLCYSKLLRL*DVIERPTSQFP
Trigger: TGGGAACTGAGACGTAGGCCTCTCAATGACATCTCAGAGCCTTAGAAGTTTACTGTAGCACAGTGATTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS TCA 72 bp GCATTGTCATGGCATCAGAGTAACTGTTTTACCTGCTaGGTTCTGACAAAGACAGCACAGGTCCCTGCTCAA +
Preference number: 6 (lower is better)
Translates to: ALSWHQSNCFTC*VLTKTAQVPAQ
Trigger: TTGAGCAGGGACCTGTGCTGTCTTTGTCAGAACTCAGCAGGTAAAACAGTTACTCTGATGCCATGACAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS TCA 72 bp AGTATACATGCAAAACACTGCTCTGCTGGATGGGCCTaGTCCAATCCTCCCTCTTTCAAAGCAGACACTTTG +
Preference number: 6 (lower is better)
Translates to: SIHAKHCSAGWA*SNPPSFKADTL
Trigger: CAAAGTGTCTGCTTTGAAAGAGGGAGGATTGGATCAGGCCCATCCAGCAGAGCAGTGTTTTGCATGTATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS GCA 72 bp AATCAAAAACTTGACAACCTCCAGATGACCTCGGAGTaGAGCATGAACCAAAGCACACTGCCCGTTCTTATC +
Preference number: 6 (lower is better)
Translates to: NQKLDNLQMTSE*SMNQSTLPVLI
Trigger: GATAAGAACGGGCAGTGTGCTTTGGTTCATGCTGCACTCCGAGGTCATCTGGAGGTTGTCAAGTTTTTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000581143.1
ENST00000583016.1
ENST00000583356.5
CDS GCA 72 bp TGTCTCTCCCCAGAGACTGTCAAAGCTGTTGATCTGTaGTCGCTCTACTTCCTCTTCATCTTTTTCTGGAAG +
Preference number: 6 (lower is better)
Translates to: CLSPETVKAVDL*SLYFLFIFFWK
Trigger: CTTCCAGAAAAAGATGAAGAGGAAGTAGAGCGAGCACAGATCAACAGCTTTGACAGTCTCTGGGGAGAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583016.1
ENST00000583356.5
CDS CCA 72 bp AGGGCAGTGAATGTACAGGTTTGTTTCATGGTGTACTaGATGATGCCGAGGTTTGGGACACAAAAGTTCCCA +
Preference number: 6 (lower is better)
Translates to: RAVNVQVCFMVY*MMPRFGTQKFP
Trigger: TGGGAACTTTTGTGTCCCAAACCTCGGCATCATCCAGTACACCATGAAACAAACCTGTACATTCACTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581143.1
CDS CAA 72 bp TCAGGAGAGGCATCACCCGGTCAAAGGAAGACTGGGTaGGGAACTTCATATTGCACTGGAGTAAATAAACCT +
Preference number: 6 (lower is better)
Translates to: SGEASPGQRKTG*GTSYCTGVNKP
Trigger: AGGTTTATTTACTCCAGTGCAATATGAAGTTCCCAACCCAGTCTTCCTTTGACCGGGTGATGCCTCTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
ENST00000583545.1
CDS CAA 72 bp TTCCTTTCCCCTCCCAGTAGTCCCCAGTGTCTACTGTaGCCTCTTTATGTCCATAGGTACTCAATGTTTAGC +
Preference number: 6 (lower is better)
Translates to: FLSPPSSPQCLL*PLYVHRYSMFS
Trigger: GCTAAACATTGAGTACCTATGGACATAAAGAGGCAACAGTAGACACTGGGGACTACTGGGAGGGGAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581143.1
CDS CCA 72 bp TTGGAGTGTAGAGATTTCGTAAAGACGCCAGTGCCATaGAAAGACCTTCTGTGCTATAAGAGATCCAGAGAC +
Preference number: 6 (lower is better)
Translates to: LECRDFVKTPVP*KDLLCYKRSRD
Trigger: GTCTCTGGATCTCTTATAGCACAGAAGGTCTTTCCATGGCACTGGCGTCTTTACGAAATCTCTACACTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
ENST00000583545.1
CDS TCA 72 bp ATGAATAGCGAGGCTGGGACTCAAATCTGGTCCTTCTaGGATTCTAAATGTTATGCTGTTCCTGTGCCACAT +
Preference number: 6 (lower is better)
Translates to: MNSEAGTQIWSF*DSKCYAVPVPH
Trigger: ATGTGGCACAGGAACAGCATAACATTTAGAATCTCAGAAGGACCAGATTTGAGTCCCAGCCTCGCTATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581143.1
CDS TCA 72 bp AAGATGAAGAAAAGGATGGCTTGGCAGTGTAAGGGCTaGACAGCAGGAAAGACCCAGCTAAGATCAGAATAT +
Preference number: 6 (lower is better)
Translates to: KMKKRMAWQCKG*TAGKTQLRSEY
Trigger: ATATTCTGATCTTAGCTGGGTCTTTCCTGCTGTTCAGCCCTTACACTGCCAAGCCATCCTTTTCTTCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS TCA 72 bp GTAAGAACTGATAAGAGTTTTGAGATACAGGCACCTTaGGATGAGCTCGATCACAGTGATGAAGGGCAGAAG +
Preference number: 6 (lower is better)
Translates to: VRTDKSFEIQAP*DELDHSDEGQK
Trigger: CTTCTGCCCTTCATCACTGTGATCGAGCTCATCTCAAGGTGCCTGTATCTCAAAACTCTTATCAGTTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS TCA 72 bp TTAGAAATGCAAATTCTTGACCCACTCCAGACCTACTaGGTAAGAAATTCTGGGGGCCCACCAATCTGCATT +
Preference number: 6 (lower is better)
Translates to: LEMQILDPLQTY*VRNSGGPPICI
Trigger: AATGCAGATTGGTGGGCCCCCAGAATTTCTTACTCAGTAGGTCTGGAGTGGGTCAAGAATTTGCATTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS CCA 72 bp ATTTTCATCCTGTACTTCCATGCTGTATTGGTCACCTaGCTGAACTTCTGTGACTTTCTCTCCAAGGAGGAA +
Preference number: 6 (lower is better)
Translates to: IFILYFHAVLVT*LNFCDFLSKEE
Trigger: TTCCTCCTTGGAGAGAAAGTCACAGAAGTTCAGCCAGGTGACCAATACAGCATGGAAGTACAGGATGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS CCA 72 bp TGCTTGGTGGAGAACATAGAAGGGCAAGTTGGAAGATaGGGCATAATGTTTTACCTGGAAGCCTGGAATTTT +
Preference number: 6 (lower is better)
Translates to: CLVENIEGQVGR*GIMFYLEAWNF
Trigger: AAAATTCCAGGCTTCCAGGTAAAACATTATGCCCCATCTTCCAACTTGCCCTTCTATGTTCTCCACCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS TCA 72 bp TCTACTCGATACAAACAGGAGTCCATGCTGGATTTTTaGGACTGCCAAGGTTTTATGTTTCCTCCAGATCCT +
Preference number: 6 (lower is better)
Translates to: STRYKQESMLDF*DCQGFMFPPDP
Trigger: AGGATCTGGAGGAAACATAAAACCTTGGCAGTCTCAAAAATCCAGCATGGACTCCTGTTTGTATCGAGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS TCA 72 bp TTTAGTTTGGCTGAATCAGTCTGCATTACAAAAGCCTaGGACAGAAGACTGCCAAATGTATGCCAGGGAAAA +
Preference number: 6 (lower is better)
Translates to: FSLAESVCITKA*DRRLPNVCQGK
Trigger: TTTTCCCTGGCATACATTTGGCAGTCTTCTGTCTCAGGCTTTTGTAATGCAGACTGATTCAGCCAAACTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS CCA 72 bp TGGTTTTCTGTTCCTGTGTTAATTCACTTAGGATACTaGCCTTCAGTTGCATCTATGTTGCTGCAAAGGACA +
Preference number: 6 (lower is better)
Translates to: WFSVPVLIHLGY*PSVASMLLQRT
Trigger: TGTCCTTTGCAGCAACATAGATGCAACTGAAGGCCAGTATCCTAAGTGAATTAACACAGGAACAGAAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581143.1
CDS CAA 72 bp AGCGATCACGAATTCACATTAATTTGGTTGGCAATTTaGTCTTCGTGCAATCTTTTCTCCTGGTTTCCTGGG +
Preference number: 6 (lower is better)
Translates to: SDHEFTLIWLAI*SSCNLFSWFPG
Trigger: CCCAGGAAACCAGGAGAAAAGATTGCACGAAGACAAAATTGCCAACCAAATTAATGTGAATTCGTGATCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581143.1
CDS CAA 72 bp TTCAGTTGCATCTATGTTGCTGCAAAGGACATGATTTaGTTCTTCTTACGGCTGTGTAGTATTCCACGGCAA +
Preference number: 6 (lower is better)
Translates to: FSCIYVAAKDMI*FFLRLCSIPRQ
Trigger: TTGCCGTGGAATACTACACAGCCGTAAGAAGAACAAAATCATGTCCTTTGCAGCAACATAGATGCAACTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581143.1
CDS CAA 72 bp TTTTATTGTAGATTCAAGGGCAGTGAATGTACAGGTTaGTTTCATGGTGTACTGGATGATGCCGAGGTTTGG +
Preference number: 6 (lower is better)
Translates to: FYCRFKGSECTG*FHGVLDDAEVW
Trigger: CCAAACCTCGGCATCATCCAGTACACCATGAAACAAACCTGTACATTCACTGCCCTTGAATCTACAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581143.1
CDS CAA 90 bp ATTCAGAGCAGCGATCACGAATTCACATTAATTTGGTTGGCAATTTaGTCTTCGTGCAATCTTTTCTCCTGGTTTCCTGGGTCCTTCAAT +
Preference number: 6 (lower is better)
Translates to: IQSSDHEFTLIWLAI*SSCNLFSWFPGSFN
Trigger: ATTGAAGGACCCAGGAAACCAGGAGAAAAGATTGCACGAAGACAAAATTGCCAACCAAATTAATGTGAATTCGTGATCGCTGCTCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581143.1
CDS CAA 90 bp TCCAGAGTAGCTTTCCCTACACTTTTGGACTTAACCATCAGTGAATaGGTTTGGTTTGATCCACAATTTCCTTTTACATGCAGGACAACA +
Preference number: 6 (lower is better)
Translates to: SRVAFPTLLDLTISE*VWFDPQFPFTCRTT
Trigger: TGTTGTCCTGCATGTAAAAGGAAATTGTGGATCAAACCAAACCAATTCACTGATGGTTAAGTCCAAAAGTGTAGGGAAAGCTACTCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS CAA 90 bp ATTCCAGCTCAACAGCTATACTCCAGAGTAGCTTTCCCTACACTTTaGGACTTAACCATCAGTGAATTGGTTTGGTTTGATCCACAATTT +
Preference number: 6 (lower is better)
Translates to: IPAQQLYSRVAFPTL*DLTISELVWFDPQF
Trigger: AAATTGTGGATCAAACCAAACCAATTCACTGATGGTTAAGTCCAAAAGTGTAGGGAAAGCTACTCTGGAGTATAGCTGTTGAGCTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS TCA 72 bp TTACTCAAACCCTTAAAAATGTGTGCTTTGAGGATGTaGTGTCCCAGTTCAATAGTCTGCTGTCGGTTTAGT +
Preference number: 6 (lower is better)
Translates to: LLKPLKMCALRM*CPSSIVCCRFS
Trigger: ACTAAACCGACAGCAGACTATTGAACTGGGACATCACATCCTCAAAGCACACATTTTTAAGGGTTTGAGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
ENST00000583545.1
CDS TCA 72 bp TCTCCATCATGGTTTGATATACTCTACCCAGACTCATaGAGTAACACTGGAGATAAGAAAGAGTATGCATCG +
Preference number: 6 (lower is better)
Translates to: SPSWFDILYPDS*SNTGDKKEYAS
Trigger: CGATGCATACTCTTTCTTATCTCCAGTGTTACTTCATGAGTCTGGGTAGAGTATATCAAACCATGATGGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS TCA 72 bp TGCTGTGACAGGAGACTGTGGAATGGAAAAGTTAAGTaGCATGTTCCAGACCATAAGATTCATCAGAGAAAA +
Preference number: 6 (lower is better)
Translates to: CCDRRLWNGKVK*HVPDHKIHQRK
Trigger: TTTTCTCTGATGAATCTTATGGTCTGGAACATGTCACTTAACTTTTCCATTCCACAGTCTCCTGTCACAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS GCA 72 bp TCCTGTGTTAATTCACTTAGGATACTGGCCTTCAGTTaGATCTATGTTGCTGCAAAGGACATGATTTTGTTC +
Preference number: 6 (lower is better)
Translates to: SCVNSLRILAFS*IYVAAKDMILF
Trigger: GAACAAAATCATGTCCTTTGCAGCAACATAGATGCAACTGAAGGCCAGTATCCTAAGTGAATTAACACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581143.1
CDS GCA 72 bp TTGTGTCTGATCCTAAAGCTTATCATTTTAATGAGTTaGCTCCTCTCTCATTCATGGAAGCCAGAATGCAAG +
Preference number: 6 (lower is better)
Translates to: LCLILKLIILMS*LLSHSWKPECK
Trigger: CTTGCATTCTGGCTTCCATGAATGAGAGAGGAGGCAACTCATTAAAATGATAAGCTTTAGGATCAGACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS CCA 72 bp AGGATTGAAAGAGGAAAACTGCTTGACTGTTTAGTTTaGCTGAATCAGTCTGCATTACAAAAGCCTGAGACA +
Preference number: 6 (lower is better)
Translates to: RIERGKLLDCLV*LNQSALQKPET
Trigger: TGTCTCAGGCTTTTGTAATGCAGACTGATTCAGCCAAACTAAACAGTCAAGCAGTTTTCCTCTTTCAATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583016.1
CDS CAA 72 bp ATTCAGAGCAGCGATCACGAATTCACATTAATTTGGTaGGCAATTTTGTCTTCGTGCAATCTTTTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: IQSSDHEFTLIW*AILSSCNLFSW
Trigger: CCAGGAGAAAAGATTGCACGAAGACAAAATTGCCAACCAAATTAATGTGAATTCGTGATCGCTGCTCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581143.1
CDS CAA 72 bp CAACAGCTATACTCCAGAGTAGCTTTCCCTACACTTTaGGACTTAACCATCAGTGAATTGGTTTGGTTTGAT +
Preference number: 6 (lower is better)
Translates to: QQLYSRVAFPTL*DLTISELVWFD
Trigger: ATCAAACCAAACCAATTCACTGATGGTTAAGTCCAAAAGTGTAGGGAAAGCTACTCTGGAGTATAGCTGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS CAA 90 bp GCTCATGGAATTTACACAGTGACAGGATTAGAGGGCAATATATTTTaGGACTATATTGTGTCCACTTCAAGAGCTGAACAACAAATCCTG +
Preference number: 6 (lower is better)
Translates to: AHGIYTVTGLEGNIF*DYIVSTSRAEQQIL
Trigger: CAGGATTTGTTGTTCAGCTCTTGAAGTGGACACAATATAGTCCAAAAATATATTGCCCTCTAATCCTGTCACTGTGTAAATTCCATGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS TCA 72 bp TCCATAGGTACTCAATGTTTAGCTCCCACTTATCAATaGGAACATGTGGTATTTGGTTTTCTGTTCCTGTGT +
Preference number: 6 (lower is better)
Translates to: SIGTQCLAPTYQ*EHVVFGFLFLC
Trigger: ACACAGGAACAGAAAACCAAATACCACATGTTCTCATTGATAAGTGGGAGCTAAACATTGAGTACCTATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581143.1
CDS TCA 72 bp AGTTTCTGCATGTTCTTCAAAGTCCTCATCCATTACTaGCCCACAAGAGATTCTACGTTATTCCTAAAAGAC +
Preference number: 6 (lower is better)
Translates to: SFCMFFKVLIHY*PTRDSTLFLKD
Trigger: GTCTTTTAGGAATAACGTAGAATCTCTTGTGGGTCAGTAATGGATGAGGACTTTGAAGAACATGCAGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS CCA 72 bp CCAAATTTCTCTCTGGGATCTTATTCAGACTATAGGTaGAAGCAGTCATGTTTTCATCTACTCGATACAAAC +
Preference number: 6 (lower is better)
Translates to: PNFSLGSYSDYR*KQSCFHLLDTN
Trigger: GTTTGTATCGAGTAGATGAAAACATGACTGCTTCCACCTATAGTCTGAATAAGATCCCAGAGAGAAATTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS CCA 72 bp CCTACACTTTTGGACTTAACCATCAGTGAATTGGTTTaGTTTGATCCACAATTTCCTTTTACATGCAGGACA +
Preference number: 6 (lower is better)
Translates to: PTLLDLTISELV*FDPQFPFTCRT
Trigger: TGTCCTGCATGTAAAAGGAAATTGTGGATCAAACCAAACCAATTCACTGATGGTTAAGTCCAAAAGTGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS CAA 72 bp GCTTTCCCTACACTTTTGGACTTAACCATCAGTGAATaGGTTTGGTTTGATCCACAATTTCCTTTTACATGC +
Preference number: 6 (lower is better)
Translates to: AFPTLLDLTISE*VWFDPQFPFTC
Trigger: GCATGTAAAAGGAAATTGTGGATCAAACCAAACCAATTCACTGATGGTTAAGTCCAAAAGTGTAGGGAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS CAA 90 bp TATTTCAAATTTTATTGTAGATTCAAGGGCAGTGAATGTACAGGTTaGTTTCATGGTGTACTGGATGATGCCGAGGTTTGGGACACAAAA +
Preference number: 6 (lower is better)
Translates to: YFKFYCRFKGSECTG*FHGVLDDAEVWDTK
Trigger: TTTTGTGTCCCAAACCTCGGCATCATCCAGTACACCATGAAACAAACCTGTACATTCACTGCCCTTGAATCTACAATAAAATTTGAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581143.1
CDS TCA 72 bp TACTATGTCCTATCTGGCTTCGAAGGTATATTATACTaGCATTTCAGATCACAGATACTGATATCTTCCCCA +
Preference number: 6 (lower is better)
Translates to: YYVLSGFEGILY*HFRSQILISSP
Trigger: TGGGGAAGATATCAGTATCTGTGATCTGAAATGTCAGTATAATATACCTTCGAAGCCAGATAGGACATAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS TCA 72 bp TATATTTTTGGACTATATTGTGTCCACTTCAAGAGCTaGACAACAAATCCTGCTTGTGACCCTAGACAAATC +
Preference number: 6 (lower is better)
Translates to: YIFGLYCVHFKS*TTNPACDPRQI
Trigger: GATTTGTCTAGGGTCACAAGCAGGATTTGTTGTTCAGCTCTTGAAGTGGACACAATATAGTCCAAAAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS CCA 72 bp CTTATCATTTTAATGAGTTGCCTCCTCTCTCATTCATaGAAGCCAGAATGCAAGTGGTTAAGGAGTAATAAA +
Preference number: 6 (lower is better)
Translates to: LIILMSCLLSHS*KPECKWLRSNK
Trigger: TTTATTACTCCTTAACCACTTGCATTCTGGCTTCCATGAATGAGAGAGGAGGCAACTCATTAAAATGATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS CCA 72 bp TCTGCTTTTAAATCTAAGGACAGTAAGGAATGCTCATaGAATTTACACAGTGACAGGATTAGAGGGCAATAT +
Preference number: 6 (lower is better)
Translates to: SAFKSKDSKECS*NLHSDRIRGQY
Trigger: ATATTGCCCTCTAATCCTGTCACTGTGTAAATTCCATGAGCATTCCTTACTGTCCTTAGATTTAAAAGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS CAA 72 bp CAGATCCTAATTCTTTACTGCTTTCCCCAGCATATTTaGTGCGTTCCACATTTTCAGAATAGCTTGTTAATG +
Preference number: 6 (lower is better)
Translates to: QILILYCFPQHI*CVPHFQNSLLM
Trigger: CATTAACAAGCTATTCTGAAAATGTGGAACGCACAAAATATGCTGGGGAAAGCAGTAAAGAATTAGGATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS CAA 72 bp AGCACTGAATACCGCAGAATGAAGTCATACTATGACTaGTATTTCACTATGAAACCACTAAAGTCCTCAGTT +
Preference number: 6 (lower is better)
Translates to: STEYRRMKSYYD*YFTMKPLKSSV
Trigger: AACTGAGGACTTTAGTGGTTTCATAGTGAAATACAAGTCATAGTATGACTTCATTCTGCGGTATTCAGTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS CAA 72 bp GTCAAACACAGCAGGGACAATCACAGATATGATAAGTaGAACAATAGTCATAATATTGCTTGGTGGAGAACA +
Preference number: 6 (lower is better)
Translates to: VKHSRDNHRYDK*NNSHNIAWWRT
Trigger: TGTTCTCCACCAAGCAATATTATGACTATTGTTCAACTTATCATATCTGTGATTGTCCCTGCTGTGTTTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS GCA 72 bp AATTTGCATGAAGAAATGCAAAGTACAATATTCGACTaGCCAAGAAGCGTGACAATACCTCAAAACATGAAA +
Preference number: 6 (lower is better)
Translates to: NLHEEMQSTIFD*PRSVTIPQNMK
Trigger: TTTCATGTTTTGAGGTATTGTCACGCTTCTTGGGCAGTCGAATATTGTACTTTGCATTTCTTCATGCAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581424.1
CDS CAA 72 bp GAAACTTTCCGATCATTTTACTCAGAAACGATACAATaGTATCCCCATAATCCGGTTTGTGAAATTCTGCTT +
Preference number: 6 (lower is better)
Translates to: ETFRSFYSETIQ*YPHNPVCEILL
Trigger: AAGCAGAATTTCACAAACCGGATTATGGGGATACAATTGTATCGTTTCTGAGTAAAATGATCGGAAAGTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389520.8
ENST00000424789.6
ENST00000583356.5
CDS CAA 72 bp TATTATTCAGAGCAGCGATCACGAATTCACATTAATTaGGTTGGCAATTTTGTCTTCGTGCAATCTTTTCTC +
Preference number: 6 (lower is better)
Translates to: YYSEQRSRIHIN*VGNFVFVQSFL
Trigger: GAGAAAAGATTGCACGAAGACAAAATTGCCAACCAAATTAATGTGAATTCGTGATCGCTGCTCTGAATAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581143.1
CDS CAA 72 bp CTTGTATTTCACTATGAAACCACTAAAGTCCTCAGTTaGTTTTCAGGACTGAAACAAAATACTATGAGGCCA +
Preference number: 6 (lower is better)
Translates to: LVFHYETTKVLS*FSGLKQNTMRP
Trigger: TGGCCTCATAGTATTTTGTTTCAGTCCTGAAAACAAACTGAGGACTTTAGTGGTTTCATAGTGAAATACAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583545.1
CDS TCA 72 bp CCTTTCTATACCTATAATTTGAGGGACTTTGGCATTTaGGTAAAGTGCTTCATGGAGTTTAATCTCCTTATT +
Preference number: 6 (lower is better)
Translates to: PFYTYNLRDFGI*VKCFMEFNLLI
Trigger: AATAAGGAGATTAAACTCCATGAAGCACTTTACTCAAATGCCAAAGTCCCTCAAATTATAGGTATAGAAAGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581143.1
CDS TCA 72 bp CACAATTCTCCAGCAAAGAGAGTTATTTTAGATCTATaGAGCTCGATGTATACCAACTTCTTTATTTTCCCT +
Preference number: 6 (lower is better)
Translates to: HNSPAKRVILDL*SSMYTNFFIFP
Trigger: AGGGAAAATAAAGAAGTTGGTATACATCGAGCTTCATAGATCTAAAATAACTCTCTTTGCTGGAGAATTGTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581424.1