Pregenerated sensors for SVIP (Homo sapiens)
Ensembl gene IDs: ENSG00000198168Ensembl transcript IDs: ENST00000354193.5, ENST00000525670.5, ENST00000533774.5
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCCTAGAGAGCACCAATCTGTGTGCAAAACTAATTAGTTCCACTTaGGATAAGTTAGAGGTACTTGCAAAGAATGGATCAAACCTGTTT | + |
|
Preference number: 1 (lower is better) Translates to: SLESTNLCAKLISST*DKLEVLAKNGSNLF Trigger: AAACAGGTTTGATCCATTCTTTGCAAGTACCTCTAACTTATCTCAAGTGGAACTAATTAGTTTTGCACACAGATTGGTGCTCTCTAGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR GCA 90 bp | AGAAAGGATTTGCAGAGTTCAAGGATGATATGCTCTAGCTCTATATaGACTCCGCTATCAATCATTCCTTTTACTTTCTGCCTTGAAAAA | + |
|
Preference number: 1 (lower is better) Translates to: RKDLQSSRMICSSSI*TPLSIIPFTFCLEK Trigger: TTTTTCAAGGCAGAAAGTAAAAGGAATGATTGATAGCGGAGTGCATATAGAGCTAGAGCATATCATCCTTGAACTCTGCAAATCCTTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR CCA 90 bp | CATGTTCCACTTTTCACGAAAAGTAATAGATCTGAATATCATTCATaGTTAACAATAGATAGTGTGACATTTGGGTATGACCTGCTGGTA | + |
|
Preference number: 1 (lower is better) Translates to: HVPLFTKSNRSEYHS*LTIDSVTFGYDLLV Trigger: TACCAGCAGGTCATACCCAAATGTCACACTATCTATTGTTAACCATGAATGATATTCAGATCTATTACTTTTCGTGAAAAGTGGAACATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR CAA 90 bp | CTAACATTTGGGTACCACCCCTTAGCTCCTGCGACCCATGTGGTTTaGGAGAAAGCTGATCACACTCACGGTGACAGGCCATGGTTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: LTFGYHPLAPATHVV*EKADHTHGDRPWLE Trigger: TTCCAACCATGGCCTGTCACCGTGAGTGTGATCAGCTTTCTCCAAAACCACATGGGTCGCAGGAGCTAAGGGGTGGTACCCAAATGTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR-3UTR GCA 90 bp | GGTTATTTTATGAGGGAGATGTCTGGACGTATGTGTGTATGTGCATGTGTGTGTCCACCCCTTAGCTCCTaGGACCCATGTGGTTTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: GYFMREMSGRMCVCACVCPPLSS*DPCGFG Trigger: TCCAAAACCACATGGGTCGCAGGAGCTAAGGGGTGG...ACACACACATGCACATACACACATACGTCCAGACATCTCCCTCATAAAATAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR CAA 90 bp | GTCATTTACCGGTTTCTCATAAGACATCCAGTCACTTCTTTTCCCTaGCCCTTTCCTAACACTGTTCCTAACATTTGGGTACCACCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: VIYRFLIRHPVTSFP*PFPNTVPNIWVPPL Trigger: AAGGGGTGGTACCCAAATGTTAGGAACAGTGTTAGGAAAGGGCAAGGGAAAAGAAGTGACTGGATGTCTTATGAGAAACCGGTAAATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR-3UTR CCA 90 bp | TGTATGAACACACCAAACAACCTTTGGTTCTGTTGCTCTTCTGAATCCCAATGTCACGGTGACAGGCCATaGTTGGAAGTAACATGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: CMNTPNNLWFCCSSESQCHGDRP*LEVTCS Trigger: GGAACATGTTACTTCCAACCATGGCCTGTCACCGTG...ACATTGGGATTCAGAAGAGCAACAGAACCAAAGGTTGTTTGGTGTGTTCATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR-3UTR TCA 90 bp | TGTATGAACACACCAAACAACCTTTGGTTCTGTTGCTCTTCTGAATCCCAATGTTGTGACATTTGGGTATaGCCTGCTGGTAGAAATAGG | + |
|
Preference number: 2 (lower is better) Translates to: CMNTPNNLWFCCSSESQCCDIWV*PAGRNR Trigger: CCTATTTCTACCAGCAGGTCATACCCAAATGTCACA...ACATTGGGATTCAGAAGAGCAACAGAACCAAAGGTTGTTTGGTGTGTTCATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR-3UTR GCA 90 bp | GGTTATTTTATGAGGGAGATGTCTGGACGTATGTGTGTATGTGCATGTGTGTGTACAATAGAACATCACTaGCCTCTGATGGTATCACTA | + |
|
Preference number: 2 (lower is better) Translates to: GYFMREMSGRMCVCACVCTIEHH*PLMVSL Trigger: TAGTGATACCATCAGAGGGCAGTGATGTTCTATTGT...ACACACACATGCACATACACACATACGTCCAGACATCTCCCTCATAAAATAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR-3UTR GCA 90 bp | TCAACACATATAGGCAGTCATGGCTACTTACCTCTTACTGGTCTATTCATGCAGTGCTCTAGCTCTATATaGACTCCGCTATCAATCATT | + |
|
Preference number: 2 (lower is better) Translates to: STHIGSHGYLPLTGLFMQCSSSI*TPLSII Trigger: AATGATTGATAGCGGAGTGCATATAGAGCTAGAGCA...CTGCATGAATAGACCAGTAAGAGGTAAGTAGCCATGACTGCCTATATGTGTTGA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR-3UTR CCA 90 bp | AATATACCTTATGTCTCAACACATATAGGCAGTCATGGCTACTTACCTCTTACTACTGTTCCTAACATTTaGGTACCACCCCTTAGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: NIPYVSTHIGSHGYLPLTTVPNI*VPPLSS Trigger: GGAGCTAAGGGGTGGTACCCAAATGTTAGGAACAGT...AGTAAGAGGTAAGTAGCCATGACTGCCTATATGTGTTGAGACATAAGGTATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR-3UTR TCA 90 bp | AATATACCTTATGTCTCAACACATATAGGCAGTCATGGCTACTTACCTCTTACTGGTAGAAATAGGGCATaGTTCCCTGGAAGTAAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: NIPYVSTHIGSHGYLPLTGRNRA*FPGSKS Trigger: TGACTTACTTCCAGGGAATCATGCCCTATTTCTACC...AGTAAGAGGTAAGTAGCCATGACTGCCTATATGTGTTGAGACATAAGGTATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR-3UTR GCA 90 bp | GGTTATTTTATGAGGGAGATGTCTGGACGTATGTGTGTATGTGCATGTGTGTGTACAGATGTAACGCGATaGAGCACAAATATAAGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: GYFMREMSGRMCVCACVCTDVTR*STNISS Trigger: ACTACTTATATTTGTGCTGCATCGCGTTACATCTGT...ACACACACATGCACATACACACATACGTCCAGACATCTCCCTCATAAAATAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR-3UTR GCA 90 bp | GGTTATTTTATGAGGGAGATGTCTGGACGTATGTGTGTATGTGCATGTGTGTGTTCATACATTCATACTTaGCTTCGCAGTTTCACATCT | + |
|
Preference number: 2 (lower is better) Translates to: GYFMREMSGRMCVCACVCSYIHT*LRSFTS Trigger: AGATGTGAAACTGCGAAGGCAAGTATGAATGTATGA...ACACACACATGCACATACACACATACGTCCAGACATCTCCCTCATAAAATAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR-3UTR GCA 90 bp | TGTATGAACACACCAAACAACCTTTGGTTCTGTTGCTCTTCTGAATCCCAATGTCTCAACATGTGGCCTTaGCATTTAAAAGAGCTATCA | + |
|
Preference number: 2 (lower is better) Translates to: CMNTPNNLWFCCSSESQCLNMWP*HLKELS Trigger: TGATAGCTCTTTTAAATGGCAAGGCCACATGTTGAG...ACATTGGGATTCAGAAGAGCAACAGAACCAAAGGTTGTTTGGTGTGTTCATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR-3UTR CCA 90 bp | TGTATGAACACACCAAACAACCTTTGGTTCTGTTGCTCTTCTGAATCCCAATGTTCCAAATACCAGCAGTaGAACAAACAGAAACACAGA | + |
|
Preference number: 2 (lower is better) Translates to: CMNTPNNLWFCCSSESQCSKYQQ*NKQKHR Trigger: TCTGTGTTTCTGTTTGTTCCACTGCTGGTATTTGGA...ACATTGGGATTCAGAAGAGCAACAGAACCAAAGGTTGTTTGGTGTGTTCATACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR-3UTR TCA 90 bp | AATATACCTTATGTCTCAACACATATAGGCAGTCATGGCTACTTACCTCTTACTCTGATGGTTATTTTATaGGGGAGATGTCTGGACGTA | + |
|
Preference number: 2 (lower is better) Translates to: NIPYVSTHIGSHGYLPLTLMVIL*GRCLDV Trigger: TACGTCCAGACATCTCCCTCATAAAATAACCATCAG...AGTAAGAGGTAAGTAGCCATGACTGCCTATATGTGTTGAGACATAAGGTATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR-3UTR GCA 90 bp | GGTTATTTTATGAGGGAGATGTCTGGACGTATGTGTGTATGTGCATGTGTGTGTTATAAAAATTTACAGTaGTCCTTCACATCAGCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: GYFMREMSGRMCVCACVCYKNLQ*SFTSAL Trigger: AAGGGCTGATGTGAAGGAGCACTGTAAATTTTTATA...ACACACACATGCACATACACACATACGTCCAGACATCTCCCTCATAAAATAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR-3UTR CCA 90 bp | ATGATATGCTCTAGCTCTATATGCACTCCGCTATCAATCATTCCTTTTACTTTCTTAGGGCTCAACATGTaGCCTTGCCATTTAAAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: MICSSSICTPLSIIPFTFLGLNM*PCHLKE Trigger: CTCTTTTAAATGGCAAGGCCACATGTTGAGCCCTAA...GAAAGTAAAAGGAATGATTGATAGCGGAGTGCATATAGAGCTAGAGCATATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR-3UTR TCA 90 bp | ATGATATGCTCTAGCTCTATATGCACTCCGCTATCAATCATTCCTTTTACTTTCTTGATGAAGCCCACTTaGTTGCAGATAATAAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: MICSSSICTPLSIIPFTFLMKPT*LQIINS Trigger: ACTGTTTATTATCTGCAATCAAGTGGGCTTCATCAA...GAAAGTAAAAGGAATGATTGATAGCGGAGTGCATATAGAGCTAGAGCATATCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR-3UTR GCA 90 bp | ATATCTGCAAATTTTAATTTAGGGCTCAACATGTGGCCTTGCCATTTAAAAGAGAAATCACCCACTAACTaGAGAAGAGCAAATGTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: ISANFNLGLNMWPCHLKEKSPTN*RRANVG Trigger: TCCTACATTTGCTCTTCTGCAGTTAGTGGGTGATTT...CTCTTTTAAATGGCAAGGCCACATGTTGAGCCCTAAATTAAAATTTGCAGATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR CCA 72 bp | TTTCCCTTGCCCTTTCCTAACACTGTTCCTAACATTTaGGTACCACCCCTTAGCTCCTGCGACCCATGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: FPLPFPNTVPNI*VPPLSSCDPCG Trigger: ACCACATGGGTCGCAGGAGCTAAGGGGTGGTACCCAAATGTTAGGAACAGTGTTAGGAAAGGGCAAGGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR CCA 72 bp | TTGGAGAAAGCTGATCACACTCACGGTGACAGGCCATaGTTGGAAGTAACATGTTCCACTTTTCACGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LEKADHTHGDRP*LEVTCSTFHEK Trigger: CTTTTCGTGAAAAGTGGAACATGTTACTTCCAACCATGGCCTGTCACCGTGAGTGTGATCAGCTTTCTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTATGAACACACCAAACAACCTTTGGTTCTGTTGCTCTTCTGAATCCCAATGTGCTCAACATGTGGCCTaGCCATTTAAAAGAGCTATC | + |
|
Preference number: 3 (lower is better) Translates to: CMNTPNNLWFCCSSESQCAQHVA*PFKRAI Trigger: GATAGCTCTTTTAAATGGCAAGGCCACATGTTGAGC...ACATTGGGATTCAGAAGAGCAACAGAACCAAAGGTTGTTTGGTGTGTTCATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR GCA 72 bp | TTGCAGAGTTCAAGGATGATATGCTCTAGCTCTATATaGACTCCGCTATCAATCATTCCTTTTACTTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LQSSRMICSSSI*TPLSIIPFTFC Trigger: GCAGAAAGTAAAAGGAATGATTGATAGCGGAGTGCATATAGAGCTAGAGCATATCATCCTTGAACTCTGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR-3UTR CAA 90 bp | ATGATATGCTCTAGCTCTATATGCACTCCGCTATCAATCATTCCTTTTACTTTCGTGGCTCAGTTTCCTTaGTGTAAAGCAAGTGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: MICSSSICTPLSIIPFTFVAQFP*CKASEL Trigger: AAGTTCACTTGCTTTACACAAAGGAAACTGAGCCAC...GAAAGTAAAAGGAATGATTGATAGCGGAGTGCATATAGAGCTAGAGCATATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR GCA 72 bp | AATGGAAGAAAGGATTTGCAGAGTTCAAGGATGATATaGTCTAGCTCTATATGCACTCCGCTATCAATCATT | + |
|
Preference number: 3 (lower is better) Translates to: NGRKDLQSSRMI*SSSICTPLSII Trigger: AATGATTGATAGCGGAGTGCATATAGAGCTAGAGCATATCATCCTTGAACTCTGCAAATCCTTTCTTCCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR GCA 72 bp | TCTGCAAATTTTAATTTAGGGCTCAACATGTGGCCTTaGCATTTAAAAGAGCTATCAGCCTTAATAGCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: SANFNLGLNMWP*HLKELSALIAN Trigger: GTTAGCTATTAAGGCTGATAGCTCTTTTAAATGGCAAGGCCACATGTTGAGCCCTAAATTAAAATTTGCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR CCA 72 bp | AAATATACCTTATGTCTCAACACATATAGGCAGTCATaGCTACTTACCTCTTACTGGTCTATTCATGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KYTLCLNTYRQS*LLTSYWSIHAE Trigger: TTCTGCATGAATAGACCAGTAAGAGGTAAGTAGCCATGACTGCCTATATGTGTTGAGACATAAGGTATATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR-3UTR CAA 90 bp | ATATCTGCAAATTTTAATTTAGGGCTCAACATGTGGCCTTGCCATTTAAAAGAGTTCATACATTCATACTaGCCTTCGCAGTTTCACATC | + |
|
Preference number: 3 (lower is better) Translates to: ISANFNLGLNMWPCHLKEFIHSY*PSQFHI Trigger: GATGTGAAACTGCGAAGGCAAGTATGAATGTATGAA...CTCTTTTAAATGGCAAGGCCACATGTTGAGCCCTAAATTAAAATTTGCAGATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| 3UTR CAA 72 bp | GGGTACCACCCCTTAGCTCCTGCGACCCATGTGGTTTaGGAGAAAGCTGATCACACTCACGGTGACAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GYHPLAPATHVV*EKADHTHGDRP Trigger: TGGCCTGTCACCGTGAGTGTGATCAGCTTTCTCCAAAACCACATGGGTCGCAGGAGCTAAGGGGTGGTACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR CCA 90 bp | ATATCTGCAAATTTTAATTTAGGGCTCAACATGTGGCCTTGCCATTTAAAAGAGCTTCCAGGTCCGGCGTaGGAGGCGCGGACTCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ISANFNLGLNMWPCHLKELPGPA*EARTPR Trigger: CCGGGGAGTCCGCGCCTCCCACGCCGGACCTGGAAG...CTCTTTTAAATGGCAAGGCCACATGTTGAGCCCTAAATTAAAATTTGCAGATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR TCA 90 bp | AATATACCTTATGTCTCAACACATATAGGCAGTCATGGCTACTTACCTCTTACTGCGGCAGGGATCACCTaGGGTCAGGAGTTCGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: NIPYVSTHIGSHGYLPLTAAGIT*GQEFET Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCCCTGCCGC...AGTAAGAGGTAAGTAGCCATGACTGCCTATATGTGTTGAGACATAAGGTATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR CCA 90 bp | ATATCTGCAAATTTTAATTTAGGGCTCAACATGTGGCCTTGCCATTTAAAAGAGCCTAAGTCCACCTTCTaGTGGGGGCCCGGATGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISANFNLGLNMWPCHLKEPKSTF*WGPGCS Trigger: GCTACATCCGGGCCCCCACCAGAAGGTGGACTTAGG...CTCTTTTAAATGGCAAGGCCACATGTTGAGCCCTAAATTAAAATTTGCAGATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR CCA 90 bp | GGTTATTTTATGAGGGAGATGTCTGGACGTATGTGTGTATGTGCATGTGTGTGTCTCCTGCGACCCATGTaGTTTTGGAGAAAGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: GYFMREMSGRMCVCACVCLLRPM*FWRKLI Trigger: GATCAGCTTTCTCCAAAACCACATGGGTCGCAGGAG...ACACACACATGCACATACACACATACGTCCAGACATCTCCCTCATAAAATAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR GCA 90 bp | AATATACCTTATGTCTCAACACATATAGGCAGTCATGGCTACTTACCTCTTACTCCACCCCTTAGCTCCTaGGACCCATGTGGTTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NIPYVSTHIGSHGYLPLTPPLSS*DPCGFG Trigger: TCCAAAACCACATGGGTCGCAGGAGCTAAGGGGTGG...AGTAAGAGGTAAGTAGCCATGACTGCCTATATGTGTTGAGACATAAGGTATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR CCA 90 bp | TCAACACATATAGGCAGTCATGGCTACTTACCTCTTACTGGTCTATTCATGCAGCGACCCATGTGGTTTTaGAGAAAGCTGATCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: STHIGSHGYLPLTGLFMQRPMWF*RKLITL Trigger: GAGTGTGATCAGCTTTCTCCAAAACCACATGGGTCG...CTGCATGAATAGACCAGTAAGAGGTAAGTAGCCATGACTGCCTATATGTGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR TCA 90 bp | TCAACACATATAGGCAGTCATGGCTACTTACCTCTTACTGGTCTATTCATGCAGGGTAGAAATAGGGCATaGTTCCCTGGAAGTAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: STHIGSHGYLPLTGLFMQGRNRA*FPGSKS Trigger: TGACTTACTTCCAGGGAATCATGCCCTATTTCTACC...CTGCATGAATAGACCAGTAAGAGGTAAGTAGCCATGACTGCCTATATGTGTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR GCA 90 bp | ATATCTGCAAATTTTAATTTAGGGCTCAACATGTGGCCTTGCCATTTAAAAGAGTATAAATATAGCCAATaGAGGCCGGGCGCGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISANFNLGLNMWPCHLKEYKYSQ*RPGAVA Trigger: AGCCACCGCGCCCGGCCTGCATTGGCTATATTTATA...CTCTTTTAAATGGCAAGGCCACATGTTGAGCCCTAAATTAAAATTTGCAGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR CCA 90 bp | TCAACACATATAGGCAGTCATGGCTACTTACCTCTTACTGGTCTATTCATGCAGTTAGGGCTCAACATGTaGCCTTGCCATTTAAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: STHIGSHGYLPLTGLFMQLGLNM*PCHLKE Trigger: CTCTTTTAAATGGCAAGGCCACATGTTGAGCCCTAA...CTGCATGAATAGACCAGTAAGAGGTAAGTAGCCATGACTGCCTATATGTGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR CCA 90 bp | ATGATATGCTCTAGCTCTATATGCACTCCGCTATCAATCATTCCTTTTACTTTCCACGGTGACAGGCCATaGTTGGAAGTAACATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MICSSSICTPLSIIPFTFHGDRP*LEVTCS Trigger: GGAACATGTTACTTCCAACCATGGCCTGTCACCGTG...GAAAGTAAAAGGAATGATTGATAGCGGAGTGCATATAGAGCTAGAGCATATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR CCA 90 bp | ATGATATGCTCTAGCTCTATATGCACTCCGCTATCAATCATTCCTTTTACTTTCACTGTTCCTAACATTTaGGTACCACCCCTTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MICSSSICTPLSIIPFTFTVPNI*VPPLSS Trigger: GGAGCTAAGGGGTGGTACCCAAATGTTAGGAACAGT...GAAAGTAAAAGGAATGATTGATAGCGGAGTGCATATAGAGCTAGAGCATATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR CCA 90 bp | TGTATGAACACACCAAACAACCTTTGGTTCTGTTGCTCTTCTGAATCCCAATGTTCATGTCCATTTTCCTaGGGTACAAAGGATAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: CMNTPNNLWFCCSSESQCSCPFS*GTKDRQ Trigger: CTGTCTATCCTTTGTACCCCAGGAAAATGGACATGA...ACATTGGGATTCAGAAGAGCAACAGAACCAAAGGTTGTTTGGTGTGTTCATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR CCA 90 bp | TGTATGAACACACCAAACAACCTTTGGTTCTGTTGCTCTTCTGAATCCCAATGTACATATAGGCAGTCATaGCTACTTACCTCTTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: CMNTPNNLWFCCSSESQCTYRQS*LLTSYW Trigger: CCAGTAAGAGGTAAGTAGCCATGACTGCCTATATGT...ACATTGGGATTCAGAAGAGCAACAGAACCAAAGGTTGTTTGGTGTGTTCATACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR TCA 90 bp | AATATACCTTATGTCTCAACACATATAGGCAGTCATGGCTACTTACCTCTTACTTGTGACATTTGGGTATaGCCTGCTGGTAGAAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: NIPYVSTHIGSHGYLPLTCDIWV*PAGRNR Trigger: CCTATTTCTACCAGCAGGTCATACCCAAATGTCACA...AGTAAGAGGTAAGTAGCCATGACTGCCTATATGTGTTGAGACATAAGGTATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR GCA 90 bp | ATGATATGCTCTAGCTCTATATGCACTCCGCTATCAATCATTCCTTTTACTTTCTTTTTGTCTTCTCTCTaGAGCCTCTGCAAGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: MICSSSICTPLSIIPFTFFLSSL*SLCKLC Trigger: GCAAAGCTTGCAGAGGCTGCAGAGAGAAGACAAAAA...GAAAGTAAAAGGAATGATTGATAGCGGAGTGCATATAGAGCTAGAGCATATCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR GCA 90 bp | TGTATGAACACACCAAACAACCTTTGGTTCTGTTGCTCTTCTGAATCCCAATGTAAATCACCCACTAACTaGAGAAGAGCAAATGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CMNTPNNLWFCCSSESQCKSPTN*RRANVG Trigger: TCCTACATTTGCTCTTCTGCAGTTAGTGGGTGATTT...ACATTGGGATTCAGAAGAGCAACAGAACCAAAGGTTGTTTGGTGTGTTCATACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR GCA 90 bp | TCAACACATATAGGCAGTCATGGCTACTTACCTCTTACTGGTCTATTCATGCAGTCATACATTCATACTTaGCTTCGCAGTTTCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: STHIGSHGYLPLTGLFMQSYIHT*LRSFTS Trigger: AGATGTGAAACTGCGAAGGCAAGTATGAATGTATGA...CTGCATGAATAGACCAGTAAGAGGTAAGTAGCCATGACTGCCTATATGTGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR GCA 90 bp | TCAACACATATAGGCAGTCATGGCTACTTACCTCTTACTGGTCTATTCATGCAGAAAACTGGCAAGAGCTaGTTTTGTCTTCTAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: STHIGSHGYLPLTGLFMQKTGKS*FCLLRT Trigger: TGTTCTTAGAAGACAAAAGCAGCTCTTGCCAGTTTT...CTGCATGAATAGACCAGTAAGAGGTAAGTAGCCATGACTGCCTATATGTGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR CCA 90 bp | TGTATGAACACACCAAACAACCTTTGGTTCTGTTGCTCTTCTGAATCCCAATGTACACCAAACAACCTTTaGTTCTGTTGCTCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CMNTPNNLWFCCSSESQCTPNNL*FCCSSE Trigger: TTCAGAAGAGCAACAGAACCAAAGGTTGTTTGGTGT...ACATTGGGATTCAGAAGAGCAACAGAACCAAAGGTTGTTTGGTGTGTTCATACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR TCA 90 bp | TGTATGAACACACCAAACAACCTTTGGTTCTGTTGCTCTTCTGAATCCCAATGTTTGATGAAGCCCACTTaGTTGCAGATAATAAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: CMNTPNNLWFCCSSESQCLMKPT*LQIINS Trigger: ACTGTTTATTATCTGCAATCAAGTGGGCTTCATCAA...ACATTGGGATTCAGAAGAGCAACAGAACCAAAGGTTGTTTGGTGTGTTCATACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR GCA 90 bp | TCAACACATATAGGCAGTCATGGCTACTTACCTCTTACTGGTCTATTCATGCAGTATAAAAATTTACAGTaGTCCTTCACATCAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: STHIGSHGYLPLTGLFMQYKNLQ*SFTSAL Trigger: AAGGGCTGATGTGAAGGAGCACTGTAAATTTTTATA...CTGCATGAATAGACCAGTAAGAGGTAAGTAGCCATGACTGCCTATATGTGTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR CCA 90 bp | ATATCTGCAAATTTTAATTTAGGGCTCAACATGTGGCCTTGCCATTTAAAAGAGTATGAGGGAGATGTCTaGACGTATGTGTGTATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISANFNLGLNMWPCHLKEYEGDV*TYVCMC Trigger: GCACATACACACATACGTCCAGACATCTCCCTCATA...CTCTTTTAAATGGCAAGGCCACATGTTGAGCCCTAAATTAAAATTTGCAGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR GCA 90 bp | AATATACCTTATGTCTCAACACATATAGGCAGTCATGGCTACTTACCTCTTACTACAATAGAACATCACTaGCCTCTGATGGTATCACTA | + |
|
Preference number: 4 (lower is better) Translates to: NIPYVSTHIGSHGYLPLTTIEHH*PLMVSL Trigger: TAGTGATACCATCAGAGGGCAGTGATGTTCTATTGT...AGTAAGAGGTAAGTAGCCATGACTGCCTATATGTGTTGAGACATAAGGTATATT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR GCA 90 bp | ATGATATGCTCTAGCTCTATATGCACTCCGCTATCAATCATTCCTTTTACTTTCCTCAACATGTGGCCTTaGCATTTAAAAGAGCTATCA | + |
|
Preference number: 4 (lower is better) Translates to: MICSSSICTPLSIIPFTFLNMWP*HLKELS Trigger: TGATAGCTCTTTTAAATGGCAAGGCCACATGTTGAG...GAAAGTAAAAGGAATGATTGATAGCGGAGTGCATATAGAGCTAGAGCATATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR GCA 90 bp | ATGATATGCTCTAGCTCTATATGCACTCCGCTATCAATCATTCCTTTTACTTTCAACCTTTGGTTCTGTTaGTCTTCTGAATCCCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: MICSSSICTPLSIIPFTFNLWFC*SSESQC Trigger: ACATTGGGATTCAGAAGAGCAACAGAACCAAAGGTT...GAAAGTAAAAGGAATGATTGATAGCGGAGTGCATATAGAGCTAGAGCATATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR TCA 90 bp | AATATACCTTATGTCTCAACACATATAGGCAGTCATGGCTACTTACCTCTTACTGGAAACTTAGTGTTTTaGGTTACTGGAACCAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: NIPYVSTHIGSHGYLPLTGNLVF*VTGTKT Trigger: AGTTTTGGTTCCAGTAACTCAAAACACTAAGTTTCC...AGTAAGAGGTAAGTAGCCATGACTGCCTATATGTGTTGAGACATAAGGTATATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR GCA 90 bp | ATGATATGCTCTAGCTCTATATGCACTCCGCTATCAATCATTCCTTTTACTTTCACAGATGTAACGCGATaGAGCACAAATATAAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: MICSSSICTPLSIIPFTFTDVTR*STNISS Trigger: ACTACTTATATTTGTGCTGCATCGCGTTACATCTGT...GAAAGTAAAAGGAATGATTGATAGCGGAGTGCATATAGAGCTAGAGCATATCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR GCA 90 bp | AATATACCTTATGTCTCAACACATATAGGCAGTCATGGCTACTTACCTCTTACTAGTTCAAGGATGATATaGTCTAGCTCTATATGCACT | + |
|
Preference number: 4 (lower is better) Translates to: NIPYVSTHIGSHGYLPLTSSRMI*SSSICT Trigger: AGTGCATATAGAGCTAGAGCATATCATCCTTGAACT...AGTAAGAGGTAAGTAGCCATGACTGCCTATATGTGTTGAGACATAAGGTATATT 37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR CCA 90 bp | ATATCTGCAAATTTTAATTTAGGGCTCAACATGTGGCCTTGCCATTTAAAAGAGTCCAAATACCAGCAGTaGAACAAACAGAAACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISANFNLGLNMWPCHLKESKYQQ*NKQKHR Trigger: TCTGTGTTTCTGTTTGTTCCACTGCTGGTATTTGGA...CTCTTTTAAATGGCAAGGCCACATGTTGAGCCCTAAATTAAAATTTGCAGATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR CAA 90 bp | ATATCTGCAAATTTTAATTTAGGGCTCAACATGTGGCCTTGCCATTTAAAAGAGCATAGGGACGACAGCTaGAGAACCCTGACCGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ISANFNLGLNMWPCHLKEHRDDS*RTLTGS Trigger: GGACCCGGTCAGGGTTCTCAAGCTGTCGTCCCTATG...CTCTTTTAAATGGCAAGGCCACATGTTGAGCCCTAAATTAAAATTTGCAGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR CAA 90 bp | TCAACACATATAGGCAGTCATGGCTACTTACCTCTTACTGGTCTATTCATGCAGCAGCCTCTGCAAGCTTaGCTCTTTTCTCTTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: STHIGSHGYLPLTGLFMQQPLQA*LFSLPG Trigger: ACCTGGAAGAGAAAAGAGCAAAGCTTGCAGAGGCTG...CTGCATGAATAGACCAGTAAGAGGTAAGTAGCCATGACTGCCTATATGTGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR CAA 90 bp | GGTTATTTTATGAGGGAGATGTCTGGACGTATGTGTGTATGTGCATGTGTGTGTGGTGACAGGCCATGGTaGGAAGTAACATGTTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: GYFMREMSGRMCVCACVCGDRPW*EVTCST Trigger: AGTGGAACATGTTACTTCCAACCATGGCCTGTCACC...ACACACACATGCACATACACACATACGTCCAGACATCTCCCTCATAAAATAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR CAA 90 bp | TCAACACATATAGGCAGTCATGGCTACTTACCTCTTACTGGTCTATTCATGCAGGCGACCCATGTGGTTTaGGAGAAAGCTGATCACACT | + |
|
Preference number: 5 (lower is better) Translates to: STHIGSHGYLPLTGLFMQATHVV*EKADHT Trigger: AGTGTGATCAGCTTTCTCCAAAACCACATGGGTCGC...CTGCATGAATAGACCAGTAAGAGGTAAGTAGCCATGACTGCCTATATGTGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR CAA 90 bp | GGTTATTTTATGAGGGAGATGTCTGGACGTATGTGTGTATGTGCATGTGTGTGTTGGCAAGAGCTGCTTTaGTCTTCTAAGAACATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GYFMREMSGRMCVCACVCWQELL*SSKNIA Trigger: TGCTATGTTCTTAGAAGACAAAAGCAGCTCTTGCCA...ACACACACATGCACATACACACATACGTCCAGACATCTCCCTCATAAAATAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR CAA 90 bp | TGTATGAACACACCAAACAACCTTTGGTTCTGTTGCTCTTCTGAATCCCAATGTTTCATACATTCATACTaGCCTTCGCAGTTTCACATC | + |
|
Preference number: 5 (lower is better) Translates to: CMNTPNNLWFCCSSESQCFIHSY*PSQFHI Trigger: GATGTGAAACTGCGAAGGCAAGTATGAATGTATGAA...ACATTGGGATTCAGAAGAGCAACAGAACCAAAGGTTGTTTGGTGTGTTCATACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR CAA 90 bp | AATATACCTTATGTCTCAACACATATAGGCAGTCATGGCTACTTACCTCTTACTGCTCAACATGTGGCCTaGCCATTTAAAAGAGCTATC | + |
|
Preference number: 5 (lower is better) Translates to: NIPYVSTHIGSHGYLPLTAQHVA*PFKRAI Trigger: GATAGCTCTTTTAAATGGCAAGGCCACATGTTGAGC...AGTAAGAGGTAAGTAGCCATGACTGCCTATATGTGTTGAGACATAAGGTATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS-3UTR CAA 90 bp | ATATCTGCAAATTTTAATTTAGGGCTCAACATGTGGCCTTGCCATTTAAAAGAGGTGGCTCAGTTTCCTTaGTGTAAAGCAAGTGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: ISANFNLGLNMWPCHLKEVAQFP*CKASEL Trigger: AAGTTCACTTGCTTTACACAAAGGAAACTGAGCCAC...CTCTTTTAAATGGCAAGGCCACATGTTGAGCCCTAAATTAAAATTTGCAGATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354193.5 |
||
| CDS GCA 72 bp | CCACATCCCCCGGAATGTCCCACGCGTAACGCCCTCTaGGTGCGCCGGCGCCCTATGAAGATCCGGCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PHPPECPTRNAL*VRRRPMKIRRS Trigger: GCTGCGCCGGATCTTCATAGGGCGCCGGCGCACGCAGAGGGCGTTACGCGTGGGACATTCCGGGGGATGTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000533774.5 |
||
| CDS TCA 72 bp | TGGAGATCTACACGGAGGCGACGGCCTAGGTCGCTCTaGCAGGACCCAACGACCCTCCTGACGCGTCCACCC | + |
|
Preference number: 6 (lower is better) Translates to: WRSTRRRRPRSL*QDPTTLLTRPP Trigger: GGGTGGACGCGTCAGGAGGGTCGTTGGGTCCTGTCAGAGCGACCTAGGCCGTCGCCTCCGTGTAGATCTCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533774.5 |
||
| CDS CCA 72 bp | CCACAGCCGCCTTTCGACAACTTTTTGTTACAAAAGTaGAGATCTACACGGAGGCGACGGCCTAGGTCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PQPPFDNFLLQK*RSTRRRRPRSL Trigger: GAGCGACCTAGGCCGTCGCCTCCGTGTAGATCTCCACTTTTGTAACAAAAAGTTGTCGAAAGGCGGCTGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000533774.5 |
||
| CDS CAA 90 bp | TCAGTGGAAGGTAGAAAGACGCCACAGCCGCCTTTCGACAACTTTTaGTTACAAAAGTGGAGATCTACACGGAGGCGACGGCCTAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SVEGRKTPQPPFDNF*LQKWRSTRRRRPRS Trigger: CGACCTAGGCCGTCGCCTCCGTGTAGATCTCCACTTTTGTAACAAAAAGTTGTCGAAAGGCGGCTGTGGCGTCTTTCTACCTTCCACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533774.5 |
||
| CDS CAA 72 bp | GGTAGAAAGACGCCACAGCCGCCTTTCGACAACTTTTaGTTACAAAAGTGGAGATCTACACGGAGGCGACGG | + |
|
Preference number: 6 (lower is better) Translates to: GRKTPQPPFDNF*LQKWRSTRRRR Trigger: CCGTCGCCTCCGTGTAGATCTCCACTTTTGTAACAAAAAGTTGTCGAAAGGCGGCTGTGGCGTCTTTCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533774.5 |
||
| CDS GCA 72 bp | CCATTTCCTTTCCTTTTCCATCTTCTAGAGGCCACCTaGATTCCTAAGCTCCATGATTTCCTTCCTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: PFPFLFHLLEAT*IPKLHDFLPPS Trigger: AGATGGAGGAAGGAAATCATGGAGCTTAGGAATGCAGGTGGCCTCTAGAAGATGGAAAAGGAAAGGAAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525670.5 |
||
| CDS TCA 72 bp | TCCTCCATCTTCAAAATCAGCAATGTAGCATCTCTATaGCCCGTCTTCTTTCTTCACATCTCTTTCTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SSIFKISNVASL*PVFFLHISFSH Trigger: ATGAGAGAAAGAGATGTGAAGAAAGAAGACGGGTCATAGAGATGCTACATTGCTGATTTTGAAGATGGAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525670.5 |
||