RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TAF8 (Homo sapiens)

Ensembl gene IDs: ENSG00000137413

Ensembl transcript IDs: ENST00000372977.8, ENST00000372978.7, ENST00000372982.8, ENST00000456846.6, ENST00000465926.5, ENST00000472818.5, ENST00000482432.1, ENST00000482926.1, ENST00000486070.1, ENST00000494547.5

Found 574 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGCCCTGCACTTCTTGAGGACAGGGTCTACATCCTCTGGGTTGGCTaGATGACCTTCCCGATGGCTGCGCCTGGCCCGTCACCTGGGCGA +
Preference number: 1 (lower is better)
Translates to: RPALLEDRVYILWVG*MTFPMAAPGPSPGR
Trigger: TCGCCCAGGTGACGGGCCAGGCGCAGCCATCGGGAAGGTCATTCAGCCAACCCAGAGGATGTAGACCCTGTCCTCAAGAAGTGCAGGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR CCA 90 bp GGAGCTGGCTATATGGCCAGGCCCTGTGAGGAGAAGCAGGGTTCCTaGGCACCTCCAAGAGCTCAGGAGGGATGCAGGCCTCCTCCAGAC +
Preference number: 1 (lower is better)
Translates to: GAGYMARPCEEKQGS*APPRAQEGCRPPPD
Trigger: GTCTGGAGGAGGCCTGCATCCCTCCTGAGCTCTTGGAGGTGCCCAGGAACCCTGCTTCTCCTCACAGGGCCTGGCCATATAGCCAGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372982.8
3UTR TCA 90 bp AATGACCTTCCCGATGGCTGCGCCTGGCCCGTCACCTGGGCGATCTaGCAAGCTTGTGGGGTAGCATCTGCACCAGCAAGGGCTGGAAGG +
Preference number: 1 (lower is better)
Translates to: NDLPDGCAWPVTWAI*QACGVASAPARAGR
Trigger: CCTTCCAGCCCTTGCTGGTGCAGATGCTACCCCACAAGCTTGTCAGATCGCCCAGGTGACGGGCCAGGCGCAGCCATCGGGAAGGTCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR GCA 90 bp TCCAGGAGCGCCAGGGTCCATGGTAAAGCTCTACCCTGGGCCAGCTaGCCCCGCACTTGCACCTGGGCACAGGAAGTTGATGTTCGCAGA +
Preference number: 1 (lower is better)
Translates to: SRSARVHGKALPWAS*PRTCTWAQEVDVRR
Trigger: TCTGCGAACATCAACTTCCTGTGCCCAGGTGCAAGTGCGGGGGCAGCTGGCCCAGGGTAGAGCTTTACCATGGACCCTGGCGCTCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR TCA 90 bp CTGCAGCCTCGGCTTGGCCATGAGGAGGTCACCCTCTTCTTCCCTTaGGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTA +
Preference number: 1 (lower is better)
Translates to: LQPRLGHEEVTLFFP*VALTPREGGICAPV
Trigger: TACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAAGGGAAGAAGAGGGTGACCTCCTCATGGCCAAGCCGAGGCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR TCA 90 bp CTGCACTTCTTGAGGACAGGGTCTACATCCTCTGGGTTGGCTGAATaGCCTTCCCGATGGCTGCGCCTGGCCCGTCACCTGGGCGATCTG +
Preference number: 1 (lower is better)
Translates to: LHFLRTGSTSSGLAE*PSRWLRLARHLGDL
Trigger: CAGATCGCCCAGGTGACGGGCCAGGCGCAGCCATCGGGAAGGTCATTCAGCCAACCCAGAGGATGTAGACCCTGTCCTCAAGAAGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR TCA 90 bp CGAGGCCACAAGACATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTaGGAGGAGGGAGAGTATTTCAGAGGGCACGGCAGAACTCGCCCT +
Preference number: 1 (lower is better)
Translates to: RGHKTWCTQALEGGL*EEGEYFRGHGRTRP
Trigger: AGGGCGAGTTCTGCCGTGCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATGTCTTGTGGCCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR GCA 90 bp CTGGCCCGTCACCTGGGCGATCTGACAAGCTTGTGGGGTAGCATCTaGACCAGCAAGGGCTGGAAGGAGCACAGAGCCTGGGTTTGCTTC +
Preference number: 1 (lower is better)
Translates to: LARHLGDLTSLWGSI*TSKGWKEHRAWVCF
Trigger: GAAGCAAACCCAGGCTCTGTGCTCCTTCCAGCCCTTGCTGGTGCAGATGCTACCCCACAAGCTTGTCAGATCGCCCAGGTGACGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR GCA 90 bp GAGGAGAAGCAGGGTTCCTGGGCACCTCCAAGAGCTCAGGAGGGATaGAGGCCTCCTCCAGACAAGCTGAGGACACACTCCCTGACCAGA +
Preference number: 1 (lower is better)
Translates to: EEKQGSWAPPRAQEG*RPPPDKLRTHSLTR
Trigger: TCTGGTCAGGGAGTGTGTCCTCAGCTTGTCTGGAGGAGGCCTGCATCCCTCCTGAGCTCTTGGAGGTGCCCAGGAACCCTGCTTCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372982.8
3UTR GCA 90 bp TCTCAGGAGGAGAGTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATaGCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTTC +
Preference number: 1 (lower is better)
Translates to: SQEESAAPLQGAFVK*RREDRCSPDMSFFF
Trigger: GAAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCACTCTCCTCCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR GCA 90 bp GCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGGACAGGTaGAGCCCCGACATGTCGTTCTTCTTCACAGTGATGCATCTGCTC +
Preference number: 1 (lower is better)
Translates to: APLQGAFVKCRREDR*SPDMSFFFTVMHLL
Trigger: GAGCAGATGCATCACTGTGAAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR TCA 90 bp GAGGACACACTCCCTGACCAGACCCCAGAGTTCCAGAGCATTCTGTaGAGCCAGAGGAAGGCTTCAGGCGAGGCCACAAGACATGGTGCA +
Preference number: 1 (lower is better)
Translates to: EDTLPDQTPEFQSIL*SQRKASGEATRHGA
Trigger: TGCACCATGTCTTGTGGCCTCGCCTGAAGCCTTCCTCTGGCTTCACAGAATGCTCTGGAACTCTGGGGTCTGGTCAGGGAGTGTGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372982.8
3UTR GCA 90 bp GACTCAGACCTGCTTCTTGCAGAACGCCTCAGCTTGGCTCACTCCTaGCCATCCACCAGCCTTCCAGCTGACCAGCCGTTTCTCAGCTTT +
Preference number: 1 (lower is better)
Translates to: DSDLLLAERLSLAHS*PSTSLPADQPFLSF
Trigger: AAAGCTGAGAAACGGCTGGTCAGCTGGAAGGCTGGTGGATGGGCAGGAGTGAGCCAAGCTGAGGCGTTCTGCAAGAAGCAGGTCTGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR CCA 90 bp GGTCACCCTCTTCTTCCCTTGAGTGGCTTTAACTCCCCGGGAGGGTaGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGCTCAG +
Preference number: 1 (lower is better)
Translates to: GHPLLPLSGFNSPGG*NLRPCTSQVSFSAQ
Trigger: CTGAGCTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAAGGGAAGAAGAGGGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494547.5
3UTR TCA 90 bp GACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTTCACAGTaGTGCATCTGCTCAAGACTCCTGACTCCTGCCCACCCCAAACAA +
Preference number: 1 (lower is better)
Translates to: DGRTGAAPTCRSSSQ*CICSRLLTPAHPKQ
Trigger: TTGTTTGGGGTGGGCAGGAGTCAGGAGTCTTGAGCAGATGCATCACTGTGAAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR TCA 90 bp ATGTGGTGGCGGGCATCTGTAATCCCAGCTACTCTGAGAATTGCTTaGACCCGGGGAGTGGAGGTTGCAGTGAGCCGAGGTAGTGCCACT +
Preference number: 1 (lower is better)
Translates to: MWWRASVIPATLRIA*TRGVEVAVSRGSAT
Trigger: AGTGGCACTACCTCGGCTCACTGCAACCTCCACTCCCCGGGTTCAAGCAATTCTCAGAGTAGCTGGGATTACAGATGCCCGCCACCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR TCA 90 bp GGGAGAGTATTTCAGAGGGCACGGCAGAACTCGCCCTGCACTTCTTaGGGACAGGGTCTACATCCTCTGGGTTGGCTGAATGACCTTCCC +
Preference number: 1 (lower is better)
Translates to: GRVFQRARQNSPCTS*GQGLHPLGWLNDLP
Trigger: GGGAAGGTCATTCAGCCAACCCAGAGGATGTAGACCCTGTCCTCAAGAAGTGCAGGGCGAGTTCTGCCGTGCCCTCTGAAATACTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR GCA 90 bp TCCCCACAGGATACAAATTGGTTGGACAGACTCAGACCTGCTTCTTaGAGAACGCCTCAGCTTGGCTCACTCCTGCCCATCCACCAGCCT +
Preference number: 1 (lower is better)
Translates to: SPQDTNWLDRLRPAS*RTPQLGSLLPIHQP
Trigger: AGGCTGGTGGATGGGCAGGAGTGAGCCAAGCTGAGGCGTTCTGCAAGAAGCAGGTCTGAGTCTGTCCAACCAATTTGTATCCTGTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR GCA 90 bp GAGCCTGGGTTTGCTTCCGTGTGTGTCTTTCTTGACCTTTGTGGCTaGTCTCCTGGTGACCGATCTCCTTGGGGAGCACTTGGCAGCTTA +
Preference number: 1 (lower is better)
Translates to: EPGFASVCVFLDLCG*SPGDRSPWGALGSL
Trigger: TAAGCTGCCAAGTGCTCCCCAAGGAGATCGGTCACCAGGAGAGCAGCCACAAAGGTCAAGAAAGACACACACGGAAGCAAACCCAGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR GCA 90 bp CATCTGCTCAAGACTCCTGACTCCTGCCCACCCCAAACAAAGCTGTaGTGTGTGGCCTCCTGTTTCCGACACGTTGAGGGAGTACAAAGA +
Preference number: 1 (lower is better)
Translates to: HLLKTPDSCPPQTKL*CVASCFRHVEGVQR
Trigger: TCTTTGTACTCCCTCAACGTGTCGGAAACAGGAGGCCACACAGCACAGCTTTGTTTGGGGTGGGCAGGAGTCAGGAGTCTTGAGCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR GCA 90 bp AGGGTCCATGGTAAAGCTCTACCCTGGGCCAGCTGCCCCCGCACTTaGACCTGGGCACAGGAAGTTGATGTTCGCAGAATTAAGAACTTT +
Preference number: 1 (lower is better)
Translates to: RVHGKALPWASCPRT*TWAQEVDVRRIKNF
Trigger: AAAGTTCTTAATTCTGCGAACATCAACTTCCTGTGCCCAGGTGCAAGTGCGGGGGCAGCTGGCCCAGGGTAGAGCTTTACCATGGACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR GCA 90 bp TCGTTCTTCTTCACAGTGATGCATCTGCTCAAGACTCCTGACTCCTaGCCACCCCAAACAAAGCTGTGCTGTGTGGCCTCCTGTTTCCGA +
Preference number: 1 (lower is better)
Translates to: SFFFTVMHLLKTPDS*PPQTKLCCVASCFR
Trigger: TCGGAAACAGGAGGCCACACAGCACAGCTTTGTTTGGGGTGGGCAGGAGTCAGGAGTCTTGAGCAGATGCATCACTGTGAAGAAGAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR GCA 90 bp GTTGTTCTCCCCACAGGATACAAATTGGTTGGACAGACTCAGACCTaGTTCTTGCAGAACGCCTCAGCTTGGCTCACTCCTGCCCATCCA +
Preference number: 1 (lower is better)
Translates to: VVLPTGYKLVGQTQT*FLQNASAWLTPAHP
Trigger: TGGATGGGCAGGAGTGAGCCAAGCTGAGGCGTTCTGCAAGAAGCAGGTCTGAGTCTGTCCAACCAATTTGTATCCTGTGGGGAGAACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR CCA 90 bp TCAAGACTCCTGACTCCTGCCCACCCCAAACAAAGCTGTGCTGTGTaGCCTCCTGTTTCCGACACGTTGAGGGAGTACAAAGAACTTTTC +
Preference number: 1 (lower is better)
Translates to: SRLLTPAHPKQSCAV*PPVSDTLREYKELF
Trigger: GAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAAACAGGAGGCCACACAGCACAGCTTTGTTTGGGGTGGGCAGGAGTCAGGAGTCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR TCA 90 bp CCCTCTTCCGTTCCTGACAAGCAGCTCTTTCCTTACACAGTACAGTaGGGCCAGAAGAACATGGAGCCTGCTGTCAAGTCCCCAAGTTTT +
Preference number: 1 (lower is better)
Translates to: PSSVPDKQLFPYTVQ*GQKNMEPAVKSPSF
Trigger: AAAACTTGGGGACTTGACAGCAGGCTCCATGTTCTTCTGGCCTCACTGTACTGTGTAAGGAAAGAGCTGCTTGTCAGGAACGGAAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR TCA 90 bp AGTAGTGGCTGCCAGGAGAGAAGTGGAAGAGCAGAGAGGTGGATGTaGTTGCAAAGAGACAGCATGAGGGAGAACTGTACTGATGCAATG +
Preference number: 1 (lower is better)
Translates to: SSGCQERSGRAERWM*LQRDSMRENCTDAM
Trigger: CATTGCATCAGTACAGTTCTCCCTCATGCTGTCTCTTTGCAATCACATCCACCTCTCTGCTCTTCCACTTCTCTCCTGGCAGCCACTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR TCA 90 bp GTGTCTTCACCATTTGTGTGCTGGTGGTTACACAAATCTACACGATaGAACTGCACGGAACAACACACACATAACACACACGTGCACATG +
Preference number: 1 (lower is better)
Translates to: VSSPFVCWWLHKSTR*NCTEQHTHNTHVHM
Trigger: CATGTGCACGTGTGTGTTATGTGTGTGTTGTTCCGTGCAGTTTCATCGTGTAGATTTGTGTAACCACCAGCACACAAATGGTGAAGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR GCA 90 bp AAACTGAATGCAAGGGTTTTGATATTGCACCACAGTTATGCAAGATaGTACCACTGGGAGAAAGTGGGTGATGGGTACATAGGATCTCTC +
Preference number: 1 (lower is better)
Translates to: KLNARVLILHHSYAR*YHWEKVGDGYIGSL
Trigger: GAGAGATCCTATGTACCCATCACCCACTTTCTCCCAGTGGTAGCATCTTGCATAACTGTGGTGCAATATCAAAACCCTTGCATTCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR CCA 90 bp GCAAGGGTTTTGATATTGCACCACAGTTATGCAAGATGCTACCACTaGGAGAAAGTGGGTGATGGGTACATAGGATCTCTCTCAACATTT +
Preference number: 1 (lower is better)
Translates to: ARVLILHHSYARCYH*EKVGDGYIGSLSTF
Trigger: AAATGTTGAGAGAGATCCTATGTACCCATCACCCACTTTCTCCCAGTGGTAGCATCTTGCATAACTGTGGTGCAATATCAAAACCCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR CCA 90 bp AAAGGGGAATACATGAAGCTAAATATGGACGTTAGGATTCTAATTTaGGAAACAAGCTTATTCATCCAGTGTTCACTTCCACGTGTTGTT +
Preference number: 1 (lower is better)
Translates to: KGEYMKLNMDVRILI*ETSLFIQCSLPRVV
Trigger: AACAACACGTGGAAGTGAACACTGGATGAATAAGCTTGTTTCCCAAATTAGAATCCTAACGTCCATATTTAGCTTCATGTATTCCCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR GCA 90 bp ATGCATTGTACTAATATACCATCTACATTGTACACTGAAACTGAATaGAAGGGTTTTGATATTGCACCACAGTTATGCAAGATGCTACCA +
Preference number: 1 (lower is better)
Translates to: MHCTNIPSTLYTETE*KGFDIAPQLCKMLP
Trigger: TGGTAGCATCTTGCATAACTGTGGTGCAATATCAAAACCCTTGCATTCAGTTTCAGTGTACAATGTAGATGGTATATTAGTACAATGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR-3UTR CCA 90 bp GGAGAAGCAGGGTTCCTGGGCACCTCCAAGAGCTCAGGAGGGATGCAGGCCTCCCCCGATGGCTGCGCCTaGCCCGTCACCTGGGCGATC +
Preference number: 2 (lower is better)
Translates to: GEAGFLGTSKSSGGMQASPDGCA*PVTWAI
Trigger: GATCGCCCAGGTGACGGGCCAGGCGCAGCCATCGGG...GGAGGCCTGCATCCCTCCTGAGCTCTTGGAGGTGCCCAGGAACCCTGCTTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372982.8
3UTR-3UTR GCA 90 bp GCCACAAGACATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGGACCTTCCCGATGGCTaGGCCTGGCCCGTCACCTGG +
Preference number: 2 (lower is better)
Translates to: ATRHGALRLSREGSERREDLPDG*AWPVTW
Trigger: CCAGGTGACGGGCCAGGCGCAGCCATCGGGAAGGTC...CTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATGTCTTGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR-3UTR CCA 90 bp CGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCACGGCAGAACTCGCCCGATGGCTGCGCCTaGCCCGTCACCTGGGCGATC +
Preference number: 2 (lower is better)
Translates to: RGRALRGGRVFQRARQNSPDGCA*PVTWAI
Trigger: GATCGCCCAGGTGACGGGCCAGGCGCAGCCATCGGG...CGAGTTCTGCCGTGCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR-3UTR TCA 90 bp GCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCTGGCTGCTCTCCTGGTaGCCGATCTCCTTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: ALRLSREGSERRESISEGWLLSW*PISLGS
Trigger: GCTCCCCAAGGAGATCGGTCACCAGGAGAGCAGCCA...GCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR-3UTR TCA 90 bp GCCACAAGACATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGTCTGGGTTGGCTGAATaGCCTTCCCGATGGCTGCGC +
Preference number: 2 (lower is better)
Translates to: ATRHGALRLSREGSERRESGLAE*PSRWLR
Trigger: GCGCAGCCATCGGGAAGGTCATTCAGCCAACCCAGA...CTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATGTCTTGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR-3UTR TCA 90 bp CACTGTGCAGGGCTTTGGGTTGGAGCTGGCTATATGGCCAGGCCCTGTGAGGAGTCTGGGTTGGCTGAATaGCCTTCCCGATGGCTGCGC +
Preference number: 2 (lower is better)
Translates to: HCAGLWVGAGYMARPCEESGLAE*PSRWLR
Trigger: GCGCAGCCATCGGGAAGGTCATTCAGCCAACCCAGA...CTCCTCACAGGGCCTGGCCATATAGCCAGCTCCAACCCAAAGCCCTGCACAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372982.8
3UTR-3UTR GCA 90 bp CTGACCAGACCCCAGAGTTCCAGAGCATTCTGTGAAGCCAGAGGAAGGCTTCAGGACCTTCCCGATGGCTaGGCCTGGCCCGTCACCTGG +
Preference number: 2 (lower is better)
Translates to: LTRPQSSRAFCEARGRLQDLPDG*AWPVTW
Trigger: CCAGGTGACGGGCCAGGCGCAGCCATCGGGAAGGTC...CTGAAGCCTTCCTCTGGCTTCACAGAATGCTCTGGAACTCTGGGGTCTGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372982.8
3UTR-3UTR GCA 90 bp ATCTCTCAGGAGGAGAGTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGGGTGGAATCTaGGCCCCTGTACAAGCCAGG +
Preference number: 2 (lower is better)
Translates to: ISQEESAAPLQGAFVKCRREGGI*APVQAR
Trigger: CCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCG...TCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCACTCTCCTCCTGAGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR GCA 90 bp GCCACTGCGCGTAGCCCCTCTTTCCTACTGTTTAAACCCCATGGCTCCTCTGTCCGGGAGGGTGGAATCTaGGCCCCTGTACAAGCCAGG +
Preference number: 2 (lower is better)
Translates to: ATARSPSFLLFKPHGSSVREGGI*APVQAR
Trigger: CCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCG...GACAGAGGAGCCATGGGGTTTAAACAGTAGGAAAGAGGGGCTACGCGCAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR TCA 90 bp AGAGTTCCAGAGCATTCTGTGAAGCCAGAGGAAGGCTTCAGGCGAGGCCACAAGTGGCTGCTCTCCTGGTaGCCGATCTCCTTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: RVPEHSVKPEEGFRRGHKWLLSW*PISLGS
Trigger: GCTCCCCAAGGAGATCGGTCACCAGGAGAGCAGCCA...CTTGTGGCCTCGCCTGAAGCCTTCCTCTGGCTTCACAGAATGCTCTGGAACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372982.8
3UTR-3UTR TCA 90 bp GCCACAAGACATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGCGTGTGTGTCTTTCTTaGCCTTTGTGGCTGCTCTCC +
Preference number: 2 (lower is better)
Translates to: ATRHGALRLSREGSERRERVCLS*PLWLLS
Trigger: GGAGAGCAGCCACAAAGGTCAAGAAAGACACACACG...CTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATGTCTTGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR-3UTR TCA 90 bp GGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGTCACCTGGGCGATCTaGCAAGCTTGTGGGGTAGCA +
Preference number: 2 (lower is better)
Translates to: GALRLSREGSERRESISEVTWAI*QACGVA
Trigger: TGCTACCCCACAAGCTTGTCAGATCGCCCAGGTGAC...CTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR-3UTR GCA 90 bp CGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAGCCCCGACACCCCAAACAAAGCTGTaGTGTGTGGCCTCCTGTTTC +
Preference number: 2 (lower is better)
Translates to: RFRELSSNADGRTGAAPTPQTKL*CVASCF
Trigger: GAAACAGGAGGCCACACAGCACAGCTTTGTTTGGGG...TGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR CCA 90 bp CAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTTCACAGTAACTCCCCGGGAGGGTaGAATCTGCGCCCCTGTACA +
Preference number: 2 (lower is better)
Translates to: QMPTGGQVQPRHVVLLHSNSPGG*NLRPCT
Trigger: TGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTT...ACTGTGAAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR CCA 90 bp ATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGTGCACCAGCAAGGGCTaGAAGGAGCACAGAGCCTGG +
Preference number: 2 (lower is better)
Translates to: MVHSGSRGRALRGGRVFQCTSKG*KEHRAW
Trigger: CCAGGCTCTGTGCTCCTTCCAGCCCTTGCTGGTGCA...CTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR-3UTR TCA 90 bp GCCACTGCGCGTAGCCCCTCTTTCCTACTGTTTAAACCCCATGGCTCCTCTGTCTCTGCTCAAGACTCCTaGCTCCTGCCCACCCCAAAC +
Preference number: 2 (lower is better)
Translates to: ATARSPSFLLFKPHGSSVSAQDS*LLPTPN
Trigger: GTTTGGGGTGGGCAGGAGTCAGGAGTCTTGAGCAGA...GACAGAGGAGCCATGGGGTTTAAACAGTAGGAAAGAGGGGCTACGCGCAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR TCA 90 bp AGACATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTGTCACCTGGGCGATCTaGCAAGCTTGTGGGGTAGCA +
Preference number: 2 (lower is better)
Translates to: RHGALRLSREGSERRESIVTWAI*QACGVA
Trigger: TGCTACCCCACAAGCTTGTCAGATCGCCCAGGTGAC...AATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR-3UTR GCA 90 bp GGCACTGTGCAGGGCTTTGGGTTGGAGCTGGCTATATGGCCAGGCCCTGTGAGGCACAGAGCCTGGGTTTaGTTCCGTGTGTGTCTTTCT +
Preference number: 2 (lower is better)
Translates to: GTVQGFGLELAIWPGPVRHRAWV*FRVCLS
Trigger: AGAAAGACACACACGGAAGCAAACCCAGGCTCTGTG...CCTCACAGGGCCTGGCCATATAGCCAGCTCCAACCCAAAGCCCTGCACAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372982.8
3UTR-3UTR CCA 90 bp GGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCACGGCAGAACTCGCCCTGCACGATCTGACAAGCTTGTaGGGTAGCATCTGCACCAGC +
Preference number: 2 (lower is better)
Translates to: GSERRESISEGTAELALHDLTSL*GSICTS
Trigger: GCTGGTGCAGATGCTACCCCACAAGCTTGTCAGATC...GTGCAGGGCGAGTTCTGCCGTGCCCTCTGAAATACTCTCCCTCCTCTCAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR-3UTR TCA 90 bp CAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTTCACAGTACCCTCTTCTTCCCTTaGGTGGCTTTAACTCCCCGG +
Preference number: 2 (lower is better)
Translates to: QMPTGGQVQPRHVVLLHSTLFFP*VALTPR
Trigger: CCGGGGAGTTAAAGCCACTCAAGGGAAGAAGAGGGT...ACTGTGAAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR TCA 90 bp GCCACTGCGCGTAGCCCCTCTTTCCTACTGTTTAAACCCCATGGCTCCTCTGTCACCCTCTTCTTCCCTTaGGTGGCTTTAACTCCCCGG +
Preference number: 2 (lower is better)
Translates to: ATARSPSFLLFKPHGSSVTLFFP*VALTPR
Trigger: CCGGGGAGTTAAAGCCACTCAAGGGAAGAAGAGGGT...GACAGAGGAGCCATGGGGTTTAAACAGTAGGAAAGAGGGGCTACGCGCAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR TCA 90 bp GAGGAGGGAGAGTATTTCAGAGGGCACGGCAGAACTCGCCCTGCACTTCTTGAGATCCTCTGGGTTGGCTaGATGACCTTCCCGATGGCT +
Preference number: 2 (lower is better)
Translates to: EEGEYFRGHGRTRPALLEILWVG*MTFPMA
Trigger: AGCCATCGGGAAGGTCATTCAGCCAACCCAGAGGAT...CTCAAGAAGTGCAGGGCGAGTTCTGCCGTGCCCTCTGAAATACTCTCCCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR-3UTR GCA 90 bp GCCGACGCTCTAGGCTCTTGTCAGAGAAAACCTCTTCTTCCAGAAGGGGTAAGACTCTCAGGAGGAGAGTaGTGCCCCGCTTCAGGGAGC +
Preference number: 2 (lower is better)
Translates to: ADALGSCQRKPLLPEGVRLSGGE*CPASGS
Trigger: GCTCCCTGAAGCGGGGCAGCACTCTCCTCCTGAGAG...TCTTACCCCTTCTGGAAGAAGAGGTTTTCTCTGACAAGAGCCTAGAGCGTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR GCA 90 bp GGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGCTTGACCTTTGTGGCTaGTCTCCTGGTGACCGATCT +
Preference number: 2 (lower is better)
Translates to: GALRLSREGSERRESISELDLCG*SPGDRS
Trigger: AGATCGGTCACCAGGAGAGCAGCCACAAAGGTCAAG...CTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR-3UTR GCA 90 bp GACATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTTTGTGGGGTAGCATCTaGACCAGCAAGGGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: DMVHSGSRGRALRGGRVFLWGSI*TSKGWK
Trigger: CTTCCAGCCCTTGCTGGTGCAGATGCTACCCCACAA...AAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR-3UTR CCA 90 bp CCAGCAAGGGCTGGAAGGAGCACAGAGCCTGGGTTTGCTTCCGTGTGTGTCTTTGGTGACCGATCTCCTTaGGGAGCACTTGGCAGCTTA +
Preference number: 2 (lower is better)
Translates to: PARAGRSTEPGFASVCVFGDRSP*GALGSL
Trigger: TAAGCTGCCAAGTGCTCCCCAAGGAGATCGGTCACC...AAAGACACACACGGAAGCAAACCCAGGCTCTGTGCTCCTTCCAGCCCTTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR-3UTR CCA 90 bp ATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGGGTGACCGATCTCCTTaGGGAGCACTTGGCAGCTTA +
Preference number: 2 (lower is better)
Translates to: MVHSGSRGRALRGGRVFQGDRSP*GALGSL
Trigger: TAAGCTGCCAAGTGCTCCCCAAGGAGATCGGTCACC...CTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR-3UTR CCA 90 bp CAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTTCACAGTAATGAACGAAGTCACTaGCTGCTGCTATGCCCCACC +
Preference number: 2 (lower is better)
Translates to: QMPTGGQVQPRHVVLLHSNERSH*LLLCPT
Trigger: GGTGGGGCATAGCAGCAGCCAGTGACTTCGTTCATT...ACTGTGAAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR CCA 90 bp GGAGAGTATTTCAGAGGGCACGGCAGAACTCGCCCTGCACTTCTTGAGGACAGGAAGGAGCACAGAGCCTaGGTTTGCTTCCGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: GEYFRGHGRTRPALLEDRKEHRA*VCFRVC
Trigger: ACACACACGGAAGCAAACCCAGGCTCTGTGCTCCTT...CCTGTCCTCAAGAAGTGCAGGGCGAGTTCTGCCGTGCCCTCTGAAATACTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR-3UTR CCA 90 bp CATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAAAGGAGCACAGAGCCTaGGTTTGCTTCCGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: HGALRLSREGSERRESISKEHRA*VCFRVC
Trigger: ACACACACGGAAGCAAACCCAGGCTCTGTGCTCCTT...TGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR-3UTR TCA 90 bp GAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTCGTTCTTCTTCACAGTaGTGCATCTGCTCAAGACTC +
Preference number: 2 (lower is better)
Translates to: ELSSNADGRTGAAPTCRSRSSSQ*CICSRL
Trigger: GAGTCTTGAGCAGATGCATCACTGTGAAGAAGAACG...AGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR GCA 90 bp ATGCATCTGCTCAAGACTCCTGACTCCTGCCCACCCCAAACAAAGCTGTGCTGTGAAGTCACTGGCTGCTaGTATGCCCCACCACATAGC +
Preference number: 2 (lower is better)
Translates to: MHLLKTPDSCPPQTKLCCEVTGC*YAPPHS
Trigger: GCTATGTGGTGGGGCATAGCAGCAGCCAGTGACTTC...ACAGCACAGCTTTGTTTGGGGTGGGCAGGAGTCAGGAGTCTTGAGCAGATGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR GCA 90 bp GCCGACGCTCTAGGCTCTTGTCAGAGAAAACCTCTTCTTCCAGAAGGGGTAAGATCAGGAGGAGAGTGCTaGCCCGCTTCAGGGAGCTTT +
Preference number: 2 (lower is better)
Translates to: ADALGSCQRKPLLPEGVRSGGEC*PASGSF
Trigger: AAAGCTCCCTGAAGCGGGGCAGCACTCTCCTCCTGA...TCTTACCCCTTCTGGAAGAAGAGGTTTTCTCTGACAAGAGCCTAGAGCGTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR CCA 90 bp ATGCATCTGCTCAAGACTCCTGACTCCTGCCCACCCCAAACAAAGCTGTGCTGTCAAAGCTGTGCTGTGTaGCCTCCTGTTTCCGACACG +
Preference number: 2 (lower is better)
Translates to: MHLLKTPDSCPPQTKLCCQSCAV*PPVSDT
Trigger: CGTGTCGGAAACAGGAGGCCACACAGCACAGCTTTG...ACAGCACAGCTTTGTTTGGGGTGGGCAGGAGTCAGGAGTCTTGAGCAGATGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR TCA 90 bp GAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTCTGTTTCCGACACGTTaGGGGAGTACAAAGAACTTT +
Preference number: 2 (lower is better)
Translates to: ELSSNADGRTGAAPTCRSLFPTR*GSTKNF
Trigger: AAAGTTCTTTGTACTCCCTCAACGTGTCGGAAACAG...AGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR CCA 90 bp AGAGTTCCAGAGCATTCTGTGAAGCCAGAGGAAGGCTTCAGGCGAGGCCACAAGCTACATCCTCTGGGTTaGCTGAATGACCTTCCCGAT +
Preference number: 2 (lower is better)
Translates to: RVPEHSVKPEEGFRRGHKLHPLG*LNDLPD
Trigger: ATCGGGAAGGTCATTCAGCCAACCCAGAGGATGTAG...CTTGTGGCCTCGCCTGAAGCCTTCCTCTGGCTTCACAGAATGCTCTGGAACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372982.8
3UTR-3UTR TCA 90 bp GTTTCCGACACGTTGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACTGGACCCAGGGTTGCTaGGACTGCAGTGAGCTGAGA +
Preference number: 2 (lower is better)
Translates to: VSDTLREYKELFISSTEHWTQGC*DCSELR
Trigger: TCTCAGCTCACTGCAGTCTCAGCAACCCTGGGTCCA...GTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR TCA 90 bp AAGTGGAAGAGCAGAGAGGTGGATGTGATTGCAAAGAGACAGCATGAGGGAGAACCCTGGCCAACCTGGTaGAACCCCGTCTCTACCAAA +
Preference number: 2 (lower is better)
Translates to: KWKSREVDVIAKRQHEGEPWPTW*NPVSTK
Trigger: TTTGGTAGAGACGGGGTTTCACCAGGTTGGCCAGGG...TTCTCCCTCATGCTGTCTCTTTGCAATCACATCCACCTCTCTGCTCTTCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR CAA 90 bp CACCCCAAACAAAGCTGTGCTGTGTGGCCTCCTGTTTCCGACACGTaGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACTTG +
Preference number: 2 (lower is better)
Translates to: HPKQSCAVWPPVSDT*REYKELFISSTEHL
Trigger: CAAGTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAAACAGGAGGCCACACAGCACAGCTTTGTTTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR TCA 90 bp GAAGGGGTAAGACTTGGCAGTTCCCAAGCACACATTCCTCACAGGGGCAATAAAAGGCGGGTTATCACTTaGGGTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: EGVRLGSSQAHIPHRGNKRRVIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAAGTGATAACCCGCCT...TTTATTGCCCCTGTGAGGAATGTGTGCTTGGGAACTGCCAAGTCTTACCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR TCA 90 bp GCCACTGCGCGTAGCCCCTCTTTCCTACTGTTTAAACCCCATGGCTCCTCTGTCTGGTGCCACAAATTGTaGGTCAATAAAAGGGATCCA +
Preference number: 2 (lower is better)
Translates to: ATARSPSFLLFKPHGSSVWCHKL*VNKRDP
Trigger: TGGATCCCTTTTATTGACTCACAATTTGTGGCACCA...GACAGAGGAGCCATGGGGTTTAAACAGTAGGAAAGAGGGGCTACGCGCAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR TCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTCTGGACTCTGCCACGTaGCAGTCAGTAGGAACTGAC +
Preference number: 2 (lower is better)
Translates to: ANVPGHILSFEPLFHQQALDSAT*QSVGTD
Trigger: GTCAGTTCCTACTGACTGTCACGTGGCAGAGTCCAG...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372978.7
3UTR-3UTR GCA 90 bp CTTTCCTACTGTTTAAACCCCATGGCTCCTCTGTCAAGTCCCAGCATAATAGAGGGAGCTTTCGTCAAATaGCGACGGGAGGACAGGTGC +
Preference number: 2 (lower is better)
Translates to: LSYCLNPMAPLSSPSIIEGAFVK*RREDRC
Trigger: GCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTCC...CTCTATTATGCTGGGACTTGACAGAGGAGCCATGGGGTTTAAACAGTAGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR TCA 90 bp ATCTCTCAGGAGGAGAGTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACTTTCCCTGGTCTCTTaGGTTTCAAAGGAATCAAAT +
Preference number: 2 (lower is better)
Translates to: ISQEESAAPLQGAFVKCRLSLVS*VSKESN
Trigger: ATTTGATTCCTTTGAAACTCAAGAGACCAGGGAAAG...TCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCACTCTCCTCCTGAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR GCA 90 bp AAGTGGAAGAGCAGAGAGGTGGATGTGATTGCAAAGAGACAGCATGAGGGAGAACTAAGTTCCCAGGTGTaGTTAGGCCAACACAAGGGC +
Preference number: 2 (lower is better)
Translates to: KWKSREVDVIAKRQHEGELSSQV*LGQHKG
Trigger: GCCCTTGTGTTGGCCTAAGCACACCTGGGAACTTAG...TTCTCCCTCATGCTGTCTCTTTGCAATCACATCCACCTCTCTGCTCTTCCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR-3UTR CCA 90 bp TATCCTGAAATACACGCTGGACAAACAGTCTTCCTTGTAATAAGCACAGCAGCAAACTCCCCGGGAGGGTaGAATCTGCGCCCCTGTACA +
Preference number: 2 (lower is better)
Translates to: YPEIHAGQTVFLVISTAANSPGG*NLRPCT
Trigger: TGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTT...TGCTGCTGTGCTTATTACAAGGAAGACTGTTTGTCCAGCGTGTATTTCAGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR CCA 90 bp GTTTCCGACACGTTGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACGTAATCGCAACTCTTTaGGAGGCCAATGCGGGTGGA +
Preference number: 2 (lower is better)
Translates to: VSDTLREYKELFISSTEHVIATL*EANAGG
Trigger: TCCACCCGCATTGGCCTCCCAAAGAGTTGCGATTAC...GTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR CCA 90 bp GAGCTGAGATTGCACCACTGCAATCTTGACAATCCACTGCAATCCAGCCTGGGCAATTCACCAAGGGAATaGAAGACTAAGAGATGGGCT +
Preference number: 2 (lower is better)
Translates to: ELRLHHCNLDNPLQSSLGNSPRE*KTKRWA
Trigger: AGCCCATCTCTTAGTCTTCCATTCCCTTGGTGAATT...GCCCAGGCTGGATTGCAGTGGATTGTCAAGATTGCAGTGGTGCAATCTCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR CAA 90 bp GGTATGTTAAGAATGAAGTTGTTCTCCCCACAGGATACAAATTGGTaGGACAGACTCAGACCTGCTTCTTGCAGAACGCCTCAGCTTGGC +
Preference number: 2 (lower is better)
Translates to: GMLRMKLFSPQDTNW*DRLRPASCRTPQLG
Trigger: GCCAAGCTGAGGCGTTCTGCAAGAAGCAGGTCTGAGTCTGTCCAACCAATTTGTATCCTGTGGGGAGAACAACTTCATTCTTAACATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR-3UTR TCA 90 bp GTTTCAAAGGAATCAAATCCTGTGATAATGAACGAAGTCACTGGCTGCTGCTATTGGACCCAGGGTTGCTaGGACTGCAGTGAGCTGAGA +
Preference number: 2 (lower is better)
Translates to: VSKESNPVIMNEVTGCCYWTQGC*DCSELR
Trigger: TCTCAGCTCACTGCAGTCTCAGCAACCCTGGGTCCA...ATAGCAGCAGCCAGTGACTTCGTTCATTATCACAGGATTTGATTCCTTTGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR TCA 90 bp GAGCTGAGATTGCACCACTGCAATCTTGACAATCCACTGCAATCCAGCCTGGGCAGTGGGAGAAACAGATaGAACAGAATCAACAAGCTA +
Preference number: 2 (lower is better)
Translates to: ELRLHHCNLDNPLQSSLGSGRNR*NRINKL
Trigger: TAGCTTGTTGATTCTGTTTCATCTGTTTCTCCCACT...GCCCAGGCTGGATTGCAGTGGATTGTCAAGATTGCAGTGGTGCAATCTCAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR CAA 90 bp GTAGGGTATGTTAAGAATGAAGTTGTTCTCCCCACAGGATACAAATaGGTTGGACAGACTCAGACCTGCTTCTTGCAGAACGCCTCAGCT +
Preference number: 2 (lower is better)
Translates to: VGYVKNEVVLPTGYK*VGQTQTCFLQNASA
Trigger: AGCTGAGGCGTTCTGCAAGAAGCAGGTCTGAGTCTGTCCAACCAATTTGTATCCTGTGGGGAGAACAACTTCATTCTTAACATACCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR-3UTR GCA 90 bp TTCTGTTCATATCTTCCTCAACCCAAACATCCAGTGAAAATAGGTCATCTTAATTGTCCGATCACACCCTaGAGCCTCGGCTTGGCCATG +
Preference number: 2 (lower is better)
Translates to: FCSYLPQPKHPVKIGHLNCPITP*SLGLAM
Trigger: CATGGCCAAGCCGAGGCTGCAGGGTGTGATCGGACA...ATTAAGATGACCTATTTTCACTGGATGTTTGGGTTGAGGAAGATATGAACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR GCA 90 bp AAGTGGAAGAGCAGAGAGGTGGATGTGATTGCAAAGAGACAGCATGAGGGAGAAATAGGCCAGTCTAACTaGTTCGATCTAGGAGAGTTT +
Preference number: 2 (lower is better)
Translates to: KWKSREVDVIAKRQHEGEIGQSN*FDLGEF
Trigger: AAACTCTCCTAGATCGAAGCAGTTAGACTGGCCTAT...TTCTCCCTCATGCTGTCTCTTTGCAATCACATCCACCTCTCTGCTCTTCCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR-3UTR GCA 90 bp GCCAAAGGGGAATACATGAAGCTAAATATGGACGTTAGGATTCTAATTTGGGAAAACGAAGTCACTGGCTaGTGCTATGCCCCACCACAT +
Preference number: 2 (lower is better)
Translates to: AKGEYMKLNMDVRILIWENEVTG*CYAPPH
Trigger: ATGTGGTGGGGCATAGCAGCAGCCAGTGACTTCGTT...TTCCCAAATTAGAATCCTAACGTCCATATTTAGCTTCATGTATTCCCCTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR-3UTR GCA 90 bp CTTTCCTACTGTTTAAACCCCATGGCTCCTCTGTCAAGTCCCAGCATAATAGAGCTTAATAAGACGGTTTaGCATGAAAATCATGTCCGA +
Preference number: 2 (lower is better)
Translates to: LSYCLNPMAPLSSPSIIELNKTV*HENHVR
Trigger: TCGGACATGATTTTCATGGCAAACCGTCTTATTAAG...CTCTATTATGCTGGGACTTGACAGAGGAGCCATGGGGTTTAAACAGTAGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR CCA 90 bp ATTTGGCCCATAGGCCACAATTTACCAACCCTTAATCTAAGAAGAACAAAAACTGGTAGCCCCAAACATTaGAAGAGAGCCCACAACAAG +
Preference number: 2 (lower is better)
Translates to: IWPIGHNLPTLNLRRTKTGSPKH*KRAHNK
Trigger: CTTGTTGTGGGCTCTCTTCCAATGTTTGGGGCTACC...AGTTTTTGTTCTTCTTAGATTAAGGGTTGGTAAATTGTGGCCTATGGGCCAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472818.5
3UTR-3UTR TCA 90 bp TATCCTGAAATACACGCTGGACAAACAGTCTTCCTTGTAATAAGCACAGCAGCACTTTCCCTGGTCTCTTaGGTTTCAAAGGAATCAAAT +
Preference number: 2 (lower is better)
Translates to: YPEIHAGQTVFLVISTAALSLVS*VSKESN
Trigger: ATTTGATTCCTTTGAAACTCAAGAGACCAGGGAAAG...TGCTGCTGTGCTTATTACAAGGAAGACTGTTTGTCCAGCGTGTATTTCAGGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR CAA 90 bp GTGCTTAGGCCAACACAAGGGCTAAGCCTGACTTATTTGTCCACATaGCTGTTAACTTTTGAACACAAATTAAGTTCAAAGCTTACAGTT +
Preference number: 2 (lower is better)
Translates to: VLRPTQGLSLTYLST*LLTFEHKLSSKLTV
Trigger: AACTGTAAGCTTTGAACTTAATTTGTGTTCAAAAGTTAACAGCAATGTGGACAAATAAGTCAGGCTTAGCCCTTGTGTTGGCCTAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR-3UTR GCA 90 bp TTCTGTTCATATCTTCCTCAACCCAAACATCCAGTGAAAATAGGTCATCTTAATCTTAATAAGACGGTTTaGCATGAAAATCATGTCCGA +
Preference number: 2 (lower is better)
Translates to: FCSYLPQPKHPVKIGHLNLNKTV*HENHVR
Trigger: TCGGACATGATTTTCATGGCAAACCGTCTTATTAAG...ATTAAGATGACCTATTTTCACTGGATGTTTGGGTTGAGGAAGATATGAACAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR CAA 90 bp GTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCACCCTGCAGCCTCGGCTaGGCCATGAGGAGGTCACCC +
Preference number: 3 (lower is better)
Translates to: VLPRFRELSSNADGRTGAPCSLG*AMRRSP
Trigger: GGGTGACCTCCTCATGGCCAAGCCGAGGCTGCAGGG...TGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR TCA 72 bp CCCGATGGCTGCGCCTGGCCCGTCACCTGGGCGATCTaGCAAGCTTGTGGGGTAGCATCTGCACCAGCAAGG +
Preference number: 3 (lower is better)
Translates to: PDGCAWPVTWAI*QACGVASAPAR
Trigger: CCTTGCTGGTGCAGATGCTACCCCACAAGCTTGTCAGATCGCCCAGGTGACGGGCCAGGCGCAGCCATCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR GCA 72 bp GAGAGTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATaGCGACGGGAGGACAGGTGCAGCCCCGACATGTCG +
Preference number: 3 (lower is better)
Translates to: ESAAPLQGAFVK*RREDRCSPDMS
Trigger: CGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCACTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR CAA 90 bp GGTTGGCTGAATGACCTTCCCGATGGCTGCGCCTGGCCCGTCACCTGGGCGATCCCGTGTGTGTCTTTCTaGACCTTTGTGGCTGCTCTC +
Preference number: 3 (lower is better)
Translates to: GWLNDLPDGCAWPVTWAIPCVSF*TFVAAL
Trigger: GAGAGCAGCCACAAAGGTCAAGAAAGACACACACGG...GATCGCCCAGGTGACGGGCCAGGCGCAGCCATCGGGAAGGTCATTCAGCCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR TCA 72 bp TTGAGGACAGGGTCTACATCCTCTGGGTTGGCTGAATaGCCTTCCCGATGGCTGCGCCTGGCCCGTCACCTG +
Preference number: 3 (lower is better)
Translates to: LRTGSTSSGLAE*PSRWLRLARHL
Trigger: CAGGTGACGGGCCAGGCGCAGCCATCGGGAAGGTCATTCAGCCAACCCAGAGGATGTAGACCCTGTCCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR CCA 72 bp TATATGGCCAGGCCCTGTGAGGAGAAGCAGGGTTCCTaGGCACCTCCAAGAGCTCAGGAGGGATGCAGGCCT +
Preference number: 3 (lower is better)
Translates to: YMARPCEEKQGS*APPRAQEGCRP
Trigger: AGGCCTGCATCCCTCCTGAGCTCTTGGAGGTGCCCAGGAACCCTGCTTCTCCTCACAGGGCCTGGCCATATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372982.8
3UTR-3UTR CAA 90 bp GTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAAGGCAGGAGAATCACTaGGACCCAGGGTTGCTGAGA +
Preference number: 3 (lower is better)
Translates to: VLPRFRELSSNADGRTGARQENH*DPGLLR
Trigger: TCTCAGCAACCCTGGGTCCAAGTGATTCTCCTGCCT...TGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR CAA 90 bp CTGCGCCTGGCCCGTCACCTGGGCGATCTGACAAGCTTGTGGGGTAGCATCTGCCCGTGTGTGTCTTTCTaGACCTTTGTGGCTGCTCTC +
Preference number: 3 (lower is better)
Translates to: LRLARHLGDLTSLWGSICPCVSF*TFVAAL
Trigger: GAGAGCAGCCACAAAGGTCAAGAAAGACACACACGG...GCAGATGCTACCCCACAAGCTTGTCAGATCGCCCAGGTGACGGGCCAGGCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR-3UTR CAA 90 bp CTACATCCTCTGGGTTGGCTGAATGACCTTCCCGATGGCTGCGCCTGGCCCGTCGCACAGAGCCTGGGTTaGCTTCCGTGTGTGTCTTTC +
Preference number: 3 (lower is better)
Translates to: LHPLGWLNDLPDGCAWPVAQSLG*LPCVSF
Trigger: GAAAGACACACACGGAAGCAAACCCAGGCTCTGTGC...GACGGGCCAGGCGCAGCCATCGGGAAGGTCATTCAGCCAACCCAGAGGATGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR TCA 72 bp CGGCTTGGCCATGAGGAGGTCACCCTCTTCTTCCCTTaGGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGC +
Preference number: 3 (lower is better)
Translates to: RLGHEEVTLFFP*VALTPREGGIC
Trigger: GCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAAGGGAAGAAGAGGGTGACCTCCTCATGGCCAAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR TCA 72 bp CTTCTTGAGGACAGGGTCTACATCCTCTGGGTTGGCTaGATGACCTTCCCGATGGCTGCGCCTGGCCCGTCA +
Preference number: 3 (lower is better)
Translates to: LLEDRVYILWVG*MTFPMAAPGPS
Trigger: TGACGGGCCAGGCGCAGCCATCGGGAAGGTCATTCAGCCAACCCAGAGGATGTAGACCCTGTCCTCAAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR GCA 72 bp CTGCTTCTTGCAGAACGCCTCAGCTTGGCTCACTCCTaGCCATCCACCAGCCTTCCAGCTGACCAGCCGTTT +
Preference number: 3 (lower is better)
Translates to: LLLAERLSLAHS*PSTSLPADQPF
Trigger: AAACGGCTGGTCAGCTGGAAGGCTGGTGGATGGGCAGGAGTGAGCCAAGCTGAGGCGTTCTGCAAGAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR-3UTR CAA 90 bp GAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTAGCTCAACGGAGCACTaGGGAGGCCAGATGAGGAGA +
Preference number: 3 (lower is better)
Translates to: ELSSNADGRTGAAPTCRSSSTEH*GGQMRR
Trigger: TCTCCTCATCTGGCCTCCCAAGTGCTCCGTTGAGCT...AGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR CAA 90 bp ATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGGGCGATCTGACAAGCTaGTGGGGTAGCATCTGCACC +
Preference number: 3 (lower is better)
Translates to: MVHSGSRGRALRGGRVFQGDLTS*WGSICT
Trigger: GGTGCAGATGCTACCCCACAAGCTTGTCAGATCGCC...CTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR TCA 72 bp CATGTCCGATCACACCCTGCAGCCTCGGCTTGGCCATaGGGAGGTCACCCTCTTCTTCCCTTGAGTGGCTTT +
Preference number: 3 (lower is better)
Translates to: HVRSHPAASAWP*GGHPLLPLSGF
Trigger: AAAGCCACTCAAGGGAAGAAGAGGGTGACCTCCTCATGGCCAAGCCGAGGCTGCAGGGTGTGATCGGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR TCA 72 bp AAGACATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTaGGAGGAGGGAGAGTATTTCAGAGGGCACGGCAGA +
Preference number: 3 (lower is better)
Translates to: KTWCTQALEGGL*EEGEYFRGHGR
Trigger: TCTGCCGTGCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR GCA 72 bp GGTGGCGGAGCTTGCGGTGAGCTGAGATTGCACCACTaGAATCTTGACAATCCACTGCAATCCAGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: GGGACGELRLHH*NLDNPLQSSLG
Trigger: GCCCAGGCTGGATTGCAGTGGATTGTCAAGATTGCAGTGGTGCAATCTCAGCTCACCGCAAGCTCCGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR GCA 72 bp AAGACTCCTGACTCCTGCCCACCCCAAACAAAGCTGTaGTGTGTGGCCTCCTGTTTCCGACACGTTGAGGGA +
Preference number: 3 (lower is better)
Translates to: KTPDSCPPQTKL*CVASCFRHVEG
Trigger: TCCCTCAACGTGTCGGAAACAGGAGGCCACACAGCACAGCTTTGTTTGGGGTGGGCAGGAGTCAGGAGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR GCA 72 bp CAGGGAGCTTTCGTCAAATGCCGACGGGAGGACAGGTaGAGCCCCGACATGTCGTTCTTCTTCACAGTGATG +
Preference number: 3 (lower is better)
Translates to: QGAFVKCRREDR*SPDMSFFFTVM
Trigger: CATCACTGTGAAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR CCA 72 bp GACCTTTGTGGCTGCTCTCCTGGTGACCGATCTCCTTaGGGAGCACTTGGCAGCTTAGGGCAAAGTCTCACA +
Preference number: 3 (lower is better)
Translates to: DLCGCSPGDRSP*GALGSLGQSLT
Trigger: TGTGAGACTTTGCCCTAAGCTGCCAAGTGCTCCCCAAGGAGATCGGTCACCAGGAGAGCAGCCACAAAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR TCA 72 bp TTTCAGAGGGCACGGCAGAACTCGCCCTGCACTTCTTaGGGACAGGGTCTACATCCTCTGGGTTGGCTGAAT +
Preference number: 3 (lower is better)
Translates to: FQRARQNSPCTS*GQGLHPLGWLN
Trigger: ATTCAGCCAACCCAGAGGATGTAGACCCTGTCCTCAAGAAGTGCAGGGCGAGTTCTGCCGTGCCCTCTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
3UTR GCA 72 bp TTCACAGTGATGCATCTGCTCAAGACTCCTGACTCCTaGCCACCCCAAACAAAGCTGTGCTGTGTGGCCTCC +
Preference number: 3 (lower is better)
Translates to: FTVMHLLKTPDS*PPQTKLCCVAS
Trigger: GGAGGCCACACAGCACAGCTTTGTTTGGGGTGGGCAGGAGTCAGGAGTCTTGAGCAGATGCATCACTGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR CCA 72 bp CTGACTCCTGCCCACCCCAAACAAAGCTGTGCTGTGTaGCCTCCTGTTTCCGACACGTTGAGGGAGTACAAA +
Preference number: 3 (lower is better)
Translates to: LTPAHPKQSCAV*PPVSDTLREYK
Trigger: TTTGTACTCCCTCAACGTGTCGGAAACAGGAGGCCACACAGCACAGCTTTGTTTGGGGTGGGCAGGAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR CAA 90 bp TCCAGAAGGGGTAAGACTTGGCAGTTCCCAAGCACACATTCCTCACAGGGGCAAAGGCAGGAGAATCACTaGGACCCAGGGTTGCTGAGA +
Preference number: 3 (lower is better)
Translates to: SRRGKTWQFPSTHSSQGQRQENH*DPGLLR
Trigger: TCTCAGCAACCCTGGGTCCAAGTGATTCTCCTGCCT...TTGCCCCTGTGAGGAATGTGTGCTTGGGAACTGCCAAGTCTTACCCCTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR TCA 72 bp AAGTCACTGGCTGCTGCTATGCCCCACCACATAGCCTaGTTGATTAAGAAAGTCTCTGGTGGGGTGCGGTGG +
Preference number: 3 (lower is better)
Translates to: KSLAAAMPHHIA*LIKKVSGGVRW
Trigger: CCACCGCACCCCACCAGAGACTTTCTTAATCAATCAGGCTATGTGGTGGGGCATAGCAGCAGCCAGTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR GCA 72 bp GATACAAATTGGTTGGACAGACTCAGACCTGCTTCTTaGAGAACGCCTCAGCTTGGCTCACTCCTGCCCATC +
Preference number: 3 (lower is better)
Translates to: DTNWLDRLRPAS*RTPQLGSLLPI
Trigger: GATGGGCAGGAGTGAGCCAAGCTGAGGCGTTCTGCAAGAAGCAGGTCTGAGTCTGTCCAACCAATTTGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR GCA 72 bp CCCACAGGATACAAATTGGTTGGACAGACTCAGACCTaGTTCTTGCAGAACGCCTCAGCTTGGCTCACTCCT +
Preference number: 3 (lower is better)
Translates to: PTGYKLVGQTQT*FLQNASAWLTP
Trigger: AGGAGTGAGCCAAGCTGAGGCGTTCTGCAAGAAGCAGGTCTGAGTCTGTCCAACCAATTTGTATCCTGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR-3UTR CAA 90 bp GAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTACTTTCCCTGGTCTCTaGAGTTTCAAAGGAATCAAA +
Preference number: 3 (lower is better)
Translates to: ELSSNADGRTGAAPTCRSTFPGL*SFKGIK
Trigger: TTTGATTCCTTTGAAACTCAAGAGACCAGGGAAAGT...AGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR-3UTR CAA 90 bp ATGCATCTGCTCAAGACTCCTGACTCCTGCCCACCCCAAACAAAGCTGTGCTGTCCTGTTTCCGACACGTaGAGGGAGTACAAAGAACTT +
Preference number: 3 (lower is better)
Translates to: MHLLKTPDSCPPQTKLCCPVSDT*REYKEL
Trigger: AAGTTCTTTGTACTCCCTCAACGTGTCGGAAACAGG...ACAGCACAGCTTTGTTTGGGGTGGGCAGGAGTCAGGAGTCTTGAGCAGATGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR TCA 72 bp GTTCCTGACAAGCAGCTCTTTCCTTACACAGTACAGTaGGGCCAGAAGAACATGGAGCCTGCTGTCAAGTCC +
Preference number: 3 (lower is better)
Translates to: VPDKQLFPYTVQ*GQKNMEPAVKS
Trigger: GGACTTGACAGCAGGCTCCATGTTCTTCTGGCCTCACTGTACTGTGTAAGGAAAGAGCTGCTTGTCAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR TCA 72 bp AAAGCTGTGCTGTGTGGCCTCCTGTTTCCGACACGTTaGGGGAGTACAAAGAACTTTTCATCAGCTCAACGG +
Preference number: 3 (lower is better)
Translates to: KAVLCGLLFPTR*GSTKNFSSAQR
Trigger: CCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAAACAGGAGGCCACACAGCACAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR TCA 72 bp TGCCAGGAGAGAAGTGGAAGAGCAGAGAGGTGGATGTaGTTGCAAAGAGACAGCATGAGGGAGAACTGTACT +
Preference number: 3 (lower is better)
Translates to: CQERSGRAERWM*LQRDSMRENCT
Trigger: AGTACAGTTCTCCCTCATGCTGTCTCTTTGCAATCACATCCACCTCTCTGCTCTTCCACTTCTCTCCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR TCA 72 bp GAGCAGAGAGGTGGATGTGATTGCAAAGAGACAGCATaGGGGAGAACTGTACTGATGCAATGGTTCTGTGTC +
Preference number: 3 (lower is better)
Translates to: EQRGGCDCKETA*GRTVLMQWFCV
Trigger: GACACAGAACCATTGCATCAGTACAGTTCTCCCTCATGCTGTCTCTTTGCAATCACATCCACCTCTCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR-3UTR CAA 90 bp AAGTGGAAGAGCAGAGAGGTGGATGTGATTGCAAAGAGACAGCATGAGGGAGAACTGTGTCTTCACCATTaGTGTGCTGGTGGTTACACA +
Preference number: 3 (lower is better)
Translates to: KWKSREVDVIAKRQHEGELCLHH*CAGGYT
Trigger: TGTGTAACCACCAGCACACAAATGGTGAAGACACAG...TTCTCCCTCATGCTGTCTCTTTGCAATCACATCCACCTCTCTGCTCTTCCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR-3UTR CAA 90 bp GTTTCAAAGGAATCAAATCCTGTGATAATGAACGAAGTCACTGGCTGCTGCTATCACCCTCTTCTTCCCTaGAGTGGCTTTAACTCCCCG +
Preference number: 3 (lower is better)
Translates to: VSKESNPVIMNEVTGCCYHPLLP*SGFNSP
Trigger: CGGGGAGTTAAAGCCACTCAAGGGAAGAAGAGGGTG...ATAGCAGCAGCCAGTGACTTCGTTCATTATCACAGGATTTGATTCCTTTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR TCA 72 bp GTGATTGCAAAGAGACAGCATGAGGGAGAACTGTACTaGTGCAATGGTTCTGTGTCTTCACCATTTGTGTGC +
Preference number: 3 (lower is better)
Translates to: VIAKRQHEGELY*CNGSVSSPFVC
Trigger: GCACACAAATGGTGAAGACACAGAACCATTGCATCAGTACAGTTCTCCCTCATGCTGTCTCTTTGCAATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR GCA 72 bp GCAAGGGTTTTGATATTGCACCACAGTTATGCAAGATaGTACCACTGGGAGAAAGTGGGTGATGGGTACATA +
Preference number: 3 (lower is better)
Translates to: ARVLILHHSYAR*YHWEKVGDGYI
Trigger: TATGTACCCATCACCCACTTTCTCCCAGTGGTAGCATCTTGCATAACTGTGGTGCAATATCAAAACCCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR TCA 72 bp GTGGGAGAAACAGATGAAACAGAATCAACAAGCTACTaGCAAGTGTGGAAGCTTGATGAGGCATATACAGGG +
Preference number: 3 (lower is better)
Translates to: VGETDETESTSY*QVWKLDEAYTG
Trigger: CCCTGTATATGCCTCATCAAGCTTCCACACTTGTCAGTAGCTTGTTGATTCTGTTTCATCTGTTTCTCCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR TCA 72 bp CCATTTGTGTGCTGGTGGTTACACAAATCTACACGATaGAACTGCACGGAACAACACACACATAACACACAC +
Preference number: 3 (lower is better)
Translates to: PFVCWWLHKSTR*NCTEQHTHNTH
Trigger: GTGTGTGTTATGTGTGTGTTGTTCCGTGCAGTTTCATCGTGTAGATTTGTGTAACCACCAGCACACAAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR CCA 72 bp TTAAGAATGAAGTTGTTCTCCCCACAGGATACAAATTaGTTGGACAGACTCAGACCTGCTTCTTGCAGAACG +
Preference number: 3 (lower is better)
Translates to: LRMKLFSPQDTN*LDRLRPASCRT
Trigger: CGTTCTGCAAGAAGCAGGTCTGAGTCTGTCCAACCAATTTGTATCCTGTGGGGAGAACAACTTCATTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR GCA 72 bp TACACACAACCACCTAGATGGACCTCAAGAGAATTATaGAGAACTGAAAAAGCCAACGTCAAAAAGTCCCAT +
Preference number: 3 (lower is better)
Translates to: YTQPPRWTSREL*RTEKANVKKSH
Trigger: ATGGGACTTTTTGACGTTGGCTTTTTCAGTTCTGCATAATTCTCTTGAGGTCCATCTAGGTGGTTGTGTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR-3UTR CAA 90 bp GCCAAAGGGGAATACATGAAGCTAAATATGGACGTTAGGATTCTAATTTGGGAAGTTCACTTCCACGTGTaGTTACATTTTTCTTCCTTG +
Preference number: 3 (lower is better)
Translates to: AKGEYMKLNMDVRILIWEVHFHV*LHFSSL
Trigger: CAAGGAAGAAAAATGTAACAACACGTGGAAGTGAAC...TTCCCAAATTAGAATCCTAACGTCCATATTTAGCTTCATGTATTCCCCTTTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR-3UTR CAA 90 bp TGGCCCATAGGCCACAATTTACCAACCCTTAATCTAAGAAGAACAAAAACTTTCAAGATGGTTTACCTTTaGGTGACTGAATTTCACATG +
Preference number: 3 (lower is better)
Translates to: WPIGHNLPTLNLRRTKTFKMVYL*VTEFHM
Trigger: CATGTGAAATTCAGTCACCAAAAGGTAAACCATCTT...GAAAGTTTTTGTTCTTCTTAGATTAAGGGTTGGTAAATTGTGGCCTATGGGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472818.5
3UTR TCA 72 bp CAGCAATATCTCAAAGATGGTTTACCTTTTGGTGACTaGATTTCACATGCTAATCAGACTAGCCCAAATAAA +
Preference number: 3 (lower is better)
Translates to: QQYLKDGLPFGD*ISHANQTSPNK
Trigger: TTTATTTGGGCTAGTCTGATTAGCATGTGAAATTCAGTCACCAAAAGGTAAACCATCTTTGAGATATTGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472818.5
3UTR CCA 72 bp TACATGAAGCTAAATATGGACGTTAGGATTCTAATTTaGGAAACAAGCTTATTCATCCAGTGTTCACTTCCA +
Preference number: 3 (lower is better)
Translates to: YMKLNMDVRILI*ETSLFIQCSLP
Trigger: TGGAAGTGAACACTGGATGAATAAGCTTGTTTCCCAAATTAGAATCCTAACGTCCATATTTAGCTTCATGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CCA 90 bp CTGGGTTGGCTGAATGACCTTCCCGATGGCTGCGCCTGGCCCGTCACCTGGGCGGGGATGTGCGGCGGGTaGGGTCGGTTCTGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LGWLNDLPDGCAWPVTWAGMCGG*GRFCPA
Trigger: TGCAGGGCAGAACCGACCCCACCCGCCGCACATCCC...CGCCCAGGTGACGGGCCAGGCGCAGCCATCGGGAAGGTCATTCAGCCAACCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp CTGCGCCTGGCCCGTCACCTGGGCGATCTGACAAGCTTGTGGGGTAGCATCTGCGGGTGGGGTCGGTTCTaGCCTGCAGTGAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LRLARHLGDLTSLWGSICGWGRF*PAVRAL
Trigger: CAAGGCCCTCACTGCAGGGCAGAACCGACCCCACCC...GCAGATGCTACCCCACAAGCTTGTCAGATCGCCCAGGTGACGGGCCAGGCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp TCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCACGGCAGAACTCCACCGGCCCCAGCTGTaGCCGCCGCGTCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: SREGSERRESISEGTAELHRPQL*PPRRPS
Trigger: AGATGGCCGACGCGGCGGCCACAGCTGGGGCCGGTG...GAGTTCTGCCGTGCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp GGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCACGGCAGAACTCGCCCTGCACCCCGATGGCTGCGCCTaGCCCGTCACCTGGGCGATC +
Preference number: 4 (lower is better)
Translates to: GSERRESISEGTAELALHPDGCA*PVTWAI
Trigger: GATCGCCCAGGTGACGGGCCAGGCGCAGCCATCGGG...GTGCAGGGCGAGTTCTGCCGTGCCCTCTGAAATACTCTCCCTCCTCTCAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp ACCTTCCCGATGGCTGCGCCTGGCCCGTCACCTGGGCGATCTGACAAGCTTGTGTGGCTGCTCTCCTGGTaGCCGATCTCCTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: TFPMAAPGPSPGRSDKLVWLLSW*PISLGS
Trigger: GCTCCCCAAGGAGATCGGTCACCAGGAGAGCAGCCA...CACAAGCTTGTCAGATCGCCCAGGTGACGGGCCAGGCGCAGCCATCGGGAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp GTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAGGGTCGGTTCTGCCCTaGAGTGAGGGCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: VLPRFRELSSNADGRTGAGSVLP*SEGLGG
Trigger: ACCCCCAAGGCCCTCACTGCAGGGCAGAACCGACCC...TGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp CGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAGCCCCGACAGGGTGGGGTCGGTTCTaGCCTGCAGTGAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RFRELSSNADGRTGAAPTGWGRF*PAVRAL
Trigger: CAAGGCCCTCACTGCAGGGCAGAACCGACCCCACCC...TGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp TTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCCACCGGCCCCAGCTGTaGCCGCCGCGTCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: FNSPGGWNLRPCTSQVSFHRPQL*PPRRPS
Trigger: AGATGGCCGACGCGGCGGCCACAGCTGGGGCCGGTG...GAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp GACATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCACCGGCCCCAGCTGTaGCCGCCGCGTCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: DMVHSGSRGRALRGGRVFHRPQL*PPRRPS
Trigger: AGATGGCCGACGCGGCGGCCACAGCTGGGGCCGGTG...AAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp GGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGCCCGATGGCTGCGCCTaGCCCGTCACCTGGGCGATC +
Preference number: 4 (lower is better)
Translates to: GALRLSREGSERRESISEPDGCA*PVTWAI
Trigger: GATCGCCCAGGTGACGGGCCAGGCGCAGCCATCGGG...CTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp CTGGGTTGGCTGAATGACCTTCCCGATGGCTGCGCCTGGCCCGTCACCTGGGCGGAGAAGCAGGGTTCCTaGGCACCTCCAAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LGWLNDLPDGCAWPVTWAEKQGS*APPRAQ
Trigger: CTGAGCTCTTGGAGGTGCCCAGGAACCCTGCTTCTC...CGCCCAGGTGACGGGCCAGGCGCAGCCATCGGGAAGGTCATTCAGCCAACCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372982.8
3UTR CAA 72 bp CTGCGCCTGGCCCGTCACCTGGGCGATCTGACAAGCTaGTGGGGTAGCATCTGCACCAGCAAGGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LRLARHLGDLTS*WGSICTSKGWK
Trigger: CTTCCAGCCCTTGCTGGTGCAGATGCTACCCCACAAGCTTGTCAGATCGCCCAGGTGACGGGCCAGGCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp TCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCACGGGGTTCTGCCCTGCAGTaGGGGCCTTGGGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: SGSRGRALRGGRVFQRARGSALQ*GPWGSL
Trigger: CAGTGACCCCCAAGGCCCTCACTGCAGGGCAGAACC...CCGTGCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp CTGGGTTGGCTGAATGACCTTCCCGATGGCTGCGCCTGGCCCGTCACCTGGGCGTCGCCCTGCACTTCTTaGGGACAGGGTCTACATCCT +
Preference number: 4 (lower is better)
Translates to: LGWLNDLPDGCAWPVTWASPCTS*GQGLHP
Trigger: AGGATGTAGACCCTGTCCTCAAGAAGTGCAGGGCGA...CGCCCAGGTGACGGGCCAGGCGCAGCCATCGGGAAGGTCATTCAGCCAACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp GTGCAGGGCTTTGGGTTGGAGCTGGCTATATGGCCAGGCCCTGTGAGGAGAAGCGGGTCGGTTCTGCCCTaGAGTGAGGGCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: VQGFGLELAIWPGPVRRSGSVLP*SEGLGG
Trigger: ACCCCCAAGGCCCTCACTGCAGGGCAGAACCGACCC...GCTTCTCCTCACAGGGCCTGGCCATATAGCCAGCTCCAACCCAAAGCCCTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR GCA 90 bp GGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCGGGTCGGTTCTGCCCTaGAGTGAGGGCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GFNSPGGWNLRPCTSQVSGSVLP*SEGLGG
Trigger: ACCCCCAAGGCCCTCACTGCAGGGCAGAACCGACCC...GGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR GCA 90 bp ACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGGGGTGGGGTCGGTTCTaGCCTGCAGTGAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: TPREGGICAPVQARFPSQGWGRF*PAVRAL
Trigger: CAAGGCCCTCACTGCAGGGCAGAACCGACCCCACCC...CTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR GCA 90 bp CAGGAGGAGAGTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGAAATGGCTGGGGATGTaGGGCGGGTGGGGTCGGTTC +
Preference number: 4 (lower is better)
Translates to: QEESAAPLQGAFVKCRREKWLGM*GGWGRF
Trigger: GAACCGACCCCACCCGCCGCACATCCCCAGCCATTT...CTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCACTCTCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp GGAAGGCTTCAGGCGAGGCCACAAGACATGGTGCACTCAGGCTCTCGAGGGAGGAAATGGCTGGGGATGTaGGGCGGGTGGGGTCGGTTC +
Preference number: 4 (lower is better)
Translates to: GRLQARPQDMVHSGSRGRKWLGM*GGWGRF
Trigger: GAACCGACCCCACCCGCCGCACATCCCCAGCCATTT...CCTCCCTCGAGAGCCTGAGTGCACCATGTCTTGTGGCCTCGCCTGAAGCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR GCA 90 bp CTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGCATCGCGCCTCTGGGATaGAGCCTTCTCCCGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LPGRVESAPLYKPGFLLSIAPLG*SLLPQD
Trigger: GTCCTGCGGGAGAAGGCTGCATCCCAGAGGCGCGAT...GCTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR GCA 90 bp TCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCACGGCAGAACTCGACCTTCCCGATGGCTaGGCCTGGCCCGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: SREGSERRESISEGTAELDLPDG*AWPVTW
Trigger: CCAGGTGACGGGCCAGGCGCAGCCATCGGGAAGGTC...GAGTTCTGCCGTGCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp TCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCACGGCAGAACGACCTTCCCGATGGCTaGGCCTGGCCCGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: SRGRALRGGRVFQRARQNDLPDG*AWPVTW
Trigger: CCAGGTGACGGGCCAGGCGCAGCCATCGGGAAGGTC...GTTCTGCCGTGCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp AGGAGAAGCAGGGTTCCTGGGCACCTCCAAGAGCTCAGGAGGGATGCAGGCCTCGGCCTTGGGGGTCACTaGCTGATTGGTCACCGGAGG +
Preference number: 4 (lower is better)
Translates to: RRSRVPGHLQELRRDAGLGLGGH*LIGHRR
Trigger: CCTCCGGTGACCAATCAGCCAGTGACCCCCAAGGCC...GAGGCCTGCATCCCTCCTGAGCTCTTGGAGGTGCCCAGGAACCCTGCTTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR CCA 90 bp AGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTGGGATGTGCGGCGGGTaGGGTCGGTTCTGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SGFNSPGGWNLRPCTSQVGMCGG*GRFCPA
Trigger: TGCAGGGCAGAACCGACCCCACCCGCCGCACATCCC...AACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CCA 90 bp GTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCATCCACATCGCGCCTCTaGGATGCAGCCTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: VLPRFRELSSNADGRTGASTSRL*DAAFSR
Trigger: GCGGGAGAAGGCTGCATCCCAGAGGCGCGATGTGGA...TGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp CTGGGTTGGCTGAATGACCTTCCCGATGGCTGCGCCTGGCCCGTCACCTGGGCGGGTGACCGATCTCCTTaGGGAGCACTTGGCAGCTTA +
Preference number: 4 (lower is better)
Translates to: LGWLNDLPDGCAWPVTWAGDRSP*GALGSL
Trigger: TAAGCTGCCAAGTGCTCCCCAAGGAGATCGGTCACC...CGCCCAGGTGACGGGCCAGGCGCAGCCATCGGGAAGGTCATTCAGCCAACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp GCCACAAGACATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGTTGGGGGTCACTGGCTaGTTGGTCACCGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: ATRHGALRLSREGSERRELGVTG*LVTGGA
Trigger: TGCTCCTCCGGTGACCAATCAGCCAGTGACCCCCAA...CTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATGTCTTGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp CTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGCTTGGGGGTCACTGGCTaGTTGGTCACCGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LPGRVESAPLYKPGFLLSLGVTG*LVTGGA
Trigger: TGCTCCTCCGGTGACCAATCAGCCAGTGACCCCCAA...GCTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR TCA 90 bp CACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCAGGTTCTGCCCTGCAGTaGGGGCCTTGGGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: HSGSRGRALRGGRVFQRAGSALQ*GPWGSL
Trigger: CAGTGACCCCCAAGGCCCTCACTGCAGGGCAGAACC...TGCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp GTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTGGTTCTGCCCTGCAGTaGGGGCCTTGGGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: VALTPREGGICAPVQARFGSALQ*GPWGSL
Trigger: CAGTGACCCCCAAGGCCCTCACTGCAGGGCAGAACC...AAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR TCA 90 bp CTACATCCTCTGGGTTGGCTGAATGACCTTCCCGATGGCTGCGCCTGGCCCGTCCAGGACCTGGTAGTCTaGCACGGGCTCACGGTACGT +
Preference number: 4 (lower is better)
Translates to: LHPLGWLNDLPDGCAWPVQDLVV*HGLTVR
Trigger: ACGTACCGTGAGCCCGTGTCAGACTACCAGGTCCTG...GACGGGCCAGGCGCAGCCATCGGGAAGGTCATTCAGCCAACCCAGAGGATGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp GTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAGGTGGGCGGATCACTTaGGGTCAGGAGTTGGAGACC +
Preference number: 4 (lower is better)
Translates to: VLPRFRELSSNADGRTGAGGRIT*GQELET
Trigger: GGTCTCCAACTCCTGACCTCAAGTGATCCGCCCACC...TGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR GCA 90 bp GCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCGAGCTCACAACCACCTaGAGGGTTCTCCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: ALRLSREGSERRESISEGELTTT*RVLLRA
Trigger: GGCCCGGAGGAGAACCCTGCAGGTGGTTGTGAGCTC...GCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp GTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTGGGTGGGGTCGGTTCTaGCCTGCAGTGAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: VALTPREGGICAPVQARFGWGRF*PAVRAL
Trigger: CAAGGCCCTCACTGCAGGGCAGAACCGACCCCACCC...AAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR GCA 90 bp GCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCAAATGGCTGGGGATGTaGGGCGGGTGGGGTCGGTTC +
Preference number: 4 (lower is better)
Translates to: ALRLSREGSERRESISEGKWLGM*GGWGRF
Trigger: GAACCGACCCCACCCGCCGCACATCCCCAGCCATTT...GCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp GGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCCGGGAGGGTGGAATCTaGGCCCCTGTACAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GFNSPGGWNLRPCTSQVSREGGI*APVQAR
Trigger: CCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCG...GGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR GCA 90 bp ACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGCTCTCAGGAGGAGAGTaGTGCCCCGCTTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: TPREGGICAPVQARFPSQLSGGE*CPASGS
Trigger: GCTCCCTGAAGCGGGGCAGCACTCTCCTCCTGAGAG...CTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp CTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGCGGGAGGTGGAGGAGTTaGAGTGAGCTGGGATCGCTC +
Preference number: 4 (lower is better)
Translates to: LPGRVESAPLYKPGFLLSGRWRS*SELGSL
Trigger: GAGCGATCCCAGCTCACTGCAACTCCTCCACCTCCC...GCTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CCA 90 bp CCCTTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCGGCCTTGGGGGTCACTaGCTGATTGGTCACCGGAGG +
Preference number: 4 (lower is better)
Translates to: PLSGFNSPGGWNLRPCTSGLGGH*LIGHRR
Trigger: CCTCCGGTGACCAATCAGCCAGTGACCCCCAAGGCC...GCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CCA 90 bp TTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCGGGATGTGCGGCGGGTaGGGTCGGTTCTGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: FNSPGGWNLRPCTSQVSFGMCGG*GRFCPA
Trigger: TGCAGGGCAGAACCGACCCCACCCGCCGCACATCCC...GAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CCA 90 bp CAGGAGGAGAGTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGACTCAGGAAAATGGCTaGGGATGTGCGGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QEESAAPLQGAFVKCRRETQENG*GCAAGG
Trigger: CCCACCCGCCGCACATCCCCAGCCATTTTCCTGAGT...CTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCACTCTCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp GGAAGGCTTCAGGCGAGGCCACAAGACATGGTGCACTCAGGCTCTCGAGGGAGGACTCAGGAAAATGGCTaGGGATGTGCGGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GRLQARPQDMVHSGSRGRTQENG*GCAAGG
Trigger: CCCACCCGCCGCACATCCCCAGCCATTTTCCTGAGT...CCTCCCTCGAGAGCCTGAGTGCACCATGTCTTGTGGCCTCGCCTGAAGCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR CCA 90 bp GGCACTGTGCAGGGCTTTGGGTTGGAGCTGGCTATATGGCCAGGCCCTGTGAGGGGGAACTCAGGAAAATaGCTGGGGATGTGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: GTVQGFGLELAIWPGPVRGNSGK*LGMCGG
Trigger: CCCGCCGCACATCCCCAGCCATTTTCCTGAGTTCCC...CCTCACAGGGCCTGGCCATATAGCCAGCTCCAACCCAAAGCCCTGCACAGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR CCA 90 bp CACTGTGCAGGGCTTTGGGTTGGAGCTGGCTATATGGCCAGGCCCTGTGAGGAGTCCACATCGCGCCTCTaGGATGCAGCCTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: HCAGLWVGAGYMARPCEESTSRL*DAAFSR
Trigger: GCGGGAGAAGGCTGCATCCCAGAGGCGCGATGTGGA...CTCCTCACAGGGCCTGGCCATATAGCCAGCTCCAACCCAAAGCCCTGCACAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR CCA 90 bp CTACATCCTCTGGGTTGGCTGAATGACCTTCCCGATGGCTGCGCCTGGCCCGTCTGCACCAGCAAGGGCTaGAAGGAGCACAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LHPLGWLNDLPDGCAWPVCTSKG*KEHRAW
Trigger: CCAGGCTCTGTGCTCCTTCCAGCCCTTGCTGGTGCA...GACGGGCCAGGCGCAGCCATCGGGAAGGTCATTCAGCCAACCCAGAGGATGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp GAGGAAGGCTTCAGGCGAGGCCACAAGACATGGTGCACTCAGGCTCTCGAGGGATTGGGGGTCACTGGCTaGTTGGTCACCGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: EEGFRRGHKTWCTQALEGLGVTG*LVTGGA
Trigger: TGCTCCTCCGGTGACCAATCAGCCAGTGACCCCCAA...TCCCTCGAGAGCCTGAGTGCACCATGTCTTGTGGCCTCGCCTGAAGCCTTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR TCA 90 bp TTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCGGTTCTGCCCTGCAGTaGGGGCCTTGGGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: FNSPGGWNLRPCTSQVSFGSALQ*GPWGSL
Trigger: CAGTGACCCCCAAGGCCCTCACTGCAGGGCAGAACC...GAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR TCA 90 bp GGTTGGCTGAATGACCTTCCCGATGGCTGCGCCTGGCCCGTCACCTGGGCGATCGGTACGTCGGAGTTTTaGTGTAGGTGTGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: GWLNDLPDGCAWPVTWAIGTSEF*CRCGDQ
Trigger: CTGATCCCCACACCTACATCAAAACTCCGACGTACC...GATCGCCCAGGTGACGGGCCAGGCGCAGCCATCGGGAAGGTCATTCAGCCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp ACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGCAGGACCTGGTAGTCTaGCACGGGCTCACGGTACGT +
Preference number: 4 (lower is better)
Translates to: TPREGGICAPVQARFPSQQDLVV*HGLTVR
Trigger: ACGTACCGTGAGCCCGTGTCAGACTACCAGGTCCTG...CTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR TCA 90 bp CTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGCACCTCCCAAGAGCAGTaGGAACAGCTGGGATTGGCC +
Preference number: 4 (lower is better)
Translates to: LPGRVESAPLYKPGFLLSTSQEQ*EQLGLA
Trigger: GGCCAATCCCAGCTGTTCTCACTGCTCTTGGGAGGT...GCTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp CACCTGGGCGATCTGACAAGCTTGTGGGGTAGCATCTGCACCAGCAAGGGCTGGTCTGGGTTGGCTGAATaGCCTTCCCGATGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: HLGDLTSLWGSICTSKGWSGLAE*PSRWLR
Trigger: GCGCAGCCATCGGGAAGGTCATTCAGCCAACCCAGA...CCAGCCCTTGCTGGTGCAGATGCTACCCCACAAGCTTGTCAGATCGCCCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp GTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTGAGCTCACAACCACCTaGAGGGTTCTCCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: VALTPREGGICAPVQARFELTTT*RVLLRA
Trigger: GGCCCGGAGGAGAACCCTGCAGGTGGTTGTGAGCTC...AAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR GCA 90 bp GAGGAGGGAGAGTATTTCAGAGGGCACGGCAGAACTCGCCCTGCACTTCTTGAGGGGTCGGTTCTGCCCTaGAGTGAGGGCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: EEGEYFRGHGRTRPALLEGSVLP*SEGLGG
Trigger: ACCCCCAAGGCCCTCACTGCAGGGCAGAACCGACCC...CTCAAGAAGTGCAGGGCGAGTTCTGCCGTGCCCTCTGAAATACTCTCCCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp CATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGGGTGGGGTCGGTTCTaGCCTGCAGTGAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: HGALRLSREGSERRESISGWGRF*PAVRAL
Trigger: CAAGGCCCTCACTGCAGGGCAGAACCGACCCCACCC...TGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp GTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTAAATGGCTGGGGATGTaGGGCGGGTGGGGTCGGTTC +
Preference number: 4 (lower is better)
Translates to: VALTPREGGICAPVQARFKWLGM*GGWGRF
Trigger: GAACCGACCCCACCCGCCGCACATCCCCAGCCATTT...AAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR GCA 90 bp AACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAAAATGGCTGGGGATGTaGGGCGGGTGGGGTCGGTTC +
Preference number: 4 (lower is better)
Translates to: NSPGGWNLRPCTSQVSFSKWLGM*GGWGRF
Trigger: GAACCGACCCCACCCGCCGCACATCCCCAGCCATTT...TGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR GCA 90 bp AGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTATCGCGCCTCTGGGATaGAGCCTTCTCCCGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SGFNSPGGWNLRPCTSQVIAPLG*SLLPQD
Trigger: GTCCTGCGGGAGAAGGCTGCATCCCAGAGGCGCGAT...AACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR GCA 90 bp TCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCACGGCAGAACATCGCGCCTCTGGGATaGAGCCTTCTCCCGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SRGRALRGGRVFQRARQNIAPLG*SLLPQD
Trigger: GTCCTGCGGGAGAAGGCTGCATCCCAGAGGCGCGAT...GTTCTGCCGTGCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp TGGCTGCGCCTGGCCCGTCACCTGGGCGATCTGACAAGCTTGTGGGGTAGCATCAAGGAGGGGTTCTGCTaGAGGACAGAGGTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: WLRLARHLGDLTSLWGSIKEGFC*RTEVFS
Trigger: GGAGAACACCTCTGTCCTGCAGCAGAACCCCTCCTT...GATGCTACCCCACAAGCTTGTCAGATCGCCCAGGTGACGGGCCAGGCGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp GTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAAGCTTGGCTCACTCCTaGCCATCCACCAGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: VLPRFRELSSNADGRTGASLAHS*PSTSLP
Trigger: TGGAAGGCTGGTGGATGGGCAGGAGTGAGCCAAGCT...TGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR GCA 90 bp GGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCACGGCAGGGCCACAAGACATGGTaGACTCAGGCTCTCGAGGGA +
Preference number: 4 (lower is better)
Translates to: GSRGRALRGGRVFQRARQGHKTW*TQALEG
Trigger: TCCCTCGAGAGCCTGAGTGCACCATGTCTTGTGGCC...CTGCCGTGCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp CTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGCCGATATCGGACAGTGTaGGCTGGGTCCTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LPGRVESAPLYKPGFLLSRYRTV*AGSWLC
Trigger: ACACAGCCAGGACCCAGCCCACACTGTCCGATATCG...GCTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CCA 90 bp GTGTCTTTCTTGACCTTTGTGGCTGCTCTCCTGGTGACCGATCTCCTTGGGGAGGGGATGTGCGGCGGGTaGGGTCGGTTCTGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: VSFLTFVAALLVTDLLGEGMCGG*GRFCPA
Trigger: TGCAGGGCAGAACCGACCCCACCCGCCGCACATCCC...CTCCCCAAGGAGATCGGTCACCAGGAGAGCAGCCACAAAGGTCAAGAAAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp CGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCACGGCAGAACTCGACTCAGGAAAATGGCTaGGGATGTGCGGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RGRALRGGRVFQRARQNSTQENG*GCAAGG
Trigger: CCCACCCGCCGCACATCCCCAGCCATTTTCCTGAGT...CGAGTTCTGCCGTGCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp GGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCACTCAGGAAAATGGCTaGGGATGTGCGGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GFNSPGGWNLRPCTSQVSTQENG*GCAAGG
Trigger: CCCACCCGCCGCACATCCCCAGCCATTTTCCTGAGT...GGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CCA 90 bp GGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGTCCACATCGCGCCTCTaGGATGCAGCCTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GALRLSREGSERRESISESTSRL*DAAFSR
Trigger: GCGGGAGAAGGCTGCATCCCAGAGGCGCGATGTGGA...CTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp GCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCCACATCGCGCCTCTaGGATGCAGCCTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: ALTPREGGICAPVQARFPSTSRL*DAAFSR
Trigger: GCGGGAGAAGGCTGCATCCCAGAGGCGCGATGTGGA...AGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CCA 90 bp CTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGCTCTTCCTGCGGATCTTaGGCTTCTTCACCGGCCGCA +
Preference number: 4 (lower is better)
Translates to: LPGRVESAPLYKPGFLLSSSCGS*ASSPAA
Trigger: TGCGGCCGGTGAAGAAGCCCAAGATCCGCAGGAAGA...GCTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CCA 90 bp AACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGGTAAAGCTCTACCCTaGGCCAGCTGCCCCCGCACT +
Preference number: 4 (lower is better)
Translates to: NSPGGWNLRPCTSQVSFSGKALP*ASCPRT
Trigger: AGTGCGGGGGCAGCTGGCCCAGGGTAGAGCTTTACC...TGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CCA 90 bp ACCTTCCCGATGGCTGCGCCTGGCCCGTCACCTGGGCGATCTGACAAGCTTGTGTGCAGGGCTTTGGGTTaGAGCTGGCTATATGGCCAG +
Preference number: 4 (lower is better)
Translates to: TFPMAAPGPSPGRSDKLVCRALG*SWLYGQ
Trigger: CTGGCCATATAGCCAGCTCCAACCCAAAGCCCTGCA...CACAAGCTTGTCAGATCGCCCAGGTGACGGGCCAGGCGCAGCCATCGGGAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR TCA 90 bp CTTCCCTTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACACAGGACCTGGTAGTCTaGCACGGGCTCACGGTACGT +
Preference number: 4 (lower is better)
Translates to: LPLSGFNSPGGWNLRPCTQDLVV*HGLTVR
Trigger: ACGTACCGTGAGCCCGTGTCAGACTACCAGGTCCTG...TGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAAGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR TCA 90 bp GGCTGCTCTCCTGGTGACCGATCTCCTTGGGGAGCACTTGGCAGCTTAGGGCAAGTCACCTGGGCGATCTaGCAAGCTTGTGGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: GCSPGDRSPWGALGSLGQVTWAI*QACGVA
Trigger: TGCTACCCCACAAGCTTGTCAGATCGCCCAGGTGAC...TTGCCCTAAGCTGCCAAGTGCTCCCCAAGGAGATCGGTCACCAGGAGAGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp GACCCCAGAGTTCCAGAGCATTCTGTGAAGCCAGAGGAAGGCTTCAGGCGAGGCTCTGGGTTGGCTGAATaGCCTTCCCGATGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: DPRVPEHSVKPEEGFRRGSGLAE*PSRWLR
Trigger: GCGCAGCCATCGGGAAGGTCATTCAGCCAACCCAGA...GCCTCGCCTGAAGCCTTCCTCTGGCTTCACAGAATGCTCTGGAACTCTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR GCA 90 bp TCTCCTGGTGACCGATCTCCTTGGGGAGCACTTGGCAGCTTAGGGCAAAGTCTCGAGCTCACAACCACCTaGAGGGTTCTCCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: SPGDRSPWGALGSLGQSLELTTT*RVLLRA
Trigger: GGCCCGGAGGAGAACCCTGCAGGTGGTTGTGAGCTC...GAGACTTTGCCCTAAGCTGCCAAGTGCTCCCCAAGGAGATCGGTCACCAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp TCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCACGGCATGAAACGGGTAAGTaGCCGCTCCACATCGCGCCT +
Preference number: 4 (lower is better)
Translates to: SGSRGRALRGGRVFQRARHETGK*PLHIAP
Trigger: AGGCGCGATGTGGAGCGGGCACTTACCCGTTTCATG...CCGTGCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp GGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCCATGAAACGGGTAAGTaGCCGCTCCACATCGCGCCT +
Preference number: 4 (lower is better)
Translates to: GFNSPGGWNLRPCTSQVSHETGK*PLHIAP
Trigger: AGGCGCGATGTGGAGCGGGCACTTACCCGTTTCATG...GGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR GCA 90 bp AACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCACTGGGTGGCGGAGCTTaGGGTGAGCTGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: NSPGGWNLRPCTSQVSFSLGGGA*GELRLH
Trigger: GTGCAATCTCAGCTCACCGCAAGCTCCGCCACCCAG...TGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR GCA 90 bp GTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTAGCTGCCCCCGCACTTaGACCTGGGCACAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: VALTPREGGICAPVQARFSCPRT*TWAQEV
Trigger: AACTTCCTGTGCCCAGGTGCAAGTGCGGGGGCAGCT...AAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR GCA 90 bp GGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCACGGCAGAACTCGCCCTGCACCCAGGAGGCGGAGGTTaGAGTGAGCCAAGATCTTGC +
Preference number: 4 (lower is better)
Translates to: GSERRESISEGTAELALHPGGGG*SEPRSC
Trigger: GCAAGATCTTGGCTCACTGCAACCTCCGCCTCCTGG...GTGCAGGGCGAGTTCTGCCGTGCCCTCTGAAATACTCTCCCTCCTCTCAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR GCA 90 bp ACCTTCCCGATGGCTGCGCCTGGCCCGTCACCTGGGCGATCTGACAAGCTTGTGCTTGACCTTTGTGGCTaGTCTCCTGGTGACCGATCT +
Preference number: 4 (lower is better)
Translates to: TFPMAAPGPSPGRSDKLVLDLCG*SPGDRS
Trigger: AGATCGGTCACCAGGAGAGCAGCCACAAAGGTCAAG...CACAAGCTTGTCAGATCGCCCAGGTGACGGGCCAGGCGCAGCCATCGGGAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp GCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCAGAGCTCAGGAGGGATaGAGGCCTCCTCCAGACAAG +
Preference number: 4 (lower is better)
Translates to: ALRLSREGSERRESISEGRAQEG*RPPPDK
Trigger: CTTGTCTGGAGGAGGCCTGCATCCCTCCTGAGCTCT...GCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR CCA 90 bp CAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTTCACAGTGGCCTTGGGGGTCACTaGCTGATTGGTCACCGGAGG +
Preference number: 4 (lower is better)
Translates to: QMPTGGQVQPRHVVLLHSGLGGH*LIGHRR
Trigger: CCTCCGGTGACCAATCAGCCAGTGACCCCCAAGGCC...ACTGTGAAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp TCTCCTGGTGACCGATCTCCTTGGGGAGCACTTGGCAGCTTAGGGCAAAGTCTCGGCCTTGGGGGTCACTaGCTGATTGGTCACCGGAGG +
Preference number: 4 (lower is better)
Translates to: SPGDRSPWGALGSLGQSLGLGGH*LIGHRR
Trigger: CCTCCGGTGACCAATCAGCCAGTGACCCCCAAGGCC...GAGACTTTGCCCTAAGCTGCCAAGTGCTCCCCAAGGAGATCGGTCACCAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp TTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTGGCCTTGGGGGTCACTaGCTGATTGGTCACCGGAGG +
Preference number: 4 (lower is better)
Translates to: LTPREGGICAPVQARFPSGLGGH*LIGHRR
Trigger: CCTCCGGTGACCAATCAGCCAGTGACCCCCAAGGCC...AGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CCA 90 bp TTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGGGAACTCAGGAAAATaGCTGGGGATGTGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: LSGFNSPGGWNLRPCTSQGNSGK*LGMCGG
Trigger: CCCGCCGCACATCCCCAGCCATTTTCCTGAGTTCCC...CTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CCA 90 bp TTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCCACATCGCGCCTCTaGGATGCAGCCTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: FNSPGGWNLRPCTSQVSFSTSRL*DAAFSR
Trigger: GCGGGAGAAGGCTGCATCCCAGAGGCGCGATGTGGA...GAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CCA 90 bp CGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCACGGCAGAACTCGTCTTCCTGCGGATCTTaGGCTTCTTCACCGGCCGCA +
Preference number: 4 (lower is better)
Translates to: RGRALRGGRVFQRARQNSSSCGS*ASSPAA
Trigger: TGCGGCCGGTGAAGAAGCCCAAGATCCGCAGGAAGA...CGAGTTCTGCCGTGCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp GTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTAACTCCCCGGGAGGGTaGAATCTGCGCCCCTGTACA +
Preference number: 4 (lower is better)
Translates to: VALTPREGGICAPVQARFNSPGG*NLRPCT
Trigger: TGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTT...AAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CCA 90 bp CAGGAGGAGAGTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGCAAAGCTGTGCTGTGTaGCCTCCTGTTTCCGACACG +
Preference number: 4 (lower is better)
Translates to: QEESAAPLQGAFVKCRREQSCAV*PPVSDT
Trigger: CGTGTCGGAAACAGGAGGCCACACAGCACAGCTTTG...CTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCACTCTCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp CGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAGCCCCGACACAAAGCTGTGCTGTGTaGCCTCCTGTTTCCGACACG +
Preference number: 4 (lower is better)
Translates to: RFRELSSNADGRTGAAPTQSCAV*PPVSDT
Trigger: CGTGTCGGAAACAGGAGGCCACACAGCACAGCTTTG...TGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp CGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCACGGCAGAACTCGCGAGGCCACAAGACATaGTGCACTCAGGCTCTCGAG +
Preference number: 4 (lower is better)
Translates to: RGRALRGGRVFQRARQNSRGHKT*CTQALE
Trigger: CTCGAGAGCCTGAGTGCACCATGTCTTGTGGCCTCG...CGAGTTCTGCCGTGCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp ATCTCTCAGGAGGAGAGTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGATTGGGGGTCACTGGCTaGTTGGTCACCGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: ISQEESAAPLQGAFVKCRLGVTG*LVTGGA
Trigger: TGCTCCTCCGGTGACCAATCAGCCAGTGACCCCCAA...TCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCACTCTCCTCCTGAGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp ATCTCTCAGGAGGAGAGTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACAGGACCTGGTAGTCTaGCACGGGCTCACGGTACGT +
Preference number: 4 (lower is better)
Translates to: ISQEESAAPLQGAFVKCRQDLVV*HGLTVR
Trigger: ACGTACCGTGAGCCCGTGTCAGACTACCAGGTCCTG...TCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCACTCTCCTCCTGAGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp TGCTCTCCTGGTGACCGATCTCCTTGGGGAGCACTTGGCAGCTTAGGGCAAAGTCAGGACCTGGTAGTCTaGCACGGGCTCACGGTACGT +
Preference number: 4 (lower is better)
Translates to: CSPGDRSPWGALGSLGQSQDLVV*HGLTVR
Trigger: ACGTACCGTGAGCCCGTGTCAGACTACCAGGTCCTG...ACTTTGCCCTAAGCTGCCAAGTGCTCCCCAAGGAGATCGGTCACCAGGAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp GAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTGCTCAAGACTCCTaGCTCCTGCCCACCCCAAAC +
Preference number: 4 (lower is better)
Translates to: ELSSNADGRTGAAPTCRSSAQDS*LLPTPN
Trigger: GTTTGGGGTGGGCAGGAGTCAGGAGTCTTGAGCAGA...AGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp GAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTCCCTGGCCAACCTGGTaGAACCCCGTCTCTACCAAA +
Preference number: 4 (lower is better)
Translates to: ELSSNADGRTGAAPTCRSPWPTW*NPVSTK
Trigger: TTTGGTAGAGACGGGGTTTCACCAGGTTGGCCAGGG...AGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp ACAAGACATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTAGGCGGAGGTTGCAGTaGGCCAAGATCTTGCCACTG +
Preference number: 4 (lower is better)
Translates to: TRHGALRLSREGSERRESRRRLQ*AKILPL
Trigger: CAGTGGCAAGATCTTGGCTCACTGCAACCTCCGCCT...ACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATGTCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR TCA 90 bp TCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCACGGCAGAACGTCACCTGGGCGATCTaGCAAGCTTGTGGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: SRGRALRGGRVFQRARQNVTWAI*QACGVA
Trigger: TGCTACCCCACAAGCTTGTCAGATCGCCCAGGTGAC...GTTCTGCCGTGCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp GCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTAACAGTAACAAGAGGTaGCCGCGAGGAGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: ALTPREGGICAPVQARFPNSNKR*PRGEEG
Trigger: GCCCTCCTCTCCTCGCGGTCACCTCTTGTTACTGTT...AGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465926.5
CDS-3UTR GCA 90 bp AGACAAGCTGAGGACACACTCCCTGACCAGACCCCAGAGTTCCAGAGCATTCTGATCGCGCCTCTGGGATaGAGCCTTCTCCCGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RQAEDTLPDQTPEFQSILIAPLG*SLLPQD
Trigger: GTCCTGCGGGAGAAGGCTGCATCCCAGAGGCGCGAT...CAGAATGCTCTGGAACTCTGGGGTCTGGTCAGGGAGTGTGTCCTCAGCTTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR GCA 90 bp GGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCAAGGAGGGGTTCTGCTaGAGGACAGAGGTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GFNSPGGWNLRPCTSQVSKEGFC*RTEVFS
Trigger: GGAGAACACCTCTGTCCTGCAGCAGAACCCCTCCTT...GGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR GCA 90 bp ACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGGAAGTCACTGGCTGCTaGTATGCCCCACCACATAGC +
Preference number: 4 (lower is better)
Translates to: TPREGGICAPVQARFPSQEVTGC*YAPPHS
Trigger: GCTATGTGGTGGGGCATAGCAGCAGCCAGTGACTTC...CTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp CGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAGCCCCGACAAAGACTCCTGACTCCTaGCCACCCCAAACAAAGCTG +
Preference number: 4 (lower is better)
Translates to: RFRELSSNADGRTGAAPTKTPDS*PPQTKL
Trigger: CAGCTTTGTTTGGGGTGGGCAGGAGTCAGGAGTCTT...TGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp AACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCATCAGGAGGAGAGTGCTaGCCCGCTTCAGGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: NSPGGWNLRPCTSQVSFSSGGEC*PASGSF
Trigger: AAAGCTCCCTGAAGCGGGGCAGCACTCTCCTCCTGA...TGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp AGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTCCAGGAGGCGGAGGTTaGAGTGAGCCAAGATCTTGC +
Preference number: 4 (lower is better)
Translates to: SGFNSPGGWNLRPCTSQVPGGGG*SEPRSC
Trigger: GCAAGATCTTGGCTCACTGCAACCTCCGCCTCCTGG...AACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494547.5
CDS-3UTR CCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTCACCGGCCCCAGCTGTaGCCGCCGCGTCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQAHRPQL*PPRRPS
Trigger: AGATGGCCGACGCGGCGGCCACAGCTGGGGCCGGTG...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR CCA 90 bp GACATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTGGGAACTCAGGAAAATaGCTGGGGATGTGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: DMVHSGSRGRALRGGRVFGNSGK*LGMCGG
Trigger: CCCGCCGCACATCCCCAGCCATTTTCCTGAGTTCCC...AAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp CAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTTCACAGTGGGAACTCAGGAAAATaGCTGGGGATGTGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: QMPTGGQVQPRHVVLLHSGNSGK*LGMCGG
Trigger: CCCGCCGCACATCCCCAGCCATTTTCCTGAGTTCCC...ACTGTGAAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp ACAAGACATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTTCTTCCTGCGGATCTTaGGCTTCTTCACCGGCCGCA +
Preference number: 4 (lower is better)
Translates to: TRHGALRLSREGSERRESSSCGS*ASSPAA
Trigger: TGCGGCCGGTGAAGAAGCCCAAGATCCGCAGGAAGA...ACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATGTCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp CTTCCCTTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACATCTTCCTGCGGATCTTaGGCTTCTTCACCGGCCGCA +
Preference number: 4 (lower is better)
Translates to: LPLSGFNSPGGWNLRPCTSSCGS*ASSPAA
Trigger: TGCGGCCGGTGAAGAAGCCCAAGATCCGCAGGAAGA...TGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAAGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR TCA 90 bp CAGGAGGAGAGTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGCCATCTCAACAAGTGTaGCCACGATATCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: QEESAAPLQGAFVKCRREPSQQV*PRYRTV
Trigger: CACTGTCCGATATCGTGGTCACACTTGTTGAGATGG...CTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCACTCTCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp GGCACTGTGCAGGGCTTTGGGTTGGAGCTGGCTATATGGCCAGGCCCTGTGAGGCCATCTCAACAAGTGTaGCCACGATATCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: GTVQGFGLELAIWPGPVRPSQQV*PRYRTV
Trigger: CACTGTCCGATATCGTGGTCACACTTGTTGAGATGG...CCTCACAGGGCCTGGCCATATAGCCAGCTCCAACCCAAAGCCCTGCACAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR TCA 90 bp CTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGCCCATCTCAACAAGTGTaGCCACGATATCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: LPGRVESAPLYKPGFLLSPSQQV*PRYRTV
Trigger: CACTGTCCGATATCGTGGTCACACTTGTTGAGATGG...GCTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR TCA 90 bp CTGCGCCTGGCCCGTCACCTGGGCGATCTGACAAGCTTGTGGGGTAGCATCTGCGGAGAGTGTCCACATTaGAACCCATCTCAACAAGTG +
Preference number: 4 (lower is better)
Translates to: LRLARHLGDLTSLWGSICGECPH*NPSQQV
Trigger: CACTTGTTGAGATGGGTTTCAATGTGGACACTCTCC...GCAGATGCTACCCCACAAGCTTGTCAGATCGCCCAGGTGACGGGCCAGGCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp CTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGCTCTTTGAAAAGACTCTaGGTCTCGCCTGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LPGRVESAPLYKPGFLLSSLKRL*VSPVLA
Trigger: GGCCAAGACAGGCGAGACTCAGAGTCTTTTCAAAGA...GCTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR TCA 90 bp GAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTACCCTCTTCTTCCCTTaGGTGGCTTTAACTCCCCGG +
Preference number: 4 (lower is better)
Translates to: ELSSNADGRTGAAPTCRSTLFFP*VALTPR
Trigger: CCGGGGAGTTAAAGCCACTCAAGGGAAGAAGAGGGT...AGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp CTTCCCTTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAACCCTCTTCTTCCCTTaGGTGGCTTTAACTCCCCGG +
Preference number: 4 (lower is better)
Translates to: LPLSGFNSPGGWNLRPCTTLFFP*VALTPR
Trigger: CCGGGGAGTTAAAGCCACTCAAGGGAAGAAGAGGGT...TGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR TCA 90 bp GGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTTCACAGTGATGCATCTGCTGCCTCGGCTTGGCCATaGGGAGGTCACCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GGQVQPRHVVLLHSDASAASAWP*GGHPLL
Trigger: AAGAAGAGGGTGACCTCCTCATGGCCAAGCCGAGGC...AGCAGATGCATCACTGTGAAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp TTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTTGGACCCAGGGTTGCTaGGACTGCAGTGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LTPREGGICAPVQARFPSWTQGC*DCSELR
Trigger: TCTCAGCTCACTGCAGTCTCAGCAACCCTGGGTCCA...AGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp GTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAGTAATCAAATGGAGATaGGGTAGGCCACACGCTCCA +
Preference number: 4 (lower is better)
Translates to: VLPRFRELSSNADGRTGAVIKWR*GRPHAP
Trigger: TGGAGCGTGTGGCCTACCTCATCTCCATTTGATTAC...TGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp CAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTTCACAGTAGGCGGAGGTTGCAGTaGGCCAAGATCTTGCCACTG +
Preference number: 4 (lower is better)
Translates to: QMPTGGQVQPRHVVLLHSRRRLQ*AKILPL
Trigger: CAGTGGCAAGATCTTGGCTCACTGCAACCTCCGCCT...ACTGTGAAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494547.5
CDS-3UTR TCA 90 bp GGTTTGCTTCCGTGTGTGTCTTTCTTGACCTTTGTGGCTGCTCTCCTGGTGACCTGGCTGCTCTCCTGGTaGCCGATCTCCTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GLLPCVSFLTFVAALLVTWLLSW*PISLGS
Trigger: GCTCCCCAAGGAGATCGGTCACCAGGAGAGCAGCCA...GGTCACCAGGAGAGCAGCCACAAAGGTCAAGAAAGACACACACGGAAGCAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp GCCAGAGGAAGGCTTCAGGCGAGGCCACAAGACATGGTGCACTCAGGCTCTCGACGTGTGTGTCTTTCTTaGCCTTTGTGGCTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: ARGRLQARPQDMVHSGSRRVCLS*PLWLLS
Trigger: GGAGAGCAGCCACAAAGGTCAAGAAAGACACACACG...TCGAGAGCCTGAGTGCACCATGTCTTGTGGCCTCGCCTGAAGCCTTCCTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR TCA 90 bp GGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGTCGCCCTGCACTTCTTaGGGACAGGGTCTACATCCT +
Preference number: 4 (lower is better)
Translates to: GALRLSREGSERRESISESPCTS*GQGLHP
Trigger: AGGATGTAGACCCTGTCCTCAAGAAGTGCAGGGCGA...CTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp GGCACTGTGCAGGGCTTTGGGTTGGAGCTGGCTATATGGCCAGGCCCTGTGAGGCCTCTGAGACCGTTTTaGATAAGCAGGGAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: GTVQGFGLELAIWPGPVRPLRPF*ISRESV
Trigger: GACACTCTCCCTGCTTATGCAAAACGGTCTCAGAGG...CCTCACAGGGCCTGGCCATATAGCCAGCTCCAACCCAAAGCCCTGCACAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR GCA 90 bp CTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGCAGAGGGACTTCTTCCTaGGGATCTTGGGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LPGRVESAPLYKPGFLLSRGTSS*GSWASS
Trigger: TGAAGAAGCCCAAGATCCGCAGGAAGAAGTCCCTCT...GCTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR GCA 90 bp TTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCGGAGCTTTCGTCAAATaGCGACGGGAGGACAGGTGC +
Preference number: 4 (lower is better)
Translates to: FNSPGGWNLRPCTSQVSFGAFVK*RREDRC
Trigger: GCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTCC...GAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp ATCTCTCAGGAGGAGAGTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACTTCGCCTCCCGAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: ISQEESAAPLQGAFVKCRLRLPK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTCGGGAGGCGAAG...TCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCACTCTCCTCCTGAGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR GCA 90 bp GCCACTGCGCGTAGCCCCTCTTTCCTACTGTTTAAACCCCATGGCTCCTCTGTCGCAGTGGGCCAAGATTaGACCATTGCACTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: ATARSPSFLLFKPHGSSVAVGQD*TIALQR
Trigger: GCGCTGGAGTGCAATGGTGCAATCTTGGCCCACTGC...GACAGAGGAGCCATGGGGTTTAAACAGTAGGAAAGAGGGGCTACGCGCAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR GCA 90 bp GTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAGAACAGAGTAGTGGCTaGCAGGAGAGAAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: VLPRFRELSSNADGRTGAEQSSG*QERSGR
Trigger: TCTTCCACTTCTCTCCTGGCAGCCACTACTCTGTTC...TGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR GCA 90 bp ATGACCTTCCCGATGGCTGCGCCTGGCCCGTCACCTGGGCGATCTGACAAGCTTCACAGAGCCTGGGTTTaGTTCCGTGTGTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: MTFPMAAPGPSPGRSDKLHRAWV*FRVCLS
Trigger: AGAAAGACACACACGGAAGCAAACCCAGGCTCTGTG...AAGCTTGTCAGATCGCCCAGGTGACGGGCCAGGCGCAGCCATCGGGAAGGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp GGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGTTGTGGGGTAGCATCTaGACCAGCAAGGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GALRLSREGSERRESISELWGSI*TSKGWK
Trigger: CTTCCAGCCCTTGCTGGTGCAGATGCTACCCCACAA...CTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp TCTCCTGGTGACCGATCTCCTTGGGGAGCACTTGGCAGCTTAGGGCAAAGTCTCGGCCACAAGACATGGTaGACTCAGGCTCTCGAGGGA +
Preference number: 4 (lower is better)
Translates to: SPGDRSPWGALGSLGQSLGHKTW*TQALEG
Trigger: TCCCTCGAGAGCCTGAGTGCACCATGTCTTGTGGCC...GAGACTTTGCCCTAAGCTGCCAAGTGCTCCCCAAGGAGATCGGTCACCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp TCTCCTGGTGACCGATCTCCTTGGGGAGCACTTGGCAGCTTAGGGCAAAGTCTCCGATATCGGACAGTGTaGGCTGGGTCCTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SPGDRSPWGALGSLGQSLRYRTV*AGSWLC
Trigger: ACACAGCCAGGACCCAGCCCACACTGTCCGATATCG...GAGACTTTGCCCTAAGCTGCCAAGTGCTCCCCAAGGAGATCGGTCACCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp GCCACTGCGCGTAGCCCCTCTTTCCTACTGTTTAAACCCCATGGCTCCTCTGTCTCTTCCTGCGGATCTTaGGCTTCTTCACCGGCCGCA +
Preference number: 4 (lower is better)
Translates to: ATARSPSFLLFKPHGSSVSSCGS*ASSPAA
Trigger: TGCGGCCGGTGAAGAAGCCCAAGATCCGCAGGAAGA...GACAGAGGAGCCATGGGGTTTAAACAGTAGGAAAGAGGGGCTACGCGCAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp GGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTTCACAGTGATGCATCTGCTAACTCCCCGGGAGGGTaGAATCTGCGCCCCTGTACA +
Preference number: 4 (lower is better)
Translates to: GGQVQPRHVVLLHSDASANSPGG*NLRPCT
Trigger: TGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTT...AGCAGATGCATCACTGTGAAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp GCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTGAGAACAGCTGGGATTaGCCACGGCTTGAATGTGGG +
Preference number: 4 (lower is better)
Translates to: ALTPREGGICAPVQARFPENSWD*PRLECG
Trigger: CCCACATTCAAGCCGTGGCCAATCCCAGCTGTTCTC...AGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CCA 90 bp GGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGTGACCGATCTCCTTaGGGAGCACTTGGCAGCTTA +
Preference number: 4 (lower is better)
Translates to: GALRLSREGSERRESISEGDRSP*GALGSL
Trigger: TAAGCTGCCAAGTGCTCCCCAAGGAGATCGGTCACC...CTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp ACAAGACATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTTTGGAGCTGGCTATATaGCCAGGCCCTGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: TRHGALRLSREGSERRESLELAI*PGPVRR
Trigger: TCTCCTCACAGGGCCTGGCCATATAGCCAGCTCCAA...ACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATGTCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR CCA 90 bp GGAGAGTATTTCAGAGGGCACGGCAGAACTCGCCCTGCACTTCTTGAGGACAGGGCTTTGGGTTGGAGCTaGCTATATGGCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GEYFRGHGRTRPALLEDRALGWS*LYGQAL
Trigger: CAGGGCCTGGCCATATAGCCAGCTCCAACCCAAAGC...CCTGTCCTCAAGAAGTGCAGGGCGAGTTCTGCCGTGCCCTCTGAAATACTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372982.8
3UTR CAA 72 bp GCGGGCATCTGTAATCCCAGCTACTCTGAGAATTGCTaGAACCCGGGGAGTGGAGGTTGCAGTGAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: AGICNPSYSENC*NPGSGGCSEPR
Trigger: CCTCGGCTCACTGCAACCTCCACTCCCCGGGTTCAAGCAATTCTCAGAGTAGCTGGGATTACAGATGCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp GCCACAAGACATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGGGAGAGTGTCCACATTaGAACCCATCTCAACAAGTG +
Preference number: 4 (lower is better)
Translates to: ATRHGALRLSREGSERREGECPH*NPSQQV
Trigger: CACTTGTTGAGATGGGTTTCAATGTGGACACTCTCC...CTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATGTCTTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp AACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGGTACGTCGGAGTTTTaGTGTAGGTGTGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: NSPGGWNLRPCTSQVSFSGTSEF*CRCGDQ
Trigger: CTGATCCCCACACCTACATCAAAACTCCGACGTACC...TGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR TCA 90 bp CCCTTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCCTTACACAGTACAGTaGGGCCAGAAGAACATGGAG +
Preference number: 4 (lower is better)
Translates to: PLSGFNSPGGWNLRPCTSPYTVQ*GQKNME
Trigger: CTCCATGTTCTTCTGGCCTCACTGTACTGTGTAAGG...GCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp GAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTCCCCTCTTCCGTTCCTaGCAAGCAGCTCTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: ELSSNADGRTGAAPTCRSPLFRS*QAALSL
Trigger: TAAGGAAAGAGCTGCTTGTCAGGAACGGAAGAGGGG...AGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp AGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTCTGAATCACAAACCCTaGGAAGGCCACATAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SGFNSPGGWNLRPCTSQVLNHKP*EGHIGQ
Trigger: CTGGCCTATGTGGCCTTCTCAGGGTTTGTGATTCAG...AACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp GAGCTGAGATTGCACCACTGCAATCTTGACAATCCACTGCAATCCAGCCTGGGCGGCAGGAGAATCTCTTaGACCCGGGAGGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ELRLHHCNLDNPLQSSLGGRRIS*TREVEE
Trigger: CTCCTCCACCTCCCGGGTTCAAGAGATTCTCCTGCC...GCCCAGGCTGGATTGCAGTGGATTGTCAAGATTGCAGTGGTGCAATCTCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp TCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCACGGCAGAACCGTGTGTGTCTTTCTTaGCCTTTGTGGCTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SRGRALRGGRVFQRARQNRVCLS*PLWLLS
Trigger: GGAGAGCAGCCACAAAGGTCAAGAAAGACACACACG...GTTCTGCCGTGCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp CATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAATCCTCTGGGTTGGCTaGATGACCTTCCCGATGGCT +
Preference number: 4 (lower is better)
Translates to: HGALRLSREGSERRESISILWVG*MTFPMA
Trigger: AGCCATCGGGAAGGTCATTCAGCCAACCCAGAGGAT...TGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp GAGGGAGAGTATTTCAGAGGGCACGGCAGAACTCGCCCTGCACTTCTTGAGGACATCCTCTGGGTTGGCTaGATGACCTTCCCGATGGCT +
Preference number: 4 (lower is better)
Translates to: EGEYFRGHGRTRPALLEDILWVG*MTFPMA
Trigger: AGCCATCGGGAAGGTCATTCAGCCAACCCAGAGGAT...GTCCTCAAGAAGTGCAGGGCGAGTTCTGCCGTGCCCTCTGAAATACTCTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp CCCTTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGCGTTTCCACGGATaGTTTCTCGGCACTCTCAAA +
Preference number: 4 (lower is better)
Translates to: PLSGFNSPGGWNLRPCTSQRFHG*FLGTLK
Trigger: TTTGAGAGTGCCGAGAAAGCATCCGTGGAAACGCTG...GCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR GCA 90 bp AGACAAGCTGAGGACACACTCCCTGACCAGACCCCAGAGTTCCAGAGCATTCTGCATGAAACGGGTAAGTaGCCGCTCCACATCGCGCCT +
Preference number: 4 (lower is better)
Translates to: RQAEDTLPDQTPEFQSILHETGK*PLHIAP
Trigger: AGGCGCGATGTGGAGCGGGCACTTACCCGTTTCATG...CAGAATGCTCTGGAACTCTGGGGTCTGGTCAGGGAGTGTGTCCTCAGCTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR GCA 90 bp TTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTAAGGAGGGGTTCTGCTaGAGGACAGAGGTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LTPREGGICAPVQARFPSKEGFC*RTEVFS
Trigger: GGAGAACACCTCTGTCCTGCAGCAGAACCCCTCCTT...AGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR GCA 90 bp ATGCATCTGCTCAAGACTCCTGACTCCTGCCCACCCCAAACAAAGCTGTGCTGTTGTCCGATCACACCCTaGAGCCTCGGCTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: MHLLKTPDSCPPQTKLCCCPITP*SLGLAM
Trigger: CATGGCCAAGCCGAGGCTGCAGGGTGTGATCGGACA...ACAGCACAGCTTTGTTTGGGGTGGGCAGGAGTCAGGAGTCTTGAGCAGATGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp GCCACTGCGCGTAGCCCCTCTTTCCTACTGTTTAAACCCCATGGCTCCTCTGTCGAAGTCACTGGCTGCTaGTATGCCCCACCACATAGC +
Preference number: 4 (lower is better)
Translates to: ATARSPSFLLFKPHGSSVEVTGC*YAPPHS
Trigger: GCTATGTGGTGGGGCATAGCAGCAGCCAGTGACTTC...GACAGAGGAGCCATGGGGTTTAAACAGTAGGAAAGAGGGGCTACGCGCAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp AACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCACTAAGTTCCCAGGTGTaGTTAGGCCAACACAAGGGC +
Preference number: 4 (lower is better)
Translates to: NSPGGWNLRPCTSQVSFSLSSQV*LGQHKG
Trigger: GCCCTTGTGTTGGCCTAAGCACACCTGGGAACTTAG...TGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTGGGATGTGCGGCGGGTaGGGTCGGTTCTGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQAGMCGG*GRFCPA
Trigger: TGCAGGGCAGAACCGACCCCACCCGCCGCACATCCC...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR CCA 90 bp TCCAGAAGGGGTAAGACTTGGCAGTTCCCAAGCACACATTCCTCACAGGGGCAAGGGAACTCAGGAAAATaGCTGGGGATGTGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: SRRGKTWQFPSTHSSQGQGNSGK*LGMCGG
Trigger: CCCGCCGCACATCCCCAGCCATTTTCCTGAGTTCCC...TTGCCCCTGTGAGGAATGTGTGCTTGGGAACTGCCAAGTCTTACCCCTTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp AGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTAATGAACGAAGTCACTaGCTGCTGCTATGCCCCACC +
Preference number: 4 (lower is better)
Translates to: SGFNSPGGWNLRPCTSQVNERSH*LLLCPT
Trigger: GGTGGGGCATAGCAGCAGCCAGTGACTTCGTTCATT...AACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp CCGTGTGTGTCTTTCTTGACCTTTGTGGCTGCTCTCCTGGTGACCGATCTCCTTTGCACCAGCAAGGGCTaGAAGGAGCACAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PCVSFLTFVAALLVTDLLCTSKG*KEHRAW
Trigger: CCAGGCTCTGTGCTCCTTCCAGCCCTTGCTGGTGCA...AAGGAGATCGGTCACCAGGAGAGCAGCCACAAAGGTCAAGAAAGACACACACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTGGTTCTGCCCTGCAGTaGGGGCCTTGGGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQAGSALQ*GPWGSL
Trigger: CAGTGACCCCCAAGGCCCTCACTGCAGGGCAGAACC...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR TCA 90 bp GAGAGTATTTCAGAGGGCACGGCAGAACTCGCCCTGCACTTCTTGAGGACAGGGGGTACGTCGGAGTTTTaGTGTAGGTGTGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: ESISEGTAELALHFLRTGGTSEF*CRCGDQ
Trigger: CTGATCCCCACACCTACATCAAAACTCCGACGTACC...CCCTGTCCTCAAGAAGTGCAGGGCGAGTTCTGCCGTGCCCTCTGAAATACTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp GCCACTGCGCGTAGCCCCTCTTTCCTACTGTTTAAACCCCATGGCTCCTCTGTCGGTACGTCGGAGTTTTaGTGTAGGTGTGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: ATARSPSFLLFKPHGSSVGTSEF*CRCGDQ
Trigger: CTGATCCCCACACCTACATCAAAACTCCGACGTACC...GACAGAGGAGCCATGGGGTTTAAACAGTAGGAAAGAGGGGCTACGCGCAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp GACCCCAGAGTTCCAGAGCATTCTGTGAAGCCAGAGGAAGGCTTCAGGCGAGGCTCTTTGAAAAGACTCTaGGTCTCGCCTGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: DPRVPEHSVKPEEGFRRGSLKRL*VSPVLA
Trigger: GGCCAAGACAGGCGAGACTCAGAGTCTTTTCAAAGA...GCCTCGCCTGAAGCCTTCCTCTGGCTTCACAGAATGCTCTGGAACTCTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR TCA 90 bp ACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGTCCTCCATGCTGATATaGAGAGCAAGGTTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TPREGGICAPVQARFPSQSSMLI*RARFSV
Trigger: CACAGAGAACCTTGCTCTTCATATCAGCATGGAGGA...CTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000465926.5
CDS-3UTR TCA 90 bp ACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGGATAAGGGTTATCGATaGTGTTCTCCTCCCCATTCC +
Preference number: 4 (lower is better)
Translates to: TPREGGICAPVQARFPSQDKGYR*CSPPHS
Trigger: GGAATGGGGAGGAGAACATCATCGATAACCCTTATC...CTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR TCA 90 bp TTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTAGGCGGGTTATCACTTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: LTPREGGICAPVQARFPSRRVIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAAGTGATAACCCGCCT...AGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp CAGGAGGAGAGTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGCCCCACCACATAGCCTaGTTGATTAAGAAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: QEESAAPLQGAFVKCRREPHHIA*LIKKVS
Trigger: AGAGACTTTCTTAATCAATCAGGCTATGTGGTGGGG...CTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCACTCTCCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp GTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCACTGTTTCCGACACGTTaGGGGAGTACAAAGAACTTT +
Preference number: 4 (lower is better)
Translates to: VLPRFRELSSNADGRTGALFPTR*GSTKNF
Trigger: AAAGTTCTTTGTACTCCCTCAACGTGTCGGAAACAG...TGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp TCCAGAAGGGGTAAGACTTGGCAGTTCCCAAGCACACATTCCTCACAGGGGCAACACCAGCCTTCCAGCTaGCCAGCCGTTTCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SRRGKTWQFPSTHSSQGQHQPSS*PAVSQL
Trigger: AAGCTGAGAAACGGCTGGTCAGCTGGAAGGCTGGTG...TTGCCCCTGTGAGGAATGTGTGCTTGGGAACTGCCAAGTCTTACCCCTTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp TTTCGTCAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTTGGATTGGCCACGGCTTaGATGTGGGGCTGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: FRQMPTGGQVQPRHVVLLGLATA*MWGCVH
Trigger: ATGAACACAGCCCCACATTCAAGCCGTGGCCAATCC...AAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp AACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGGCAGTAGAATCATTTaGACCCGGGAGGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: NSPGGWNLRPCTSQVSFSGSRII*TREAEV
Trigger: AACTTCTGCCTCCCGGGTTCAAATGATTCTACTGCC...TGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR GCA 90 bp GAAGGGGTAAGACTTGGCAGTTCCCAAGCACACATTCCTCACAGGGGCAATAAAGAGCTCACAACCACCTaGAGGGTTCTCCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: EGVRLGSSQAHIPHRGNKELTTT*RVLLRA
Trigger: GGCCCGGAGGAGAACCCTGCAGGTGGTTGTGAGCTC...TTTATTGCCCCTGTGAGGAATGTGTGCTTGGGAACTGCCAAGTCTTACCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp GCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTCAGCGTTTCCACGGATaGTTTCTCGGCACTCTCAAA +
Preference number: 4 (lower is better)
Translates to: ALTPREGGICAPVQARFPQRFHG*FLGTLK
Trigger: TTTGAGAGTGCCGAGAAAGCATCCGTGGAAACGCTG...AGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR GCA 90 bp AACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCACCTCTGAGACCGTTTTaGATAAGCAGGGAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: NSPGGWNLRPCTSQVSFSPLRPF*ISRESV
Trigger: GACACTCTCCCTGCTTATGCAAAACGGTCTCAGAGG...TGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR GCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTGGGTCGGTTCTGCCCTaGAGTGAGGGCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQAGSVLP*SEGLGG
Trigger: ACCCCCAAGGCCCTCACTGCAGGGCAGAACCGACCC...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR GCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTGGGTGGGGTCGGTTCTaGCCTGCAGTGAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQAGWGRF*PAVRAL
Trigger: CAAGGCCCTCACTGCAGGGCAGAACCGACCCCACCC...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR GCA 90 bp TCCAGAAGGGGTAAGACTTGGCAGTTCCCAAGCACACATTCCTCACAGGGGCAACATGAAACGGGTAAGTaGCCGCTCCACATCGCGCCT +
Preference number: 4 (lower is better)
Translates to: SRRGKTWQFPSTHSSQGQHETGK*PLHIAP
Trigger: AGGCGCGATGTGGAGCGGGCACTTACCCGTTTCATG...TTGCCCCTGTGAGGAATGTGTGCTTGGGAACTGCCAAGTCTTACCCCTTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp GAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTAGAGGGACTTCTTCCTaGGGATCTTGGGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: ELSSNADGRTGAAPTCRSRGTSS*GSWASS
Trigger: TGAAGAAGCCCAAGATCCGCAGGAAGAAGTCCCTCT...AGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp CAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTTCACAGTAACGAAGTCACTGGCTaGTGCTATGCCCCACCACAT +
Preference number: 4 (lower is better)
Translates to: QMPTGGQVQPRHVVLLHSNEVTG*CYAPPH
Trigger: ATGTGGTGGGGCATAGCAGCAGCCAGTGACTTCGTT...ACTGTGAAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp CTTTCCTACTGTTTAAACCCCATGGCTCCTCTGTCAAGTCCCAGCATAATAGAGCTACCCTGGGCCAGCTaGCCCCGCACTTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: LSYCLNPMAPLSSPSIIELPWAS*PRTCTW
Trigger: CCAGGTGCAAGTGCGGGGGCAGCTGGCCCAGGGTAG...CTCTATTATGCTGGGACTTGACAGAGGAGCCATGGGGTTTAAACAGTAGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR GCA 90 bp CCAGCAAGGGCTGGAAGGAGCACAGAGCCTGGGTTTGCTTCCGTGTGTGTCTTTCTTGACCTTTGTGGCTaGTCTCCTGGTGACCGATCT +
Preference number: 4 (lower is better)
Translates to: PARAGRSTEPGFASVCVFLDLCG*SPGDRS
Trigger: AGATCGGTCACCAGGAGAGCAGCCACAAAGGTCAAG...AAAGACACACACGGAAGCAAACCCAGGCTCTGTGCTCCTTCCAGCCCTTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp GCCACAAGACATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGGCTCACAGTAAGACTTaGCACTTCTCCCAATTTCTG +
Preference number: 4 (lower is better)
Translates to: ATRHGALRLSREGSERREAHSKT*HFSQFL
Trigger: CAGAAATTGGGAGAAGTGCCAAGTCTTACTGTGAGC...CTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATGTCTTGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp GGTTTGCTTCCGTGTGTGTCTTTCTTGACCTTTGTGGCTGCTCTCCTGGTGACCCGATATCGGACAGTGTaGGCTGGGTCCTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GLLPCVSFLTFVAALLVTRYRTV*AGSWLC
Trigger: ACACAGCCAGGACCCAGCCCACACTGTCCGATATCG...GGTCACCAGGAGAGCAGCCACAAAGGTCAAGAAAGACACACACGGAAGCAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp TTCTTCACAGTGATGCATCTGCTCAAGACTCCTGACTCCTGCCCACCCCAAACAACTCAGGAAAATGGCTaGGGATGTGCGGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: FFTVMHLLKTPDSCPPQTTQENG*GCAAGG
Trigger: CCCACCCGCCGCACATCCCCAGCCATTTTCCTGAGT...TGTTTGGGGTGGGCAGGAGTCAGGAGTCTTGAGCAGATGCATCACTGTGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp CTGTTTAAACCCCATGGCTCCTCTGTCAAGTCCCAGCATAATAGAGCCGACGCTAACTCCCCGGGAGGGTaGAATCTGCGCCCCTGTACA +
Preference number: 4 (lower is better)
Translates to: LFKPHGSSVKSQHNRADANSPGG*NLRPCT
Trigger: TGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTT...AGCGTCGGCTCTATTATGCTGGGACTTGACAGAGGAGCCATGGGGTTTAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp TTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCGTAATCGCAACTCTTTaGGAGGCCAATGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: FNSPGGWNLRPCTSQVSFVIATL*EANAGG
Trigger: TCCACCCGCATTGGCCTCCCAAAGAGTTGCGATTAC...GAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp CTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGCCCACAGGATACAAATTaGTTGGACAGACTCAGACCT +
Preference number: 4 (lower is better)
Translates to: LPGRVESAPLYKPGFLLSPQDTN*LDRLRP
Trigger: AGGTCTGAGTCTGTCCAACCAATTTGTATCCTGTGG...GCTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CCA 90 bp GAGAGTATTTCAGAGGGCACGGCAGAACTCGCCCTGCACTTCTTGAGGACAGGGAAGGAGCACAGAGCCTaGGTTTGCTTCCGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: ESISEGTAELALHFLRTGKEHRA*VCFRVC
Trigger: ACACACACGGAAGCAAACCCAGGCTCTGTGCTCCTT...CCCTGTCCTCAAGAAGTGCAGGGCGAGTTCTGCCGTGCCCTCTGAAATACTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp TTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGGAGAGTGTCCACATTaGAACCCATCTCAACAAGTG +
Preference number: 4 (lower is better)
Translates to: LSGFNSPGGWNLRPCTSQGECPH*NPSQQV
Trigger: CACTTGTTGAGATGGGTTTCAATGTGGACACTCTCC...CTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR TCA 90 bp GCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCCTCCATGCTGATATaGAGAGCAAGGTTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: ALTPREGGICAPVQARFPSSMLI*RARFSV
Trigger: CACAGAGAACCTTGCTCTTCATATCAGCATGGAGGA...AGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000465926.5
CDS-3UTR TCA 90 bp GCCGACGCTCTAGGCTCTTGTCAGAGAAAACCTCTTCTTCCAGAAGGGGTAAGATGGACCCAGGGTTGCTaGGACTGCAGTGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: ADALGSCQRKPLLPEGVRWTQGC*DCSELR
Trigger: TCTCAGCTCACTGCAGTCTCAGCAACCCTGGGTCCA...TCTTACCCCTTCTGGAAGAAGAGGTTTTCTCTGACAAGAGCCTAGAGCGTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp TTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCGCACCACTGCAATCTTaGCAATCCACTGCAATCCAG +
Preference number: 4 (lower is better)
Translates to: FNSPGGWNLRPCTSQVSFAPLQS*QSTAIQ
Trigger: CTGGATTGCAGTGGATTGTCAAGATTGCAGTGGTGC...GAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR GCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTGAGCTCACAACCACCTaGAGGGTTCTCCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQAELTTT*RVLLRA
Trigger: GGCCCGGAGGAGAACCCTGCAGGTGGTTGTGAGCTC...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR GCA 90 bp CATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCACAGCGTTTCCACGGATaGTTTCTCGGCACTCTCAAA +
Preference number: 4 (lower is better)
Translates to: HGALRLSREGSERRESISQRFHG*FLGTLK
Trigger: TTTGAGAGTGCCGAGAAAGCATCCGTGGAAACGCTG...TGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp CCAGCAAGGGCTGGAAGGAGCACAGAGCCTGGGTTTGCTTCCGTGTGTGTCTTTCAGCGTTTCCACGGATaGTTTCTCGGCACTCTCAAA +
Preference number: 4 (lower is better)
Translates to: PARAGRSTEPGFASVCVFQRFHG*FLGTLK
Trigger: TTTGAGAGTGCCGAGAAAGCATCCGTGGAAACGCTG...AAAGACACACACGGAAGCAAACCCAGGCTCTGTGCTCCTTCCAGCCCTTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp GAGGAGGGAGAGTATTTCAGAGGGCACGGCAGAACTCGCCCTGCACTTCTTGAGCCTCTGAGACCGTTTTaGATAAGCAGGGAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: EEGEYFRGHGRTRPALLEPLRPF*ISRESV
Trigger: GACACTCTCCCTGCTTATGCAAAACGGTCTCAGAGG...CTCAAGAAGTGCAGGGCGAGTTCTGCCGTGCCCTCTGAAATACTCTCCCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp TTCCGACACGTTGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACTTGGGTCGGTTCTGCCCTaGAGTGAGGGCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: FRHVEGVQRTFHQLNGALGSVLP*SEGLGG
Trigger: ACCCCCAAGGCCCTCACTGCAGGGCAGAACCGACCC...AAGTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTAAATGGCTGGGGATGTaGGGCGGGTGGGGTCGGTTC +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQAKWLGM*GGWGRF
Trigger: GAACCGACCCCACCCGCCGCACATCCCCAGCCATTT...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR GCA 90 bp CACACATTCCTCACAGGGGCAATAAATGGTAAATCTCTCAGGAGGAGAGTGCTGATCGCGCCTCTGGGATaGAGCCTTCTCCCGCAGGAC +
Preference number: 4 (lower is better)
Translates to: HTFLTGAINGKSLRRRVLIAPLG*SLLPQD
Trigger: GTCCTGCGGGAGAAGGCTGCATCCCAGAGGCGCGAT...CAGCACTCTCCTCCTGAGAGATTTACCATTTATTGCCCCTGTGAGGAATGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp GGGTTTGCTTCCGTGTGTGTCTTTCTTGACCTTTGTGGCTGCTCTCCTGGTGACAAGGAGGGGTTCTGCTaGAGGACAGAGGTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GFASVCVFLDLCGCSPGDKEGFC*RTEVFS
Trigger: GGAGAACACCTCTGTCCTGCAGCAGAACCCCTCCTT...GTCACCAGGAGAGCAGCCACAAAGGTCAAGAAAGACACACACGGAAGCAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp GTTTCCGACACGTTGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACCGGGAGGGTGGAATCTaGGCCCCTGTACAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VSDTLREYKELFISSTEHREGGI*APVQAR
Trigger: CCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCG...GTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp GGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTTCACAGTGATGCATCTGCTAAGACTCCTGACTCCTaGCCACCCCAAACAAAGCTG +
Preference number: 4 (lower is better)
Translates to: GGQVQPRHVVLLHSDASAKTPDS*PPQTKL
Trigger: CAGCTTTGTTTGGGGTGGGCAGGAGTCAGGAGTCTT...AGCAGATGCATCACTGTGAAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp CACACATTCCTCACAGGGGCAATAAATGGTAAATCTCTCAGGAGGAGAGTGCTGCGACGGGAGGACAGGTaGAGCCCCGACATGTCGTTC +
Preference number: 4 (lower is better)
Translates to: HTFLTGAINGKSLRRRVLRREDR*SPDMSF
Trigger: GAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCG...CAGCACTCTCCTCCTGAGAGATTTACCATTTATTGCCCCTGTGAGGAATGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp GTTTCCGACACGTTGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACCTCTCAGGAGGAGAGTaGTGCCCCGCTTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VSDTLREYKELFISSTEHLSGGE*CPASGS
Trigger: GCTCCCTGAAGCGGGGCAGCACTCTCCTCCTGAGAG...GTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp GCCGACGCTCTAGGCTCTTGTCAGAGAAAACCTCTTCTTCCAGAAGGGGTAAGACCGAGATCACGCCATTaGACTCCAGCCTGGGCGATA +
Preference number: 4 (lower is better)
Translates to: ADALGSCQRKPLLPEGVRPRSRH*TPAWAI
Trigger: TATCGCCCAGGCTGGAGTGCAATGGCGTGATCTCGG...TCTTACCCCTTCTGGAAGAAGAGGTTTTCTCTGACAAGAGCCTAGAGCGTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR GCA 90 bp CCGTGTGTGTCTTTCTTGACCTTTGTGGCTGCTCTCCTGGTGACCGATCTCCTTTTGTGGGGTAGCATCTaGACCAGCAAGGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PCVSFLTFVAALLVTDLLLWGSI*TSKGWK
Trigger: CTTCCAGCCCTTGCTGGTGCAGATGCTACCCCACAA...AAGGAGATCGGTCACCAGGAGAGCAGCCACAAAGGTCAAGAAAGACACACACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR GCA 90 bp TTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCAGGATCCCTCTCTTGTaGCTCCCATCTTCACACCAT +
Preference number: 4 (lower is better)
Translates to: FNSPGGWNLRPCTSQVSFRIPLL*LPSSHH
Trigger: ATGGTGTGAAGATGGGAGGCACAAGAGAGGGATCCT...GAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465926.5
CDS-3UTR CCA 90 bp CCCTTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCGCTCACAGTAAGACTTaGCACTTCTCCCAATTTCTG +
Preference number: 4 (lower is better)
Translates to: PLSGFNSPGGWNLRPCTSAHSKT*HFSQFL
Trigger: CAGAAATTGGGAGAAGTGCCAAGTCTTACTGTGAGC...GCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTGGCCTTGGGGGTCACTaGCTGATTGGTCACCGGAGG +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQAGLGGH*LIGHRR
Trigger: CCTCCGGTGACCAATCAGCCAGTGACCCCCAAGGCC...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR CCA 90 bp CTTCCCTTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGAAGGGGTAAGACTTaGCAGTTCCCAAGCACACAT +
Preference number: 4 (lower is better)
Translates to: LPLSGFNSPGGWNLRPCTRRGKT*QFPSTH
Trigger: ATGTGTGCTTGGGAACTGCCAAGTCTTACCCCTTCT...TGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp GAGAGTATTTCAGAGGGCACGGCAGAACTCGCCCTGCACTTCTTGAGGACAGGGCTACATCCTCTGGGTTaGCTGAATGACCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: ESISEGTAELALHFLRTGLHPLG*LNDLPD
Trigger: ATCGGGAAGGTCATTCAGCCAACCCAGAGGATGTAG...CCCTGTCCTCAAGAAGTGCAGGGCGAGTTCTGCCGTGCCCTCTGAAATACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp ATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGCTACATCCTCTGGGTTaGCTGAATGACCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: MVHSGSRGRALRGGRVFQLHPLG*LNDLPD
Trigger: ATCGGGAAGGTCATTCAGCCAACCCAGAGGATGTAG...CTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp TTGCTTCCGTGTGTGTCTTTCTTGACCTTTGTGGCTGCTCTCCTGGTGACCGATCGAGGCCACAAGACATaGTGCACTCAGGCTCTCGAG +
Preference number: 4 (lower is better)
Translates to: LLPCVSFLTFVAALLVTDRGHKT*CTQALE
Trigger: CTCGAGAGCCTGAGTGCACCATGTCTTGTGGCCTCG...ATCGGTCACCAGGAGAGCAGCCACAAAGGTCAAGAAAGACACACACGGAAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp CAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTTCACAGTGGAGAGTGTCCACATTaGAACCCATCTCAACAAGTG +
Preference number: 4 (lower is better)
Translates to: QMPTGGQVQPRHVVLLHSGECPH*NPSQQV
Trigger: CACTTGTTGAGATGGGTTTCAATGTGGACACTCTCC...ACTGTGAAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp TTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCGGAGAGTGTCCACATTaGAACCCATCTCAACAAGTG +
Preference number: 4 (lower is better)
Translates to: FNSPGGWNLRPCTSQVSFGECPH*NPSQQV
Trigger: CACTTGTTGAGATGGGTTTCAATGTGGACACTCTCC...GAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR TCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTTTGGGGGTCACTGGCTaGTTGGTCACCGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQALGVTG*LVTGGA
Trigger: TGCTCCTCCGGTGACCAATCAGCCAGTGACCCCCAA...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR TCA 90 bp GGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGCAGAATCCTCCATGCTaGTATGAAGAGCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GALRLSREGSERRESISEQNPPC*YEEQGS
Trigger: AGAACCTTGCTCTTCATATCAGCATGGAGGATTCTG...CTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456846.6
CDS-3UTR TCA 90 bp GAGGGAGAGTATTTCAGAGGGCACGGCAGAACTCGCCCTGCACTTCTTGAGGACGATAAGGGTTATCGATaGTGTTCTCCTCCCCATTCC +
Preference number: 4 (lower is better)
Translates to: EGEYFRGHGRTRPALLEDDKGYR*CSPPHS
Trigger: GGAATGGGGAGGAGAACATCATCGATAACCCTTATC...GTCCTCAAGAAGTGCAGGGCGAGTTCTGCCGTGCCCTCTGAAATACTCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp CGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAGCCCCGACACTTTCCCTGGTCTCTTaGGTTTCAAAGGAATCAAAT +
Preference number: 4 (lower is better)
Translates to: RFRELSSNADGRTGAAPTLSLVS*VSKESN
Trigger: ATTTGATTCCTTTGAAACTCAAGAGACCAGGGAAAG...TGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp GGCTGCTCTCCTGGTGACCGATCTCCTTGGGGAGCACTTGGCAGCTTAGGGCAAGAGACTCTATCATGCTaGTATGAAGAGCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GCSPGDRSPWGALGSLGQETLSC*YEEQGS
Trigger: AGAACCTTGCTCTTCATATCAGCATGATAGAGTCTC...TTGCCCTAAGCTGCCAAGTGCTCCCCAAGGAGATCGGTCACCAGGAGAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR GCA 90 bp ATGCATCTGCTCAAGACTCCTGACTCCTGCCCACCCCAAACAAAGCTGTGCTGTAACGAAGTCACTGGCTaGTGCTATGCCCCACCACAT +
Preference number: 4 (lower is better)
Translates to: MHLLKTPDSCPPQTKLCCNEVTG*CYAPPH
Trigger: ATGTGGTGGGGCATAGCAGCAGCCAGTGACTTCGTT...ACAGCACAGCTTTGTTTGGGGTGGGCAGGAGTCAGGAGTCTTGAGCAGATGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp CCCTTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCTAACTCAGCACATCTaGATTCAACAGGTGCTTACA +
Preference number: 4 (lower is better)
Translates to: PLSGFNSPGGWNLRPCTSLTQHI*IQQVLT
Trigger: TGTAAGCACCTGTTGAATGCAGATGTGCTGAGTTAG...GCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR GCA 90 bp CAGGAGGAGAGTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGTCTTCACCATTTGTGTaGTGGTGGTTACACAAATCT +
Preference number: 4 (lower is better)
Translates to: QEESAAPLQGAFVKCRRESSPFV*WWLHKS
Trigger: AGATTTGTGTAACCACCAGCACACAAATGGTGAAGA...CTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCACTCTCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CCA 90 bp GTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTGCTCACAGTAAGACTTaGCACTTCTCCCAATTTCTG +
Preference number: 4 (lower is better)
Translates to: VALTPREGGICAPVQARFAHSKT*HFSQFL
Trigger: CAGAAATTGGGAGAAGTGCCAAGTCTTACTGTGAGC...AAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CCA 90 bp CTTCCCTTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAGCTCACAGTAAGACTTaGCACTTCTCCCAATTTCTG +
Preference number: 4 (lower is better)
Translates to: LPLSGFNSPGGWNLRPCTAHSKT*HFSQFL
Trigger: CAGAAATTGGGAGAAGTGCCAAGTCTTACTGTGAGC...TGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CCA 90 bp TATCCTGAAATACACGCTGGACAAACAGTCTTCCTTGTAATAAGCACAGCAGCAGGGATGTGCGGCGGGTaGGGTCGGTTCTGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: YPEIHAGQTVFLVISTAAGMCGG*GRFCPA
Trigger: TGCAGGGCAGAACCGACCCCACCCGCCGCACATCCC...TGCTGCTGTGCTTATTACAAGGAAGACTGTTTGTCCAGCGTGTATTTCAGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTACTCAGGAAAATGGCTaGGGATGTGCGGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQATQENG*GCAAGG
Trigger: CCCACCCGCCGCACATCCCCAGCCATTTTCCTGAGT...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR CCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTGGGAACTCAGGAAAATaGCTGGGGATGTGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQAGNSGK*LGMCGG
Trigger: CCCGCCGCACATCCCCAGCCATTTTCCTGAGTTCCC...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR CCA 90 bp CTGTTTAAACCCCATGGCTCCTCTGTCAAGTCCCAGCATAATAGAGCCGACGCTTGGAAGACTAAGAGATaGGCTGGGCACCGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LFKPHGSSVKSQHNRADAWKTKR*AGHRGS
Trigger: TGAGCCACGGTGCCCAGCCCATCTCTTAGTCTTCCA...AGCGTCGGCTCTATTATGCTGGGACTTGACAGAGGAGCCATGGGGTTTAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CCA 90 bp CTTCCGTGTGTGTCTTTCTTGACCTTTGTGGCTGCTCTCCTGGTGACCGATCTCGATCTGACAAGCTTGTaGGGTAGCATCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: LPCVSFLTFVAALLVTDLDLTSL*GSICTS
Trigger: GCTGGTGCAGATGCTACCCCACAAGCTTGTCAGATC...GAGATCGGTCACCAGGAGAGCAGCCACAAAGGTCAAGAAAGACACACACGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp GGGTTTGCTTCCGTGTGTGTCTTTCTTGACCTTTGTGGCTGCTCTCCTGGTGACGATCTGACAAGCTTGTaGGGTAGCATCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: GFASVCVFLDLCGCSPGDDLTSL*GSICTS
Trigger: GCTGGTGCAGATGCTACCCCACAAGCTTGTCAGATC...GTCACCAGGAGAGCAGCCACAAAGGTCAAGAAAGACACACACGGAAGCAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTTCGGCCATCTTGTTCTaGCGTAGTGTGCGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQASAILF*RSVRER
Trigger: GCGCTCGCGCACACTACGCCAGAACAAGATGGCCGA...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR TCA 90 bp GACCCCAGAGTTCCAGAGCATTCTGTGAAGCCAGAGGAAGGCTTCAGGCGAGGCACTTCTCCCAATTTCTaGAATGTAGCTCTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: DPRVPEHSVKPEEGFRRGTSPNF*NVALQH
Trigger: ATGCTGCAGAGCTACATTTCAGAAATTGGGAGAAGT...GCCTCGCCTGAAGCCTTCCTCTGGCTTCACAGAATGCTCTGGAACTCTGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR TCA 90 bp CTTCCCTTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAACTTCTCCCAATTTCTaGAATGTAGCTCTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LPLSGFNSPGGWNLRPCTTSPNF*NVALQH
Trigger: ATGCTGCAGAGCTACATTTCAGAAATTGGGAGAAGT...TGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR TCA 90 bp GGTTTGCTTCCGTGTGTGTCTTTCTTGACCTTTGTGGCTGCTCTCCTGGTGACCCCATCTCAACAAGTGTaGCCACGATATCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: GLLPCVSFLTFVAALLVTPSQQV*PRYRTV
Trigger: CACTGTCCGATATCGTGGTCACACTTGTTGAGATGG...GGTCACCAGGAGAGCAGCCACAAAGGTCAAGAAAGACACACACGGAAGCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp CTTCCGTGTGTGTCTTTCTTGACCTTTGTGGCTGCTCTCCTGGTGACCGATCTCTCTTTGAAAAGACTCTaGGTCTCGCCTGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LPCVSFLTFVAALLVTDLSLKRL*VSPVLA
Trigger: GGCCAAGACAGGCGAGACTCAGAGTCTTTTCAAAGA...GAGATCGGTCACCAGGAGAGCAGCCACAAAGGTCAAGAAAGACACACACGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp GTGTCTTTCTTGACCTTTGTGGCTGCTCTCCTGGTGACCGATCTCCTTGGGGAGTCCTCCATGCTGATATaGAGAGCAAGGTTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VSFLTFVAALLVTDLLGESSMLI*RARFSV
Trigger: CACAGAGAACCTTGCTCTTCATATCAGCATGGAGGA...CTCCCCAAGGAGATCGGTCACCAGGAGAGCAGCCACAAAGGTCAAGAAAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456846.6
CDS-3UTR TCA 90 bp TTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGAATCCTCCATGCTaGTATGAAGAGCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LTPREGGICAPVQARFPSQNPPC*YEEQGS
Trigger: AGAACCTTGCTCTTCATATCAGCATGGAGGATTCTG...AGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000465926.5
CDS-3UTR TCA 90 bp CTTCCCTTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACATGGTGCCACAAATTGTaGGTCAATAAAAGGGATCCA +
Preference number: 4 (lower is better)
Translates to: LPLSGFNSPGGWNLRPCTWCHKL*VNKRDP
Trigger: TGGATCCCTTTTATTGACTCACAATTTGTGGCACCA...TGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp TTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGTGGTGCCACAAATTGTaGGTCAATAAAAGGGATCCA +
Preference number: 4 (lower is better)
Translates to: LSGFNSPGGWNLRPCTSQWCHKL*VNKRDP
Trigger: TGGATCCCTTTTATTGACTCACAATTTGTGGCACCA...CTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp TTCCGACACGTTGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACTTAGCAGCTGCCAGGGATaGGGTCTGAGCCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: FRHVEGVQRTFHQLNGALSSCQG*GLSLWE
Trigger: TTCCCAGAGGCTCAGACCTCATCCCTGGCAGCTGCT...AAGTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR GCA 90 bp TCCAGAAGGGGTAAGACTTGGCAGTTCCCAAGCACACATTCCTCACAGGGGCAACAGCGTTTCCACGGATaGTTTCTCGGCACTCTCAAA +
Preference number: 4 (lower is better)
Translates to: SRRGKTWQFPSTHSSQGQQRFHG*FLGTLK
Trigger: TTTGAGAGTGCCGAGAAAGCATCCGTGGAAACGCTG...TTGCCCCTGTGAGGAATGTGTGCTTGGGAACTGCCAAGTCTTACCCCTTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp CACACATTCCTCACAGGGGCAATAAATGGTAAATCTCTCAGGAGGAGAGTGCTGCATGAAACGGGTAAGTaGCCGCTCCACATCGCGCCT +
Preference number: 4 (lower is better)
Translates to: HTFLTGAINGKSLRRRVLHETGK*PLHIAP
Trigger: AGGCGCGATGTGGAGCGGGCACTTACCCGTTTCATG...CAGCACTCTCCTCCTGAGAGATTTACCATTTATTGCCCCTGTGAGGAATGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp TTCTTCACAGTGATGCATCTGCTCAAGACTCCTGACTCCTGCCCACCCCAAACACCCCAAACAAAGCTGTaGTGTGTGGCCTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: FFTVMHLLKTPDSCPPQTPQTKL*CVASCF
Trigger: GAAACAGGAGGCCACACAGCACAGCTTTGTTTGGGG...TGTTTGGGGTGGGCAGGAGTCAGGAGTCTTGAGCAGATGCATCACTGTGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp GAAGGGGTAAGACTTGGCAGTTCCCAAGCACACATTCCTCACAGGGGCAATAAACTCAGACCTGCTTCTTaGAGAACGCCTCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: EGVRLGSSQAHIPHRGNKLRPAS*RTPQLG
Trigger: GCCAAGCTGAGGCGTTCTGCAAGAAGCAGGTCTGAG...TTTATTGCCCCTGTGAGGAATGTGTGCTTGGGAACTGCCAAGTCTTACCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR GCA 90 bp CTTTCCTACTGTTTAAACCCCATGGCTCCTCTGTCAAGTCCCAGCATAATAGAGCTGGGATCGCTCCACTaGACTCCATCCAGCCTAGGC +
Preference number: 4 (lower is better)
Translates to: LSYCLNPMAPLSSPSIIELGSLH*TPSSLG
Trigger: GCCTAGGCTGGATGGAGTGCAGTGGAGCGATCCCAG...CTCTATTATGCTGGGACTTGACAGAGGAGCCATGGGGTTTAAACAGTAGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR GCA 90 bp GAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTTGTGTTAAACTATGGTaGCTCCATGCTACTCAGCAA +
Preference number: 4 (lower is better)
Translates to: ELSSNADGRTGAAPTCRSCVKLW*LHATQQ
Trigger: TTGCTGAGTAGCATGGAGGCACCATAGTTTAACACA...AGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR GCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTCACGCGCAGTCCCAGTaGTTCATCACTCACCGGAGT +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQAHAQSQ*FITHRS
Trigger: ACTCCGGTGAGTGATGAAGCACTGGGACTGCGCGTG...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR CCA 90 bp ATTTGGCCCATAGGCCACAATTTACCAACCCTTAATCTAAGAAGAACAAAAACTCACCGGCCCCAGCTGTaGCCGCCGCGTCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: IWPIGHNLPTLNLRRTKTHRPQL*PPRRPS
Trigger: AGATGGCCGACGCGGCGGCCACAGCTGGGGCCGGTG...AGTTTTTGTTCTTCTTAGATTAAGGGTTGGTAAATTGTGGCCTATGGGCCAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472818.5
CDS-3UTR CCA 90 bp GTTTCCGACACGTTGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACCGATATCGGACAGTGTaGGCTGGGTCCTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: VSDTLREYKELFISSTEHRYRTV*AGSWLC
Trigger: ACACAGCCAGGACCCAGCCCACACTGTCCGATATCG...GTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTCGATATCGGACAGTGTaGGCTGGGTCCTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQARYRTV*AGSWLC
Trigger: ACACAGCCAGGACCCAGCCCACACTGTCCGATATCG...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR CCA 90 bp TTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGAATTCACCAAGGGAATaGAAGACTAAGAGATGGGCT +
Preference number: 4 (lower is better)
Translates to: LSGFNSPGGWNLRPCTSQNSPRE*KTKRWA
Trigger: AGCCCATCTCTTAGTCTTCCATTCCCTTGGTGAATT...CTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp ATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGACTTCTCCCAATTTCTaGAATGTAGCTCTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: MVHSGSRGRALRGGRVFQTSPNF*NVALQH
Trigger: ATGCTGCAGAGCTACATTTCAGAAATTGGGAGAAGT...CTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp GTTTCAAAGGAATCAAATCCTGTGATAATGAACGAAGTCACTGGCTGCTGCTATGGTTCTGCCCTGCAGTaGGGGCCTTGGGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: VSKESNPVIMNEVTGCCYGSALQ*GPWGSL
Trigger: CAGTGACCCCCAAGGCCCTCACTGCAGGGCAGAACC...ATAGCAGCAGCCAGTGACTTCGTTCATTATCACAGGATTTGATTCCTTTGAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp GCCGACGCTCTAGGCTCTTGTCAGAGAAAACCTCTTCTTCCAGAAGGGGTAAGATCTTTGAAAAGACTCTaGGTCTCGCCTGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: ADALGSCQRKPLLPEGVRSLKRL*VSPVLA
Trigger: GGCCAAGACAGGCGAGACTCAGAGTCTTTTCAAAGA...TCTTACCCCTTCTGGAAGAAGAGGTTTTCTCTGACAAGAGCCTAGAGCGTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp CTTCCGTGTGTGTCTTTCTTGACCTTTGTGGCTGCTCTCCTGGTGACCGATCTCGATAAGGGTTATCGATaGTGTTCTCCTCCCCATTCC +
Preference number: 4 (lower is better)
Translates to: LPCVSFLTFVAALLVTDLDKGYR*CSPPHS
Trigger: GGAATGGGGAGGAGAACATCATCGATAACCCTTATC...GAGATCGGTCACCAGGAGAGCAGCCACAAAGGTCAAGAAAGACACACACGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR TCA 90 bp AGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTCTTTCCCTGGTCTCTTaGGTTTCAAAGGAATCAAAT +
Preference number: 4 (lower is better)
Translates to: SGFNSPGGWNLRPCTSQVLSLVS*VSKESN
Trigger: ATTTGATTCCTTTGAAACTCAAGAGACCAGGGAAAG...AACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp GCCACTGCGCGTAGCCCCTCTTTCCTACTGTTTAAACCCCATGGCTCCTCTGTCAGAATCGCTAAGAACTaGATCACAAACCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: ATARSPSFLLFKPHGSSVRIAKN*ITNPEK
Trigger: CTTCTCAGGGTTTGTGATTCAGTTCTTAGCGATTCT...GACAGAGGAGCCATGGGGTTTAAACAGTAGGAAAGAGGGGCTACGCGCAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp CCAGCAAGGGCTGGAAGGAGCACAGAGCCTGGGTTTGCTTCCGTGTGTGTCTTTTCTATCATGCTGATATaGAGAGCAAGGTTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PARAGRSTEPGFASVCVFSIMLI*RARFSV
Trigger: CACAGAGAACCTTGCTCTTCATATCAGCATGATAGA...AAAGACACACACGGAAGCAAACCCAGGCTCTGTGCTCCTTCCAGCCCTTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR TCA 90 bp TTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGATTAGAATACATAGCTaGAGAAACACGCATGATGGG +
Preference number: 4 (lower is better)
Translates to: LSGFNSPGGWNLRPCTSQIRIHS*RNTHDG
Trigger: CCCATCATGCGTGTTTCTTCAGCTATGTATTCTAAT...CTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465926.5
CDS-3UTR TCA 90 bp AACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAAACGTACAGTCCCAATaGGATAAAATAGCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: NSPGGWNLRPCTSQVSFSNVQSQ*DKIAGL
Trigger: AAGACCTGCTATTTTATCTCATTGGGACTGTACGTT...TGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000465926.5
CDS-3UTR GCA 90 bp CTGTTTAAACCCCATGGCTCCTCTGTCAAGTCCCAGCATAATAGAGCCGACGCTCCTCTGAGACCGTTTTaGATAAGCAGGGAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: LFKPHGSSVKSQHNRADAPLRPF*ISRESV
Trigger: GACACTCTCCCTGCTTATGCAAAACGGTCTCAGAGG...AGCGTCGGCTCTATTATGCTGGGACTTGACAGAGGAGCCATGGGGTTTAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp TTCTTCACAGTGATGCATCTGCTCAAGACTCCTGACTCCTGCCCACCCCAAACAAGAGGGACTTCTTCCTaGGGATCTTGGGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: FFTVMHLLKTPDSCPPQTRGTSS*GSWASS
Trigger: TGAAGAAGCCCAAGATCCGCAGGAAGAAGTCCCTCT...TGTTTGGGGTGGGCAGGAGTCAGGAGTCTTGAGCAGATGCATCACTGTGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp ACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGCTTAATAAGACGGTTTaGCATGAAAATCATGTCCGA +
Preference number: 4 (lower is better)
Translates to: TPREGGICAPVQARFPSQLNKTV*HENHVR
Trigger: TCGGACATGATTTTCATGGCAAACCGTCTTATTAAG...CTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp TTCCGACACGTTGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACTTTCAGGAGGAGAGTGCTaGCCCGCTTCAGGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: FRHVEGVQRTFHQLNGALSGGEC*PASGSF
Trigger: AAAGCTCCCTGAAGCGGGGCAGCACTCTCCTCCTGA...AAGTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp GTTTCCGACACGTTGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACCCCCGCACTTGCACCTaGGCACAGGAAGTTGATGTT +
Preference number: 4 (lower is better)
Translates to: VSDTLREYKELFISSTEHPRTCT*AQEVDV
Trigger: AACATCAACTTCCTGTGCCCAGGTGCAAGTGCGGGG...GTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp GTTTCCGACACGTTGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACGGTACGTCGGAGTTTTaGTGTAGGTGTGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: VSDTLREYKELFISSTEHGTSEF*CRCGDQ
Trigger: CTGATCCCCACACCTACATCAAAACTCCGACGTACC...GTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp CTGTTTAAACCCCATGGCTCCTCTGTCAAGTCCCAGCATAATAGAGCCGACGCTGATAAGGGTTATCGATaGTGTTCTCCTCCCCATTCC +
Preference number: 4 (lower is better)
Translates to: LFKPHGSSVKSQHNRADADKGYR*CSPPHS
Trigger: GGAATGGGGAGGAGAACATCATCGATAACCCTTATC...AGCGTCGGCTCTATTATGCTGGGACTTGACAGAGGAGCCATGGGGTTTAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp CTTTCCTACTGTTTAAACCCCATGGCTCCTCTGTCAAGTCCCAGCATAATAGAGACCCTCTTCTTCCCTTaGGTGGCTTTAACTCCCCGG +
Preference number: 4 (lower is better)
Translates to: LSYCLNPMAPLSSPSIIETLFFP*VALTPR
Trigger: CCGGGGAGTTAAAGCCACTCAAGGGAAGAAGAGGGT...CTCTATTATGCTGGGACTTGACAGAGGAGCCATGGGGTTTAAACAGTAGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp ATGCATCTGCTCAAGACTCCTGACTCCTGCCCACCCCAAACAAAGCTGTGCTGTCTGTTTCCGACACGTTaGGGGAGTACAAAGAACTTT +
Preference number: 4 (lower is better)
Translates to: MHLLKTPDSCPPQTKLCCLFPTR*GSTKNF
Trigger: AAAGTTCTTTGTACTCCCTCAACGTGTCGGAAACAG...ACAGCACAGCTTTGTTTGGGGTGGGCAGGAGTCAGGAGTCTTGAGCAGATGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp TTCTTCACAGTGATGCATCTGCTCAAGACTCCTGACTCCTGCCCACCCCAAACACGTTCTTCTTCACAGTaGTGCATCTGCTCAAGACTC +
Preference number: 4 (lower is better)
Translates to: FFTVMHLLKTPDSCPPQTRSSSQ*CICSRL
Trigger: GAGTCTTGAGCAGATGCATCACTGTGAAGAAGAACG...TGTTTGGGGTGGGCAGGAGTCAGGAGTCTTGAGCAGATGCATCACTGTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp GTTTCCGACACGTTGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACAAGCTGCAGAAACACTaGCTGGGACAACACCTCCCA +
Preference number: 4 (lower is better)
Translates to: VSDTLREYKELFISSTEHKLQKH*LGQHLP
Trigger: TGGGAGGTGTTGTCCCAGTCAGTGTTTCTGCAGCTT...GTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp TTTCGTCAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTTGAATCAACAAGCTACTaGCAAGTGTGGAAGCTTGAT +
Preference number: 4 (lower is better)
Translates to: FRQMPTGGQVQPRHVVLLESTSY*QVWKLD
Trigger: ATCAAGCTTCCACACTTGTCAGTAGCTTGTTGATTC...AAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp ATCTCTCAGGAGGAGAGTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGAAGTGGGAGAAACAGATaGAACAGAATCAACAAGCTA +
Preference number: 4 (lower is better)
Translates to: ISQEESAAPLQGAFVKCRSGRNR*NRINKL
Trigger: TAGCTTGTTGATTCTGTTTCATCTGTTTCTCCCACT...TCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCACTCTCCTCCTGAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp GTTTCAAAGGAATCAAATCCTGTGATAATGAACGAAGTCACTGGCTGCTGCTATGGCAGGAGAATGGCGTaGACCTGGGTGGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: VSKESNPVIMNEVTGCCYGRRMA*TWVAEL
Trigger: AAGCTCCGCCACCCAGGTTCACGCCATTCTCCTGCC...ATAGCAGCAGCCAGTGACTTCGTTCATTATCACAGGATTTGATTCCTTTGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp CAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTTCACAGTAAAGAAAGGAACTACTaGTACACACAACCACCTAGA +
Preference number: 4 (lower is better)
Translates to: QMPTGGQVQPRHVVLLHSKERNY*YTQPPR
Trigger: TCTAGGTGGTTGTGTGTATCAGTAGTTCCTTTCTTT...ACTGTGAAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp GTTTCAAAGGAATCAAATCCTGTGATAATGAACGAAGTCACTGGCTGCTGCTATGCCAGGGATGAGGTCTaGGCCTCTGGGAAACAGGGG +
Preference number: 4 (lower is better)
Translates to: VSKESNPVIMNEVTGCCYARDEV*ASGKQG
Trigger: CCCCTGTTTCCCAGAGGCTCAGACCTCATCCCTGGC...ATAGCAGCAGCCAGTGACTTCGTTCATTATCACAGGATTTGATTCCTTTGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTCACTCACCGGAGTTTTaGTGTAGGTGTGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQAHSPEF*CRCGDQ
Trigger: CTGATCCCCACACCTACATCAAAACTCCGGTGAGTG...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR GCA 90 bp TTCCGACACGTTGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACTTAAGGAGGGGTTCTGCTaGAGGACAGAGGTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: FRHVEGVQRTFHQLNGALKEGFC*RTEVFS
Trigger: GGAGAACACCTCTGTCCTGCAGCAGAACCCCTCCTT...AAGTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp TTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGACCTCAAGAGAATTATaGAGAACTGAAAAAGCCAAC +
Preference number: 4 (lower is better)
Translates to: LSGFNSPGGWNLRPCTSQTSREL*RTEKAN
Trigger: GTTGGCTTTTTCAGTTCTGCATAATTCTCTTGAGGT...CTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CCA 90 bp GACCGATCTCCTTGGGGAGCACTTGGCAGCTTAGGGCAAAGTCTCACAATTCTCGCTCACAGTAAGACTTaGCACTTCTCCCAATTTCTG +
Preference number: 4 (lower is better)
Translates to: DRSPWGALGSLGQSLTILAHSKT*HFSQFL
Trigger: CAGAAATTGGGAGAAGTGCCAAGTCTTACTGTGAGC...GAGAATTGTGAGACTTTGCCCTAAGCTGCCAAGTGCTCCCCAAGGAGATCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR CCA 90 bp CACACATTCCTCACAGGGGCAATAAATGGTAAATCTCTCAGGAGGAGAGTGCTGGTAATCGCAACTCTTTaGGAGGCCAATGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: HTFLTGAINGKSLRRRVLVIATL*EANAGG
Trigger: TCCACCCGCATTGGCCTCCCAAAGAGTTGCGATTAC...CAGCACTCTCCTCCTGAGAGATTTACCATTTATTGCCCCTGTGAGGAATGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp CAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTTCACAGTACTGTACTGATGCAATaGTTCTGTGTCTTCACCATT +
Preference number: 4 (lower is better)
Translates to: QMPTGGQVQPRHVVLLHSTVLMQ*FCVFTI
Trigger: AATGGTGAAGACACAGAACCATTGCATCAGTACAGT...ACTGTGAAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR CAA 72 bp CAAAGCTGTGCTGTGTGGCCTCCTGTTTCCGACACGTaGAGGGAGTACAAAGAACTTTTCATCAGCTCAACG +
Preference number: 4 (lower is better)
Translates to: QSCAVWPPVSDT*REYKELFISST
Trigger: CGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAAACAGGAGGCCACACAGCACAGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTCCATCTCAACAAGTGTaGCCACGATATCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQAPSQQV*PRYRTV
Trigger: CACTGTCCGATATCGTGGTCACACTTGTTGAGATGG...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR TCA 90 bp GCCGACGCTCTAGGCTCTTGTCAGAGAAAACCTCTTCTTCCAGAAGGGGTAAGACAGAATCCTCCATGCTaGTATGAAGAGCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: ADALGSCQRKPLLPEGVRQNPPC*YEEQGS
Trigger: AGAACCTTGCTCTTCATATCAGCATGGAGGATTCTG...TCTTACCCCTTCTGGAAGAAGAGGTTTTCTCTGACAAGAGCCTAGAGCGTCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp TTCCGACACGTTGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACTTAGGCGGGTTATCACTTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: FRHVEGVQRTFHQLNGALRRVIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAAGTGATAACCCGCCT...AAGTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp ATGCATCTGCTCAAGACTCCTGACTCCTGCCCACCCCAAACAAAGCTGTGCTGTCAAAATAAAAGGAGTTaGACTGTGGAAGCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: MHLLKTPDSCPPQTKLCCQNKRS*TVEAKG
Trigger: CCCTTTGGCTTCCACAGTTCAACTCCTTTTATTTTG...ACAGCACAGCTTTGTTTGGGGTGGGCAGGAGTCAGGAGTCTTGAGCAGATGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp GGGTTTGCTTCCGTGTGTGTCTTTCTTGACCTTTGTGGCTGCTCTCCTGGTGACCATGTAAAATTCTTTTaGGGAGAGACCAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GFASVCVFLDLCGCSPGDHVKFF*GETRRR
Trigger: CCTTCTCCTGGTCTCTCCTCAAAAGAATTTTACATG...GTCACCAGGAGAGCAGCCACAAAGGTCAAGAAAGACACACACGGAAGCAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR TCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTACAGTCAGTAGGAACTaGCTCCGTGCTTTACACCAC +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQATVSRN*LRALHH
Trigger: GTGGTGTAAAGCACGGAGTCAGTTCCTACTGACTGT...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR TCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTTGCCCGGCCACATTCTaGGTTTTGAACCACTCTTTC +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQACPATF*VLNHSF
Trigger: GAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCA...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR GCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTCAGCGTTTCCACGGATaGTTTCTCGGCACTCTCAAA +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQAQRFHG*FLGTLK
Trigger: TTTGAGAGTGCCGAGAAAGCATCCGTGGAAACGCTG...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR GCA 90 bp GTTTCCGACACGTTGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACCCTCTGAGACCGTTTTaGATAAGCAGGGAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: VSDTLREYKELFISSTEHPLRPF*ISRESV
Trigger: GACACTCTCCCTGCTTATGCAAAACGGTCTCAGAGG...GTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTCCTCTGAGACCGTTTTaGATAAGCAGGGAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQAPLRPF*ISRESV
Trigger: GACACTCTCCCTGCTTATGCAAAACGGTCTCAGAGG...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR GCA 90 bp GCCAAAGGGGAATACATGAAGCTAAATATGGACGTTAGGATTCTAATTTGGGAACGACGGGAGGACAGGTaGAGCCCCGACATGTCGTTC +
Preference number: 4 (lower is better)
Translates to: AKGEYMKLNMDVRILIWERREDR*SPDMSF
Trigger: GAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCG...TTCCCAAATTAGAATCCTAACGTCCATATTTAGCTTCATGTATTCCCCTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR GCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTTTTTGGACTGGACTCTaGCACGTGACAGTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQAFWTGL*HVTVSR
Trigger: CCTACTGACTGTCACGTGGCAGAGTCCAGTCCAAAA...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR TCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTGGAGAGTGTCCACATTaGAACCCATCTCAACAAGTG +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQAGECPH*NPSQQV
Trigger: CACTTGTTGAGATGGGTTTCAATGTGGACACTCTCC...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR TCA 90 bp TTCCGACACGTTGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACTTTCTTTGAAAAGACTCTaGGTCTCGCCTGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: FRHVEGVQRTFHQLNGALSLKRL*VSPVLA
Trigger: GGCCAAGACAGGCGAGACTCAGAGTCTTTTCAAAGA...AAGTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp GCCAAAGGGGAATACATGAAGCTAAATATGGACGTTAGGATTCTAATTTGGGAATGTCCGATCACACCCTaGAGCCTCGGCTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: AKGEYMKLNMDVRILIWECPITP*SLGLAM
Trigger: CATGGCCAAGCCGAGGCTGCAGGGTGTGATCGGACA...TTCCCAAATTAGAATCCTAACGTCCATATTTAGCTTCATGTATTCCCCTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CCA 90 bp CACACATTCCTCACAGGGGCAATAAATGGTAAATCTCTCAGGAGGAGAGTGCTGAGAAGGGGTAAGACTTaGCAGTTCCCAAGCACACAT +
Preference number: 4 (lower is better)
Translates to: HTFLTGAINGKSLRRRVLRRGKT*QFPSTH
Trigger: ATGTGTGCTTGGGAACTGCCAAGTCTTACCCCTTCT...CAGCACTCTCCTCCTGAGAGATTTACCATTTATTGCCCCTGTGAGGAATGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp CTTTCCTACTGTTTAAACCCCATGGCTCCTCTGTCAAGTCCCAGCATAATAGAGGTAATCTCAACACTTTaGAAGGCCAAGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LSYCLNPMAPLSSPSIIEVISTL*KAKAGG
Trigger: TCCACCCGCCTTGGCCTTCCAAAGTGTTGAGATTAC...CTCTATTATGCTGGGACTTGACAGAGGAGCCATGGGGTTTAAACAGTAGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTAACAAGCTTTTGGACTaGACTCTGCCACGTGACAGT +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQANKLLD*TLPRDS
Trigger: ACTGTCACGTGGCAGAGTCCAGTCCAAAAGCTTGTT...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR CCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTTCATCAACAAGCTTTTaGACTGGACTCTGCCACGTG +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQASSTSF*TGLCHV
Trigger: CACGTGGCAGAGTCCAGTCCAAAAGCTTGTTGATGA...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR TCA 90 bp TATATTGTAGGTAGCCCCAAACATTGGAAGAGAGCCCACAACAAGGAAGTAGCTCCATCTCAACAAGTGTaGCCACGATATCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: YIVGSPKHWKRAHNKEVAPSQQV*PRYRTV
Trigger: CACTGTCCGATATCGTGGTCACACTTGTTGAGATGG...AGCTACTTCCTTGTTGTGGGCTCTCTTCCAATGTTTGGGGCTACCTACAATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472818.5
CDS-3UTR TCA 90 bp TTCCGACACGTTGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACTTGATAAGGGTTATCGATaGTGTTCTCCTCCCCATTCC +
Preference number: 4 (lower is better)
Translates to: FRHVEGVQRTFHQLNGALDKGYR*CSPPHS
Trigger: GGAATGGGGAGGAGAACATCATCGATAACCCTTATC...AAGTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp CCCAAACATCCAGTGAAAATAGGTCATCTTAATAAGACGGTTTGCCATGAAAATGCCTCGGCTTGGCCATaGGGAGGTCACCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PKHPVKIGHLNKTVCHENASAWP*GGHPLL
Trigger: AAGAAGAGGGTGACCTCCTCATGGCCAAGCCGAGGC...ATTTTCATGGCAAACCGTCTTATTAAGATGACCTATTTTCACTGGATGTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp TATCCTGAAATACACGCTGGACAAACAGTCTTCCTTGTAATAAGCACAGCAGCACCCCAAACAAAGCTGTaGTGTGTGGCCTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: YPEIHAGQTVFLVISTAAPQTKL*CVASCF
Trigger: GAAACAGGAGGCCACACAGCACAGCTTTGTTTGGGG...TGCTGCTGTGCTTATTACAAGGAAGACTGTTTGTCCAGCGTGTATTTCAGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTGCTCACAGTAAGACTTaGCACTTCTCCCAATTTCTG +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQAAHSKT*HFSQFL
Trigger: CAGAAATTGGGAGAAGTGCCAAGTCTTACTGTGAGC...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR CCA 90 bp TGGCCCATAGGCCACAATTTACCAACCCTTAATCTAAGAAGAACAAAAACTTTCCGATATCGGACAGTGTaGGCTGGGTCCTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: WPIGHNLPTLNLRRTKTFRYRTV*AGSWLC
Trigger: ACACAGCCAGGACCCAGCCCACACTGTCCGATATCG...GAAAGTTTTTGTTCTTCTTAGATTAAGGGTTGGTAAATTGTGGCCTATGGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472818.5
CDS-3UTR CCA 90 bp TATCCTGAAATACACGCTGGACAAACAGTCTTCCTTGTAATAAGCACAGCAGCAAATGAACGAAGTCACTaGCTGCTGCTATGCCCCACC +
Preference number: 4 (lower is better)
Translates to: YPEIHAGQTVFLVISTAANERSH*LLLCPT
Trigger: GGTGGGGCATAGCAGCAGCCAGTGACTTCGTTCATT...TGCTGCTGTGCTTATTACAAGGAAGACTGTTTGTCCAGCGTGTATTTCAGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR CAA 72 bp AGAATGAAGTTGTTCTCCCCACAGGATACAAATTGGTaGGACAGACTCAGACCTGCTTCTTGCAGAACGCCT +
Preference number: 4 (lower is better)
Translates to: RMKLFSPQDTNW*DRLRPASCRTP
Trigger: AGGCGTTCTGCAAGAAGCAGGTCTGAGTCTGTCCAACCAATTTGTATCCTGTGGGGAGAACAACTTCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp CACACATTCCTCACAGGGGCAATAAATGGTAAATCTCTCAGGAGGAGAGTGCTGACTTCTCCCAATTTCTaGAATGTAGCTCTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: HTFLTGAINGKSLRRRVLTSPNF*NVALQH
Trigger: ATGCTGCAGAGCTACATTTCAGAAATTGGGAGAAGT...CAGCACTCTCCTCCTGAGAGATTTACCATTTATTGCCCCTGTGAGGAATGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTACTTCTCCCAATTTCTaGAATGTAGCTCTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQATSPNF*NVALQH
Trigger: ATGCTGCAGAGCTACATTTCAGAAATTGGGAGAAGT...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR TCA 90 bp TTCTGTTCATATCTTCCTCAACCCAAACATCCAGTGAAAATAGGTCATCTTAATTTGGGGGTCACTGGCTaGTTGGTCACCGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: FCSYLPQPKHPVKIGHLNLGVTG*LVTGGA
Trigger: TGCTCCTCCGGTGACCAATCAGCCAGTGACCCCCAA...ATTAAGATGACCTATTTTCACTGGATGTTTGGGTTGAGGAAGATATGAACAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp ACTTGGCAGCTTAGGGCAAAGTCTCACAATTCTCTAGAATGTATCTGGCTTCTTCACAGAGCCTGGGTTTaGTTCCGTGTGTGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TWQLRAKSHNSLECIWLLHRAWV*FRVCLS
Trigger: AGAAAGACACACACGGAAGCAAACCCAGGCTCTGTG...AAGAAGCCAGATACATTCTAGAGAATTGTGAGACTTTGCCCTAAGCTGCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR CCA 90 bp TATCCTGAAATACACGCTGGACAAACAGTCTTCCTTGTAATAAGCACAGCAGCAATTAGCCAGATGTGGTaGCGGGCATCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: YPEIHAGQTVFLVISTAAISQMW*RASVIP
Trigger: TGGGATTACAGATGCCCGCCACCACATCTGGCTAAT...TGCTGCTGTGCTTATTACAAGGAAGACTGTTTGTCCAGCGTGTATTTCAGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CCA 90 bp CTTTCCTACTGTTTAAACCCCATGGCTCCTCTGTCAAGTCCCAGCATAATAGAGAAAATTAGCCAGATGTaGTGGCGGGCATCTGTAATC +
Preference number: 4 (lower is better)
Translates to: LSYCLNPMAPLSSPSIIEKISQM*WRASVI
Trigger: GATTACAGATGCCCGCCACCACATCTGGCTAATTTT...CTCTATTATGCTGGGACTTGACAGAGGAGCCATGGGGTTTAAACAGTAGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp TATCCTGAAATACACGCTGGACAAACAGTCTTCCTTGTAATAAGCACAGCAGCACGTTCTTCTTCACAGTaGTGCATCTGCTCAAGACTC +
Preference number: 4 (lower is better)
Translates to: YPEIHAGQTVFLVISTAARSSSQ*CICSRL
Trigger: GAGTCTTGAGCAGATGCATCACTGTGAAGAAGAACG...TGCTGCTGTGCTTATTACAAGGAAGACTGTTTGTCCAGCGTGTATTTCAGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTCCACATTCTGAGTTTTaGACCACTCTTTCATCAACA +
Preference number: 4 (lower is better)
Translates to: ANVPGHILSFEPLFHQQAPHSEF*TTLSST
Trigger: TGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGG...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR GCA 90 bp GTTTCCGACACGTTGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACGAAAAGCTATCAGCATaGCCAGCATCTTCCTTAAAA +
Preference number: 4 (lower is better)
Translates to: VSDTLREYKELFISSTEHEKLSA*PASSLK
Trigger: TTTTAAGGAAGATGCTGGGCATGCTGATAGCTTTTC...GTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR CAA 72 bp GTTAAGAATGAAGTTGTTCTCCCCACAGGATACAAATaGGTTGGACAGACTCAGACCTGCTTCTTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: VKNEVVLPTGYK*VGQTQTCFLQN
Trigger: GTTCTGCAAGAAGCAGGTCTGAGTCTGTCCAACCAATTTGTATCCTGTGGGGAGAACAACTTCATTCTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR GCA 90 bp TTCCGACACGTTGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACTTACTATGGTGCCTCCATaGTACTCAGCAATAAAAAGA +
Preference number: 4 (lower is better)
Translates to: FRHVEGVQRTFHQLNGALTMVPP*YSAIKR
Trigger: TCTTTTTATTGCTGAGTAGCATGGAGGCACCATAGT...AAGTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CCA 90 bp TGGCCCATAGGCCACAATTTACCAACCCTTAATCTAAGAAGAACAAAAACTTTCGAGGCAGGCTGCATTTaGCCCATAGGCCACAATTTA +
Preference number: 4 (lower is better)
Translates to: WPIGHNLPTLNLRRTKTFEAGCI*PIGHNL
Trigger: TAAATTGTGGCCTATGGGCCAAATGCAGCCTGCCTC...GAAAGTTTTTGTTCTTCTTAGATTAAGGGTTGGTAAATTGTGGCCTATGGGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472818.5
3UTR CAA 72 bp CATTGTACACTGAAACTGAATGCAAGGGTTTTGATATaGCACCACAGTTATGCAAGATGCTACCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: HCTLKLNARVLI*HHSYARCYHWE
Trigger: CTCCCAGTGGTAGCATCTTGCATAACTGTGGTGCAATATCAAAACCCTTGCATTCAGTTTCAGTGTACAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR GCA 90 bp ATTTGGCCCATAGGCCACAATTTACCAACCCTTAATCTAAGAAGAACAAAAACTCCTCTGAGACCGTTTTaGATAAGCAGGGAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: IWPIGHNLPTLNLRRTKTPLRPF*ISRESV
Trigger: GACACTCTCCCTGCTTATGCAAAACGGTCTCAGAGG...AGTTTTTGTTCTTCTTAGATTAAGGGTTGGTAAATTGTGGCCTATGGGCCAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472818.5
CDS-3UTR GCA 90 bp TTCCGACACGTTGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACTTCTTAATAAGACGGTTTaGCATGAAAATCATGTCCGA +
Preference number: 4 (lower is better)
Translates to: FRHVEGVQRTFHQLNGALLNKTV*HENHVR
Trigger: TCGGACATGATTTTCATGGCAAACCGTCTTATTAAG...AAGTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR GCA 90 bp GCCAAAGGGGAATACATGAAGCTAAATATGGACGTTAGGATTCTAATTTGGGAAGAAGAACATGGAGCCTaGTGTCAAGTCCCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: AKGEYMKLNMDVRILIWEEEHGA*CQVPKF
Trigger: AAACTTGGGGACTTGACAGCAGGCTCCATGTTCTTC...TTCCCAAATTAGAATCCTAACGTCCATATTTAGCTTCATGTATTCCCCTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
3UTR CAA 72 bp AACTGTACTGATGCAATGGTTCTGTGTCTTCACCATTaGTGTGCTGGTGGTTACACAAATCTACACGATGAA +
Preference number: 4 (lower is better)
Translates to: NCTDAMVLCLHH*CAGGYTNLHDE
Trigger: TTCATCGTGTAGATTTGTGTAACCACCAGCACACAAATGGTGAAGACACAGAACCATTGCATCAGTACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp TTCTGTTCATATCTTCCTCAACCCAAACATCCAGTGAAAATAGGTCATCTTAATCCATCTCAACAAGTGTaGCCACGATATCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: FCSYLPQPKHPVKIGHLNPSQQV*PRYRTV
Trigger: CACTGTCCGATATCGTGGTCACACTTGTTGAGATGG...ATTAAGATGACCTATTTTCACTGGATGTTTGGGTTGAGGAAGATATGAACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR TCA 90 bp CCCAAACATCCAGTGAAAATAGGTCATCTTAATAAGACGGTTTGCCATGAAAATTGCAAAGAGACAGCATaGGGGAGAACTGTACTGATG +
Preference number: 4 (lower is better)
Translates to: PKHPVKIGHLNKTVCHENCKETA*GRTVLM
Trigger: CATCAGTACAGTTCTCCCTCATGCTGTCTCTTTGCA...ATTTTCATGGCAAACCGTCTTATTAAGATGACCTATTTTCACTGGATGTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp GTTTCAAAGGAATCAAATCCTGTGATAATGAACGAAGTCACTGGCTGCTGCTATTCTATCATGCTGATATaGAGAGCAAGGTTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VSKESNPVIMNEVTGCCYSIMLI*RARFSV
Trigger: CACAGAGAACCTTGCTCTTCATATCAGCATGATAGA...ATAGCAGCAGCCAGTGACTTCGTTCATTATCACAGGATTTGATTCCTTTGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494547.5
CDS-3UTR TCA 90 bp TATATTGTAGGTAGCCCCAAACATTGGAAGAGAGCCCACAACAAGGAAGTAGCTTTACCTTTTGGTGACTaGATTTCACATGCTAATCAG +
Preference number: 4 (lower is better)
Translates to: YIVGSPKHWKRAHNKEVALPFGD*ISHANQ
Trigger: CTGATTAGCATGTGAAATTCAGTCACCAAAAGGTAA...AGCTACTTCCTTGTTGTGGGCTCTCTTCCAATGTTTGGGGCTACCTACAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472818.5
CDS-3UTR GCA 90 bp CCCATAGGCCACAATTTACCAACCCTTAATCTAAGAAGAACAAAAACTTTCATTCAGCGTTTCCACGGATaGTTTCTCGGCACTCTCAAA +
Preference number: 4 (lower is better)
Translates to: PIGHNLPTLNLRRTKTFIQRFHG*FLGTLK
Trigger: TTTGAGAGTGCCGAGAAAGCATCCGTGGAAACGCTG...AATGAAAGTTTTTGTTCTTCTTAGATTAAGGGTTGGTAAATTGTGGCCTATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472818.5
CDS-3UTR CCA 90 bp CCCATAGGCCACAATTTACCAACCCTTAATCTAAGAAGAACAAAAACTTTCATTGGTAGCCCCAAACATTaGAAGAGAGCCCACAACAAG +
Preference number: 4 (lower is better)
Translates to: PIGHNLPTLNLRRTKTFIGSPKH*KRAHNK
Trigger: CTTGTTGTGGGCTCTCTTCCAATGTTTGGGGCTACC...AATGAAAGTTTTTGTTCTTCTTAGATTAAGGGTTGGTAAATTGTGGCCTATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472818.5
CDS-3UTR TCA 90 bp CCCATAGGCCACAATTTACCAACCCTTAATCTAAGAAGAACAAAAACTTTCATTGGAGAGTGTCCACATTaGAACCCATCTCAACAAGTG +
Preference number: 4 (lower is better)
Translates to: PIGHNLPTLNLRRTKTFIGECPH*NPSQQV
Trigger: CACTTGTTGAGATGGGTTTCAATGTGGACACTCTCC...AATGAAAGTTTTTGTTCTTCTTAGATTAAGGGTTGGTAAATTGTGGCCTATGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472818.5
CDS-3UTR GCA 90 bp GCCAAAGGGGAATACATGAAGCTAAATATGGACGTTAGGATTCTAATTTGGGAAATAGGCCAGTCTAACTaGTTCGATCTAGGAGAGTTT +
Preference number: 4 (lower is better)
Translates to: AKGEYMKLNMDVRILIWEIGQSN*FDLGEF
Trigger: AAACTCTCCTAGATCGAAGCAGTTAGACTGGCCTAT...TTCCCAAATTAGAATCCTAACGTCCATATTTAGCTTCATGTATTCCCCTTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CCA 90 bp ATTTGGCCCATAGGCCACAATTTACCAACCCTTAATCTAAGAAGAACAAAAACTGCTCACAGTAAGACTTaGCACTTCTCCCAATTTCTG +
Preference number: 4 (lower is better)
Translates to: IWPIGHNLPTLNLRRTKTAHSKT*HFSQFL
Trigger: CAGAAATTGGGAGAAGTGCCAAGTCTTACTGTGAGC...AGTTTTTGTTCTTCTTAGATTAAGGGTTGGTAAATTGTGGCCTATGGGCCAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472818.5
3UTR CAA 72 bp CATCTACATTGTACACTGAAACTGAATGCAAGGGTTTaGATATTGCACCACAGTTATGCAAGATGCTACCAC +
Preference number: 4 (lower is better)
Translates to: HLHCTLKLNARV*ILHHSYARCYH
Trigger: GTGGTAGCATCTTGCATAACTGTGGTGCAATATCAAAACCCTTGCATTCAGTTTCAGTGTACAATGTAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp TTCTGTTCATATCTTCCTCAACCCAAACATCCAGTGAAAATAGGTCATCTTAATCCCCACCACATAGCCTaGTTGATTAAGAAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: FCSYLPQPKHPVKIGHLNPHHIA*LIKKVS
Trigger: AGAGACTTTCTTAATCAATCAGGCTATGTGGTGGGG...ATTAAGATGACCTATTTTCACTGGATGTTTGGGTTGAGGAAGATATGAACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
3UTR CAA 72 bp AAACAGAATCAACAAGCTACTGACAAGTGTGGAAGCTaGATGAGGCATATACAGGGGTTCATATATTTTGCT +
Preference number: 4 (lower is better)
Translates to: KQNQQATDKCGS*MRHIQGFIYFA
Trigger: AGCAAAATATATGAACCCCTGTATATGCCTCATCAAGCTTCCACACTTGTCAGTAGCTTGTTGATTCTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR TCA 90 bp TTCTGTTCATATCTTCCTCAACCCAAACATCCAGTGAAAATAGGTCATCTTAATGAGACTCTATCATGCTaGTATGAAGAGCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: FCSYLPQPKHPVKIGHLNETLSC*YEEQGS
Trigger: AGAACCTTGCTCTTCATATCAGCATGATAGAGTCTC...ATTAAGATGACCTATTTTCACTGGATGTTTGGGTTGAGGAAGATATGAACAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494547.5
CDS CCA 90 bp ACTGTTTACTTCCCGATCTCGTTCCGGAGCCACCGGCCCCAGCTGTaGCCGCCGCGTCGGCCATCTTGTTCTGGCGTAGTGTGCGCGAGC +
Preference number: 5 (lower is better)
Translates to: TVYFPISFRSHRPQL*PPRRPSCSGVVCAS
Trigger: GCTCGCGCACACTACGCCAGAACAAGATGGCCGACGCGGCGGCCACAGCTGGGGCCGGTGGCTCCGGAACGAGATCGGGAAGTAAACAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR CAA 90 bp CTGCGCCTGGCCCGTCACCTGGGCGATCTGACAAGCTTGTGGGGTAGCATCTGCTTCTTCCTGCGGATCTaGGGCTTCTTCACCGGCCGC +
Preference number: 5 (lower is better)
Translates to: LRLARHLGDLTSLWGSICFFLRI*GFFTGR
Trigger: GCGGCCGGTGAAGAAGCCCAAGATCCGCAGGAAGAA...GCAGATGCTACCCCACAAGCTTGTCAGATCGCCCAGGTGACGGGCCAGGCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CAA 90 bp TGGCTGCGCCTGGCCCGTCACCTGGGCGATCTGACAAGCTTGTGGGGTAGCATCGTGCAGGGCTTTGGGTaGGAGCTGGCTATATGGCCA +
Preference number: 5 (lower is better)
Translates to: WLRLARHLGDLTSLWGSIVQGFG*ELAIWP
Trigger: TGGCCATATAGCCAGCTCCAACCCAAAGCCCTGCAC...GATGCTACCCCACAAGCTTGTCAGATCGCCCAGGTGACGGGCCAGGCGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS TCA 90 bp ATCGCGCCTCTGGGATGCAGCCTTCTCCCGCAGGACCTGGTAGTCTaGCACGGGCTCACGGTACGTCGGAGTTTTGATGTAGGTGTGGGG +
Preference number: 5 (lower is better)
Translates to: IAPLGCSLLPQDLVV*HGLTVRRSFDVGVG
Trigger: CCCCACACCTACATCAAAACTCCGACGTACCGTGAGCCCGTGTCAGACTACCAGGTCCTGCGGGAGAAGGCTGCATCCCAGAGGCGCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372977.8
ENST00000372982.8
ENST00000456846.6
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CAA 90 bp GCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTTCTTCCTGCGGATCTaGGGCTTCTTCACCGGCCGC +
Preference number: 5 (lower is better)
Translates to: ALTPREGGICAPVQARFPFFLRI*GFFTGR
Trigger: GCGGCCGGTGAAGAAGCCCAAGATCCGCAGGAAGAA...AGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CAA 90 bp CTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGCCACCCTCTTCTTCCCTaGAGTGGCTTTAACTCCCCG +
Preference number: 5 (lower is better)
Translates to: LPGRVESAPLYKPGFLLSHPLLP*SGFNSP
Trigger: CGGGGAGTTAAAGCCACTCAAGGGAAGAAGAGGGTG...GCTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CAA 90 bp ACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGAGCTCAACGGAGCACTaGGGAGGCCAGATGAGGAGA +
Preference number: 5 (lower is better)
Translates to: TPREGGICAPVQARFPSQSSTEH*GGQMRR
Trigger: TCTCCTCATCTGGCCTCCCAAGTGCTCCGTTGAGCT...CTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CAA 90 bp GCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCGGCGATCTGACAAGCTaGTGGGGTAGCATCTGCACC +
Preference number: 5 (lower is better)
Translates to: ALRLSREGSERRESISEGGDLTS*WGSICT
Trigger: GGTGCAGATGCTACCCCACAAGCTTGTCAGATCGCC...GCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CAA 90 bp CAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTTCACAGTTTCTTCCTGCGGATCTaGGGCTTCTTCACCGGCCGC +
Preference number: 5 (lower is better)
Translates to: QMPTGGQVQPRHVVLLHSFFLRI*GFFTGR
Trigger: GCGGCCGGTGAAGAAGCCCAAGATCCGCAGGAAGAA...ACTGTGAAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CAA 90 bp GGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCCACCCTCTTCTTCCCTaGAGTGGCTTTAACTCCCCG +
Preference number: 5 (lower is better)
Translates to: GFNSPGGWNLRPCTSQVSHPLLP*SGFNSP
Trigger: CGGGGAGTTAAAGCCACTCAAGGGAAGAAGAGGGTG...GGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CAA 90 bp TTCTTCACAGTGATGCATCTGCTCAAGACTCCTGACTCCTGCCCACCCCAAACACCCTGCAGCCTCGGCTaGGCCATGAGGAGGTCACCC +
Preference number: 5 (lower is better)
Translates to: FFTVMHLLKTPDSCPPQTPCSLG*AMRRSP
Trigger: GGGTGACCTCCTCATGGCCAAGCCGAGGCTGCAGGG...TGTTTGGGGTGGGCAGGAGTCAGGAGTCTTGAGCAGATGCATCACTGTGAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CAA 90 bp GCCACTGCGCGTAGCCCCTCTTTCCTACTGTTTAAACCCCATGGCTCCTCTGTCCCAGCATGGTGGCGCTaGCCTCTAGTCCCAGCTACT +
Preference number: 5 (lower is better)
Translates to: ATARSPSFLLFKPHGSSVPAWWR*PLVPAT
Trigger: AGTAGCTGGGACTAGAGGCAAGCGCCACCATGCTGG...GACAGAGGAGCCATGGGGTTTAAACAGTAGGAAAGAGGGGCTACGCGCAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CAA 90 bp TTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGAGCTCAACGGAGCACTaGGGAGGCCAGATGAGGAGA +
Preference number: 5 (lower is better)
Translates to: LSGFNSPGGWNLRPCTSQSSTEH*GGQMRR
Trigger: TCTCCTCATCTGGCCTCCCAAGTGCTCCGTTGAGCT...CTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CAA 90 bp GCCACAAGACATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGCCGTGTGTGTCTTTCTaGACCTTTGTGGCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: ATRHGALRLSREGSERREPCVSF*TFVAAL
Trigger: GAGAGCAGCCACAAAGGTCAAGAAAGACACACACGG...CTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATGTCTTGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS GCA 90 bp ATGTTCTCCTCCCCATTCCGGCTACCCGACAAGGAGGGGTTCTGCTaGAGGACAGAGGTGTTCTCCTTCTCGGCTCCAGAATCCTCCATG +
Preference number: 5 (lower is better)
Translates to: MFSSPFRLPDKEGFC*RTEVFSFSAPESSM
Trigger: CATGGAGGATTCTGGAGCCGAGAAGGAGAACACCTCTGTCCTGCAGCAGAACCCCTCCTTGTCGGGTAGCCGGAATGGGGAGGAGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000456846.6
ENST00000465926.5
CDS GCA 90 bp ATGATGTTCTCCTCCCCATTCCGGCTACCCGACAAGGAGGGGTTCTaGTGCAGGACAGAGGTGTTCTCCTTCTCGGCTCCAGAATCCTCC +
Preference number: 5 (lower is better)
Translates to: MMFSSPFRLPDKEGF*CRTEVFSFSAPESS
Trigger: GGAGGATTCTGGAGCCGAGAAGGAGAACACCTCTGTCCTGCAGCAGAACCCCTCCTTGTCGGGTAGCCGGAATGGGGAGGAGAACATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372977.8
ENST00000372982.8
ENST00000456846.6
ENST00000465926.5
ENST00000494547.5
CDS GCA 90 bp ATGTTCTCCTCCCCATTCCGGCTACCCGACAAGGAGGGGTTCTGCTaGAGGACAGAGGTGTTCTCCTTCTCGGCTCCAGAATCCTCCTGT +
Preference number: 5 (lower is better)
Translates to: MFSSPFRLPDKEGFC*RTEVFSFSAPESSC
Trigger: ACAGGAGGATTCTGGAGCCGAGAAGGAGAACACCTCTGTCCTGCAGCAGAACCCCTCCTTGTCGGGTAGCCGGAATGGGGAGGAGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000494547.5
CDS-3UTR CAA 90 bp CTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGCTCCTCTGAGACCGTTTaGCATAAGCAGGGAGAGTGT +
Preference number: 5 (lower is better)
Translates to: LPGRVESAPLYKPGFLLSSSETV*HKQGEC
Trigger: ACACTCTCCCTGCTTATGCAAAACGGTCTCAGAGGA...GCTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CAA 90 bp CTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGCCGACGCTCTAGGCTCTaGTCAGAGAAAACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: LPGRVESAPLYKPGFLLSRRSRL*SEKTSS
Trigger: AGAAGAGGTTTTCTCTGACAAGAGCCTAGAGCGTCG...GCTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CAA 90 bp CAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTTCACAGTGGGATTGGCCACGGCTaGAATGTGGGGCTGTGTTCA +
Preference number: 5 (lower is better)
Translates to: QMPTGGQVQPRHVVLLHSGIGHG*NVGLCS
Trigger: TGAACACAGCCCCACATTCAAGCCGTGGCCAATCCC...ACTGTGAAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CAA 90 bp TCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCACGGCAGAACGCACAGAGCCTGGGTTaGCTTCCGTGTGTGTCTTTC +
Preference number: 5 (lower is better)
Translates to: SRGRALRGGRVFQRARQNAQSLG*LPCVSF
Trigger: GAAAGACACACACGGAAGCAAACCCAGGCTCTGTGC...GTTCTGCCGTGCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS TCA 90 bp TGCGGATCTTGGGCTTCTTCACCGGCCGCAGATAAGGGTTATCGATaGTGTTCTCCTCCCCATTCCGGCTACCCGACAAGGAGGGGTTCT +
Preference number: 5 (lower is better)
Translates to: CGSWASSPAADKGYR*CSPPHSGYPTRRGS
Trigger: AGAACCCCTCCTTGTCGGGTAGCCGGAATGGGGAGGAGAACATCATCGATAACCCTTATCTGCGGCCGGTGAAGAAGCCCAAGATCCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372977.8
ENST00000372982.8
ENST00000456846.6
ENST00000465926.5
ENST00000494547.5
CDS GCA 90 bp CTCTGTCAGCGTTTCCACGGATGCTTTCTCGGCACTCTCAAACCCTaGCTCTGTCAGCAAGGAGCTCACAACCACCTGCAGGGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LCQRFHGCFLGTLKP*LCQQGAHNHLQGSP
Trigger: AGGAGAACCCTGCAGGTGGTTGTGAGCTCCTTGCTGACAGAGGCAGGGTTTGAGAGTGCCGAGAAAGCATCCGTGGAAACGCTGACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000372977.8
ENST00000372978.7
ENST00000372982.8
ENST00000456846.6
ENST00000465926.5
ENST00000472818.5
ENST00000482432.1
ENST00000482926.1
ENST00000486070.1
ENST00000494547.5
CDS-3UTR CAA 90 bp GCCACAAGACATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGGGGAGAGTGTCCACATaGAAACCCATCTCAACAAGT +
Preference number: 5 (lower is better)
Translates to: ATRHGALRLSREGSERREGRVST*KPISTS
Trigger: ACTTGTTGAGATGGGTTTCAATGTGGACACTCTCCC...CTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATGTCTTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CAA 90 bp CCGTGTGTGTCTTTCTTGACCTTTGTGGCTGCTCTCCTGGTGACCGATCTCCTTTTCTTCCTGCGGATCTaGGGCTTCTTCACCGGCCGC +
Preference number: 5 (lower is better)
Translates to: PCVSFLTFVAALLVTDLLFFLRI*GFFTGR
Trigger: GCGGCCGGTGAAGAAGCCCAAGATCCGCAGGAAGAA...AAGGAGATCGGTCACCAGGAGAGCAGCCACAAAGGTCAAGAAAGACACACACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CAA 90 bp TTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCCACCCTCTTCTTCCCTaGAGTGGCTTTAACTCCCCG +
Preference number: 5 (lower is better)
Translates to: FNSPGGWNLRPCTSQVSFHPLLP*SGFNSP
Trigger: CGGGGAGTTAAAGCCACTCAAGGGAAGAAGAGGGTG...GAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CAA 90 bp GTTTCCGACACGTTGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACCCCTGCAGCCTCGGCTaGGCCATGAGGAGGTCACCC +
Preference number: 5 (lower is better)
Translates to: VSDTLREYKELFISSTEHPCSLG*AMRRSP
Trigger: GGGTGACCTCCTCATGGCCAAGCCGAGGCTGCAGGG...GTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CAA 90 bp CAGGAGGAGAGTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGCCTGTTTCCGACACGTaGAGGGAGTACAAAGAACTT +
Preference number: 5 (lower is better)
Translates to: QEESAAPLQGAFVKCRREPVSDT*REYKEL
Trigger: AAGTTCTTTGTACTCCCTCAACGTGTCGGAAACAGG...CTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCACTCTCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CAA 90 bp AACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCATGTAATCTCAACACTTaGGAAGGCCAAGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: NSPGGWNLRPCTSQVSFSCNLNT*EGQGGW
Trigger: CCACCCGCCTTGGCCTTCCAAAGTGTTGAGATTACA...TGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CAA 90 bp CGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGGACAGGTGCAGCCCCGACACTGTGTCTTCACCATTaGTGTGCTGGTGGTTACACA +
Preference number: 5 (lower is better)
Translates to: RFRELSSNADGRTGAAPTLCLHH*CAGGYT
Trigger: TGTGTAACCACCAGCACACAAATGGTGAAGACACAG...TGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CAA 90 bp TGCTCTCCTGGTGACCGATCTCCTTGGGGAGCACTTGGCAGCTTAGGGCAAAGTGCACAGAGCCTGGGTTaGCTTCCGTGTGTGTCTTTC +
Preference number: 5 (lower is better)
Translates to: CSPGDRSPWGALGSLGQSAQSLG*LPCVSF
Trigger: GAAAGACACACACGGAAGCAAACCCAGGCTCTGTGC...ACTTTGCCCTAAGCTGCCAAGTGCTCCCCAAGGAGATCGGTCACCAGGAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CAA 90 bp CACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGAGGGCATCCTCTGAGACCGTTTaGCATAAGCAGGGAGAGTGT +
Preference number: 5 (lower is better)
Translates to: HSGSRGRALRGGRVFQRASSETV*HKQGEC
Trigger: ACACTCTCCCTGCTTATGCAAAACGGTCTCAGAGGA...TGCCCTCTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CAA 90 bp TTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGTCCTCTGAGACCGTTTaGCATAAGCAGGGAGAGTGT +
Preference number: 5 (lower is better)
Translates to: LSGFNSPGGWNLRPCTSQSSETV*HKQGEC
Trigger: ACACTCTCCCTGCTTATGCAAAACGGTCTCAGAGGA...CTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CAA 90 bp AACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCACCCACAGGATACAAATaGGTTGGACAGACTCAGACC +
Preference number: 5 (lower is better)
Translates to: NSPGGWNLRPCTSQVSFSPTGYK*VGQTQT
Trigger: GGTCTGAGTCTGTCCAACCAATTTGTATCCTGTGGG...TGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CAA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTGCCGCGTCGGCCATCTaGTTCTGGCGTAGTGTGCGC +
Preference number: 5 (lower is better)
Translates to: ANVPGHILSFEPLFHQQAAASAI*FWRSVR
Trigger: GCGCACACTACGCCAGAACAAGATGGCCGACGCGGC...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR CAA 90 bp TTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTAACAGGATCCCTCTCTaGTGCCTCCCATCTTCACAC +
Preference number: 5 (lower is better)
Translates to: LTPREGGICAPVQARFPSNRIPL*CLPSSH
Trigger: GTGTGAAGATGGGAGGCACAAGAGAGGGATCCTGTT...AGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465926.5
CDS GCA 90 bp CATGTACTCACAGCTCTGCAGCATCTCTGTCAGCGTTTCCACGGATaGTTTCTCGGCACTCTCAAACCCTGCCTCTGTCAGCAAGGAGCT +
Preference number: 5 (lower is better)
Translates to: HVLTALQHLCQRFHG*FLGTLKPCLCQQGA
Trigger: AGCTCCTTGCTGACAGAGGCAGGGTTTGAGAGTGCCGAGAAAGCATCCGTGGAAACGCTGACAGAGATGCTGCAGAGCTGTGAGTACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486070.1
CDS-3UTR CAA 90 bp GACATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTTCCTCTGAGACCGTTTaGCATAAGCAGGGAGAGTGT +
Preference number: 5 (lower is better)
Translates to: DMVHSGSRGRALRGGRVFSSETV*HKQGEC
Trigger: ACACTCTCCCTGCTTATGCAAAACGGTCTCAGAGGA...AAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CAA 90 bp GTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTTGTCTCTTCCATTTGTaGCATCTCCAGTTCAGACGG +
Preference number: 5 (lower is better)
Translates to: VALTPREGGICAPVQARFCLFHL*HLQFRR
Trigger: CCGTCTGAACTGGAGATGCAACAAATGGAAGAGACA...AAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CAA 90 bp ATGCATCTGCTCAAGACTCCTGACTCCTGCCCACCCCAAACAAAGCTGTGCTGTAGGCAGGAGAATCACTaGGACCCAGGGTTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: MHLLKTPDSCPPQTKLCCRQENH*DPGLLR
Trigger: TCTCAGCAACCCTGGGTCCAAGTGATTCTCCTGCCT...ACAGCACAGCTTTGTTTGGGGTGGGCAGGAGTCAGGAGTCTTGAGCAGATGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CAA 90 bp CTTCCCTTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACACCTGTTTCCGACACGTaGAGGGAGTACAAAGAACTT +
Preference number: 5 (lower is better)
Translates to: LPLSGFNSPGGWNLRPCTPVSDT*REYKEL
Trigger: AAGTTCTTTGTACTCCCTCAACGTGTCGGAAACAGG...TGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CAA 90 bp CACACATTCCTCACAGGGGCAATAAATGGTAAATCTCTCAGGAGGAGAGTGCTGGCAGAACGCCTCAGCTaGGCTCACTCCTGCCCATCC +
Preference number: 5 (lower is better)
Translates to: HTFLTGAINGKSLRRRVLAERLS*AHSCPS
Trigger: GGATGGGCAGGAGTGAGCCAAGCTGAGGCGTTCTGC...CAGCACTCTCCTCCTGAGAGATTTACCATTTATTGCCCCTGTGAGGAATGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS TCA 90 bp ACAAGCTTTTGGACTGGACTCTGCCACGTGACAGTCAGTAGGAACTaGCTCCGTGCTTTACACCACGCGCAGTCCCAGTGCTTCATCACT +
Preference number: 5 (lower is better)
Translates to: TSFWTGLCHVTVSRN*LRALHHAQSQCFIT
Trigger: AGTGATGAAGCACTGGGACTGCGCGTGGTGTAAAGCACGGAGTCAGTTCCTACTGACTGTCACGTGGCAGAGTCCAGTCCAAAAGCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS GCA 90 bp TTGGGGTTGACTCCAAGGCCAAGTGTTTCCATGTACTCACAGCTCTaGAGCATCTCTGTCAGCGTTTCCACGGATGCTTTCTCGGCACTC +
Preference number: 5 (lower is better)
Translates to: LGLTPRPSVSMYSQL*SISVSVSTDAFSAL
Trigger: GAGTGCCGAGAAAGCATCCGTGGAAACGCTGACAGAGATGCTGCAGAGCTGTGAGTACATGGAAACACTTGGCCTTGGAGTCAACCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486070.1
CDS CCA 90 bp CGGACAGTGTGGGCTGGGTCCTGGCTGTGTGCTCACAGTAAGACTTaGCACTTCTCCCAATTTCTGAAATGTAGCTCTGCAGCATCTCTG +
Preference number: 5 (lower is better)
Translates to: RTVWAGSWLCAHSKT*HFSQFLKCSSAASL
Trigger: CAGAGATGCTGCAGAGCTACATTTCAGAAATTGGGAGAAGTGCCAAGTCTTACTGTGAGCACACAGCCAGGACCCAGCCCACACTGTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000372977.8
ENST00000372978.7
ENST00000372982.8
ENST00000456846.6
ENST00000465926.5
ENST00000472818.5
ENST00000482432.1
ENST00000482926.1
ENST00000494547.5
CDS-3UTR CAA 90 bp TTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTGGGAGAGTGTCCACATaGAAACCCATCTCAACAAGT +
Preference number: 5 (lower is better)
Translates to: LTPREGGICAPVQARFPSGRVST*KPISTS
Trigger: ACTTGTTGAGATGGGTTTCAATGTGGACACTCTCCC...AGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372977.8
ENST00000465926.5
ENST00000494547.5
CDS-3UTR CAA 90 bp ATGGTGCACTCAGGCTCTCGAGGGAGGGCTCTGAGAGGAGGGAGAGTATTTCAGTGTCTCTTCCATTTGTaGCATCTCCAGTTCAGACGG +
Preference number: 5 (lower is better)
Translates to: MVHSGSRGRALRGGRVFQCLFHL*HLQFRR
Trigger: CCGTCTGAACTGGAGATGCAACAAATGGAAGAGACA...CTGAAATACTCTCCCTCCTCTCAGAGCCCTCCCTCGAGAGCCTGAGTGCACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CAA 90 bp CAGGAGGAGAGTGCTGCCCCGCTTCAGGGAGCTTTCGTCAAATGCCGACGGGAGACTTTCCCTGGTCTCTaGAGTTTCAAAGGAATCAAA +
Preference number: 5 (lower is better)
Translates to: QEESAAPLQGAFVKCRRETFPGL*SFKGIK
Trigger: TTTGATTCCTTTGAAACTCAAGAGACCAGGGAAAGT...CTCCCGTCGGCATTTGACGAAAGCTCCCTGAAGCGGGGCAGCACTCTCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CAA 90 bp CAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTTCACAGTCCTGGGCACAGGAAGTaGATGTTCGCAGAATTAAGA +
Preference number: 5 (lower is better)
Translates to: QMPTGGQVQPRHVVLLHSPGHRK*MFAELR
Trigger: TCTTAATTCTGCGAACATCAACTTCCTGTGCCCAGG...ACTGTGAAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CAA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTCTGCCCAGGCTGGTCTaGAACTCCCAGGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: ANVPGHILSFEPLFHQQALPRLV*NSQAQV
Trigger: CACTTGAGCCTGGGAGTTCAAGACCAGCCTGGGCAG...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR CAA 90 bp TTTCGTCAAATGCCGACGGGAGGACAGGTGCAGCCCCGACATGTCGTTCTTCTTTGTCTCTTCCATTTGTaGCATCTCCAGTTCAGACGG +
Preference number: 5 (lower is better)
Translates to: FRQMPTGGQVQPRHVVLLCLFHL*HLQFRR
Trigger: CCGTCTGAACTGGAGATGCAACAAATGGAAGAGACA...AAGAAGAACGACATGTCGGGGCTGCACCTGTCCTCCCGTCGGCATTTGACGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CAA 90 bp ACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAAGCCAGGTTTCCTTCTCAGCTGAATGCAAGGGTTTaGATATTGCACCACAGTTAT +
Preference number: 5 (lower is better)
Translates to: TPREGGICAPVQARFPSQLNARV*ILHHSY
Trigger: ATAACTGTGGTGCAATATCAAAACCCTTGCATTCAG...CTGAGAAGGAAACCTGGCTTGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS TCA 90 bp GAACCACTCTTTCATCAACAAGCTTTTGGACTGGACTCTGCCACGTaGCAGTCAGTAGGAACTGACTCCGTGCTTTACACCACGCGCAGT +
Preference number: 5 (lower is better)
Translates to: EPLFHQQAFGLDSAT*QSVGTDSVLYTTRS
Trigger: ACTGCGCGTGGTGTAAAGCACGGAGTCAGTTCCTACTGACTGTCACGTGGCAGAGTCCAGTCCAAAAGCTTGTTGATGAAAGAGTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR CAA 90 bp GGTTTGCTTCCGTGTGTGTCTTTCTTGACCTTTGTGGCTGCTCTCCTGGTGACCGGGAGAGTGTCCACATaGAAACCCATCTCAACAAGT +
Preference number: 5 (lower is better)
Translates to: GLLPCVSFLTFVAALLVTGRVST*KPISTS
Trigger: ACTTGTTGAGATGGGTTTCAATGTGGACACTCTCCC...GGTCACCAGGAGAGCAGCCACAAAGGTCAAGAAAGACACACACGGAAGCAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS-3UTR CAA 90 bp GACCGATCTCCTTGGGGAGCACTTGGCAGCTTAGGGCAAAGTCTCACAATTCTCTGTCTCTTCCATTTGTaGCATCTCCAGTTCAGACGG +
Preference number: 5 (lower is better)
Translates to: DRSPWGALGSLGQSLTILCLFHL*HLQFRR
Trigger: CCGTCTGAACTGGAGATGCAACAAATGGAAGAGACA...GAGAATTGTGAGACTTTGCCCTAAGCTGCCAAGTGCTCCCCAAGGAGATCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR CAA 90 bp ATGCATCTGCTCAAGACTCCTGACTCCTGCCCACCCCAAACAAAGCTGTGCTGTTGTCTCTTCCATTTGTaGCATCTCCAGTTCAGACGG +
Preference number: 5 (lower is better)
Translates to: MHLLKTPDSCPPQTKLCCCLFHL*HLQFRR
Trigger: CCGTCTGAACTGGAGATGCAACAAATGGAAGAGACA...ACAGCACAGCTTTGTTTGGGGTGGGCAGGAGTCAGGAGTCTTGAGCAGATGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CAA 90 bp CTTCCCTTGAGTGGCTTTAACTCCCCGGGAGGGTGGAATCTGCGCCCCTGTACAACACAGGTCTGGAGTTaGCATTTAAAAATACTCCAG +
Preference number: 5 (lower is better)
Translates to: LPLSGFNSPGGWNLRPCTTQVWS*HLKILQ
Trigger: CTGGAGTATTTTTAAATGCAAACTCCAGACCTGTGT...TGTACAGGGGCGCAGATTCCACCCTCCCGGGGAGTTAAAGCCACTCAAGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CAA 90 bp TTCTTCACAGTGATGCATCTGCTCAAGACTCCTGACTCCTGCCCACCCCAAACAGGGAGAGTGTCCACATaGAAACCCATCTCAACAAGT +
Preference number: 5 (lower is better)
Translates to: FFTVMHLLKTPDSCPPQTGRVST*KPISTS
Trigger: ACTTGTTGAGATGGGTTTCAATGTGGACACTCTCCC...TGTTTGGGGTGGGCAGGAGTCAGGAGTCTTGAGCAGATGCATCACTGTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CAA 90 bp GAAGGGGTAAGACTTGGCAGTTCCCAAGCACACATTCCTCACAGGGGCAATAAATCCTCTGAGACCGTTTaGCATAAGCAGGGAGAGTGT +
Preference number: 5 (lower is better)
Translates to: EGVRLGSSQAHIPHRGNKSSETV*HKQGEC
Trigger: ACACTCTCCCTGCTTATGCAAAACGGTCTCAGAGGA...TTTATTGCCCCTGTGAGGAATGTGTGCTTGGGAACTGCCAAGTCTTACCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372977.8
ENST00000494547.5
CDS-3UTR CAA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTTCCTCTGAGACCGTTTaGCATAAGCAGGGAGAGTGT +
Preference number: 5 (lower is better)
Translates to: ANVPGHILSFEPLFHQQASSETV*HKQGEC
Trigger: ACACTCTCCCTGCTTATGCAAAACGGTCTCAGAGGA...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR CAA 90 bp TATCCTGAAATACACGCTGGACAAACAGTCTTCCTTGTAATAAGCACAGCAGCAAGGCAGGAGAATCTCTaGAACCCGGGAGGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: YPEIHAGQTVFLVISTAARQENL*NPGGGG
Trigger: TCCTCCACCTCCCGGGTTCAAGAGATTCTCCTGCCT...TGCTGCTGTGCTTATTACAAGGAAGACTGTTTGTCCAGCGTGTATTTCAGGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CAA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTGGGAGAGTGTCCACATaGAAACCCATCTCAACAAGT +
Preference number: 5 (lower is better)
Translates to: ANVPGHILSFEPLFHQQAGRVST*KPISTS
Trigger: ACTTGTTGAGATGGGTTTCAATGTGGACACTCTCCC...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR CAA 90 bp GCCAAAGGGGAATACATGAAGCTAAATATGGACGTTAGGATTCTAATTTGGGAACCAGCATGGTGGCGCTaGCCTCTAGTCCCAGCTACT +
Preference number: 5 (lower is better)
Translates to: AKGEYMKLNMDVRILIWEPAWWR*PLVPAT
Trigger: AGTAGCTGGGACTAGAGGCAAGCGCCACCATGCTGG...TTCCCAAATTAGAATCCTAACGTCCATATTTAGCTTCATGTATTCCCCTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CAA 90 bp GTTTCCGACACGTTGAGGGAGTACAAAGAACTTTTCATCAGCTCAACGGAGCACCAGGATACAAATTGGTaGGACAGACTCAGACCTGCT +
Preference number: 5 (lower is better)
Translates to: VSDTLREYKELFISSTEHQDTNW*DRLRPA
Trigger: AGCAGGTCTGAGTCTGTCCAACCAATTTGTATCCTG...GTGCTCCGTTGAGCTGATGAAAAGTTCTTTGTACTCCCTCAACGTGTCGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CAA 90 bp GGTTTGCTTCCGTGTGTGTCTTTCTTGACCTTTGTGGCTGCTCTCCTGGTGACCTCATGTAAAATTCTTTaGAGGAGAGACCAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: GLLPCVSFLTFVAALLVTSCKIL*RRDQEK
Trigger: CTTCTCCTGGTCTCTCCTCAAAAGAATTTTACATGA...GGTCACCAGGAGAGCAGCCACAAAGGTCAAGAAAGACACACACGGAAGCAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372982.8
CDS-3UTR CAA 90 bp GCCAATGTGCCCGGCCACATTCTGAGTTTTGAACCACTCTTTCATCAACAAGCTTTCATCAACAAGCTTTaGGACTGGACTCTGCCACGT +
Preference number: 5 (lower is better)
Translates to: ANVPGHILSFEPLFHQQAFINKL*DWTLPR
Trigger: ACGTGGCAGAGTCCAGTCCAAAAGCTTGTTGATGAA...AGCTTGTTGATGAAAGAGTGGTTCAAAACTCAGAATGTGGCCGGGCACATTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS-3UTR CAA 90 bp TATATTGTAGGTAGCCCCAAACATTGGAAGAGAGCCCACAACAAGGAAGTAGCTTCCTCTGAGACCGTTTaGCATAAGCAGGGAGAGTGT +
Preference number: 5 (lower is better)
Translates to: YIVGSPKHWKRAHNKEVASSETV*HKQGEC
Trigger: ACACTCTCCCTGCTTATGCAAAACGGTCTCAGAGGA...AGCTACTTCCTTGTTGTGGGCTCTCTTCCAATGTTTGGGGCTACCTACAATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472818.5
CDS-3UTR CAA 90 bp GAAGGGGTAAGACTTGGCAGTTCCCAAGCACACATTCCTCACAGGGGCAATAAAATGTTAAGAATGAAGTaGTTCTCCCCACAGGATACA +
Preference number: 5 (lower is better)
Translates to: EGVRLGSSQAHIPHRGNKMLRMK*FSPQDT
Trigger: TGTATCCTGTGGGGAGAACAACTTCATTCTTAACAT...TTTATTGCCCCTGTGAGGAATGTGTGCTTGGGAACTGCCAAGTCTTACCCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CAA 90 bp CACACATTCCTCACAGGGGCAATAAATGGTAAATCTCTCAGGAGGAGAGTGCTGGTTCACTTCCACGTGTaGTTACATTTTTCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: HTFLTGAINGKSLRRRVLVHFHV*LHFSSL
Trigger: CAAGGAAGAAAAATGTAACAACACGTGGAAGTGAAC...CAGCACTCTCCTCCTGAGAGATTTACCATTTATTGCCCCTGTGAGGAATGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CAA 90 bp GCCAAAGGGGAATACATGAAGCTAAATATGGACGTTAGGATTCTAATTTGGGAACGACGCTCTAGGCTCTaGTCAGAGAAAACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: AKGEYMKLNMDVRILIWERRSRL*SEKTSS
Trigger: AGAAGAGGTTTTCTCTGACAAGAGCCTAGAGCGTCG...TTCCCAAATTAGAATCCTAACGTCCATATTTAGCTTCATGTATTCCCCTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372977.8
CDS-3UTR CAA 90 bp ATTTGGCCCATAGGCCACAATTTACCAACCCTTAATCTAAGAAGAACAAAAACTAAGATGGTTTACCTTTaGGTGACTGAATTTCACATG +
Preference number: 5 (lower is better)
Translates to: IWPIGHNLPTLNLRRTKTKMVYL*VTEFHM
Trigger: CATGTGAAATTCAGTCACCAAAAGGTAAACCATCTT...AGTTTTTGTTCTTCTTAGATTAAGGGTTGGTAAATTGTGGCCTATGGGCCAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472818.5
CDS CCA 72 bp TTCCCGATCTCGTTCCGGAGCCACCGGCCCCAGCTGTaGCCGCCGCGTCGGCCATCTTGTTCTGGCGTAGTG +
Preference number: 6 (lower is better)
Translates to: FPISFRSHRPQL*PPRRPSCSGVV
Trigger: CACTACGCCAGAACAAGATGGCCGACGCGGCGGCCACAGCTGGGGCCGGTGGCTCCGGAACGAGATCGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372977.8
ENST00000372978.7
ENST00000372982.8
ENST00000456846.6
ENST00000472818.5
ENST00000494547.5
CDS TCA 72 bp TTCTGCCCTGCAGTGAGGGCCTTGGGGGTCACTGGCTaGTTGGTCACCGGAGGAGCAGTGATGACCATCCTC +
Preference number: 6 (lower is better)
Translates to: FCPAVRALGVTG*LVTGGAVMTIL
Trigger: GAGGATGGTCATCACTGCTCCTCCGGTGACCAATCAGCCAGTGACCCCCAAGGCCCTCACTGCAGGGCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000372977.8
ENST00000372978.7
ENST00000372982.8
ENST00000456846.6
ENST00000465926.5
ENST00000482926.1
ENST00000494547.5
CDS GCA 72 bp CTGAGTCTCGCCTGTCTTGGCCATGAAACGGGTAAGTaGCCGCTCCACATCGCGCCTCTGGGATGCAGCCTT +
Preference number: 6 (lower is better)
Translates to: LSLACLGHETGK*PLHIAPLGCSL
Trigger: AAGGCTGCATCCCAGAGGCGCGATGTGGAGCGGGCACTTACCCGTTTCATGGCCAAGACAGGCGAGACTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372977.8
ENST00000372982.8
ENST00000456846.6
ENST00000465926.5
ENST00000494547.5
CDS GCA 72 bp TCCTCCCCATTCCGGCTACCCGACAAGGAGGGGTTCTaGTGCAGGACAGAGGTGTTCTCCTTCTCGGCTCCA +
Preference number: 6 (lower is better)
Translates to: SSPFRLPDKEGF*CRTEVFSFSAP
Trigger: TGGAGCCGAGAAGGAGAACACCTCTGTCCTGCAGCAGAACCCCTCCTTGTCGGGTAGCCGGAATGGGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372977.8
ENST00000372982.8
ENST00000456846.6
ENST00000465926.5
ENST00000494547.5
CDS CCA 72 bp TCGGTTCTGCCCTGCAGTGAGGGCCTTGGGGGTCACTaGCTGATTGGTCACCGGAGGAGCAGTGATGACCAT +
Preference number: 6 (lower is better)
Translates to: SVLPCSEGLGGH*LIGHRRSSDDH
Trigger: ATGGTCATCACTGCTCCTCCGGTGACCAATCAGCCAGTGACCCCCAAGGCCCTCACTGCAGGGCAGAACCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000372977.8
ENST00000372978.7
ENST00000372982.8
ENST00000456846.6
ENST00000465926.5
ENST00000482926.1
ENST00000494547.5
CDS TCA 72 bp TGGACTGGACTCTGCCACGTGACAGTCAGTAGGAACTaGCTCCGTGCTTTACACCACGCGCAGTCCCAGTGC +
Preference number: 6 (lower is better)
Translates to: WTGLCHVTVSRN*LRALHHAQSQC
Trigger: GCACTGGGACTGCGCGTGGTGTAAAGCACGGAGTCAGTTCCTACTGACTGTCACGTGGCAGAGTCCAGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS TCA 72 bp TGGGCTTCTTCACCGGCCGCAGATAAGGGTTATCGATaGTGTTCTCCTCCCCATTCCGGCTACCCGACAAGG +
Preference number: 6 (lower is better)
Translates to: WASSPAADKGYR*CSPPHSGYPTR
Trigger: CCTTGTCGGGTAGCCGGAATGGGGAGGAGAACATCATCGATAACCCTTATCTGCGGCCGGTGAAGAAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372977.8
ENST00000372982.8
ENST00000456846.6
ENST00000465926.5
ENST00000494547.5
CDS GCA 72 bp GTAGCTCTGCAGCATCTCTGTCAGCGTTTCCACGGATaGTTTCTCGGCACTCTCAAACCCTGCCTCTGTCAG +
Preference number: 6 (lower is better)
Translates to: VALQHLCQRFHG*FLGTLKPCLCQ
Trigger: CTGACAGAGGCAGGGTTTGAGAGTGCCGAGAAAGCATCCGTGGAAACGCTGACAGAGATGCTGCAGAGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000372977.8
ENST00000372978.7
ENST00000372982.8
ENST00000456846.6
ENST00000465926.5
ENST00000472818.5
ENST00000482432.1
ENST00000482926.1
ENST00000494547.5
CDS GCA 72 bp ACAGCTCTGCAGCATCTCTGTCAGCGTTTCCACGGATaGTTTCTCGGCACTCTCAAACCCTGCCTCTGTCAG +
Preference number: 6 (lower is better)
Translates to: TALQHLCQRFHG*FLGTLKPCLCQ
Trigger: CTGACAGAGGCAGGGTTTGAGAGTGCCGAGAAAGCATCCGTGGAAACGCTGACAGAGATGCTGCAGAGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486070.1
CDS TCA 72 bp GCCTGGGTGACGGAGCGAGACTCTATCATGCTGATATaGAGAGCAAGGTTCTCTGTGTCTGTCTGTTCATCC +
Preference number: 6 (lower is better)
Translates to: AWVTERDSIMLI*RARFSVSVCSS
Trigger: GGATGAACAGACAGACACAGAGAACCTTGCTCTTCATATCAGCATGATAGAGTCTCGCTCCGTCACCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000494547.5
CDS GCA 72 bp CGGAGGAGCAGTGATGACCATCCTCTGAGACCGTTTTaGATAAGCAGGGAGAGTGTCCACATTGAAACCCAT +
Preference number: 6 (lower is better)
Translates to: RRSSDDHPLRPF*ISRESVHIETH
Trigger: ATGGGTTTCAATGTGGACACTCTCCCTGCTTATGCAAAACGGTCTCAGAGGATGGTCATCACTGCTCCTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000372977.8
ENST00000372978.7
ENST00000372982.8
ENST00000456846.6
ENST00000465926.5
ENST00000482926.1
ENST00000494547.5
CDS GCA 72 bp ACTCCAAGGCCAAGTGTTTCCATGTACTCACAGCTCTaGAGCATCTCTGTCAGCGTTTCCACGGATGCTTTC +
Preference number: 6 (lower is better)
Translates to: TPRPSVSMYSQL*SISVSVSTDAF
Trigger: GAAAGCATCCGTGGAAACGCTGACAGAGATGCTGCAGAGCTGTGAGTACATGGAAACACTTGGCCTTGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486070.1
CDS CCA 72 bp TGGGCTGGGTCCTGGCTGTGTGCTCACAGTAAGACTTaGCACTTCTCCCAATTTCTGAAATGTAGCTCTGCA +
Preference number: 6 (lower is better)
Translates to: WAGSWLCAHSKT*HFSQFLKCSSA
Trigger: TGCAGAGCTACATTTCAGAAATTGGGAGAAGTGCCAAGTCTTACTGTGAGCACACAGCCAGGACCCAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000372977.8
ENST00000372978.7
ENST00000372982.8
ENST00000456846.6
ENST00000465926.5
ENST00000472818.5
ENST00000482432.1
ENST00000482926.1
ENST00000494547.5
CDS CAA 90 bp GTCTGTCTGTTCATCCTGCTCCGAGGAATCTGTCTCTTCCATTTGTaGCATCTCCAGTTCAGACGGAAGAAGAGCTGTCAGGTAGGGGAT +
Preference number: 6 (lower is better)
Translates to: VCLFILLRGICLFHL*HLQFRRKKSCQVGD
Trigger: ATCCCCTACCTGACAGCTCTTCTTCCGTCTGAACTGGAGATGCAACAAATGGAAGAGACAGATTCCTCGGAGCAGGATGAACAGACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372977.8
ENST00000372982.8
ENST00000456846.6
ENST00000494547.5
CDS CAA 90 bp TGTGTCTGTCTGTTCATCCTGCTCCGAGGAATCTGTCTCTTCCATTaGTTGCATCTCCAGTTCAGACGGAAGAAGAGCTGTCAGGTAGGG +
Preference number: 6 (lower is better)
Translates to: CVCLFILLRGICLFH*LHLQFRRKKSCQVG
Trigger: CCCTACCTGACAGCTCTTCTTCCGTCTGAACTGGAGATGCAACAAATGGAAGAGACAGATTCCTCGGAGCAGGATGAACAGACAGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372977.8
ENST00000372982.8
ENST00000456846.6
ENST00000494547.5
CDS CAA 90 bp CTCTCAAACACTATCACAAAGCAGGGCACAGAACTGATGTTGGGGTaGACTCCAAGGCCAAGTGTTTCCATGTACTCACAGCTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: LSNTITKQGTELMLG*TPRPSVSMYSQLCS
Trigger: GCTGCAGAGCTGTGAGTACATGGAAACACTTGGCCTTGGAGTCAACCCCAACATCAGTTCTGTGCCCTGCTTTGTGATAGTGTTTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486070.1
CDS CCA 72 bp TTCTCTAGAATGTATCTGGCTTCTTCCTGCGGATCTTaGGCTTCTTCACCGGCCGCAGATAAGGGTTATCGA +
Preference number: 6 (lower is better)
Translates to: FSRMYLASSCGS*ASSPAADKGYR
Trigger: TCGATAACCCTTATCTGCGGCCGGTGAAGAAGCCCAAGATCCGCAGGAAGAAGCCAGATACATTCTAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372982.8
ENST00000456846.6
CDS TCA 72 bp TTTCATCAACAAGCTTTTGGACTGGACTCTGCCACGTaGCAGTCAGTAGGAACTGACTCCGTGCTTTACACC +
Preference number: 6 (lower is better)
Translates to: FHQQAFGLDSAT*QSVGTDSVLYT
Trigger: GGTGTAAAGCACGGAGTCAGTTCCTACTGACTGTCACGTGGCAGAGTCCAGTCCAAAAGCTTGTTGATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372978.7
CDS GCA 72 bp CTTACGAGCAGTGATGACCATCCTCTGAGACCGTTTTaGATAAGCAGGGAGAGTGTCCACATTGAAACCCAT +
Preference number: 6 (lower is better)
Translates to: LTSSDDHPLRPF*ISRESVHIETH
Trigger: ATGGGTTTCAATGTGGACACTCTCCCTGCTTATGCAAAACGGTCTCAGAGGATGGTCATCACTGCTCGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472818.5
ENST00000482432.1
CDS CAA 72 bp TTCATCCTGCTCCGAGGAATCTGTCTCTTCCATTTGTaGCATCTCCAGTTCAGACGGAAGAAGAGCTGTCAG +
Preference number: 6 (lower is better)
Translates to: FILLRGICLFHL*HLQFRRKKSCQ
Trigger: CTGACAGCTCTTCTTCCGTCTGAACTGGAGATGCAACAAATGGAAGAGACAGATTCCTCGGAGCAGGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372977.8
ENST00000372982.8
ENST00000456846.6
ENST00000494547.5
CDS CAA 72 bp ACTATCACAAAGCAGGGCACAGAACTGATGTTGGGGTaGACTCCAAGGCCAAGTGTTTCCATGTACTCACAG +
Preference number: 6 (lower is better)
Translates to: TITKQGTELMLG*TPRPSVSMYSQ
Trigger: CTGTGAGTACATGGAAACACTTGGCCTTGGAGTCAACCCCAACATCAGTTCTGTGCCCTGCTTTGTGATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486070.1
CDS CAA 90 bp GTCTGTCTGTTCATCCTGCTCCGAGGAATCTGTCTCTTCCATTTGTaGCATCTCCAGTTCAGACGGAAGAAGAGATGGAAATGTGCTGAC +
Preference number: 6 (lower is better)
Translates to: VCLFILLRGICLFHL*HLQFRRKKRWKCAD
Trigger: GTCAGCACATTTCCATCTCTTCTTCCGTCTGAACTGGAGATGCAACAAATGGAAGAGACAGATTCCTCGGAGCAGGATGAACAGACAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465926.5
CDS CAA 90 bp TGTGTCTGTCTGTTCATCCTGCTCCGAGGAATCTGTCTCTTCCATTaGTTGCATCTCCAGTTCAGACGGAAGAAGAGATGGAAATGTGCT +
Preference number: 6 (lower is better)
Translates to: CVCLFILLRGICLFH*LHLQFRRKKRWKCA
Trigger: AGCACATTTCCATCTCTTCTTCCGTCTGAACTGGAGATGCAACAAATGGAAGAGACAGATTCCTCGGAGCAGGATGAACAGACAGACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465926.5
CDS CAA 72 bp TCAAACACTATCACAAAGCAGGGCACAGAACTGATGTaGGGGTTGACTCCAAGGCCAAGTGTTTCCATGTAC +
Preference number: 6 (lower is better)
Translates to: SNTITKQGTELM*GLTPRPSVSMY
Trigger: GTACATGGAAACACTTGGCCTTGGAGTCAACCCCAACATCAGTTCTGTGCCCTGCTTTGTGATAGTGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486070.1
CDS CAA 72 bp TTCATCCTGCTCCGAGGAATCTGTCTCTTCCATTTGTaGCATCTCCAGTTCAGACGGAAGAAGAGATGGAAA +
Preference number: 6 (lower is better)
Translates to: FILLRGICLFHL*HLQFRRKKRWK
Trigger: TTTCCATCTCTTCTTCCGTCTGAACTGGAGATGCAACAAATGGAAGAGACAGATTCCTCGGAGCAGGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465926.5