Pregenerated sensors for SYCE1 (Homo sapiens)
Ensembl gene IDs: ENSG00000171772Ensembl transcript IDs: ENST00000303903.10, ENST00000343131.7, ENST00000368517.7, ENST00000479535.2
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAGGTATGATTAACTGCATCTTAGAGAACTCGTCTGTCCTGGACTaGCTGAAGAATTTCTGCACTTTGCCATGTTCCATTTTTCCATGG | + |
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Preference number: 1 (lower is better) Translates to: TGMINCILENSSVLD*LKNFCTLPCSIFPW Trigger: CCATGGAAAAATGGAACATGGCAAAGTGCAGAAATTCTTCAGTCAGTCCAGGACAGACGAGTTCTCTAAGATGCAGTTAATCATACCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368517.7 |
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| CDS-3UTR GCA 90 bp | CAGGAGACTGGGGATCTTGGGCCTGACCCCTACTCCTCACCAGTAGACTTAGCTCCTGTCCACGGCTCCTaGGGTGGGCTCGGCCTTCGA | + |
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Preference number: 4 (lower is better) Translates to: QETGDLGPDPYSSPVDLAPVHGS*GGLGLR Trigger: TCGAAGGCCGAGCCCACCGCAGGAGCCGTGGACAGG...AGCTAAGTCTACTGGTGAGGAGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR GCA 90 bp | TCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTCCTCACCAGCAGCTGCACTGTGGCTaGAGCCTCCTGGCTGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: SISHRRLGILGLTPTPHQQLHCG*SLLAAE Trigger: CTCCGCAGCCAGGAGGCTGCAGCCACAGTGCAGCTG...CTGGTGAGGAGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CCA 90 bp | TCAAGCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCCCACGGCTCCTGCGGTaGGCTCGGCCTTCGATGTCA | + |
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Preference number: 4 (lower is better) Translates to: SSQGFNQSQETGDLGPDPPRLLR*ARPSMS Trigger: TGACATCGAAGGCCGAGCCCACCGCAGGAGCCGTGG...GGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGCTTGA 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CCA 90 bp | CAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTCCTGCTGCAGCTGCTGGTaGCGCTGGGCAGCAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QGFNQSQETGDLGPDPYSCCSCW*RWAAAA Trigger: AGCAGCTGCTGCCCAGCGCCACCAGCAGCTGCAGCA...GGAGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR GCA 90 bp | TTGAAAACCTGTGATGTACCTCTGGCCCAGACCAAGAGGCAGAGTCAAGCCAAGGCTCGCCAGCGAGGGTaGCTCGGGAGGGAGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LKTCDVPLAQTKRQSQAKARQRG*LGREPP Trigger: TGGAGGCTCCCTCCCGAGGCACCCTCGCTGGCGAGC...CTTGGCTTGACTCTGCCTCTTGGTCTGGGCCAGAGGTACATCACAGGTTTTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CCA 90 bp | GGCAGAGTCAAGCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCGGGCTAAGGTCGGGGTaGAGTGTGTCCTCCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GRVKPRLQSVTGDWGSWAGLRSG*SVSSWP Trigger: AGGCCAGGAGGACACACTCCACCCCGACCTTAGCCC...GGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGCTTGACTCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR TCA 90 bp | GGCAGAGTCAAGCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGGGGATCTTGGGCCTaGCCCCTACTCCTCACCAGT | + |
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Preference number: 4 (lower is better) Translates to: GRVKPRLQSVTGDWGSWAWGSWA*PLLLTS Trigger: ACTGGTGAGGAGTAGGGGTCAGGCCCAAGATCCCCA...GGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGCTTGACTCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR GCA 90 bp | GCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTTGTTGGCACTTCTGCTaGAGCTGCTGGTGGCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: AKASISHRRLGILGLTPTCWHFC*SCWWRW Trigger: CCAGCGCCACCAGCAGCTGCAGCAGAAGTGCCAACA...AGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CCA 90 bp | AGAGGCAGAGTCAAGCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGTCCCTCATCAAGGGTaGAGGGGCCCTCAGCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: RGRVKPRLQSVTGDWGSWVPHQG*RGPQPH Trigger: GTGGGGCTGAGGGCCCCTCCACCCTTGATGAGGGAC...CCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGCTTGACTCTGCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CCA 90 bp | CAGGAGACTGGGGATCTTGGGCCTGACCCCTACTCCTCACCAGTAGACTTAGCTTTAGGGGCTTGGGACTaGCCACATCTCCTGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: QETGDLGPDPYSSPVDLALGAWD*PHLLGQ Trigger: CTGGCCCAGGAGATGTGGCCAGTCCCAAGCCCCTAA...AGCTAAGTCTACTGGTGAGGAGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR TCA 90 bp | GCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTCCTCACTGTCCTCCTGGCCTATaGGGACATCAGGCCCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: ASISHRRLGILGLTPTPHCPPGL*GHQALL Trigger: AAGCAGGGCCTGATGTCCTCATAGGCCAGGAGGACA...GTGAGGAGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR GCA 90 bp | AGAGGCAGAGTCAAGCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGCACTTCTGCTGCAGCTaGTGGTGGCGCTGGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RGRVKPRLQSVTGDWGSWHFCCS*WWRWAA Trigger: TGCTGCCCAGCGCCACCAGCAGCTGCAGCAGAAGTG...CCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGCTTGACTCTGCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR GCA 90 bp | GAGGCAGAGTCAAGCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGGAGGACATCAGGCCCTaGTTGGTGTGCAGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: EAESSQGFNQSQETGDLGEDIRP*LVCSSR Trigger: CCTGGAGCTGCACACCAAGCAGGGCCTGATGTCCTC...CCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGCTTGACTCTGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CCA 90 bp | CAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTCCTTCCTGAAAGCCCCTTaGGCTAAGGTCGGGGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: QGFNQSQETGDLGPDPYSFLKAP*AKVGVE Trigger: CTCCACCCCGACCTTAGCCCAAGGGGCTTTCAGGAA...GGAGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR TCA 90 bp | CAGAGTCAAGCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGCCAGCTTCTCTTCCTTaGGCAGCTGCTCCTTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QSQAKASISHRRLGILGLPASLP*AAAPCC Trigger: GCAGCAAGGAGCAGCTGCTCAAGGAAGAGAAGCTGG...CAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGCTTGACTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR GCA 90 bp | CAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTCCGGCACAAATCTCCTTTaGCAGCCGCTCTGGCATGTG | + |
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Preference number: 4 (lower is better) Translates to: QGFNQSQETGDLGPDPYSGTNLL*QPLWHV Trigger: CACATGCCAGAGCGGCTGGCAAAGGAGATTTGTGCC...GGAGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR GCA 90 bp | CAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTCCTCTTCCTTGAGCAGCTaGTCCTTGCTGCTGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QGFNQSQETGDLGPDPYSSSLSS*SLLLSR Trigger: CCTGGACAGCAGCAAGGAGCAGCTGCTCAAGGAAGA...GGAGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR GCA 90 bp | CAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTCCAGCCTCTGCCGCTTCTaGTGCTGTTGTTGGCACTTC | + |
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Preference number: 4 (lower is better) Translates to: QGFNQSQETGDLGPDPYSSLCRF*CCCWHF Trigger: GAAGTGCCAACAACAGCAGCAGAAGCGGCAGAGGCT...GGAGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CCA 90 bp | AAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTCCTAGCCGCTCTGGCATGTaGAAGTCCCAGAGGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: KASISHRRLGILGLTPTPSRSGM*KSQRSL Trigger: CAAGGACCTCTGGGACTTCCACATGCCAGAGCGGCT...AGGAGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CCA 90 bp | TTATTGAAAACCTGTGATGTACCTCTGGCCCAGACCAAGAGGCAGAGTCAAGCCAGCTGCTGGTGGCGCTaGGCAGCAGCTGCTAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LLKTCDVPLAQTKRQSQASCWWR*AAAARS Trigger: GCTCCTAGCAGCTGCTGCCCAGCGCCACCAGCAGCT...GGCTTGACTCTGCCTCTTGGTCTGGGCCAGAGGTACATCACAGGTTTTCAATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CCA 90 bp | TTGAAAACCTGTGATGTACCTCTGGCCCAGACCAAGAGGCAGAGTCAAGCCAAGTTCTGCTGCAGCTGCTaGTGGCGCTGGGCAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LKTCDVPLAQTKRQSQAKFCCSC*WRWAAA Trigger: AGCTGCTGCCCAGCGCCACCAGCAGCTGCAGCAGAA...CTTGGCTTGACTCTGCCTCTTGGTCTGGGCCAGAGGTACATCACAGGTTTTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CCA 90 bp | GCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTCCTCACTGTGTGCTCTGGGCTTaGGCAGGGACTTGCATTCCA | + |
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Preference number: 4 (lower is better) Translates to: ASISHRRLGILGLTPTPHCVLWA*AGTCIP Trigger: TGGAATGCAAGTCCCTGCCCAAGCCCAGAGCACACA...GTGAGGAGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CCA 90 bp | GCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTCCTGTGATGTACCTCTaGCCCAGACCAAGAGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: AKASISHRRLGILGLTPTPVMYL*PRPRGR Trigger: TCTGCCTCTTGGTCTGGGCCAGAGGTACATCACAGG...AGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR GCA 90 bp | AAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTCCTTCCTTTTCCTGGCAATaGAGCCGGAGGATCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: KASISHRRLGILGLTPTPSFSWQ*SRRILR Trigger: CCTGAGGATCCTCCGGCTGCATTGCCAGGAAAAGGA...AGGAGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR GCA 90 bp | TCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTCCTCACCAGCAGCTGTTCCTCGAATaGCAACCTCAGCTGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: SISHRRLGILGLTPTPHQQLFLE*QPQLSL Trigger: CAGAGACAGCTGAGGTTGGCATTCGAGGAACAGCTG...CTGGTGAGGAGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR GCA 90 bp | GGCAGAGTCAAGCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTCTTCCTTCAGCCTCTaGCGCTTCTGCTGCTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: GRVKPRLQSVTGDWGSWASSFSL*RFCCCC Trigger: ACAACAGCAGCAGAAGCGGCAGAGGCTGAAGGAAGA...GGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGCTTGACTCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CCA 90 bp | TTATTGAAAACCTGTGATGTACCTCTGGCCCAGACCAAGAGGCAGAGTCAAGCCGCAGGGCCTCACAGATaGTCCGGGCCTCTCCTAGGT | + |
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Preference number: 4 (lower is better) Translates to: LLKTCDVPLAQTKRQSQAAGPHR*SGPLLG Trigger: ACCTAGGAGAGGCCCGGACCATCTGTGAGGCCCTGC...GGCTTGACTCTGCCTCTTGGTCTGGGCCAGAGGTACATCACAGGTTTTCAATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CCA 90 bp | TCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTCCTCACCAGTGCACTCCTGCAACATaGTGTGCTTCCTGTGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: SISHRRLGILGLTPTPHQCTPAT*CASCVP Trigger: AGGCACACAGGAAGCACACCATGTTGCAGGAGTGCA...CTGGTGAGGAGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CCA 90 bp | AGAGGCAGAGTCAAGCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGCTTTGCCAGCCGCTCTaGCATGTGGAAGTCCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: RGRVKPRLQSVTGDWGSWLCQPL*HVEVPE Trigger: CTCTGGGACTTCCACATGCCAGAGCGGCTGGCAAAG...CCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGCTTGACTCTGCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CCA 90 bp | CAGAGTCAAGCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGCTCCTTTTAGGGGCTTaGGACTGGCCACATCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QSQAKASISHRRLGILGLLLLGA*DWPHLL Trigger: CAGGAGATGTGGCCAGTCCCAAGCCCCTAAAAGGAG...CAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGCTTGACTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CCA 90 bp | CAGAGTCAAGCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGTGGAGTGTGTCCTCCTaGCCTATGAGGACATCAGGC | + |
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Preference number: 4 (lower is better) Translates to: QSQAKASISHRRLGILGLWSVSS*PMRTSG Trigger: GCCTGATGTCCTCATAGGCCAGGAGGACACACTCCA...CAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGCTTGACTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR TCA 90 bp | GCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTAGCTCCTTTATTTCCTaGAAGCCCCTTGGGCTAAGG | + |
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Preference number: 4 (lower is better) Translates to: AKASISHRRLGILGLTPTSSFIS*KPLGLR Trigger: CCTTAGCCCAAGGGGCTTTCAGGAAATAAAGGAGCT...AGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR GCA 90 bp | TCAAGCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTCCTGCAACATGGTGTaGTTCCTGTGTGCCTCACTT | + |
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Preference number: 4 (lower is better) Translates to: SSQGFNQSQETGDLGPDPSCNMV*FLCASL Trigger: AAGTGAGGCACACAGGAAGCACACCATGTTGCAGGA...GGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR GCA 90 bp | AAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTCCTCTCTCCTTGCACTCCTaGAACATGGTGTGCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: KASISHRRLGILGLTPTPLSLHS*NMVCFL Trigger: CAGGAAGCACACCATGTTGCAGGAGTGCAAGGAGAG...AGGAGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR GCA 90 bp | GCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTCCTCACAGGCTTCCCACTTTCTaGAGCTTTTGCACCATTTCC | + |
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Preference number: 4 (lower is better) Translates to: ASISHRRLGILGLTPTPHRLPTF*SFCTIS Trigger: GGAAATGGTGCAAAAGCTGCAGAAAGTGGGAAGCCT...GTGAGGAGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR GCA 90 bp | TTGAAAACCTGTGATGTACCTCTGGCCCAGACCAAGAGGCAGAGTCAAGCCAAGGAGTCCAGTTCCTTCTaGAGGGCCTCACAGATGGTC | + |
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Preference number: 4 (lower is better) Translates to: LKTCDVPLAQTKRQSQAKESSSF*RASQMV Trigger: GACCATCTGTGAGGCCCTGCAGAAGGAACTGGACTC...CTTGGCTTGACTCTGCCTCTTGGTCTGGGCCAGAGGTACATCACAGGTTTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR GCA 90 bp | TTATTGAAAACCTGTGATGTACCTCTGGCCCAGACCAAGAGGCAGAGTCAAGCCAGGCCCTGCTTGGTGTaGAGCTCCAGGTCTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LLKTCDVPLAQTKRQSQARPCLV*SSRSFS Trigger: GGAGAAAGACCTGGAGCTGCACACCAAGCAGGGCCT...GGCTTGACTCTGCCTCTTGGTCTGGGCCAGAGGTACATCACAGGTTTTCAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CCA 90 bp | CAGAGTCAAGCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGTCACTTTCCTTTTCCTaGCAATGCAGCCGGAGGATC | + |
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Preference number: 4 (lower is better) Translates to: QSQAKASISHRRLGILGLSLSFS*QCSRRI Trigger: GATCCTCCGGCTGCATTGCCAGGAAAAGGAAAGTGA...CAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGCTTGACTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR TCA 90 bp | TTATTGAAAACCTGTGATGTACCTCTGGCCCAGACCAAGAGGCAGAGTCAAGCCCACAGGGAGCACAGCTaGTGCTTCACGTCTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LLKTCDVPLAQTKRQSQAHREHS*CFTSSS Trigger: ACTGGAAGACGTGAAGCATCAGCTGTGCTCCCTGTG...GGCTTGACTCTGCCTCTTGGTCTGGGCCAGAGGTACATCACAGGTTTTCAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR GCA 90 bp | GGCAGAGTCAAGCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCCAGAAATTCTCTCCTTaGACTCCTGCAACATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: GRVKPRLQSVTGDWGSWAQKFSP*TPATWC Trigger: ACACCATGTTGCAGGAGTGCAAGGAGAGAATTTCTG...GGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGCTTGACTCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR GCA 90 bp | TTATTGAAAACCTGTGATGTACCTCTGGCCCAGACCAAGAGGCAGAGTCAAGCCCTCTGCCGCTTCTGCTaGTGTTGTTGGCACTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: LLKTCDVPLAQTKRQSQALCRFC*CCWHFC Trigger: GCAGAAGTGCCAACAACAGCAGCAGAAGCGGCAGAG...GGCTTGACTCTGCCTCTTGGTCTGGGCCAGAGGTACATCACAGGTTTTCAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR GCA 90 bp | CAGAGTCAAGCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGGGGACTTGCATTCCATaGTTTTCCAGCTCTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: QSQAKASISHRRLGILGLGTCIP*FSSSSF Trigger: GAAGGAAGAGCTGGAAAAGCATGGAATGCAAGTCCC...CAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGCTTGACTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR TCA 90 bp | TTATTGAAAACCTGTGATGTACCTCTGGCCCAGACCAAGAGGCAGAGTCAAGCCTTTATTGAAAACCTGTaGTGTACCTCTGGCCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: LLKTCDVPLAQTKRQSQAFIENL*CTSGPD Trigger: GTCTGGGCCAGAGGTACATCACAGGTTTTCAATAAA...GGCTTGACTCTGCCTCTTGGTCTGGGCCAGAGGTACATCACAGGTTTTCAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS GCA 90 bp | GGACGTGTCCTGCCCTCCGGCCTTCTCAGCCCTGTCCACGGCTCCTaGGGTGGGCTCGGCCTTCGATGTCAGGGACCTCCCCGCCATTTC | + |
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Preference number: 5 (lower is better) Translates to: GRVLPSGLLSPVHGS*GGLGLRCQGPPRHF Trigger: GAAATGGCGGGGAGGTCCCTGACATCGAAGGCCGAGCCCACCGCAGGAGCCGTGGACAGGGCTGAGAAGGCCGGAGGGCAGGACACGTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000303903.10 ENST00000343131.7 ENST00000479535.2 |
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| CDS TCA 90 bp | TCAACTCGGGGCTCTAGGCTTCCCACTGCACGGAGGAAAGGAGGTTaGGTTGACAGGGCAGGCAGAGTTGGGGCGGTTGCCAGCCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: STRGSRLPTARRKGG*VDRAGRVGAVASLV Trigger: CACAAGGCTGGCAACCGCCCCAACTCTGCCTGCCCTGTCAACTCAACCTCCTTTCCTCCGTGCAGTGGGAAGCCTAGAGCCCCGAGTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479535.2 |
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| CDS TCA 90 bp | TCATCAAGGGTGGAGGGGCCCTCAGCCCCACACAGGGAGCACAGCTaGTGCTTCACGTCTTCCAGTGTCGCCTTGACCAGCTTCTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: SSRVEGPSAPHREHS*CFTSSSVALTSFSS Trigger: GGAAGAGAAGCTGGTCAAGGCGACACTGGAAGACGTGAAGCATCAGCTGTGCTCCCTGTGTGGGGCTGAGGGCCCCTCCACCCTTGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000303903.10 ENST00000343131.7 ENST00000368517.7 ENST00000479535.2 |
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| CDS CCA 90 bp | ACGCAACACAGATCTATTGAGTACCTCCTGCAAGCAGGTGCTCTGTaGGGCCCTCACGGGGCTCACGTTCTGGGTGGGCAAGACTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: TQHRSIEYLLQAGAL*GPHGAHVLGGQDWE Trigger: TTCCCAGTCTTGCCCACCCAGAACGTGAGCCCCGTGAGGGCCCCACAGAGCACCTGCTTGCAGGAGGTACTCAATAGATCTGTGTTGCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479535.2 |
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| CDS CCA 90 bp | TCTCACTTGGCACTGAGCCCCGCAAACCATGCAGCTGGTCCTAGCTaGCAGCCAAGGCCCCTGAACTCACCTTGCTGGACCTCATTAATC | + |
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Preference number: 5 (lower is better) Translates to: SHLALSPANHAAGPS*QPRPLNSPCWTSLI Trigger: GATTAATGAGGTCCAGCAAGGTGAGTTCAGGGGCCTTGGCTGCCAGCTAGGACCAGCTGCATGGTTTGCGGGGCTCAGTGCCAAGTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479535.2 |
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| CDS-3UTR CAA 90 bp | GCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTCCGCTTCTGCTGCTGTaGTTGGCACTTCTGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: AKASISHRRLGILGLTPTPLLLL*LALLLQ Trigger: CTGCAGCAGAAGTGCCAACAACAGCAGCAGAAGCGG...AGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CAA 90 bp | CAGAGTCAAGCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGAGGAGACTGGGGATCTaGGGCCTGACCCCTACTCCT | + |
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Preference number: 5 (lower is better) Translates to: QSQAKASISHRRLGILGLRRLGI*GLTPTP Trigger: AGGAGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCT...CAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGCTTGACTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CAA 90 bp | GCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTACCAGCTTCTCTTCCTaGAGCAGCTGCTCCTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: AKASISHRRLGILGLTPTTSFSS*SSCSLL Trigger: CAGCAAGGAGCAGCTGCTCAAGGAAGAGAAGCTGGT...AGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CAA 90 bp | TCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTCCTCACCAGTCTCCTTTTAGGGGCTaGGGACTGGCCACATCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SISHRRLGILGLTPTPHQSPFRG*GLATSP Trigger: AGGAGATGTGGCCAGTCCCAAGCCCCTAAAAGGAGA...CTGGTGAGGAGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CAA 90 bp | TCAAGCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTCTTCCAGTGTCGCCTaGACCAGCTTCTCTTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: SSQGFNQSQETGDLGPDPSSSVA*TSFSSL Trigger: CAAGGAAGAGAAGCTGGTCAAGGCGACACTGGAAGA...GGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS CCA 90 bp | TCCAGCTCTCCTTGCCAGGCTCTGCTGATAGCAGGGCCAGGATCATaGGCATGTAACTATGGCAGTCGCATGCTGAAATGCCCTGTACTT | + |
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Preference number: 5 (lower is better) Translates to: SSSPCQALLIAGPGS*ACNYGSRMLKCPVL Trigger: AAGTACAGGGCATTTCAGCATGCGACTGCCATAGTTACATGCCCATGATCCTGGCCCTGCTATCAGCAGAGCCTGGCAAGGAGAGCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479535.2 |
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| CDS-3UTR CAA 90 bp | TTGAAAACCTGTGATGTACCTCTGGCCCAGACCAAGAGGCAGAGTCAAGCCAAGGGGCACAAATCTCCTTaGCCAGCCGCTCTGGCATGT | + |
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Preference number: 5 (lower is better) Translates to: LKTCDVPLAQTKRQSQAKGHKSP*PAALAC Trigger: ACATGCCAGAGCGGCTGGCAAAGGAGATTTGTGCCC...CTTGGCTTGACTCTGCCTCTTGGTCTGGGCCAGAGGTACATCACAGGTTTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CAA 90 bp | TTATTGAAAACCTGTGATGTACCTCTGGCCCAGACCAAGAGGCAGAGTCAAGCCTTGTGTGCTCTGGGCTaGGGCAGGGACTTGCATTCC | + |
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Preference number: 5 (lower is better) Translates to: LLKTCDVPLAQTKRQSQALCALG*GRDLHS Trigger: GGAATGCAAGTCCCTGCCCAAGCCCAGAGCACACAA...GGCTTGACTCTGCCTCTTGGTCTGGGCCAGAGGTACATCACAGGTTTTCAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS GCA 90 bp | TGGCCTAGATTTTATAGAGTAGGAAACGAGGCTTCCAGCTCTCCTTaGCAGGCTCTGCTGATAGCAGGGCCAGGATCATGGGCATGTAAC | + |
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Preference number: 5 (lower is better) Translates to: WPRFYRVGNEASSSP*QALLIAGPGSWACN Trigger: GTTACATGCCCATGATCCTGGCCCTGCTATCAGCAGAGCCTGGCAAGGAGAGCTGGAAGCCTCGTTTCCTACTCTATAAAATCTAGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479535.2 |
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| CDS CCA 90 bp | CCAAATTCGTACATTGTGGGGCCTGAAATTAAACCCACATCTGCCTaGCCCCAAACCTCAGGCTGTGCCTCACACAAAGGAGACACACGA | + |
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Preference number: 5 (lower is better) Translates to: PNSYIVGPEIKPTSA*PQTSGCASHKGDTR Trigger: TCGTGTGTCTCCTTTGTGTGAGGCACAGCCTGAGGTTTGGGGCCAGGCAGATGTGGGTTTAATTTCAGGCCCCACAATGTACGAATTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479535.2 |
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| CDS-3UTR CAA 90 bp | TTATTGAAAACCTGTGATGTACCTCTGGCCCAGACCAAGAGGCAGAGTCAAGCCGGCTTGGGCAGGGACTaGCATTCCATGCTTTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: LLKTCDVPLAQTKRQSQAGLGRD*HSMLFQ Trigger: CTGGAAAAGCATGGAATGCAAGTCCCTGCCCAAGCC...GGCTTGACTCTGCCTCTTGGTCTGGGCCAGAGGTACATCACAGGTTTTCAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CAA 90 bp | AGAGGCAGAGTCAAGCCAAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGAGGGTCTCTTGTTTTTaGCTCAAGATCTCCTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: RGRVKPRLQSVTGDWGSWRVSCF*LKISFR Trigger: CCTGAAGGAGATCTTGAGCAAAAAACAAGAGACCCT...CCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTTGGCTTGACTCTGCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS-3UTR CAA 90 bp | AAGGCTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTGACCCCTACTCCTCTCAGCTGTCTCTGTTaGTTCTTCTCTTCTTCAATC | + |
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Preference number: 5 (lower is better) Translates to: KASISHRRLGILGLTPTPLSCLC*FFSSSI Trigger: GATTGAAGAAGAGAAGAACAAACAGAGACAGCTGAG...AGGAGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS GCA 90 bp | TCTTCTCTTCTTCAATCTGCAAGTTCAGGGCAGAAATTCTCTCCTTaGACTCCTGCAACATGGTGTGCTTCCTGTGTGCCTCACTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: SSLLQSASSGQKFSP*TPATWCASCVPHFP Trigger: AGGAAAGTGAGGCACACAGGAAGCACACCATGTTGCAGGAGTGCAAGGAGAGAATTTCTGCCCTGAACTTGCAGATTGAAGAAGAGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000303903.10 ENST00000343131.7 ENST00000368517.7 ENST00000479535.2 |
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| CDS GCA 90 bp | CAAACCTCAGGCTGTGCCTCACACAAAGGAGACACACGACCTTTCTaGAGCTTTTGCACCATTTCCATCAAGTCTTCAATTTTCTGTGAG | + |
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Preference number: 5 (lower is better) Translates to: QTSGCASHKGDTRPF*SFCTISIKSSIFCE Trigger: CTCACAGAAAATTGAAGACTTGATGGAAATGGTGCAAAAGCTGCAGAAAGGTCGTGTGTCTCCTTTGTGTGAGGCACAGCCTGAGGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479535.2 |
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| CDS CCA 90 bp | AAGAAAGAGAAGGTGAAGAGGATTATTTCCCAAATTCGTACATTGTaGGGCCTGAAATTAAACCCACATCTGCCTGGCCCCAAACCTCAG | + |
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Preference number: 5 (lower is better) Translates to: KKEKVKRIISQIRTL*GLKLNPHLPGPKPQ Trigger: CTGAGGTTTGGGGCCAGGCAGATGTGGGTTTAATTTCAGGCCCCACAATGTACGAATTTGGGAAATAATCCTCTTCACCTTCTCTTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479535.2 |
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| CDS TCA 72 bp | GTGGAGGGGCCCTCAGCCCCACACAGGGAGCACAGCTaGTGCTTCACGTCTTCCAGTGTCGCCTTGACCAGC | + |
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Preference number: 6 (lower is better) Translates to: VEGPSAPHREHS*CFTSSSVALTS Trigger: GCTGGTCAAGGCGACACTGGAAGACGTGAAGCATCAGCTGTGCTCCCTGTGTGGGGCTGAGGGCCCCTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000303903.10 ENST00000343131.7 ENST00000368517.7 ENST00000479535.2 |
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| CDS CCA 72 bp | CCCCTTGGGCTAAGGTCGGGGTGGAGTGTGTCCTCCTaGCCTATGAGGACATCAGGCCCTGCTTGGTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: PLGLRSGWSVSS*PMRTSGPAWCA Trigger: TGCACACCAAGCAGGGCCTGATGTCCTCATAGGCCAGGAGGACACACTCCACCCCGACCTTAGCCCAAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS TCA 72 bp | CTTTGGAACAAGGGACCCTGCATTCTCACTTGGCACTaGGCCCCGCAAACCATGCAGCTGGTCCTAGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: LWNKGPCILTWH*APQTMQLVLAG Trigger: GCCAGCTAGGACCAGCTGCATGGTTTGCGGGGCTCAGTGCCAAGTGAGAATGCAGGGTCCCTTGTTCCAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479535.2 |
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| CDS CAA 72 bp | TCCTGGGCCAGCCTCTTCCTCTTGTGTGCTCTGGGCTaGGGCAGGGACTTGCATTCCATGCTTTTCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: SWASLFLLCALG*GRDLHSMLFQL Trigger: GAGCTGGAAAAGCATGGAATGCAAGTCCCTGCCCAAGCCCAGAGCACACAAGAGGAAGAGGCTGGCCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000303903.10 ENST00000343131.7 ENST00000368517.7 ENST00000479535.2 |
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| CDS CCA 72 bp | CCTTGCCAGGCTCTGCTGATAGCAGGGCCAGGATCATaGGCATGTAACTATGGCAGTCGCATGCTGAAATGC | + |
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Preference number: 6 (lower is better) Translates to: PCQALLIAGPGS*ACNYGSRMLKC Trigger: GCATTTCAGCATGCGACTGCCATAGTTACATGCCCATGATCCTGGCCCTGCTATCAGCAGAGCCTGGCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479535.2 |
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| CDS GCA 72 bp | AGTGTCGCCTTGACCAGCTTCTCTTCCTTGAGCAGCTaGTCCTTGCTGCTGTCCAGGGCACAAATCTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: SVALTSFSSLSS*SLLLSRAQISF Trigger: AAAGGAGATTTGTGCCCTGGACAGCAGCAAGGAGCAGCTGCTCAAGGAAGAGAAGCTGGTCAAGGCGACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000303903.10 ENST00000343131.7 ENST00000368517.7 ENST00000479535.2 |
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| CDS TCA 72 bp | CTTCAATCAGTCACAGGAGACTGGGGATCTTGGGCCTaGCCCCTACTCCTCACCAGTAGACTTAGCTGTATC | + |
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Preference number: 6 (lower is better) Translates to: LQSVTGDWGSWA*PLLLTSRLSCI Trigger: GATACAGCTAAGTCTACTGGTGAGGAGTAGGGGTCAGGCCCAAGATCCCCAGTCTCCTGTGACTGATTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343131.7 |
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| CDS CCA 72 bp | TACATTGTGGGGCCTGAAATTAAACCCACATCTGCCTaGCCCCAAACCTCAGGCTGTGCCTCACACAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: YIVGPEIKPTSA*PQTSGCASHKG Trigger: TCCTTTGTGTGAGGCACAGCCTGAGGTTTGGGGCCAGGCAGATGTGGGTTTAATTTCAGGCCCCACAATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479535.2 |
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| CDS GCA 72 bp | TGCAAGTTCAGGGCAGAAATTCTCTCCTTGCACTCCTaGAACATGGTGTGCTTCCTGTGTGCCTCACTTTCC | + |
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Preference number: 6 (lower is better) Translates to: CKFRAEILSLHS*NMVCFLCASLS Trigger: GGAAAGTGAGGCACACAGGAAGCACACCATGTTGCAGGAGTGCAAGGAGAGAATTTCTGCCCTGAACTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000303903.10 ENST00000343131.7 ENST00000368517.7 ENST00000479535.2 |
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| CDS GCA 72 bp | CTTCAATCTGCAAGTTCAGGGCAGAAATTCTCTCCTTaGACTCCTGCAACATGGTGTGCTTCCTGTGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LQSASSGQKFSP*TPATWCASCVP Trigger: AGGCACACAGGAAGCACACCATGTTGCAGGAGTGCAAGGAGAGAATTTCTGCCCTGAACTTGCAGATTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000303903.10 ENST00000343131.7 ENST00000368517.7 ENST00000479535.2 |
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| CDS CAA 90 bp | TTCTTCTCTTCTTCAATCTGCAAGTTCAGGGCAGAAATTCTCTCCTaGCACTCCTGCAACATGGTGTGCTTCCTGTGTGCCTCACTTTCC | + |
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Preference number: 6 (lower is better) Translates to: FFSSSICKFRAEILS*HSCNMVCFLCASLS Trigger: GGAAAGTGAGGCACACAGGAAGCACACCATGTTGCAGGAGTGCAAGGAGAGAATTTCTGCCCTGAACTTGCAGATTGAAGAAGAGAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000303903.10 ENST00000343131.7 ENST00000368517.7 ENST00000479535.2 |
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| CDS GCA 72 bp | GGCTGTGCCTCACACAAAGGAGACACACGACCTTTCTaGAGCTTTTGCACCATTTCCATCAAGTCTTCAATT | + |
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Preference number: 6 (lower is better) Translates to: GCASHKGDTRPF*SFCTISIKSSI Trigger: AATTGAAGACTTGATGGAAATGGTGCAAAAGCTGCAGAAAGGTCGTGTGTCTCCTTTGTGTGAGGCACAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479535.2 |
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| CDS CCA 72 bp | AAGGTGAAGAGGATTATTTCCCAAATTCGTACATTGTaGGGCCTGAAATTAAACCCACATCTGCCTGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: KVKRIISQIRTL*GLKLNPHLPGP Trigger: GGGGCCAGGCAGATGTGGGTTTAATTTCAGGCCCCACAATGTACGAATTTGGGAAATAATCCTCTTCACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479535.2 |
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| CDS GCA 72 bp | TCATGGGCATGTAACTATGGCAGTCGCATGCTGAAATaGCCTGTACTTAATTTAAGGCTCTGCTGTTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SWACNYGSRMLK*PVLNLRLCCCC Trigger: ACAGCAACAGCAGAGCCTTAAATTAAGTACAGGGCATTTCAGCATGCGACTGCCATAGTTACATGCCCATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479535.2 |
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