Pregenerated sensors for TAF12 (Homo sapiens)
Ensembl gene IDs: ENSG00000120656Ensembl transcript IDs: ENST00000263974.4, ENST00000373824.9, ENST00000471683.5, ENST00000495422.2
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CTTCAGTTGAGGGCCGTGAGAGAAGGTCACCCTACTCAATTCTTATaGCCGAGAAGCTGGACTCAAACTCCTGCTGATGTTATGGCCTCC | + |
Preference number: 1 (lower is better) Translates to: LQLRAVREGHPTQFL*PRSWTQTPADVMAS Trigger: GGAGGCCATAACATCAGCAGGAGTTTGAGTCCAGCTTCTCGGCCATAAGAATTGAGTAGGGTGACCTTCTCTCACGGCCCTCAACTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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3UTR CCA 90 bp | GCCGTGAGAGAAGGTCACCCTACTCAATTCTTATGGCCGAGAAGCTaGACTCAAACTCCTGCTGATGTTATGGCCTCCCTTGGGGTAAAA | + |
Preference number: 1 (lower is better) Translates to: AVREGHPTQFLWPRS*TQTPADVMASLGVK Trigger: TTTTACCCCAAGGGAGGCCATAACATCAGCAGGAGTTTGAGTCCAGCTTCTCGGCCATAAGAATTGAGTAGGGTGACCTTCTCTCACGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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3UTR TCA 90 bp | GAGTTTTTCTCAAACACCAAAATGAATAACGATGCTGCCACCTGCTaGCTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCT | + |
Preference number: 1 (lower is better) Translates to: EFFSNTKMNNDAATC*LESYNPGLLVLTPS Trigger: AGAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGTCAGCAGGTGGCAGCATCGTTATTCATTTTGGTGTTTGAGAAAAACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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3UTR-3UTR CCA 90 bp | ACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCTGGGATTTCAAATGCTCCTCTTTGAGATaGCAGGGAAAAGGGACCGGA | + |
Preference number: 2 (lower is better) Translates to: TRELQSRLACPDSLWDFKCSSLR*QGKGTG Trigger: TCCGGTCCCTTTTCCCTGCCATCTCAAAGAGGAGCA...TTTGAAATCCCAGAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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3UTR-3UTR GCA 90 bp | AGAGAAGGTCACCCTACTCAATTCTTATGGCCGAGAAGCTGGACTCAAACTCCTCTCTGGAAGATACATTaGTCCTCTTTGAGATGGCAG | + |
Preference number: 2 (lower is better) Translates to: REGHPTQFLWPRSWTQTPLWKIH*SSLRWQ Trigger: CTGCCATCTCAAAGAGGAGCAATGTATCTTCCAGAG...AGGAGTTTGAGTCCAGCTTCTCGGCCATAAGAATTGAGTAGGGTGACCTTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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3UTR-3UTR TCA 90 bp | CTGGGATTTCAAAGGTACCCTGTCTTTCGATTAATAACTTCTTTATTCTGGAAATACATTGCTCCTCTTTaGGATGGCAGGGAAAAGGGA | + |
Preference number: 2 (lower is better) Translates to: LGFQRYPVFRLITSLFWKYIAPL*DGREKG Trigger: TCCCTTTTCCCTGCCATCTCAAAGAGGAGCAATGTA...TTTCCAGAATAAAGAAGTTATTAATCGAAAGACAGGGTACCTTTGAAATCCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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3UTR-3UTR CAA 90 bp | TGCCACCTGCTGACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCTCTCTGGAAGATACATaGCTCCTCTTTGAGATGGCA | + |
Preference number: 3 (lower is better) Translates to: CHLLTRELQSRLACPDSLSLEDT*LLFEMA Trigger: TGCCATCTCAAAGAGGAGCAATGTATCTTCCAGAGA...GAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGTCAGCAGGTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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3UTR CCA 72 bp | AGGGCCGTGAGAGAAGGTCACCCTACTCAATTCTTATaGCCGAGAAGCTGGACTCAAACTCCTGCTGATGTT | + |
Preference number: 3 (lower is better) Translates to: RAVREGHPTQFL*PRSWTQTPADV Trigger: AACATCAGCAGGAGTTTGAGTCCAGCTTCTCGGCCATAAGAATTGAGTAGGGTGACCTTCTCTCACGGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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3UTR CCA 72 bp | GAAGGTCACCCTACTCAATTCTTATGGCCGAGAAGCTaGACTCAAACTCCTGCTGATGTTATGGCCTCCCTT | + |
Preference number: 3 (lower is better) Translates to: EGHPTQFLWPRS*TQTPADVMASL Trigger: AAGGGAGGCCATAACATCAGCAGGAGTTTGAGTCCAGCTTCTCGGCCATAAGAATTGAGTAGGGTGACCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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3UTR TCA 72 bp | TCAAACACCAAAATGAATAACGATGCTGCCACCTGCTaGCTAGAGAGCTACAATCCAGGCTTGCTTGTCCTG | + |
Preference number: 3 (lower is better) Translates to: SNTKMNNDAATC*LESYNPGLLVL Trigger: CAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGTCAGCAGGTGGCAGCATCGTTATTCATTTTGGTGTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR CCA 90 bp | TGCCACCTGCTGACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCGGCCATGGAGCCTTGTaGAGGGGTGCTGGCTGGTTC | + |
Preference number: 4 (lower is better) Translates to: CHLLTRELQSRLACPDSLGHGAL*RGAGWF Trigger: GAACCAGCCAGCACCCCTCCACAAGGCTCCATGGCC...GAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGTCAGCAGGTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR GCA 90 bp | TGCCACCTGCTGACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCAGCCTTGTGGAGGGGTaGTGGCTGGTTCCGGTTTTA | + |
Preference number: 4 (lower is better) Translates to: CHLLTRELQSRLACPDSLSLVEG*WLVPVL Trigger: TAAAACCGGAACCAGCCAGCACCCCTCCACAAGGCT...GAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGTCAGCAGGTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR GCA 90 bp | TGCCACCTGCTGACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCCGCAAGCTGACAGGCTaGTGTCACCACACTCTCGAT | + |
Preference number: 4 (lower is better) Translates to: CHLLTRELQSRLACPDSLRKLTG*CHHTLD Trigger: ATCGAGAGTGTGGTGACAGCAGCCTGTCAGCTTGCG...GAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGTCAGCAGGTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR CCA 90 bp | TGCCACCTGCTGACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCCTTGTGGAGGGGTGCTaGCTGGTTCCGGTTTTATGG | + |
Preference number: 4 (lower is better) Translates to: CHLLTRELQSRLACPDSLLVEGC*LVPVLW Trigger: CCATAAAACCGGAACCAGCCAGCACCCCTCCACAAG...GAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGTCAGCAGGTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR TCA 90 bp | GGCTTGCTTGTCCTGACTCCCTCTGGGATTTCAAAGGTACCCTGTCTTTCGATTCAGAGACTGCCCCAGTaGAGCGTTCGTCTCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: GLLVLTPSGISKVPCLSIQRLPQ*SVRLSS Trigger: GCTGCTGAGACGAACGCTTCACTGGGGCAGTCTCTG...AATCGAAAGACAGGGTACCTTTGAAATCCCAGAGGGAGTCAGGACAAGCAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR CCA 90 bp | TGCCACCTGCTGACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCGCTGAGGGGCCAAACTaGTTCATAATCTGCCGAGCT | + |
Preference number: 4 (lower is better) Translates to: CHLLTRELQSRLACPDSLAEGPN*FIICRA Trigger: AGCTCGGCAGATTATGAACCAGTTTGGCCCCTCAGC...GAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGTCAGCAGGTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR CCA 90 bp | TGCCACCTGCTGACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCCCACTGCAGTACTATTaGCCATGGAGCCTTGTGGAG | + |
Preference number: 4 (lower is better) Translates to: CHLLTRELQSRLACPDSLPLQYY*PWSLVE Trigger: CTCCACAAGGCTCCATGGCCAATAGTACTGCAGTGG...GAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGTCAGCAGGTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR GCA 90 bp | AGAGAAGGTCACCCTACTCAATTCTTATGGCCGAGAAGCTGGACTCAAACTCCTGCTAAGACGACCTCCTaGCCCAGGAGTGCCTGGTAT | + |
Preference number: 4 (lower is better) Translates to: REGHPTQFLWPRSWTQTPAKTTS*PRSAWY Trigger: ATACCAGGCACTCCTGGGGCAGGAGGTCGTCTTAGC...AGGAGTTTGAGTCCAGCTTCTCGGCCATAAGAATTGAGTAGGGTGACCTTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR CCA 90 bp | TGCCACCTGCTGACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCTTCAGAGCCAAATCCTaGGATCCACATGTTCCACTG | + |
Preference number: 4 (lower is better) Translates to: CHLLTRELQSRLACPDSLFRAKS*DPHVPL Trigger: CAGTGGAACATGTGGATCCCAGGATTTGGCTCTGAA...GAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGTCAGCAGGTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR TCA 90 bp | TGCCACCTGCTGACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCTTGCTGTCCATTCCCTaGCCTTTCCGTGTGTTATTT | + |
Preference number: 4 (lower is better) Translates to: CHLLTRELQSRLACPDSLLLSIP*PFRVLF Trigger: AAATAACACACGGAAAGGTCAGGGAATGGACAGCAA...GAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGTCAGCAGGTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR GCA 90 bp | TGCCACCTGCTGACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCCTCTGGAAGATACATTaGTCCTCTTTGAGATGGCAG | + |
Preference number: 4 (lower is better) Translates to: CHLLTRELQSRLACPDSLLWKIH*SSLRWQ Trigger: CTGCCATCTCAAAGAGGAGCAATGTATCTTCCAGAG...GAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGTCAGCAGGTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR GCA 90 bp | GGCTTGCTTGTCCTGACTCCCTCTGGGATTTCAAAGGTACCCTGTCTTTCGATTCACTGGCGCTCTAAATaGAGCTGGACATCTTTCACC | + |
Preference number: 4 (lower is better) Translates to: GLLVLTPSGISKVPCLSIHWRSK*SWTSFT Trigger: GGTGAAAGATGTCCAGCTGCATTTAGAGCGCCAGTG...AATCGAAAGACAGGGTACCTTTGAAATCCCAGAGGGAGTCAGGACAAGCAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR GCA 90 bp | TGCCACCTGCTGACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCTGTTTTCCGGATCAATaGCATTCTCTGTTTGTGAGC | + |
Preference number: 4 (lower is better) Translates to: CHLLTRELQSRLACPDSLCFPDQ*HSLFVS Trigger: GCTCACAAACAGAGAATGGCATTGATCCGGAAAACA...GAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGTCAGCAGGTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR GCA 90 bp | GGCTTGCTTGTCCTGACTCCCTCTGGGATTTCAAAGGTACCCTGTCTTTCGATTATGATATGCAGAGACTaGCCCAGTGAAGCGTTCGTC | + |
Preference number: 4 (lower is better) Translates to: GLLVLTPSGISKVPCLSIMICRD*PSEAFV Trigger: GACGAACGCTTCACTGGGGCAGTCTCTGCATATCAT...AATCGAAAGACAGGGTACCTTTGAAATCCCAGAGGGAGTCAGGACAAGCAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR CCA 90 bp | ACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCTGGGATTTCAAATGCCCCAGGAGTGCCTaGTATCTTTACCACTGCAGT | + |
Preference number: 4 (lower is better) Translates to: TRELQSRLACPDSLWDFKCPRSA*YLYHCS Trigger: ACTGCAGTGGTAAAGATACCAGGCACTCCTGGGGCA...TTTGAAATCCCAGAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR TCA 90 bp | ACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCTGGGATTTCAAAAGAAATTGGAGAGGTTaGTTAGGGCTGAGGGGCCAA | + |
Preference number: 4 (lower is better) Translates to: TRELQSRLACPDSLWDFKRNWRG*LGLRGQ Trigger: TTGGCCCCTCAGCCCTAATCAACCTCTCCAATTTCT...TTTGAAATCCCAGAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR CCA 90 bp | ACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCTGGGATTTCAAAATCCACATGTTCCACTaGCGCTCTAAATGCAGCTGG | + |
Preference number: 4 (lower is better) Translates to: TRELQSRLACPDSLWDFKIHMFH*RSKCSW Trigger: CCAGCTGCATTTAGAGCGCCAGTGGAACATGTGGAT...TTTGAAATCCCAGAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR CCA 90 bp | TGCCACCTGCTGACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCTGTTATGGCCTCCCTTaGGGTAAAATGATGGAAAAT | + |
Preference number: 4 (lower is better) Translates to: CHLLTRELQSRLACPDSLCYGLP*GKMMEN Trigger: ATTTTCCATCATTTTACCCCAAGGGAGGCCATAACA...GAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGTCAGCAGGTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR GCA 90 bp | AGAGAAGGTCACCCTACTCAATTCTTATGGCCGAGAAGCTGGACTCAAACTCCTTATCTCCCCATGATATaGAGAGACTGCCCCAGTGAA | + |
Preference number: 4 (lower is better) Translates to: REGHPTQFLWPRSWTQTPYLPMI*RDCPSE Trigger: TTCACTGGGGCAGTCTCTGCATATCATGGGGAGATA...AGGAGTTTGAGTCCAGCTTCTCGGCCATAAGAATTGAGTAGGGTGACCTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR CCA 90 bp | ACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCTGGGATTTCAAAGATCCTGTTTCTTTTTaGAGCTGTGAGGACCAAGGC | + |
Preference number: 4 (lower is better) Translates to: TRELQSRLACPDSLWDFKDPVSF*SCEDQG Trigger: GCCTTGGTCCTCACAGCTCCAAAAAGAAACAGGATC...TTTGAAATCCCAGAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR CCA 90 bp | ACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCTGGGATTTCAAATTATGGCCGAGAAGCTaGACTCAAACTCCTGCTGAT | + |
Preference number: 4 (lower is better) Translates to: TRELQSRLACPDSLWDFKLWPRS*TQTPAD Trigger: ATCAGCAGGAGTTTGAGTCCAGCTTCTCGGCCATAA...TTTGAAATCCCAGAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR TCA 90 bp | CTGGGATTTCAAAGGTACCCTGTCTTTCGATTAATAACTTCTTTATTCTGGAAACGATGCCGCGCAAGCTaGCAGGCTGCTGTCACCACA | + |
Preference number: 4 (lower is better) Translates to: LGFQRYPVFRLITSLFWKRCRAS*QAAVTT Trigger: TGTGGTGACAGCAGCCTGTCAGCTTGCGCGGCATCG...TTTCCAGAATAAAGAAGTTATTAATCGAAAGACAGGGTACCTTTGAAATCCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR TCA 90 bp | GGCTTGCTTGTCCTGACTCCCTCTGGGATTTCAAAGGTACCCTGTCTTTCGATTTCTCAAACACCAAAATaGATAACGATGCTGCCACCT | + |
Preference number: 4 (lower is better) Translates to: GLLVLTPSGISKVPCLSISQTPK*ITMLPP Trigger: AGGTGGCAGCATCGTTATTCATTTTGGTGTTTGAGA...AATCGAAAGACAGGGTACCTTTGAAATCCCAGAGGGAGTCAGGACAAGCAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR GCA 90 bp | AGAGAAGGTCACCCTACTCAATTCTTATGGCCGAGAAGCTGGACTCAAACTCCTAACTGGTTCATAATCTaGCGAGCTTTGGACTTCAGC | + |
Preference number: 4 (lower is better) Translates to: REGHPTQFLWPRSWTQTPNWFII*RALDFS Trigger: GCTGAAGTCCAAAGCTCGGCAGATTATGAACCAGTT...AGGAGTTTGAGTCCAGCTTCTCGGCCATAAGAATTGAGTAGGGTGACCTTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR GCA 90 bp | AGAGAAGGTCACCCTACTCAATTCTTATGGCCGAGAAGCTGGACTCAAACTCCTAAATCATCAGCAATCTaGAGCAGCATCTCCTCCACA | + |
Preference number: 4 (lower is better) Translates to: REGHPTQFLWPRSWTQTPKSSAI*SSISST Trigger: TGTGGAGGAGATGCTGCTGCAGATTGCTGATGATTT...AGGAGTTTGAGTCCAGCTTCTCGGCCATAAGAATTGAGTAGGGTGACCTTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR GCA 90 bp | ACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCTGGGATTTCAAATGGTATCTTTACCACTaGAGTACTATTGGCCATGGA | + |
Preference number: 4 (lower is better) Translates to: TRELQSRLACPDSLWDFKWYLYH*STIGHG Trigger: TCCATGGCCAATAGTACTGCAGTGGTAAAGATACCA...TTTGAAATCCCAGAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR CCA 90 bp | ACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCTGGGATTTCAAACTGGTTCCGGTTTTATaGATGAGAAATTGGAGAGGT | + |
Preference number: 4 (lower is better) Translates to: TRELQSRLACPDSLWDFKLVPVL*MRNWRG Trigger: ACCTCTCCAATTTCTCATCCATAAAACCGGAACCAG...TTTGAAATCCCAGAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR CCA 90 bp | ACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCTGGGATTTCAAACCGTGTGTTATTTCTTaGTTGTTTTCCGGATCAATG | + |
Preference number: 4 (lower is better) Translates to: TRELQSRLACPDSLWDFKPCVIS*LFSGSM Trigger: CATTGATCCGGAAAACAACCAAGAAATAACACACGG...TTTGAAATCCCAGAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR TCA 90 bp | CTGGGATTTCAAAGGTACCCTGTCTTTCGATTAATAACTTCTTTATTCTGGAAAGCGTCTATCTCCCCATaGTATGCAGAGACTGCCCCA | + |
Preference number: 4 (lower is better) Translates to: LGFQRYPVFRLITSLFWKASISP*YAETAP Trigger: TGGGGCAGTCTCTGCATATCATGGGGAGATAGACGC...TTTCCAGAATAAAGAAGTTATTAATCGAAAGACAGGGTACCTTTGAAATCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR TCA 90 bp | AGAGAAGGTCACCCTACTCAATTCTTATGGCCGAGAAGCTGGACTCAAACTCCTATGATGGAAAATCCCTaGGTTTTTCTCAAACACCAA | + |
Preference number: 4 (lower is better) Translates to: REGHPTQFLWPRSWTQTPMMENP*VFLKHQ Trigger: TTGGTGTTTGAGAAAAACTCAGGGATTTTCCATCAT...AGGAGTTTGAGTCCAGCTTCTCGGCCATAAGAATTGAGTAGGGTGACCTTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR GCA 90 bp | CTGGGATTTCAAAGGTACCCTGTCTTTCGATTAATAACTTCTTTATTCTGGAAACTCCTGCCCCAGGAGTaGCTGGTATCTTTACCACTG | + |
Preference number: 4 (lower is better) Translates to: LGFQRYPVFRLITSLFWKLLPQE*LVSLPL Trigger: CAGTGGTAAAGATACCAGGCACTCCTGGGGCAGGAG...TTTCCAGAATAAAGAAGTTATTAATCGAAAGACAGGGTACCTTTGAAATCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR CCA 90 bp | CTGGGATTTCAAAGGTACCCTGTCTTTCGATTAATAACTTCTTTATTCTGGAAACAGTACTATTGGCCATaGAGCCTTGTGGAGGGGTGC | + |
Preference number: 4 (lower is better) Translates to: LGFQRYPVFRLITSLFWKQYYWP*SLVEGC Trigger: GCACCCCTCCACAAGGCTCCATGGCCAATAGTACTG...TTTCCAGAATAAAGAAGTTATTAATCGAAAGACAGGGTACCTTTGAAATCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR CCA 90 bp | CTGGGATTTCAAAGGTACCCTGTCTTTCGATTAATAACTTCTTTATTCTGGAAATGCTCCTCTTTGAGATaGCAGGGAAAAGGGACCGGA | + |
Preference number: 4 (lower is better) Translates to: LGFQRYPVFRLITSLFWKCSSLR*QGKGTG Trigger: TCCGGTCCCTTTTCCCTGCCATCTCAAAGAGGAGCA...TTTCCAGAATAAAGAAGTTATTAATCGAAAGACAGGGTACCTTTGAAATCCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR TCA 90 bp | CTGGGATTTCAAAGGTACCCTGTCTTTCGATTAATAACTTCTTTATTCTGGAAAGCCATTCTCTGTTTGTaGGCTTCTGTGGTGCAAGCT | + |
Preference number: 4 (lower is better) Translates to: LGFQRYPVFRLITSLFWKAILCL*ASVVQA Trigger: AGCTTGCACCACAGAAGCTCACAAACAGAGAATGGC...TTTCCAGAATAAAGAAGTTATTAATCGAAAGACAGGGTACCTTTGAAATCCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR CCA 90 bp | CTGGGATTTCAAAGGTACCCTGTCTTTCGATTAATAACTTCTTTATTCTGGAAACGCTCTAAATGCAGCTaGACATCTTTCACCTCCAGG | + |
Preference number: 4 (lower is better) Translates to: LGFQRYPVFRLITSLFWKRSKCS*TSFTSR Trigger: CCTGGAGGTGAAAGATGTCCAGCTGCATTTAGAGCG...TTTCCAGAATAAAGAAGTTATTAATCGAAAGACAGGGTACCTTTGAAATCCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR TCA 90 bp | CTGGGATTTCAAAGGTACCCTGTCTTTCGATTAATAACTTCTTTATTCTGGAAATTCTTTTTGGAGCTGTaGGGACCAAGGCCAATTAAA | + |
Preference number: 4 (lower is better) Translates to: LGFQRYPVFRLITSLFWKFFLEL*GPRPIK Trigger: TTTAATTGGCCTTGGTCCTCACAGCTCCAAAAAGAA...TTTCCAGAATAAAGAAGTTATTAATCGAAAGACAGGGTACCTTTGAAATCCCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR TCA 90 bp | CTGGGATTTCAAAGGTACCCTGTCTTTCGATTAATAACTTCTTTATTCTGGAAATTCTTGGTCAATACCTaGTTGTTTTCAGGGCTAAGA | + |
Preference number: 4 (lower is better) Translates to: LGFQRYPVFRLITSLFWKFLVNT*LFSGLR Trigger: TCTTAGCCCTGAAAACAATCAGGTATTGACCAAGAA...TTTCCAGAATAAAGAAGTTATTAATCGAAAGACAGGGTACCTTTGAAATCCCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR GCA 90 bp | CTGGGATTTCAAAGGTACCCTGTCTTTCGATTAATAACTTCTTTATTCTGGAAAACATCTTCATCCAACTaGTCATTAGGATCCACTTCT | + |
Preference number: 4 (lower is better) Translates to: LGFQRYPVFRLITSLFWKTSSSN*SLGSTS Trigger: AGAAGTGGATCCTAATGAGCAGTTGGATGAAGATGT...TTTCCAGAATAAAGAAGTTATTAATCGAAAGACAGGGTACCTTTGAAATCCCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS TCA 90 bp | AGGCAGCAGCGTCTATCTCCCCATGATATGCAGAGACTGCCCCAGTaGAGCGTTCGTCTCAGCAGCCGGTCCGACTGCGCGGCCCTCCCC | + |
Preference number: 5 (lower is better) Translates to: RQQRLSPHDMQRLPQ*SVRLSSRSDCAALP Trigger: GGGGAGGGCCGCGCAGTCGGACCGGCTGCTGAGACGAACGCTTCACTGGGGCAGTCTCTGCATATCATGGGGAGATAGACGCTGCTGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495422.2 |
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CDS GCA 90 bp | CCGCGCGTGGACCAGTCAGCTTCCGGGTGTGACTGGAACAGGGCTTaGCATCTTCTTCAGAGTCACTTTGCAGGGGTTGGCGAAGCTGCT | + |
Preference number: 5 (lower is better) Translates to: PRVDQSASGCDWNRA*HLLQSHFAGVGEAA Trigger: AGCAGCTTCGCCAACCCCTGCAAAGTGACTCTGAAGAAGATGGCAAGCCCTGTTCCAGTCACACCCGGAAGCTGACTGGTCCACGCGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS GCA 90 bp | AAAGCTACAGGCAGCAGCGTCTATCTCCCCATGATATGCAGAGACTaGCCCAGTGAAGCGTTCGTCTCAGCAGCCGGTCCGACTGCGCGG | + |
Preference number: 5 (lower is better) Translates to: KATGSSVYLPMICRD*PSEAFVSAAGPTAR Trigger: CCGCGCAGTCGGACCGGCTGCTGAGACGAACGCTTCACTGGGGCAGTCTCTGCATATCATGGGGAGATAGACGCTGCTGCCTGTAGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000495422.2 |
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CDS GCA 90 bp | GCTAAGACGACCTCCTGCCCCAGGAGTGCCTGGTATCTTTACCACTaGAGTACTATTGGCCATGGAGCCTTGTGGAGGGGTGCTGGCTGG | + |
Preference number: 5 (lower is better) Translates to: AKTTSCPRSAWYLYH*STIGHGALWRGAGW Trigger: CCAGCCAGCACCCCTCCACAAGGCTCCATGGCCAATAGTACTGCAGTGGTAAAGATACCAGGCACTCCTGGGGCAGGAGGTCGTCTTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000263974.4 ENST00000373824.9 ENST00000495422.2 |
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CDS TCA 90 bp | GGGGTTGGCGAAGCTGCTTCCATCCACGTACAGCTCCCAGTCTACTaGTGTTTAAGGGTGGTCTCGGAGGTTGGGCCCCAGGTTACACAG | + |
Preference number: 5 (lower is better) Translates to: GVGEAASIHVQLPVY*CLRVVSEVGPQVTQ Trigger: CTGTGTAACCTGGGGCCCAACCTCCGAGACCACCCTTAAACATCAGTAGACTGGGAGCTGTACGTGGATGGAAGCAGCTTCGCCAACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS GCA 90 bp | GGACCAAGGCCAATTAAAGGCAGCAGCGTCTATCTCCCCATGATATaGAGAGACTGCCCCAGTGAAGCGTTCGTCTCAGCAGCCGGTCCG | + |
Preference number: 5 (lower is better) Translates to: GPRPIKGSSVYLPMI*RDCPSEAFVSAAGP Trigger: CGGACCGGCTGCTGAGACGAACGCTTCACTGGGGCAGTCTCTGCATATCATGGGGAGATAGACGCTGCTGCCTTTAATTGGCCTTGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS TCA 90 bp | TTTCCTCATGCTTTGGCCGCGCGTGGACCAGTCAGCTTCCGGGTGTaGCTGGAACAGGGCTTGCCATCTTCTTCAGAGTCACTTTGCAGG | + |
Preference number: 5 (lower is better) Translates to: FPHALAARGPVSFRV*LEQGLPSSSESLCR Trigger: CCTGCAAAGTGACTCTGAAGAAGATGGCAAGCCCTGTTCCAGTCACACCCGGAAGCTGACTGGTCCACGCGCGGCCAAAGCATGAGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS TCA 90 bp | TGTGAGGACCAAGGCCAATTAAAGGCAGCAGCGTCTATCTCCCCATaGTATGCAGAGACTGCCCCAGTGAAGCGTTCGTCTCAGCAGCCG | + |
Preference number: 5 (lower is better) Translates to: CEDQGQLKAAASISP*YAETAPVKRSSQQP Trigger: CGGCTGCTGAGACGAACGCTTCACTGGGGCAGTCTCTGCATATCATGGGGAGATAGACGCTGCTGCCTTTAATTGGCCTTGGTCCTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS GCA 90 bp | CACCTCCAGGGTGCTAGACTTGCGATGCCGCGCAAGCTGACAGGCTaGTGTCACCACACTCTCGATAAAATCATCAGCAATCTGCAGCAG | + |
Preference number: 5 (lower is better) Translates to: HLQGARLAMPRKLTG*CHHTLDKIISNLQQ Trigger: CTGCTGCAGATTGCTGATGATTTTATCGAGAGTGTGGTGACAGCAGCCTGTCAGCTTGCGCGGCATCGCAAGTCTAGCACCCTGGAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263974.4 ENST00000373824.9 ENST00000471683.5 ENST00000495422.2 |
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CDS CCA 90 bp | CGTACAGCTCCCAGTCTACTGATGTTTAAGGGTGGTCTCGGAGGTTaGGCCCCAGGTTACACAGTGAATCTGTGGCAGAAGTCATGGCAG | + |
Preference number: 5 (lower is better) Translates to: RTAPSLLMFKGGLGG*APGYTVNLWQKSWQ Trigger: CTGCCATGACTTCTGCCACAGATTCACTGTGTAACCTGGGGCCCAACCTCCGAGACCACCCTTAAACATCAGTAGACTGGGAGCTGTACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS-3UTR CAA 90 bp | AGAGAAGGTCACCCTACTCAATTCTTATGGCCGAGAAGCTGGACTCAAACTCCTATTGGCCATGGAGCCTaGTGGAGGGGTGCTGGCTGG | + |
Preference number: 5 (lower is better) Translates to: REGHPTQFLWPRSWTQTPIGHGA*WRGAGW Trigger: CCAGCCAGCACCCCTCCACAAGGCTCCATGGCCAAT...AGGAGTTTGAGTCCAGCTTCTCGGCCATAAGAATTGAGTAGGGTGACCTTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR CAA 90 bp | TGCCACCTGCTGACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCAGCTACAATCCAGGCTaGCTTGTCCTGACTCCCTCT | + |
Preference number: 5 (lower is better) Translates to: CHLLTRELQSRLACPDSLSYNPG*LVLTPS Trigger: AGAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCT...GAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGTCAGCAGGTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS CCA 90 bp | CTGATTGTTTTCAGGGCTAAGACGACCTCCTGCCCCAGGAGTGCCTaGTATCTTTACCACTGCAGTACTATTGGCCATGGAGCCTTGTGG | + |
Preference number: 5 (lower is better) Translates to: LIVFRAKTTSCPRSA*YLYHCSTIGHGALW Trigger: CCACAAGGCTCCATGGCCAATAGTACTGCAGTGGTAAAGATACCAGGCACTCCTGGGGCAGGAGGTCGTCTTAGCCCTGAAAACAATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000263974.4 ENST00000373824.9 ENST00000495422.2 |
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CDS TCA 90 bp | ACATCTTTCACCTCCAGGGTGCTAGACTTGCGATGCCGCGCAAGCTaGCAGGCTGCTGTCACCACACTCTCGATAAAATCATCAGCAATC | + |
Preference number: 5 (lower is better) Translates to: TSFTSRVLDLRCRAS*QAAVTTLSIKSSAI Trigger: GATTGCTGATGATTTTATCGAGAGTGTGGTGACAGCAGCCTGTCAGCTTGCGCGGCATCGCAAGTCTAGCACCCTGGAGGTGAAAGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263974.4 ENST00000373824.9 ENST00000471683.5 ENST00000495422.2 |
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CDS GCA 90 bp | TGTGGCAGAAGTCATGGCAGAAGTCAGCTGACATCTGGATTTAACTaGAGTCAGAGGCAGACACATGATCCCAGCCCACAGCAGGAGCAT | + |
Preference number: 5 (lower is better) Translates to: CGRSHGRSQLTSGFN*SQRQTHDPSPQQEH Trigger: ATGCTCCTGCTGTGGGCTGGGATCATGTGTCTGCCTCTGACTGCAGTTAAATCCAGATGTCAGCTGACTTCTGCCATGACTTCTGCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS-3UTR CAA 90 bp | ACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCTGGGATTTCAAAAGGATGCCTCTTCAGTaGAGGGCCGTGAGAGAAGGT | + |
Preference number: 5 (lower is better) Translates to: TRELQSRLACPDSLWDFKRMPLQ*RAVREG Trigger: ACCTTCTCTCACGGCCCTCAACTGAAGAGGCATCCT...TTTGAAATCCCAGAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS GCA 90 bp | CTTCTTGGTCAATACCTGATTGTTTTCAGGGCTAAGACGACCTCCTaGCCCAGGAGTGCCTGGTATCTTTACCACTGCAGTACTATTGGC | + |
Preference number: 5 (lower is better) Translates to: LLGQYLIVFRAKTTS*PRSAWYLYHCSTIG Trigger: GCCAATAGTACTGCAGTGGTAAAGATACCAGGCACTCCTGGGGCAGGAGGTCGTCTTAGCCCTGAAAACAATCAGGTATTGACCAAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000263974.4 ENST00000373824.9 ENST00000495422.2 |
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CDS TCA 90 bp | AGGTTACACAGTGAATCTGTGGCAGAAGTCATGGCAGAAGTCAGCTaGCATCTGGATTTAACTGCAGTCAGAGGCAGACACATGATCCCA | + |
Preference number: 5 (lower is better) Translates to: RLHSESVAEVMAEVS*HLDLTAVRGRHMIP Trigger: TGGGATCATGTGTCTGCCTCTGACTGCAGTTAAATCCAGATGTCAGCTGACTTCTGCCATGACTTCTGCCACAGATTCACTGTGTAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS CCA 90 bp | CTTTGGACTTCAGCTCATAGAGCTTATCGAGATCCTGTTTCTTTTTaGAGCTGTGAGGACCAAGGCCAATTAACTCTCCGGAGCCTGTGT | + |
Preference number: 5 (lower is better) Translates to: LWTSAHRAYRDPVSF*SCEDQGQLTLRSLC Trigger: ACACAGGCTCCGGAGAGTTAATTGGCCTTGGTCCTCACAGCTCCAAAAAGAAACAGGATCTCGATAAGCTCTATGAGCTGAAGTCCAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000263974.4 |
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CDS-3UTR CAA 90 bp | GGCTTGCTTGTCCTGACTCCCTCTGGGATTTCAAAGGTACCCTGTCTTTCGATTTCTCTGGAAGATACATaGCTCCTCTTTGAGATGGCA | + |
Preference number: 5 (lower is better) Translates to: GLLVLTPSGISKVPCLSISLEDT*LLFEMA Trigger: TGCCATCTCAAAGAGGAGCAATGTATCTTCCAGAGA...AATCGAAAGACAGGGTACCTTTGAAATCCCAGAGGGAGTCAGGACAAGCAAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS CCA 90 bp | CTTTGGACTTCAGCTCATAGAGCTTATCGAGATCCTGTTTCTTTTTaGAGCTGTGAGGACCAAGGCCAATTAAAGGCAGCAGCGTCTATC | + |
Preference number: 5 (lower is better) Translates to: LWTSAHRAYRDPVSF*SCEDQGQLKAAASI Trigger: GATAGACGCTGCTGCCTTTAATTGGCCTTGGTCCTCACAGCTCCAAAAAGAAACAGGATCTCGATAAGCTCTATGAGCTGAAGTCCAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS CCA 90 bp | GGGAGGTTCAGAGGGGTCATAGCACACATCGGACTGGTCACTTCCTaGATTACATACTTTGTACTGAATGTTATTGTACGAACAGGTTCC | + |
Preference number: 5 (lower is better) Translates to: GRFRGVIAHIGLVTS*ITYFVLNVIVRTGS Trigger: GGAACCTGTTCGTACAATAACATTCAGTACAAAGTATGTAATCCAGGAAGTGACCAGTCCGATGTGTGCTATGACCCCTCTGAACCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS TCA 90 bp | TCTAGATCTTTAATTACATCAGCAACAGCTGTGAGCCCGGTGAAATaGGAGGCAGCCATTTTCAAAAGCTACAGGCAGCAGCGTCTATCT | + |
Preference number: 5 (lower is better) Translates to: SRSLITSATAVSPVK*EAAIFKSYRQQRLS Trigger: AGATAGACGCTGCTGCCTGTAGCTTTTGAAAATGGCTGCCTCTCATTTCACCGGGCTCACAGCTGTTGCTGATGTAATTAAAGATCTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495422.2 |
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CDS-3UTR CAA 90 bp | ACTAGAGAGCTACAATCCAGGCTTGCTTGTCCTGACTCCCTCTGGGATTTCAAATTTATGGATGAGAAATaGGAGAGGTTGATTAGGGCT | + |
Preference number: 5 (lower is better) Translates to: TRELQSRLACPDSLWDFKFMDEK*ERLIRA Trigger: AGCCCTAATCAACCTCTCCAATTTCTCATCCATAAA...TTTGAAATCCCAGAGGGAGTCAGGACAAGCAAGCCTGGATTGTAGCTCTCTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS-3UTR CAA 90 bp | AGAGAAGGTCACCCTACTCAATTCTTATGGCCGAGAAGCTGGACTCAAACTCCTTCCGTGTGTTATTTCTaGGTTGTTTTCCGGATCAAT | + |
Preference number: 5 (lower is better) Translates to: REGHPTQFLWPRSWTQTPSVCYF*VVFRIN Trigger: ATTGATCCGGAAAACAACCAAGAAATAACACACGGA...AGGAGTTTGAGTCCAGCTTCTCGGCCATAAGAATTGAGTAGGGTGACCTTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS CCA 90 bp | CTTTGGACTTCAGCTCATAGAGCTTATCGAGATCCTGTTTCTTTTTaGAGCTGTGAGGACCAAGGCCAATTAAAGCTATCTGAGTGTCTA | + |
Preference number: 5 (lower is better) Translates to: LWTSAHRAYRDPVSF*SCEDQGQLKLSECL Trigger: TAGACACTCAGATAGCTTTAATTGGCCTTGGTCCTCACAGCTCCAAAAAGAAACAGGATCTCGATAAGCTCTATGAGCTGAAGTCCAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000495422.2 |
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CDS TCA 90 bp | CTGATGTATATACTGGGAACAGCCCTCAGTCTGAAGAAGGTCAGTTaGAGTCCTTACTGTACAAGTCCAGATTTTAAGGAAAATGAGTCC | + |
Preference number: 5 (lower is better) Translates to: LMYILGTALSLKKVS*SPYCTSPDFKENES Trigger: GGACTCATTTTCCTTAAAATCTGGACTTGTACAGTAAGGACTTCAACTGACCTTCTTCAGACTGAGGGCTGTTCCCAGTATATACATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS CCA 90 bp | AAATACATTGCTGTCCATTCCCTGACCTTTCCGTGTGTTATTTCTTaGTTGTTTTCCGGATCAATGCCATTCTCTGTTTGTGAGCTTCTG | + |
Preference number: 5 (lower is better) Translates to: KYIAVHSLTFPCVIS*LFSGSMPFSVCELL Trigger: CAGAAGCTCACAAACAGAGAATGGCATTGATCCGGAAAACAACCAAGAAATAACACACGGAAAGGTCAGGGAATGGACAGCAATGTATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000263974.4 ENST00000373824.9 ENST00000495422.2 |
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CDS-3UTR CAA 90 bp | CTGGGATTTCAAAGGTACCCTGTCTTTCGATTAATAACTTCTTTATTCTGGAAATGTGTTATTTCTTGGTaGTTTTCCGGATCAATGCCA | + |
Preference number: 5 (lower is better) Translates to: LGFQRYPVFRLITSLFWKCVISW*FSGSMP Trigger: TGGCATTGATCCGGAAAACAACCAAGAAATAACACA...TTTCCAGAATAAAGAAGTTATTAATCGAAAGACAGGGTACCTTTGAAATCCCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS TCA 72 bp | CGTCTATCTCCCCATGATATGCAGAGACTGCCCCAGTaGAGCGTTCGTCTCAGCAGCCGGTCCGACTGCGCG | + |
Preference number: 6 (lower is better) Translates to: RLSPHDMQRLPQ*SVRLSSRSDCA Trigger: CGCGCAGTCGGACCGGCTGCTGAGACGAACGCTTCACTGGGGCAGTCTCTGCATATCATGGGGAGATAGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495422.2 |
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CDS TCA 72 bp | GCTTTGGCCGCGCGTGGACCAGTCAGCTTCCGGGTGTaGCTGGAACAGGGCTTGCCATCTTCTTCAGAGTCA | + |
Preference number: 6 (lower is better) Translates to: ALAARGPVSFRV*LEQGLPSSSES Trigger: TGACTCTGAAGAAGATGGCAAGCCCTGTTCCAGTCACACCCGGAAGCTGACTGGTCCACGCGCGGCCAAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS CAA 90 bp | CCTCCTGCCCCAGGAGTGCCTGGTATCTTTACCACTGCAGTACTATaGGCCATGGAGCCTTGTGGAGGGGTGCTGGCTGGTTCCGGTTTT | + |
Preference number: 6 (lower is better) Translates to: PPAPGVPGIFTTAVL*AMEPCGGVLAGSGF Trigger: AAAACCGGAACCAGCCAGCACCCCTCCACAAGGCTCCATGGCCAATAGTACTGCAGTGGTAAAGATACCAGGCACTCCTGGGGCAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000263974.4 ENST00000373824.9 ENST00000495422.2 |
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CDS CCA 72 bp | TGGCCGCGCGTGGACCAGTCAGCTTCCGGGTGTGACTaGAACAGGGCTTGCCATCTTCTTCAGAGTCACTTT | + |
Preference number: 6 (lower is better) Translates to: WPRVDQSASGCD*NRACHLLQSHF Trigger: AAAGTGACTCTGAAGAAGATGGCAAGCCCTGTTCCAGTCACACCCGGAAGCTGACTGGTCCACGCGCGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS TCA 72 bp | AGGGTGGTCTCGGAGGTTGGGCCCCAGGTTACACAGTaGATCTGTGGCAGAAGTCATGGCAGAAGTCAGCTG | + |
Preference number: 6 (lower is better) Translates to: RVVSEVGPQVTQ*ICGRSHGRSQL Trigger: CAGCTGACTTCTGCCATGACTTCTGCCACAGATTCACTGTGTAACCTGGGGCCCAACCTCCGAGACCACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS TCA 72 bp | GAAGCTGCTTCCATCCACGTACAGCTCCCAGTCTACTaGTGTTTAAGGGTGGTCTCGGAGGTTGGGCCCCAG | + |
Preference number: 6 (lower is better) Translates to: EAASIHVQLPVY*CLRVVSEVGPQ Trigger: CTGGGGCCCAACCTCCGAGACCACCCTTAAACATCAGTAGACTGGGAGCTGTACGTGGATGGAAGCAGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS GCA 72 bp | ACCTCCTGCCCCAGGAGTGCCTGGTATCTTTACCACTaGAGTACTATTGGCCATGGAGCCTTGTGGAGGGGT | + |
Preference number: 6 (lower is better) Translates to: TSCPRSAWYLYH*STIGHGALWRG Trigger: ACCCCTCCACAAGGCTCCATGGCCAATAGTACTGCAGTGGTAAAGATACCAGGCACTCCTGGGGCAGGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000263974.4 ENST00000373824.9 ENST00000495422.2 |
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CDS GCA 72 bp | GACCAGTCAGCTTCCGGGTGTGACTGGAACAGGGCTTaGCATCTTCTTCAGAGTCACTTTGCAGGGGTTGGC | + |
Preference number: 6 (lower is better) Translates to: DQSASGCDWNRA*HLLQSHFAGVG Trigger: GCCAACCCCTGCAAAGTGACTCTGAAGAAGATGGCAAGCCCTGTTCCAGTCACACCCGGAAGCTGACTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS CAA 72 bp | CCAGGAGTGCCTGGTATCTTTACCACTGCAGTACTATaGGCCATGGAGCCTTGTGGAGGGGTGCTGGCTGGT | + |
Preference number: 6 (lower is better) Translates to: PGVPGIFTTAVL*AMEPCGGVLAG Trigger: ACCAGCCAGCACCCCTCCACAAGGCTCCATGGCCAATAGTACTGCAGTGGTAAAGATACCAGGCACTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000263974.4 ENST00000373824.9 ENST00000495422.2 |
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CDS CAA 72 bp | GGGCTTGCCATCTTCTTCAGAGTCACTTTGCAGGGGTaGGCGAAGCTGCTTCCATCCACGTACAGCTCCCAG | + |
Preference number: 6 (lower is better) Translates to: GLAIFFRVTLQG*AKLLPSTYSSQ Trigger: CTGGGAGCTGTACGTGGATGGAAGCAGCTTCGCCAACCCCTGCAAAGTGACTCTGAAGAAGATGGCAAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS TCA 72 bp | ACCTCCAGGGTGCTAGACTTGCGATGCCGCGCAAGCTaGCAGGCTGCTGTCACCACACTCTCGATAAAATCA | + |
Preference number: 6 (lower is better) Translates to: TSRVLDLRCRAS*QAAVTTLSIKS Trigger: TGATTTTATCGAGAGTGTGGTGACAGCAGCCTGTCAGCTTGCGCGGCATCGCAAGTCTAGCACCCTGGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263974.4 ENST00000373824.9 ENST00000471683.5 ENST00000495422.2 |
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CDS CCA 72 bp | TGCCTGGTATCTTTACCACTGCAGTACTATTGGCCATaGAGCCTTGTGGAGGGGTGCTGGCTGGTTCCGGTT | + |
Preference number: 6 (lower is better) Translates to: CLVSLPLQYYWP*SLVEGCWLVPV Trigger: AACCGGAACCAGCCAGCACCCCTCCACAAGGCTCCATGGCCAATAGTACTGCAGTGGTAAAGATACCAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000263974.4 ENST00000373824.9 ENST00000495422.2 |
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CDS CCA 72 bp | CTCGGAGGTTGGGCCCCAGGTTACACAGTGAATCTGTaGCAGAAGTCATGGCAGAAGTCAGCTGACATCTGG | + |
Preference number: 6 (lower is better) Translates to: LGGWAPGYTVNL*QKSWQKSADIW Trigger: CCAGATGTCAGCTGACTTCTGCCATGACTTCTGCCACAGATTCACTGTGTAACCTGGGGCCCAACCTCCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS CCA 72 bp | GGCTTGCCATCTTCTTCAGAGTCACTTTGCAGGGGTTaGCGAAGCTGCTTCCATCCACGTACAGCTCCCAGT | + |
Preference number: 6 (lower is better) Translates to: GLPSSSESLCRG*RSCFHPRTAPS Trigger: ACTGGGAGCTGTACGTGGATGGAAGCAGCTTCGCCAACCCCTGCAAAGTGACTCTGAAGAAGATGGCAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS GCA 72 bp | CTGGAACAGGGCTTGCCATCTTCTTCAGAGTCACTTTaGAGGGGTTGGCGAAGCTGCTTCCATCCACGTACA | + |
Preference number: 6 (lower is better) Translates to: LEQGLPSSSESL*RGWRSCFHPRT Trigger: TGTACGTGGATGGAAGCAGCTTCGCCAACCCCTGCAAAGTGACTCTGAAGAAGATGGCAAGCCCTGTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS CCA 72 bp | TTCAGGGCTAAGACGACCTCCTGCCCCAGGAGTGCCTaGTATCTTTACCACTGCAGTACTATTGGCCATGGA | + |
Preference number: 6 (lower is better) Translates to: FRAKTTSCPRSA*YLYHCSTIGHG Trigger: TCCATGGCCAATAGTACTGCAGTGGTAAAGATACCAGGCACTCCTGGGGCAGGAGGTCGTCTTAGCCCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000263974.4 ENST00000373824.9 ENST00000495422.2 |
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CDS CCA 72 bp | CCCAGTCTACTGATGTTTAAGGGTGGTCTCGGAGGTTaGGCCCCAGGTTACACAGTGAATCTGTGGCAGAAG | + |
Preference number: 6 (lower is better) Translates to: PSLLMFKGGLGG*APGYTVNLWQK Trigger: CTTCTGCCACAGATTCACTGTGTAACCTGGGGCCCAACCTCCGAGACCACCCTTAAACATCAGTAGACTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS TCA 72 bp | CAAGGCCAATTAAAGGCAGCAGCGTCTATCTCCCCATaGTATGCAGAGACTGCCCCAGTGAAGCGTTCGTCT | + |
Preference number: 6 (lower is better) Translates to: QGQLKAAASISP*YAETAPVKRSS Trigger: AGACGAACGCTTCACTGGGGCAGTCTCTGCATATCATGGGGAGATAGACGCTGCTGCCTTTAATTGGCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS GCA 72 bp | GGTGCTAGACTTGCGATGCCGCGCAAGCTGACAGGCTaGTGTCACCACACTCTCGATAAAATCATCAGCAAT | + |
Preference number: 6 (lower is better) Translates to: GARLAMPRKLTG*CHHTLDKIISN Trigger: ATTGCTGATGATTTTATCGAGAGTGTGGTGACAGCAGCCTGTCAGCTTGCGCGGCATCGCAAGTCTAGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263974.4 ENST00000373824.9 ENST00000471683.5 ENST00000495422.2 |
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CDS GCA 72 bp | CCAATTAAAGGCAGCAGCGTCTATCTCCCCATGATATaGAGAGACTGCCCCAGTGAAGCGTTCGTCTCAGCA | + |
Preference number: 6 (lower is better) Translates to: PIKGSSVYLPMI*RDCPSEAFVSA Trigger: TGCTGAGACGAACGCTTCACTGGGGCAGTCTCTGCATATCATGGGGAGATAGACGCTGCTGCCTTTAATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS GCA 72 bp | TCTTCTTCAGAGTCACTTTGCAGGGGTTGGCGAAGCTaGTTCCATCCACGTACAGCTCCCAGTCTACTGATG | + |
Preference number: 6 (lower is better) Translates to: SSSESLCRGWRS*FHPRTAPSLLM Trigger: CATCAGTAGACTGGGAGCTGTACGTGGATGGAAGCAGCTTCGCCAACCCCTGCAAAGTGACTCTGAAGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS GCA 72 bp | CAATACCTGATTGTTTTCAGGGCTAAGACGACCTCCTaGCCCAGGAGTGCCTGGTATCTTTACCACTGCAGT | + |
Preference number: 6 (lower is better) Translates to: QYLIVFRAKTTS*PRSAWYLYHCS Trigger: ACTGCAGTGGTAAAGATACCAGGCACTCCTGGGGCAGGAGGTCGTCTTAGCCCTGAAAACAATCAGGTATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000263974.4 ENST00000373824.9 ENST00000495422.2 |
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CDS GCA 72 bp | AGTCATGGCAGAAGTCAGCTGACATCTGGATTTAACTaGAGTCAGAGGCAGACACATGATCCCAGCCCACAG | + |
Preference number: 6 (lower is better) Translates to: SHGRSQLTSGFN*SQRQTHDPSPQ Trigger: CTGTGGGCTGGGATCATGTGTCTGCCTCTGACTGCAGTTAAATCCAGATGTCAGCTGACTTCTGCCATGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS CCA 72 bp | CAGTACTATTGGCCATGGAGCCTTGTGGAGGGGTGCTaGCTGGTTCCGGTTTTATGGATGAGAAATTGGAGA | + |
Preference number: 6 (lower is better) Translates to: QYYWPWSLVEGC*LVPVLWMRNWR Trigger: TCTCCAATTTCTCATCCATAAAACCGGAACCAGCCAGCACCCCTCCACAAGGCTCCATGGCCAATAGTACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000263974.4 ENST00000373824.9 ENST00000495422.2 |
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CDS CAA 72 bp | TATCTTTACCACTGCAGTACTATTGGCCATGGAGCCTaGTGGAGGGGTGCTGGCTGGTTCCGGTTTTATGGA | + |
Preference number: 6 (lower is better) Translates to: YLYHCSTIGHGA*WRGAGWFRFYG Trigger: TCCATAAAACCGGAACCAGCCAGCACCCCTCCACAAGGCTCCATGGCCAATAGTACTGCAGTGGTAAAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000263974.4 ENST00000373824.9 ENST00000495422.2 |
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CDS TCA 72 bp | AGTGAATCTGTGGCAGAAGTCATGGCAGAAGTCAGCTaGCATCTGGATTTAACTGCAGTCAGAGGCAGACAC | + |
Preference number: 6 (lower is better) Translates to: SESVAEVMAEVS*HLDLTAVRGRH Trigger: GTGTCTGCCTCTGACTGCAGTTAAATCCAGATGTCAGCTGACTTCTGCCATGACTTCTGCCACAGATTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS TCA 72 bp | TTAATTACATCAGCAACAGCTGTGAGCCCGGTGAAATaGGAGGCAGCCATTTTCAAAAGCTACAGGCAGCAG | + |
Preference number: 6 (lower is better) Translates to: LITSATAVSPVK*EAAIFKSYRQQ Trigger: CTGCTGCCTGTAGCTTTTGAAAATGGCTGCCTCTCATTTCACCGGGCTCACAGCTGTTGCTGATGTAATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495422.2 |
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CDS CCA 72 bp | TCAGCTCATAGAGCTTATCGAGATCCTGTTTCTTTTTaGAGCTGTGAGGACCAAGGCCAATTAACTCTCCGG | + |
Preference number: 6 (lower is better) Translates to: SAHRAYRDPVSF*SCEDQGQLTLR Trigger: CCGGAGAGTTAATTGGCCTTGGTCCTCACAGCTCCAAAAAGAAACAGGATCTCGATAAGCTCTATGAGCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000263974.4 |
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CDS CAA 72 bp | GCTGGTTCCGGTTTTATGGATGAGAAATTGGAGAGGTaGATTAGGGCTGAGGGGCCAAACTGGTTCATAATC | + |
Preference number: 6 (lower is better) Translates to: AGSGFMDEKLER*IRAEGPNWFII Trigger: GATTATGAACCAGTTTGGCCCCTCAGCCCTAATCAACCTCTCCAATTTCTCATCCATAAAACCGGAACCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000263974.4 ENST00000373824.9 ENST00000495422.2 |
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CDS CCA 72 bp | TCAGCTCATAGAGCTTATCGAGATCCTGTTTCTTTTTaGAGCTGTGAGGACCAAGGCCAATTAAAGGCAGCA | + |
Preference number: 6 (lower is better) Translates to: SAHRAYRDPVSF*SCEDQGQLKAA Trigger: TGCTGCCTTTAATTGGCCTTGGTCCTCACAGCTCCAAAAAGAAACAGGATCTCGATAAGCTCTATGAGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373824.9 |
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CDS CAA 90 bp | TACATTGCTGTCCATTCCCTGACCTTTCCGTGTGTTATTTCTTGGTaGTTTTCCGGATCAATGCCATTCTCTGTTTGTGAGCTTCTGTGG | + |
Preference number: 6 (lower is better) Translates to: YIAVHSLTFPCVISW*FSGSMPFSVCELLW Trigger: CCACAGAAGCTCACAAACAGAGAATGGCATTGATCCGGAAAACAACCAAGAAATAACACACGGAAAGGTCAGGGAATGGACAGCAATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000263974.4 ENST00000373824.9 ENST00000495422.2 |
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CDS CCA 72 bp | GCTGTCCATTCCCTGACCTTTCCGTGTGTTATTTCTTaGTTGTTTTCCGGATCAATGCCATTCTCTGTTTGT | + |
Preference number: 6 (lower is better) Translates to: AVHSLTFPCVIS*LFSGSMPFSVC Trigger: ACAAACAGAGAATGGCATTGATCCGGAAAACAACCAAGAAATAACACACGGAAAGGTCAGGGAATGGACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000263974.4 ENST00000373824.9 ENST00000495422.2 |
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CDS CAA 72 bp | GTCCATTCCCTGACCTTTCCGTGTGTTATTTCTTGGTaGTTTTCCGGATCAATGCCATTCTCTGTTTGTGAG | + |
Preference number: 6 (lower is better) Translates to: VHSLTFPCVISW*FSGSMPFSVCE Trigger: CTCACAAACAGAGAATGGCATTGATCCGGAAAACAACCAAGAAATAACACACGGAAAGGTCAGGGAATGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000263974.4 ENST00000373824.9 ENST00000495422.2 |
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CDS CAA 72 bp | TGCTGTCCATTCCCTGACCTTTCCGTGTGTTATTTCTaGGTTGTTTTCCGGATCAATGCCATTCTCTGTTTG | + |
Preference number: 6 (lower is better) Translates to: CCPFPDLSVCYF*VVFRINAILCL Trigger: CAAACAGAGAATGGCATTGATCCGGAAAACAACCAAGAAATAACACACGGAAAGGTCAGGGAATGGACAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000263974.4 ENST00000373824.9 ENST00000495422.2 |
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CDS TCA 72 bp | ATACTGGGAACAGCCCTCAGTCTGAAGAAGGTCAGTTaGAGTCCTTACTGTACAAGTCCAGATTTTAAGGAA | + |
Preference number: 6 (lower is better) Translates to: ILGTALSLKKVS*SPYCTSPDFKE Trigger: TTCCTTAAAATCTGGACTTGTACAGTAAGGACTTCAACTGACCTTCTTCAGACTGAGGGCTGTTCCCAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471683.5 |
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CDS CCA 72 bp | TCAGCTCATAGAGCTTATCGAGATCCTGTTTCTTTTTaGAGCTGTGAGGACCAAGGCCAATTAAAGCTATCT | + |
Preference number: 6 (lower is better) Translates to: SAHRAYRDPVSF*SCEDQGQLKLS Trigger: AGATAGCTTTAATTGGCCTTGGTCCTCACAGCTCCAAAAAGAAACAGGATCTCGATAAGCTCTATGAGCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000495422.2 |
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CDS TCA 72 bp | TCGGACTGGTCACTTCCTGGATTACATACTTTGTACTaGATGTTATTGTACGAACAGGTTCCTTTTGGAGTT | + |
Preference number: 6 (lower is better) Translates to: SDWSLPGLHTLY*MLLYEQVPFGV Trigger: AACTCCAAAAGGAACCTGTTCGTACAATAACATTCAGTACAAAGTATGTAATCCAGGAAGTGACCAGTCCGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471683.5 |