RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SWAP70 (Homo sapiens)

Ensembl gene IDs: ENSG00000133789

Ensembl transcript IDs: ENST00000318950.11, ENST00000447399.6, ENST00000524817.5, ENST00000526358.5, ENST00000531814.5, ENST00000534562.1, ENST00000534662.1

Found 379 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAAAGCAGGCAGTCCTTAGGTGGATGGCCAGGGGCCAGGCAGTGTaGGGTCTCCAAGAACCCAGGGCTAGAGCAGCTAAGCCCCAGGTC +
Preference number: 1 (lower is better)
Translates to: RKQAVLRWMARGQAV*GLQEPRARAAKPQV
Trigger: GACCTGGGGCTTAGCTGCTCTAGCCCTGGGTTCTTGGAGACCTCACACTGCCTGGCCCCTGGCCATCCACCTAAGGACTGCCTGCTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318950.11
3UTR GCA 90 bp GATGCTGCTTCCTCCAGTTTCTTCCGCACGGCCTCCAGCTCCTGCTaGTTGCTTTCGTTGGCGGCCTGGAGTTCCTTCATTTGTCGCTCC +
Preference number: 1 (lower is better)
Translates to: DAASSSFFRTASSSC*LLSLAAWSSFICRS
Trigger: GGAGCGACAAATGAAGGAACTCCAGGCCGCCAACGAAAGCAAGCAGCAGGAGCTGGAGGCCGTGCGGAAGAAACTGGAGGAAGCAGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR CCA 90 bp TTCCGCACGGCCTCCAGCTCCTGCTGCTTGCTTTCGTTGGCGGCCTaGAGTTCCTTCATTTGTCGCTCCAGTTCCTCTTGTTCAGCCAGC +
Preference number: 1 (lower is better)
Translates to: FRTASSSCCLLSLAA*SSFICRSSSSCSAS
Trigger: GCTGGCTGAACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAGGCCGCCAACGAAAGCAAGCAGCAGGAGCTGGAGGCCGTGCGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR GCA 90 bp CACAGAGGTTCTGAGTACCCAGTGGCAGTGAGCCCCTCCAAACTCTaGAGAGCTGACTGTGCTGTCTGCACCCTGCCTCATTTGGGGAAG +
Preference number: 1 (lower is better)
Translates to: HRGSEYPVAVSPSKL*RADCAVCTLPHLGK
Trigger: CTTCCCCAAATGAGGCAGGGTGCAGACAGCACAGTCAGCTCTGCAGAGTTTGGAGGGGCTCACTGCCACTGGGTACTCAGAACCTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR GCA 90 bp CTGCTTCCTCCAGTTTCTTCCGCACGGCCTCCAGCTCCTGCTGCTTaGTTTCGTTGGCGGCCTGGAGTTCCTTCATTTGTCGCTCCAGTT +
Preference number: 1 (lower is better)
Translates to: LLPPVSSARPPAPAA*FRWRPGVPSFVAPV
Trigger: AACTGGAGCGACAAATGAAGGAACTCCAGGCCGCCAACGAAAGCAAGCAGCAGGAGCTGGAGGCCGTGCGGAAGAAACTGGAGGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR CCA 90 bp TCCTCTTGTTCAGCCAGCTGCTTCTTCCGGAGTTCTTTCCGACGCTaGCGGGCTTCTTTGTGTGGTGGAGGGCTGCCCAGCTTCAACAGA +
Preference number: 1 (lower is better)
Translates to: SSCSASCFFRSSFRR*RASLCGGGLPSFNR
Trigger: TCTGTTGAAGCTGGGCAGCCCTCCACCACACAAAGAAGCCCGCCAGCGTCGGAAAGAACTCCGGAAGAAGCAGCTGGCTGAACAAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR CCA 90 bp CCAGTTTCTTCCGCACGGCCTCCAGCTCCTGCTGCTTGCTTTCGTTaGCGGCCTGGAGTTCCTTCATTTGTCGCTCCAGTTCCTCTTGTT +
Preference number: 1 (lower is better)
Translates to: PVSSARPPAPAACFR*RPGVPSFVAPVPLV
Trigger: AACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAGGCCGCCAACGAAAGCAAGCAGCAGGAGCTGGAGGCCGTGCGGAAGAAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR GCA 90 bp GGCCTGAAGTTCCACTTGAGTCTGAAGGCGTTTCTTTTCCTCTTCTaGTGCACGAGATGCTGCTTCCTCCAGTTTCTTCCGCACGGCCTC +
Preference number: 1 (lower is better)
Translates to: GLKFHLSLKAFLFLF*CTRCCFLQFLPHGL
Trigger: GAGGCCGTGCGGAAGAAACTGGAGGAAGCAGCATCTCGTGCAGCAGAAGAGGAAAAGAAACGCCTTCAGACTCAAGTGGAACTTCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR GCA 90 bp TGGAGTTCCTTCATTTGTCGCTCCAGTTCCTCTTGTTCAGCCAGCTaGTTCTTCCGGAGTTCTTTCCGACGCTGGCGGGCTTCTTTGTGT +
Preference number: 1 (lower is better)
Translates to: WSSFICRSSSSCSAS*FFRSSFRRWRASLC
Trigger: ACACAAAGAAGCCCGCCAGCGTCGGAAAGAACTCCGGAAGAAGCAGCTGGCTGAACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR CCA 90 bp CTTCTTCCGGAGTTCTTTCCGACGCTGGCGGGCTTCTTTGTGTGGTaGAGGGCTGCCCAGCTTCAACAGATGAATAGTAGAATGAATGGC +
Preference number: 1 (lower is better)
Translates to: LLPEFFPTLAGFFVW*RAAQLQQMNSRMNG
Trigger: GCCATTCATTCTACTATTCATCTGTTGAAGCTGGGCAGCCCTCCACCACACAAAGAAGCCCGCCAGCGTCGGAAAGAACTCCGGAAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR TCA 90 bp ACAGCACATACTCGGAAAAGGAAACACGCTGCCAAAGGAAAGAGCTaGCATCCAGTCCACAGAGGTTCTGAGTACCCAGTGGCAGTGAGC +
Preference number: 1 (lower is better)
Translates to: TAHTRKRKHAAKGKS*HPVHRGSEYPVAVS
Trigger: GCTCACTGCCACTGGGTACTCAGAACCTCTGTGGACTGGATGTCAGCTCTTTCCTTTGGCAGCGTGTTTCCTTTTCCGAGTATGTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR GCA 90 bp GTCTCTTCATCTTGCCGGGCCTGTCTCTCATCTTCAAGAGCCTCCTaGAGCTTTAGGTACATGTCTTCCAGCTCCCGTACTCGCTGTAAA +
Preference number: 1 (lower is better)
Translates to: VSSSCRACLSSSRAS*SFRYMSSSSRTRCK
Trigger: TTTACAGCGAGTACGGGAGCTGGAAGACATGTACCTAAAGCTGCAGGAGGCTCTTGAAGATGAGAGACAGGCCCGGCAAGATGAAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR CCA 90 bp CTGCTTCTTCCGGAGTTCTTTCCGACGCTGGCGGGCTTCTTTGTGTaGTGGAGGGCTGCCCAGCTTCAACAGATGAATAGTAGAATGAAT +
Preference number: 1 (lower is better)
Translates to: LLLPEFFPTLAGFFV*WRAAQLQQMNSRMN
Trigger: ATTCATTCTACTATTCATCTGTTGAAGCTGGGCAGCCCTCCACCACACAAAGAAGCCCGCCAGCGTCGGAAAGAACTCCGGAAGAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR TCA 90 bp AGGATCACATTCCAAAAGGGCAACCAGGAAATGGCAATGACTCCATaGCTTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCA +
Preference number: 1 (lower is better)
Translates to: RITFQKGNQEMAMTP*LLCQSTNGQRHSMS
Trigger: TGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAAGTCATGGAGTCATTGCCATTTCCTGGTTGCCCTTTTGGAATGTGATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR CCA 90 bp CCAGGAAATGGCAATGACTCCATGACTTCTCTGTCAGAGCACCAATaGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCGAA +
Preference number: 1 (lower is better)
Translates to: PGNGNDSMTSLSEHQ*SKAFHVKCQEMESE
Trigger: TTCGCTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAAGTCATGGAGTCATTGCCATTTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR TCA 90 bp CTACTAACAGGATCACATTCCAAAAGGGCAACCAGGAAATGGCAATaGCTCCATGACTTCTCTGTCAGAGCACCAATGGTCAAAGGCATT +
Preference number: 1 (lower is better)
Translates to: LLTGSHSKRATRKWQ*LHDFSVRAPMVKGI
Trigger: AATGCCTTTGACCATTGGTGCTCTGACAGAGAAGTCATGGAGTCATTGCCATTTCCTGGTTGCCCTTTTGGAATGTGATCCTGTTAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR TCA 90 bp AGCTCCCGTACTCGCTGTAAATACTGTTCCAGTTCAGAGGACTTTTaGGCAACCTGTTCTTCCATCTGCTGTCTGATAAGCTTCTCTCTT +
Preference number: 1 (lower is better)
Translates to: SSRTRCKYCSSSEDF*ATCSSICCLISFSL
Trigger: AAGAGAGAAGCTTATCAGACAGCAGATGGAAGAACAGGTTGCTCAAAAGTCCTCTGAACTGGAACAGTATTTACAGCGAGTACGGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR TCA 90 bp ATTCACATATTCCATCATGATCCTCCCCACCATGCAGAGACTATTTaGCTCCTAAGGCCACACTGTTTCCATCCCATAGATTTCACAGAG +
Preference number: 1 (lower is better)
Translates to: IHIFHHDPPHHAETI*LLRPHCFHPIDFTE
Trigger: CTCTGTGAAATCTATGGGATGGAAACAGTGTGGCCTTAGGAGTCAAATAGTCTCTGCATGGTGGGGAGGATCATGATGGAATATGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318950.11
3UTR CCA 90 bp AGAATACTTTTTCCTCATTCTGGAATGAGGGATACTGGAGTCTTCTaGTGTAATGTGCAGTCAAACCACAGGAAAGGTTCCATTCCTTAC +
Preference number: 1 (lower is better)
Translates to: RILFPHSGMRDTGVF*CNVQSNHRKGSIPY
Trigger: GTAAGGAATGGAACCTTTCCTGTGGTTTGACTGCACATTACACCAGAAGACTCCAGTATCCCTCATTCCAGAATGAGGAAAAAGTATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318950.11
3UTR GCA 90 bp CAGCTGTGGAATAAGCCAGGTTTAAAGAAGGACATTCTGCAAAAGTaGAGGACCTATTTCACAACTTCTAGAAGTAGAAATTCACATATT +
Preference number: 1 (lower is better)
Translates to: QLWNKPGLKKDILQK*RTYFTTSRSRNSHI
Trigger: AATATGTGAATTTCTACTTCTAGAAGTTGTGAAATAGGTCCTGCACTTTTGCAGAATGTCCTTCTTTAAACCTGGCTTATTCCACAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318950.11
3UTR GCA 90 bp AATATAAGTTCATTAAAGACTTCATTAATTGCCATAGACACAGTCTaGCGGTCCATGCCTTTGCTAAACTGTCCATTTCCAATAAGCTCA +
Preference number: 1 (lower is better)
Translates to: NISSLKTSLIAIDTV*RSMPLLNCPFPISS
Trigger: TGAGCTTATTGGAAATGGACAGTTTAGCAAAGGCATGGACCGGCAGACTGTGTCTATGGCAATTAATGAAGTCTTTAATGAACTTATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
3UTR CCA 90 bp CTTTCTTATCCTTCAGATCCTCACTCACATAGTAAGAAATTATGTTaGGTTTTAGTACAAACCATCTTTCAGTCCAGTTTTTCCGTCTGT +
Preference number: 1 (lower is better)
Translates to: LSYPSDPHSHSKKLC*VLVQTIFQSSFSVC
Trigger: ACAGACGGAAAAACTGGACTGAAAGATGGTTTGTACTAAAACCCAACATAATTTCTTACTATGTGAGTGAGGATCTGAAGGATAAGAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR CAA 90 bp GCTGCTTCCTCCAGTTTCTTCCGCACGGCCTCCAGCTCCTGCTGCTaGCTTTCGTTGGCGGCCTGGAGTTCCTTCATTTGTCGCTCCAGT +
Preference number: 2 (lower is better)
Translates to: AASSSFFRTASSSCC*LSLAAWSSFICRSS
Trigger: ACTGGAGCGACAAATGAAGGAACTCCAGGCCGCCAACGAAAGCAAGCAGCAGGAGCTGGAGGCCGTGCGGAAGAAACTGGAGGAAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR CAA 90 bp TTCGTTGGCGGCCTGGAGTTCCTTCATTTGTCGCTCCAGTTCCTCTaGTTCAGCCAGCTGCTTCTTCCGGAGTTCTTTCCGACGCTGGCG +
Preference number: 2 (lower is better)
Translates to: FVGGLEFLHLSLQFL*FSQLLLPEFFPTLA
Trigger: CGCCAGCGTCGGAAAGAACTCCGGAAGAAGCAGCTGGCTGAACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAGGCCGCCAACGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR CAA 90 bp CAGCTCCTGCTGCTTGCTTTCGTTGGCGGCCTGGAGTTCCTTCATTaGTCGCTCCAGTTCCTCTTGTTCAGCCAGCTGCTTCTTCCGGAG +
Preference number: 2 (lower is better)
Translates to: QLLLLAFVGGLEFLH*SLQFLLFSQLLLPE
Trigger: CTCCGGAAGAAGCAGCTGGCTGAACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAGGCCGCCAACGAAAGCAAGCAGCAGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR CAA 90 bp TCCAGTTTCTTCCGCACGGCCTCCAGCTCCTGCTGCTTGCTTTCGTaGGCGGCCTGGAGTTCCTTCATTTGTCGCTCCAGTTCCTCTTGT +
Preference number: 2 (lower is better)
Translates to: SSFFRTASSSCCLLS*AAWSSFICRSSSSC
Trigger: ACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAGGCCGCCAACGAAAGCAAGCAGCAGGAGCTGGAGGCCGTGCGGAAGAAACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR-3UTR TCA 90 bp CATCCAGTCCACAGAGGTTCTGAGTACCCAGTGGCAGTGAGCCCCTCCAAACTCTGGAGTACAACGGCATaGTCTCAGCTCGCTGCAACC +
Preference number: 2 (lower is better)
Translates to: HPVHRGSEYPVAVSPSKLWSTTA*SQLAAT
Trigger: GGTTGCAGCGAGCTGAGATCATGCCGTTGTACTCCA...GAGTTTGGAGGGGCTCACTGCCACTGGGTACTCAGAACCTCTGTGGACTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR-3UTR GCA 90 bp AGGCAGTGTGAGGTCTCCAAGAACCCAGGGCTAGAGCAGCTAAGCCCCAGGTCAGTGCTGTCTGCACCCTaGCTCATTTGGGGAAGAATC +
Preference number: 2 (lower is better)
Translates to: RQCEVSKNPGLEQLSPRSVLSAP*LIWGRI
Trigger: GATTCTTCCCCAAATGAGGCAGGGTGCAGACAGCAC...TGACCTGGGGCTTAGCTGCTCTAGCCCTGGGTTCTTGGAGACCTCACACTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318950.11
3UTR-3UTR CCA 90 bp AGGCAGTGTGAGGTCTCCAAGAACCCAGGGCTAGAGCAGCTAAGCCCCAGGTCACTGTCAGAGCACCAATaGTCAAAGGCATTCCATGTC +
Preference number: 2 (lower is better)
Translates to: RQCEVSKNPGLEQLSPRSLSEHQ*SKAFHV
Trigger: GACATGGAATGCCTTTGACCATTGGTGCTCTGACAG...TGACCTGGGGCTTAGCTGCTCTAGCCCTGGGTTCTTGGAGACCTCACACTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318950.11
3UTR-3UTR CCA 90 bp AGGCAGTGTGAGGTCTCCAAGAACCCAGGGCTAGAGCAGCTAAGCCCCAGGTCAAATCCTCTCACAGCCTaGCATATACTTGGTAGCACA +
Preference number: 2 (lower is better)
Translates to: RQCEVSKNPGLEQLSPRSNPLTA*HILGST
Trigger: TGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATT...TGACCTGGGGCTTAGCTGCTCTAGCCCTGGGTTCTTGGAGACCTCACACTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318950.11
3UTR-3UTR CCA 90 bp AGGCAGTGTGAGGTCTCCAAGAACCCAGGGCTAGAGCAGCTAAGCCCCAGGTCAATACTGATAAATGGCTaGGCAGAAATCCAACACCCA +
Preference number: 2 (lower is better)
Translates to: RQCEVSKNPGLEQLSPRSILING*AEIQHP
Trigger: TGGGTGTTGGATTTCTGCCCAGCCATTTATCAGTAT...TGACCTGGGGCTTAGCTGCTCTAGCCCTGGGTTCTTGGAGACCTCACACTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318950.11
3UTR CAA 90 bp CTTCTCTCTTTCCAGCTCTGTGCTGAACCTGGCCTGAAGTTCCACTaGAGTCTGAAGGCGTTTCTTTTCCTCTTCTGCTGCACGAGATGC +
Preference number: 2 (lower is better)
Translates to: LLSFQLCAEPGLKFH*SLKAFLFLFCCTRC
Trigger: GCATCTCGTGCAGCAGAAGAGGAAAAGAAACGCCTTCAGACTCAAGTGGAACTTCAGGCCAGGTTCAGCACAGAGCTGGAAAGAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR-3UTR TCA 90 bp GCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCGAACCAGTCCACAGAGGTTCTaGGTACCCAGTGGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: APMVKGIPCQVSGNGKRTSPQRF*VPSGSE
Trigger: CTCACTGCCACTGGGTACTCAGAACCTCTGTGGACT...GGTTCGCTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR-3UTR GCA 90 bp CATCCAGTCCACAGAGGTTCTGAGTACCCAGTGGCAGTGAGCCCCTCCAAACTCAAAGCTCTCCTGCCATaGAGTATCTACATAACTGAC +
Preference number: 2 (lower is better)
Translates to: HPVHRGSEYPVAVSPSKLKALLP*SIYITD
Trigger: GTCAGTTATGTAGATACTGCATGGCAGGAGAGCTTT...GAGTTTGGAGGGGCTCACTGCCACTGGGTACTCAGAACCTCTGTGGACTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR-3UTR TCA 90 bp CTTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAGTACAACGGCATaGTCTCAGCTCGCTGCAACC +
Preference number: 2 (lower is better)
Translates to: LLCQSTNGQRHSMSSVRKWSTTA*SQLAAT
Trigger: GGTTGCAGCGAGCTGAGATCATGCCGTTGTACTCCA...TTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR-3UTR TCA 90 bp GTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCAAACTCTGCAGAGCTaGCTGTGCTGTCTGCACCCT +
Preference number: 2 (lower is better)
Translates to: VRAPMVKGIPCQVSGNGKQTLQS*LCCLHP
Trigger: AGGGTGCAGACAGCACAGTCAGCTCTGCAGAGTTTG...CTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR-3UTR TCA 90 bp ATGGCTGGGCAGAAATCCAACACCCAAATCAGCTGTCAAATTTCAAAGGCACATAGTACCCAGTGGCAGTaGGCCCCTCCAAACTCTGCA +
Preference number: 2 (lower is better)
Translates to: MAGQKSNTQISCQISKAHSTQWQ*APPNSA
Trigger: TGCAGAGTTTGGAGGGGCTCACTGCCACTGGGTACT...ATGTGCCTTTGAAATTTGACAGCTGATTTGGGTGTTGGATTTCTGCCCAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318950.11
3UTR-3UTR TCA 90 bp GTTAGACGTATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAAAGTACCCAGTGGCAGTaGGCCCCTCCAAACTCTGCA +
Preference number: 2 (lower is better)
Translates to: VRRISVGYFLRCHHRGRESTQWQ*APPNSA
Trigger: TGCAGAGTTTGGAGGGGCTCACTGCCACTGGGTACT...TTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATACGTCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR-3UTR TCA 90 bp CTTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAAAGTCCACAGAGGTTCTaGGTACCCAGTGGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: LLCQSTNGQRHSMSSVRKSPQRF*VPSGSE
Trigger: CTCACTGCCACTGGGTACTCAGAACCTCTGTGGACT...TTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR-3UTR GCA 90 bp GTTAGACGTATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAAGCTGACTGTGCTGTCTaGACCCTGCCTCATTTGGGG +
Preference number: 2 (lower is better)
Translates to: VRRISVGYFLRCHHRGREADCAV*TLPHLG
Trigger: CCCCAAATGAGGCAGGGTGCAGACAGCACAGTCAGC...TTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATACGTCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR-3UTR GCA 90 bp TATAATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGGCTGACTGTGCTGTCTaGACCCTGCCTCATTTGGGG +
Preference number: 2 (lower is better)
Translates to: YNPLTAWHILGSTSFTREADCAV*TLPHLG
Trigger: CCCCAAATGAGGCAGGGTGCAGACAGCACAGTCAGC...CTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR-3UTR GCA 90 bp TTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATAGCCCCTCCAAACTCTaGAGAGCTGACTGTGCTGTC +
Preference number: 2 (lower is better)
Translates to: FSVRAPMVKGIPCQVSGNSPSKL*RADCAV
Trigger: GACAGCACAGTCAGCTCTGCAGAGTTTGGAGGGGCT...ATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR CAA 90 bp TCCAAACTCTGCAGAGCTGACTGTGCTGTCTGCACCCTGCCTCATTaGGGGAAGAATCTGAGAGAGCTAAAAGACAAATTTCAGAAGGTG +
Preference number: 2 (lower is better)
Translates to: SKLCRADCAVCTLPH*GKNLRELKDKFQKV
Trigger: CACCTTCTGAAATTTGTCTTTTAGCTCTCTCAGATTCTTCCCCAAATGAGGCAGGGTGCAGACAGCACAGTCAGCTCTGCAGAGTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR-3UTR GCA 90 bp TATAATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGCCCCTCCAAACTCTaGAGAGCTGACTGTGCTGTC +
Preference number: 2 (lower is better)
Translates to: YNPLTAWHILGSTSFTRESPSKL*RADCAV
Trigger: GACAGCACAGTCAGCTCTGCAGAGTTTGGAGGGGCT...CTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR-3UTR CCA 90 bp CAGCTAAGCCCCAGGTCATGTTATCAGCTACAGCTGTGGAATAAGCCAGGTTTATCAAGTGTCAGGAAATaGAAAGCGAACCGGCCAATC +
Preference number: 2 (lower is better)
Translates to: QLSPRSCYQLQLWNKPGLSSVRK*KANRPI
Trigger: GATTGGCCGGTTCGCTTTCCATTTCCTGACACTTGA...TAAACCTGGCTTATTCCACAGCTGTAGCTGATAACATGACCTGGGGCTTAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318950.11
3UTR-3UTR TCA 90 bp CTTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAACAGTATCTACATAACTaGCGTGACTGCCAGCAAGCT +
Preference number: 2 (lower is better)
Translates to: LLCQSTNGQRHSMSSVRKQYLHN*RDCQQA
Trigger: AGCTTGCTGGCAGTCACGTCAGTTATGTAGATACTG...TTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR-3UTR TCA 90 bp CTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTACGAGACAGTATCTACATAACTaGCGTGACTGCCAGCAAGCT +
Preference number: 2 (lower is better)
Translates to: LTAWHILGSTSFTRESTRQYLHN*RDCQQA
Trigger: AGCTTGCTGGCAGTCACGTCAGTTATGTAGATACTG...TCTCGTACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR-3UTR TCA 90 bp TATAATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGGCCAAAGGAAAGAGCTaGCATCCAGTCCACAGAGGT +
Preference number: 2 (lower is better)
Translates to: YNPLTAWHILGSTSFTREAKGKS*HPVHRG
Trigger: ACCTCTGTGGACTGGATGTCAGCTCTTTCCTTTGGC...CTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR-3UTR TCA 90 bp TATAATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGATGGCAATGACTCCATaGCTTCTCTGTCAGAGCACC +
Preference number: 2 (lower is better)
Translates to: YNPLTAWHILGSTSFTREMAMTP*LLCQST
Trigger: GGTGCTCTGACAGAGAAGTCATGGAGTCATTGCCAT...CTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATTATA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR-3UTR TCA 90 bp ATGCACTCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTAACCAGGAAATGGCAATaGCTCCATGACTTCTCTGTC +
Preference number: 2 (lower is better)
Translates to: MHSASTSIRTPEVLCPHLTRKWQ*LHDFSV
Trigger: GACAGAGAAGTCATGGAGTCATTGCCATTTCCTGGT...TAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGAGTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR-3UTR GCA 90 bp TACTCGGAAAAGGAAACACGCTGCCAAAGGAAAGAGCTGACATCCAGTCCACAGCAGGTAACCCTTGTTTaGAGGAAGATAAATAAGAAG +
Preference number: 2 (lower is better)
Translates to: YSEKETRCQRKELTSSPQQVTLV*RKINKK
Trigger: CTTCTTATTTATCTTCCTGCAAACAAGGGTTACCTG...CTGTGGACTGGATGTCAGCTCTTTCCTTTGGCAGCGTGTTTCCTTTTCCGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR-3UTR GCA 90 bp AAGACTTCATTAATTGCCATAGACACAGTCTGCCGGTCCATGCCTTTGCTAAACTCAAATTGTTCTTGCTaGCAACCTCCTCCCATAGCT +
Preference number: 2 (lower is better)
Translates to: KTSLIAIDTVCRSMPLLNSNCSC*QPPPIA
Trigger: AGCTATGGGAGGAGGTTGGCAGCAAGAACAATTTGA...GTTTAGCAAAGGCATGGACCGGCAGACTGTGTCTATGGCAATTAATGAAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
3UTR-3UTR CCA 90 bp TCTTTTCAGGTAACCCTTGTTTGCAGGAAGATAAATAAGAAGGCTTCCTTAGGACTTTCGTTGGCGGCCTaGAGTTCCTTCATTTGTCGC +
Preference number: 2 (lower is better)
Translates to: SFQVTLVCRKINKKASLGLSLAA*SSFICR
Trigger: GCGACAAATGAAGGAACTCCAGGCCGCCAACGAAAG...TCCTAAGGAAGCCTTCTTATTTATCTTCCTGCAAACAAGGGTTACCTGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR-3UTR CCA 90 bp TATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAAAAAGCAGAAATCCTCTCACAGCCTaGCATATACTTGGTAGCACA +
Preference number: 2 (lower is better)
Translates to: YFCWIFPPLSPQRKGKSRNPLTA*HILGST
Trigger: TGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATT...TCTGCTTTTTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR CAA 90 bp AAGACTTCATTAATTGCCATAGACACAGTCTGCCGGTCCATGCCTTaGCTAAACTGTCCATTTCCAATAAGCTCAATAAGTTCCCATGCA +
Preference number: 2 (lower is better)
Translates to: KTSLIAIDTVCRSMP*LNCPFPISSISSHA
Trigger: TGCATGGGAACTTATTGAGCTTATTGGAAATGGACAGTTTAGCAAAGGCATGGACCGGCAGACTGTGTCTATGGCAATTAATGAAGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
3UTR-3UTR TCA 90 bp ATCTTAGTAGAAGCTAGAAAACCTCTACTAACAGGATCACATTCCAAAAGGGCAACCAGGAAATGGCAATaGCTCCATGACTTCTCTGTC +
Preference number: 2 (lower is better)
Translates to: ILVEARKPLLTGSHSKRATRKWQ*LHDFSV
Trigger: GACAGAGAAGTCATGGAGTCATTGCCATTTCCTGGT...TGCCCTTTTGGAATGTGATCCTGTTAGTAGAGGTTTTCTAGCTTCTACTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR-3UTR GCA 90 bp TATAATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAAAGCTCTCCTGCCATaGAGTATCTACATAACTGAC +
Preference number: 2 (lower is better)
Translates to: YNPLTAWHILGSTSFTREKALLP*SIYITD
Trigger: GTCAGTTATGTAGATACTGCATGGCAGGAGAGCTTT...CTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR-3UTR GCA 90 bp ATGGCTGGGCAGAAATCCAACACCCAAATCAGCTGTCAAATTTCAAAGGCACATATTGCTTTCTTAGTATaGACTCAGCAAGCACTAGCA +
Preference number: 2 (lower is better)
Translates to: MAGQKSNTQISCQISKAHIAFLV*TQQALA
Trigger: TGCTAGTGCTTGCTGAGTGCATACTAAGAAAGCAAT...ATGTGCCTTTGAAATTTGACAGCTGATTTGGGTGTTGGATTTCTGCCCAGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318950.11
3UTR-3UTR GCA 90 bp AGTTCATTAAAGACTTCATTAATTGCCATAGACACAGTCTGCCGGTCCATGCCTTGTTCAAATTGTTCTTaGTGCCAACCTCCTCCCATA +
Preference number: 2 (lower is better)
Translates to: SSLKTSLIAIDTVCRSMPCSNCS*CQPPPI
Trigger: TATGGGAGGAGGTTGGCAGCAAGAACAATTTGAACA...AGGCATGGACCGGCAGACTGTGTCTATGGCAATTAATGAAGTCTTTAATGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
3UTR-3UTR GCA 90 bp ATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTACAGGTAACCCTTGTTTaGAGGAAGATAAATAAGAAG +
Preference number: 2 (lower is better)
Translates to: ILSQPGIYLVAHHSLERVQVTLV*RKINKK
Trigger: CTTCTTATTTATCTTCCTGCAAACAAGGGTTACCTG...TACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR CAA 90 bp TTCTTTCTACTACTCAGTATAATCCTCTCACAGCCTGGCATATACTaGGTAGCACATCATTCACTAGAGAGAGTACGAGAGAAAATTAGG +
Preference number: 2 (lower is better)
Translates to: FFLLLSIILSQPGIY*VAHHSLERVREKIR
Trigger: CCTAATTTTCTCTCGTACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATTATACTGAGTAGTAGAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR CAA 90 bp GATTCACAAGTATCTATCTTAGCCAAAGCACTGTTTAAAAGGATATaGCCTCCTAGACATAGTGCCACTGAAAACCAAGATGTAAATCGG +
Preference number: 2 (lower is better)
Translates to: DSQVSILAKALFKRI*PPRHSATENQDVNR
Trigger: CCGATTTACATCTTGGTTTTCAGTGGCACTATGTCTAGGAGGCAATATCCTTTTAAACAGTGCTTTGGCTAAGATAGATACTTGTGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318950.11
3UTR CCA 72 bp TCAGCCAGCTGCTTCTTCCGGAGTTCTTTCCGACGCTaGCGGGCTTCTTTGTGTGGTGGAGGGCTGCCCAGC +
Preference number: 3 (lower is better)
Translates to: SASCFFRSSFRR*RASLCGGGLPS
Trigger: GCTGGGCAGCCCTCCACCACACAAAGAAGCCCGCCAGCGTCGGAAAGAACTCCGGAAGAAGCAGCTGGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR GCA 72 bp GCTTCCTCCAGTTTCTTCCGCACGGCCTCCAGCTCCTaGTGCTTGCTTTCGTTGGCGGCCTGGAGTTCCTTC +
Preference number: 3 (lower is better)
Translates to: ASSSFFRTASSS*CLLSLAAWSSF
Trigger: GAAGGAACTCCAGGCCGCCAACGAAAGCAAGCAGCAGGAGCTGGAGGCCGTGCGGAAGAAACTGGAGGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR TCA 72 bp CCCAAGCTGGAGTACAACGGCATGATCTCAGCTCGCTaGAGCTTCCGCACTGTCTCTTCATCTTGCCGGGCC +
Preference number: 3 (lower is better)
Translates to: PKLEYNGMISAR*SFRTVSSSCRA
Trigger: GGCCCGGCAAGATGAAGAGACAGTGCGGAAGCTTCAGCGAGCTGAGATCATGCCGTTGTACTCCAGCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR GCA 72 bp TCTGAGTACCCAGTGGCAGTGAGCCCCTCCAAACTCTaGAGAGCTGACTGTGCTGTCTGCACCCTGCCTCAT +
Preference number: 3 (lower is better)
Translates to: SEYPVAVSPSKL*RADCAVCTLPH
Trigger: ATGAGGCAGGGTGCAGACAGCACAGTCAGCTCTGCAGAGTTTGGAGGGGCTCACTGCCACTGGGTACTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR GCA 72 bp CCAGTTTCTTCCGCACGGCCTCCAGCTCCTGCTGCTTaGTTTCGTTGGCGGCCTGGAGTTCCTTCATTTGTC +
Preference number: 3 (lower is better)
Translates to: PVSSARPPAPAA*FRWRPGVPSFV
Trigger: GACAAATGAAGGAACTCCAGGCCGCCAACGAAAGCAAGCAGCAGGAGCTGGAGGCCGTGCGGAAGAAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR CCA 72 bp CCGGAGTTCTTTCCGACGCTGGCGGGCTTCTTTGTGTaGTGGAGGGCTGCCCAGCTTCAACAGATGAATAGT +
Preference number: 3 (lower is better)
Translates to: PEFFPTLAGFFV*WRAAQLQQMNS
Trigger: ACTATTCATCTGTTGAAGCTGGGCAGCCCTCCACCACACAAAGAAGCCCGCCAGCGTCGGAAAGAACTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR CCA 72 bp GCCTCCAGCTCCTGCTGCTTGCTTTCGTTGGCGGCCTaGAGTTCCTTCATTTGTCGCTCCAGTTCCTCTTGT +
Preference number: 3 (lower is better)
Translates to: ASSSCCLLSLAA*SSFICRSSSSC
Trigger: ACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAGGCCGCCAACGAAAGCAAGCAGCAGGAGCTGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR GCA 72 bp CTGAAGGCGTTTCTTTTCCTCTTCTGCTGCACGAGATaGTGCTTCCTCCAGTTTCTTCCGCACGGCCTCCAG +
Preference number: 3 (lower is better)
Translates to: LKAFLFLFCCTR*CFLQFLPHGLQ
Trigger: CTGGAGGCCGTGCGGAAGAAACTGGAGGAAGCAGCATCTCGTGCAGCAGAAGAGGAAAAGAAACGCCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR TCA 72 bp ACTCGGAAAAGGAAACACGCTGCCAAAGGAAAGAGCTaGCATCCAGTCCACAGAGGTTCTGAGTACCCAGTG +
Preference number: 3 (lower is better)
Translates to: TRKRKHAAKGKS*HPVHRGSEYPV
Trigger: CACTGGGTACTCAGAACCTCTGTGGACTGGATGTCAGCTCTTTCCTTTGGCAGCGTGTTTCCTTTTCCGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR-3UTR CAA 90 bp CTTGAGTCTGAAGGCGTTTCTTTTCCTCTTCTGCTGCACGAGATGCTGCTTCCTCTGGAGTTCCTTCATTaGTCGCTCCAGTTCCTCTTG +
Preference number: 3 (lower is better)
Translates to: LESEGVSFPLLLHEMLLPLEFLH*SLQFLL
Trigger: CAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAG...AGGAAGCAGCATCTCGTGCAGCAGAAGAGGAAAAGAAACGCCTTCAGACTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR GCA 72 bp TTCCACTTGAGTCTGAAGGCGTTTCTTTTCCTCTTCTaGTGCACGAGATGCTGCTTCCTCCAGTTTCTTCCG +
Preference number: 3 (lower is better)
Translates to: FHLSLKAFLFLF*CTRCCFLQFLP
Trigger: CGGAAGAAACTGGAGGAAGCAGCATCTCGTGCAGCAGAAGAGGAAAAGAAACGCCTTCAGACTCAAGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR-3UTR CAA 90 bp ATGCACTCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTATGGATATTTCCTCCGTaGTCACCACAGAGGAAGGGA +
Preference number: 3 (lower is better)
Translates to: MHSASTSIRTPEVLCPHLWIFPP*SPQRKG
Trigger: TCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCA...TAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGAGTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR TCA 72 bp TTCCAAAAGGGCAACCAGGAAATGGCAATGACTCCATaGCTTCTCTGTCAGAGCACCAATGGTCAAAGGCAT +
Preference number: 3 (lower is better)
Translates to: FQKGNQEMAMTP*LLCQSTNGQRH
Trigger: ATGCCTTTGACCATTGGTGCTCTGACAGAGAAGTCATGGAGTCATTGCCATTTCCTGGTTGCCCTTTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR TCA 72 bp TTCCATCATGATCCTCCCCACCATGCAGAGACTATTTaGCTCCTAAGGCCACACTGTTTCCATCCCATAGAT +
Preference number: 3 (lower is better)
Translates to: FHHDPPHHAETI*LLRPHCFHPID
Trigger: ATCTATGGGATGGAAACAGTGTGGCCTTAGGAGTCAAATAGTCTCTGCATGGTGGGGAGGATCATGATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318950.11
3UTR-3UTR CAA 90 bp CTTGAGTCTGAAGGCGTTTCTTTTCCTCTTCTGCTGCACGAGATGCTGCTTCCTAGTAGAATGAATGGCTaGAATCCACTCCTGTTTCTT +
Preference number: 3 (lower is better)
Translates to: LESEGVSFPLLLHEMLLPSRMNG*NPLLFL
Trigger: AAGAAACAGGAGTGGATTCAAGCCATTCATTCTACT...AGGAAGCAGCATCTCGTGCAGCAGAAGAGGAAAAGAAACGCCTTCAGACTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR CCA 72 bp TTTCCTCATTCTGGAATGAGGGATACTGGAGTCTTCTaGTGTAATGTGCAGTCAAACCACAGGAAAGGTTCC +
Preference number: 3 (lower is better)
Translates to: FPHSGMRDTGVF*CNVQSNHRKGS
Trigger: GGAACCTTTCCTGTGGTTTGACTGCACATTACACCAGAAGACTCCAGTATCCCTCATTCCAGAATGAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318950.11
3UTR-3UTR CAA 90 bp ATGGCTGGGCAGAAATCCAACACCCAAATCAGCTGTCAAATTTCAAAGGCACATCGAGAGAAAATTAGGTaGACAATATGGGGCAAAGGG +
Preference number: 3 (lower is better)
Translates to: MAGQKSNTQISCQISKAHREKIR*TIWGKG
Trigger: CCCTTTGCCCCATATTGTCAACCTAATTTTCTCTCG...ATGTGCCTTTGAAATTTGACAGCTGATTTGGGTGTTGGATTTCTGCCCAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318950.11
3UTR-3UTR CAA 90 bp ATGGCTGGGCAGAAATCCAACACCCAAATCAGCTGTCAAATTTCAAAGGCACATCAGCCTGGCATATACTaGGTAGCACATCATTCACTA +
Preference number: 3 (lower is better)
Translates to: MAGQKSNTQISCQISKAHQPGIY*VAHHSL
Trigger: TAGTGAATGATGTGCTACCAAGTATATGCCAGGCTG...ATGTGCCTTTGAAATTTGACAGCTGATTTGGGTGTTGGATTTCTGCCCAGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318950.11
3UTR-3UTR CAA 90 bp GTTAGACGTATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAACAGCCTGGCATATACTaGGTAGCACATCATTCACTA +
Preference number: 3 (lower is better)
Translates to: VRRISVGYFLRCHHRGREQPGIY*VAHHSL
Trigger: TAGTGAATGATGTGCTACCAAGTATATGCCAGGCTG...TTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATACGTCTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR TCA 72 bp ACTCGCTGTAAATACTGTTCCAGTTCAGAGGACTTTTaGGCAACCTGTTCTTCCATCTGCTGTCTGATAAGC +
Preference number: 3 (lower is better)
Translates to: TRCKYCSSSEDF*ATCSSICCLIS
Trigger: GCTTATCAGACAGCAGATGGAAGAACAGGTTGCTCAAAAGTCCTCTGAACTGGAACAGTATTTACAGCGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR-3UTR CAA 90 bp AAAGACTTCATTAATTGCCATAGACACAGTCTGCCGGTCCATGCCTTTGCTAAAATGTTCAAATTGTTCTaGCTGCCAACCTCCTCCCAT +
Preference number: 3 (lower is better)
Translates to: KDFINCHRHSLPVHAFAKMFKLF*LPTSSH
Trigger: ATGGGAGGAGGTTGGCAGCAAGAACAATTTGAACAT...TTTAGCAAAGGCATGGACCGGCAGACTGTGTCTATGGCAATTAATGAAGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526358.5
3UTR CCA 72 bp CTTCTTTCTACTACTCAGTATAATCCTCTCACAGCCTaGCATATACTTGGTAGCACATCATTCACTAGAGAG +
Preference number: 3 (lower is better)
Translates to: LLSTTQYNPLTA*HILGSTSFTRE
Trigger: CTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATTATACTGAGTAGTAGAAAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR-3UTR CAA 90 bp AAGACTTCATTAATTGCCATAGACACAGTCTGCCGGTCCATGCCTTTGCTAAACTTTATAATGTTCAAATaGTTCTTGCTGCCAACCTCC +
Preference number: 3 (lower is better)
Translates to: KTSLIAIDTVCRSMPLLNFIMFK*FLLPTS
Trigger: GGAGGTTGGCAGCAAGAACAATTTGAACATTATAAA...GTTTAGCAAAGGCATGGACCGGCAGACTGTGTCTATGGCAATTAATGAAGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
3UTR-3UTR CAA 90 bp TCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTAATACCTTTTACAATTTTAAGCTaGATTGCTGTCCACGGAGTT +
Preference number: 3 (lower is better)
Translates to: SASTSIRTPEVLCPHLIPFTILS*IAVHGV
Trigger: AACTCCGTGGACAGCAATCAAGCTTAAAATTGTAAA...AGGTATTAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR GCA 72 bp AATTTTAAGCTTGATTGCTGTCCACGGAGTTACTGTTaGTTCTCAATTATAACTAGTGTTAGAAGGCTTGAT +
Preference number: 3 (lower is better)
Translates to: NFKLDCCPRSYC*FSIITSVRRLD
Trigger: ATCAAGCCTTCTAACACTAGTTATAATTGAGAAGCAACAGTAACTCCGTGGACAGCAATCAAGCTTAAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp TCCGGAGTTCTTTCCGACGCTGGCGGGCTTCTTTGTGTGGTGGAGGGCTGCCCAGGCTTCTTTGTGTGGTaGAGGGCTGCCCAGCTTCAA +
Preference number: 4 (lower is better)
Translates to: SGVLSDAGGLLCVVEGCPGFFVW*RAAQLQ
Trigger: TTGAAGCTGGGCAGCCCTCCACCACACAAAGAAGCC...TGGGCAGCCCTCCACCACACAAAGAAGCCCGCCAGCGTCGGAAAGAACTCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR CCA 90 bp CATCCAGTCCACAGAGGTTCTGAGTACCCAGTGGCAGTGAGCCCCTCCAAACTCCAGGCAGTCCTTAGGTaGATGGCCAGGGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: HPVHRGSEYPVAVSPSKLQAVLR*MARGQA
Trigger: TGCCTGGCCCCTGGCCATCCACCTAAGGACTGCCTG...GAGTTTGGAGGGGCTCACTGCCACTGGGTACTCAGAACCTCTGTGGACTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR GCA 90 bp GGAGTTCTTTCCGACGCTGGCGGGCTTCTTTGTGTGGTGGAGGGCTGCCCAGCTTGCTGCACGAGATGCTaGTTCCTCCAGTTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: GVLSDAGGLLCVVEGCPACCTRC*FLQFLP
Trigger: CGGAAGAAACTGGAGGAAGCAGCATCTCGTGCAGCA...AGCTGGGCAGCCCTCCACCACACAAAGAAGCCCGCCAGCGTCGGAAAGAACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR CCA 90 bp TCCGGAGTTCTTTCCGACGCTGGCGGGCTTCTTTGTGTGGTGGAGGGCTGCCCAAGTTCTTTCCGACGCTaGCGGGCTTCTTTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SGVLSDAGGLLCVVEGCPSSFRR*RASLCG
Trigger: ACCACACAAAGAAGCCCGCCAGCGTCGGAAAGAACT...TGGGCAGCCCTCCACCACACAAAGAAGCCCGCCAGCGTCGGAAAGAACTCCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR GCA 90 bp GGAGTTCTTTCCGACGCTGGCGGGCTTCTTTGTGTGGTGGAGGGCTGCCCAGCTACTGTCTCTTCATCTTaGCGGGCCTGTCTCTCATCT +
Preference number: 4 (lower is better)
Translates to: GVLSDAGGLLCVVEGCPATVSSS*RACLSS
Trigger: AGATGAGAGACAGGCCCGGCAAGATGAAGAGACAGT...AGCTGGGCAGCCCTCCACCACACAAAGAAGCCCGCCAGCGTCGGAAAGAACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR TCA 90 bp AGGCAGTGTGAGGTCTCCAAGAACCCAGGGCTAGAGCAGCTAAGCCCCAGGTCAGCCAAAGGAAAGAGCTaGCATCCAGTCCACAGAGGT +
Preference number: 4 (lower is better)
Translates to: RQCEVSKNPGLEQLSPRSAKGKS*HPVHRG
Trigger: ACCTCTGTGGACTGGATGTCAGCTCTTTCCTTTGGC...TGACCTGGGGCTTAGCTGCTCTAGCCCTGGGTTCTTGGAGACCTCACACTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR GCA 90 bp TGCTTTCGTTGGCGGCCTGGAGTTCCTTCATTTGTCGCTCCAGTTCCTCTTGTTGCCTCCAGCTCCTGCTaGTTGCTTTCGTTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: CFRWRPGVPSFVAPVPLVASSSC*LLSLAA
Trigger: GGCCGCCAACGAAAGCAAGCAGCAGGAGCTGGAGGC...AACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAGGCCGCCAACGAAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR GCA 90 bp CATCCAGTCCACAGAGGTTCTGAGTACCCAGTGGCAGTGAGCCCCTCCAAACTCAGCCCCTCCAAACTCTaGAGAGCTGACTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: HPVHRGSEYPVAVSPSKLSPSKL*RADCAV
Trigger: GACAGCACAGTCAGCTCTGCAGAGTTTGGAGGGGCT...GAGTTTGGAGGGGCTCACTGCCACTGGGTACTCAGAACCTCTGTGGACTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp CTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTACGAGACCTTCAAGCTCCCCATaGCCGCGGCCCTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LTAWHILGSTSFTRESTRPSSSP*PRPCCP
Trigger: GGGGCAGCAGGGCCGCGGCCATGGGGAGCTTGAAGG...TCTCGTACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp CATCCAGTCCACAGAGGTTCTGAGTACCCAGTGGCAGTGAGCCCCTCCAAACTCCTTCCTCCAACAACCTaGCCTGAAGCTTCCGCACTG +
Preference number: 4 (lower is better)
Translates to: HPVHRGSEYPVAVSPSKLLPPTT*PEASAL
Trigger: CAGTGCGGAAGCTTCAGGCCAGGTTGTTGGAGGAAG...GAGTTTGGAGGGGCTCACTGCCACTGGGTACTCAGAACCTCTGTGGACTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR CAA 72 bp TCCAGTTTCTTCCGCACGGCCTCCAGCTCCTGCTGCTaGCTTTCGTTGGCGGCCTGGAGTTCCTTCATTTGT +
Preference number: 4 (lower is better)
Translates to: SSFFRTASSSCC*LSLAAWSSFIC
Trigger: ACAAATGAAGGAACTCCAGGCCGCCAACGAAAGCAAGCAGCAGGAGCTGGAGGCCGTGCGGAAGAAACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR TCA 90 bp TACTCGGAAAAGGAAACACGCTGCCAAAGGAAAGAGCTGACATCCAGTCCACAGTCCGCCTCGGTTGTCTaGATGGCCTGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: YSEKETRCQRKELTSSPQSASVV*MACCCS
Trigger: GGAGCAGCAGCAGGCCATTCAGACAACCGAGGCGGA...CTGTGGACTGGATGTCAGCTCTTTCCTTTGGCAGCGTGTTTCCTTTTCCGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp CCTGGAGTTCCTTCATTTGTCGCTCCAGTTCCTCTTGTTCAGCCAGCTGCTTCTCCAGCTCCTGCTGCTTaGTTTCGTTGGCGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PGVPSFVAPVPLVQPAASPAPAA*FRWRPG
Trigger: TCCAGGCCGCCAACGAAAGCAAGCAGCAGGAGCTGG...AGAAGCAGCTGGCTGAACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR GCA 90 bp TACTCGGAAAAGGAAACACGCTGCCAAAGGAAAGAGCTGACATCCAGTCCACAGGCCTCCAGCTCCTGCTaGTTGCTTTCGTTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: YSEKETRCQRKELTSSPQASSSC*LLSLAA
Trigger: GGCCGCCAACGAAAGCAAGCAGCAGGAGCTGGAGGC...CTGTGGACTGGATGTCAGCTCTTTCCTTTGGCAGCGTGTTTCCTTTTCCGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp TCCGGAGTTCTTTCCGACGCTGGCGGGCTTCTTTGTGTGGTGGAGGGCTGCCCATTTCTTTTCCTCTTCTaGTGCACGAGATGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SGVLSDAGGLLCVVEGCPFLFLF*CTRCCF
Trigger: GAAGCAGCATCTCGTGCAGCAGAAGAGGAAAAGAAA...TGGGCAGCCCTCCACCACACAAAGAAGCCCGCCAGCGTCGGAAAGAACTCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR CCA 90 bp ATGGCTGGGCAGAAATCCAACACCCAAATCAGCTGTCAAATTTCAAAGGCACATCCTTCAAGCTCCCCATaGCCGCGGCCCTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: MAGQKSNTQISCQISKAHPSSSP*PRPCCP
Trigger: GGGGCAGCAGGGCCGCGGCCATGGGGAGCTTGAAGG...ATGTGCCTTTGAAATTTGACAGCTGATTTGGGTGTTGGATTTCTGCCCAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR CCA 90 bp TGCTTTCGTTGGCGGCCTGGAGTTCCTTCATTTGTCGCTCCAGTTCCTCTTGTTGCGGGCTTCTTTGTGTaGTGGAGGGCTGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: CFRWRPGVPSFVAPVPLVAGFFV*WRAAQL
Trigger: AAGCTGGGCAGCCCTCCACCACACAAAGAAGCCCGC...AACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAGGCCGCCAACGAAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR CCA 90 bp CGTTGGCGGCCTGGAGTTCCTTCATTTGTCGCTCCAGTTCCTCTTGTTCAGCCAGCTGCTTGCTTTCGTTaGCGGCCTGGAGTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RWRPGVPSFVAPVPLVQPAACFR*RPGVPS
Trigger: TGAAGGAACTCCAGGCCGCCAACGAAAGCAAGCAGC...TGGCTGAACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAGGCCGCCAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR TCA 90 bp AGGCAGTGTGAGGTCTCCAAGAACCCAGGGCTAGAGCAGCTAAGCCCCAGGTCACAGTATCTACATAACTaGCGTGACTGCCAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: RQCEVSKNPGLEQLSPRSQYLHN*RDCQQA
Trigger: AGCTTGCTGGCAGTCACGTCAGTTATGTAGATACTG...TGACCTGGGGCTTAGCTGCTCTAGCCCTGGGTTCTTGGAGACCTCACACTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR GCA 90 bp TTCTTTCCGACGCTGGCGGGCTTCTTTGTGTGGTGGAGGGCTGCCCAGCTTCAATTCTGCTGCACGAGATaGTGCTTCCTCCAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: FFPTLAGFFVWWRAAQLQFCCTR*CFLQFL
Trigger: AAGAAACTGGAGGAAGCAGCATCTCGTGCAGCAGAA...TTGAAGCTGGGCAGCCCTCCACCACACAAAGAAGCCCGCCAGCGTCGGAAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR CCA 90 bp AAAGACTTCATTAATTGCCATAGACACAGTCTGCCGGTCCATGCCTTTGCTAAACCTTCAAGCTCCCCATaGCCGCGGCCCTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: KDFINCHRHSLPVHAFAKPSSSP*PRPCCP
Trigger: GGGGCAGCAGGGCCGCGGCCATGGGGAGCTTGAAGG...TTTAGCAAAGGCATGGACCGGCAGACTGTGTCTATGGCAATTAATGAAGTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS-3UTR CCA 90 bp GCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCGAACCGAGACCTTGCCGCTGTaGTCCTGGTCGAGTGCGGTG +
Preference number: 4 (lower is better)
Translates to: APMVKGIPCQVSGNGKRTETLPL*SWSSAV
Trigger: CACCGCACTCGACCAGGACCACAGCGGCAAGGTCTC...GGTTCGCTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR CAA 72 bp GGCCTGGAGTTCCTTCATTTGTCGCTCCAGTTCCTCTaGTTCAGCCAGCTGCTTCTTCCGGAGTTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: GLEFLHLSLQFL*FSQLLLPEFFP
Trigger: CGGAAAGAACTCCGGAAGAAGCAGCTGGCTGAACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
3UTR CAA 72 bp CTGCTTGCTTTCGTTGGCGGCCTGGAGTTCCTTCATTaGTCGCTCCAGTTCCTCTTGTTCAGCCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LLAFVGGLEFLH*SLQFLLFSQLL
Trigger: AAGCAGCTGGCTGAACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAGGCCGCCAACGAAAGCAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR TCA 90 bp CTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTACGAGACCTGGTCGAGTGCGGTaGAGGCGTGCCAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: LTAWHILGSTSFTRESTRPGRVR*RRARWL
Trigger: AAGCCATCTGGCACGCCTTCACCGCACTCGACCAGG...TCTCGTACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp GCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCGAACCGTGGTCCTGGTCGAGTaGGGTGAAGGCGTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: APMVKGIPCQVSGNGKRTVVLVE*GEGVPD
Trigger: ATCTGGCACGCCTTCACCGCACTCGACCAGGACCAC...GGTTCGCTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp GCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCGAACCGGGACTTGGAGACCTTaGCGCTGTGGTCCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: APMVKGIPCQVSGNGKRTGTWRP*RCGPGR
Trigger: TCGACCAGGACCACAGCGGCAAGGTCTCCAAGTCCC...GGTTCGCTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp CATCCAGTCCACAGAGGTTCTGAGTACCCAGTGGCAGTGAGCCCCTCCAAACTCTTCTGCTGCACGAGATaGTGCTTCCTCCAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: HPVHRGSEYPVAVSPSKLFCCTR*CFLQFL
Trigger: AAGAAACTGGAGGAAGCAGCATCTCGTGCAGCAGAA...GAGTTTGGAGGGGCTCACTGCCACTGGGTACTCAGAACCTCTGTGGACTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp TTCTTTCCGACGCTGGCGGGCTTCTTTGTGTGGTGGAGGGCTGCCCAGCTTCAATCTTCAAGAGCCTCCTaGAGCTTTAGGTACATGTCT +
Preference number: 4 (lower is better)
Translates to: FFPTLAGFFVWWRAAQLQSSRAS*SFRYMS
Trigger: AGACATGTACCTAAAGCTGCAGGAGGCTCTTGAAGA...TTGAAGCTGGGCAGCCCTCCACCACACAAAGAAGCCCGCCAGCGTCGGAAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR CCA 90 bp CTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTACGAGATTGCCGCTGTGGTCCTaGTCGAGTGCGGTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LTAWHILGSTSFTRESTRLPLWS*SSAVKA
Trigger: CGCCTTCACCGCACTCGACCAGGACCACAGCGGCAA...TCTCGTACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp GCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCGAACCCGTGCCAGATGGCTTTaGGCAGCTCCTCCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: APMVKGIPCQVSGNGKRTRARWL*AAPPSS
Trigger: GCTTGAAGGAGGAGCTGCTCAAAGCCATCTGGCACG...GGTTCGCTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp CAGCTAAGCCCCAGGTCATGTTATCAGCTACAGCTGTGGAATAAGCCAGGTTTAAGGGCAACTGGGTCATaGGGAACCTTCAGCACCGTG +
Preference number: 4 (lower is better)
Translates to: QLSPRSCYQLQLWNKPGLRATGS*GTFSTV
Trigger: CACGGTGCTGAAGGTTCCTCATGACCCAGTTGCCCT...TAAACCTGGCTTATTCCACAGCTGTAGCTGATAACATGACCTGGGGCTTAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR GCA 90 bp CTTTCGTTGGCGGCCTGGAGTTCCTTCATTTGTCGCTCCAGTTCCTCTTGTTCATGTGTGGTGGAGGGCTaGCCAGCTTCAACAGATGAA +
Preference number: 4 (lower is better)
Translates to: LSLAAWSSFICRSSSSCSCVVEG*PASTDE
Trigger: TTCATCTGTTGAAGCTGGGCAGCCCTCCACCACACA...TGAACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAGGCCGCCAACGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR GCA 90 bp CTTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAACCAGCTCCTGCTGCTTaGTTTCGTTGGCGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LLCQSTNGQRHSMSSVRKPAPAA*FRWRPG
Trigger: TCCAGGCCGCCAACGAAAGCAAGCAGCAGGAGCTGG...TTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp CTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTACGAGACCAGCTCCTGCTGCTTaGTTTCGTTGGCGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LTAWHILGSTSFTRESTRPAPAA*FRWRPG
Trigger: TCCAGGCCGCCAACGAAAGCAAGCAGCAGGAGCTGG...TCTCGTACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp TTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGCCTCCAGCTCCTGCTaGTTGCTTTCGTTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: FSVRAPMVKGIPCQVSGNASSSC*LLSLAA
Trigger: GGCCGCCAACGAAAGCAAGCAGCAGGAGCTGGAGGC...ATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp CTTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAAACGGCCTCCAGCTCCTaGTGCTTGCTTTCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: LLCQSTNGQRHSMSSVRKTASSS*CLLSLA
Trigger: CGCCAACGAAAGCAAGCAGCAGGAGCTGGAGGCCGT...TTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp AGGCAGTGTGAGGTCTCCAAGAACCCAGGGCTAGAGCAGCTAAGCCCCAGGTCAACCTGTTCTTCCATCTaGTGTCTGATAAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RQCEVSKNPGLEQLSPRSTCSSI*CLISFS
Trigger: AGAGAAGCTTATCAGACAGCAGATGGAAGAACAGGT...TGACCTGGGGCTTAGCTGCTCTAGCCCTGGGTTCTTGGAGACCTCACACTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR GCA 90 bp GTTCTTTCCGACGCTGGCGGGCTTCTTTGTGTGGTGGAGGGCTGCCCAGCTTCATCATGTAACCCTTTCTaGCTGACCTCTCAATATTCT +
Preference number: 4 (lower is better)
Translates to: VLSDAGGLLCVVEGCPASSCNPF*LTSQYS
Trigger: AGAATATTGAGAGGTCAGGCAGAAAGGGTTACATGA...TGAAGCTGGGCAGCCCTCCACCACACAAAGAAGCCCGCCAGCGTCGGAAAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR CCA 90 bp ATGGCTGGGCAGAAATCCAACACCCAAATCAGCTGTCAAATTTCAAAGGCACATTTGCCGCTGTGGTCCTaGTCGAGTGCGGTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: MAGQKSNTQISCQISKAHLPLWS*SSAVKA
Trigger: CGCCTTCACCGCACTCGACCAGGACCACAGCGGCAA...ATGTGCCTTTGAAATTTGACAGCTGATTTGGGTGTTGGATTTCTGCCCAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR CCA 90 bp CTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTACGAGAGCGGGCTTCTTTGTGTaGTGGAGGGCTGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LTAWHILGSTSFTRESTRAGFFV*WRAAQL
Trigger: AAGCTGGGCAGCCCTCCACCACACAAAGAAGCCCGC...TCTCGTACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp TACTCGGAAAAGGAAACACGCTGCCAAAGGAAAGAGCTGACATCCAGTCCACAGCCTCGGTTGTCTGAATaGCCTGCTGCTGCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: YSEKETRCQRKELTSSPQPRLSE*PAAAPS
Trigger: ACTTGGAGCAGCAGCAGGCCATTCAGACAACCGAGG...CTGTGGACTGGATGTCAGCTCTTTCCTTTGGCAGCGTGTTTCCTTTTCCGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp CTTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAAAGGGCAACTGGGTCATaGGGAACCTTCAGCACCGTG +
Preference number: 4 (lower is better)
Translates to: LLCQSTNGQRHSMSSVRKRATGS*GTFSTV
Trigger: CACGGTGCTGAAGGTTCCTCATGACCCAGTTGCCCT...TTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp TATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAAAAAGCAGATCCGCCTCGGTTGTCTaGATGGCCTGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: YFCWIFPPLSPQRKGKSRSASVV*MACCCS
Trigger: GGAGCAGCAGCAGGCCATTCAGACAACCGAGGCGGA...TCTGCTTTTTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp TACTCGGAAAAGGAAACACGCTGCCAAAGGAAAGAGCTGACATCCAGTCCACAGTCCTTCAGGACACGCTaGTTCTCCAACTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: YSEKETRCQRKELTSSPQSFRTR*FSNSCF
Trigger: GAAGCAGGAGTTGGAGAATCAGCGTGTCCTGAAGGA...CTGTGGACTGGATGTCAGCTCTTTCCTTTGGCAGCGTGTTTCCTTTTCCGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp GTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGAGTACCCAGTGGCAGTaGGCCCCTCCAAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: VRAPMVKGIPCQVSGNGKSTQWQ*APPNSA
Trigger: TGCAGAGTTTGGAGGGGCTCACTGCCACTGGGTACT...CTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp TGCTTTCGTTGGCGGCCTGGAGTTCCTTCATTTGTCGCTCCAGTTCCTCTTGTTGACCTCTCAATATTCTaGAGGAGGAACTCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: CFRWRPGVPSFVAPVPLVDLSIF*RRNSAP
Trigger: TGGGGCAGAGTTCCTCCTTCAGAATATTGAGAGGTC...AACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAGGCCGCCAACGAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR GCA 90 bp CTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTACGAGAAGTGCGGTGAAGGCGTaGCAGATGGCTTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LTAWHILGSTSFTRESTRSAVKA*QMALSS
Trigger: GCTGCTCAAAGCCATCTGGCACGCCTTCACCGCACT...TCTCGTACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp ATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTAGTGGTCCTGGTCGAGTaGGGTGAAGGCGTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: ILSQPGIYLVAHHSLERVVVLVE*GEGVPD
Trigger: ATCTGGCACGCCTTCACCGCACTCGACCAGGACCAC...TACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp TACTCGGAAAAGGAAACACGCTGCCAAAGGAAAGAGCTGACATCCAGTCCACAGTGTGTGGTGGAGGGCTaGCCAGCTTCAACAGATGAA +
Preference number: 4 (lower is better)
Translates to: YSEKETRCQRKELTSSPQCVVEG*PASTDE
Trigger: TTCATCTGTTGAAGCTGGGCAGCCCTCCACCACACA...CTGTGGACTGGATGTCAGCTCTTTCCTTTGGCAGCGTGTTTCCTTTTCCGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp GTTAGACGTATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAAACGGCCTCCAGCTCCTaGTGCTTGCTTTCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: VRRISVGYFLRCHHRGRETASSS*CLLSLA
Trigger: CGCCAACGAAAGCAAGCAGCAGGAGCTGGAGGCCGT...TTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATACGTCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp AAAGACTTCATTAATTGCCATAGACACAGTCTGCCGGTCCATGCCTTTGCTAAAGAGACCTTGCCGCTGTaGTCCTGGTCGAGTGCGGTG +
Preference number: 4 (lower is better)
Translates to: KDFINCHRHSLPVHAFAKETLPL*SWSSAV
Trigger: CACCGCACTCGACCAGGACCACAGCGGCAAGGTCTC...TTTAGCAAAGGCATGGACCGGCAGACTGTGTCTATGGCAATTAATGAAGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS-3UTR CCA 90 bp TACTCGGAAAAGGAAACACGCTGCCAAAGGAAAGAGCTGACATCCAGTCCACAGGCATGTAGCCCTGGTTaGACACTGGACCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: YSEKETRCQRKELTSSPQACSPG*TLDPHH
Trigger: ATGATGAGGGTCCAGTGTCCAACCAGGGCTACATGC...CTGTGGACTGGATGTCAGCTCTTTCCTTTGGCAGCGTGTTTCCTTTTCCGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp AGGCAGTGTGAGGTCTCCAAGAACCCAGGGCTAGAGCAGCTAAGCCCCAGGTCATATCAGCTACAGCTGTaGAATAAGCCAGGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: RQCEVSKNPGLEQLSPRSYQLQL*NKPGLK
Trigger: CTTTAAACCTGGCTTATTCCACAGCTGTAGCTGATA...TGACCTGGGGCTTAGCTGCTCTAGCCCTGGGTTCTTGGAGACCTCACACTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR TCA 90 bp GTTAGACGTATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAACGTGCCAGATGGCTTTaGGCAGCTCCTCCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: VRRISVGYFLRCHHRGRERARWL*AAPPSS
Trigger: GCTTGAAGGAGGAGCTGCTCAAAGCCATCTGGCACG...TTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATACGTCTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp TACTCGGAAAAGGAAACACGCTGCCAAAGGAAAGAGCTGACATCCAGTCCACAGCCTCATCATCATCCCTaGAGTGCTCTTCAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: YSEKETRCQRKELTSSPQPHHHP*SALQGQ
Trigger: TTGCCCTTGAAGAGCACTTCAGGGATGATGATGAGG...CTGTGGACTGGATGTCAGCTCTTTCCTTTGGCAGCGTGTTTCCTTTTCCGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp CTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTACGAGATCCAACAACCTGGCCTaGAGCTTCCGCACTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LTAWHILGSTSFTRESTRSNNLA*SFRTVS
Trigger: AGAGACAGTGCGGAAGCTTCAGGCCAGGTTGTTGGA...TCTCGTACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp CTTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAACAAGTTCTGCCTCAGTaGAAGCTGCAGGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LLCQSTNGQRHSMSSVRKQVLPQ*KLQVPS
Trigger: ACTGGGGACCTGCAGCTTTCACTGAGGCAGAACTTG...TTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp TCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTAATACCTGGGACTTGGAGACCTTaGCGCTGTGGTCCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: SASTSIRTPEVLCPHLIPGTWRP*RCGPGR
Trigger: TCGACCAGGACCACAGCGGCAAGGTCTCCAAGTCCC...AGGTATTAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp AGTTCATTAAAGACTTCATTAATTGCCATAGACACAGTCTGCCGGTCCATGCCTGGGACTTGGAGACCTTaGCGCTGTGGTCCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: SSLKTSLIAIDTVCRSMPGTWRP*RCGPGR
Trigger: TCGACCAGGACCACAGCGGCAAGGTCTCCAAGTCCC...AGGCATGGACCGGCAGACTGTGTCTATGGCAATTAATGAAGTCTTTAATGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS-3UTR GCA 90 bp GCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCGAACCGCCATAGACACAGTCTaGCGGTCCATGCCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: APMVKGIPCQVSGNGKRTAIDTV*RSMPLL
Trigger: TAGCAAAGGCATGGACCGGCAGACTGTGTCTATGGC...GGTTCGCTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp GCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCGAACCTGTGTGGTGGAGGGCTaGCCAGCTTCAACAGATGAA +
Preference number: 4 (lower is better)
Translates to: APMVKGIPCQVSGNGKRTCVVEG*PASTDE
Trigger: TTCATCTGTTGAAGCTGGGCAGCCCTCCACCACACA...GGTTCGCTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp GGCAAGGACTCTACACAGCAATTTTCATCCAAGAGAATGTCTCCTTTCTTATCCACGGCCTCCAGCTCCTaGTGCTTGCTTTCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: GKDSTQQFSSKRMSPFLSTASSS*CLLSLA
Trigger: CGCCAACGAAAGCAAGCAGCAGGAGCTGGAGGCCGT...GGATAAGAAAGGAGACATTCTCTTGGATGAAAATTGCTGTGTAGAGTCCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR GCA 90 bp CTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTACGAGACGTTCTAACTCAAGCTaGTCCAGCTGCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: LTAWHILGSTSFTRESTRRSNSS*SSCSMA
Trigger: GGCCATGGAGCAGCTGGAGCAGCTTGAGTTAGAACG...TCTCGTACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp ATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTAGCTGACTGTGCTGTCTaGACCCTGCCTCATTTGGGG +
Preference number: 4 (lower is better)
Translates to: ILSQPGIYLVAHHSLERVADCAV*TLPHLG
Trigger: CCCCAAATGAGGCAGGGTGCAGACAGCACAGTCAGC...TACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp TATAATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGGCGGGCTTCTTTGTGTaGTGGAGGGCTGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: YNPLTAWHILGSTSFTREAGFFV*WRAAQL
Trigger: AAGCTGGGCAGCCCTCCACCACACAAAGAAGCCCGC...CTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp GTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGGCTGCTTGCTTTCGTTaGCGGCCTGGAGTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VRAPMVKGIPCQVSGNGKAACFR*RPGVPS
Trigger: TGAAGGAACTCCAGGCCGCCAACGAAAGCAAGCAGC...CTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp TCTTTTCAGGTAACCCTTGTTTGCAGGAAGATAAATAAGAAGGCTTCCTTAGGACCTGGTCGAGTGCGGTaGAGGCGTGCCAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: SFQVTLVCRKINKKASLGPGRVR*RRARWL
Trigger: AAGCCATCTGGCACGCCTTCACCGCACTCGACCAGG...TCCTAAGGAAGCCTTCTTATTTATCTTCCTGCAAACAAGGGTTACCTGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp TGCTTTCGTTGGCGGCCTGGAGTTCCTTCATTTGTCGCTCCAGTTCCTCTTGTTAGTTCAGAGGACTTTTaGGCAACCTGTTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: CFRWRPGVPSFVAPVPLVSSEDF*ATCSSI
Trigger: GATGGAAGAACAGGTTGCTCAAAAGTCCTCTGAACT...AACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAGGCCGCCAACGAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR TCA 90 bp ATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTATCCAACAACCTGGCCTaGAGCTTCCGCACTGTCTCT +
Preference number: 4 (lower is better)
Translates to: ILSQPGIYLVAHHSLERVSNNLA*SFRTVS
Trigger: AGAGACAGTGCGGAAGCTTCAGGCCAGGTTGTTGGA...TACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp GTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGTCCTTCAGGACACGCTaGTTCTCCAACTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VRAPMVKGIPCQVSGNGKSFRTR*FSNSCF
Trigger: GAAGCAGGAGTTGGAGAATCAGCGTGTCCTGAAGGA...CTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp ATGCACTCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTACAAGTTCTGCCTCAGTaGAAGCTGCAGGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: MHSASTSIRTPEVLCPHLQVLPQ*KLQVPS
Trigger: ACTGGGGACCTGCAGCTTTCACTGAGGCAGAACTTG...TAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGAGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp GTTAGACGTATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAACAAACTCTGCAGAGCTaGCTGTGCTGTCTGCACCCT +
Preference number: 4 (lower is better)
Translates to: VRRISVGYFLRCHHRGREQTLQS*LCCLHP
Trigger: AGGGTGCAGACAGCACAGTCAGCTCTGCAGAGTTTG...TTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATACGTCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp ATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTACAAACTCTGCAGAGCTaGCTGTGCTGTCTGCACCCT +
Preference number: 4 (lower is better)
Translates to: ILSQPGIYLVAHHSLERVQTLQS*LCCLHP
Trigger: AGGGTGCAGACAGCACAGTCAGCTCTGCAGAGTTTG...TACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp TATAATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTACCCAGTGGCAGTaGGCCCCTCCAAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: YNPLTAWHILGSTSFTRESTQWQ*APPNSA
Trigger: TGCAGAGTTTGGAGGGGCTCACTGCCACTGGGTACT...CTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp TGCTTTCGTTGGCGGCCTGGAGTTCCTTCATTTGTCGCTCCAGTTCCTCTTGTTGTAACCCTTTCTGCCTaGCCTCTCAATATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: CFRWRPGVPSFVAPVPLVVTLSA*PLNILK
Trigger: CTTCAGAATATTGAGAGGTCAGGCAGAAAGGGTTAC...AACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAGGCCGCCAACGAAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR GCA 90 bp CTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTACGAGAGCCATAGACACAGTCTaGCGGTCCATGCCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: LTAWHILGSTSFTRESTRAIDTV*RSMPLL
Trigger: TAGCAAAGGCATGGACCGGCAGACTGTGTCTATGGC...TCTCGTACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp ATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTACGTTCTAACTCAAGCTaGTCCAGCTGCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: ILSQPGIYLVAHHSLERVRSNSS*SSCSMA
Trigger: GGCCATGGAGCAGCTGGAGCAGCTTGAGTTAGAACG...TACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp CAGCTAAGCCCCAGGTCATGTTATCAGCTACAGCTGTGGAATAAGCCAGGTTTATGCCTCAGTGAAAGCTaGAGGTCCCCAGTTAGTGAT +
Preference number: 4 (lower is better)
Translates to: QLSPRSCYQLQLWNKPGLCLSES*RSPVSD
Trigger: ATCACTAACTGGGGACCTGCAGCTTTCACTGAGGCA...TAAACCTGGCTTATTCCACAGCTGTAGCTGATAACATGACCTGGGGCTTAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR GCA 90 bp TACTCGGAAAAGGAAACACGCTGCCAAAGGAAAGAGCTGACATCCAGTCCACAGTCTCTCTTCAAGTTCTaGCTCAGTGAAAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: YSEKETRCQRKELTSSPQSLFKF*LSESCR
Trigger: CCTGCAGCTTTCACTGAGGCAGAACTTGAAGAGAGA...CTGTGGACTGGATGTCAGCTCTTTCCTTTGGCAGCGTGTTTCCTTTTCCGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp ATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTAAGCCCCTCCAAACTCTaGAGAGCTGACTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: ILSQPGIYLVAHHSLERVSPSKL*RADCAV
Trigger: GACAGCACAGTCAGCTCTGCAGAGTTTGGAGGGGCT...TACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp ATCTTAGTAGAAGCTAGAAAACCTCTACTAACAGGATCACATTCCAAAAGGGCAGAGACCTTGCCGCTGTaGTCCTGGTCGAGTGCGGTG +
Preference number: 4 (lower is better)
Translates to: ILVEARKPLLTGSHSKRAETLPL*SWSSAV
Trigger: CACCGCACTCGACCAGGACCACAGCGGCAAGGTCTC...TGCCCTTTTGGAATGTGATCCTGTTAGTAGAGGTTTTCTAGCTTCTACTAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp CTTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAAACCGTGCACAGGTTATaGGAAAGGACCTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLCQSTNGQRHSMSSVRKTVHRL*ERTLSW
Trigger: CCAGCTCAAGGTCCTTTCCCATAACCTGTGCACGGT...TTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp GCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCGAACCCTCTTCAAGGGCAACTaGGTCATGAGGAACCTTCAG +
Preference number: 4 (lower is better)
Translates to: APMVKGIPCQVSGNGKRTLFKGN*VMRNLQ
Trigger: CTGAAGGTTCCTCATGACCCAGTTGCCCTTGAAGAG...GGTTCGCTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp AGGCAGTGTGAGGTCTCCAAGAACCCAGGGCTAGAGCAGCTAAGCCCCAGGTCATTGTCAAAGTTGTCTTaGACCTTTTCCAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: RQCEVSKNPGLEQLSPRSLSKLS*TFSKMN
Trigger: GTTCATTTTGGAAAAGGTCCAAGACAACTTTGACAA...TGACCTGGGGCTTAGCTGCTCTAGCCCTGGGTTCTTGGAGACCTCACACTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR CCA 90 bp ATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTAGGCTTCTTTGTGTGGTaGAGGGCTGCCCAGCTTCAA +
Preference number: 4 (lower is better)
Translates to: ILSQPGIYLVAHHSLERVGFFVW*RAAQLQ
Trigger: TTGAAGCTGGGCAGCCCTCCACCACACAAAGAAGCC...TACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp GTTAGACGTATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAACTTCCTCCAACAACCTaGCCTGAAGCTTCCGCACTG +
Preference number: 4 (lower is better)
Translates to: VRRISVGYFLRCHHRGRELPPTT*PEASAL
Trigger: CAGTGCGGAAGCTTCAGGCCAGGTTGTTGGAGGAAG...TTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATACGTCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp ATGCACTCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTACCTCGGTTGTCTGAATaGCCTGCTGCTGCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: MHSASTSIRTPEVLCPHLPRLSE*PAAAPS
Trigger: ACTTGGAGCAGCAGCAGGCCATTCAGACAACCGAGG...TAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGAGTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp TTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATTATGGGAAAGGACCTTaGGCTGGGACTTGGAGACCT +
Preference number: 4 (lower is better)
Translates to: FSVRAPMVKGIPCQVSGNYGKGP*AGTWRP
Trigger: AGGTCTCCAAGTCCCAGCTCAAGGTCCTTTCCCATA...ATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp ATGCACTCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTATATGGGAAAGGACCTTaGGCTGGGACTTGGAGACCT +
Preference number: 4 (lower is better)
Translates to: MHSASTSIRTPEVLCPHLYGKGP*AGTWRP
Trigger: AGGTCTCCAAGTCCCAGCTCAAGGTCCTTTCCCATA...TAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGAGTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp GTTAGACGTATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAAATCAAGGTCCACATGTaGCCAGAAAGCAGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: VRRISVGYFLRCHHRGREIKVHM*PESRQS
Trigger: GGACTGCCTGCTTTCTGGTCACATGTGGACCTTGAT...TTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATACGTCTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR GCA 90 bp GTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGGAACCTTCAGCACCGTaGACAGGTTATGGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: VRAPMVKGIPCQVSGNGKEPSAP*TGYGKG
Trigger: TCCTTTCCCATAACCTGTGCACGGTGCTGAAGGTTC...CTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp GTTAGACGTATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAATGCTGCACGAGATGCTaGTTCCTCCAGTTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: VRRISVGYFLRCHHRGRECCTRC*FLQFLP
Trigger: CGGAAGAAACTGGAGGAAGCAGCATCTCGTGCAGCA...TTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATACGTCTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp TACTCGGAAAAGGAAACACGCTGCCAAAGGAAAGAGCTGACATCCAGTCCACAGTTTCTTTTCCTCTTCTaGTGCACGAGATGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: YSEKETRCQRKELTSSPQFLFLF*CTRCCF
Trigger: GAAGCAGCATCTCGTGCAGCAGAAGAGGAAAAGAAA...CTGTGGACTGGATGTCAGCTCTTTCCTTTGGCAGCGTGTTTCCTTTTCCGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp TACTCGGAAAAGGAAACACGCTGCCAAAGGAAAGAGCTGACATCCAGTCCACAGTCTTCAAGAGCCTCCTaGAGCTTTAGGTACATGTCT +
Preference number: 4 (lower is better)
Translates to: YSEKETRCQRKELTSSPQSSRAS*SFRYMS
Trigger: AGACATGTACCTAAAGCTGCAGGAGGCTCTTGAAGA...CTGTGGACTGGATGTCAGCTCTTTCCTTTGGCAGCGTGTTTCCTTTTCCGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp GTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGACTGTCTCTTCATCTTaGCGGGCCTGTCTCTCATCT +
Preference number: 4 (lower is better)
Translates to: VRAPMVKGIPCQVSGNGKTVSSS*RACLSS
Trigger: AGATGAGAGACAGGCCCGGCAAGATGAAGAGACAGT...CTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp CGTTGGCGGCCTGGAGTTCCTTCATTTGTCGCTCCAGTTCCTCTTGTTCAGCCACAGGTAACCCTTGTTTaGAGGAAGATAAATAAGAAG +
Preference number: 4 (lower is better)
Translates to: RWRPGVPSFVAPVPLVQPQVTLV*RKINKK
Trigger: CTTCTTATTTATCTTCCTGCAAACAAGGGTTACCTG...TGGCTGAACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAGGCCGCCAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR GCA 90 bp ATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTAGTGCTGTCTGCACCCTaGCTCATTTGGGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: ILSQPGIYLVAHHSLERVVLSAP*LIWGRI
Trigger: GATTCTTCCCCAAATGAGGCAGGGTGCAGACAGCAC...TACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp TTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATAGTTCTTTCCGACGCTaGCGGGCTTCTTTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: FSVRAPMVKGIPCQVSGNSSFRR*RASLCG
Trigger: ACCACACAAAGAAGCCCGCCAGCGTCGGAAAGAACT...ATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp TCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTAATACCTGCTGCTTGCTTTCGTTaGCGGCCTGGAGTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SASTSIRTPEVLCPHLIPAACFR*RPGVPS
Trigger: TGAAGGAACTCCAGGCCGCCAACGAAAGCAAGCAGC...AGGTATTAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp GCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCGAACCTCAAGTGTCAGGAAATaGAAAGCGAACCGGCCAATC +
Preference number: 4 (lower is better)
Translates to: APMVKGIPCQVSGNGKRTSSVRK*KANRPI
Trigger: GATTGGCCGGTTCGCTTTCCATTTCCTGACACTTGA...GGTTCGCTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp GCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCGAACCCGAATTAATCCTTCATaGTGGGCCACTTTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: APMVKGIPCQVSGNGKRTRINPS*WATLSF
Trigger: GAAGGACAAAGTGGCCCATCATGAAGGATTAATTCG...GGTTCGCTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp CTTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAACAGTTAGTGATCAGGTaGGGGTTCTTTGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: LLCQSTNGQRHSMSSVRKQLVIR*GFFEPG
Trigger: ACCAGGTTCAAAGAACCCTCACCTGATCACTAACTG...TTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp ATGGCTGGGCAGAAATCCAACACCCAAATCAGCTGTCAAATTTCAAAGGCACATATGGCAATGACTCCATaGCTTCTCTGTCAGAGCACC +
Preference number: 4 (lower is better)
Translates to: MAGQKSNTQISCQISKAHMAMTP*LLCQST
Trigger: GGTGCTCTGACAGAGAAGTCATGGAGTCATTGCCAT...ATGTGCCTTTGAAATTTGACAGCTGATTTGGGTGTTGGATTTCTGCCCAGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR TCA 90 bp CTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTACGAGACATGCAGAGACTATTTaGCTCCTAAGGCCACACTGT +
Preference number: 4 (lower is better)
Translates to: LTAWHILGSTSFTRESTRHAETI*LLRPHC
Trigger: ACAGTGTGGCCTTAGGAGTCAAATAGTCTCTGCATG...TCTCGTACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR GCA 90 bp TCTTTTCAGGTAACCCTTGTTTGCAGGAAGATAAATAAGAAGGCTTCCTTAGGAAGTGCGGTGAAGGCGTaGCAGATGGCTTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SFQVTLVCRKINKKASLGSAVKA*QMALSS
Trigger: GCTGCTCAAAGCCATCTGGCACGCCTTCACCGCACT...TCCTAAGGAAGCCTTCTTATTTATCTTCCTGCAAACAAGGGTTACCTGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp ATGCCTTTGCTAAACTGTCCATTTCCAATAAGCTCAATAAGTTCCCATGCAGAAAGTGCGGTGAAGGCGTaGCAGATGGCTTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: MPLLNCPFPISSISSHAESAVKA*QMALSS
Trigger: GCTGCTCAAAGCCATCTGGCACGCCTTCACCGCACT...TTCTGCATGGGAACTTATTGAGCTTATTGGAAATGGACAGTTTAGCAAAGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS-3UTR GCA 90 bp GCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCGAACCTCAAATTGTTCTTGCTaGCAACCTCCTCCCATAGCT +
Preference number: 4 (lower is better)
Translates to: APMVKGIPCQVSGNGKRTSNCSC*QPPPIA
Trigger: AGCTATGGGAGGAGGTTGGCAGCAAGAACAATTTGA...GGTTCGCTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp TATAATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGTGCTGCACGAGATGCTaGTTCCTCCAGTTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: YNPLTAWHILGSTSFTRECCTRC*FLQFLP
Trigger: CGGAAGAAACTGGAGGAAGCAGCATCTCGTGCAGCA...CTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp CTTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATTCTGCTGCACGAGATaGTGCTTCCTCCAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LLCQSTNGQRHSMSSVRKFCCTR*CFLQFL
Trigger: AAGAAACTGGAGGAAGCAGCATCTCGTGCAGCAGAA...TTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp TACTCGGAAAAGGAAACACGCTGCCAAAGGAAAGAGCTGACATCCAGTCCACAGACCTGTTCTTCCATCTaGTGTCTGATAAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: YSEKETRCQRKELTSSPQTCSSI*CLISFS
Trigger: AGAGAAGCTTATCAGACAGCAGATGGAAGAACAGGT...CTGTGGACTGGATGTCAGCTCTTTCCTTTGGCAGCGTGTTTCCTTTTCCGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp ATGCACTCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTAACTGTCTCTTCATCTTaGCGGGCCTGTCTCTCATCT +
Preference number: 4 (lower is better)
Translates to: MHSASTSIRTPEVLCPHLTVSSS*RACLSS
Trigger: AGATGAGAGACAGGCCCGGCAAGATGAAGAGACAGT...TAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGAGTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp GTTAGACGTATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAATGCTGCTGCTCCAAGTaGCACTTTTCTAGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: VRRISVGYFLRCHHRGRECCCSK*HFSSSA
Trigger: GGCTGAACTAGAAAAGTGGCACTTGGAGCAGCAGCA...TTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATACGTCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp ATGCACTCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTATGCTGCTGCTCCAAGTaGCACTTTTCTAGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: MHSASTSIRTPEVLCPHLCCCSK*HFSSSA
Trigger: GGCTGAACTAGAAAAGTGGCACTTGGAGCAGCAGCA...TAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGAGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp GTTAGACGTATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAATGCCTCAGTGAAAGCTaGAGGTCCCCAGTTAGTGAT +
Preference number: 4 (lower is better)
Translates to: VRRISVGYFLRCHHRGRECLSES*RSPVSD
Trigger: ATCACTAACTGGGGACCTGCAGCTTTCACTGAGGCA...TTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATACGTCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp ATGGCTGGGCAGAAATCCAACACCCAAATCAGCTGTCAAATTTCAAAGGCACATCTCTTCAAGGGCAACTaGGTCATGAGGAACCTTCAG +
Preference number: 4 (lower is better)
Translates to: MAGQKSNTQISCQISKAHLFKGN*VMRNLQ
Trigger: CTGAAGGTTCCTCATGACCCAGTTGCCCTTGAAGAG...ATGTGCCTTTGAAATTTGACAGCTGATTTGGGTGTTGGATTTCTGCCCAGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR CCA 90 bp TCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTAATACCTGCATGTAGCCCTGGTTaGACACTGGACCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: SASTSIRTPEVLCPHLIPACSPG*TLDPHH
Trigger: ATGATGAGGGTCCAGTGTCCAACCAGGGCTACATGC...AGGTATTAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp TCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTAATACCTAGTTCTTTCCGACGCTaGCGGGCTTCTTTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SASTSIRTPEVLCPHLIPSSFRR*RASLCG
Trigger: ACCACACAAAGAAGCCCGCCAGCGTCGGAAAGAACT...AGGTATTAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp TCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTAATACCTCTTTCGTTGGCGGCCTaGAGTTCCTTCATTTGTCGC +
Preference number: 4 (lower is better)
Translates to: SASTSIRTPEVLCPHLIPLSLAA*SSFICR
Trigger: GCGACAAATGAAGGAACTCCAGGCCGCCAACGAAAG...AGGTATTAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp CTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTACGAGACTAGTTCAGCCCTCTTaGAAGACTCTTCCTCCAACA +
Preference number: 4 (lower is better)
Translates to: LTAWHILGSTSFTRESTRLVQPS*KTLPPT
Trigger: TGTTGGAGGAAGAGTCTTCCAAGAGGGCTGAACTAG...TCTCGTACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp GCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCGAACCAATCCTCTCACAGCCTaGCATATACTTGGTAGCACA +
Preference number: 4 (lower is better)
Translates to: APMVKGIPCQVSGNGKRTNPLTA*HILGST
Trigger: TGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATT...GGTTCGCTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp GCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCGAACCTTACCTAAGTCTCGTTaGTCTAATACACCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: APMVKGIPCQVSGNGKRTLPKSR*SNTPAS
Trigger: GCTGGCAGGTGTATTAGACCAACGAGACTTAGGTAA...GGTTCGCTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR TCA 90 bp TTTCCAATAAGCTCAATAAGTTCCCATGCAGAAAGGCCATTTTTACTGTCATCAAGGGCAACTGGGTCATaGGGAACCTTCAGCACCGTG +
Preference number: 4 (lower is better)
Translates to: FPISSISSHAERPFLLSSRATGS*GTFSTV
Trigger: CACGGTGCTGAAGGTTCCTCATGACCCAGTTGCCCT...TGATGACAGTAAAAATGGCCTTTCTGCATGGGAACTTATTGAGCTTATTGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS-3UTR TCA 90 bp TATAATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGCCTCATCATCATCCCTaGAGTGCTCTTCAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: YNPLTAWHILGSTSFTREPHHHP*SALQGQ
Trigger: TTGCCCTTGAAGAGCACTTCAGGGATGATGATGAGG...CTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp ATGTTCAAATTGTTCTTGCTGCCAACCTCCTCCCATAGCTTCTGTAAGCTTCTTCCTCATCATCATCCCTaGAGTGCTCTTCAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: MFKLFLLPTSSHSFCKLLPHHHP*SALQGQ
Trigger: TTGCCCTTGAAGAGCACTTCAGGGATGATGATGAGG...AAGAAGCTTACAGAAGCTATGGGAGGAGGTTGGCAGCAAGAACAATTTGAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS-3UTR TCA 90 bp GTTAGACGTATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAACAGTTAGTGATCAGGTaGGGGTTCTTTGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: VRRISVGYFLRCHHRGREQLVIR*GFFEPG
Trigger: ACCAGGTTCAAAGAACCCTCACCTGATCACTAACTG...TTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATACGTCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp ATCTTAGTAGAAGCTAGAAAACCTCTACTAACAGGATCACATTCCAAAAGGGCATGGAGTACAACGGCATaGTCTCAGCTCGCTGCAACC +
Preference number: 4 (lower is better)
Translates to: ILVEARKPLLTGSHSKRAWSTTA*SQLAAT
Trigger: GGTTGCAGCGAGCTGAGATCATGCCGTTGTACTCCA...TGCCCTTTTGGAATGTGATCCTGTTAGTAGAGGTTTTCTAGCTTCTACTAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp TCTTTTCAGGTAACCCTTGTTTGCAGGAAGATAAATAAGAAGGCTTCCTTAGGAAGTCCACAGAGGTTCTaGGTACCCAGTGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: SFQVTLVCRKINKKASLGSPQRF*VPSGSE
Trigger: CTCACTGCCACTGGGTACTCAGAACCTCTGTGGACT...TCCTAAGGAAGCCTTCTTATTTATCTTCCTGCAAACAAGGGTTACCTGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp ATCTTAGTAGAAGCTAGAAAACCTCTACTAACAGGATCACATTCCAAAAGGGCAAGTCCACAGAGGTTCTaGGTACCCAGTGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: ILVEARKPLLTGSHSKRASPQRF*VPSGSE
Trigger: CTCACTGCCACTGGGTACTCAGAACCTCTGTGGACT...TGCCCTTTTGGAATGTGATCCTGTTAGTAGAGGTTTTCTAGCTTCTACTAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp TATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAAAAAGCAGAATGGCAATGACTCCATaGCTTCTCTGTCAGAGCACC +
Preference number: 4 (lower is better)
Translates to: YFCWIFPPLSPQRKGKSRMAMTP*LLCQST
Trigger: GGTGCTCTGACAGAGAAGTCATGGAGTCATTGCCAT...TCTGCTTTTTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp GTTAGACGTATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAAACCAGGAAATGGCAATaGCTCCATGACTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: VRRISVGYFLRCHHRGRETRKWQ*LHDFSV
Trigger: GACAGAGAAGTCATGGAGTCATTGCCATTTCCTGGT...TTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATACGTCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp GTTAGACGTATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAATCACATATTCCATCATaGTCCTCCCCACCATGCAGA +
Preference number: 4 (lower is better)
Translates to: VRRISVGYFLRCHHRGRESHIPS*SSPPCR
Trigger: TCTGCATGGTGGGGAGGATCATGATGGAATATGTGA...TTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATACGTCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR GCA 90 bp TATAATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGTCATCATCCCTGAAGTaGTCTTCAAGGGCAACTGGG +
Preference number: 4 (lower is better)
Translates to: YNPLTAWHILGSTSFTRESSSLK*SSRATG
Trigger: CCCAGTTGCCCTTGAAGAGCACTTCAGGGATGATGA...CTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp ATGTTCAAATTGTTCTTGCTGCCAACCTCCTCCCATAGCTTCTGTAAGCTTCTTTCATCATCCCTGAAGTaGTCTTCAAGGGCAACTGGG +
Preference number: 4 (lower is better)
Translates to: MFKLFLLPTSSHSFCKLLSSSLK*SSRATG
Trigger: CCCAGTTGCCCTTGAAGAGCACTTCAGGGATGATGA...AAGAAGCTTACAGAAGCTATGGGAGGAGGTTGGCAGCAAGAACAATTTGAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS-3UTR GCA 90 bp ATGCACTCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTATCTTGTTCAGCCAGCTaGTTCTTCCGGAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: MHSASTSIRTPEVLCPHLSCSAS*FFRSSF
Trigger: GAAAGAACTCCGGAAGAAGCAGCTGGCTGAACAAGA...TAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGAGTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp CTTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATACTGCTCAAGTGCTTaGTTCCGTTCTAACTCAAGC +
Preference number: 4 (lower is better)
Translates to: LLCQSTNGQRHSMSSVRKYCSSA*FRSNSS
Trigger: GCTTGAGTTAGAACGGAAGCAAGCACTTGAGCAGTA...TTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp GTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGTTAACTTCCTCGTACTaGTCAAGTGCTTGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: VRAPMVKGIPCQVSGNGKLTSSY*SSACFR
Trigger: ACGGAAGCAAGCACTTGAGCAGTACGAGGAAGTTAA...CTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp GCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCGAACCAAAGCTCTCCTGCCATaGAGTATCTACATAACTGAC +
Preference number: 4 (lower is better)
Translates to: APMVKGIPCQVSGNGKRTKALLP*SIYITD
Trigger: GTCAGTTATGTAGATACTGCATGGCAGGAGAGCTTT...GGTTCGCTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp ATGTTCAAATTGTTCTTGCTGCCAACCTCCTCCCATAGCTTCTGTAAGCTTCTTCTCTTCAAGGGCAACTaGGTCATGAGGAACCTTCAG +
Preference number: 4 (lower is better)
Translates to: MFKLFLLPTSSHSFCKLLLFKGN*VMRNLQ
Trigger: CTGAAGGTTCCTCATGACCCAGTTGCCCTTGAAGAG...AAGAAGCTTACAGAAGCTATGGGAGGAGGTTGGCAGCAAGAACAATTTGAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS-3UTR CCA 90 bp ATGGCTGGGCAGAAATCCAACACCCAAATCAGCTGTCAAATTTCAAAGGCACATCTAGTTCAGCCCTCTTaGAAGACTCTTCCTCCAACA +
Preference number: 4 (lower is better)
Translates to: MAGQKSNTQISCQISKAHLVQPS*KTLPPT
Trigger: TGTTGGAGGAAGAGTCTTCCAAGAGGGCTGAACTAG...ATGTGCCTTTGAAATTTGACAGCTGATTTGGGTGTTGGATTTCTGCCCAGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR CCA 90 bp TTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATCTGTCAGAGCACCAATaGTCAAAGGCATTCCATGTC +
Preference number: 4 (lower is better)
Translates to: FSVRAPMVKGIPCQVSGNLSEHQ*SKAFHV
Trigger: GACATGGAATGCCTTTGACCATTGGTGCTCTGACAG...ATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp GTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGATTAGGTTGACAATATaGGGCAAAGGGGTAGTCTCC +
Preference number: 4 (lower is better)
Translates to: VRAPMVKGIPCQVSGNGKIRLTI*GKGVVS
Trigger: GGAGACTACCCCTTTGCCCCATATTGTCAACCTAAT...CTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp TCTAATATAAGTTCATTAAAGACTTCATTAATTGCCATAGACACAGTCTGCCGGCGTGCCAGATGGCTTTaGGCAGCTCCTCCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: SNISSLKTSLIAIDTVCRRARWL*AAPPSS
Trigger: GCTTGAAGGAGGAGCTGCTCAAAGCCATCTGGCACG...CCGGCAGACTGTGTCTATGGCAATTAATGAAGTCTTTAATGAACTTATATTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS-3UTR TCA 90 bp GTTAGACGTATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAAAGTTCAGAGGACTTTTaGGCAACCTGTTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: VRRISVGYFLRCHHRGRESSEDF*ATCSSI
Trigger: GATGGAAGAACAGGTTGCTCAAAAGTCCTCTGAACT...TTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATACGTCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp TATAATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGCAGTATCTACATAACTaGCGTGACTGCCAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: YNPLTAWHILGSTSFTREQYLHN*RDCQQA
Trigger: AGCTTGCTGGCAGTCACGTCAGTTATGTAGATACTG...CTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATTATA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp ATCTTAGTAGAAGCTAGAAAACCTCTACTAACAGGATCACATTCCAAAAGGGCAGCCAAAGGAAAGAGCTaGCATCCAGTCCACAGAGGT +
Preference number: 4 (lower is better)
Translates to: ILVEARKPLLTGSHSKRAAKGKS*HPVHRG
Trigger: ACCTCTGTGGACTGGATGTCAGCTCTTTCCTTTGGC...TGCCCTTTTGGAATGTGATCCTGTTAGTAGAGGTTTTCTAGCTTCTACTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp TATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAAAAAGCAGAACCAGGAAATGGCAATaGCTCCATGACTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: YFCWIFPPLSPQRKGKSRTRKWQ*LHDFSV
Trigger: GACAGAGAAGTCATGGAGTCATTGCCATTTCCTGGT...TCTGCTTTTTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp ATGCACTCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTATTCCTCATTCTGGAATaGGGGATACTGGAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: MHSASTSIRTPEVLCPHLFLILE*GILESS
Trigger: AGAAGACTCCAGTATCCCTCATTCCAGAATGAGGAA...TAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGAGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR GCA 90 bp ATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTATCAAATTGTTCTTGCTaGCAACCTCCTCCCATAGCT +
Preference number: 4 (lower is better)
Translates to: ILSQPGIYLVAHHSLERVSNCSC*QPPPIA
Trigger: AGCTATGGGAGGAGGTTGGCAGCAAGAACAATTTGA...TACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp TATAATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGTCTTGTTCAGCCAGCTaGTTCTTCCGGAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: YNPLTAWHILGSTSFTRESCSAS*FFRSSF
Trigger: GAAAGAACTCCGGAAGAAGCAGCTGGCTGAACAAGA...CTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp GGCAAGGACTCTACACAGCAATTTTCATCCAAGAGAATGTCTCCTTTCTTATCCTCTTGTTCAGCCAGCTaGTTCTTCCGGAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: GKDSTQQFSSKRMSPFLSSCSAS*FFRSSF
Trigger: GAAAGAACTCCGGAAGAAGCAGCTGGCTGAACAAGA...GGATAAGAAAGGAGACATTCTCTTGGATGAAAATTGCTGTGTAGAGTCCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR GCA 90 bp ATGCACTCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTATACTGCTCAAGTGCTTaGTTCCGTTCTAACTCAAGC +
Preference number: 4 (lower is better)
Translates to: MHSASTSIRTPEVLCPHLYCSSA*FRSNSS
Trigger: GCTTGAGTTAGAACGGAAGCAAGCACTTGAGCAGTA...TAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGAGTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp ATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTATTAACTTCCTCGTACTaGTCAAGTGCTTGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: ILSQPGIYLVAHHSLERVLTSSY*SSACFR
Trigger: ACGGAAGCAAGCACTTGAGCAGTACGAGGAAGTTAA...TACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp TACTCGGAAAAGGAAACACGCTGCCAAAGGAAAGAGCTGACATCCAGTCCACAGCTTGGTCTTATTAGTTaGCATCTCCAGCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: YSEKETRCQRKELTSSPQLGLIS*HLQLLF
Trigger: AAAAAGAAGCTGGAGATGGCAACTAATAAGACCAAG...CTGTGGACTGGATGTCAGCTCTTTCCTTTGGCAGCGTGTTTCCTTTTCCGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp TATAATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGTCTCTCTTCAAGTTCTaGCTCAGTGAAAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: YNPLTAWHILGSTSFTRESLFKF*LSESCR
Trigger: CCTGCAGCTTTCACTGAGGCAGAACTTGAAGAGAGA...CTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp GTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGTCTTCTGGTGTAATGTaGAGTCAAACCACAGGAAAG +
Preference number: 4 (lower is better)
Translates to: VRAPMVKGIPCQVSGNGKSSGVM*SQTTGK
Trigger: CTTTCCTGTGGTTTGACTGCACATTACACCAGAAGA...CTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR CCA 90 bp TCTTTTCAGGTAACCCTTGTTTGCAGGAAGATAAATAAGAAGGCTTCCTTAGGAACCGTGCACAGGTTATaGGAAAGGACCTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SFQVTLVCRKINKKASLGTVHRL*ERTLSW
Trigger: CCAGCTCAAGGTCCTTTCCCATAACCTGTGCACGGT...TCCTAAGGAAGCCTTCTTATTTATCTTCCTGCAAACAAGGGTTACCTGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp GATTTTATAATGTTCAAATTGTTCTTGCTGCCAACCTCCTCCCATAGCTTCTGTGCATGTAGCCCTGGTTaGACACTGGACCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: DFIMFKLFLLPTSSHSFCACSPG*TLDPHH
Trigger: ATGATGAGGGTCCAGTGTCCAACCAGGGCTACATGC...ACAGAAGCTATGGGAGGAGGTTGGCAGCAAGAACAATTTGAACATTATAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS-3UTR CCA 90 bp TATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAAAAAGCAGATCAAGTGTCAGGAAATaGAAAGCGAACCGGCCAATC +
Preference number: 4 (lower is better)
Translates to: YFCWIFPPLSPQRKGKSRSSVRK*KANRPI
Trigger: GATTGGCCGGTTCGCTTTCCATTTCCTGACACTTGA...TCTGCTTTTTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp TTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATATTAGGTTGACAATATaGGGCAAAGGGGTAGTCTCC +
Preference number: 4 (lower is better)
Translates to: FSVRAPMVKGIPCQVSGNIRLTI*GKGVVS
Trigger: GGAGACTACCCCTTTGCCCCATATTGTCAACCTAAT...ATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp ATGCACTCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTAAATCCTCTCACAGCCTaGCATATACTTGGTAGCACA +
Preference number: 4 (lower is better)
Translates to: MHSASTSIRTPEVLCPHLNPLTA*HILGST
Trigger: TGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATT...TAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGAGTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
3UTR CAA 72 bp ACTATGATCCCAATTTCCCTGTTAGACGTATTTCTGTaGGATATTTCCTCCGTTGTCACCACAGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: TMIPISLLDVFL*DISSVVTTEEG
Trigger: CCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATACGTCTAACAGGGAAATTGGGATCATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR TCA 90 bp TATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAAAAAGCAGAAGTTCAGAGGACTTTTaGGCAACCTGTTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: YFCWIFPPLSPQRKGKSRSSEDF*ATCSSI
Trigger: GATGGAAGAACAGGTTGCTCAAAAGTCCTCTGAACT...TCTGCTTTTTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp ATGCCTTTGCTAAACTGTCCATTTCCAATAAGCTCAATAAGTTCCCATGCAGAAGAACCTTCAGCACCGTaGACAGGTTATGGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: MPLLNCPFPISSISSHAEEPSAP*TGYGKG
Trigger: TCCTTTCCCATAACCTGTGCACGGTGCTGAAGGTTC...TTCTGCATGGGAACTTATTGAGCTTATTGGAAATGGACAGTTTAGCAAAGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS-3UTR GCA 90 bp TCTTTTCAGGTAACCCTTGTTTGCAGGAAGATAAATAAGAAGGCTTCCTTAGGATCATCATCCCTGAAGTaGTCTTCAAGGGCAACTGGG +
Preference number: 4 (lower is better)
Translates to: SFQVTLVCRKINKKASLGSSSLK*SSRATG
Trigger: CCCAGTTGCCCTTGAAGAGCACTTCAGGGATGATGA...TCCTAAGGAAGCCTTCTTATTTATCTTCCTGCAAACAAGGGTTACCTGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp ATGGCTGGGCAGAAATCCAACACCCAAATCAGCTGTCAAATTTCAAAGGCACATTGTTCAAATTGTTCTTaGTGCCAACCTCCTCCCATA +
Preference number: 4 (lower is better)
Translates to: MAGQKSNTQISCQISKAHCSNCS*CQPPPI
Trigger: TATGGGAGGAGGTTGGCAGCAAGAACAATTTGAACA...ATGTGCCTTTGAAATTTGACAGCTGATTTGGGTGTTGGATTTCTGCCCAGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR GCA 90 bp ATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTATGTTCAAATTGTTCTTaGTGCCAACCTCCTCCCATA +
Preference number: 4 (lower is better)
Translates to: ILSQPGIYLVAHHSLERVCSNCS*CQPPPI
Trigger: TATGGGAGGAGGTTGGCAGCAAGAACAATTTGAACA...TACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp TTTCCAATAAGCTCAATAAGTTCCCATGCAGAAAGGCCATTTTTACTGTCATCAGCCATAGACACAGTCTaGCGGTCCATGCCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: FPISSISSHAERPFLLSSAIDTV*RSMPLL
Trigger: TAGCAAAGGCATGGACCGGCAGACTGTGTCTATGGC...TGATGACAGTAAAAATGGCCTTTCTGCATGGGAACTTATTGAGCTTATTGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS-3UTR CCA 90 bp TTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGATACTGGAGTCTTCTaGTGTAATGTGCAGTCAAAC +
Preference number: 4 (lower is better)
Translates to: FSVRAPMVKGIPCQVSGNDTGVF*CNVQSN
Trigger: GTTTGACTGCACATTACACCAGAAGACTCCAGTATC...ATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR CCA 90 bp AAAGACTTCATTAATTGCCATAGACACAGTCTGCCGGTCCATGCCTTTGCTAAATTGTCAAAGTTGTCTTaGACAGCACAGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: KDFINCHRHSLPVHAFAKLSKLS*TAQEAA
Trigger: TGCTGCTTCCTGTGCTGTCCAAGACAACTTTGACAA...TTTAGCAAAGGCATGGACCGGCAGACTGTGTCTATGGCAATTAATGAAGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS-3UTR TCA 90 bp TCTAATATAAGTTCATTAAAGACTTCATTAATTGCCATAGACACAGTCTGCCGGTATGGGAAAGGACCTTaGGCTGGGACTTGGAGACCT +
Preference number: 4 (lower is better)
Translates to: SNISSLKTSLIAIDTVCRYGKGP*AGTWRP
Trigger: AGGTCTCCAAGTCCCAGCTCAAGGTCCTTTCCCATA...CCGGCAGACTGTGTCTATGGCAATTAATGAAGTCTTTAATGAACTTATATTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS-3UTR GCA 90 bp GGCAAGGACTCTACACAGCAATTTTCATCCAAGAGAATGTCTCCTTTCTTATCCACCTGTTCTTCCATCTaGTGTCTGATAAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GKDSTQQFSSKRMSPFLSTCSSI*CLISFS
Trigger: AGAGAAGCTTATCAGACAGCAGATGGAAGAACAGGT...GGATAAGAAAGGAGACATTCTCTTGGATGAAAATTGCTGTGTAGAGTCCTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR GCA 90 bp CTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTACGAGACAGGTAACCCTTGTTTaGAGGAAGATAAATAAGAAG +
Preference number: 4 (lower is better)
Translates to: LTAWHILGSTSFTRESTRQVTLV*RKINKK
Trigger: CTTCTTATTTATCTTCCTGCAAACAAGGGTTACCTG...TCTCGTACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp ATGCACTCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTAATTGCTTTCTTAGTATaGACTCAGCAAGCACTAGCA +
Preference number: 4 (lower is better)
Translates to: MHSASTSIRTPEVLCPHLIAFLV*TQQALA
Trigger: TGCTAGTGCTTGCTGAGTGCATACTAAGAAAGCAAT...TAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGAGTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp GTTAGACGTATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAAATTGCTTTCTTAGTATaGACTCAGCAAGCACTAGCA +
Preference number: 4 (lower is better)
Translates to: VRRISVGYFLRCHHRGREIAFLV*TQQALA
Trigger: TGCTAGTGCTTGCTGAGTGCATACTAAGAAAGCAAT...TTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATACGTCTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp TTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGACATTCTGCAAAAGTaGAGGACCTATTTCACAACT +
Preference number: 4 (lower is better)
Translates to: FSVRAPMVKGIPCQVSGNDILQK*RTYFTT
Trigger: AGTTGTGAAATAGGTCCTGCACTTTTGCAGAATGTC...ATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR CCA 90 bp TCTAATATAAGTTCATTAAAGACTTCATTAATTGCCATAGACACAGTCTGCCGGACCGTGCACAGGTTATaGGAAAGGACCTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SNISSLKTSLIAIDTVCRTVHRL*ERTLSW
Trigger: CCAGCTCAAGGTCCTTTCCCATAACCTGTGCACGGT...CCGGCAGACTGTGTCTATGGCAATTAATGAAGTCTTTAATGAACTTATATTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS-3UTR CCA 90 bp ATCTTAGTAGAAGCTAGAAAACCTCTACTAACAGGATCACATTCCAAAAGGGCACTGTCAGAGCACCAATaGTCAAAGGCATTCCATGTC +
Preference number: 4 (lower is better)
Translates to: ILVEARKPLLTGSHSKRALSEHQ*SKAFHV
Trigger: GACATGGAATGCCTTTGACCATTGGTGCTCTGACAG...TGCCCTTTTGGAATGTGATCCTGTTAGTAGAGGTTTTCTAGCTTCTACTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CCA 90 bp TATAATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGATACTGATAAATGGCTaGGCAGAAATCCAACACCCA +
Preference number: 4 (lower is better)
Translates to: YNPLTAWHILGSTSFTREILING*AEIQHP
Trigger: TGGGTGTTGGATTTCTGCCCAGCCATTTATCAGTAT...CTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR CCA 90 bp CTTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAAGATAATACTGATAAATaGCTGGGCAGAAATCCAACA +
Preference number: 4 (lower is better)
Translates to: LLCQSTNGQRHSMSSVRKDNTDK*LGRNPT
Trigger: TGTTGGATTTCTGCCCAGCCATTTATCAGTATTATC...TTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR CCA 90 bp ATGCACTCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTAACTTTTTCCTCATTCTaGAATGAGGGATACTGGAGT +
Preference number: 4 (lower is better)
Translates to: MHSASTSIRTPEVLCPHLTFSSF*NEGYWS
Trigger: ACTCCAGTATCCCTCATTCCAGAATGAGGAAAAAGT...TAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGAGTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR GCA 90 bp TCTTTTCAGGTAACCCTTGTTTGCAGGAAGATAAATAAGAAGGCTTCCTTAGGATTTCTTTTCCTCTTCTaGTGCACGAGATGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SFQVTLVCRKINKKASLGFLFLF*CTRCCF
Trigger: GAAGCAGCATCTCGTGCAGCAGAAGAGGAAAAGAAA...TCCTAAGGAAGCCTTCTTATTTATCTTCCTGCAAACAAGGGTTACCTGAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318950.11
ENST00000447399.6
ENST00000534562.1
CDS-3UTR GCA 90 bp TCTTTTCAGGTAACCCTTGTTTGCAGGAAGATAAATAAGAAGGCTTCCTTAGGATCTTCAAGAGCCTCCTaGAGCTTTAGGTACATGTCT +
Preference number: 4 (lower is better)
Translates to: SFQVTLVCRKINKKASLGSSRAS*SFRYMS
Trigger: AGACATGTACCTAAAGCTGCAGGAGGCTCTTGAAGA...TCCTAAGGAAGCCTTCTTATTTATCTTCCTGCAAACAAGGGTTACCTGAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318950.11
ENST00000447399.6
ENST00000534562.1
CDS-3UTR GCA 90 bp GTTAGACGTATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAACTTGGTCTTATTAGTTaGCATCTCCAGCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: VRRISVGYFLRCHHRGRELGLIS*HLQLLF
Trigger: AAAAAGAAGCTGGAGATGGCAACTAATAAGACCAAG...TTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATACGTCTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp ATGCACTCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTACCACGGAGTTACTGTTaGTTCTCAATTATAACTAGT +
Preference number: 4 (lower is better)
Translates to: MHSASTSIRTPEVLCPHLPRSYC*FSIITS
Trigger: ACTAGTTATAATTGAGAAGCAACAGTAACTCCGTGG...TAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGAGTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp TTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATAATTTTAAGCTTGATTaGTGTCCACGGAGTTACTGT +
Preference number: 4 (lower is better)
Translates to: FSVRAPMVKGIPCQVSGNNFKLD*CPRSYC
Trigger: ACAGTAACTCCGTGGACAGCAATCAAGCTTAAAATT...ATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp GTTAGACGTATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAAAATTTTAAGCTTGATTaGTGTCCACGGAGTTACTGT +
Preference number: 4 (lower is better)
Translates to: VRRISVGYFLRCHHRGRENFKLD*CPRSYC
Trigger: ACAGTAACTCCGTGGACAGCAATCAAGCTTAAAATT...TTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATACGTCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp TCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTAATACCTCCACGGAGTTACTGTTaGTTCTCAATTATAACTAGT +
Preference number: 4 (lower is better)
Translates to: SASTSIRTPEVLCPHLIPPRSYC*FSIITS
Trigger: ACTAGTTATAATTGAGAAGCAACAGTAACTCCGTGG...AGGTATTAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR GCA 90 bp TCTAATATAAGTTCATTAAAGACTTCATTAATTGCCATAGACACAGTCTGCCGGTCAAATTGTTCTTGCTaGCAACCTCCTCCCATAGCT +
Preference number: 4 (lower is better)
Translates to: SNISSLKTSLIAIDTVCRSNCSC*QPPPIA
Trigger: AGCTATGGGAGGAGGTTGGCAGCAAGAACAATTTGA...CCGGCAGACTGTGTCTATGGCAATTAATGAAGTCTTTAATGAACTTATATTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS-3UTR GCA 90 bp TTTCCAATAAGCTCAATAAGTTCCCATGCAGAAAGGCCATTTTTACTGTCATCATGTTCAAATTGTTCTTaGTGCCAACCTCCTCCCATA +
Preference number: 4 (lower is better)
Translates to: FPISSISSHAERPFLLSSCSNCS*CQPPPI
Trigger: TATGGGAGGAGGTTGGCAGCAAGAACAATTTGAACA...TGATGACAGTAAAAATGGCCTTTCTGCATGGGAACTTATTGAGCTTATTGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526358.5
3UTR CAA 72 bp GTATCTATCTTAGCCAAAGCACTGTTTAAAAGGATATaGCCTCCTAGACATAGTGCCACTGAAAACCAAGAT +
Preference number: 4 (lower is better)
Translates to: VSILAKALFKRI*PPRHSATENQD
Trigger: ATCTTGGTTTTCAGTGGCACTATGTCTAGGAGGCAATATCCTTTTAAACAGTGCTTTGGCTAAGATAGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS GCA 90 bp TTGGAGACCTTGCCGCTGTGGTCCTGGTCGAGTGCGGTGAAGGCGTaGCAGATGGCTTTGAGCAGCTCCTCCTTCAAGCTCCCCATGGCC +
Preference number: 5 (lower is better)
Translates to: LETLPLWSWSSAVKA*QMALSSSSFKLPMA
Trigger: GGCCATGGGGAGCTTGAAGGAGGAGCTGCTCAAAGCCATCTGGCACGCCTTCACCGCACTCGACCAGGACCACAGCGGCAAGGTCTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318950.11
ENST00000447399.6
ENST00000524817.5
ENST00000526358.5
ENST00000531814.5
CDS CCA 90 bp CCTGACGGCAACGTTGGCCTGAACAGGCCTCTGCCTGCATACCAATaGCCCTCTCTGGTCTGGAGCGTGTTGAAGATGCCAAGCTCTTAT +
Preference number: 5 (lower is better)
Translates to: PDGNVGLNRPLPAYQ*PSLVWSVLKMPSSY
Trigger: ATAAGAGCTTGGCATCTTCAACACGCTCCAGACCAGAGAGGGCCATTGGTATGCAGGCAGAGGCCTGTTCAGGCCAACGTTGCCGTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524817.5
CDS-3UTR CAA 90 bp TGCTTTCGTTGGCGGCCTGGAGTTCCTTCATTTGTCGCTCCAGTTCCTCTTGTTTCCAGCTCCTGCTGCTaGCTTTCGTTGGCGGCCTGG +
Preference number: 5 (lower is better)
Translates to: CFRWRPGVPSFVAPVPLVSSSCC*LSLAAW
Trigger: CCAGGCCGCCAACGAAAGCAAGCAGCAGGAGCTGGA...AACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAGGCCGCCAACGAAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS CCA 90 bp TGGCCTGCTGCTGCTCCAAGTGCCACTTTTCTAGTTCAGCCCTCTTaGAAGACTCTTCCTCCAACAACCTGGCCTGAAGCTTCCGCACTG +
Preference number: 5 (lower is better)
Translates to: WPAAAPSATFLVQPS*KTLPPTTWPEASAL
Trigger: CAGTGCGGAAGCTTCAGGCCAGGTTGTTGGAGGAAGAGTCTTCCAAGAGGGCTGAACTAGAAAAGTGGCACTTGGAGCAGCAGCAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS CCA 90 bp CACGCTGATTCTCCAACTCCTGCTTCTCCGCCTCGGTTGTCTGAATaGCCTGCTGCTGCTCCAAGTGCCACTTTTCTAGTTCAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: HADSPTPASPPRLSE*PAAAPSATFLVQPS
Trigger: AGAGGGCTGAACTAGAAAAGTGGCACTTGGAGCAGCAGCAGGCCATTCAGACAACCGAGGCGGAGAAGCAGGAGTTGGAGAATCAGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp TGCTTTCGTTGGCGGCCTGGAGTTCCTTCATTTGTCGCTCCAGTTCCTCTTGTTCACTGTCTCTTCATCTaGCCGGGCCTGTCTCTCATC +
Preference number: 5 (lower is better)
Translates to: CFRWRPGVPSFVAPVPLVHCLFI*PGLSLI
Trigger: GATGAGAGACAGGCCCGGCAAGATGAAGAGACAGTG...AACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAGGCCGCCAACGAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR CAA 90 bp CATCCAGTCCACAGAGGTTCTGAGTACCCAGTGGCAGTGAGCCCCTCCAAACTCTCAGGTGAGGGTTCTTaGAACCTGGTTCTATCAGTC +
Preference number: 5 (lower is better)
Translates to: HPVHRGSEYPVAVSPSKLSGEGS*NLVLSV
Trigger: GACTGATAGAACCAGGTTCAAAGAACCCTCACCTGA...GAGTTTGGAGGGGCTCACTGCCACTGGGTACTCAGAACCTCTGTGGACTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS TCA 90 bp GGCCTCTGCCTGCATACCAATGGCCCTCTCTGGTCTGGAGCGTGTTaGAGATGCCAAGCTCTTATCAGAGGTAATTCTGGGTTTGTGGAT +
Preference number: 5 (lower is better)
Translates to: GLCLHTNGPLWSGAC*RCQALIRGNSGFVD
Trigger: ATCCACAAACCCAGAATTACCTCTGATAAGAGCTTGGCATCTTCAACACGCTCCAGACCAGAGAGGGCCATTGGTATGCAGGCAGAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524817.5
CDS CCA 90 bp CAGGCAAAGTACATAAAGGCAAAGTCTGCAAACAAATCTGGCACCTaGCCTGAAGCTTCCGCACTGTCTCTTCATCTTGCCGGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: QAKYIKAKSANKSGT*PEASALSLHLAGPV
Trigger: GACAGGCCCGGCAAGATGAAGAGACAGTGCGGAAGCTTCAGGCCAGGTGCCAGATTTGTTTGCAGACTTTGCCTTTATGTACTTTGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524817.5
CDS-3UTR CAA 90 bp ATGGCTGGGCAGAAATCCAACACCCAAATCAGCTGTCAAATTTCAAAGGCACATTCCAGCTCCTGCTGCTaGCTTTCGTTGGCGGCCTGG +
Preference number: 5 (lower is better)
Translates to: MAGQKSNTQISCQISKAHSSSCC*LSLAAW
Trigger: CCAGGCCGCCAACGAAAGCAAGCAGCAGGAGCTGGA...ATGTGCCTTTGAAATTTGACAGCTGATTTGGGTGTTGGATTTCTGCCCAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR CAA 90 bp ATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTATCCAGCTCCTGCTGCTaGCTTTCGTTGGCGGCCTGG +
Preference number: 5 (lower is better)
Translates to: ILSQPGIYLVAHHSLERVSSSCC*LSLAAW
Trigger: CCAGGCCGCCAACGAAAGCAAGCAGCAGGAGCTGGA...TACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp CATCCAGTCCACAGAGGTTCTGAGTACCCAGTGGCAGTGAGCCCCTCCAAACTCCAGTTCAGAGGACTTTaGAGCAACCTGTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: HPVHRGSEYPVAVSPSKLQFRGL*SNLFFH
Trigger: ATGGAAGAACAGGTTGCTCAAAAGTCCTCTGAACTG...GAGTTTGGAGGGGCTCACTGCCACTGGGTACTCAGAACCTCTGTGGACTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp CTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTACGAGAGCTTCTCCGCCTCGGTaGTCTGAATGGCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LTAWHILGSTSFTRESTRASPPR*SEWPAA
Trigger: AGCAGCAGGCCATTCAGACAACCGAGGCGGAGAAGC...TCTCGTACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS TCA 90 bp GCACTGGAGGGGAGTTCCAAGAACCTGATTAACCTCACAGTGCAGTaGATGTGCACCTGTGGGGCCTATATATGCCTGGCAATATGCTAC +
Preference number: 5 (lower is better)
Translates to: ALEGSSKNLINLTVQ*MCTCGAYICLAICY
Trigger: GTAGCATATTGCCAGGCATATATAGGCCCCACAGGTGCACATTCACTGCACTGTGAGGTTAATCAGGTTCTTGGAACTCCCCTCCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524817.5
CDS-3UTR CAA 90 bp TATAATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGTGGGACTTGGAGACCTaGCCGCTGTGGTCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: YNPLTAWHILGSTSFTREWDLET*PLWSWS
Trigger: CGACCAGGACCACAGCGGCAAGGTCTCCAAGTCCCA...CTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp CTTTCGTTGGCGGCCTGGAGTTCCTTCATTTGTCGCTCCAGTTCCTCTTGTTCACTGGAGTTCCTTCATTaGTCGCTCCAGTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: LSLAAWSSFICRSSSSCSLEFLH*SLQFLL
Trigger: CAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAG...TGAACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAGGCCGCCAACGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR CAA 90 bp CGTTGGCGGCCTGGAGTTCCTTCATTTGTCGCTCCAGTTCCTCTTGTTCAGCCACAGTTCAGAGGACTTTaGAGCAACCTGTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: RWRPGVPSFVAPVPLVQPQFRGL*SNLFFH
Trigger: ATGGAAGAACAGGTTGCTCAAAAGTCCTCTGAACTG...TGGCTGAACAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAGGCCGCCAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR CAA 90 bp ATGCACTCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTAGCTTCTCCGCCTCGGTaGTCTGAATGGCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: MHSASTSIRTPEVLCPHLASPPR*SEWPAA
Trigger: AGCAGCAGGCCATTCAGACAACCGAGGCGGAGAAGC...TAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGAGTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS TCA 90 bp AAAGTACATAAAGGCAAAGTCTGCAAACAAATCTGGCACCTGGCCTaGAGCTTCCGCACTGTCTCTTCATCTTGCCGGGCCTGTCTCTCA +
Preference number: 5 (lower is better)
Translates to: KVHKGKVCKQIWHLA*SFRTVSSSCRACLS
Trigger: TGAGAGACAGGCCCGGCAAGATGAAGAGACAGTGCGGAAGCTTCAGGCCAGGTGCCAGATTTGTTTGCAGACTTTGCCTTTATGTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524817.5
CDS-3UTR CAA 90 bp ATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTATGCTGCTTGCTTTCGTaGGCGGCCTGGAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: ILSQPGIYLVAHHSLERVCCLLS*AAWSSF
Trigger: GAAGGAACTCCAGGCCGCCAACGAAAGCAAGCAGCA...TACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp GTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCACTGTCTCTTCATCTaGCCGGGCCTGTCTCTCATC +
Preference number: 5 (lower is better)
Translates to: VRAPMVKGIPCQVSGNGKHCLFI*PGLSLI
Trigger: GATGAGAGACAGGCCCGGCAAGATGAAGAGACAGTG...CTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp TACTCGGAAAAGGAAACACGCTGCCAAAGGAAAGAGCTGACATCCAGTCCACAGTGGATATTTCCTCCGTaGTCACCACAGAGGAAGGGA +
Preference number: 5 (lower is better)
Translates to: YSEKETRCQRKELTSSPQWIFPP*SPQRKG
Trigger: TCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCA...CTGTGGACTGGATGTCAGCTCTTTCCTTTGGCAGCGTGTTTCCTTTTCCGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp CATCCAGTCCACAGAGGTTCTGAGTACCCAGTGGCAGTGAGCCCCTCCAAACTCTTAGACGTATTTCTGTaGGATATTTCCTCCGTTGTC +
Preference number: 5 (lower is better)
Translates to: HPVHRGSEYPVAVSPSKLLDVFL*DISSVV
Trigger: GACAACGGAGGAAATATCCAACAGAAATACGTCTAA...GAGTTTGGAGGGGCTCACTGCCACTGGGTACTCAGAACCTCTGTGGACTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS TCA 90 bp AACTCAGCTCTAGAAGTAGCTTGCCAGGTTCATCCTGAACCTTTCTaGAGGTGCCCTCCCAAGCCTTATGAAGTTGTCATTAGCACCCAG +
Preference number: 5 (lower is better)
Translates to: NSALEVACQVHPEPF*RCPPKPYEVVISTQ
Trigger: CTGGGTGCTAATGACAACTTCATAAGGCTTGGGAGGGCACCTTCAGAAAGGTTCAGGATGAACCTGGCAAGCTACTTCTAGAGCTGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534662.1
CDS GCA 90 bp CGTGGTCTTTTTCTCTTTCCAGTTCTTCTCTCTCTCTTCAAGTTCTaGCTCAGTGAAAGCTGCAGGTCCCCAGTTAGTGATCAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: RGLFLFPVLLSLFKF*LSESCRSPVSDQVR
Trigger: CCTCACCTGATCACTAACTGGGGACCTGCAGCTTTCACTGAGGCAGAACTTGAAGAGAGAGAGAAGAACTGGAAAGAGAAAAAGACCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp ATCTTAGTAGAAGCTAGAAAACCTCTACTAACAGGATCACATTCCAAAAGGGCATGGGACTTGGAGACCTaGCCGCTGTGGTCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: ILVEARKPLLTGSHSKRAWDLET*PLWSWS
Trigger: CGACCAGGACCACAGCGGCAAGGTCTCCAAGTCCCA...TGCCCTTTTGGAATGTGATCCTGTTAGTAGAGGTTTTCTAGCTTCTACTAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp GTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGTTATGGGAAAGGACCTaGAGCTGGGACTTGGAGACC +
Preference number: 5 (lower is better)
Translates to: VRAPMVKGIPCQVSGNGKLWERT*SWDLET
Trigger: GGTCTCCAAGTCCCAGCTCAAGGTCCTTTCCCATAA...CTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp GCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCGAACCTGCCGGTCCATGCCTTaGCTAAACTGTCCATTTCCA +
Preference number: 5 (lower is better)
Translates to: APMVKGIPCQVSGNGKRTCRSMP*LNCPFP
Trigger: TGGAAATGGACAGTTTAGCAAAGGCATGGACCGGCA...GGTTCGCTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp GGCAAGGACTCTACACAGCAATTTTCATCCAAGAGAATGTCTCCTTTCTTATCCTGCTGCTTGCTTTCGTaGGCGGCCTGGAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: GKDSTQQFSSKRMSPFLSCCLLS*AAWSSF
Trigger: GAAGGAACTCCAGGCCGCCAACGAAAGCAAGCAGCA...GGATAAGAAAGGAGACATTCTCTTGGATGAAAATTGCTGTGTAGAGTCCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR CAA 90 bp GCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCGAACCTCTAGTTCAGCCCTCTaGGAAGACTCTTCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: APMVKGIPCQVSGNGKRTSSSAL*EDSSSN
Trigger: GTTGGAGGAAGAGTCTTCCAAGAGGGCTGAACTAGA...GGTTCGCTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp ATGCACTCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTATTATGGGAAAGGACCTaGAGCTGGGACTTGGAGACC +
Preference number: 5 (lower is better)
Translates to: MHSASTSIRTPEVLCPHLLWERT*SWDLET
Trigger: GGTCTCCAAGTCCCAGCTCAAGGTCCTTTCCCATAA...TAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGAGTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp CTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTACGAGATGCCGGTCCATGCCTTaGCTAAACTGTCCATTTCCA +
Preference number: 5 (lower is better)
Translates to: LTAWHILGSTSFTRESTRCRSMP*LNCPFP
Trigger: TGGAAATGGACAGTTTAGCAAAGGCATGGACCGGCA...TCTCGTACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS CCA 90 bp AGGGTCCAACACATCCTATTGAATTCAATCTTGTCAAAGTTGTCTTaGACAGCACAGGAAGCAGCATGTCTGAAGGCTCTGAGGCAGGAA +
Preference number: 5 (lower is better)
Translates to: RVQHILLNSILSKLS*TAQEAACLKALRQE
Trigger: TTCCTGCCTCAGAGCCTTCAGACATGCTGCTTCCTGTGCTGTCCAAGACAACTTTGACAAGATTGAATTCAATAGGATGTGTTGGACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS-3UTR CAA 90 bp TCTAATATAAGTTCATTAAAGACTTCATTAATTGCCATAGACACAGTCTGCCGGTGGGACTTGGAGACCTaGCCGCTGTGGTCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: SNISSLKTSLIAIDTVCRWDLET*PLWSWS
Trigger: CGACCAGGACCACAGCGGCAAGGTCTCCAAGTCCCA...CCGGCAGACTGTGTCTATGGCAATTAATGAAGTCTTTAATGAACTTATATTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS-3UTR CAA 90 bp ATCTTAGTAGAAGCTAGAAAACCTCTACTAACAGGATCACATTCCAAAAGGGCATGCTGCTTGCTTTCGTaGGCGGCCTGGAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: ILVEARKPLLTGSHSKRACCLLS*AAWSSF
Trigger: GAAGGAACTCCAGGCCGCCAACGAAAGCAAGCAGCA...TGCCCTTTTGGAATGTGATCCTGTTAGTAGAGGTTTTCTAGCTTCTACTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp ATGGCTGGGCAGAAATCCAACACCCAAATCAGCTGTCAAATTTCAAAGGCACATTCTAGTTCAGCCCTCTaGGAAGACTCTTCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: MAGQKSNTQISCQISKAHSSSAL*EDSSSN
Trigger: GTTGGAGGAAGAGTCTTCCAAGAGGGCTGAACTAGA...ATGTGCCTTTGAAATTTGACAGCTGATTTGGGTGTTGGATTTCTGCCCAGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR CAA 90 bp TTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATTGGATATTTCCTCCGTaGTCACCACAGAGGAAGGGA +
Preference number: 5 (lower is better)
Translates to: FSVRAPMVKGIPCQVSGNWIFPP*SPQRKG
Trigger: TCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCA...ATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS TCA 90 bp GAAGTTGTCATTAGCACCCAGCTTCGATCTGCTCAGCATTCCCAGTaGCTGTGCCAGACAACTAATCTAGATTCATTTCCTGCTGACTTT +
Preference number: 5 (lower is better)
Translates to: EVVISTQLRSAQHSQ*LCQTTNLDSFPADF
Trigger: AAAGTCAGCAGGAAATGAATCTAGATTAGTTGTCTGGCACAGTCACTGGGAATGCTGAGCAGATCGAAGCTGGGTGCTAATGACAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534662.1
CDS GCA 90 bp TTCATGATGGGCCACTTTGTCCTTCCAGCTCTTGGTCTTATTAGTTaGCATCTCCAGCTTCTTTTTAACTTCCTCGTACTGCTCAAGTGC +
Preference number: 5 (lower is better)
Translates to: FMMGHFVLPALGLIS*HLQLLFNFLVLLKC
Trigger: GCACTTGAGCAGTACGAGGAAGTTAAAAAGAAGCTGGAGATGGCAACTAATAAGACCAAGAGCTGGAAGGACAAAGTGGCCCATCATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp GTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGATGTTCAAATTGTTCTaGCTGCCAACCTCCTCCCAT +
Preference number: 5 (lower is better)
Translates to: VRAPMVKGIPCQVSGNGKMFKLF*LPTSSH
Trigger: ATGGGAGGAGGTTGGCAGCAAGAACAATTTGAACAT...CTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp GCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCGAACCCATTTCTTTCCATCTTaGTCAGGCAAGGACTCTACA +
Preference number: 5 (lower is better)
Translates to: APMVKGIPCQVSGNGKRTHFFPS*SGKDST
Trigger: TGTAGAGTCCTTGCCTGACAAAGATGGAAAGAAATG...GGTTCGCTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp TCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTAATACCTCTGGAGTTCCTTCATTaGTCGCTCCAGTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: SASTSIRTPEVLCPHLIPLEFLH*SLQFLL
Trigger: CAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAG...AGGTATTAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp CTTCTCTGTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAACAGTTCAGAGGACTTTaGAGCAACCTGTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: LLCQSTNGQRHSMSSVRKQFRGL*SNLFFH
Trigger: ATGGAAGAACAGGTTGCTCAAAAGTCCTCTGAACTG...TTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGACAGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp ATCTTAGTAGAAGCTAGAAAACCTCTACTAACAGGATCACATTCCAAAAGGGCACACTGTCTCTTCATCTaGCCGGGCCTGTCTCTCATC +
Preference number: 5 (lower is better)
Translates to: ILVEARKPLLTGSHSKRAHCLFI*PGLSLI
Trigger: GATGAGAGACAGGCCCGGCAAGATGAAGAGACAGTG...TGCCCTTTTGGAATGTGATCCTGTTAGTAGAGGTTTTCTAGCTTCTACTAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp GTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGTTGTCCTTCCAGCTCTaGGTCTTATTAGTTGCCATC +
Preference number: 5 (lower is better)
Translates to: VRAPMVKGIPCQVSGNGKLSFQL*VLLVAI
Trigger: GATGGCAACTAATAAGACCAAGAGCTGGAAGGACAA...CTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp GTCAGAGCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCGAGAGAAAATTAGGTaGACAATATGGGGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: VRAPMVKGIPCQVSGNGKREKIR*TIWGKG
Trigger: CCCTTTGCCCCATATTGTCAACCTAATTTTCTCTCG...CTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGCTCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp CTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTACGAGACAGCCTGGCATATACTaGGTAGCACATCATTCACTA +
Preference number: 5 (lower is better)
Translates to: LTAWHILGSTSFTRESTRQPGIY*VAHHSL
Trigger: TAGTGAATGATGTGCTACCAAGTATATGCCAGGCTG...TCTCGTACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp TCATTAAAGACTTCATTAATTGCCATAGACACAGTCTGCCGGTCCATGCCTTTGCTTGTCAAAGTTGTCTaGGACAGCACAGGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: SLKTSLIAIDTVCRSMPLLVKVV*DSTGSS
Trigger: GCTGCTTCCTGTGCTGTCCAAGACAACTTTGACAAG...CAAAGGCATGGACCGGCAGACTGTGTCTATGGCAATTAATGAAGTCTTTAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS GCA 90 bp TCTCGAATAAGACTAAGGGTACCTCATCAAACATACCTACCAGACTaGTCTAAAATAGGCCCTTATTTAGCCCCAGAAGCAAGGGTTTCC +
Preference number: 5 (lower is better)
Translates to: SRIRLRVPHQTYLPD*SKIGPYLAPEARVS
Trigger: GGAAACCCTTGCTTCTGGGGCTAAATAAGGGCCTATTTTAGAGCAGTCTGGTAGGTATGTTTGATGAGGTACCCTTAGTCTTATTCGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524817.5
CDS-3UTR CAA 90 bp TACTCGGAAAAGGAAACACGCTGCCAAAGGAAAGAGCTGACATCCAGTCCACAGCTTGTCAAAGTTGTCTaGGACCTTTTCCAAAATGAA +
Preference number: 5 (lower is better)
Translates to: YSEKETRCQRKELTSSPQLVKVV*DLFQNE
Trigger: TTCATTTTGGAAAAGGTCCAAGACAACTTTGACAAG...CTGTGGACTGGATGTCAGCTCTTTCCTTTGGCAGCGTGTTTCCTTTTCCGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR CAA 90 bp TACTCGGAAAAGGAAACACGCTGCCAAAGGAAAGAGCTGACATCCAGTCCACAGTTTATAATGTTCAAATaGTTCTTGCTGCCAACCTCC +
Preference number: 5 (lower is better)
Translates to: YSEKETRCQRKELTSSPQFIMFK*FLLPTS
Trigger: GGAGGTTGGCAGCAAGAACAATTTGAACATTATAAA...CTGTGGACTGGATGTCAGCTCTTTCCTTTGGCAGCGTGTTTCCTTTTCCGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp TCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTAATACCTATGTTCAAATTGTTCTaGCTGCCAACCTCCTCCCAT +
Preference number: 5 (lower is better)
Translates to: SASTSIRTPEVLCPHLIPMFKLF*LPTSSH
Trigger: ATGGGAGGAGGTTGGCAGCAAGAACAATTTGAACAT...AGGTATTAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp ATGTTCAAATTGTTCTTGCTGCCAACCTCCTCCCATAGCTTCTGTAAGCTTCTTATGTTCAAATTGTTCTaGCTGCCAACCTCCTCCCAT +
Preference number: 5 (lower is better)
Translates to: MFKLFLLPTSSHSFCKLLMFKLF*LPTSSH
Trigger: ATGGGAGGAGGTTGGCAGCAAGAACAATTTGAACAT...AAGAAGCTTACAGAAGCTATGGGAGGAGGTTGGCAGCAAGAACAATTTGAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS-3UTR CAA 90 bp GCACCAATGGTCAAAGGCATTCCATGTCAAGTGTCAGGAAATGGAAAGCGAACCTTTATAATGTTCAAATaGTTCTTGCTGCCAACCTCC +
Preference number: 5 (lower is better)
Translates to: APMVKGIPCQVSGNGKRTFIMFK*FLLPTS
Trigger: GGAGGTTGGCAGCAAGAACAATTTGAACATTATAAA...GGTTCGCTTTCCATTTCCTGACACTTGACATGGAATGCCTTTGACCATTGGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp GTTAGACGTATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAACATTTCTTTCCATCTTaGTCAGGCAAGGACTCTACA +
Preference number: 5 (lower is better)
Translates to: VRRISVGYFLRCHHRGREHFFPS*SGKDST
Trigger: TGTAGAGTCCTTGCCTGACAAAGATGGAAAGAAATG...TTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATACGTCTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp TCTTTTCAGGTAACCCTTGTTTGCAGGAAGATAAATAAGAAGGCTTCCTTAGGACTGGAGTTCCTTCATTaGTCGCTCCAGTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: SFQVTLVCRKINKKASLGLEFLH*SLQFLL
Trigger: CAAGAGGAACTGGAGCGACAAATGAAGGAACTCCAG...TCCTAAGGAAGCCTTCTTATTTATCTTCCTGCAAACAAGGGTTACCTGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318950.11
ENST00000447399.6
ENST00000534562.1
CDS-3UTR CAA 90 bp TATAATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGTTGTCCTTCCAGCTCTaGGTCTTATTAGTTGCCATC +
Preference number: 5 (lower is better)
Translates to: YNPLTAWHILGSTSFTRELSFQL*VLLVAI
Trigger: GATGGCAACTAATAAGACCAAGAGCTGGAAGGACAA...CTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATTATA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp TATAATCCTCTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGCGAGAGAAAATTAGGTaGACAATATGGGGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: YNPLTAWHILGSTSFTREREKIR*TIWGKG
Trigger: CCCTTTGCCCCATATTGTCAACCTAATTTTCTCTCG...CTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAGAGGATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp TCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTAATACCTCAGCCTGGCATATACTaGGTAGCACATCATTCACTA +
Preference number: 5 (lower is better)
Translates to: SASTSIRTPEVLCPHLIPQPGIY*VAHHSL
Trigger: TAGTGAATGATGTGCTACCAAGTATATGCCAGGCTG...AGGTATTAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp TCTTTTCAGGTAACCCTTGTTTGCAGGAAGATAAATAAGAAGGCTTCCTTAGGACCATGCAGAGACTATTaGACTCCTAAGGCCACACTG +
Preference number: 5 (lower is better)
Translates to: SFQVTLVCRKINKKASLGPCRDY*TPKATL
Trigger: CAGTGTGGCCTTAGGAGTCAAATAGTCTCTGCATGG...TCCTAAGGAAGCCTTCTTATTTATCTTCCTGCAAACAAGGGTTACCTGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR CAA 90 bp GGCAAGGACTCTACACAGCAATTTTCATCCAAGAGAATGTCTCCTTTCTTATCCCATTTCTTTCCATCTTaGTCAGGCAAGGACTCTACA +
Preference number: 5 (lower is better)
Translates to: GKDSTQQFSSKRMSPFLSHFFPS*SGKDST
Trigger: TGTAGAGTCCTTGCCTGACAAAGATGGAAAGAAATG...GGATAAGAAAGGAGACATTCTCTTGGATGAAAATTGCTGTGTAGAGTCCTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534562.1
CDS-3UTR CAA 90 bp GTTAGACGTATTTCTGTTGGATATTTCCTCCGTTGTCACCACAGAGGAAGGGAAAGTAGAATGAATGGCTaGAATCCACTCCTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: VRRISVGYFLRCHHRGRESRMNG*NPLLFL
Trigger: AAGAAACAGGAGTGGATTCAAGCCATTCATTCTACT...TTCCCTTCCTCTGTGGTGACAACGGAGGAAATATCCAACAGAAATACGTCTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp ATGCACTCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTAAGTAGAATGAATGGCTaGAATCCACTCCTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: MHSASTSIRTPEVLCPHLSRMNG*NPLLFL
Trigger: AAGAAACAGGAGTGGATTCAAGCCATTCATTCTACT...TAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGAGTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp CTCACAGCCTGGCATATACTTGGTAGCACATCATTCACTAGAGAGAGTACGAGATTTACAATTTTAAGCTaGATTGCTGTCCACGGAGTT +
Preference number: 5 (lower is better)
Translates to: LTAWHILGSTSFTRESTRFTILS*IAVHGV
Trigger: AACTCCGTGGACAGCAATCAAGCTTAAAATTGTAAA...TCTCGTACTCTCTCTAGTGAATGATGTGCTACCAAGTATATGCCAGGCTGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp TCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTAATACCTCTGTTTAAAAGGATATaGCCTCCTAGACATAGTGCC +
Preference number: 5 (lower is better)
Translates to: SASTSIRTPEVLCPHLIPLFKRI*PPRHSA
Trigger: GGCACTATGTCTAGGAGGCAATATCCTTTTAAACAG...AGGTATTAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS CCA 90 bp CGTGTTGAAGATGCCAAGCTCTTATCAGAGGTAATTCTGGGTTTGTaGATTTTCTCGAATAAGACTAAGGGTACCTCATCAAACATACCT +
Preference number: 5 (lower is better)
Translates to: RVEDAKLLSEVILGL*IFSNKTKGTSSNIP
Trigger: AGGTATGTTTGATGAGGTACCCTTAGTCTTATTCGAGAAAATCCACAAACCCAGAATTACCTCTGATAAGAGCTTGGCATCTTCAACACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524817.5
CDS-3UTR CAA 90 bp TCTAATATAAGTTCATTAAAGACTTCATTAATTGCCATAGACACAGTCTGCCGGTGCCGGTCCATGCCTTaGCTAAACTGTCCATTTCCA +
Preference number: 5 (lower is better)
Translates to: SNISSLKTSLIAIDTVCRCRSMP*LNCPFP
Trigger: TGGAAATGGACAGTTTAGCAAAGGCATGGACCGGCA...CCGGCAGACTGTGTCTATGGCAATTAATGAAGTCTTTAATGAACTTATATTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS-3UTR CAA 90 bp TCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTAATACCTTCAATCTTGTCAAAGTaGTCTTGGACCTTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: SASTSIRTPEVLCPHLIPSILSK*SWTFSK
Trigger: TTTGGAAAAGGTCCAAGACAACTTTGACAAGATTGA...AGGTATTAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR CAA 90 bp TCAGCAAGCACTAGCATAAGAACACCTGAGGTTCTCTGTCCTCATTTAATACCTGTCCAACACATCCTATaGAATTCAATCTTGTCAAAG +
Preference number: 5 (lower is better)
Translates to: SASTSIRTPEVLCPHLIPVQHIL*NSILSK
Trigger: CTTTGACAAGATTGAATTCAATAGGATGTGTTGGAC...AGGTATTAAATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR CAA 90 bp TCTTTTCAGGTAACCCTTGTTTGCAGGAAGATAAATAAGAAGGCTTCCTTAGGAAGTAGAATGAATGGCTaGAATCCACTCCTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: SFQVTLVCRKINKKASLGSRMNG*NPLLFL
Trigger: AAGAAACAGGAGTGGATTCAAGCCATTCATTCTACT...TCCTAAGGAAGCCTTCTTATTTATCTTCCTGCAAACAAGGGTTACCTGAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318950.11
ENST00000447399.6
ENST00000534562.1
CDS-3UTR CAA 90 bp ATCTTAGTAGAAGCTAGAAAACCTCTACTAACAGGATCACATTCCAAAAGGGCATTAGACGTATTTCTGTaGGATATTTCCTCCGTTGTC +
Preference number: 5 (lower is better)
Translates to: ILVEARKPLLTGSHSKRALDVFL*DISSVV
Trigger: GACAACGGAGGAAATATCCAACAGAAATACGTCTAA...TGCCCTTTTGGAATGTGATCCTGTTAGTAGAGGTTTTCTAGCTTCTACTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp TCTTTTCAGGTAACCCTTGTTTGCAGGAAGATAAATAAGAAGGCTTCCTTAGGACTATTGAATTCAATCTaGTCAAAGTTGTCTTGGACC +
Preference number: 5 (lower is better)
Translates to: SFQVTLVCRKINKKASLGLLNSI*SKLSWT
Trigger: GGTCCAAGACAACTTTGACAAGATTGAATTCAATAG...TCCTAAGGAAGCCTTCTTATTTATCTTCCTGCAAACAAGGGTTACCTGAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318950.11
CDS-3UTR CAA 90 bp ATGCCTTTGCTAAACTGTCCATTTCCAATAAGCTCAATAAGTTCCCATGCAGAAGTCCAACACATCCTATaGAATTCAATCTTGTCAAAG +
Preference number: 5 (lower is better)
Translates to: MPLLNCPFPISSISSHAEVQHIL*NSILSK
Trigger: CTTTGACAAGATTGAATTCAATAGGATGTGTTGGAC...TTCTGCATGGGAACTTATTGAGCTTATTGGAAATGGACAGTTTAGCAAAGGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS-3UTR CAA 90 bp TCTTTTCAGGTAACCCTTGTTTGCAGGAAGATAAATAAGAAGGCTTCCTTAGGATTTACAATTTTAAGCTaGATTGCTGTCCACGGAGTT +
Preference number: 5 (lower is better)
Translates to: SFQVTLVCRKINKKASLGFTILS*IAVHGV
Trigger: AACTCCGTGGACAGCAATCAAGCTTAAAATTGTAAA...TCCTAAGGAAGCCTTCTTATTTATCTTCCTGCAAACAAGGGTTACCTGAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS-3UTR CAA 90 bp TCTAATATAAGTTCATTAAAGACTTCATTAATTGCCATAGACACAGTCTGCCGGTCAATCTTGTCAAAGTaGTCTTGGACAGCACAGGAA +
Preference number: 5 (lower is better)
Translates to: SNISSLKTSLIAIDTVCRSILSK*SWTAQE
Trigger: TTCCTGTGCTGTCCAAGACAACTTTGACAAGATTGA...CCGGCAGACTGTGTCTATGGCAATTAATGAAGTCTTTAATGAACTTATATTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS GCA 90 bp TCAACTTCCCACAAAACTGCAGTAATACATATAGCATATTTCACCTaGGAATTCTTTGCACAAAAACAATCTATTAACTCTCAACACGGC +
Preference number: 5 (lower is better)
Translates to: STSHKTAVIHIAYFT*EFFAQKQSINSQHG
Trigger: GCCGTGTTGAGAGTTAATAGATTGTTTTTGTGCAAAGAATTCGCAGGTGAAATATGCTATATGTATTACTGCAGTTTTGTGGGAAGTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524817.5
CDS-3UTR CAA 90 bp TTTCCAATAAGCTCAATAAGTTCCCATGCAGAAAGGCCATTTTTACTGTCATCATTTATAATGTTCAAATaGTTCTTGCTGCCAACCTCC +
Preference number: 5 (lower is better)
Translates to: FPISSISSHAERPFLLSSFIMFK*FLLPTS
Trigger: GGAGGTTGGCAGCAAGAACAATTTGAACATTATAAA...TGATGACAGTAAAAATGGCCTTTCTGCATGGGAACTTATTGAGCTTATTGGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526358.5
CDS CAA 90 bp CCGCTGTGGTCCTGGTCGAGTGCGGTGAAGGCGTGCCAGATGGCTTaGAGCAGCTCCTCCTTCAAGCTCCCCATGGCCGCGGCCCTGCTG +
Preference number: 6 (lower is better)
Translates to: PLWSWSSAVKACQMA*SSSSFKLPMAAALL
Trigger: CAGCAGGGCCGCGGCCATGGGGAGCTTGAAGGAGGAGCTGCTCAAAGCCATCTGGCACGCCTTCACCGCACTCGACCAGGACCACAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318950.11
ENST00000447399.6
ENST00000524817.5
ENST00000526358.5
ENST00000531814.5
CDS TCA 72 bp ATGGCCTCCTGCAGGGCCTGTTCCTTCAGGACACGCTaGTTCTCCAACTCCTGCTTCTCCGCCTCGGTTGTC +
Preference number: 6 (lower is better)
Translates to: MASCRACSFRTR*FSNSCFSASVV
Trigger: GACAACCGAGGCGGAGAAGCAGGAGTTGGAGAATCAGCGTGTCCTGAAGGAACAGGCCCTGCAGGAGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS CCA 72 bp ACTCCAGCCGGTCGAGTCTCCACAGTCTTTCTAATCTaGACAGCACCTCGAGCTCAGTCACAGCCAGAGCAG +
Preference number: 6 (lower is better)
Translates to: TPAGRVSTVFLI*TAPRAQSQPEQ
Trigger: CTGCTCTGGCTGTGACTGAGCTCGAGGTGCTGTCCAGATTAGAAAGACTGTGGAGACTCGACCGGCTGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524817.5
CDS CCA 72 bp AGGCCTCTGCCTGCATACCAATGGCCCTCTCTGGTCTaGAGCGTGTTGAAGATGCCAAGCTCTTATCAGAGG +
Preference number: 6 (lower is better)
Translates to: RPLPAYQWPSLV*SVLKMPSSYQR
Trigger: CCTCTGATAAGAGCTTGGCATCTTCAACACGCTCCAGACCAGAGAGGGCCATTGGTATGCAGGCAGAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524817.5
CDS CAA 90 bp CCTTCAGGACACGCTGATTCTCCAACTCCTGCTTCTCCGCCTCGGTaGTCTGAATGGCCTGCTGCTGCTCCAAGTGCCACTTTTCTAGTT +
Preference number: 6 (lower is better)
Translates to: PSGHADSPTPASPPR*SEWPAAAPSATFLV
Trigger: AACTAGAAAAGTGGCACTTGGAGCAGCAGCAGGCCATTCAGACAACCGAGGCGGAGAAGCAGGAGTTGGAGAATCAGCGTGTCCTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS TCA 72 bp AAAGGCAAAGTCTGCAAACAAATCTGGCACCTGGCCTaGAGCTTCCGCACTGTCTCTTCATCTTGCCGGGCC +
Preference number: 6 (lower is better)
Translates to: KGKVCKQIWHLA*SFRTVSSSCRA
Trigger: GGCCCGGCAAGATGAAGAGACAGTGCGGAAGCTTCAGGCCAGGTGCCAGATTTGTTTGCAGACTTTGCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524817.5
CDS TCA 72 bp TTCCTTATTCCTCAAAACCTGACGGCAACGTTGGCCTaGACAGGCCTCTGCCTGCATACCAATGGCCCTCTC +
Preference number: 6 (lower is better)
Translates to: FLIPQNLTATLA*TGLCLHTNGPL
Trigger: GAGAGGGCCATTGGTATGCAGGCAGAGGCCTGTTCAGGCCAACGTTGCCGTCAGGTTTTGAGGAATAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524817.5
CDS CCA 72 bp TCTCCAACTCCTGCTTCTCCGCCTCGGTTGTCTGAATaGCCTGCTGCTGCTCCAAGTGCCACTTTTCTAGTT +
Preference number: 6 (lower is better)
Translates to: SPTPASPPRLSE*PAAAPSATFLV
Trigger: AACTAGAAAAGTGGCACTTGGAGCAGCAGCAGGCCATTCAGACAACCGAGGCGGAGAAGCAGGAGTTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS TCA 72 bp TCATCCCTGAAGTGCTCTTCAAGGGCAACTGGGTCATaGGGAACCTTCAGCACCGTGCACAGGTTATGGGAA +
Preference number: 6 (lower is better)
Translates to: SSLKCSSRATGS*GTFSTVHRLWE
Trigger: TTCCCATAACCTGTGCACGGTGCTGAAGGTTCCTCATGACCCAGTTGCCCTTGAAGAGCACTTCAGGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318950.11
ENST00000447399.6
ENST00000524817.5
ENST00000526358.5
ENST00000531814.5
CDS TCA 72 bp CTGCATACCAATGGCCCTCTCTGGTCTGGAGCGTGTTaGAGATGCCAAGCTCTTATCAGAGGTAATTCTGGG +
Preference number: 6 (lower is better)
Translates to: LHTNGPLWSGAC*RCQALIRGNSG
Trigger: CCCAGAATTACCTCTGATAAGAGCTTGGCATCTTCAACACGCTCCAGACCAGAGAGGGCCATTGGTATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524817.5
CDS TCA 72 bp GGGAGTTCCAAGAACCTGATTAACCTCACAGTGCAGTaGATGTGCACCTGTGGGGCCTATATATGCCTGGCA +
Preference number: 6 (lower is better)
Translates to: GSSKNLINLTVQ*MCTCGAYICLA
Trigger: TGCCAGGCATATATAGGCCCCACAGGTGCACATTCACTGCACTGTGAGGTTAATCAGGTTCTTGGAACTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524817.5
CDS CAA 90 bp TTCATCCTGAACCTTTCTGAAGGTGCCCTCCCAAGCCTTATGAAGTaGTCATTAGCACCCAGCTTCGATCTGCTCAGCATTCCCAGTGAC +
Preference number: 6 (lower is better)
Translates to: FILNLSEGALPSLMK*SLAPSFDLLSIPSD
Trigger: GTCACTGGGAATGCTGAGCAGATCGAAGCTGGGTGCTAATGACAACTTCATAAGGCTTGGGAGGGCACCTTCAGAAAGGTTCAGGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534662.1
CDS GCA 72 bp CTTCTCTCTCTCTTCAAGTTCTGCCTCAGTGAAAGCTaGAGGTCCCCAGTTAGTGATCAGGTGAGGGTTCTT +
Preference number: 6 (lower is better)
Translates to: LLSLFKFCLSES*RSPVSDQVRVL
Trigger: AAGAACCCTCACCTGATCACTAACTGGGGACCTGCAGCTTTCACTGAGGCAGAACTTGAAGAGAGAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS GCA 72 bp AGCTTCTTTTTAACTTCCTCGTACTGCTCAAGTGCTTaGTTCCGTTCTAACTCAAGCTGCTCCAGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: SFFLTSSYCSSA*FRSNSSCSSCS
Trigger: GGAGCAGCTGGAGCAGCTTGAGTTAGAACGGAAGCAAGCACTTGAGCAGTACGAGGAAGTTAAAAAGAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS CCA 72 bp TACATAAAGGCAAAGTCTGCAAACAAATCTGGCACCTaGCCTGAAGCTTCCGCACTGTCTCTTCATCTTGCC +
Preference number: 6 (lower is better)
Translates to: YIKAKSANKSGT*PEASALSLHLA
Trigger: GGCAAGATGAAGAGACAGTGCGGAAGCTTCAGGCCAGGTGCCAGATTTGTTTGCAGACTTTGCCTTTATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524817.5
CDS TCA 72 bp TCAGTGAAAGCTGCAGGTCCCCAGTTAGTGATCAGGTaGGGGTTCTTTGAACCTGGTTCTATCAGTCGAATT +
Preference number: 6 (lower is better)
Translates to: SVKAAGPQLVIR*GFFEPGSISRI
Trigger: AATTCGACTGATAGAACCAGGTTCAAAGAACCCTCACCTGATCACTAACTGGGGACCTGCAGCTTTCACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS TCA 72 bp CTAGAAGTAGCTTGCCAGGTTCATCCTGAACCTTTCTaGAGGTGCCCTCCCAAGCCTTATGAAGTTGTCATT +
Preference number: 6 (lower is better)
Translates to: LEVACQVHPEPF*RCPPKPYEVVI
Trigger: AATGACAACTTCATAAGGCTTGGGAGGGCACCTTCAGAAAGGTTCAGGATGAACCTGGCAAGCTACTTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534662.1
CDS GCA 72 bp AACAGGGGGTCAGAGATCAAAGACTGGACCCTGTGCTaGTACTGTAGTGAATACTTTTTAGTGTTGTCTCCC +
Preference number: 6 (lower is better)
Translates to: NRGSEIKDWTLC*YCSEYFLVLSP
Trigger: GGGAGACAACACTAAAAAGTATTCACTACAGTAGCAGCACAGGGTCCAGTCTTTGATCTCTGACCCCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524817.5
CDS GCA 72 bp GGCCACTTTGTCCTTCCAGCTCTTGGTCTTATTAGTTaGCATCTCCAGCTTCTTTTTAACTTCCTCGTACTG +
Preference number: 6 (lower is better)
Translates to: GHFVLPALGLIS*HLQLLFNFLVL
Trigger: CAGTACGAGGAAGTTAAAAAGAAGCTGGAGATGGCAACTAATAAGACCAAGAGCTGGAAGGACAAAGTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS GCA 72 bp AGACTAAGGGTACCTCATCAAACATACCTACCAGACTaGTCTAAAATAGGCCCTTATTTAGCCCCAGAAGCA +
Preference number: 6 (lower is better)
Translates to: RLRVPHQTYLPD*SKIGPYLAPEA
Trigger: TGCTTCTGGGGCTAAATAAGGGCCTATTTTAGAGCAGTCTGGTAGGTATGTTTGATGAGGTACCCTTAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524817.5
CDS TCA 72 bp TTTGAACCTGGTTCTATCAGTCGAATTAATCCTTCATaGTGGGCCACTTTGTCCTTCCAGCTCTTGGTCTTA +
Preference number: 6 (lower is better)
Translates to: FEPGSISRINPS*WATLSFQLLVL
Trigger: TAAGACCAAGAGCTGGAAGGACAAAGTGGCCCATCATGAAGGATTAATTCGACTGATAGAACCAGGTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318950.11
ENST00000447399.6
CDS CAA 72 bp GAAGATGCCAAGCTCTTATCAGAGGTAATTCTGGGTTaGTGGATTTTCTCGAATAAGACTAAGGGTACCTCA +
Preference number: 6 (lower is better)
Translates to: EDAKLLSEVILG*WIFSNKTKGTS
Trigger: TGAGGTACCCTTAGTCTTATTCGAGAAAATCCACAAACCCAGAATTACCTCTGATAAGAGCTTGGCATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524817.5
CDS CAA 90 bp GAGCGTGTTGAAGATGCCAAGCTCTTATCAGAGGTAATTCTGGGTTaGTGGATTTTCTCGAATAAGACTAAGGGTACCTCATCAAACATA +
Preference number: 6 (lower is better)
Translates to: ERVEDAKLLSEVILG*WIFSNKTKGTSSNI
Trigger: TATGTTTGATGAGGTACCCTTAGTCTTATTCGAGAAAATCCACAAACCCAGAATTACCTCTGATAAGAGCTTGGCATCTTCAACACGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524817.5
CDS TCA 72 bp AAGACTAGTATTTCTAGAATTATCTGGTTCCCTCTGTaGTCTAGTCTCTGCTGTGTCATAATCAACTTCCCA +
Preference number: 6 (lower is better)
Translates to: KTSISRIIWFPL*SSLCCVIINFP
Trigger: TGGGAAGTTGATTATGACACAGCAGAGACTAGATCACAGAGGGAACCAGATAATTCTAGAAATACTAGTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524817.5