RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SV2B (Homo sapiens)

Ensembl gene IDs: ENSG00000185518

Ensembl transcript IDs: ENST00000330276.4, ENST00000394232.6, ENST00000545111.6, ENST00000553727.1, ENST00000557291.1, ENST00000557410.5

Found 1066 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCTGATGTTCATCCGGCCTGGGCAGGTGCAAGTTCACCTCCGCTaGCAGTTGTGCGTAGCTCACTGTCCCCTCCATTGTCAGACAGTT +
Preference number: 1 (lower is better)
Translates to: RLMFIRPGQVQVHLR*QLCVAHCPLHCQTV
Trigger: AACTGTCTGACAATGGAGGGGACAGTGAGCTACGCACAACTGCCAGCGGAGGTGAACTTGCACCTGCCCAGGCCGGATGAACATCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 90 bp CTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTTTTCATaGCTCACAGCTTGTGGCCGTGTCCTCCGCTTAGCCATAGGACCA +
Preference number: 1 (lower is better)
Translates to: LANGSLCLSPAPSFS*LTACGRVLRLAIGP
Trigger: TGGTCCTATGGCTAAGCGGAGGACACGGCCACAAGCTGTGAGTCATGAAAAGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 90 bp AATGCTTCCATACCAGTTAGCAAAAGGCCACCACCCTCAGCCCTCTaGCAACCAGCATCACCACTCCAGAACCAGGTCCCTCCTCTGCAC +
Preference number: 1 (lower is better)
Translates to: NASIPVSKRPPPSAL*QPASPLQNQVPPLH
Trigger: GTGCAGAGGAGGGACCTGGTTCTGGAGTGGTGATGCTGGTTGTCAGAGGGCTGAGGGTGGTGGCCTTTTGCTAACTGGTATGGAAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394232.6
3UTR GCA 90 bp TTCATCCGGCCTGGGCAGGTGCAAGTTCACCTCCGCTGGCAGTTGTaGGTAGCTCACTGTCCCCTCCATTGTCAGACAGTTCTGATGTTT +
Preference number: 1 (lower is better)
Translates to: FIRPGQVQVHLRWQL*VAHCPLHCQTVLMF
Trigger: AAACATCAGAACTGTCTGACAATGGAGGGGACAGTGAGCTACGCACAACTGCCAGCGGAGGTGAACTTGCACCTGCCCAGGCCGGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 90 bp ACTGGCCTGACTTTCAGGGAAGAACAGGAAATAGTCACCCACATCTaGGTACTCTCACCTCTCCCCAAAACCGGCACCTGTCTAGGCCAC +
Preference number: 1 (lower is better)
Translates to: TGLTFREEQEIVTHI*VLSPLPKTGTCLGH
Trigger: GTGGCCTAGACAGGTGCCGGTTTTGGGGAGAGGTGAGAGTACCCAGATGTGGGTGACTATTTCCTGTTCTTCCCTGAAAGTCAGGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 90 bp CCTTTGCCTATCACCTGCACCCTCCTTTTCATGACTCACAGCTTGTaGCCGTGTCCTCCGCTTAGCCATAGGACCACAGGACTGGTCAAT +
Preference number: 1 (lower is better)
Translates to: PLPITCTLLFMTHSL*PCPPLSHRTTGLVN
Trigger: ATTGACCAGTCCTGTGGTCCTATGGCTAAGCGGAGGACACGGCCACAAGCTGTGAGTCATGAAAAGGAGGGTGCAGGTGATAGGCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 90 bp CCGTGCTATCCAAGGTGTCCTCCGGACCGTGATAGGCAGGAAGTGTaGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTCCT +
Preference number: 1 (lower is better)
Translates to: PCYPRCPPDRDRQEV*MHFSVLDKILSTFP
Trigger: AGGAAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGGAGGACACCTTGGATAGCACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR TCA 90 bp ATTGAGAGCACTGCAAATCAACTCAAACAACTAGTTCTTGCAGGCTaGTGTTCATCCGGCCTGGGCAGGTGCAAGTTCACCTCCGCTGGC +
Preference number: 1 (lower is better)
Translates to: IESTANQLKQLVLAG*CSSGLGRCKFTSAG
Trigger: GCCAGCGGAGGTGAACTTGCACCTGCCCAGGCCGGATGAACATCAGCCTGCAAGAACTAGTTGTTTGAGTTGATTTGCAGTGCTCTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 90 bp CACATTGTCCCATTCCCCAAACTGCAGGCTTCCCCAGAACTGTCATaGGAGCATCACCTTAGGCCTTCTCGCCCACTCCTCACATTACAT +
Preference number: 1 (lower is better)
Translates to: HIVPFPKLQASPELS*EHHLRPSRPLLTLH
Trigger: ATGTAATGTGAGGAGTGGGCGAGAAGGCCTAAGGTGATGCTCTCATGACAGTTCTGGGGAAGCCTGCAGTTTGGGGAATGGGACAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 90 bp TCCTGCAAAAGTCTGCAGAGCTTGGCTGCACCCTTTACAAAGACCTaGGTGATGGATGAGATGGGAATTGCCCTTGATTGGCTAGGTGGC +
Preference number: 1 (lower is better)
Translates to: SCKSLQSLAAPFTKT*VMDEMGIALDWLGG
Trigger: GCCACCTAGCCAATCAAGGGCAATTCCCATCTCATCCATCACTCAGGTCTTTGTAAAGGGTGCAGCCAAGCTCTGCAGACTTTTGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR GCA 90 bp GCTATCCAAGGTGTCCTCCGGACCGTGATAGGCAGGAAGTGTGGATaGATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTCCTTTTC +
Preference number: 1 (lower is better)
Translates to: AIQGVLRTVIGRKCG*ISVSWTRFSRPFLF
Trigger: GAAAAGGAAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGGAGGACACCTTGGATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR GCA 90 bp CTCAGGGAATGGCGAGTATTTGTCACATTGTCCCATTCCCCAAACTaGAGGCTTCCCCAGAACTGTCATGAGAGCATCACCTTAGGCCTT +
Preference number: 1 (lower is better)
Translates to: LREWRVFVTLSHSPN*RLPQNCHESITLGL
Trigger: AAGGCCTAAGGTGATGCTCTCATGACAGTTCTGGGGAAGCCTGCAGTTTGGGGAATGGGACAATGTGACAAATACTCGCCATTCCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 90 bp ACCTATCCTTTCTGGCTTTTGTCCTTCGAGCCAAGACCCTCAATTTaGAGGAGGGGCAGCAATGTTCCCAGTAAATACCGCATTTCCCTG +
Preference number: 1 (lower is better)
Translates to: TYPFWLLSFEPRPSI*RRGSNVPSKYRISL
Trigger: CAGGGAAATGCGGTATTTACTGGGAACATTGCTGCCCCTCCTCCAAATTGAGGGTCTTGGCTCGAAGGACAAAAGCCAGAAAGGATAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 90 bp TCTGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTaGGTTACAAACATATTGACAGCTGAAGTGGGTCCTAAACTAGGG +
Preference number: 1 (lower is better)
Translates to: SVILRVAQGTPKSVT*VTNILTAEVGPKLG
Trigger: CCCTAGTTTAGGACCCACTTCAGCTGTCAATATGTTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR GCA 90 bp CTACACTTCCCCATCCTTCCCTCAGTCCCCATGTTGTTTGATTCTTaGCTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGT +
Preference number: 1 (lower is better)
Translates to: LHFPILPSVPMLFDS*LQRVPEATEHISHC
Trigger: ACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAGAATCAAACAACATGGGGACTGAGGGAAGGATGGGGAAGTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 90 bp AATTGTGGATGTGAGGTTCAGTGCTTCAACAGCCATCTCAGCCCATaGGGCAGCCTCAGTGATGGAAACTGCACTAAAAATCAAGGAGTC +
Preference number: 1 (lower is better)
Translates to: NCGCEVQCFNSHLSP*GSLSDGNCTKNQGV
Trigger: GACTCCTTGATTTTTAGTGCAGTTTCCATCACTGAGGCTGCCTCATGGGCTGAGATGGCTGTTGAAGCACTGAACCTCACATCCACAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 90 bp CATCACCTTAGGCCTTCTCGCCCACTCCTCACATTACATGTAATCTaGGCCACATCGTTTAACCTCTCAAGGTCCCCATGTTGCAAAATA +
Preference number: 1 (lower is better)
Translates to: HHLRPSRPLLTLHVI*ATSFNLSRSPCCKI
Trigger: TATTTTGCAACATGGGGACCTTGAGAGGTTAAACGATGTGGCCCAGATTACATGTAATGTGAGGAGTGGGCGAGAAGGCCTAAGGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 90 bp CTGCAGCAGATGACCCTGGCTTCTTTTGGAAGAGGTTTGGTGGGGTaGTTATACCATACTATATGCCAGGTGATGAGCATTCAGAACTTG +
Preference number: 1 (lower is better)
Translates to: LQQMTLASFGRGLVG*LYHTICQVMSIQNL
Trigger: CAAGTTCTGAATGCTCATCACCTGGCATATAGTATGGTATAATCACCCCACCAAACCTCTTCCAAAAGAAGCCAGGGTCATCTGCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394232.6
3UTR TCA 90 bp GGAGGGAACGCTGGGTTGGGGTTTACTTGTTACATGACCTCAGGATaGTGTACTACAAACTTCACAGATAGGCACACCTCTTTCACTAAT +
Preference number: 1 (lower is better)
Translates to: GGNAGLGFTCYMTSG*CTTNFTDRHTSFTN
Trigger: ATTAGTGAAAGAGGTGTGCCTATCTGTGAAGTTTGTAGTACATCATCCTGAGGTCATGTAACAAGTAAACCCCAACCCAGCGTTCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 90 bp GGAGCGTGGTGTTGTAGCGGACATTACTACTCAACAGCTCACCTCTaGAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGATA +
Preference number: 1 (lower is better)
Translates to: GAWCCSGHYYSTAHL*KGRRGIPSSQRIKI
Trigger: TATCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTGTTGAGTAGTAATGTCCGCTACAACACCACGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 90 bp GCTTCCTCTCATTATAGTAAAGCCATCAAGGGAATAGTCAATGAATaGTCTCAGGGAATGGCGAGTATTTGTCACATTGTCCCATTCCCC +
Preference number: 1 (lower is better)
Translates to: ASSHYSKAIKGIVNE*SQGMASICHIVPFP
Trigger: GGGGAATGGGACAATGTGACAAATACTCGCCATTCCCTGAGACCATTCATTGACTATTCCCTTGATGGCTTTACTATAATGAGAGGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 90 bp TGGTCCCAAACATTTGGGATAAGGAATACTCAGTCTGTAGCTATTTaGCCTTTGACAAGTGACTTTCCTGTGTTCCAGTTTCCCCACTTC +
Preference number: 1 (lower is better)
Translates to: WSQTFGIRNTQSVAI*PLTSDFPVFQFPHF
Trigger: GAAGTGGGGAAACTGGAACACAGGAAAGTCACTTGTCAAAGGCCAAATAGCTACAGACTGAGTATTCCTTATCCCAAATGTTTGGGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394232.6
3UTR TCA 90 bp CTTCAAGCCCAATCTTCATATAATGACTCTAACTTCCAGCCAAGTTaGTTTGTTAAGTTGTTGGGCTCCAAGGAGCTTTCTGGAGGAACC +
Preference number: 1 (lower is better)
Translates to: LQAQSSYNDSNFQPS*FVKLLGSKELSGGT
Trigger: GGTTCCTCCAGAAAGCTCCTTGGAGCCCAACAACTTAACAAATCAACTTGGCTGGAAGTTAGAGTCATTATATGAAGATTGGGCTTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR GCA 90 bp CTCTATGTGATTTATTTCCAAACGGTTCTTAGAGCTGGGCCTAAATaGGACACAGCTACATGCAAAAGCACAATGTTTTGGACAGGGTCA +
Preference number: 1 (lower is better)
Translates to: LYVIYFQTVLRAGPK*DTATCKSTMFWTGS
Trigger: TGACCCTGTCCAAAACATTGTGCTTTTGCATGTAGCTGTGTCGCATTTAGGCCCAGCTCTAAGAACCGTTTGGAAATAAATCACATAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 90 bp GGGAGAGAAGTAACTACTCACTACACCTGCACAAAGAAAAGTGCCTaGATTAAGCAGACTGCACAATGTGAGTTTGTTAATTCATCCTCC +
Preference number: 1 (lower is better)
Translates to: GREVTTHYTCTKKSA*IKQTAQCEFVNSSS
Trigger: GGAGGATGAATTAACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGTGTAGTGAGTAGTTACTTCTCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR GCA 90 bp AACTTCCCTGACAAGTCAAAGTACCACCTATTGGAAGAGTGTCAGTaGTACTCAAAATATGGCTTGAGAATTGATGCCATCTATGTCACC +
Preference number: 1 (lower is better)
Translates to: NFPDKSKYHLLEECQ*YSKYGLRIDAIYVT
Trigger: GGTGACATAGATGGCATCAATTCTCAAGCCATATTTTGAGTAGCACTGACACTCTTCCAATAGGTGGTACTTTGACTTGTCAGGGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR GCA 90 bp CAGTCTGTTTCATTTCATCATTCATCTTTTTGGAAATCTCGCTGCTaGCACAACAGCCATGCATATAAATTCCTCACCATGCCTCTGCAA +
Preference number: 1 (lower is better)
Translates to: QSVSFHHSSFWKSRC*HNSHAYKFLTMPLQ
Trigger: TTGCAGAGGCATGGTGAGGAATTTATATGCATGGCTGTTGTGGCAGCAGCGAGATTTCCAAAAAGATGAATGATGAAATGAAACAGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR GCA 90 bp CTTCAGTCTGTTTCATTTCATCATTCATCTTTTTGGAAATCTCGCTaGTGCCACAACAGCCATGCATATAAATTCCTCACCATGCCTCTG +
Preference number: 1 (lower is better)
Translates to: LQSVSFHHSSFWKSR*CHNSHAYKFLTMPL
Trigger: CAGAGGCATGGTGAGGAATTTATATGCATGGCTGTTGTGGCAGCAGCGAGATTTCCAAAAAGATGAATGATGAAATGAAACAGACTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 90 bp GTTTATGTTCAAAGCTGGACTTCAGGAAACAGTTCTCTTAAGCACTaGAGAAAAACATATTTGGCATCCACTACACTCCCTAACTCCCAC +
Preference number: 1 (lower is better)
Translates to: VYVQSWTSGNSSLKH*RKTYLASTTLPNSH
Trigger: GTGGGAGTTAGGGAGTGTAGTGGATGCCAAATATGTTTTTCTTCAGTGCTTAAGAGAACTGTTTCCTGAAGTCCAGCTTTGAACATAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 90 bp AGACCTCATTTCCTGGGACCTCAAACACCAAGTTCTCCCAAAATATaGCTAAAATGCTGGCAATATTTGCAGATACCAGTTGTGGAAATT +
Preference number: 1 (lower is better)
Translates to: RPHFLGPQTPSSPKI*LKCWQYLQIPVVEI
Trigger: AATTTCCACAACTGGTATCTGCAAATATTGCCAGCATTTTAGCCATATTTTGGGAGAACTTGGTGTTTGAGGTCCCAGGAAATGAGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 90 bp AACAGAAAGTTAAATGGCTGTAAGAAATTGTGCTTGCATTTCATTTaGTCAGACCTCATTTCCTGGGACCTCAAACACCAAGTTCTCCCA +
Preference number: 1 (lower is better)
Translates to: NRKLNGCKKLCLHFI*SDLISWDLKHQVLP
Trigger: TGGGAGAACTTGGTGTTTGAGGTCCCAGGAAATGAGGTCTGATCAAATGAAATGCAAGCACAATTTCTTACAGCCATTTAACTTTCTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR GCA 90 bp GGAAAGCCTAGGAGACATAGGAGAAAAGTAGATCTCTATAGATGTTaGTCAAATACTTGGCTTTCTAGATCAGAGTATCCTCAATGCTAC +
Preference number: 1 (lower is better)
Translates to: GKPRRHRRKVDLYRC*SNTWLSRSEYPQCY
Trigger: GTAGCATTGAGGATACTCTGATCTAGAAAGCCAAGTATTTGAGCAACATCTATAGAGATCTACTTTTCTCCTATGTCTCCTAGGCTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR GCA 90 bp TTCCTGGGACCTCAAACACCAAGTTCTCCCAAAATATGGCTAAAATaGTGGCAATATTTGCAGATACCAGTTGTGGAAATTAAACCCAAA +
Preference number: 1 (lower is better)
Translates to: FLGPQTPSSPKIWLK*WQYLQIPVVEIKPK
Trigger: TTTGGGTTTAATTTCCACAACTGGTATCTGCAAATATTGCCAGCATTTTAGCCATATTTTGGGAGAACTTGGTGTTTGAGGTCCCAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 90 bp TTATTATTTAGTTTTAATGAACTAACACAACGTAGGAGGGAACGCTaGGTTGGGGTTTACTTGTTACATGACCTCAGGATGATGTACTAC +
Preference number: 1 (lower is better)
Translates to: LLFSFNELTQRRRER*VGVYLLHDLRMMYY
Trigger: GTAGTACATCATCCTGAGGTCATGTAACAAGTAAACCCCAACCCAGCGTTCCCTCCTACGTTGTGTTAGTTCATTAAAACTAAATAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 90 bp AACTATTTCCAAGCTGGGCATCATAAAATACATCATCAAGAACTGTaGACAGATTTGCTAAACAAAGGAAAGCCTCATCCCTTTAACCCT +
Preference number: 1 (lower is better)
Translates to: NYFQAGHHKIHHQEL*TDLLNKGKPHPFNP
Trigger: AGGGTTAAAGGGATGAGGCTTTCCTTTGTTTAGCAAATCTGTTCACAGTTCTTGATGATGTATTTTATGATGCCCAGCTTGGAAATAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR TCA 90 bp AAGACACACAGTAGCCATTCTGCATTCTGTAAATTTGTTTTCGAATaGGATCTATGTAGAGAAATTTGCTCCACTCTGTCTTCCTTGTCT +
Preference number: 1 (lower is better)
Translates to: KTHSSHSAFCKFVFE*DLCREICSTLSSLS
Trigger: AGACAAGGAAGACAGAGTGGAGCAAATTTCTCTACATAGATCTCATTCGAAAACAAATTTACAGAATGCAGAATGGCTACTGTGTGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 90 bp GTAAGCATCTATATATTTAAGGATACCTACCAAATATCCTCGTCCTaGGACACTTGTTATAACTCAGCAATGCACTCTACCAATGTTCTG +
Preference number: 1 (lower is better)
Translates to: VSIYIFKDTYQISSS*DTCYNSAMHSTNVL
Trigger: CAGAACATTGGTAGAGTGCATTGCTGAGTTATAACAAGTGTCTCAGGACGAGGATATTTGGTAGGTATCCTTAAATATATAGATGCTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 90 bp GATCAAAAATCAGCATCAGGAGATGACACAATACAGTTGAGACTATaGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATC +
Preference number: 1 (lower is better)
Translates to: DQKSASGDDTIQLRL*KATISKLGIIKYII
Trigger: GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAACTGTATTGTGTCATCTCCTGATGCTGATTTTTGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR TCA 90 bp CTTCCAAAGAAACATCTTCCTCCACTGGCTACATGTCAGCACATTTaGACCAACAGTATTACAAATGCCTTCTATACCTATGAAATATTT +
Preference number: 1 (lower is better)
Translates to: LPKKHLPPLATCQHI*TNSITNAFYTYEIF
Trigger: AAATATTTCATAGGTATAGAAGGCATTTGTAATACTGTTGGTTCAAATGTGCTGACATGTAGCCAGTGGAGGAAGATGTTTCTTTGGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR GCA 90 bp AGATGTTGCTCAAATACTTGGCTTTCTAGATCAGAGTATCCTCAATaGTACTATGTCAATTTTCGAGTGGAAAATATGATAGGTGATACT +
Preference number: 1 (lower is better)
Translates to: RCCSNTWLSRSEYPQ*YYVNFRVENMIGDT
Trigger: AGTATCACCTATCATATTTTCCACTCGAAAATTGACATAGTAGCATTGAGGATACTCTGATCTAGAAAGCCAAGTATTTGAGCAACATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR CAA 90 bp ATGTTCATCCGGCCTGGGCAGGTGCAAGTTCACCTCCGCTGGCAGTaGTGCGTAGCTCACTGTCCCCTCCATTGTCAGACAGTTCTGATG +
Preference number: 2 (lower is better)
Translates to: MFIRPGQVQVHLRWQ*CVAHCPLHCQTVLM
Trigger: CATCAGAACTGTCTGACAATGGAGGGGACAGTGAGCTACGCACAACTGCCAGCGGAGGTGAACTTGCACCTGCCCAGGCCGGATGAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CAA 90 bp GTCCCTTTGCCTATCACCTGCACCCTCCTTTTCATGACTCACAGCTaGTGGCCGTGTCCTCCGCTTAGCCATAGGACCACAGGACTGGTC +
Preference number: 2 (lower is better)
Translates to: VPLPITCTLLFMTHS*WPCPPLSHRTTGLV
Trigger: GACCAGTCCTGTGGTCCTATGGCTAAGCGGAGGACACGGCCACAAGCTGTGAGTCATGAAAAGGAGGGTGCAGGTGATAGGCAAAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR GCA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATCTCCGCTGGCAGTTGTaGGTAGCTCACTGTCCCCTC +
Preference number: 2 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYLRWQL*VAHCPL
Trigger: GAGGGGACAGTGAGCTACGCACAACTGCCAGCGGAG...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATCTAGTTCTTGCAGGCTaGTGTTCATCCGGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYLVLAG*CSSGLG
Trigger: GCCCAGGCCGGATGAACATCAGCCTGCAAGAACTAG...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR GCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCAACTTCTCCTCCCGTaGTATCCAAGGTGTCCTCCG +
Preference number: 2 (lower is better)
Translates to: EMLAPRIVCALTGESSPCQLLLP*YPRCPP
Trigger: CGGAGGACACCTTGGATAGCACGGGAGGAGAAGTTG...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR TCA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTAGGAGTGTGCTCCCATaGTCAAAGGCAGCCACTCCA +
Preference number: 2 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPRSVLP*SKAATP
Trigger: TGGAGTGGCTGCCTTTGATCATGGGAGCACACTCCT...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CCA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTCAAGTTCACCTCCGCTaGCAGTTGTGCGTAGCTCAC +
Preference number: 2 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPQVHLR*QLCVAH
Trigger: GTGAGCTACGCACAACTGCCAGCGGAGGTGAACTTG...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CCA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATCTCCAAGGAGCTTTCTaGAGGAACCTGGGTGTTTCT +
Preference number: 2 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYLQGAF*RNLGVS
Trigger: AGAAACACCCAGGTTCCTCCAGAAAGCTCCTTGGAG...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR TCA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATCCCTTTACAAAGACCTaGGTGATGGATGAGATGGGA +
Preference number: 2 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYPFTKT*VMDEMG
Trigger: TCCCATCTCATCCATCACTCAGGTCTTTGTAAAGGG...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR TCA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTAATGGCTCATCCTCCTaGGTGACAGTAGCTGTGATT +
Preference number: 2 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPNGSSS*VTVAVI
Trigger: AATCACAGCTACTGTCACTCAGGAGGATGAGCCATT...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR GCA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTTGTTTGATTCTTGCCTaGAAAGAGTACCAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPCLILA*KEYQRP
Trigger: TGGCCTCTGGTACTCTTTGCAGGCAAGAATCAAACA...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACAGCCATCTCAGCCCATaGGGCAGCCTCAGTGATGGA +
Preference number: 2 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHSHLSP*GSLSDG
Trigger: TCCATCACTGAGGCTGCCTCATGGGCTGAGATGGCT...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR GCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCTCCGGCCTGGGCAGGTaGAAGTTCACCTCCGCTGGC +
Preference number: 2 (lower is better)
Translates to: LRLWKATISKLGIIKYIISGLGR*KFTSAG
Trigger: GCCAGCGGAGGTGAACTTGCACCTGCCCAGGCCGGA...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CCA 90 bp CTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGTAGTGAGTGTGTGCACTCACTaGAGAATCCTCTCCCTGCCT +
Preference number: 2 (lower is better)
Translates to: LQRVPEATEHISHCFWVVSVCTH*RILSLP
Trigger: AGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACT...CACTACCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGTCAGACCTCATTTCCTaGGACCTCAAACACCAAGTT +
Preference number: 2 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWSDLIS*DLKHQV
Trigger: AACTTGGTGTTTGAGGTCCCAGGAAATGAGGTCTGA...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CCA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTAATGGTCTCAGGGAATaGCGAGTATTTGTCACATTG +
Preference number: 2 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPNGLRE*RVFVTL
Trigger: CAATGTGACAAATACTCGCCATTCCCTGAGACCATT...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGTGCTTGCATTTCATTTaGTCAGACCTCATTTCCTGG +
Preference number: 2 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWCLHFI*SDLISW
Trigger: CCAGGAAATGAGGTCTGATCAAATGAAATGCAAGCA...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGACATCTAGTCATGTCTTaGTCACCCCCGTGCATCCCT +
Preference number: 2 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRHLVMS*SPPCIP
Trigger: AGGGATGCACGGGGGTGATCAAGACATGACTAGATG...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR GCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATGGCAGGAAGTGTGGATaGATTTCAGTGTCCTGGACA +
Preference number: 2 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNGRKCG*ISVSWT
Trigger: TGTCCAGGACACTGAAATGCATCCACACTTCCTGCC...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR GCA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACCAACTTCTCCTCCCGTaGTATCCAAGGTGTCCTCCG +
Preference number: 2 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHQLLLP*YPRCPP
Trigger: CGGAGGACACCTTGGATAGCACGGGAGGAGAAGTTG...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR GCA 90 bp ACTTCCCTGACAAGTCAAAGTACCACCTATTGGAAGAGTGTCAGTGCTACTCAACACCAATGTCCCTCTTaGATTCCTGGCCCCTATCTC +
Preference number: 2 (lower is better)
Translates to: TSLTSQSTTYWKSVSATQHQCPS*IPGPYL
Trigger: GAGATAGGGGCCAGGAATGCAAGAGGGACATTGGTG...TTGAGTAGCACTGACACTCTTCCAATAGGTGGTACTTTGACTTGTCAGGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CCA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATACAAAGAAAAGTGCCTaGATTAAGCAGACTGCACAA +
Preference number: 2 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYTKKSA*IKQTAQ
Trigger: TTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGT...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGATACATTGTCCCCCAGTaGCCTGCCACAGAGACTATT +
Preference number: 2 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRYIVPQ*PATETI
Trigger: AATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTA...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTGGTTTACTTGTTACATaGCCTCAGGATGATGTACTA +
Preference number: 2 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPGLLVT*PQDDVL
Trigger: TAGTACATCATCCTGAGGTCATGTAACAAGTAAACC...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CCA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGACTCCCTGCCTTGGACTaGGAAGACTTGAAGTTAAAC +
Preference number: 2 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRLPALD*EDLKLN
Trigger: GTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAG...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR CCA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTGATTTGTTAAGTTGTTaGGCTCCAAGGAGCTTTCTG +
Preference number: 2 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFDLLSC*APRSFL
Trigger: CAGAAAGCTCCTTGGAGCCCAACAACTTAACAAATC...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR CCA 90 bp ACAATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGTGTCCCCAGGGCTTaGCAGAGAGACTGGCCCATG +
Preference number: 2 (lower is better)
Translates to: TMNYRMPQAYLSMKIFTRCVPRA*QRDWPM
Trigger: CATGGGCCAGTCTCTCTGCCAAGCCCTGGGGACACA...CCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp CTTGCCTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGGAGTTACAAACATATTaGCAGCTGAAGTGGGTCCTA +
Preference number: 2 (lower is better)
Translates to: LACKEYQRPLNTSHIVFGELQTY*QLKWVL
Trigger: TAGGACCCACTTCAGCTGTCAATATGTTTGTAACTC...CCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTGAGTTACAAACATATTaGCAGCTGAAGTGGGTCCTA +
Preference number: 2 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRAELQTY*QLKWVL
Trigger: TAGGACCCACTTCAGCTGTCAATATGTTTGTAACTC...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR TCA 90 bp CTTGCCTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGTGCTTGCATTTCATTTaGTCAGACCTCATTTCCTGG +
Preference number: 2 (lower is better)
Translates to: LACKEYQRPLNTSHIVFGCLHFI*SDLISW
Trigger: CCAGGAAATGAGGTCTGATCAAATGAAATGCAAGCA...CCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGACAAGGGAATAGTCAATaGATGGTCTCAGGGAATGGC +
Preference number: 2 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRQGNSQ*MVSGNG
Trigger: GCCATTCCCTGAGACCATTCATTGACTATTCCCTTG...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp ACAATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGAGCCATCTCAGCCCATaGGGCAGCCTCAGTGATGGA +
Preference number: 2 (lower is better)
Translates to: TMNYRMPQAYLSMKIFTRSHLSP*GSLSDG
Trigger: TCCATCACTGAGGCTGCCTCATGGGCTGAGATGGCT...CCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGACATAAGGACAGGACCTaGGTGAAACCAAGCAGTTTC +
Preference number: 2 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRHKDRT*VKPSSF
Trigger: GAAACTGCTTGGTTTCACTCAGGTCCTGTCCTTATG...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR GCA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTGGCAGGAAGTGTGGATaGATTTCAGTGTCCTGGACA +
Preference number: 2 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVGRKCG*ISVSWT
Trigger: TGTCCAGGACACTGAAATGCATCCACACTTCCTGCC...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR GCA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGAAGAGCTGGGCCTAAATaGGACACAGCTACATGCAAA +
Preference number: 2 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRRAGPK*DTATCK
Trigger: TTTGCATGTAGCTGTGTCGCATTTAGGCCCAGCTCT...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CCA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGCAAGTTCACCTCCGCTaGCAGTTGTGCGTAGCTCAC +
Preference number: 2 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWQVHLR*QLCVAH
Trigger: GTGAGCTACGCACAACTGCCAGCGGAGGTGAACTTG...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CCA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAAGCTTGGCAGAGAGACTaGCCCATGGTCAGGGCTCAA +
Preference number: 2 (lower is better)
Translates to: LGVYGICFAVLLEECFNKAWQRD*PMVRAQ
Trigger: TTGAGCCCTGACCATGGGCCAGTCTCTCTGCCAAGC...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CCA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTTGCACACACTATGGATaGTTTGTTTTCTACTTTTAC +
Preference number: 2 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPCTHYG*FVFYFY
Trigger: GTAAAAGTAGAAAACAAACCATCCATAGTGTGTGCA...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CAA 90 bp AAGCCCAATCTTCATATAATGACTCTAACTTCCAGCCAAGTTGATTaGTTAAGTTGTTGGGCTCCAAGGAGCTTTCTGGAGGAACCTGGG +
Preference number: 2 (lower is better)
Translates to: KPNLHIMTLTSSQVD*LSCWAPRSFLEEPG
Trigger: CCCAGGTTCCTCCAGAAAGCTCCTTGGAGCCCAACAACTTAACAAATCAACTTGGCTGGAAGTTAGAGTCATTATATGAAGATTGGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR TCA 90 bp CTTGCCTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGCCCAAATCAGTCACCTaGGTTACAAACATATTGACA +
Preference number: 2 (lower is better)
Translates to: LACKEYQRPLNTSHIVFGPKSVT*VTNILT
Trigger: TGTCAATATGTTTGTAACTCAGGTGACTGATTTGGG...CCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATAACTTCCAGCCAAGTTaGTTTGTTAAGTTGTTGGGC +
Preference number: 2 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNNFQPS*FVKLLG
Trigger: GCCCAACAACTTAACAAATCAACTTGGCTGGAAGTT...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR TCA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGAGCAATAGAACTTCCCTaGCAAGTCAAAGTACCACCT +
Preference number: 2 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRAIELP*QVKVPP
Trigger: AGGTGGTACTTTGACTTGTCAGGGAAGTTCTATTGC...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR GCA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGTCCCATTCCCCAAACTaGAGGCTTCCCCAGAACTGT +
Preference number: 2 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWSHSPN*RLPQNC
Trigger: ACAGTTCTGGGGAAGCCTGCAGTTTGGGGAATGGGA...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CCA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGATTTGTTAAGTTGTTaGGCTCCAAGGAGCTTTCTG +
Preference number: 2 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRDLLSC*APRSFL
Trigger: CAGAAAGCTCCTTGGAGCCCAACAACTTAACAAATC...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR CCA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTAGTTCTCCCAAAATATaGCTAAAATGCTGGCAATAT +
Preference number: 2 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPSSPKI*LKCWQY
Trigger: ATATTGCCAGCATTTTAGCCATATTTTGGGAGAACT...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CCA 90 bp ACTTCCCTGACAAGTCAAAGTACCACCTATTGGAAGAGTGTCAGTGCTACTCAAAAAGTCTGCAGAGCTTaGCTGCACCCTTTACAAAGA +
Preference number: 2 (lower is better)
Translates to: TSLTSQSTTYWKSVSATQKVCRA*LHPLQR
Trigger: TCTTTGTAAAGGGTGCAGCCAAGCTCTGCAGACTTT...TTGAGTAGCACTGACACTCTTCCAATAGGTGGTACTTTGACTTGTCAGGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CCA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTTTTTTGGTGGCGAATTaGAAAGCTATTTTTATAGGC +
Preference number: 2 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPFLVAN*KAIFIG
Trigger: GCCTATAAAAATAGCTTTCCAATTCGCCACCAAAAA...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CAA 90 bp TGTGACATGGGACTGGGAAACGTAATGACTCTTAATTATCTCAGGTaGAAGGTGCGTTACAGAAAGATGGCAGGCTTCCAAAGAAACATC +
Preference number: 2 (lower is better)
Translates to: CDMGLGNVMTLNYLR*KVRYRKMAGFQRNI
Trigger: GATGTTTCTTTGGAAGCCTGCCATCTTTCTGTAACGCACCTTCAACCTGAGATAATTAAGAGTCATTACGTTTCCCAGTCCCATGTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGATTAAGTCCTTGCACTTaGCTTAGAGAAATGCTTGCT +
Preference number: 2 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRLSPCT*LREMLA
Trigger: AGCAAGCATTTCTCTAAGTCAAGTGCAAGGACTTAA...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR GCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCGGAGAATCCTCTCCCTaGCTTGGACTGGGAAGACTT +
Preference number: 2 (lower is better)
Translates to: LRLWKATISKLGIIKYIIGESSP*LGLGRL
Trigger: AAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR GCA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTAATGCTGGCAATATTTaGAGATACCAGTTGTGGAAA +
Preference number: 2 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRANAGNI*RYQLWK
Trigger: TTTCCACAACTGGTATCTGCAAATATTGCCAGCATT...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGCTCCAAGGAGCTTTCTaGAGGAACCTGGGTGTTTCT +
Preference number: 2 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWLQGAF*RNLGVS
Trigger: AGAAACACCCAGGTTCCTCCAGAAAGCTCCTTGGAG...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR CCA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACTCAGACCTCATTTCCTaGGACCTCAAACACCAAGTT +
Preference number: 2 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHSDLIS*DLKHQV
Trigger: AACTTGGTGTTTGAGGTCCCAGGAAATGAGGTCTGA...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CCA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAACTGCCAGGGAAAATGTaGCACTTGCCCATTGAGAGC +
Preference number: 2 (lower is better)
Translates to: LGVYGICFAVLLEECFNKLPGKM*HLPIES
Trigger: GCTCTCAATGGGCAAGTGCCACATTTTCCCTGGCAG...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CCA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGCCAAGACCCTCAATTTaGAGGAGGGGCAGCAATGTT +
Preference number: 2 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWPRPSI*RRGSNV
Trigger: AACATTGCTGCCCCTCCTCCAAATTGAGGGTCTTGG...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACGAGTTACAAACATATTaGCAGCTGAAGTGGGTCCTA +
Preference number: 2 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHELQTY*QLKWVL
Trigger: TAGGACCCACTTCAGCTGTCAATATGTTTGTAACTC...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGAGCATTTCTCCAATACTaGGAAAACACTCGATATAGC +
Preference number: 2 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRAFLQY*ENTRYS
Trigger: GCTATATCGAGTGTTTTCTCAGTATTGGAGAAATGC...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGCATAAGGACAGGACCTaGGTGAAACCAAGCAGTTTC +
Preference number: 2 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWHKDRT*VKPSSF
Trigger: GAAACTGCTTGGTTTCACTCAGGTCCTGTCCTTATG...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR GCA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAATCCTCGCATAGTGTGTaGACTCACTGGAGAATCCTC +
Preference number: 2 (lower is better)
Translates to: LGVYGICFAVLLEECFNKSSHSV*THWRIL
Trigger: GAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR GCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCAATCCTGCAAAAGTCTaGAGAGCTTGGCTGCACCCT +
Preference number: 2 (lower is better)
Translates to: LRLWKATISKLGIIKYIINPAKV*RAWLHP
Trigger: AGGGTGCAGCCAAGCTCTGCAGACTTTTGCAGGATT...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR GCA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACTTAAGAGCCCTTCCCTaGACCTTAATCTCTTTCATC +
Preference number: 2 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHLRALP*TLISFI
Trigger: GATGAAAGAGATTAAGGTGCAGGGAAGGGCTCTTAA...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCCTCCAAGGAGCTTTCTaGAGGAACCTGGGTGTTTCT +
Preference number: 2 (lower is better)
Translates to: LRLWKATISKLGIIKYIILQGAF*RNLGVS
Trigger: AGAAACACCCAGGTTCCTCCAGAAAGCTCCTTGGAG...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR TCA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTTTAAGTCCTTGCACTTaGCTTAGAGAAATGCTTGCT +
Preference number: 2 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVLSPCT*LREMLA
Trigger: AGCAAGCATTTCTCTAAGTCAAGTGCAAGGACTTAA...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGGAACCTGGGTGTTTCTaGCCCTCTAATTCCTTTTCA +
Preference number: 2 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWEPGCF*PSNSFS
Trigger: TGAAAAGGAATTAGAGGGTCAGAAACACCCAGGTTC...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR GCA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAAAAATACTTCAAGCCCTaGAACCAGACACAGGCCCAT +
Preference number: 2 (lower is better)
Translates to: LGVYGICFAVLLEECFNKKYFKP*NQTQAH
Trigger: ATGGGCCTGTGTCTGGTTGCAGGGCTTGAAGTATTT...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATTGTTGCTCAAATACTTaGCTTTCTAGATCAGAGTAT +
Preference number: 2 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNCCSNT*LSRSEY
Trigger: ATACTCTGATCTAGAAAGCCAAGTATTTGAGCAACA...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR CCA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCCATTTGGAAGAACTGTaGCTACACTTCCCCATCCTT +
Preference number: 2 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLAHLEEL*LHFPIL
Trigger: AAGGATGGGGAAGTGTAGCCACAGTTCTTCCAAATG...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCAACTTCCAGCCAAGTTaGTTTGTTAAGTTGTTGGGC +
Preference number: 2 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLANFQPS*FVKLLG
Trigger: GCCCAACAACTTAACAAATCAACTTGGCTGGAAGTT...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR TCA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAAAGTACCAGAGGCCACTaGACACATCTCACATTGTTT +
Preference number: 2 (lower is better)
Translates to: LGVYGICFAVLLEECFNKSTRGH*THLTLF
Trigger: AAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACT...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGTTACAAAGACCTGAGTaGTGGATGAGATGGGAATTG +
Preference number: 2 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWLQRPE*WMRWEL
Trigger: CAATTCCCATCTCATCCATCACTCAGGTCTTTGTAA...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCTTATCTCAGCAGGAGTaGCGGCATTTAAGAAGTAGC +
Preference number: 2 (lower is better)
Translates to: LRLWKATISKLGIIKYIILSQQE*RHLRSS
Trigger: GCTACTTCTTAAATGCCGTCACTCCTGCTGAGATAA...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR TCA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGCAATCCTTTTACACATaGAAGGTGCAGTTTGCGGAT +
Preference number: 2 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWQSFYT*KVQFAD
Trigger: ATCCGCAAACTGCACCTTTCATGTGTAAAAGGATTG...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR GCA 90 bp ACTTCCCTGACAAGTCAAAGTACCACCTATTGGAAGAGTGTCAGTGCTACTCAAGATCTCTATAGATGTTaGTCAAATACTTGGCTTTCT +
Preference number: 2 (lower is better)
Translates to: TSLTSQSTTYWKSVSATQDLYRC*SNTWLS
Trigger: AGAAAGCCAAGTATTTGAGCAACATCTATAGAGATC...TTGAGTAGCACTGACACTCTTCCAATAGGTGGTACTTTGACTTGTCAGGGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR GCA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAATGTTTGATTCTTGCCTaGAAAGAGTACCAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: LGVYGICFAVLLEECFNKCLILA*KEYQRP
Trigger: TGGCCTCTGGTACTCTTTGCAGGCAAGAATCAAACA...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR GCA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACGAAATGTGGCAAAACTaGCAAATCTCTAACTACTTA +
Preference number: 2 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHEMWQN*QISNYL
Trigger: TAAGTAGTTAGAGATTTGGCAGTTTTGCCACATTTC...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCGCAGAAGTGAGATCTTaGAAACCAAATGGAGTTAGC +
Preference number: 2 (lower is better)
Translates to: LRLWKATISKLGIIKYIIAEVRS*KPNGVS
Trigger: GCTAACTCCATTTGGTTTCCAAGATCTCACTTCTGC...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR CCA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAACATCATTCATCTTTTTaGAAATCTCGCTGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: LGVYGICFAVLLEECFNKHHSSF*KSRCCH
Trigger: GTGGCAGCAGCGAGATTTCCAAAAAGATGAATGATG...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp ACAATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGCCCAAATCAGTCACCTaGGTTACAAACATATTGACA +
Preference number: 2 (lower is better)
Translates to: TMNYRMPQAYLSMKIFTRPKSVT*VTNILT
Trigger: TGTCAATATGTTTGTAACTCAGGTGACTGATTTGGG...CCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR GCA 90 bp ACAATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGATGTTGTTTGATTCTTaGCTGCAAAGAGTACCAGAG +
Preference number: 2 (lower is better)
Translates to: TMNYRMPQAYLSMKIFTRMLFDS*LQRVPE
Trigger: CTCTGGTACTCTTTGCAGGCAAGAATCAAACAACAT...CCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR TCA 90 bp AAGCCCAATCTTCATATAATGACTCTAACTTCCAGCCAAGTTGATTTGTTAAGTTTAAGTCCTTGCACTTaGCTTAGAGAAATGCTTGCT +
Preference number: 2 (lower is better)
Translates to: KPNLHIMTLTSSQVDLLSLSPCT*LREMLA
Trigger: AGCAAGCATTTCTCTAAGTCAAGTGCAAGGACTTAA...ACTTAACAAATCAACTTGGCTGGAAGTTAGAGTCATTATATGAAGATTGGGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR CCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGTGTTGCTCAAATACTTaGCTTTCTAGATCAGAGTAT +
Preference number: 2 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWCCSNT*LSRSEY
Trigger: ATACTCTGATCTAGAAAGCCAAGTATTTGAGCAACA...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR CCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCATCTCAAATCGACGGTaGAAAGGTGTCATAAGATTT +
Preference number: 2 (lower is better)
Translates to: LRLWKATISKLGIIKYIIISNRR*KGVIRF
Trigger: AAATCTTATGACACCTTTCCACCGTCGATTTGAGAT...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 72 bp TTCATCCGGCCTGGGCAGGTGCAAGTTCACCTCCGCTaGCAGTTGTGCGTAGCTCACTGTCCCCTCCATTGT +
Preference number: 3 (lower is better)
Translates to: FIRPGQVQVHLR*QLCVAHCPLHC
Trigger: ACAATGGAGGGGACAGTGAGCTACGCACAACTGCCAGCGGAGGTGAACTTGCACCTGCCCAGGCCGGATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR GCA 72 bp CCTGGGCAGGTGCAAGTTCACCTCCGCTGGCAGTTGTaGGTAGCTCACTGTCCCCTCCATTGTCAGACAGTT +
Preference number: 3 (lower is better)
Translates to: PGQVQVHLRWQL*VAHCPLHCQTV
Trigger: AACTGTCTGACAATGGAGGGGACAGTGAGCTACGCACAACTGCCAGCGGAGGTGAACTTGCACCTGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 72 bp CCATTCCCCAAACTGCAGGCTTCCCCAGAACTGTCATaGGAGCATCACCTTAGGCCTTCTCGCCCACTCCTC +
Preference number: 3 (lower is better)
Translates to: PFPKLQASPELS*EHHLRPSRPLL
Trigger: GAGGAGTGGGCGAGAAGGCCTAAGGTGATGCTCTCATGACAGTTCTGGGGAAGCCTGCAGTTTGGGGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 72 bp ATACCAGTTAGCAAAAGGCCACCACCCTCAGCCCTCTaGCAACCAGCATCACCACTCCAGAACCAGGTCCCT +
Preference number: 3 (lower is better)
Translates to: IPVSKRPPPSAL*QPASPLQNQVP
Trigger: AGGGACCTGGTTCTGGAGTGGTGATGCTGGTTGTCAGAGGGCTGAGGGTGGTGGCCTTTTGCTAACTGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394232.6
3UTR CCA 72 bp ATCACCTGCACCCTCCTTTTCATGACTCACAGCTTGTaGCCGTGTCCTCCGCTTAGCCATAGGACCACAGGA +
Preference number: 3 (lower is better)
Translates to: ITCTLLFMTHSL*PCPPLSHRTTG
Trigger: TCCTGTGGTCCTATGGCTAAGCGGAGGACACGGCCACAAGCTGTGAGTCATGAAAAGGAGGGTGCAGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 72 bp ATCACCAACCCCCAGGGGAAAGGGTTCAACCTCTGCTaGGCTTCCGAAATACTTCAAGCCCTGCAACCAGAC +
Preference number: 3 (lower is better)
Translates to: ITNPQGKGFNLC*ASEILQALQPD
Trigger: GTCTGGTTGCAGGGCTTGAAGTATTTCGGAAGCTCAGCAGAGGTTGAACCCTTTCCCCTGGGGGTTGGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR GCA 72 bp GGTGTCCTCCGGACCGTGATAGGCAGGAAGTGTGGATaGATTTCAGTGTCCTGGACAAGATTCTCTCGACCT +
Preference number: 3 (lower is better)
Translates to: GVLRTVIGRKCG*ISVSWTRFSRP
Trigger: AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGGAGGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR CAA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATAATCCTCTCCCTGCCTaGGACTGGGAAGACTTGAAG +
Preference number: 3 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYNPLPA*DWEDLK
Trigger: CTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATT...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR GCA 72 bp AGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTaGAGAGCTTGGCTGCACCCTTTACAAAGACCTGAG +
Preference number: 3 (lower is better)
Translates to: SPVLRLDNPAKV*RAWLHPLQRPE
Trigger: CTCAGGTCTTTGTAAAGGGTGCAGCCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR CCA 72 bp AGAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTaGAGAATCCTCTCCCTGCCTTGGACTGGGAAGACT +
Preference number: 3 (lower is better)
Translates to: RNACSSHSVCTH*RILSLPWTGKT
Trigger: AGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR CAA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTTCACTGTCCCCTCCATaGTCAGACAGTTCTGATGTT +
Preference number: 3 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPSLSPP*SDSSDV
Trigger: AACATCAGAACTGTCTGACAATGGAGGGGACAGTGA...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CAA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTCATGAAAGGTGCAGTTaGCGGATTGTAAGGTCATCG +
Preference number: 3 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPHERCS*RIVRSS
Trigger: CGATGACCTTACAATCCGCAAACTGCACCTTTCATG...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 72 bp CTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTaGGTTACAAACATATTGACAGCTGAAGTGGGTCCT +
Preference number: 3 (lower is better)
Translates to: LRVAQGTPKSVT*VTNILTAEVGP
Trigger: AGGACCCACTTCAGCTGTCAATATGTTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR TCA 72 bp CCCTGCAACCAGACACAGGCCCATAAGGACAGGACCTaGGTGAAACCAAGCAGTTTCTGGGGAAGGAAATAT +
Preference number: 3 (lower is better)
Translates to: PCNQTQAHKDRT*VKPSSFWGRKY
Trigger: ATATTTCCTTCCCCAGAAACTGCTTGGTTTCACTCAGGTCCTGTCCTTATGGGCCTGTGTCTGGTTGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR GCA 72 bp CGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTaGCTTGGACTGGGAAGACTTGAAGTTAAACACGCA +
Preference number: 3 (lower is better)
Translates to: RIVCALTGESSP*LGLGRLEVKHA
Trigger: TGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR GCA 72 bp CCCATCCTTCCCTCAGTCCCCATGTTGTTTGATTCTTaGCTGCAAAGAGTACCAGAGGCCACTGAACACATC +
Preference number: 3 (lower is better)
Translates to: PILPSVPMLFDS*LQRVPEATEHI
Trigger: GATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAGAATCAAACAACATGGGGACTGAGGGAAGGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR GCA 72 bp TGGCGAGTATTTGTCACATTGTCCCATTCCCCAAACTaGAGGCTTCCCCAGAACTGTCATGAGAGCATCACC +
Preference number: 3 (lower is better)
Translates to: WRVFVTLSHSPN*RLPQNCHESIT
Trigger: GGTGATGCTCTCATGACAGTTCTGGGGAAGCCTGCAGTTTGGGGAATGGGACAATGTGACAAATACTCGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 72 bp GTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTaGGAAGACTTGAAGTTAAACACGCAGCTCTGTGAT +
Preference number: 3 (lower is better)
Translates to: VHSLENPLPALD*EDLKLNTQLCD
Trigger: ATCACAGAGCTGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR CCA 72 bp AGGCCTTCTCGCCCACTCCTCACATTACATGTAATCTaGGCCACATCGTTTAACCTCTCAAGGTCCCCATGT +
Preference number: 3 (lower is better)
Translates to: RPSRPLLTLHVI*ATSFNLSRSPC
Trigger: ACATGGGGACCTTGAGAGGTTAAACGATGTGGCCCAGATTACATGTAATGTGAGGAGTGGGCGAGAAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 72 bp TTCTGGCTTTTGTCCTTCGAGCCAAGACCCTCAATTTaGAGGAGGGGCAGCAATGTTCCCAGTAAATACCGC +
Preference number: 3 (lower is better)
Translates to: FWLLSFEPRPSI*RRGSNVPSKYR
Trigger: GCGGTATTTACTGGGAACATTGCTGCCCCTCCTCCAAATTGAGGGTCTTGGCTCGAAGGACAAAAGCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 72 bp CATCCTTTTCGGGAGACATTTCCAGGCACGTTCAGGTaGACTGTCTGCAGGTCAGGTTCACATCTAGTCATG +
Preference number: 3 (lower is better)
Translates to: HPFRETFPGTFR*TVCRSGSHLVM
Trigger: CATGACTAGATGTGAACCTGACCTGCAGACAGTCCACCTGAACGTGCCTGGAAATGTCTCCCGAAAAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 72 bp ACTTTCAGGGAAGAACAGGAAATAGTCACCCACATCTaGGTACTCTCACCTCTCCCCAAAACCGGCACCTGT +
Preference number: 3 (lower is better)
Translates to: TFREEQEIVTHI*VLSPLPKTGTC
Trigger: ACAGGTGCCGGTTTTGGGGAGAGGTGAGAGTACCCAGATGTGGGTGACTATTTCCTGTTCTTCCCTGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 72 bp CTGACTTTGCTCTTAGGAACCACCATTCCGGGAGCGTaGTGTTGTAGCGGACATTACTACTCAACAGCTCAC +
Preference number: 3 (lower is better)
Translates to: LTLLLGTTIPGA*CCSGHYYSTAH
Trigger: GTGAGCTGTTGAGTAGTAATGTCCGCTACAACACCACGCTCCCGGAATGGTGGTTCCTAAGAGCAAAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 72 bp AGTCTGCAGAGCTTGGCTGCACCCTTTACAAAGACCTaGGTGATGGATGAGATGGGAATTGCCCTTGATTGG +
Preference number: 3 (lower is better)
Translates to: SLQSLAAPFTKT*VMDEMGIALDW
Trigger: CCAATCAAGGGCAATTCCCATCTCATCCATCACTCAGGTCTTTGTAAAGGGTGCAGCCAAGCTCTGCAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR CAA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATCTGCACAATGTGAGTTaGTTAATTCATCCTCCCAAC +
Preference number: 3 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYLHNVS*LIHPPN
Trigger: GTTGGGAGGATGAATTAACAAACTCACATTGTGCAG...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CAA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGCTGAAGATGGTGAGCTaGAGTTTCACAAGTCATCTG +
Preference number: 3 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWLKMVS*SFTSHL
Trigger: CAGATGACTTGTGAAACTCAAGCTCACCATCTTCAG...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CAA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGCACCTCCGCTGGCAGTaGTGCGTAGCTCACTGTCCC +
Preference number: 3 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWHLRWQ*CVAHCP
Trigger: GGGACAGTGAGCTACGCACAACTGCCAGCGGAGGTG...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 72 bp TGTGAGGTTCAGTGCTTCAACAGCCATCTCAGCCCATaGGGCAGCCTCAGTGATGGAAACTGCACTAAAAAT +
Preference number: 3 (lower is better)
Translates to: CEVQCFNSHLSP*GSLSDGNCTKN
Trigger: ATTTTTAGTGCAGTTTCCATCACTGAGGCTGCCTCATGGGCTGAGATGGCTGTTGAAGCACTGAACCTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR GCA 72 bp GTTCTTAGAGCTGGGCCTAAATGCGACACAGCTACATaGAAAAGCACAATGTTTTGGACAGGGTCAGAGTCC +
Preference number: 3 (lower is better)
Translates to: VLRAGPKCDTAT*KSTMFWTGSES
Trigger: GGACTCTGACCCTGTCCAAAACATTGTGCTTTTGCATGTAGCTGTGTCGCATTTAGGCCCAGCTCTAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 72 bp TTCTTACCCCACTCACCAATGTCCCTCTTGCATTCCTaGCCCCTATCTCTTCTTCCATGTAACCCTTTCTGT +
Preference number: 3 (lower is better)
Translates to: FLPHSPMSLLHS*PLSLLPCNPFC
Trigger: ACAGAAAGGGTTACATGGAAGAAGAGATAGGGGCCAGGAATGCAAGAGGGACATTGGTGAGTGGGGTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CAA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGCTGCACAATGTGAGTTaGTTAATTCATCCTCCCAAC +
Preference number: 3 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWLHNVS*LIHPPN
Trigger: GTTGGGAGGATGAATTAACAAACTCACATTGTGCAG...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CAA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTGTCACTTTTAGTATTTaGGGTGTCTATGGGATTTGC +
Preference number: 3 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPVTFSI*GVYGIC
Trigger: GCAAATCCCATAGACACCCAAAATACTAAAAGTGAC...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CAA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGACCCTCAGTCCCCATGTaGTTTGATTCTTGCCTGCAA +
Preference number: 3 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRPSVPM*FDSCLQ
Trigger: TTGCAGGCAAGAATCAAACAACATGGGGACTGAGGG...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CAA 90 bp ACTTCCCTGACAAGTCAAAGTACCACCTATTGGAAGAGTGTCAGTGCTACTCAATATCCTTTCTGGCTTTaGTCCTTCGAGCCAAGACCC +
Preference number: 3 (lower is better)
Translates to: TSLTSQSTTYWKSVSATQYPFWL*SFEPRP
Trigger: GGGTCTTGGCTCGAAGGACAAAAGCCAGAAAGGATA...TTGAGTAGCACTGACACTCTTCCAATAGGTGGTACTTTGACTTGTCAGGGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CAA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTCTTAATTATCTCAGGTaGAAGGTGCGTTACAGAAAG +
Preference number: 3 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPLNYLR*KVRYRK
Trigger: CTTTCTGTAACGCACCTTCAACCTGAGATAATTAAG...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 72 bp ACTCTAACTTCCAGCCAAGTTGATTTGTTAAGTTGTTaGGCTCCAAGGAGCTTTCTGGAGGAACCTGGGTGT +
Preference number: 3 (lower is better)
Translates to: TLTSSQVDLLSC*APRSFLEEPGC
Trigger: ACACCCAGGTTCCTCCAGAAAGCTCCTTGGAGCCCAACAACTTAACAAATCAACTTGGCTGGAAGTTAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR CCA 72 bp TTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACTaGCCTGACTTTCAGGGAAGAACAGGAAATAGTCAC +
Preference number: 3 (lower is better)
Translates to: FVAVAVGMIRDH*PDFQGRTGNSH
Trigger: GTGACTATTTCCTGTTCTTCCCTGAAAGTCAGGCCAGTGGTCTCGAATCATTCCCACAGCAACTGCTACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CAA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTTTGGTTTCTTTGAATTaGCAGTCATATGCCATCCAA +
Preference number: 3 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPLVSLN*QSYAIQ
Trigger: TTGGATGGCATATGACTGCAAATTCAAAGAAACCAA...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CAA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTTCCCATTCCGTTTCTTaGAATAGAGCAAAACAGAAA +
Preference number: 3 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFSHSVS*NRAKQK
Trigger: TTTCTGTTTTGCTCTATTCAAAGAAACGGAATGGGA...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CAA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGTGCTTGCATTTCATTaGATCAGACCTCATTTCCTG +
Preference number: 3 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRVLAFH*IRPHFL
Trigger: CAGGAAATGAGGTCTGATCAAATGAAATGCAAGCAC...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CAA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAACCAGAATGCTGTACATaGTCCCCCAGTGACCTGCCA +
Preference number: 3 (lower is better)
Translates to: LGVYGICFAVLLEECFNKPECCT*SPSDLP
Trigger: TGGCAGGTCACTGGGGGACAATGTACAGCATTCTGG...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 72 bp ATGACCCTGGCTTCTTTTGGAAGAGGTTTGGTGGGGTaGTTATACCATACTATATGCCAGGTGATGAGCATT +
Preference number: 3 (lower is better)
Translates to: MTLASFGRGLVG*LYHTICQVMSI
Trigger: AATGCTCATCACCTGGCATATAGTATGGTATAATCACCCCACCAAACCTCTTCCAAAAGAAGCCAGGGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394232.6
3UTR CCA 72 bp AACCGGAAATCCAGAACACTTCTGGTCCCAAACATTTaGGATAAGGAATACTCAGTCTGTAGCTATTTGGCC +
Preference number: 3 (lower is better)
Translates to: NRKSRTLLVPNI*DKEYSVCSYLA
Trigger: GGCCAAATAGCTACAGACTGAGTATTCCTTATCCCAAATGTTTGGGACCAGAAGTGTTCTGGATTTCCGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394232.6
3UTR-3UTR CAA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCAATCCTCTCCCTGCCTaGGACTGGGAAGACTTGAAG +
Preference number: 3 (lower is better)
Translates to: LRLWKATISKLGIIKYIINPLPA*DWEDLK
Trigger: CTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATT...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR CAA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAATCACCAATGTCCCTCTaGCATTCCTGGCCCCTATCT +
Preference number: 3 (lower is better)
Translates to: LGVYGICFAVLLEECFNKSPMSL*HSWPLS
Trigger: AGATAGGGGCCAGGAATGCAAGAGGGACATTGGTGA...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 72 bp AGACTATTTTTAAAGACGCATTTATCTCAGCAGGAGTaGCGGCATTTAAGAAGTAGCCCGGTACTCAGGCTA +
Preference number: 3 (lower is better)
Translates to: RLFLKTHLSQQE*RHLRSSPVLRL
Trigger: TAGCCTGAGTACCGGGCTACTTCTTAAATGCCGTCACTCCTGCTGAGATAAATGCGTCTTTAAAAATAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR-3UTR CAA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACGTGCTTGCATTTCATTaGATCAGACCTCATTTCCTG +
Preference number: 3 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHVLAFH*IRPHFL
Trigger: CAGGAAATGAGGTCTGATCAAATGAAATGCAAGCAC...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CAA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACCAGTGGTATATATATTaGGAGGAATCAGGGTGTCCA +
Preference number: 3 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHQWYIY*EESGCP
Trigger: TGGACACCCTGATTCCTCCAAATATATATACCACTG...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CAA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGTGGGTTGGGGTTTACTaGTTACATGACCTCAGGATG +
Preference number: 3 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWWVGVY*LHDLRM
Trigger: CATCCTGAGGTCATGTAACAAGTAAACCCCAACCCA...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CAA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGAGATATTCCTCCTTCCTaGAAACCTGAAATTCATGGA +
Preference number: 3 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRDIPPS*KPEIHG
Trigger: TCCATGAATTTCAGGTTTCAAGGAAGGAGGAATATC...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 72 bp TATTGGAAGAGTGTCAGTGCTACTCAAAATATGGCTTaGGAATTGATGCCATCTATGTCACCTGGGAGTTTG +
Preference number: 3 (lower is better)
Translates to: YWKSVSATQNMA*ELMPSMSPGSL
Trigger: CAAACTCCCAGGTGACATAGATGGCATCAATTCTCAAGCCATATTTTGAGTAGCACTGACACTCTTCCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR GCA 72 bp ATTTATTTCCAAACGGTTCTTAGAGCTGGGCCTAAATaGGACACAGCTACATGCAAAAGCACAATGTTTTGG +
Preference number: 3 (lower is better)
Translates to: IYFQTVLRAGPK*DTATCKSTMFW
Trigger: CCAAAACATTGTGCTTTTGCATGTAGCTGTGTCGCATTTAGGCCCAGCTCTAAGAACCGTTTGGAAATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CAA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTAAATGCTGGCAATATTaGCAGATACCAGTTGTGGAA +
Preference number: 3 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVKCWQY*QIPVVE
Trigger: TTCCACAACTGGTATCTGCAAATATTGCCAGCATTT...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CAA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACAAATGCTGGCAATATTaGCAGATACCAGTTGTGGAA +
Preference number: 3 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHKCWQY*QIPVVE
Trigger: TTCCACAACTGGTATCTGCAAATATTGCCAGCATTT...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CAA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGATTTAATTTTAAGAAGTaGGGACCAGGCATAGTAGCT +
Preference number: 3 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRFNFKK*GPGIVA
Trigger: AGCTACTATGCCTGGTCCCAACTTCTTAAAATTAAA...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CAA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCCAAGACTTCAGTCTATaGCTGACCTTCATCAGAGAG +
Preference number: 3 (lower is better)
Translates to: LRLWKATISKLGIIKYIIQDFSL*LTFIRE
Trigger: CTCTCTGATGAAGGTCAGCAATAGACTGAAGTCTTG...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CAA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACGCTTCTGAAAGACCTTaGCTTTCTAAAGGAATACAT +
Preference number: 3 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHASERP*LSKGIH
Trigger: ATGTATTCCTTTAGAAAGCAAAGGTCTTTCAGAAGC...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR-3UTR CAA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACCGTTACCTCACTTACTaGTCATTTTTGCATTTTTGG +
Preference number: 3 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHRYLTY*SFLHFW
Trigger: CCAAAAATGCAAAAATGACAAGTAAGTGAGGTAACG...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 72 bp AGGTGTCATAAGATTTACCCCTACCAACCCGTTAATTaGGGAAAATTACAGAAAGATGTCCCGAAGCTATCA +
Preference number: 3 (lower is better)
Translates to: RCHKIYPYQPVN*GKLQKDVPKLS
Trigger: TGATAGCTTCGGGACATCTTTCTGTAATTTTCCTCAATTAACGGGTTGGTAGGGGTAAATCTTATGACACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 72 bp ATCAAAAATCAGCATCAGGAGATGACACAATACAGTTaGGACTATGGAAAGCAACTATTTCCAAGCTGGGCA +
Preference number: 3 (lower is better)
Translates to: IKNQHQEMTQYS*DYGKQLFPSWA
Trigger: TGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAACTGTATTGTGTCATCTCCTGATGCTGATTTTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR GCA 72 bp TCATTTCATCATTCATCTTTTTGGAAATCTCGCTGCTaGCACAACAGCCATGCATATAAATTCCTCACCATG +
Preference number: 3 (lower is better)
Translates to: SFHHSSFWKSRC*HNSHAYKFLTM
Trigger: CATGGTGAGGAATTTATATGCATGGCTGTTGTGGCAGCAGCGAGATTTCCAAAAAGATGAATGATGAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR GCA 72 bp GTTTCATTTCATCATTCATCTTTTTGGAAATCTCGCTaGTGCCACAACAGCCATGCATATAAATTCCTCACC +
Preference number: 3 (lower is better)
Translates to: VSFHHSSFWKSR*CHNSHAYKFLT
Trigger: GGTGAGGAATTTATATGCATGGCTGTTGTGGCAGCAGCGAGATTTCCAAAAAGATGAATGATGAAATGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 72 bp TCAGCATCAGGAGATGACACAATACAGTTGAGACTATaGAAAGCAACTATTTCCAAGCTGGGCATCATAAAA +
Preference number: 3 (lower is better)
Translates to: SASGDDTIQLRL*KATISKLGIIK
Trigger: TTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAACTGTATTGTGTCATCTCCTGATGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR CCA 72 bp CATTATAGTAAAGCCATCAAGGGAATAGTCAATGAATaGTCTCAGGGAATGGCGAGTATTTGTCACATTGTC +
Preference number: 3 (lower is better)
Translates to: HYSKAIKGIVNE*SQGMASICHIV
Trigger: GACAATGTGACAAATACTCGCCATTCCCTGAGACCATTCATTGACTATTCCCTTGATGGCTTTACTATAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 72 bp ACATTTGGGATAAGGAATACTCAGTCTGTAGCTATTTaGCCTTTGACAAGTGACTTTCCTGTGTTCCAGTTT +
Preference number: 3 (lower is better)
Translates to: TFGIRNTQSVAI*PLTSDFPVFQF
Trigger: AAACTGGAACACAGGAAAGTCACTTGTCAAAGGCCAAATAGCTACAGACTGAGTATTCCTTATCCCAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394232.6
3UTR TCA 72 bp TTAAATGGCTGTAAGAAATTGTGCTTGCATTTCATTTaGTCAGACCTCATTTCCTGGGACCTCAAACACCAA +
Preference number: 3 (lower is better)
Translates to: LNGCKKLCLHFI*SDLISWDLKHQ
Trigger: TTGGTGTTTGAGGTCCCAGGAAATGAGGTCTGATCAAATGAAATGCAAGCACAATTTCTTACAGCCATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 72 bp AAACATCTTCCTCCACTGGCTACATGTCAGCACATTTaGACCAACAGTATTACAAATGCCTTCTATACCTAT +
Preference number: 3 (lower is better)
Translates to: KHLPPLATCQHI*TNSITNAFYTY
Trigger: ATAGGTATAGAAGGCATTTGTAATACTGTTGGTTCAAATGTGCTGACATGTAGCCAGTGGAGGAAGATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR TCA 72 bp CTCATGTGCTCATTCATCGGTCTATTCATCATCTATTaGGACCTACTACGTATCAAATACTGTGTTAGTCAC +
Preference number: 3 (lower is better)
Translates to: LMCSFIGLFIIY*DLLRIKYCVSH
Trigger: GTGACTAACACAGTATTTGATACGTAGTAGGTCTCAATAGATGATGAATAGACCGATGAATGAGCACATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394232.6
3UTR CCA 72 bp TGTGAACCACTGCACCTGGCCTCCAAGATTTCTATTTaGCAAATTCACATAGCTACTTTCATACTTGTTAAA +
Preference number: 3 (lower is better)
Translates to: CEPLHLASKISI*QIHIATFILVK
Trigger: TTTAACAAGTATGAAAGTAGCTATGTGAATTTGCCAAATAGAAATCTTGGAGGCCAGGTGCAGTGGTTCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394232.6
3UTR GCA 72 bp AGGAGACATAGGAGAAAAGTAGATCTCTATAGATGTTaGTCAAATACTTGGCTTTCTAGATCAGAGTATCCT +
Preference number: 3 (lower is better)
Translates to: RRHRRKVDLYRC*SNTWLSRSEYP
Trigger: AGGATACTCTGATCTAGAAAGCCAAGTATTTGAGCAACATCTATAGAGATCTACTTTTCTCCTATGTCTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR TCA 72 bp AGTAGCCATTCTGCATTCTGTAAATTTGTTTTCGAATaGGATCTATGTAGAGAAATTTGCTCCACTCTGTCT +
Preference number: 3 (lower is better)
Translates to: SSHSAFCKFVFE*DLCREICSTLS
Trigger: AGACAGAGTGGAGCAAATTTCTCTACATAGATCTCATTCGAAAACAAATTTACAGAATGCAGAATGGCTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CCA 72 bp AGAAAAGTAGATCTCTATAGATGTTGCTCAAATACTTaGCTTTCTAGATCAGAGTATCCTCAATGCTACTAT +
Preference number: 3 (lower is better)
Translates to: RKVDLYRCCSNT*LSRSEYPQCYY
Trigger: ATAGTAGCATTGAGGATACTCTGATCTAGAAAGCCAAGTATTTGAGCAACATCTATAGAGATCTACTTTTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTGCGGCCGCCTCCGGATaGAGGCAGAGCAGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPAAASG*RQSSVR
Trigger: GCGGACGCTGCTCTGCCTGCATCCGGAGGCGGCCGC...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394232.6
3UTR CAA 72 bp CGGCCTGGGCAGGTGCAAGTTCACCTCCGCTGGCAGTaGTGCGTAGCTCACTGTCCCCTCCATTGTCAGACA +
Preference number: 4 (lower is better)
Translates to: RPGQVQVHLRWQ*CVAHCPLHCQT
Trigger: TGTCTGACAATGGAGGGGACAGTGAGCTACGCACAACTGCCAGCGGAGGTGAACTTGCACCTGCCCAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCGCGGCCGCCTCCGGATaGAGGCAGAGCAGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTAAASG*RQSSVR
Trigger: GCGGACGCTGCTCTGCCTGCATCCGGAGGCGGCCGC...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394232.6
ENST00000545111.6
CDS-3UTR TCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCCAGGCCTCCCAGGATaGAGGCGCCCGCCATCATTC +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCPGLPG*RRPPSF
Trigger: GAATGATGGCGGGCGCCTTCATCCTGGGAGGCCTGG...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGAGCATTCCTTCCTTCTaGGTGTGGGGCAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGSIPSF*VWGRAL
Trigger: GAGGGCCCTGCCCCACACCCAGAAGGAAGGAATGCT...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557410.5
CDS-3UTR GCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGTCCGGCCTGGGCAGGTaGAAGTTCACCTCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWSGLGR*KFTSAG
Trigger: GCCAGCGGAGGTGAACTTGCACCTGCCCAGGCCGGA...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTGGCGGGTGTCACACCTaGATCACCGCGCCCACGCCG +
Preference number: 4 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPGGCHT*ITAPTP
Trigger: CGGCGTGGGCGCGGTGATGCAGGTGTGACACCCGCC...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545111.6
CDS-3UTR CCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCGGGTGGCAAATCCGCTaGCGGCCGCCTCCGGATGCA +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTGWQIR*RPPPDA
Trigger: TGCATCCGGAGGCGGCCGCCAGCGGATTTGCCACCC...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGCCGAAGGTTATGCTCTaGGTGGCAAATCCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGPKVML*VANPLA
Trigger: CGCCAGCGGATTTGCCACCCAGAGCATAACCTTCGG...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS-3UTR CCA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTCGGCTAACGCGGAGCTaGGCGATCCGGGCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFRLTRS*AIRAEA
Trigger: TGCCTCCGCCCGGATCGCCCAGCTCCGCGTTAGCCG...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545111.6
CDS-3UTR TCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCCCAGGCCTCCCAGGATaGAGGCGCCCGCCATCATTC +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTPGLPG*RRPPSF
Trigger: GAATGATGGCGGGCGCCTTCATCCTGGGAGGCCTGG...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATAGGAACGTGCGCCCATaGTCAGGCAGGAGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYRNVRP*SGRSVL
Trigger: GAGCACACTCCTGCCTGATCATGGGCGCACGTTCCT...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGCTGCGACTGCCTGGTTaGCCCTTGAGCTATATCCCT +
Preference number: 4 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGLRLPG*PLSYIP
Trigger: AGGGATATAGCTCAAGGGGCAACCAGGCAGTCGCAG...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGTCCATTCCTTGGTTCTaGGACTGCCTGGTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGSIPWF*DCLVAP
Trigger: AGGGGCAACCAGGCAGTCGCAGAACCAAGGAATGGA...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCGCAGCAAAGGGAGGCTaGATCGGCTGCAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCAAKGG*IGCKAQ
Trigger: CTGTGCCTTGCAGCCGATCCAGCCTCCCTTTGCTGC...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTGGGGCGGGAGGCTCCTaGGTCCTCTACTCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPGAGGS*VLYSAG
Trigger: TCCCGCTGAGTAGAGGACCCAGGAGCCTCCCGCCCC...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545111.6
CDS-3UTR TCA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTGACTGCGTGCTGGCCTaGTTTGTCCTGCCACCGAAG +
Preference number: 4 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPDCVLA*FVLPPK
Trigger: CTTCGGTGGCAGGACAAATCAGGCCAGCACGCAGTC...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGGACTGCGTGCTGGCCTaGTTTGTCCTGCCACCGAAG +
Preference number: 4 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKDCVLA*FVLPPK
Trigger: CTTCGGTGGCAGGACAAATCAGGCCAGCACGCAGTC...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGTCCAGCTGTTTTTCTTaGCAGGGAGCGAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGSSCFS*QGASRT
Trigger: AGTCCTGCTCGCTCCCTGTCAAGAAAAACAGCTGGA...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTCCAGGCCTCCCAGGATaGAGGCGCCCGCCATCATTC +
Preference number: 4 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPPGLPG*RRPPSF
Trigger: GAATGATGGCGGGCGCCTTCATCCTGGGAGGCCTGG...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGCCACCCTCAGCCCTCTaGCAACCAGCATCACCACTC +
Preference number: 4 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKPPSAL*QPASPL
Trigger: GAGTGGTGATGCTGGTTGTCAGAGGGCTGAGGGTGG...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS-3UTR TCA 90 bp ACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTGGGAAGGAGGACCAGTaGGGCCGCAAGGTCTCCGGA +
Preference number: 4 (lower is better)
Translates to: TVIGRKCGCISVSWTRFSGKEDQ*GRKVSG
Trigger: TCCGGAGACCTTGCGGCCTCACTGGTCCTCCTTCCC...AGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545111.6
CDS-3UTR GCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCCCAGGCCATGGCAGATaGGTACAGGCCCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFPGHGR*VQAPSH
Trigger: ATGACTGGGGGCCTGTACGCATCTGCCATGGCCTGG...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR GCA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGCATTCCAGGCTGCAATaGTTGTCCCACAGAACAGGC +
Preference number: 4 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGHSRLQ*LSHRTG
Trigger: GCCTGTTCTGTGGGACAAGCATTGCAGCCTGGAATG...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGGGAGGCTGGATCGGCTaGAAGGCACAGCCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSGGWIG*KAQPLC
Trigger: GCAAAGGGGCTGTGCCTTGCAGCCGATCCAGCCTCC...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTTGGCAGACTGCGTGCTaGCCTGATTTGTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPWQTAC*PDLSCH
Trigger: GTGGCAGGACAAATCAGGCCAGCACGCAGTCTGCCA...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCGCCCCAGCCATAGTGTaGGATGATGCTCCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCAPAIV*DDAPGH
Trigger: ATGGCCTGGAGCATCATCCCACACTATGGCTGGGGC...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GGAGAATCCTCTCCCTGCCTTGGACTGGGAAGACTTGAAGTTAAACACGCAGCTACTTCAGGGCCACCATaGACACGGTGCAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GESSPCLGLGRLEVKHAATSGPP*TRCRAE
Trigger: CTCTGCCCTGCACCGTGTCCATGGTGGCCCTGAAGT...AGCTGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCACTTCAGGGCCACCATaGACACGGTGCAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFTSGPP*TRCRAE
Trigger: CTCTGCCCTGCACCGTGTCCATGGTGGCCCTGAAGT...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGAGTGTGTGCACTCACTaGAGAATCCTCTCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGSVCTH*RILSLP
Trigger: AGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACT...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTTGTGTCCCCAGGGCTTaGCAGAGAGACTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKICVPRA*QRDWPM
Trigger: CATGGGCCAGTCTCTCTGCCAAGCCCTGGGGACACA...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCCAGGCACGTTCAGGTaGACTGTCTGCAGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCPGTFR*TVCRSG
Trigger: ACCTGACCTGCAGACAGTCCACCTGAACGTGCCTGG...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCGTCTTAGGACCTGGGTaGCAAATCCGCTGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTVLGPG*QIRWRP
Trigger: CGGCCGCCAGCGGATTTGCCACCCAGGTCCTAAGAC...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557410.5
3UTR CAA 72 bp CCTATCACCTGCACCCTCCTTTTCATGACTCACAGCTaGTGGCCGTGTCCTCCGCTTAGCCATAGGACCACA +
Preference number: 4 (lower is better)
Translates to: PITCTLLFMTHS*WPCPPLSHRTT
Trigger: TGTGGTCCTATGGCTAAGCGGAGGACACGGCCACAAGCTGTGAGTCATGAAAAGGAGGGTGCAGGTGATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGTGCCTGGTTGCCCCTTaGGCTATATCCCTCGCTCTG +
Preference number: 4 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWCLVAP*AISLAL
Trigger: CAGAGCGAGGGATATAGCTCAAGGGGCAACCAGGCA...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGACCAGGCCTCCCAGGATaGAGGCGCCCGCCATCATTC +
Preference number: 4 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRPGLPG*RRPPSF
Trigger: GAATGATGGCGGGCGCCTTCATCCTGGGAGGCCTGG...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCCGGCCAGAGACATGCTaGGGACTCGCTTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTRPETC*GLASFP
Trigger: TGGGAAGGAAGCGAGTCCTCAGCATGTCTCTGGCCG...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGCGGCCAGAGACATGCTaGGGACTCGCTTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSRPETC*GLASFP
Trigger: TGGGAAGGAAGCGAGTCCTCAGCATGTCTCTGGCCG...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GGAGAATCCTCTCCCTGCCTTGGACTGGGAAGACTTGAAGTTAAACACGCAGCTCTAGTTCTTGCAGGCTaGTGTTCATCCGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GESSPCLGLGRLEVKHAALVLAG*CSSGLG
Trigger: GCCCAGGCCGGATGAACATCAGCCTGCAAGAACTAG...AGCTGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCAGCCATCTCAGCCCATaGGGCAGCCTCAGTGATGGA +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFSHLSP*GSLSDG
Trigger: TCCATCACTGAGGCTGCCTCATGGGCTGAGATGGCT...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTGGCGGGCAGATCACTTaGGGCCAGGAGTTCGAGACG +
Preference number: 4 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRAGGQIT*GQEFET
Trigger: CGTCTCGAACTCCTGGCCTCAAGTGATCTGCCCGCC...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCGCACCCTCCTTTTCATaGCTCACAGCTTGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCAPSFS*LTACGR
Trigger: ACGGCCACAAGCTGTGAGTCATGAAAAGGAGGGTGC...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCCCAGGCCATGGCAGATaGGTACAGGCCCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTPGHGR*VQAPSH
Trigger: ATGACTGGGGGCCTGTACGCATCTGCCATGGCCTGG...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR GCA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGCATTGCCCTTCCTTCTaGTTCCTGCCTGAATTGTGG +
Preference number: 4 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGHCPSF*FLPELW
Trigger: CCACAATTCAGGCAGGAAGCAGAAGGAAGGGCAATG...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTTGGCAGACTGCGTGCTaGCCTGATTTGTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKIWQTAC*PDLSCH
Trigger: GTGGCAGGACAAATCAGGCCAGCACGCAGTCTGCCA...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CTTGCCTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGGGAGCGAGCAGGACTTaGCAGACTGCGTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LACKEYQRPLNTSHIVFGGASRT*QTACWP
Trigger: AGGCCAGCACGCAGTCTGCCAAGTCCTGCTCGCTCC...CCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGAGGAGCGAGCAGGACTTaGCAGACTGCGTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRGASRT*QTACWP
Trigger: AGGCCAGCACGCAGTCTGCCAAGTCCTGCTCGCTCC...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTGAAGGCTGTCCATTCTaGAGGGCGCCATCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPEGCPF*RAPSWP
Trigger: AGGCCAAGATGGCGCCCTCCAGAATGGACAGCCTTC...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCGCCATCAGGTCTGTCTaGCCCCGAAGGCTGTCCATT +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFAIRSV*PRRLSI
Trigger: AATGGACAGCCTTCGGGGCCAGACAGACCTGATGGC...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCGCCCCAGCCATAGTGTaGGATGATGCTCCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFAPAIV*DDAPGH
Trigger: ATGGCCTGGAGCATCATCCCACACTATGGCTGGGGC...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCACTTCAGGGCCACCATaGACACGGTGCAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILTSGPP*TRCRAE
Trigger: CTCTGCCCTGCACCGTGTCCATGGTGGCCCTGAAGT...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCACTTCAGGGCCACCATaGACACGGTGCAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTTSGPP*TRCRAE
Trigger: CTCTGCCCTGCACCGTGTCCATGGTGGCCCTGAAGT...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATCTGACCAGCCAGCGCTaGTACCAGGTTCCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYLTSQR*YQVPVE
Trigger: TTCAACAGGAACCTGGTACCAGCGCTGGCTGGTCAG...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTTGCTCCAAGTCCATGTaGCAGCCCTCCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKICSKSM*QPSFCS
Trigger: GGAGCAGAAGGAGGGCTGCCACATGGACTTGGAGCA...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTGCTCCAAGTCCATGTaGCAGCCCTCCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFCSKSM*QPSFCS
Trigger: GGAGCAGAAGGAGGGCTGCCACATGGACTTGGAGCA...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGTGCTCCAAGTCCATGTaGCAGCCCTCCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWCSKSM*QPSFCS
Trigger: GGAGCAGAAGGAGGGCTGCCACATGGACTTGGAGCA...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAAGCAGCAAAGGGAGGCTaGATCGGCTGCAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKAAKGG*IGCKAQ
Trigger: CTGTGCCTTGCAGCCGATCCAGCCTCCCTTTGCTGC...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTGACTGCGTGCTGGCCTaGTTTGTCCTGCCACCGAAG +
Preference number: 4 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRADCVLA*FVLPPK
Trigger: CTTCGGTGGCAGGACAAATCAGGCCAGCACGCAGTC...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTGCCTGGTTGCCCCTTaGGCTATATCCCTCGCTCTG +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILCLVAP*AISLAL
Trigger: CAGAGCGAGGGATATAGCTCAAGGGGCAACCAGGCA...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGTACCGATGCCTGAGATaGGTCGGCAGAAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKYRCLR*VGRRGR
Trigger: CCTTCCTCTTCTGCCGACTCATCTCAGGCATCGGTA...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTAATTGGTCCCCATGCTaGAGCCCCAGCCATAGTGTG +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKINWSPC*SPSHSV
Trigger: CACACTATGGCTGGGGCTTCAGCATGGGGACCAATT...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGAAAAATCAAGGAGTCTaGAGGCAGAAGGAGCGTGCT +
Preference number: 4 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGKNQGV*RQKERA
Trigger: AGCACGCTCCTTCTGCCTTCAGACTCCTTGATTTTT...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGGGGTTCAACCTCTGCTaGGCTTCCGAAATACTTCAA +
Preference number: 4 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGGFNLC*ASEILQ
Trigger: TTGAAGTATTTCGGAAGCTCAGCAGAGGTTGAACCC...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCGGTGGGAGAATCGCTTaGACCTGGGAGGTGGAGATT +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFGGRIA*TWEVEI
Trigger: AATCTCCACCTCCCAGGTTCAAGCGATTCTCCCACC...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGCTGCGACTGCCTGGTTaGCCCTTGAGCTATATCCCT +
Preference number: 4 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWLRLPG*PLSYIP
Trigger: AGGGATATAGCTCAAGGGGCAACCAGGCAGTCGCAG...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTCCACAGAACAGGCACTaGCAGCCGATCATTGCAGAC +
Preference number: 4 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPPQNRH*QPIIAD
Trigger: GTCTGCAATGATCGGCTGGCAGTGCCTGTTCTGTGG...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GGAGAATCCTCTCCCTGCCTTGGACTGGGAAGACTTGAAGTTAAACACGCAGCTCAACTTCTCCTCCCGTaGTATCCAAGGTGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: GESSPCLGLGRLEVKHAAQLLLP*YPRCPP
Trigger: CGGAGGACACCTTGGATAGCACGGGAGGAGAAGTTG...AGCTGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGAAGGCACAGCCCCTTTaGCCATTGCCCTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWKAQPL*PLPFLL
Trigger: CAGAAGGAAGGGCAATGGGCAAAGGGGCTGTGCCTT...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATGGCCTTGACATCATCTaGGTGAGGGATACCCTGGTA +
Preference number: 4 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYGLDII*VRDTLV
Trigger: TACCAGGGTATCCCTCACCCAGATGATGTCAAGGCC...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGGAAGGCTGTCCATTCTaGAGGGCGCCATCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSEGCPF*RAPSWP
Trigger: AGGCCAAGATGGCGCCCTCCAGAATGGACAGCCTTC...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GGAGAATCCTCTCCCTGCCTTGGACTGGGAAGACTTGAAGTTAAACACGCAGCTCACTGGAAGCGGCCATaGCCACACTCATCCATGATG +
Preference number: 4 (lower is better)
Translates to: GESSPCLGLGRLEVKHAAHWKRP*PHSSMM
Trigger: CATCATGGATGAGTGTGGCCATGGCCGCTTCCAGTG...AGCTGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTAAACCTTGGGCTCTCTaGCATGAACTTCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPKPWAL*HELQGH
Trigger: GTGGCCCTGAAGTTCATGCCAGAGAGCCCAAGGTTT...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTGTTGCTCTCTGGTTaGTGGGATACAGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCLLLSG*WDTAPL
Trigger: CAGTGGAGCTGTATCCCACCAACCAGAGAGCAACAG...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTAAGGCTGTTGCTCTCTaGTTGGTGGGATACAGCTCC +
Preference number: 4 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPKAVAL*LVGYSS
Trigger: GGAGCTGTATCCCACCAACCAGAGAGCAACAGCCTT...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTCTGTTCTCGAGTCTCTaGCAGTCGAAGGGCAATCAG +
Preference number: 4 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPLFSSL*QSKGNQ
Trigger: CTGATTGCCCTTCGACTGCCAGAGACTCGAGAACAG...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGCAAGTTCACCTCCGCTaGCAGTTGTGCGTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWQVHLR*QLCVAH
Trigger: GTGAGCTACGCACAACTGCCAGCGGAGGTGAACTTG...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCGATGTTCATCCGGCCTaGGCAGGTGCAAGTTCACCT +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFDVHPA*AGASSP
Trigger: AGGTGAACTTGCACCTGCCCAGGCCGGATGAACATC...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTGCTTGGCAGAGAGACTaGCCCATGGTCAGGGCTCAA +
Preference number: 4 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFAWQRD*PMVRAQ
Trigger: TTGAGCCCTGACCATGGGCCAGTCTCTCTGCCAAGC...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GGAGAATCCTCTCCCTGCCTTGGACTGGGAAGACTTGAAGTTAAACACGCAGCTCAGCCACTCCAGCCCTaGCTTTCCTTCCTCCAGATT +
Preference number: 4 (lower is better)
Translates to: GESSPCLGLGRLEVKHAAQPLQP*LSFLQI
Trigger: AATCTGGAGGAAGGAAAGCCAGGGCTGGAGTGGCTG...AGCTGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGCCAGGCACGTTCAGGTaGACTGTCTGCAGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSPGTFR*TVCRSG
Trigger: ACCTGACCTGCAGACAGTCCACCTGAACGTGCCTGG...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCACCATTCCGGGAGCGTaGTGTTGTAGCGGACATTAC +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCTIPGA*CCSGHY
Trigger: GTAATGTCCGCTACAACACCACGCTCCCGGAATGGT...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTACTATCATCCCTGGGTaGCAAATCCGCTGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPTIIPG*QIRWRP
Trigger: CGGCCGCCAGCGGATTTGCCACCCAGGGATGATAGT...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545111.6
CDS-3UTR TCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTACCGATGCCTGAGATaGGTCGGCAGAAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILYRCLR*VGRRGR
Trigger: CCTTCCTCTTCTGCCGACTCATCTCAGGCATCGGTA...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCCCCAATACCGATGCCTaGGATGAGTCGGCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILPNTDA*DESAEE
Trigger: CTCTTCTGCCGACTCATCTCAGGCATCGGTATTGGG...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGCCCAATACCGATGCCTaGGATGAGTCGGCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSPNTDA*DESAEE
Trigger: CTCTTCTGCCGACTCATCTCAGGCATCGGTATTGGG...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCAGATGCCCAGCCAACTaGGGTGTTCTCCTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILRCPAN*GVLLAS
Trigger: AGAAGCGAGGAGAACACCTCAGTTGGCTGGGCATCT...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGGGCTGCCCAGGAAGCTaGCGAGGTAAATCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSGCPGS*RGKSGS
Trigger: ACTTCCTGATTTACCTCGTCAGCTTCCTGGGCAGCC...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGGATGGGAATTGCCCTTaGTTGGCTAGGTGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKDGNCP*LARWLV
Trigger: AACCAGCCACCTAGCCAATCAAGGGCAATTCCCATC...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCTACATTGTCCCCCAGTaGCCTGCCACAGAGACTATT +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCYIVPQ*PATETI
Trigger: AATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTA...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTTCCCCAGAACTGTCATaGGAGCATCACCTTAGGCCT +
Preference number: 4 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPSPELS*EHHLRP
Trigger: AGGCCTAAGGTGATGCTCTCATGACAGTTCTGGGGA...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGGGTGGGAGAATCGCTTaGACCTGGGAGGTGGAGATT +
Preference number: 4 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSGGRIA*TWEVEI
Trigger: AATCTCCACCTCCCAGGTTCAAGCGATTCTCCCACC...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTAATTCATCCTCCCAACAGGGCGGGCAGATCACTTaGGGCCAGGAGTTCGAGACG +
Preference number: 4 (lower is better)
Translates to: AWIKQTAQCEFVNSSSQQGGQIT*GQEFET
Trigger: CGTCTCGAACTCCTGGCCTCAAGTGATCTGCCCGCC...CTGTTGGGAGGATGAATTAACAAACTCACATTGTGCAGTCTGCTTAATCCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGAAGGCTCCATATCCCTaGACGAAGGAAGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKKAPYP*TKEERE
Trigger: CTCCCTCTCTTCCTTCGTGCAGGGATATGGAGCCTT...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTAAGGCTCCATATCCCTaGACGAAGGAAGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKIKAPYP*TKEERE
Trigger: CTCCCTCTCTTCCTTCGTGCAGGGATATGGAGCCTT...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR GCA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGAGGAAGTCATTATCTTaGTCCAAGTCCATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGRKSLS*SKSMWQ
Trigger: CTGCCACATGGACTTGGAGCAAGATAATGACTTCCT...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCATTCCAGGCTGCAATaGTTGTCCCACAGAACAGGC +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKIHSRLQ*LSHRTG
Trigger: GCCTGTTCTGTGGGACAAGCATTGCAGCCTGGAATG...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR GCA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTCAGAGCATTCCAGGCTaGAATGCTTGTCCCACAGAA +
Preference number: 4 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPQSIPG*NACPTE
Trigger: TTCTGTGGGACAAGCATTGCAGCCTGGAATGCTCTG...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCGGAGAATCCTCTCCCTaGCTTGGACTGGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFGESSP*LGLGRL
Trigger: AAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTGGAGAATCCTCTCCCTaGCTTGGACTGGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKIGESSP*LGLGRL
Trigger: AAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGGGAGAATCCTCTCCCTaGCTTGGACTGGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWGESSP*LGLGRL
Trigger: AAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCTCCTCGCATAGTGTGTaGACTCACTGGAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCSSHSV*THWRIL
Trigger: GAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTAATCCTGCAAAAGTCTaGAGAGCTTGGCTGCACCCT +
Preference number: 4 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPNPAKV*RAWLHP
Trigger: AGGGTGCAGCCAAGCTCTGCAGACTTTTGCAGGATT...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTCACCAATGTCCCTCTTaGATTCCTGGCCCCTATCTC +
Preference number: 4 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPHQCPS*IPGPYL
Trigger: GAGATAGGGGCCAGGAATGCAAGAGGGACATTGGTG...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGAGCCCCTTTGCCCATTaGCCTTCCTTCTGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSSPFAH*PSFCFL
Trigger: CAGGAAGCAGAAGGAAGGGCAATGGGCAAAGGGGCT...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGAGGAGGCTGGATCGGCTaGAAGGCACAGCCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRGGWIG*KAQPLC
Trigger: GCAAAGGGGCTGTGCCTTGCAGCCGATCCAGCCTCC...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTCGTCTTCCTCATCATaGCCTTCGGTGACATCACTC +
Preference number: 4 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYSSSSS*PSVTSL
Trigger: GAGTGATGTCACCGAAGGCCATGATGAGGAAGACGA...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CTTGCCTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGGAAGGCTGTCCATTCTaGAGGGCGCCATCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LACKEYQRPLNTSHIVFGEGCPF*RAPSWP
Trigger: AGGCCAAGATGGCGCCCTCCAGAATGGACAGCCTTC...CCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGATGGTCTCGTACTGGTaGGCCAACTGCTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWMVSYW*ANCSSS
Trigger: AGATGAGGAGCAGTTGGCCCACCAGTACGAGACCAT...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTATGGTCTCGTACTGGTaGGCCAACTGCTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKIMVSYW*ANCSSS
Trigger: AGATGAGGAGCAGTTGGCCCACCAGTACGAGACCAT...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGATGATGGTCTCGTACTaGTGGGCCAACTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWMMVSY*WANCSS
Trigger: TGAGGAGCAGTTGGCCCACCAGTACGAGACCATCAT...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCATGATGGTCTCGTACTaGTGGGCCAACTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFMMVSY*WANCSS
Trigger: TGAGGAGCAGTTGGCCCACCAGTACGAGACCATCAT...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTAAACCTTGGGCTCTCTaGCATGAACTTCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKIKPWAL*HELQGH
Trigger: GTGGCCCTGAAGTTCATGCCAGAGAGCCCAAGGTTT...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCCTGACCAGCCAGCGCTaGTACCAGGTTCCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTLTSQR*YQVPVE
Trigger: TTCAACAGGAACCTGGTACCAGCGCTGGCTGGTCAG...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGATGCTCCAAGTCCATGTaGCAGCCCTCCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRCSKSM*QPSFCS
Trigger: GGAGCAGAAGGAGGGCTGCCACATGGACTTGGAGCA...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGAAGGCTGTTGCTCTCTaGTTGGTGGGATACAGCTCC +
Preference number: 4 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKKAVAL*LVGYSS
Trigger: GGAGCTGTATCCCACCAACCAGAGAGCAACAGCCTT...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGCTGTTCTCGAGTCTCTaGCAGTCGAAGGGCAATCAG +
Preference number: 4 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWLFSSL*QSKGNQ
Trigger: CTGATTGCCCTTCGACTGCCAGAGACTCGAGAACAG...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGCTGCCAGGGAAAATGTaGCACTTGCCCATTGAGAGC +
Preference number: 4 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKLPGKM*HLPIES
Trigger: GCTCTCAATGGGCAAGTGCCACATTTTCCCTGGCAG...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCGTAGGAGGGAACGCTaGGTTGGGGTTTACTTGTTA +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCRRRER*VGVYLL
Trigger: TAACAAGTAAACCCCAACCCAGCGTTCCCTCCTACG...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCCAAGACCCTCAATTTaGAGGAGGGGCAGCAATGTT +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCPRPSI*RRGSNV
Trigger: AACATTGCTGCCCCTCCTCCAAATTGAGGGTCTTGG...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTATAGTCACCCACATCTaGGTACTCTCACCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPIVTHI*VLSPLP
Trigger: GGGGAGAGGTGAGAGTACCCAGATGTGGGTGACTAT...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGGTAGACTATCATCCCTaGGTGGCAAATCCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSVDYHP*VANPLA
Trigger: CGCCAGCGGATTTGCCACCCAGGGATGATAGTCTAC...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545111.6
CDS-3UTR CCA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTGAGAGTCTTAGGACCTaGGTGGCAAATCCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRAESLRT*VANPLA
Trigger: CGCCAGCGGATTTGCCACCCAGGTCCTAAGACTCTC...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557410.5
CDS-3UTR TCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTCCAGCTGTTTTTCTTaGCAGGGAGCGAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTSSCFS*QGASRT
Trigger: AGTCCTGCTCGCTCCCTGTCAAGAAAAACAGCTGGA...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GGAGAATCCTCTCCCTGCCTTGGACTGGGAAGACTTGAAGTTAAACACGCAGCTCATCATGGCCTTCGGTaGCATCACTCTGTGCATCTT +
Preference number: 4 (lower is better)
Translates to: GESSPCLGLGRLEVKHAAHHGLR*HHSVHL
Trigger: AAGATGCACAGAGTGATGTCACCGAAGGCCATGATG...AGCTGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTTACCGATGCCTGAGATaGGTCGGCAGAAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFYRCLR*VGRRGR
Trigger: CCTTCCTCTTCTGCCGACTCATCTCAGGCATCGGTA...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTAGATGCCCAGCCAACTaGGGTGTTCTCCTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRARCPAN*GVLLAS
Trigger: AGAAGCGAGGAGAACACCTCAGTTGGCTGGGCATCT...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CTTGCCTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGAGATGCCCAGCCAACTaGGGTGTTCTCCTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LACKEYQRPLNTSHIVFGRCPAN*GVLLAS
Trigger: AGAAGCGAGGAGAACACCTCAGTTGGCTGGGCATCT...CCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGAAATTGGTCCCCATGCTaGAGCCCCAGCCATAGTGTG +
Preference number: 4 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRNWSPC*SPSHSV
Trigger: CACACTATGGCTGGGGCTTCAGCATGGGGACCAATT...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGGTACCAGGTTCCTGTTaGACTTTGGATCTCAATGAA +
Preference number: 4 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGVPGSC*TLDLNE
Trigger: TTCATTGAGATCCAAAGTTCAACAGGAACCTGGTAC...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTGGCTGCCCAGGAAGCTaGCGAGGTAAATCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRAGCPGS*RGKSGS
Trigger: ACTTCCTGATTTACCTCGTCAGCTTCCTGGGCAGCC...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGAGGCTGCCCAGGAAGCTaGCGAGGTAAATCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRGCPGS*RGKSGS
Trigger: ACTTCCTGATTTACCTCGTCAGCTTCCTGGGCAGCC...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTGTGGCACTTGCCCATTaGGAGCACTGCAAATCAACT +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKIVALAH*EHCKST
Trigger: AGTTGATTTGCAGTGCTCTCAATGGGCAAGTGCCAC...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAAGATGGGAATTGCCCTTaGTTGGCTAGGTGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKDGNCP*LARWLV
Trigger: AACCAGCCACCTAGCCAATCAAGGGCAATTCCCATC...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCGATGGGAATTGCCCTTaGTTGGCTAGGTGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILDGNCP*LARWLV
Trigger: AACCAGCCACCTAGCCAATCAAGGGCAATTCCCATC...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTTCACTGCAAGTGGAATaGGGCAGGAAGCAGAAACTG +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKISLQVE*GRKQKL
Trigger: CAGTTTCTGCTTCCTGCCTCATTCCACTTGCAGTGA...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGAAGGAGTGTGCTCCCATaGTCAAAGGCAGCCACTCCA +
Preference number: 4 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRRSVLP*SKAATP
Trigger: TGGAGTGGCTGCCTTTGATCATGGGAGCACACTCCT...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp ACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTAGGAGTGTGCTCCCATaGTCAAAGGCAGCCACTCCA +
Preference number: 4 (lower is better)
Translates to: TVIGRKCGCISVSWTRFSRSVLP*SKAATP
Trigger: TGGAGTGGCTGCCTTTGATCATGGGAGCACACTCCT...AGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATAGCCATCTCAGCCCATaGGGCAGCCTCAGTGATGGA +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNSHLSP*GSLSDG
Trigger: TCCATCACTGAGGCTGCCTCATGGGCTGAGATGGCT...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAACATCTAGTCATGTCTTaGTCACCCCCGTGCATCCCT +
Preference number: 4 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKHLVMS*SPPCIP
Trigger: AGGGATGCACGGGGGTGATCAAGACATGACTAGATG...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCCATCTAGTCATGTCTTaGTCACCCCCGTGCATCCCT +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILHLVMS*SPPCIP
Trigger: AGGGATGCACGGGGGTGATCAAGACATGACTAGATG...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp CTTGCCTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGTCGAGACCACTGGCCTaGCTTTCAGGGAAGAACAGG +
Preference number: 4 (lower is better)
Translates to: LACKEYQRPLNTSHIVFGSRPLA*LSGKNR
Trigger: CCTGTTCTTCCCTGAAAGTCAGGCCAGTGGTCTCGA...CCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACAGTTGCTGTGGGAATaGTTCGAGACCACTGGCCTG +
Preference number: 4 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRQLLWE*FETTGL
Trigger: CAGGCCAGTGGTCTCGAATCATTCCCACAGCAACTG...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGCAGGACTGGTCAATGTaGCATGGGACTGGGAAACGT +
Preference number: 4 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSQDWSM*HGTGKR
Trigger: ACGTTTCCCAGTCCCATGTCACATTGACCAGTCCTG...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTCTGCGACTGCCTGGTTaGCCCTTGAGCTATATCCCT +
Preference number: 4 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRALRLPG*PLSYIP
Trigger: AGGGATATAGCTCAAGGGGCAACCAGGCAGTCGCAG...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGATCCATTCCTTGGTTCTaGGACTGCCTGGTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRSIPWF*DCLVAP
Trigger: AGGGGCAACCAGGCAGTCGCAGAACCAAGGAATGGA...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCCTGGGTTGGACTCATTaGCGCGGTAATAGCCATCAC +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTLGWTH*RGNSHH
Trigger: GTGATGGCTATTACCGCGGCAATGAGTCCAACCCAG...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAACTGGGTTGGACTCATTaGCGCGGTAATAGCCATCAC +
Preference number: 4 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKLGWTH*RGNSHH
Trigger: GTGATGGCTATTACCGCGGCAATGAGTCCAACCCAG...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp ACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTTACTGGTGGGCCAACTaGTCCTCATCTTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TVIGRKCGCISVSWTRFSYWWAN*SSSSSL
Trigger: GAGGCTGGAAGATGAGGAGCAGTTGGCCCACCAGTA...AGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGATACTGGTGGGCCAACTaGTCCTCATCTTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRYWWAN*SSSSSL
Trigger: GAGGCTGGAAGATGAGGAGCAGTTGGCCCACCAGTA...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGACACATGTCCTTCTCTaGACTGGGCAGGGCAAAACT +
Preference number: 4 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWTHVLL*TGQGKT
Trigger: AGTTTTGCCCTGCCCAGTGCAGAGAAGGACATGTGT...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGACCAGGCCATGGCAGATaGGTACAGGCCCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRPGHGR*VQAPSH
Trigger: ATGACTGGGGGCCTGTACGCATCTGCCATGGCCTGG...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGCTGCCAGCCGATCATTaGAGACTCACTGTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKLPADH*RLTVAK
Trigger: TTTGGCAACAGTGAGTCTGCAATGATCGGCTGGCAG...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTCTGCCAGCCGATCATTaGAGACTCACTGTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPLPADH*RLTVAK
Trigger: TTTGGCAACAGTGAGTCTGCAATGATCGGCTGGCAG...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTCCACAGAACAGGCACTaGCAGCCGATCATTGCAGAC +
Preference number: 4 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFPQNRH*QPIIAD
Trigger: GTCTGCAATGATCGGCTGGCAGTGCCTGTTCTGTGG...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR GCA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCACAGAACAGGCACTaGCAGCCGATCATTGCAGAC +
Preference number: 4 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRPQNRH*QPIIAD
Trigger: GTCTGCAATGATCGGCTGGCAGTGCCTGTTCTGTGG...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR GCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCCAGAGCATTCCAGGCTaGAATGCTTGTCCCACAGAA +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFQSIPG*NACPTE
Trigger: TTCTGTGGGACAAGCATTGCAGCCTGGAATGCTCTG...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR GCA 90 bp GGAGAATCCTCTCCCTGCCTTGGACTGGGAAGACTTGAAGTTAAACACGCAGCTCAGAGCATTCCAGGCTaGAATGCTTGTCCCACAGAA +
Preference number: 4 (lower is better)
Translates to: GESSPCLGLGRLEVKHAAQSIPG*NACPTE
Trigger: TTCTGTGGGACAAGCATTGCAGCCTGGAATGCTCTG...AGCTGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGGGCAGGAAGTGTGGATaGATTTCAGTGTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKGRKCG*ISVSWT
Trigger: TGTCCAGGACACTGAAATGCATCCACACTTCCTGCC...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp GCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTAATTCATCCTCCCAACAGCTCCGCTGGCAGTTGTaGGTAGCTCACTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: AWIKQTAQCEFVNSSSQQLRWQL*VAHCPL
Trigger: GAGGGGACAGTGAGCTACGCACAACTGCCAGCGGAG...CTGTTGGGAGGATGAATTAACAAACTCACATTGTGCAGTCTGCTTAATCCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTTCTGCAGAGCTTGGCTaGACCCTTTACAAAGACCTG +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKISAELG*TLYKDL
Trigger: CAGGTCTTTGTAAAGGGTGCAGCCAAGCTCTGCAGA...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGAAGCCCCTTTGCCCATTaGCCTTCCTTCTGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRSPFAH*PSFCFL
Trigger: CAGGAAGCAGAAGGAAGGGCAATGGGCAAAGGGGCT...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTTTCAGGTGGACTGTCTaGAGGTCAGGTTCACATCTA +
Preference number: 4 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPFRWTV*RSGSHL
Trigger: TAGATGTGAACCTGACCTGCAGACAGTCCACCTGAA...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTAGAGCTGGGCCTAAATaGGACACAGCTACATGCAAA +
Preference number: 4 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPRAGPK*DTATCK
Trigger: TTTGCATGTAGCTGTGTCGCATTTAGGCCCAGCTCT...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCTGGAAATCTCGCTGCTaGCACAACAGCCATGCATAT +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCWKSRC*HNSHAY
Trigger: ATATGCATGGCTGTTGTGGCAGCAGCGAGATTTCCA...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCCTGGGAGGTGGAGATTaGAGCAAGCCAAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILLGGGD*SKPRLH
Trigger: GTGCAATCTTGGCTTGCTGCAATCTCCACCTCCCAG...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTGCTAATGGGTCCCTTTaGCTATCACCTGCACCCTCC +
Preference number: 4 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFANGSL*LSPAPS
Trigger: GGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGC...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTCATCTTCTTCTGGGTTaGACTCATTGCCGCGGTAAT +
Preference number: 4 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPHLLLG*THCRGN
Trigger: ATTACCGCGGCAATGAGTCCAACCCAGAAGAAGATG...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGTAGTGGCCATCAGGTCTGTCTaGCCCCGAAGGCTGTCCATT +
Preference number: 4 (lower is better)
Translates to: LQRVPEATEHISHCFWVVAIRSV*PRRLSI
Trigger: AATGGACAGCCTTCGGGGCCAGACAGACCTGATGGC...CACTACCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAATGTCCTTCTCTGCACTaGGCAGGGCAAAACTCACCA +
Preference number: 4 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKCPSLH*AGQNSP
Trigger: TGGTGAGTTTTGCCCTGCCCAGTGCAGAGAAGGACA...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCCCCAGCCATAGTGTaGGATGATGCTCCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRAPAIV*DDAPGH
Trigger: ATGGCCTGGAGCATCATCCCACACTATGGCTGGGGC...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTCTGACCAGCCAGCGCTaGTACCAGGTTCCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFLTSQR*YQVPVE
Trigger: TTCAACAGGAACCTGGTACCAGCGCTGGCTGGTCAG...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCCTGTTGCTCTCTGGTTaGTGGGATACAGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILLLLSG*WDTAPL
Trigger: CAGTGGAGCTGTATCCCACCAACCAGAGAGCAACAG...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCAAGGCTGTTGCTCTCTaGTTGGTGGGATACAGCTCC +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILKAVAL*LVGYSS
Trigger: GGAGCTGTATCCCACCAACCAGAGAGCAACAGCCTT...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTCCCTGCCTTGGACTaGGAAGACTTGAAGTTAAAC +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCLPALD*EDLKLN
Trigger: GTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAG...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGAATGGTCTCAGGGAATaGCGAGTATTTGTCACATTG +
Preference number: 4 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGNGLRE*RVFVTL
Trigger: CAATGTGACAAATACTCGCCATTCCCTGAGACCATT...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTTCCGCTCACTGCAAGTaGAATGAGGCAGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFSAHCK*NEAGSR
Trigger: TCTGCTTCCTGCCTCATTCCACTTGCAGTGAGCGGA...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCGGGAGCCACCACATTTaGAAATCCACAGCTGACAAG +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFGSHHI*KSTADK
Trigger: CTTGTCAGCTGTGGATTTCCAAATGTGGTGGCTCCC...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGCAAAGTACCACCTATTaGAAGAGTGTCAGTGCTACT +
Preference number: 4 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGQSTTY*KSVSAT
Trigger: AGTAGCACTGACACTCTTCCAATAGGTGGTACTTTG...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTATGATTCGAGACCACTaGCCTGACTTTCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPMIRDH*PDFQGR
Trigger: TCTTCCCTGAAAGTCAGGCCAGTGGTCTCGAATCAT...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CTTGCCTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGATGACTCACAGCTTGTaGCCGTGTCCTCCGCTTAGC +
Preference number: 4 (lower is better)
Translates to: LACKEYQRPLNTSHIVFGMTHSL*PCPPLS
Trigger: GCTAAGCGGAGGACACGGCCACAAGCTGTGAGTCAT...CCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGGGGTGGCAAATCCGCTaGCGGCCGCCTCCGGATGCA +
Preference number: 4 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWGWQIR*RPPPDA
Trigger: TGCATCCGGAGGCGGCCGCCAGCGGATTTGCCACCC...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGTCCTCTGGTCATCTCTaGGCAGCATTCCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWSSGHL*AAFLPS
Trigger: AGAAGGAAGGAATGCTGCCCAGAGATGACCAGAGGA...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557410.5
CDS-3UTR TCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCCATCATGGCCTTCGGTaGCATCACTCTGTGCATCTT +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTHHGLR*HHSVHL
Trigger: AAGATGCACAGAGTGATGTCACCGAAGGCCATGATG...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTTTGACATCATCTGGGTaGGGGATACCCTGGTACTCG +
Preference number: 4 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFLTSSG*GIPWYS
Trigger: CGAGTACCAGGGTATCCCTCACCCAGATGATGTCAA...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGATACCGATGCCTGAGATaGGTCGGCAGAAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRYRCLR*VGRRGR
Trigger: CCTTCCTCTTCTGCCGACTCATCTCAGGCATCGGTA...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGTAGTGAATTGGTCCCCATGCTaGAGCCCCAGCCATAGTGTG +
Preference number: 4 (lower is better)
Translates to: LQRVPEATEHISHCFWVVNWSPC*SPSHSV
Trigger: CACACTATGGCTGGGGCTTCAGCATGGGGACCAATT...CACTACCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTGCAGAGCACAGACGATaGCAAACACTCTCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFAEHRR*QTLSSY
Trigger: ATAGCTGGAGAGTGTTTGTCATCGTCTGTGCTCTGC...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTCCATGTTGGTGGATCTaGTTTTCCATCGTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPPCWWI*FSIVKL
Trigger: CAACTTCACGATGGAAAATCAGATCCACCAACATGG...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTGAACCTGGGTGTTTCTaGCCCTCTAATTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPEPGCF*PSNSFS
Trigger: TGAAAAGGAATTAGAGGGTCAGAAACACCCAGGTTC...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCGAACCTGGGTGTTTCTaGCCCTCTAATTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCEPGCF*PSNSFS
Trigger: TGAAAAGGAATTAGAGGGTCAGAAACACCCAGGTTC...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGGTGGCACTTGCCCATTaGGAGCACTGCAAATCAACT +
Preference number: 4 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSVALAH*EHCKST
Trigger: AGTTGATTTGCAGTGCTCTCAATGGGCAAGTGCCAC...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGCCCTTTACAAAGACCTaGGTGATGGATGAGATGGGA +
Preference number: 4 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKPFTKT*VMDEMG
Trigger: TCCCATCTCATCCATCACTCAGGTCTTTGTAAAGGG...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTTTATCTCAGCAGGAGTaGCGGCATTTAAGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPLSQQE*RHLRSS
Trigger: GCTACTTCTTAAATGCCGTCACTCCTGCTGAGATAA...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTTACATTGTCCCCCAGTaGCCTGCCACAGAGACTATT +
Preference number: 4 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFYIVPQ*PATETI
Trigger: AATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTA...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTCCCCAGAACTGTCATaGGAGCATCACCTTAGGCCT +
Preference number: 4 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRASPELS*EHHLRP
Trigger: AGGCCTAAGGTGATGCTCTCATGACAGTTCTGGGGA...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGCAAGGGAATAGTCAATaGATGGTCTCAGGGAATGGC +
Preference number: 4 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKQGNSQ*MVSGNG
Trigger: GCCATTCCCTGAGACCATTCATTGACTATTCCCTTG...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GGAGAATCCTCTCCCTGCCTTGGACTGGGAAGACTTGAAGTTAAACACGCAGCTCAAGGGAATAGTCAATaGATGGTCTCAGGGAATGGC +
Preference number: 4 (lower is better)
Translates to: GESSPCLGLGRLEVKHAAQGNSQ*MVSGNG
Trigger: GCCATTCCCTGAGACCATTCATTGACTATTCCCTTG...AGCTGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCGCAATAGAACTTCCCTaGCAAGTCAAAGTACCACCT +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCAIELP*QVKVPP
Trigger: AGGTGGTACTTTGACTTGTCAGGGAAGTTCTATTGC...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GGAGAATCCTCTCCCTGCCTTGGACTGGGAAGACTTGAAGTTAAACACGCAGCTCATAAGGACAGGACCTaGGTGAAACCAAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: GESSPCLGLGRLEVKHAAHKDRT*VKPSSF
Trigger: GAAACTGCTTGGTTTCACTCAGGTCCTGTCCTTATG...AGCTGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTCTGGGTTGGACTCATTaGCGCGGTAATAGCCATCAC +
Preference number: 4 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFLGWTH*RGNSHH
Trigger: GTGATGGCTATTACCGCGGCAATGAGTCCAACCCAG...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTAAGGCTCCATATCCCTaGACGAAGGAAGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPKAPYP*TKEERE
Trigger: CTCCCTCTCTTCCTTCGTGCAGGGATATGGAGCCTT...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR GCA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAACTGCCAGCCGATCATTaGAGACTCACTGTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKLPADH*RLTVAK
Trigger: TTTGGCAACAGTGAGTCTGCAATGATCGGCTGGCAG...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGACAACTTCTCCTCCCGTaGTATCCAAGGTGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRQLLLP*YPRCPP
Trigger: CGGAGGACACCTTGGATAGCACGGGAGGAGAAGTTG...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTCTCCGCTGGCAGTTGTaGGTAGCTCACTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVLRWQL*VAHCPL
Trigger: GAGGGGACAGTGAGCTACGCACAACTGCCAGCGGAG...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATCAAACAACTAGTTCTTaGAGGCTGATGTTCATCCGG +
Preference number: 4 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYQTTSS*RLMFIR
Trigger: CCGGATGAACATCAGCCTGCAAGAACTAGTTGTTTG...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGGGAAAATGTGGCACTTaGCCATTGAGAGCACTGCAA +
Preference number: 4 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWGKCGT*PLRALQ
Trigger: TTGCAGTGCTCTCAATGGGCAAGTGCCACATTTTCC...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTTCCCATTCCCCAAACTaGAGGCTTCCCCAGAACTGT +
Preference number: 4 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFSHSPN*RLPQNC
Trigger: ACAGTTCTGGGGAAGCCTGCAGTTTGGGGAATGGGA...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTGGATGTGAGGTTCAGTaGTTCAACAGCCATCTCAGC +
Preference number: 4 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFGCEVQ*FNSHLS
Trigger: GCTGAGATGGCTGTTGAAGCACTGAACCTCACATCC...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCGGATGTGAGGTTCAGTaGTTCAACAGCCATCTCAGC +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILGCEVQ*FNSHLS
Trigger: GCTGAGATGGCTGTTGAAGCACTGAACCTCACATCC...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCCATTGCCCTTCCTTCTaGTTCCTGCCTGAATTGTGG +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTHCPSF*FLPELW
Trigger: CCACAATTCAGGCAGGAAGCAGAAGGAAGGGCAATG...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAAAGGCACAGCCCCTTTaGCCATTGCCCTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRKAQPL*PLPFLL
Trigger: CAGAAGGAAGGGCAATGGGCAAAGGGGCTGTGCCTT...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGAAATACTTCAAGCCCTaGAACCAGACACAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWKYFKP*NQTQAH
Trigger: ATGGGCCTGTGTCTGGTTGCAGGGCTTGAAGTATTT...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GGAGAATCCTCTCCCTGCCTTGGACTGGGAAGACTTGAAGTTAAACACGCAGCTTTCAGGTGGACTGTCTaGAGGTCAGGTTCACATCTA +
Preference number: 4 (lower is better)
Translates to: GESSPCLGLGRLEVKHAAFRWTV*RSGSHL
Trigger: TAGATGTGAACCTGACCTGCAGACAGTCCACCTGAA...AGCTGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CTTGCCTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGGGTTCTGCGACTGCCTaGTTGCCCCTTGAGCTATAT +
Preference number: 4 (lower is better)
Translates to: LACKEYQRPLNTSHIVFGGSATA*LPLELY
Trigger: ATATAGCTCAAGGGGCAACCAGGCAGTCGCAGAACC...CCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTGGTTCTGCGACTGCCTaGTTGCCCCTTGAGCTATAT +
Preference number: 4 (lower is better)
Translates to: TVIGRKCGCISVSWTRFSGSATA*LPLELY
Trigger: ATATAGCTCAAGGGGCAACCAGGCAGTCGCAGAACC...AGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCGGTAATAGCCATCACTaGGAGCATAGCCCCCATAAT +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFGNSHH*EHSPHN
Trigger: ATTATGGGGGCTATGCTCCCAGTGATGGCTATTACC...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGCATCTTCTTCTGGGTTaGACTCATTGCCGCGGTAAT +
Preference number: 4 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKHLLLG*THCRGN
Trigger: ATTACCGCGGCAATGAGTCCAACCCAGAAGAAGATG...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGTCCTTCTCTGCACTaGGCAGGGCAAAACTCACCA +
Preference number: 4 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRACPSLH*AGQNSP
Trigger: TGGTGAGTTTTGCCCTGCCCAGTGCAGAGAAGGACA...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGAGCCCCAGCCATAGTGTaGGATGATGCTCCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRAPAIV*DDAPGH
Trigger: ATGGCCTGGAGCATCATCCCACACTATGGCTGGGGC...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTAAGGCTGTTGCTCTCTaGTTGGTGGGATACAGCTCC +
Preference number: 4 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPKAVAL*LVGYSS
Trigger: GGAGCTGTATCCCACCAACCAGAGAGCAACAGCCTT...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCCAAAAGAAGCAAAGATaGTGTTTCCCAGGATGGCGC +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFQKKQR*CFPGWR
Trigger: GCGCCATCCTGGGAAACACCATCTTTGCTTCTTTTG...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTCTGTTCTCGAGTCTCTaGCAGTCGAAGGGCAATCAG +
Preference number: 4 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFLFSSL*QSKGNQ
Trigger: CTGATTGCCCTTCGACTGCCAGAGACTCGAGAACAG...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCCCTGCCTTGGACTaGGAAGACTTGAAGTTAAAC +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKILPALD*EDLKLN
Trigger: GTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAG...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTCTCCAAGGAGCTTTCTaGAGGAACCTGGGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFLQGAF*RNLGVS
Trigger: AGAAACACCCAGGTTCCTCCAGAAAGCTCCTTGGAG...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATGGAATAGTCAATGAATaGTCTCAGGGAATGGCGAGT +
Preference number: 4 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYGIVNE*SQGMAS
Trigger: ACTCGCCATTCCCTGAGACCATTCATTGACTATTCC...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGAGCTTGGCAGAGAGACTaGCCCATGGTCAGGGCTCAA +
Preference number: 4 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRAWQRD*PMVRAQ
Trigger: TTGAGCCCTGACCATGGGCCAGTCTCTCTGCCAAGC...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTACCATTCCGGGAGCGTaGTGTTGTAGCGGACATTAC +
Preference number: 4 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPTIPGA*CCSGHY
Trigger: GTAATGTCCGCTACAACACCACGCTCCCGGAATGGT...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAATGACTCACAGCTTGTaGCCGTGTCCTCCGCTTAGC +
Preference number: 4 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRMTHSL*PCPPLS
Trigger: GCTAAGCGGAGGACACGGCCACAAGCTGTGAGTCAT...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATACGGTAAGCTCTATCTaGTCAGTTGCCAGTCATTGT +
Preference number: 4 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYTVSSI*SVASHC
Trigger: ACAATGACTGGCAACTGACCAGATAGAGCTTACCGT...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCACGGTAAGCTCTATCTaGTCAGTTGCCAGTCATTGT +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCTVSSI*SVASHC
Trigger: ACAATGACTGGCAACTGACCAGATAGAGCTTACCGT...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CAA 72 bp ATGAATGGTCTCAGGGAATGGCGAGTATTTGTCACATaGTCCCATTCCCCAAACTGCAGGCTTCCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: MNGLREWRVFVT*SHSPNCRLPQN
Trigger: GTTCTGGGGAAGCCTGCAGTTTGGGGAATGGGACAATGTGACAAATACTCGCCATTCCCTGAGACCATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTCATCATGGCCTTCGGTaGCATCACTCTGTGCATCTT +
Preference number: 4 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRAHHGLR*HHSVHL
Trigger: AAGATGCACAGAGTGATGTCACCGAAGGCCATGATG...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATTTGACATCATCTGGGTaGGGGATACCCTGGTACTCG +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNLTSSG*GIPWYS
Trigger: CGAGTACCAGGGTATCCCTCACCCAGATGATGTCAA...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTAATTCATCCTCCCAACAGCCCAATACCGATGCCTaGGATGAGTCGGCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: AWIKQTAQCEFVNSSSQQPNTDA*DESAEE
Trigger: CTCTTCTGCCGACTCATCTCAGGCATCGGTATTGGG...CTGTTGGGAGGATGAATTAACAAACTCACATTGTGCAGTCTGCTTAATCCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp ACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTGCAGAGCACAGACGATaGCAAACACTCTCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: TVIGRKCGCISVSWTRFSAEHRR*QTLSSY
Trigger: ATAGCTGGAGAGTGTTTGTCATCGTCTGTGCTCTGC...AGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GGAGAATCCTCTCCCTGCCTTGGACTGGGAAGACTTGAAGTTAAACACGCAGCTTGTCATGGACTTGCTTaGGAATCATCCAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GESSPCLGLGRLEVKHAACHGLA*ESSRLH
Trigger: ATGAAGCCTGGATGATTCTCAAGCAAGTCCATGACA...AGCTGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGAACTTTGGATCTCAATaGATTCATCCATTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGNFGSQ*IHPFAW
Trigger: CCAAGCAAATGGATGAATTCATTGAGATCCAAAGTT...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCCCATGTTGGTGGATCTaGTTTTCCATCGTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFPCWWI*FSIVKL
Trigger: CAACTTCACGATGGAAAATCAGATCCACCAACATGG...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTAGCCACCAATCATCTTaGGCCTTCCAATTCTATCCA +
Preference number: 4 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPSHQSS*AFQFYP
Trigger: TGGATAGAATTGGAAGGCTCAAGATGATTGGTGGCT...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTGATACAGCTCCACTGTaGTCACATCCAGAGCATTCC +
Preference number: 4 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFDTAPL*SHPEHS
Trigger: GGAATGCTCTGGATGTGATCACAGTGGAGCTGTATC...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGAGATACAGCTCCACTGTaGTCACATCCAGAGCATTCC +
Preference number: 4 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRDTAPL*SHPEHS
Trigger: GGAATGCTCTGGATGTGATCACAGTGGAGCTGTATC...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTTGCTTGCATTTCATTTaGTCAGACCTCATTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPCLHFI*SDLISW
Trigger: CCAGGAAATGAGGTCTGATCAAATGAAATGCAAGCA...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGTTATCTCAGCAGGAGTaGCGGCATTTAAGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKLSQQE*RHLRSS
Trigger: GCTACTTCTTAAATGCCGTCACTCCTGCTGAGATAA...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTAATTCATCCTCCCAACAGCAGTTGCTGTGGGAATaGTTCGAGACCACTGGCCTG +
Preference number: 4 (lower is better)
Translates to: AWIKQTAQCEFVNSSSQQQLLWE*FETTGL
Trigger: CAGGCCAGTGGTCTCGAATCATTCCCACAGCAACTG...CTGTTGGGAGGATGAATTAACAAACTCACATTGTGCAGTCTGCTTAATCCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp ACTTCCCTGACAAGTCAAAGTACCACCTATTGGAAGAGTGTCAGTGCTACTCAAACTTGGCAGACTGCGTaGTGGCCTGATTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: TSLTSQSTTYWKSVSATQTWQTA*WPDLSC
Trigger: GCAGGACAAATCAGGCCAGCACGCAGTCTGCCAAGT...TTGAGTAGCACTGACACTCTTCCAATAGGTGGTACTTTGACTTGTCAGGGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGAACACATGTCCTTCTCTaGACTGGGCAGGGCAAAACT +
Preference number: 4 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRTHVLL*TGQGKT
Trigger: AGTTTTGCCCTGCCCAGTGCAGAGAAGGACATGTGT...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGAGGCTTCATCATGTTTaGCCATCTCTAGCAGAAACC +
Preference number: 4 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKRLHHV*PSLAET
Trigger: GGTTTCTGCTAGAGATGGGCAAACATGATGAAGCCT...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTCTGCCAGCCGATCATTaGAGACTCACTGTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPLPADH*RLTVAK
Trigger: TTTGGCAACAGTGAGTCTGCAATGATCGGCTGGCAG...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR GCA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGACATTCCAGGCTGCAATaGTTGTCCCACAGAACAGGC +
Preference number: 4 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRHSRLQ*LSHRTG
Trigger: GCCTGTTCTGTGGGACAAGCATTGCAGCCTGGAATG...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATCATTCCAGGCTGCAATaGTTGTCCCACAGAACAGGC +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNHSRLQ*LSHRTG
Trigger: GCCTGTTCTGTGGGACAAGCATTGCAGCCTGGAATG...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGAGGCAGGAAGTGTGGATaGATTTCAGTGTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRGRKCG*ISVSWT
Trigger: TGTCCAGGACACTGAAATGCATCCACACTTCCTGCC...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR GCA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTCCTCGCATAGTGTGTaGACTCACTGGAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPSSHSV*THWRIL
Trigger: GAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAATTTTGGAAATCTCGCTaGTGCCACAACAGCCATGCA +
Preference number: 4 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKFWKSR*CHNSHA
Trigger: TGCATGGCTGTTGTGGCAGCAGCGAGATTTCCAAAA...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGTTAATCCTTCAGAATTaGTCTTTGGAGCCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGLILQN*SLEPKD
Trigger: ATCTTTGGGCTCCAAAGAGCAATTCTGAAGGATTAA...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATCACTTTTGTAGCAGTTaGTGTGGGAATGATTCGAGA +
Preference number: 4 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYHFCSS*CGNDSR
Trigger: TCTCGAATCATTCCCACAGCAACTGCTACAAAAGTG...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAATTACAGTTCTTAGAGTaGTTCACAGGACCGCACACC +
Preference number: 4 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKLQFLE*FTGPHT
Trigger: GGTGTGCGGTCCTGTGAAGCACTCTAAGAACTGTAA...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCTGTCTGTTGGAAGTCTaGAAAGTTTCAAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCCLLEV*KVSSSG
Trigger: ACCAGAGCTTGAAACTTTCCAGACTTCCAACAGACA...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATGCACTCGATGTCTGTTaGAAGTCTGGAAAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYALDVC*KSGKFQ
Trigger: TTGAAACTTTCCAGACTTCCAACAGACATCGAGTGC...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTGGTAATAGCCATCACTaGGAGCATAGCCCCCATAAT +
Preference number: 4 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFGNSHH*EHSPHN
Trigger: ATTATGGGGGCTATGCTCCCAGTGATGGCTATTACC...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGTAGTGCTGTGCATCTTCTTCTaGGTTGGACTCATTGCCGCG +
Preference number: 4 (lower is better)
Translates to: LQRVPEATEHISHCFWVVLCIFF*VGLIAA
Trigger: CGCGGCAATGAGTCCAACCCAGAAGAAGATGCACAG...CACTACCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATCTGTGCATCTTCTTCTaGGTTGGACTCATTGCCGCG +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNLCIFF*VGLIAA
Trigger: CGCGGCAATGAGTCCAACCCAGAAGAAGATGCACAG...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGTAGTGGGCCTTGACATCATCTaGGTGAGGGATACCCTGGTA +
Preference number: 4 (lower is better)
Translates to: LQRVPEATEHISHCFWVVGLDII*VRDTLV
Trigger: TACCAGGGTATCCCTCACCCAGATGATGTCAAGGCC...CACTACCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTGCCATCAGGTCTGTCTaGCCCCGAAGGCTGTCCATT +
Preference number: 4 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVAIRSV*PRRLSI
Trigger: AATGGACAGCCTTCGGGGCCAGACAGACCTGATGGC...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATAAAAAGAGGATCCACTaGAAGCGGCCATGGCCACAC +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNKKRIH*KRPWPH
Trigger: GTGTGGCCATGGCCGCTTCCAGTGGATCCTCTTTTT...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGTAGTGCTGTTGCTCTCTGGTTaGTGGGATACAGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: LQRVPEATEHISHCFWVVLLLSG*WDTAPL
Trigger: CAGTGGAGCTGTATCCCACCAACCAGAGAGCAACAG...CACTACCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTGGTGTTTCCCAGGATaGCGCCAAATTTGCATAATC +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFWCFPG*RQICII
Trigger: GATTATGCAAATTTGGCGCCATCCTGGGAAACACCA...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGTGGTGTTTCCCAGGATaGCGCCAAATTTGCATAATC +
Preference number: 4 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWWCFPG*RQICII
Trigger: GATTATGCAAATTTGGCGCCATCCTGGGAAACACCA...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGCAAAAGAAGCAAAGATaGTGTTTCCCAGGATGGCGC +
Preference number: 4 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSQKKQR*CFPGWR
Trigger: GCGCCATCCTGGGAAACACCATCTTTGCTTCTTTTG...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCCAAAAGAAGCAAAGATaGTGTTTCCCAGGATGGCGC +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILQKKQR*CFPGWR
Trigger: GCGCCATCCTGGGAAACACCATCTTTGCTTCTTTTG...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCGGATGGGGACCACTTTaGTTATCCCAACAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFGWGPL*LSQQKK
Trigger: CTTCTTTTGTTGGGATAACCAAAGTGGTCCCCATCC...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTGGAATTGCCCTTGATTaGCTAGGTGGCTGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKIGIALD*LGGWFK
Trigger: TTTAAACCAGCCACCTAGCCAATCAAGGGCAATTCC...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGGGAATTGCCCTTGATTaGCTAGGTGGCTGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWGIALD*LGGWFK
Trigger: TTTAAACCAGCCACCTAGCCAATCAAGGGCAATTCC...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTAAAGTCTGCAGAGCTTaGCTGCACCCTTTACAAAGA +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKIKVCRA*LHPLQR
Trigger: TCTTTGTAAAGGGTGCAGCCAAGCTCTGCAGACTTT...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCAAAGTCTGCAGAGCTTaGCTGCACCCTTTACAAAGA +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFKVCRA*LHPLQR
Trigger: TCTTTGTAAAGGGTGCAGCCAAGCTCTGCAGACTTT...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGAGGGAGCCACCACATTTaGAAATCCACAGCTGACAAG +
Preference number: 4 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRGSHHI*KSTADK
Trigger: CTTGTCAGCTGTGGATTTCCAAATGTGGTGGCTCCC...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ACTTCCCTGACAAGTCAAAGTACCACCTATTGGAAGAGTGTCAGTGCTACTCAACAGCCACTCCAGCCCTaGCTTTCCTTCCTCCAGATT +
Preference number: 4 (lower is better)
Translates to: TSLTSQSTTYWKSVSATQQPLQP*LSFLQI
Trigger: AATCTGGAGGAAGGAAAGCCAGGGCTGGAGTGGCTG...TTGAGTAGCACTGACACTCTTCCAATAGGTGGTACTTTGACTTGTCAGGGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTCCAAGACCCTCAATTTaGAGGAGGGGCAGCAATGTT +
Preference number: 4 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRAPRPSI*RRGSNV
Trigger: AACATTGCTGCCCCTCCTCCAAATTGAGGGTCTTGG...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCTTCACCAGGTGGAAATaGCCAAAACAAAGATCACCA +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCFTRWK*PKQRSP
Trigger: TGGTGATCTTTGTTTTGGCCATTTCCACCTGGTGAA...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp AAGCCCAATCTTCATATAATGACTCTAACTTCCAGCCAAGTTGATTTGTTAAGTGGGTGGCAAATCCGCTaGCGGCCGCCTCCGGATGCA +
Preference number: 4 (lower is better)
Translates to: KPNLHIMTLTSSQVDLLSGWQIR*RPPPDA
Trigger: TGCATCCGGAGGCGGCCGCCAGCGGATTTGCCACCC...ACTTAACAAATCAACTTGGCTGGAAGTTAGAGTCATTATATGAAGATTGGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACAATTGGTCCCCATGCTaGAGCCCCAGCCATAGTGTG +
Preference number: 4 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHNWSPC*SPSHSV
Trigger: CACACTATGGCTGGGGCTTCAGCATGGGGACCAATT...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCAGAGCACAGACGATaGCAAACACTCTCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRAEHRR*QTLSSY
Trigger: ATAGCTGGAGAGTGTTTGTCATCGTCTGTGCTCTGC...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTGTACCAGGTTCCTGTTaGACTTTGGATCTCAATGAA +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKIVPGSC*TLDLNE
Trigger: TTCATTGAGATCCAAAGTTCAACAGGAACCTGGTAC...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGTCAGTCCATAGTAACTaGATGCCATGGCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWSVHSN*MPWQTK
Trigger: TTTGGTTTGCCATGGCATTCAGTTACTATGGACTGA...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GGAGAATCCTCTCCCTGCCTTGGACTGGGAAGACTTGAAGTTAAACACGCAGCTTCAGTCCATAGTAACTaGATGCCATGGCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: GESSPCLGLGRLEVKHAASVHSN*MPWQTK
Trigger: TTTGGTTTGCCATGGCATTCAGTTACTATGGACTGA...AGCTGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCCCATGTTGGTGGATCTaGTTTTCCATCGTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILPCWWI*FSIVKL
Trigger: CAACTTCACGATGGAAAATCAGATCCACCAACATGG...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGCCATGTTGGTGGATCTaGTTTTCCATCGTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSPCWWI*FSIVKL
Trigger: CAACTTCACGATGGAAAATCAGATCCACCAACATGG...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCAGCCACCAATCATCTTaGGCCTTCCAATTCTATCCA +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILSHQSS*AFQFYP
Trigger: TGGATAGAATTGGAAGGCTCAAGATGATTGGTGGCT...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGATACAGCTCCACTGTaGTCACATCCAGAGCATTCC +
Preference number: 4 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRDTAPL*SHPEHS
Trigger: GGAATGCTCTGGATGTGATCACAGTGGAGCTGTATC...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGATTTGCATAATCCATTaGGAATGCCGAAGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWICIIH*ECRRLL
Trigger: CAACAGCCTTCGGCATTCTCAATGGATTATGCAAAT...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCATTTGCATAATCCATTaGGAATGCCGAAGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFICIIH*ECRRLL
Trigger: CAACAGCCTTCGGCATTCTCAATGGATTATGCAAAT...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTGAGTTACAAACATATTaGCAGCTGAAGTGGGTCCTA +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKIELQTY*QLKWVL
Trigger: TAGGACCCACTTCAGCTGTCAATATGTTTGTAACTC...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCGAGTTACAAACATATTaGCAGCTGAAGTGGGTCCTA +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFELQTY*QLKWVL
Trigger: TAGGACCCACTTCAGCTGTCAATATGTTTGTAACTC...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTGAACCTGGGTGTTTCTaGCCCTCTAATTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFEPGCF*PSNSFS
Trigger: TGAAAAGGAATTAGAGGGTCAGAAACACCCAGGTTC...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGAACTTCCAGCCAAGTTaGTTTGTTAAGTTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKNFQPS*FVKLLG
Trigger: GCCCAACAACTTAACAAATCAACTTGGCTGGAAGTT...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTAACTTCCAGCCAAGTTaGTTTGTTAAGTTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKINFQPS*FVKLLG
Trigger: GCCCAACAACTTAACAAATCAACTTGGCTGGAAGTT...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GGAGAATCCTCTCCCTGCCTTGGACTGGGAAGACTTGAAGTTAAACACGCAGCTATCAGCATCAGGAGATaGCACAATACAGTTGAGACT +
Preference number: 4 (lower is better)
Translates to: GESSPCLGLGRLEVKHAAISIRR*HNTVET
Trigger: AGTCTCAACTGTATTGTGTCATCTCCTGATGCTGAT...AGCTGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCTACATGACCTCAGGATaGTGTACTACAAACTTCACA +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCYMTSG*CTTNFT
Trigger: TGTGAAGTTTGTAGTACATCATCCTGAGGTCATGTA...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGAGGAACGTGCGCCCATaGTCAGGCAGGAGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWRNVRP*SGRSVL
Trigger: GAGCACACTCCTGCCTGATCATGGGCGCACGTTCCT...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTAAAAATCAAGGAGTCTaGAGGCAGAAGGAGCGTGCT +
Preference number: 4 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFKNQGV*RQKERA
Trigger: AGCACGCTCCTTCTGCCTTCAGACTCCTTGATTTTT...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCGCAATAGAACTTCCCTaGCAAGTCAAAGTACCACCT +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTAIELP*QVKVPP
Trigger: AGGTGGTACTTTGACTTGTCAGGGAAGTTCTATTGC...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCATCATAAGGCACAATaGATTACAGGATGCCACAAG +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKIHHKAQ*ITGCHK
Trigger: CTTGTGGCATCCTGTAATTCATTGTGCCTTATGATG...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp CTTGCCTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGAATGGCTCATCCTCCTaGGTGACAGTAGCTGTGATT +
Preference number: 4 (lower is better)
Translates to: LACKEYQRPLNTSHIVFGNGSSS*VTVAVI
Trigger: AATCACAGCTACTGTCACTCAGGAGGATGAGCCATT...CCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTAATGTTTGGCCCATTTaGAATGTGGCAAAACTGCCA +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKINVWPI*NVAKLP
Trigger: TGGCAGTTTTGCCACATTTCAAATGGGCCAAACATT...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp ACTTCCCTGACAAGTCAAAGTACCACCTATTGGAAGAGTGTCAGTGCTACTCAACAGGACTGGTCAATGTaGCATGGGACTGGGAAACGT +
Preference number: 4 (lower is better)
Translates to: TSLTSQSTTYWKSVSATQQDWSM*HGTGKR
Trigger: ACGTTTCCCAGTCCCATGTCACATTGACCAGTCCTG...TTGAGTAGCACTGACACTCTTCCAATAGGTGGTACTTTGACTTGTCAGGGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGTTGGCCTTTGACAAGTaGCTTTCCTGTGTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSLAFDK*LSCVPV
Trigger: AACTGGAACACAGGAAAGTCACTTGTCAAAGGCCAA...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS-3UTR TCA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATACTCTGAAAACAGGTTaGGCATTCCAAATCCAAATC +
Preference number: 4 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYTLKTG*AFQIQI
Trigger: GATTTGGATTTGGAATGCTCAACCTGTTTTCAGAGT...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS-3UTR GCA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTGGTGACATCACTCTGTaGATCTTCTTCTGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPGDITL*IFFWVG
Trigger: TCCAACCCAGAAGAAGATGCACAGAGTGATGTCACC...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAACACATGTCCTTCTCTaGACTGGGCAGGGCAAAACT +
Preference number: 4 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRTHVLL*TGQGKT
Trigger: AGTTTTGCCCTGCCCAGTGCAGAGAAGGACATGTGT...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCCCAGGCCATGGCAGATaGGTACAGGCCCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLAPGHGR*VQAPSH
Trigger: ATGACTGGGGGCCTGTACGCATCTGCCATGGCCTGG...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAAAGGCTTCATCATGTTTaGCCATCTCTAGCAGAAACC +
Preference number: 4 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKRLHHV*PSLAET
Trigger: GGTTTCTGCTAGAGATGGGCAAACATGATGAAGCCT...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGATGAATTCATCCATTTaGTTGGGAGTTTTGATGTTG +
Preference number: 4 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGMNSSI*LGVLML
Trigger: CAACATCAAAACTCCCAAGCAAATGGATGAATTCAT...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTAGGAAGTCATTATCTTaGTCCAAGTCCATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFRKSLS*SKSMWQ
Trigger: CTGCCACATGGACTTGGAGCAAGATAATGACTTCCT...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATCAGAGCATTCCAGGCTaGAATGCTTGTCCCACAGAA +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNQSIPG*NACPTE
Trigger: TTCTGTGGGACAAGCATTGCAGCCTGGAATGCTCTG...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGGCAGGAAGTGTGGATaGATTTCAGTGTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRGRKCG*ISVSWT
Trigger: TGTCCAGGACACTGAAATGCATCCACACTTCCTGCC...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTCAACTTCTCCTCCCGTaGTATCCAAGGTGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVQLLLP*YPRCPP
Trigger: CGGAGGACACCTTGGATAGCACGGGAGGAGAAGTTG...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGATCTGCAGAGCTTGGCTaGACCCTTTACAAAGACCTG +
Preference number: 4 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRSAELG*TLYKDL
Trigger: CAGGTCTTTGTAAAGGGTGCAGCCAAGCTCTGCAGA...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATAATCCTGCAAAAGTCTaGAGAGCTTGGCTGCACCCT +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNNPAKV*RAWLHP
Trigger: AGGGTGCAGCCAAGCTCTGCAGACTTTTGCAGGATT...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGACACCAATGTCCCTCTTaGATTCCTGGCCCCTATCTC +
Preference number: 4 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRHQCPS*IPGPYL
Trigger: GAGATAGGGGCCAGGAATGCAAGAGGGACATTGGTG...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTTTGGGTTACTGTTaGACTACCACTAGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYFLGYC*TTTSCL
Trigger: GAGACAACTAGTGGTAGTGCAACAGTAACCCAAAAA...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCTCCTCACCATGCCTCTaGAAATCAAACAAAATGTAC +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCSSPCL*KSNKMY
Trigger: GTACATTTTGTTTGATTTGCAGAGGCATGGTGAGGA...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTACAGTTCTTAGAGTaGTTCACAGGACCGCACACC +
Preference number: 4 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPLQFLE*FTGPHT
Trigger: GGTGTGCGGTCCTGTGAAGCACTCTAAGAACTGTAA...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACGCTAATGGGTCCCTTTaGCTATCACCTGCACCCTCC +
Preference number: 4 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHANGSL*LSPAPS
Trigger: GGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGC...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACTGCCACCGAAGGTTATaGTCTGGGTGGCAAATCCGC +
Preference number: 4 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHCHRRL*SGWQIR
Trigger: GCGGATTTGCCACCCAGAGCATAACCTTCGGTGGCA...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS-3UTR CCA 90 bp ACTTCCCTGACAAGTCAAAGTACCACCTATTGGAAGAGTGTCAGTGCTACTCAAAGTGTGTGCACTCACTaGAGAATCCTCTCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: TSLTSQSTTYWKSVSATQSVCTH*RILSLP
Trigger: AGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACT...TTGAGTAGCACTGACACTCTTCCAATAGGTGGTACTTTGACTTGTCAGGGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTCAGACCTCATTTCCTaGGACCTCAAACACCAAGTT +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTSDLIS*DLKHQV
Trigger: AACTTGGTGTTTGAGGTCCCAGGAAATGAGGTCTGA...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGCATTTGGAAGAACTGTaGCTACACTTCCCCATCCTT +
Preference number: 4 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSHLEEL*LHFPIL
Trigger: AAGGATGGGGAAGTGTAGCCACAGTTCTTCCAAATG...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GGAGAATCCTCTCCCTGCCTTGGACTGGGAAGACTTGAAGTTAAACACGCAGCTGCAGAAGTGAGATCTTaGAAACCAAATGGAGTTAGC +
Preference number: 4 (lower is better)
Translates to: GESSPCLGLGRLEVKHAAAEVRS*KPNGVS
Trigger: GCTAACTCCATTTGGTTTCCAAGATCTCACTTCTGC...AGCTGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGAAAGTCTGCAGAGCTTaGCTGCACCCTTTACAAAGA +
Preference number: 4 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSKVCRA*LHPLQR
Trigger: TCTTTGTAAAGGGTGCAGCCAAGCTCTGCAGACTTT...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGGAAGTGAAAAAGAAGTaGATGGCCAGAATGCTGTAC +
Preference number: 4 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKEVKKK*MARMLY
Trigger: GTACAGCATTCTGGCCATCCACTTCTTTTTCACTTC...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTAATTCATCCTCCCAACAGTCCGCTCACTGCAAGTaGAATGAGGCAGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: AWIKQTAQCEFVNSSSQQSAHCK*NEAGSR
Trigger: TCTGCTTCCTGCCTCATTCCACTTGCAGTGAGCGGA...CTGTTGGGAGGATGAATTAACAAACTCACATTGTGCAGTCTGCTTAATCCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACAGCCAGATGTGGAAGTaGAGACACCTTTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHSQMWK*RHLSQG
Trigger: GCCCTGGGAAAGGTGTCTCCACTTCCACATCTGGCT...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTTCACCAGGTGGAAATaGCCAAAACAAAGATCACCA +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFFTRWK*PKQRSP
Trigger: TGGTGATCTTTGTTTTGGCCATTTCCACCTGGTGAA...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGCATCATTCATCTTTTTaGAAATCTCGCTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKHHSSF*KSRCCH
Trigger: GTGGCAGCAGCGAGATTTCCAAAAAGATGAATGATG...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTATGGTAGGTAAGAAGTaGAGGACAGGGCCACCATTT +
Preference number: 4 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRAMVGKK*RTGPPF
Trigger: AAATGGTGGCCCTGTCCTCCACTTCTTACCTACCAT...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTATGATTCGAGACCACTaGCCTGACTTTCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPMIRDH*PDFQGR
Trigger: TCTTCCCTGAAAGTCAGGCCAGTGGTCTCGAATCAT...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTAACATCTTCCTCCACTaGCTACATGTCAGCACATTT +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKINIFLH*LHVSTF
Trigger: AAATGTGCTGACATGTAGCCAGTGGAGGAAGATGTT...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTTCAAATGTGCAGACTTaGGATGCTCAGCTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFSNVQT*DAQLVG
Trigger: ACCTACCAGCTGAGCATCCCAAGTCTGCACATTTGA...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS-3UTR CCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCTTGGAAGAGGTTTGGTaGGGTGATTATACCATACTA +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCLEEVW*GDYTIL
Trigger: TAGTATGGTATAATCACCCCACCAAACCTCTTCCAA...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS-3UTR CCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCCCTTCCTTCTGGGTGTaGGGCAGGGCCCTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LRLWKATISKLGIIKYIIPSFWV*GRALSG
Trigger: TCCAGAGAGGGCCCTGCCCCACACCCAGAAGGAAGG...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557410.5
CDS-3UTR TCA 90 bp ACAATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGCGGCCAGAGACATGCTaGGGACTCGCTTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: TMNYRMPQAYLSMKIFTRRPETC*GLASFP
Trigger: TGGGAAGGAAGCGAGTCCTCAGCATGTCTCTGGCCG...CCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTGTCATGGACTTGCTTaGGAATCATCCAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPCHGLA*ESSRLH
Trigger: ATGAAGCCTGGATGATTCTCAAGCAAGTCCATGACA...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCGTACCAGGTTCCTGTTaGACTTTGGATCTCAATGAA +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTVPGSC*TLDLNE
Trigger: TTCATTGAGATCCAAAGTTCAACAGGAACCTGGTAC...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTCAGTCCATAGTAACTaGATGCCATGGCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTSVHSN*MPWQTK
Trigger: TTTGGTTTGCCATGGCATTCAGTTACTATGGACTGA...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCAGTCCATAGTAACTaGATGCCATGGCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILSVHSN*MPWQTK
Trigger: TTTGGTTTGCCATGGCATTCAGTTACTATGGACTGA...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp ACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTAGCCACCAATCATCTTaGGCCTTCCAATTCTATCCA +
Preference number: 4 (lower is better)
Translates to: TVIGRKCGCISVSWTRFSSHQSS*AFQFYP
Trigger: TGGATAGAATTGGAAGGCTCAAGATGATTGGTGGCT...AGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTAGTACCAGAGGCCACTaGACACATCTCACATTGTTT +
Preference number: 4 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFSTRGH*THLTLF
Trigger: AAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACT...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTAATTCATCCTCCCAACAGTCACTGCAAGTGGAATaGGGCAGGAAGCAGAAACTG +
Preference number: 4 (lower is better)
Translates to: AWIKQTAQCEFVNSSSQQSLQVE*GRKQKL
Trigger: CAGTTTCTGCTTCCTGCCTCATTCCACTTGCAGTGA...CTGTTGGGAGGATGAATTAACAAACTCACATTGTGCAGTCTGCTTAATCCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTAACCTGAATCAAAACTaGCTAGTGCACAGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKINLNQN*LVHSKY
Trigger: ATACTTGCTGTGCACTAGTCAGTTTTGATTCAGGTT...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTAGAGGTTTGGTGGGGTaGTTATACCATACTATATGC +
Preference number: 4 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFRGLVG*LYHTIC
Trigger: GCATATAGTATGGTATAATCACCCCACCAAACCTCT...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS-3UTR GCA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGATGGCCTGATTTGTCCTaGCACCGAAGGTTATGCTCT +
Preference number: 4 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRWPDLS*HRRLCS
Trigger: AGAGCATAACCTTCGGTGGCAGGACAAATCAGGCCA...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTAATTCATCCTCCCAACAGTGGCCTGATTTGTCCTaGCACCGAAGGTTATGCTCT +
Preference number: 4 (lower is better)
Translates to: AWIKQTAQCEFVNSSSQQWPDLS*HRRLCS
Trigger: AGAGCATAACCTTCGGTGGCAGGACAAATCAGGCCA...CTGTTGGGAGGATGAATTAACAAACTCACATTGTGCAGTCTGCTTAATCCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp ACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTAGGCTTCATCATGTTTaGCCATCTCTAGCAGAAACC +
Preference number: 4 (lower is better)
Translates to: TVIGRKCGCISVSWTRFSRLHHV*PSLAET
Trigger: GGTTTCTGCTAGAGATGGGCAAACATGATGAAGCCT...AGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR GCA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTTCCATAGTAACTGAATaGCATGGCAAACCAAACCAC +
Preference number: 4 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFSIVTE*HGKPNH
Trigger: GTGGTTTGGTTTGCCATGGCATTCAGTTACTATGGA...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTCCATAGTAACTGAATaGCATGGCAAACCAAACCAC +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTSIVTE*HGKPNH
Trigger: GTGGTTTGGTTTGCCATGGCATTCAGTTACTATGGA...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR GCA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTAGGAAGTCATTATCTTaGTCCAAGTCCATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPRKSLS*SKSMWQ
Trigger: CTGCCACATGGACTTGGAGCAAGATAATGACTTCCT...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR GCA 90 bp GCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTAATTCATCCTCCCAACAGGGCAGGAAGTGTGGATaGATTTCAGTGTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: AWIKQTAQCEFVNSSSQQGRKCG*ISVSWT
Trigger: TGTCCAGGACACTGAAATGCATCCACACTTCCTGCC...CTGTTGGGAGGATGAATTAACAAACTCACATTGTGCAGTCTGCTTAATCCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGGTTTTTCCTCTTCCATaGAGTCAAGACTTCAGTCTA +
Preference number: 4 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWVFPLP*SQDFSL
Trigger: TAGACTGAAGTCTTGACTGCATGGAAGAGGAAAAAC...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTCAAACAACTAGTTCTTaGAGGCTGATGTTCATCCGG +
Preference number: 4 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRAQTTSS*RLMFIR
Trigger: CCGGATGAACATCAGCCTGCAAGAACTAGTTGTTTG...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp CTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGTAGTGGGAAAATGTGGCACTTaGCCATTGAGAGCACTGCAA +
Preference number: 4 (lower is better)
Translates to: LQRVPEATEHISHCFWVVGKCGT*PLRALQ
Trigger: TTGCAGTGCTCTCAATGGGCAAGTGCCACATTTTCC...CACTACCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTTTTTTGGGTTACTGTTaGACTACCACTAGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKIFLGYC*TTTSCL
Trigger: GAGACAACTAGTGGTAGTGCAACAGTAACCCAAAAA...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATAAATACTTCAAGCCCTaGAACCAGACACAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNKYFKP*NQTQAH
Trigger: ATGGGCCTGTGTCTGGTTGCAGGGCTTGAAGTATTT...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATAGAGCTGGGCCTAAATaGGACACAGCTACATGCAAA +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNRAGPK*DTATCK
Trigger: TTTGCATGTAGCTGTGTCGCATTTAGGCCCAGCTCT...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGTCCTCACCATGCCTCTaGAAATCAAACAAAATGTAC +
Preference number: 4 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKSSPCL*KSNKMY
Trigger: GTACATTTTGTTTGATTTGCAGAGGCATGGTGAGGA...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp CTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGTAGTGTTTTGGAAATCTCGCTaGTGCCACAACAGCCATGCA +
Preference number: 4 (lower is better)
Translates to: LQRVPEATEHISHCFWVVFWKSR*CHNSHA
Trigger: TGCATGGCTGTTGTGGCAGCAGCGAGATTTCCAAAA...CACTACCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTGGTGTCTATGGGATTTaGTTTGCCGTTCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPGVYGI*FAVLLE
Trigger: CTCCAAAAGAACGGCAAAGCAAATCCCATAGACACC...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTTGTCTGTTGGAAGTCTaGAAAGTTTCAAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFCLLEV*KVSSSG
Trigger: ACCAGAGCTTGAAACTTTCCAGACTTCCAACAGACA...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTGCACTCGATGTCTGTTaGAAGTCTGGAAAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFALDVC*KSGKFQ
Trigger: TTGAAACTTTCCAGACTTCCAACAGACATCGAGTGC...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACCTGTGCATCTTCTTCTaGGTTGGACTCATTGCCGCG +
Preference number: 4 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHLCIFF*VGLIAA
Trigger: CGCGGCAATGAGTCCAACCCAGAAGAAGATGCACAG...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGATCGTCTTCCTCATCATaGCCTTCGGTGACATCACTC +
Preference number: 4 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRSSSSS*PSVTSL
Trigger: GAGTGATGTCACCGAAGGCCATGATGAGGAAGACGA...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTAAACCTTGGGCTCTCTaGCATGAACTTCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVKPWAL*HELQGH
Trigger: GTGGCCCTGAAGTTCATGCCAGAGAGCCCAAGGTTT...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTGGTGTTTCCCAGGATaGCGCCAAATTTGCATAATC +
Preference number: 4 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPWCFPG*RQICII
Trigger: GATTATGCAAATTTGGCGCCATCCTGGGAAACACCA...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATCAAAAGAAGCAAAGATaGTGTTTCCCAGGATGGCGC +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNQKKQR*CFPGWR
Trigger: GCGCCATCCTGGGAAACACCATCTTTGCTTCTTTTG...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CTTGCCTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGGGATGGGGACCACTTTaGTTATCCCAACAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: LACKEYQRPLNTSHIVFGGWGPL*LSQQKK
Trigger: CTTCTTTTGTTGGGATAACCAAAGTGGTCCCCATCC...CCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGAGGATGGGGACCACTTTaGTTATCCCAACAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRGWGPL*LSQQKK
Trigger: CTTCTTTTGTTGGGATAACCAAAGTGGTCCCCATCC...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCGATTTGTTAAGTTGTTaGGCTCCAAGGAGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTDLLSC*APRSFL
Trigger: CAGAAAGCTCCTTGGAGCCCAACAACTTAACAAATC...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GGAGAATCCTCTCCCTGCCTTGGACTGGGAAGACTTGAAGTTAAACACGCAGCTACAAAGAAAAGTGCCTaGATTAAGCAGACTGCACAA +
Preference number: 4 (lower is better)
Translates to: GESSPCLGLGRLEVKHAATKKSA*IKQTAQ
Trigger: TTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGT...AGCTGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCGCAGAAGTGAGATCTTaGAAACCAAATGGAGTTAGC +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTAEVRS*KPNGVS
Trigger: GCTAACTCCATTTGGTTTCCAAGATCTCACTTCTGC...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTGAAGTGAAAAAGAAGTaGATGGCCAGAATGCTGTAC +
Preference number: 4 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFEVKKK*MARMLY
Trigger: GTACAGCATTCTGGCCATCCACTTCTTTTTCACTTC...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTAATTCATCCTCCCAACAGCGTAGGAGGGAACGCTaGGTTGGGGTTTACTTGTTA +
Preference number: 4 (lower is better)
Translates to: AWIKQTAQCEFVNSSSQQRRRER*VGVYLL
Trigger: TAACAAGTAAACCCCAACCCAGCGTTCCCTCCTACG...CTGTTGGGAGGATGAATTAACAAACTCACATTGTGCAGTCTGCTTAATCCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTGGAATAGTCAATGAATaGTCTCAGGGAATGGCGAGT +
Preference number: 4 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRAGIVNE*SQGMAS
Trigger: ACTCGCCATTCCCTGAGACCATTCATTGACTATTCC...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAATGTGTCCCCAGGGCTTaGCAGAGAGACTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: LGVYGICFAVLLEECFNKCVPRA*QRDWPM
Trigger: CATGGGCCAGTCTCTCTGCCAAGCCCTGGGGACACA...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTTATTTTGGGTGTCTATaGGATTTGCTTTGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKIYFGCL*DLLCRS
Trigger: AGAACGGCAAAGCAAATCCCATAGACACCCAAAATA...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CTTGCCTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGCTTCCAGGATTCAGATaGACCAAAAAGCTGAGACCA +
Preference number: 4 (lower is better)
Translates to: LACKEYQRPLNTSHIVFGLPGFR*TKKLRP
Trigger: TGGTCTCAGCTTTTTGGTCCATCTGAATCCTGGAAG...CCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTGCGTTACAGAAAGATaGCAGGCTTCCAAAGAAACA +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILCVTER*QASKET
Trigger: TGTTTCTTTGGAAGCCTGCCATCTTTCTGTAACGCA...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTATGAGCAACTCTACATaGACATACGGTAAGCTCTAT +
Preference number: 4 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPMSNST*TYGKLY
Trigger: ATAGAGCTTACCGTATGTCCATGTAGAGTTGCTCAT...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCAGATGCCCAGCCAACTaGGGTGTTCTCCTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLARCPAN*GVLLAS
Trigger: AGAAGCGAGGAGAACACCTCAGTTGGCTGGGCATCT...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTGATACAGCTCCACTGTaGTCACATCCAGAGCATTCC +
Preference number: 4 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVDTAPL*SHPEHS
Trigger: GGAATGCTCTGGATGTGATCACAGTGGAGCTGTATC...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTGAGTTACAAACATATTaGCAGCTGAAGTGGGTCCTA +
Preference number: 4 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPELQTY*QLKWVL
Trigger: TAGGACCCACTTCAGCTGTCAATATGTTTGTAACTC...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAACCCAAATCAGTCACCTaGGTTACAAACATATTGACA +
Preference number: 4 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKPKSVT*VTNILT
Trigger: TGTCAATATGTTTGTAACTCAGGTGACTGATTTGGG...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATAGTACCAGAGGCCACTaGACACATCTCACATTGTTT +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNSTRGH*THLTLF
Trigger: AAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACT...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTTACAAAGACCTGAGTaGTGGATGAGATGGGAATTG +
Preference number: 4 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRALQRPE*WMRWEL
Trigger: CAATTCCCATCTCATCCATCACTCAGGTCTTTGTAA...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp ACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTTTACAAAGACCTGAGTaGTGGATGAGATGGGAATTG +
Preference number: 4 (lower is better)
Translates to: TVIGRKCGCISVSWTRFSLQRPE*WMRWEL
Trigger: CAATTCCCATCTCATCCATCACTCAGGTCTTTGTAA...AGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTAATTCATCCTCCCAACAGCCCTTTACAAAGACCTaGGTGATGGATGAGATGGGA +
Preference number: 4 (lower is better)
Translates to: AWIKQTAQCEFVNSSSQQPFTKT*VMDEMG
Trigger: TCCCATCTCATCCATCACTCAGGTCTTTGTAAAGGG...CTGTTGGGAGGATGAATTAACAAACTCACATTGTGCAGTCTGCTTAATCCAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTATCAGCATCAGGAGATaGCACAATACAGTTGAGACT +
Preference number: 4 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFISIRR*HNTVET
Trigger: AGTCTCAACTGTATTGTGTCATCTCCTGATGCTGAT...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp ACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTATCAGCATCAGGAGATaGCACAATACAGTTGAGACT +
Preference number: 4 (lower is better)
Translates to: TVIGRKCGCISVSWTRFSISIRR*HNTVET
Trigger: AGTCTCAACTGTATTGTGTCATCTCCTGATGCTGAT...AGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATGCTCTAGGAAAATGGTaGTCATTTTTCACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNALGKW*SFFTGC
Trigger: GCAGCCTGTGAAAAATGATCACCATTTTCCTAGAGC...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp ACTTCCCTGACAAGTCAAAGTACCACCTATTGGAAGAGTGTCAGTGCTACTCAAGGGTTCAACCTCTGCTaGGCTTCCGAAATACTTCAA +
Preference number: 4 (lower is better)
Translates to: TSLTSQSTTYWKSVSATQGFNLC*ASEILQ
Trigger: TTGAAGTATTTCGGAAGCTCAGCAGAGGTTGAACCC...TTGAGTAGCACTGACACTCTTCCAATAGGTGGTACTTTGACTTGTCAGGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTAATGTTTGGCCCATTTaGAATGTGGCAAAACTGCCA +
Preference number: 4 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFNVWPI*NVAKLP
Trigger: TGGCAGTTTTGCCACATTTCAAATGGGCCAAACATT...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGAAGTTTTGGCTACTTTaGAGTAGAAGAGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKKFWLL*SRRGRR
Trigger: TCTTCTTCCTCTTCTACTTCAAAGTAGCCAAAACTT...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGACTTGGCAGACTGCGTaGTGGCCTGATTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWTWQTA*WPDLSC
Trigger: GCAGGACAAATCAGGCCAGCACGCAGTCTGCCAAGT...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp ACTTCCCTGACAAGTCAAAGTACCACCTATTGGAAGAGTGTCAGTGCTACTCAAGGTGACATCACTCTGTaGATCTTCTTCTGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: TSLTSQSTTYWKSVSATQGDITL*IFFWVG
Trigger: TCCAACCCAGAAGAAGATGCACAGAGTGATGTCACC...TTGAGTAGCACTGACACTCTTCCAATAGGTGGTACTTTGACTTGTCAGGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGAGGTGACATCACTCTGTaGATCTTCTTCTGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRGDITL*IFFWVG
Trigger: TCCAACCCAGAAGAAGATGCACAGAGTGATGTCACC...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCATGAATTCATCCATTTaGTTGGGAGTTTTGATGTTG +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCMNSSI*LGVLML
Trigger: CAACATCAAAACTCCCAAGCAAATGGATGAATTCAT...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGCCACAGAACAGGCACTaGCAGCCGATCATTGCAGAC +
Preference number: 4 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWPQNRH*QPIIAD
Trigger: GTCTGCAATGATCGGCTGGCAGTGCCTGTTCTGTGG...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGATGTTTGATTCTTGCCTaGAAAGAGTACCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRCLILA*KEYQRP
Trigger: TGGCCTCTGGTACTCTTTGCAGGCAAGAATCAAACA...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCATGTTGTTTGATTCTTaGCTGCAAAGAGTACCAGAG +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTMLFDS*LQRVPE
Trigger: CTCTGGTACTCTTTGCAGGCAAGAATCAAACAACAT...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAAGTTTTTCCTCTTCCATaGAGTCAAGACTTCAGTCTA +
Preference number: 4 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKVFPLP*SQDFSL
Trigger: TAGACTGAAGTCTTGACTGCATGGAAGAGGAAAAAC...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp CTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGTAGTGTTAATATCCGCTCACTaGAAGTGGAATGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LQRVPEATEHISHCFWVVLISAH*KWNEAG
Trigger: TCCTGCCTCATTCCACTTGCAGTGAGCGGATATTAA...CACTACCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGACTTCCTTCTGCTTCCTaGCTGAATTGTGGATGTGAG +
Preference number: 4 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRLPSAS*LNCGCE
Trigger: CTCACATCCACAATTCAGGCAGGAAGCAGAAGGAAG...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp ACTTCCCTGACAAGTCAAAGTACCACCTATTGGAAGAGTGTCAGTGCTACTCAACTTCCTTCTGCTTCCTaGCTGAATTGTGGATGTGAG +
Preference number: 4 (lower is better)
Translates to: TSLTSQSTTYWKSVSATQLPSAS*LNCGCE
Trigger: CTCACATCCACAATTCAGGCAGGAAGCAGAAGGAAG...TTGAGTAGCACTGACACTCTTCCAATAGGTGGTACTTTGACTTGTCAGGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCATAAATTCCTCACCATaGCTCTGCAAATCAAACAAA +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCINSSP*LCKSNK
Trigger: TTTGTTTGATTTGCAGAGGCATGGTGAGGAATTTAT...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTAATTCATCCTCCCAACAGTGGAAATCTCGCTGCTaGCACAACAGCCATGCATAT +
Preference number: 4 (lower is better)
Translates to: AWIKQTAQCEFVNSSSQQWKSRC*HNSHAY
Trigger: ATATGCATGGCTGTTGTGGCAGCAGCGAGATTTCCA...CTGTTGGGAGGATGAATTAACAAACTCACATTGTGCAGTCTGCTTAATCCAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ACAATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGCAGACTGCGTGCTaGCCTGATTTGTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TMNYRMPQAYLSMKIFTRWQTAC*PDLSCH
Trigger: GTGGCAGGACAAATCAGGCCAGCACGCAGTCTGCCA...CCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTGCACTCGATGTCTGTTaGAAGTCTGGAAAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFALDVC*KSGKFQ
Trigger: TTGAAACTTTCCAGACTTCCAACAGACATCGAGTGC...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCTGTGGTAGAGGTTTaGGCTATTTCAATAACCATC +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILSVVEV*AISITI
Trigger: GATGGTTATTGAAATAGCCCAAACCTCTACCACAGA...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACTCGTCTTCCTCATCATaGCCTTCGGTGACATCACTC +
Preference number: 4 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHSSSSS*PSVTSL
Trigger: GAGTGATGTCACCGAAGGCCATGATGAGGAAGACGA...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGGTTCCTGTTGAACTTTaGATCTCAATGAATTCATCC +
Preference number: 4 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWVPVEL*ISMNSS
Trigger: GGATGAATTCATTGAGATCCAAAGTTCAACAGGAAC...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGGTTCCTGTTGAACTTTaGATCTCAATGAATTCATCC +
Preference number: 4 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKVPVEL*ISMNSS
Trigger: GGATGAATTCATTGAGATCCAAAGTTCAACAGGAAC...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGCTGACCAGCCAGCGCTaGTACCAGGTTCCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWLTSQR*YQVPVE
Trigger: TTCAACAGGAACCTGGTACCAGCGCTGGCTGGTCAG...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATTGGTGTTTCCCAGGATaGCGCCAAATTTGCATAATC +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNWCFPG*RQICII
Trigger: GATTATGCAAATTTGGCGCCATCCTGGGAAACACCA...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACCTCCAAGGAGCTTTCTaGAGGAACCTGGGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHLQGAF*RNLGVS
Trigger: AGAAACACCCAGGTTCCTCCAGAAAGCTCCTTGGAG...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCAGTTCTCCCAAAATATaGCTAAAATGCTGGCAATAT +
Preference number: 4 (lower is better)
Translates to: EMLAPRIVCALTGESSPCSSPKI*LKCWQY
Trigger: ATATTGCCAGCATTTTAGCCATATTTTGGGAGAACT...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTGCAGAAGTGAGATCTTaGAAACCAAATGGAGTTAGC +
Preference number: 4 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFAEVRS*KPNGVS
Trigger: GCTAACTCCATTTGGTTTCCAAGATCTCACTTCTGC...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCAGCCAGATGTGGAAGTaGAGACACCTTTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLASQMWK*RHLSQG
Trigger: GCCCTGGGAAAGGTGTCTCCACTTCCACATCTGGCT...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTCATTTTTGCATTTTTaGTGGCGAATTGGAAAGCTA +
Preference number: 4 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYSFLHF*WRIGKL
Trigger: TAGCTTTCCAATTCGCCACCAAAAATGCAAAAATGA...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGAAACATCTTCCTCCACTaGCTACATGTCAGCACATTT +
Preference number: 4 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRNIFLH*LHVSTF
Trigger: AAATGTGCTGACATGTAGCCAGTGGAGGAAGATGTT...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp AAGCCCAATCTTCATATAATGACTCTAACTTCCAGCCAAGTTGATTTGTTAAGTAGGTTATGCTCTGGGTaGCAAATCCGCTGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: KPNLHIMTLTSSQVDLLSRLCSG*QIRWRP
Trigger: CGGCCGCCAGCGGATTTGCCACCCAGAGCATAACCT...ACTTAACAAATCAACTTGGCTGGAAGTTAGAGTCATTATATGAAGATTGGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS-3UTR CCA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAACAGTCTGTAGCTATTTaGCCTTTGACAAGTGACTTT +
Preference number: 4 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKQSVAI*PLTSDF
Trigger: AAAGTCACTTGTCAAAGGCCAAATAGCTACAGACTG...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394232.6
3UTR CAA 72 bp ACACAACGTAGGAGGGAACGCTGGGTTGGGGTTTACTaGTTACATGACCTCAGGATGATGTACTACAAACTT +
Preference number: 4 (lower is better)
Translates to: TQRRRERWVGVY*LHDLRMMYYKL
Trigger: AAGTTTGTAGTACATCATCCTGAGGTCATGTAACAAGTAAACCCCAACCCAGCGTTCCCTCCTACGTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp AAGCCCAATCTTCATATAATGACTCTAACTTCCAGCCAAGTTGATTTGTTAAGTTGCCTGGTTGCCCCTTaGGCTATATCCCTCGCTCTG +
Preference number: 4 (lower is better)
Translates to: KPNLHIMTLTSSQVDLLSCLVAP*AISLAL
Trigger: CAGAGCGAGGGATATAGCTCAAGGGGCAACCAGGCA...ACTTAACAAATCAACTTGGCTGGAAGTTAGAGTCATTATATGAAGATTGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCTTGACATCATCTGGGTaGGGGATACCCTGGTACTCG +
Preference number: 4 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLALTSSG*GIPWYS
Trigger: CGAGTACCAGGGTATCCCTCACCCAGATGATGTCAA...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp ACAATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGGGCTGCCCAGGAAGCTaGCGAGGTAAATCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: TMNYRMPQAYLSMKIFTRGCPGS*RGKSGS
Trigger: ACTTCCTGATTTACCTCGTCAGCTTCCTGGGCAGCC...CCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTTAAGTCCTTGCACTTaGCTTAGAGAAATGCTTGCT +
Preference number: 4 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRALSPCT*LREMLA
Trigger: AGCAAGCATTTCTCTAAGTCAAGTGCAAGGACTTAA...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp ACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTTTAAGTCCTTGCACTTaGCTTAGAGAAATGCTTGCT +
Preference number: 4 (lower is better)
Translates to: TVIGRKCGCISVSWTRFSLSPCT*LREMLA
Trigger: AGCAAGCATTTCTCTAAGTCAAGTGCAAGGACTTAA...AGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAAACTTCCAGCCAAGTTaGTTTGTTAAGTTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRNFQPS*FVKLLG
Trigger: GCCCAACAACTTAACAAATCAACTTGGCTGGAAGTT...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGAATTGTCAGACAGTTCTaGTGTTTTTCCTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRIVRQF*CFSSSM
Trigger: CATGGAAGAGGAAAAACATCAGAACTGTCTGACAAT...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCATGACACAATACAGTTaGGACTATGGAAAGCAACTA +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILMTQYS*DYGKQL
Trigger: TAGTTGCTTTCCATAGTCTCAACTGTATTGTGTCAT...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCATGACACAATACAGTTaGGACTATGGAAAGCAACTA +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTMTQYS*DYGKQL
Trigger: TAGTTGCTTTCCATAGTCTCAACTGTATTGTGTCAT...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCACTCAAAATATGGCTTaGGAATTGATGCCATCTATG +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILTQNMA*ELMPSM
Trigger: CATAGATGGCATCAATTCTCAAGCCATATTTTGAGT...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTACTCTACCAATGTTCTaGTTGCAAATCTTTAGCTCA +
Preference number: 4 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFTLPMF*LQIFSS
Trigger: TGAGCTAAAGATTTGCAATCAGAACATTGGTAGAGT...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp ACAATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTCGAGACCACTGGCCTaGCTTTCAGGGAAGAACAGG +
Preference number: 4 (lower is better)
Translates to: TMNYRMPQAYLSMKIFTRSRPLA*LSGKNR
Trigger: CCTGTTCTTCCCTGAAAGTCAGGCCAGTGGTCTCGA...CCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCGCACCCTCCTTTTCATaGCTCACAGCTTGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: LRLWKATISKLGIIKYIIAPSFS*LTACGR
Trigger: ACGGCCACAAGCTGTGAGTCATGAAAAGGAGGGTGC...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp ACAATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTCCATTCCTTGGTTCTaGGACTGCCTGGTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: TMNYRMPQAYLSMKIFTRSIPWF*DCLVAP
Trigger: AGGGGCAACCAGGCAGTCGCAGAACCAAGGAATGGA...CCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAATACTGGTGGGCCAACTaGTCCTCATCTTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LGVYGICFAVLLEECFNKYWWAN*SSSSSL
Trigger: GAGGCTGGAAGATGAGGAGCAGTTGGCCCACCAGTA...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGAAGGCTCCATATCCCTaGACGAAGGAAGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWKAPYP*TKEERE
Trigger: CTCCCTCTCTTCCTTCGTGCAGGGATATGGAGCCTT...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp GCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTAATTCATCCTCCCAACAGAGGCTTCATCATGTTTaGCCATCTCTAGCAGAAACC +
Preference number: 4 (lower is better)
Translates to: AWIKQTAQCEFVNSSSQQRLHHV*PSLAET
Trigger: GGTTTCTGCTAGAGATGGGCAAACATGATGAAGCCT...CTGTTGGGAGGATGAATTAACAAACTCACATTGTGCAGTCTGCTTAATCCAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp CTTGCCTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGGCATTATCCCAGACCTaGTTGAAAATGGTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: LACKEYQRPLNTSHIVFGALSQT*LKMVLN
Trigger: ATTCAAGACCATTTTCAAGCAGGTCTGGGATAATGC...CCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGAGCATTATCCCAGACCTaGTTGAAAATGGTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRALSQT*LKMVLN
Trigger: ATTCAAGACCATTTTCAAGCAGGTCTGGGATAATGC...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR GCA 90 bp ACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTGCATTATCCCAGACCTaGTTGAAAATGGTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: TVIGRKCGCISVSWTRFSALSQT*LKMVLN
Trigger: ATTCAAGACCATTTTCAAGCAGGTCTGGGATAATGC...AGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR GCA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTGCATTATCCCAGACCTaGTTGAAAATGGTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRAALSQT*LKMVLN
Trigger: ATTCAAGACCATTTTCAAGCAGGTCTGGGATAATGC...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp GCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTAATTCATCCTCCCAACAGAGGAAGTCATTATCTTaGTCCAAGTCCATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: AWIKQTAQCEFVNSSSQQRKSLS*SKSMWQ
Trigger: CTGCCACATGGACTTGGAGCAAGATAATGACTTCCT...CTGTTGGGAGGATGAATTAACAAACTCACATTGTGCAGTCTGCTTAATCCAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCAATGCTGGCAATATTTaGAGATACCAGTTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILNAGNI*RYQLWK
Trigger: TTTCCACAACTGGTATCTGCAAATATTGCCAGCATT...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTGGAAGAGTGTCAGTaGTACTCAAAATATGGCTTG +
Preference number: 4 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPLEECQ*YSKYGL
Trigger: CAAGCCATATTTTGAGTAGCACTGACACTCTTCCAA...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp ACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCTATGTAGAGAAATTTaGTCCACTCTGTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: TVIGRKCGCISVSWTRFSLCREI*STLSSL
Trigger: CAAGGAAGACAGAGTGGAGCAAATTTCTCTACATAG...AGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATCACTTTTGTAGCAGTTaGTGTGGGAATGATTCGAGA +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNHFCSS*CGNDSR
Trigger: TCTCGAATCATTCCCACAGCAACTGCTACAAAAGTG...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCAGAAGTGTTGCGTTaGGAAGTGTTGATTAGAAAT +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILSEVLR*EVLIRN
Trigger: ATTTCTAATCAACACTTCCCAACGCAACACTTCTGA...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATTGTCTGTTGGAAGTCTaGAAAGTTTCAAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNCLLEV*KVSSSG
Trigger: ACCAGAGCTTGAAACTTTCCAGACTTCCAACAGACA...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTGGTAATAGCCATCACTaGGAGCATAGCCCCCATAAT +
Preference number: 4 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVGNSHH*EHSPHN
Trigger: ATTATGGGGGCTATGCTCCCAGTGATGGCTATTACC...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGGGCCTTGACATCATCTaGGTGAGGGATACCCTGGTA +
Preference number: 4 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWGLDII*VRDTLV
Trigger: TACCAGGGTATCCCTCACCCAGATGATGTCAAGGCC...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGATGGTCTCGTACTGGTaGGCCAACTGCTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWMVSYW*ANCSSS
Trigger: AGATGAGGAGCAGTTGGCCCACCAGTACGAGACCAT...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCCACTGGAAGCGGCCATaGCCACACTCATCCATGATG +
Preference number: 4 (lower is better)
Translates to: LRLWKATISKLGIIKYIIHWKRP*PHSSMM
Trigger: CATCATGGATGAGTGTGGCCATGGCCGCTTCCAGTG...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCAAAAAGAGGATCCACTaGAAGCGGCCATGGCCACAC +
Preference number: 4 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLAKKRIH*KRPWPH
Trigger: GTGTGGCCATGGCCGCTTCCAGTGGATCCTCTTTTT...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGTGTCCTTCTCTGCACTaGGCAGGGCAAAACTCACCA +
Preference number: 4 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWCPSLH*AGQNSP
Trigger: TGGTGAGTTTTGCCCTGCCCAGTGCAGAGAAGGACA...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCGTTCCTGTTGAACTTTaGATCTCAATGAATTCATCC +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTVPVEL*ISMNSS
Trigger: GGATGAATTCATTGAGATCCAAAGTTCAACAGGAAC...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CCA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCCTGTTCTCGAGTCTCTaGCAGTCGAAGGGCAATCAG +
Preference number: 4 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLALFSSL*QSKGNQ
Trigger: CTGATTGCCCTTCGACTGCCAGAGACTCGAGAACAG...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATGATTTGTTAAGTTGTTaGGCTCCAAGGAGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNDLLSC*APRSFL
Trigger: CAGAAAGCTCCTTGGAGCCCAACAACTTAACAAATC...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CTTGCCTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGACAAAGAAAAGTGCCTaGATTAAGCAGACTGCACAA +
Preference number: 4 (lower is better)
Translates to: LACKEYQRPLNTSHIVFGTKKSA*IKQTAQ
Trigger: TTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGT...CCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAACTGTTTCAAAAGCTCTaGACACATAGCATAGATTTC +
Preference number: 4 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKLFQKL*THSIDF
Trigger: GAAATCTATGCTATGTGTCCAGAGCTTTTGAAACAG...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ACAATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGCAAGTTCACCTCCGCTaGCAGTTGTGCGTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: TMNYRMPQAYLSMKIFTRQVHLR*QLCVAH
Trigger: GTGAGCTACGCACAACTGCCAGCGGAGGTGAACTTG...CCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCGATGTTCATCCGGCCTaGGCAGGTGCAAGTTCACCT +
Preference number: 4 (lower is better)
Translates to: LRLWKATISKLGIIKYIIDVHPA*AGASSP
Trigger: AGGTGAACTTGCACCTGCCCAGGCCGGATGAACATC...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGCTGCCAGGGAAAATGTaGCACTTGCCCATTGAGAGC +
Preference number: 4 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWLPGKM*HLPIES
Trigger: GCTCTCAATGGGCAAGTGCCACATTTTCCCTGGCAG...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAAATCTCAAATCGACGGTaGAAAGGTGTCATAAGATTT +
Preference number: 4 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKISNRR*KGVIRF
Trigger: AAATCTTATGACACCTTTCCACCGTCGATTTGAGAT...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGAAGTGAAAAAGAAGTaGATGGCCAGAATGCTGTAC +
Preference number: 4 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCREVKKK*MARMLY
Trigger: GTACAGCATTCTGGCCATCCACTTCTTTTTCACTTC...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCATACAGTTGAGACTATaGAAAGCAACTATTTCCAAG +
Preference number: 4 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFIQLRL*KATISK
Trigger: CTTGGAAATAGTTGCTTTCCATAGTCTCAACTGTAT...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGATACAGTTGAGACTATaGAAAGCAACTATTTCCAAG +
Preference number: 4 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKIQLRL*KATISK
Trigger: CTTGGAAATAGTTGCTTTCCATAGTCTCAACTGTAT...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTATGGTAGGTAAGAAGTaGAGGACAGGGCCACCATTT +
Preference number: 4 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVMVGKK*RTGPPF
Trigger: AAATGGTGGCCCTGTCCTCCACTTCTTACCTACCAT...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CTTGCCTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGTATTTTGGGTGTCTATaGGATTTGCTTTGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: LACKEYQRPLNTSHIVFGYFGCL*DLLCRS
Trigger: AGAACGGCAAAGCAAATCCCATAGACACCCAAAATA...CCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATTGCGTTACAGAAAGATaGCAGGCTTCCAAAGAAACA +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNCVTER*QASKET
Trigger: TGTTTCTTTGGAAGCCTGCCATCTTTCTGTAACGCA...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTCCAGTCATTGTAAACTaGCTAATGGGTCCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVPVIVN*LMGPFA
Trigger: GGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGGACCCTGGCTTCTTTTaGAAGAGGTTTGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWDPGFF*KRFGGV
Trigger: CACCCCACCAAACCTCTTCCAAAAGAAGCCAGGGTC...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394232.6
3UTR CAA 72 bp GATCTTGGAAACCAAATGGAGTTAGCCCCCAAATTATaGCAGCCACCCCAGCACTCCAATGTTAATCCAATT +
Preference number: 4 (lower is better)
Translates to: DLGNQMELAPKL*QPPQHSNVNPI
Trigger: AATTGGATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTGGTTTCCAAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGGCAGAGCACAGACGATaGCAAACACTCTCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWAEHRR*QTLSSY
Trigger: ATAGCTGGAGAGTGTTTGTCATCGTCTGTGCTCTGC...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTAACTTTGGATCTCAATaGATTCATCCATTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFNFGSQ*IHPFAW
Trigger: CCAAGCAAATGGATGAATTCATTGAGATCCAAAGTT...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGTAGTGCCCAAATCAGTCACCTaGGTTACAAACATATTGACA +
Preference number: 4 (lower is better)
Translates to: LQRVPEATEHISHCFWVVPKSVT*VTNILT
Trigger: TGTCAATATGTTTGTAACTCAGGTGACTGATTTGGG...CACTACCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATGCATTTCTCCAATACTaGGAAAACACTCGATATAGC +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNAFLQY*ENTRYS
Trigger: GCTATATCGAGTGTTTTCTCAGTATTGGAGAAATGC...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCTACATTGTCCCCCAGTaGCCTGCCACAGAGACTATT +
Preference number: 4 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLAYIVPQ*PATETI
Trigger: AATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTA...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp CTTGCCTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGATGACACAATACAGTTaGGACTATGGAAAGCAACTA +
Preference number: 4 (lower is better)
Translates to: LACKEYQRPLNTSHIVFGMTQYS*DYGKQL
Trigger: TAGTTGCTTTCCATAGTCTCAACTGTATTGTGTCAT...CCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp ACTTCCCTGACAAGTCAAAGTACCACCTATTGGAAGAGTGTCAGTGCTACTCAACATCATAAGGCACAATaGATTACAGGATGCCACAAG +
Preference number: 4 (lower is better)
Translates to: TSLTSQSTTYWKSVSATQHHKAQ*ITGCHK
Trigger: CTTGTGGCATCCTGTAATTCATTGTGCCTTATGATG...TTGAGTAGCACTGACACTCTTCCAATAGGTGGTACTTTGACTTGTCAGGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp ACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTACTCTACCAATGTTCTaGTTGCAAATCTTTAGCTCA +
Preference number: 4 (lower is better)
Translates to: TVIGRKCGCISVSWTRFSTLPMF*LQIFSS
Trigger: TGAGCTAAAGATTTGCAATCAGAACATTGGTAGAGT...AGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATAACCTGAATCAAAACTaGCTAGTGCACAGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNNLNQN*LVHSKY
Trigger: ATACTTGCTGTGCACTAGTCAGTTTTGATTCAGGTT...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACGATGGACCAAAAAGCTaGGACCAAATCTCACACACA +
Preference number: 4 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHDGPKS*DQISHT
Trigger: TGTGTGTGAGATTTGGTCTCAGCTTTTTGGTCCATC...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTAAGTTTTGGCTACTTTaGAGTAGAAGAGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRAKFWLL*SRRGRR
Trigger: TCTTCTTCCTCTTCTACTTCAAAGTAGCCAAAACTT...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp CTTGCCTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGGCCCAAAGATTAATTTaGACTTTCCAAGTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LACKEYQRPLNTSHIVFGAQRLI*TFQVLA
Trigger: AGCCAAAACTTGGAAAGTTCAAATTAATCTTTGGGC...CCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACTCCCACTGGAGAGAATaGAACCTGTTAATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHSHWRE*NLLILQ
Trigger: CTGAAGGATTAACAGGTTTCATTCTCTCCAGTGGGA...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGTGGCCTGATTTGTCCTaGCACCGAAGGTTATGCTCT +
Preference number: 4 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWWPDLS*HRRLCS
Trigger: AGAGCATAACCTTCGGTGGCAGGACAAATCAGGCCA...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGATGAATTCATCCATTTaGTTGGGAGTTTTGATGTTG +
Preference number: 4 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSMNSSI*LGVLML
Trigger: CAACATCAAAACTCCCAAGCAAATGGATGAATTCAT...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR GCA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAATCAGAGTATCCTCAATaGTACTATGTCAATTTTCGA +
Preference number: 4 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKSEYPQ*YYVNFR
Trigger: TCGAAAATTGACATAGTAGCATTGAGGATACTCTGA...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCGATCTCTATAGATGTTaGTCAAATACTTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTDLYRC*SNTWLS
Trigger: AGAAAGCCAAGTATTTGAGCAACATCTATAGAGATC...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTTGTTTGATTCTTGCCTaGAAAGAGTACCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVCLILA*KEYQRP
Trigger: TGGCCTCTGGTACTCTTTGCAGGCAAGAATCAAACA...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCAATCCTGCAAAAGTCTaGAGAGCTTGGCTGCACCCT +
Preference number: 4 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLANPAKV*RAWLHP
Trigger: AGGGTGCAGCCAAGCTCTGCAGACTTTTGCAGGATT...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATCTATGTAGAGAAATTTaGTCCACTCTGTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNLCREI*STLSSL
Trigger: CAAGGAAGACAGAGTGGAGCAAATTTCTCTACATAG...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGCTTACTTGTCATTTTTaGATTTTTGGTGGCGAATTG +
Preference number: 4 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSLTCHF*IFGGEL
Trigger: CAATTCGCCACCAAAAATGCAAAAATGACAAGTAAG...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAACTTACTTGTCATTTTTaGATTTTTGGTGGCGAATTG +
Preference number: 4 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKLTCHF*IFGGEL
Trigger: CAATTCGCCACCAAAAATGCAAAAATGACAAGTAAG...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp ACAATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGCTGGGAGGTGGAGATTaGAGCAAGCCAAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: TMNYRMPQAYLSMKIFTRLGGGD*SKPRLH
Trigger: GTGCAATCTTGGCTTGCTGCAATCTCCACCTCCCAG...CCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCGAAATGTGGCAAAACTaGCAAATCTCTAACTACTTA +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILEMWQN*QISNYL
Trigger: TAAGTAGTTAGAGATTTGGCAGTTTTGCCACATTTC...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp ACTTCCCTGACAAGTCAAAGTACCACCTATTGGAAGAGTGTCAGTGCTACTCAATTAAGAGCCCTTCCCTaGACCTTAATCTCTTTCATC +
Preference number: 4 (lower is better)
Translates to: TSLTSQSTTYWKSVSATQLRALP*TLISFI
Trigger: GATGAAAGAGATTAAGGTGCAGGGAAGGGCTCTTAA...TTGAGTAGCACTGACACTCTTCCAATAGGTGGTACTTTGACTTGTCAGGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTTAATCCTTCAGAATTaGTCTTTGGAGCCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRALILQN*SLEPKD
Trigger: ATCTTTGGGCTCCAAAGAGCAATTCTGAAGGATTAA...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCGGTTCTGCGACTGCCTaGTTGCCCCTTGAGCTATAT +
Preference number: 4 (lower is better)
Translates to: LRLWKATISKLGIIKYIIGSATA*LPLELY
Trigger: ATATAGCTCAAGGGGCAACCAGGCAGTCGCAGAACC...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp AAGCCCAATCTTCATATAATGACTCTAACTTCCAGCCAAGTTGATTTGTTAAGTCACTGGAAGCGGCCATaGCCACACTCATCCATGATG +
Preference number: 4 (lower is better)
Translates to: KPNLHIMTLTSSQVDLLSHWKRP*PHSSMM
Trigger: CATCATGGATGAGTGTGGCCATGGCCGCTTCCAGTG...ACTTAACAAATCAACTTGGCTGGAAGTTAGAGTCATTATATGAAGATTGGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAAAAAAAGAGGATCCACTaGAAGCGGCCATGGCCACAC +
Preference number: 4 (lower is better)
Translates to: LGVYGICFAVLLEECFNKKKRIH*KRPWPH
Trigger: GTGTGGCCATGGCCGCTTCCAGTGGATCCTCTTTTT...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
43% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCAAACCTTGGGCTCTCTaGCATGAACTTCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LRLWKATISKLGIIKYIIKPWAL*HELQGH
Trigger: GTGGCCCTGAAGTTCATGCCAGAGAGCCCAAGGTTT...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCCTGTTGCTCTCTGGTTaGTGGGATACAGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: LRLWKATISKLGIIKYIILLLSG*WDTAPL
Trigger: CAGTGGAGCTGTATCCCACCAACCAGAGAGCAACAG...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCCTCCAAGGAGCTTTCTaGAGGAACCTGGGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLALQGAF*RNLGVS
Trigger: AGAAACACCCAGGTTCCTCCAGAAAGCTCCTTGGAG...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTGTTGCTCAAATACTTaGCTTTCTAGATCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTCCSNT*LSRSEY
Trigger: ATACTCTGATCTAGAAAGCCAAGTATTTGAGCAACA...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCATACAGTTGAGACTATaGAAAGCAACTATTTCCAAG +
Preference number: 4 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILIQLRL*KATISK
Trigger: CTTGGAAATAGTTGCTTTCCATAGTCTCAACTGTAT...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp ACTTCCCTGACAAGTCAAAGTACCACCTATTGGAAGAGTGTCAGTGCTACTCAACAAAGTACCACCTATTaGAAGAGTGTCAGTGCTACT +
Preference number: 4 (lower is better)
Translates to: TSLTSQSTTYWKSVSATQQSTTY*KSVSAT
Trigger: AGTAGCACTGACACTCTTCCAATAGGTGGTACTTTG...TTGAGTAGCACTGACACTCTTCCAATAGGTGGTACTTTGACTTGTCAGGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTCACTTTTAGTATTTTaGGTGTCTATGGGATTTGCT +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTSLLVF*VSMGFA
Trigger: AGCAAATCCCATAGACACCCAAAATACTAAAAGTGA...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTGCACACACTATGGATaGTTTGTTTTCTACTTTTAC +
Preference number: 4 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTCTHYG*FVFYFY
Trigger: GTAAAAGTAGAAAACAAACCATCCATAGTGTGTGCA...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAATGAGCAACTCTACATaGACATACGGTAAGCTCTAT +
Preference number: 4 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRMSNST*TYGKLY
Trigger: ATAGAGCTTACCGTATGTCCATGTAGAGTTGCTCAT...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CAA 72 bp AATTTTTGGAGATCTCTGCCAGGGAAAATGTGGCACTaGCCCATTGAGAGCACTGCAAATCAACTCAAACAA +
Preference number: 4 (lower is better)
Translates to: NFWRSLPGKMWH*PIESTANQLKQ
Trigger: TTGTTTGAGTTGATTTGCAGTGCTCTCAATGGGCAAGTGCCACATTTTCCCTGGCAGAGATCTCCAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTTGCTTGCATTTCATTTaGTCAGACCTCATTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVCLHFI*SDLISW
Trigger: CCAGGAAATGAGGTCTGATCAAATGAAATGCAAGCA...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCCCCTTTACAAAGACCTaGGTGATGGATGAGATGGGA +
Preference number: 4 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLAPFTKT*VMDEMG
Trigger: TCCCATCTCATCCATCACTCAGGTCTTTGTAAAGGG...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACCAATCCTTTTACACATaGAAGGTGCAGTTTGCGGAT +
Preference number: 4 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHQSFYT*KVQFAD
Trigger: ATCCGCAAACTGCACCTTTCATGTGTAAAAGGATTG...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATGCCCAAAGATTAATTTaGACTTTCCAAGTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNAQRLI*TFQVLA
Trigger: AGCCAAAACTTGGAAAGTTCAAATTAATCTTTGGGC...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp CTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGTAGTGTTAATTATCTCAGGTTaGAGGTGCGTTACAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LQRVPEATEHISHCFWVVLIISG*RCVTER
Trigger: TCTTTCTGTAACGCACCTTCAACCTGAGATAATTAA...CACTACCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGAAATTCCACTATCCAGTaGCAGTCAGATGGAAAAACA +
Preference number: 4 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRNSTIQ*QSDGKT
Trigger: TGTTTTTCCATCTGACTGTCACTGGATAGTGGAATT...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS-3UTR GCA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTGATCTCTATAGATGTTaGTCAAATACTTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRADLYRC*SNTWLS
Trigger: AGAAAGCCAAGTATTTGAGCAACATCTATAGAGATC...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp ACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTGTAAGAAATTGTGCTTaGATTTCATTTGATCAGACC +
Preference number: 4 (lower is better)
Translates to: TVIGRKCGCISVSWTRFSVRNCA*ISFDQT
Trigger: GGTCTGATCAAATGAAATGCAAGCACAATTTCTTAC...AGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTGTAAGAAATTGTGCTTaGATTTCATTTGATCAGACC +
Preference number: 4 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFVRNCA*ISFDQT
Trigger: GGTCTGATCAAATGAAATGCAAGCACAATTTCTTAC...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAATCTGCAGAGCTTGGCTaGACCCTTTACAAAGACCTG +
Preference number: 4 (lower is better)
Translates to: LGVYGICFAVLLEECFNKSAELG*TLYKDL
Trigger: CAGGTCTTTGTAAAGGGTGCAGCCAAGCTCTGCAGA...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp AAGCCCAATCTTCATATAATGACTCTAACTTCCAGCCAAGTTGATTTGTTAAGTTCCCATTCCCCAAACTaGAGGCTTCCCCAGAACTGT +
Preference number: 4 (lower is better)
Translates to: KPNLHIMTLTSSQVDLLSSHSPN*RLPQNC
Trigger: ACAGTTCTGGGGAAGCCTGCAGTTTGGGGAATGGGA...ACTTAACAAATCAACTTGGCTGGAAGTTAGAGTCATTATATGAAGATTGGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATTTATACCATACTATATaGCAGGTGATGAGCATTCAG +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNLYHTI*QVMSIQ
Trigger: CTGAATGCTCATCACCTGGCATATAGTATGGTATAA...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS-3UTR CCA 90 bp AAGCCCAATCTTCATATAATGACTCTAACTTCCAGCCAAGTTGATTTGTTAAGTATGATGGTCTCGTACTaGTGGGCCAACTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KPNLHIMTLTSSQVDLLSMMVSY*WANCSS
Trigger: TGAGGAGCAGTTGGCCCACCAGTACGAGACCATCAT...ACTTAACAAATCAACTTGGCTGGAAGTTAGAGTCATTATATGAAGATTGGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTGTTGCTCAAATACTTaGCTTTCTAGATCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPCCSNT*LSRSEY
Trigger: ATACTCTGATCTAGAAAGCCAAGTATTTGAGCAACA...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACACACCTGGAGATAGCTaGATACCTGGAGAAATTGTA +
Preference number: 4 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHTPGDS*IPGEIV
Trigger: TACAATTTCTCCAGGTATCCAGCTATCTCCAGGTGT...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCCCAGTCATTGTAAACTaGCTAATGGGTCCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLAPVIVN*LMGPFA
Trigger: GGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CAA 72 bp CTTCATATAATGACTCTAACTTCCAGCCAAGTTGATTaGTTAAGTTGTTGGGCTCCAAGGAGCTTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LHIMTLTSSQVD*LSCWAPRSFLE
Trigger: CTCCAGAAAGCTCCTTGGAGCCCAACAACTTAACAAATCAACTTGGCTGGAAGTTAGAGTCATTATATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
3UTR CAA 72 bp AGTAGTAGCAATCCTTTTACACATGAAAGGTGCAGTTaGCGGATTGTAAGGTCATCGTACTCGGTGTTTATG +
Preference number: 4 (lower is better)
Translates to: SSSNPFTHERCS*RIVRSSYSVFM
Trigger: CATAAACACCGAGTACGATGACCTTACAATCCGCAAACTGCACCTTTCATGTGTAAAAGGATTGCTACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CAA 72 bp CTATTGGAAGAGTGTCAGTGCTACTCAAAATATGGCTaGAGAATTGATGCCATCTATGTCACCTGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: LLEECQCYSKYG*RIDAIYVTWEF
Trigger: AAACTCCCAGGTGACATAGATGGCATCAATTCTCAAGCCATATTTTGAGTAGCACTGACACTCTTCCAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CAA 72 bp GCTCACTGGAGTATTTTAGATATCAAATGTGCAGACTaGGGATGCTCAGCTGGTAGGTATAATGCCAATATC +
Preference number: 4 (lower is better)
Translates to: AHWSILDIKCAD*GCSAGRYNANI
Trigger: GATATTGGCATTATACCTACCAGCTGAGCATCCCAAGTCTGCACATTTGATATCTAAAATACTCCAGTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS-3UTR TCA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTGGTTTACTTGTTACATaGCCTCAGGATGATGTACTA +
Preference number: 4 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVGLLVT*PQDDVL
Trigger: TAGTACATCATCCTGAGGTCATGTAACAAGTAAACC...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp ACAATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGCATAAGGACAGGACCTaGGTGAAACCAAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: TMNYRMPQAYLSMKIFTRHKDRT*VKPSSF
Trigger: GAAACTGCTTGGTTTCACTCAGGTCCTGTCCTTATG...CCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGGATGGACCAAAAAGCTaGGACCAAATCTCACACACA +
Preference number: 4 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWDGPKS*DQISHT
Trigger: TGTGTGTGAGATTTGGTCTCAGCTTTTTGGTCCATC...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGTCCCACTGGAGAGAATaGAACCTGTTAATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWSHWRE*NLLILQ
Trigger: CTGAAGGATTAACAGGTTTCATTCTCTCCAGTGGGA...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAAAACATCTGCAGCAGATaGCCCTGGCTTCTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: LGVYGICFAVLLEECFNKNICSR*PWLLLE
Trigger: TTCCAAAAGAAGCCAGGGTCATCTGCTGCAGATGTT...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS-3UTR GCA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAATGAATTCATCCATTTaGTTGGGAGTTTTGATGTTG +
Preference number: 4 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRMNSSI*LGVLML
Trigger: CAACATCAAAACTCCCAAGCAAATGGATGAATTCAT...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp AAGCCCAATCTTCATATAATGACTCTAACTTCCAGCCAAGTTGATTTGTTAAGTTCCTCGCATAGTGTGTaGACTCACTGGAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: KPNLHIMTLTSSQVDLLSSSHSV*THWRIL
Trigger: GAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA...ACTTAACAAATCAACTTGGCTGGAAGTTAGAGTCATTATATGAAGATTGGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATTCAGAGTATCCTCAATaGTACTATGTCAATTTTCGA +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNSEYPQ*YYVNFR
Trigger: TCGAAAATTGACATAGTAGCATTGAGGATACTCTGA...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTATGTTGTTTGATTCTTaGCTGCAAAGAGTACCAGAG +
Preference number: 4 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVMLFDS*LQRVPE
Trigger: CTCTGGTACTCTTTGCAGGCAAGAATCAAACAACAT...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGTTAATATCCGCTCACTaGAAGTGGAATGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWLISAH*KWNEAG
Trigger: TCCTGCCTCATTCCACTTGCAGTGAGCGGATATTAA...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGGGTGTCTATGGGATTTaGTTTGCCGTTCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWGVYGI*FAVLLE
Trigger: CTCCAAAAGAACGGCAAAGCAAATCCCATAGACACC...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATGAAATGTGGCAAAACTaGCAAATCTCTAACTACTTA +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNEMWQN*QISNYL
Trigger: TAAGTAGTTAGAGATTTGGCAGTTTTGCCACATTTC...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTACCATTCAACTCATGTaGTCATTCATCGGTCTATTC +
Preference number: 4 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVTIQLM*SFIGLF
Trigger: GAATAGACCGATGAATGAGCACATGAGTTGAATGGT...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS-3UTR GCA 90 bp AAGCCCAATCTTCATATAATGACTCTAACTTCCAGCCAAGTTGATTTGTTAAGTACAGGTGTGAACCACTaGACCTGGCCTCCAAGATTT +
Preference number: 4 (lower is better)
Translates to: KPNLHIMTLTSSQVDLLSTGVNH*TWPPRF
Trigger: AAATCTTGGAGGCCAGGTGCAGTGGTTCACACCTGT...ACTTAACAAATCAACTTGGCTGGAAGTTAGAGTCATTATATGAAGATTGGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS-3UTR CCA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGATCAGAAGTGTTGCGTTaGGAAGTGTTGATTAGAAAT +
Preference number: 4 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRSEVLR*EVLIRN
Trigger: ATTTCTAATCAACACTTCCCAACGCAACACTTCTGA...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp GCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTAATTCATCCTCCCAACAGTCAGAAGTGTTGCGTTaGGAAGTGTTGATTAGAAAT +
Preference number: 4 (lower is better)
Translates to: AWIKQTAQCEFVNSSSQQSEVLR*EVLIRN
Trigger: ATTTCTAATCAACACTTCCCAACGCAACACTTCTGA...CTGTTGGGAGGATGAATTAACAAACTCACATTGTGCAGTCTGCTTAATCCAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAACATCTTCTTCTGGGTTaGACTCATTGCCGCGGTAAT +
Preference number: 4 (lower is better)
Translates to: LGVYGICFAVLLEECFNKHLLLG*THCRGN
Trigger: ATTACCGCGGCAATGAGTCCAACCCAGAAGAAGATG...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGAGTTCCTGTTGAACTTTaGATCTCAATGAATTCATCC +
Preference number: 4 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRVPVEL*ISMNSS
Trigger: GGATGAATTCATTGAGATCCAAAGTTCAACAGGAAC...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCCTCCCTGCCTTGGACTaGGAAGACTTGAAGTTAAAC +
Preference number: 4 (lower is better)
Translates to: LRLWKATISKLGIIKYIILPALD*EDLKLN
Trigger: GTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAG...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGCATTTGGAAGAACTGTaGCTACACTTCCCCATCCTT +
Preference number: 4 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWHLEEL*LHFPIL
Trigger: AAGGATGGGGAAGTGTAGCCACAGTTCTTCCAAATG...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ACTTCCCTGACAAGTCAAAGTACCACCTATTGGAAGAGTGTCAGTGCTACTCAAGTTTATGTTCAAAGCTaGACTTCAGGAAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: TSLTSQSTTYWKSVSATQVYVQS*TSGNSS
Trigger: AGAACTGTTTCCTGAAGTCCAGCTTTGAACATAAAC...TTGAGTAGCACTGACACTCTTCCAATAGGTGGTACTTTGACTTGTCAGGGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGGGAATTGCCCTTGATTaGCTAGGTGGCTGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWGIALD*LGGWFK
Trigger: TTTAAACCAGCCACCTAGCCAATCAAGGGCAATTCC...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATTTTTTGGTGGCGAATTaGAAAGCTATTTTTATAGGC +
Preference number: 4 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNFLVAN*KAIFIG
Trigger: GCCTATAAAAATAGCTTTCCAATTCGCCACCAAAAA...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGCTTCCAGGATTCAGATaGACCAAAAAGCTGAGACCA +
Preference number: 4 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWLPGFR*TKKLRP
Trigger: TGGTCTCAGCTTTTTGGTCCATCTGAATCCTGGAAG...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCGTGAACCACTGCACCTaGCCTCCAAGATTTCTATTT +
Preference number: 4 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLAVNHCT*PPRFLF
Trigger: AAATAGAAATCTTGGAGGCCAGGTGCAGTGGTTCAC...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS-3UTR TCA 90 bp ACAATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGTCATGGACTTGCTTaGGAATCATCCAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: TMNYRMPQAYLSMKIFTRCHGLA*ESSRLH
Trigger: ATGAAGCCTGGATGATTCTCAAGCAAGTCCATGACA...CCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp ACAATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGAGCCACCAATCATCTTaGGCCTTCCAATTCTATCCA +
Preference number: 4 (lower is better)
Translates to: TMNYRMPQAYLSMKIFTRSHQSS*AFQFYP
Trigger: TGGATAGAATTGGAAGGCTCAAGATGATTGGTGGCT...CCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGATTTGCATAATCCATTaGGAATGCCGAAGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWICIIH*ECRRLL
Trigger: CAACAGCCTTCGGCATTCTCAATGGATTATGCAAAT...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGTCCATAGTAACTGAATaGCATGGCAAACCAAACCAC +
Preference number: 4 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWSIVTE*HGKPNH
Trigger: GTGGTTTGGTTTGCCATGGCATTCAGTTACTATGGA...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR GCA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACAATGCTGGCAATATTTaGAGATACCAGTTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHNAGNI*RYQLWK
Trigger: TTTCCACAACTGGTATCTGCAAATATTGCCAGCATT...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCTTAAGAGCCCTTCCCTaGACCTTAATCTCTTTCATC +
Preference number: 4 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLALRALP*TLISFI
Trigger: GATGAAAGAGATTAAGGTGCAGGGAAGGGCTCTTAA...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAATCAGACCTCATTTCCTaGGACCTCAAACACCAAGTT +
Preference number: 4 (lower is better)
Translates to: LGVYGICFAVLLEECFNKSDLIS*DLKHQV
Trigger: AACTTGGTGTTTGAGGTCCCAGGAAATGAGGTCTGA...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACCTGTTTCAAAAGCTCTaGACACATAGCATAGATTTC +
Preference number: 4 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHLFQKL*THSIDF
Trigger: GAAATCTATGCTATGTGTCCAGAGCTTTTGAAACAG...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CAA 72 bp AAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTaGTTAATTCATCCTCCCAACAGAAAGTTAAATGGC +
Preference number: 4 (lower is better)
Translates to: KVPGLSRLHNVS*LIHPPNRKLNG
Trigger: GCCATTTAACTTTCTGTTGGGAGGATGAATTAACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
3UTR CAA 72 bp GAAACATCTTCCTCCACTGGCTACATGTCAGCACATTaGAACCAACAGTATTACAAATGCCTTCTATACCTA +
Preference number: 4 (lower is better)
Translates to: ETSSSTGYMSAH*NQQYYKCLLYL
Trigger: TAGGTATAGAAGGCATTTGTAATACTGTTGGTTCAAATGTGCTGACATGTAGCCAGTGGAGGAAGATGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCGTACCAGGTTCCTGTTaGACTTTGGATCTCAATGAA +
Preference number: 4 (lower is better)
Translates to: LRLWKATISKLGIIKYIIVPGSC*TLDLNE
Trigger: TTCATTGAGATCCAAAGTTCAACAGGAACCTGGTAC...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCCCCAAATCAGTCACCTaGGTTACAAACATATTGACA +
Preference number: 4 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLAPKSVT*VTNILT
Trigger: TGTCAATATGTTTGTAACTCAGGTGACTGATTTGGG...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR TCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGATTGTCAGACAGTTCTaGTGTTTTTCCTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWIVRQF*CFSSSM
Trigger: CATGGAAGAGGAAAAACATCAGAACTGTCTGACAAT...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGGCATTTCTCCAATACTaGGAAAACACTCGATATAGC +
Preference number: 4 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWAFLQY*ENTRYS
Trigger: GCTATATCGAGTGTTTTCTCAGTATTGGAGAAATGC...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCCAATCCTTTTACACATaGAAGGTGCAGTTTGCGGAT +
Preference number: 4 (lower is better)
Translates to: LRLWKATISKLGIIKYIIQSFYT*KVQFAD
Trigger: ATCCGCAAACTGCACCTTTCATGTGTAAAAGGATTG...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp AAGCCCAATCTTCATATAATGACTCTAACTTCCAGCCAAGTTGATTTGTTAAGTGCTCTAGGAAAATGGTaGTCATTTTTCACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: KPNLHIMTLTSSQVDLLSALGKW*SFFTGC
Trigger: GCAGCCTGTGAAAAATGATCACCATTTTCCTAGAGC...ACTTAACAAATCAACTTGGCTGGAAGTTAGAGTCATTATATGAAGATTGGGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAATCCATAGTAACTGAATaGCATGGCAAACCAAACCAC +
Preference number: 4 (lower is better)
Translates to: LGVYGICFAVLLEECFNKSIVTE*HGKPNH
Trigger: GTGGTTTGGTTTGCCATGGCATTCAGTTACTATGGA...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTTCAGAGTATCCTCAATaGTACTATGTCAATTTTCGA +
Preference number: 4 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVSEYPQ*YYVNFR
Trigger: TCGAAAATTGACATAGTAGCATTGAGGATACTCTGA...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGCTCAGTGATGGAAACTaGACTAAAAATCAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWLSDGN*TKNQGV
Trigger: GACTCCTTGATTTTTAGTGCAGTTTCCATCACTGAG...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGTTGGAAGAGTGTCAGTaGTACTCAAAATATGGCTTG +
Preference number: 4 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWLEECQ*YSKYGL
Trigger: CAAGCCATATTTTGAGTAGCACTGACACTCTTCCAA...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCTCTGTGGTAGAGGTTTaGGCTATTTCAATAACCATC +
Preference number: 4 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLASVVEV*AISITI
Trigger: GATGGTTATTGAAATAGCCCAAACCTCTACCACAGA...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CCA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAAGATTTGTTAAGTTGTTaGGCTCCAAGGAGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LGVYGICFAVLLEECFNKDLLSC*APRSFL
Trigger: CAGAAAGCTCCTTGGAGCCCAACAACTTAACAAATC...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTAGTTCTCCCAAAATATaGCTAAAATGCTGGCAATAT +
Preference number: 4 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVSSPKI*LKCWQY
Trigger: ATATTGCCAGCATTTTAGCCATATTTTGGGAGAACT...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAAAATGGTCTCAGGGAATaGCGAGTATTTGTCACATTG +
Preference number: 4 (lower is better)
Translates to: LGVYGICFAVLLEECFNKNGLRE*RVFVTL
Trigger: CAATGTGACAAATACTCGCCATTCCCTGAGACCATT...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCCATCATTCATCTTTTTaGAAATCTCGCTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LRLWKATISKLGIIKYIIHHSSF*KSRCCH
Trigger: GTGGCAGCAGCGAGATTTCCAAAAAGATGAATGATG...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACTGCACACACTATGGATaGTTTGTTTTCTACTTTTAC +
Preference number: 4 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHCTHYG*FVFYFY
Trigger: GTAAAAGTAGAAAACAAACCATCCATAGTGTGTGCA...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAAACACCTGGAGATAGCTaGATACCTGGAGAAATTGTA +
Preference number: 4 (lower is better)
Translates to: LGVYGICFAVLLEECFNKTPGDS*IPGEIV
Trigger: TACAATTTCTCCAGGTATCCAGCTATCTCCAGGTGT...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCCTGGTCCCAAACATTTaGGATAAGGAATACTCAGTC +
Preference number: 4 (lower is better)
Translates to: LRLWKATISKLGIIKYIILVPNI*DKEYSV
Trigger: GACTGAGTATTCCTTATCCCAAATGTTTGGGACCAG...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS-3UTR CCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGCTTTTGGAAGAGGTTTaGTGGGGTGATTATACCATA +
Preference number: 4 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWLLEEV*WGDYTI
Trigger: TATGGTATAATCACCCCACCAAACCTCTTCCAAAAG...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS-3UTR TCA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGAACTTTGGATCTCAATaGATTCATCCATTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWNFGSQ*IHPFAW
Trigger: CCAAGCAAATGGATGAATTCATTGAGATCCAAAGTT...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCTACATGACCTCAGGATaGTGTACTACAAACTTCACA +
Preference number: 4 (lower is better)
Translates to: LRLWKATISKLGIIKYIIYMTSG*CTTNFT
Trigger: TGTGAAGTTTGTAGTACATCATCCTGAGGTCATGTA...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGATATTCCTCCTTCCTTaGAACCTGAAATTCATGGAT +
Preference number: 4 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWIFLLP*NLKFMD
Trigger: ATCCATGAATTTCAGGTTTCAAGGAAGGAGGAATAT...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGATATTCCTCCTTCCTTaGAACCTGAAATTCATGGAT +
Preference number: 4 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWIFLLP*NLKFMD
Trigger: ATCCATGAATTTCAGGTTTCAAGGAAGGAGGAATAT...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCCTCAGTGATGGAAACTaGACTAAAAATCAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: LRLWKATISKLGIIKYIILSDGN*TKNQGV
Trigger: GACTCCTTGATTTTTAGTGCAGTTTCCATCACTGAG...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAATCTGTGGTAGAGGTTTaGGCTATTTCAATAACCATC +
Preference number: 4 (lower is better)
Translates to: LGVYGICFAVLLEECFNKSVVEV*AISITI
Trigger: GATGGTTATTGAAATAGCCCAAACCTCTACCACAGA...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCGTTTATGTTCAAAGCTaGACTTCAGGAAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLAVYVQS*TSGNSS
Trigger: AGAACTGTTTCCTGAAGTCCAGCTTTGAACATAAAC...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp ACAATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGACTCAAAATATGGCTTaGGAATTGATGCCATCTATG +
Preference number: 4 (lower is better)
Translates to: TMNYRMPQAYLSMKIFTRTQNMA*ELMPSM
Trigger: CATAGATGGCATCAATTCTCAAGCCATATTTTGAGT...CCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR TCA 90 bp ACAATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTTAATTATCTCAGGTTaGAGGTGCGTTACAGAAAGA +
Preference number: 4 (lower is better)
Translates to: TMNYRMPQAYLSMKIFTRLIISG*RCVTER
Trigger: TCTTTCTGTAACGCACCTTCAACCTGAGATAATTAA...CCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR GCA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGATAAATTCCTCACCATaGCTCTGCAAATCAAACAAA +
Preference number: 4 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWINSSP*LCKSNK
Trigger: TTTGTTTGATTTGCAGAGGCATGGTGAGGAATTTAT...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ACAATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGATCTCAAATCGACGGTaGAAAGGTGTCATAAGATTT +
Preference number: 4 (lower is better)
Translates to: TMNYRMPQAYLSMKIFTRISNRR*KGVIRF
Trigger: AAATCTTATGACACCTTTCCACCGTCGATTTGAGAT...CCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGTCATTTTTGCATTTTTaGTGGCGAATTGGAAAGCTA +
Preference number: 4 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWSFLHF*WRIGKL
Trigger: TAGCTTTCCAATTCGCCACCAAAAATGCAAAAATGA...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGTCACTTTTAGTATTTTaGGTGTCTATGGGATTTGCT +
Preference number: 4 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWSLLVF*VSMGFA
Trigger: AGCAAATCCCATAGACACCCAAAATACTAAAAGTGA...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CCA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCTGTTGCTCAAATACTTaGCTTTCTAGATCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: LRLWKATISKLGIIKYIICCSNT*LSRSEY
Trigger: ATACTCTGATCTAGAAAGCCAAGTATTTGAGCAACA...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS CCA 90 bp CTGGGTGTGGGGCAGGGCCCTCTCTGGACTGAGAGTCTTAGGACCTaGGTGGCAAATCCGCTGGCGGCCGCCTCCGGATGCAGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: LGVGQGPLWTESLRT*VANPLAAASGCRQS
Trigger: GCTCTGCCTGCATCCGGAGGCGGCCGCCAGCGGATTTGCCACCCAGGTCCTAAGACTCTCAGTCCAGAGAGGGCCCTGCCCCACACCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557410.5
CDS GCA 90 bp CCATGGCCACACTCATCCATGATGGTCTCGTACTGGTGGGCCAACTaGTCCTCATCTTCCAGCCTCTCAGCCATCAGGTCTGTCTGGCCC +
Preference number: 5 (lower is better)
Translates to: PWPHSSMMVSYWWAN*SSSSSLSAIRSVWP
Trigger: GGGCCAGACAGACCTGATGGCTGAGAGGCTGGAAGATGAGGAGCAGTTGGCCCACCAGTACGAGACCATCATGGATGAGTGTGGCCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGGGGAGCGAGCAGGACTaGGCAGACTGCGTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKGSEQD*ADCVLA
Trigger: GGCCAGCACGCAGTCTGCCAAGTCCTGCTCGCTCCC...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS TCA 90 bp TTCTTGACAGGGAGCGAGCAGGACTTGGCAGACTGCGTGCTGGCCTaGTTTGTCCTGCCACCGAAGGTTATGCTCTGGGTGGCAAATCCG +
Preference number: 5 (lower is better)
Translates to: FLTGSEQDLADCVLA*FVLPPKVMLWVANP
Trigger: CGGATTTGCCACCCAGAGCATAACCTTCGGTGGCAGGACAAATCAGGCCAGCACGCAGTCTGCCAAGTCCTGCTCGCTCCCTGTCAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS CCA 90 bp CTGCCACCGAAGGTTATGCTCTGTCTAGATTCCTCTGGTCATCTCTaGGCAGCATTCCTTCCTTCTGGGTGTGGGGCAGGGCCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: LPPKVMLCLDSSGHL*AAFLPSGCGAGPSL
Trigger: CAGAGAGGGCCCTGCCCCACACCCAGAAGGAAGGAATGCTGCCCAGAGATGACCAGAGGAATCTAGACAGAGCATAACCTTCGGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557410.5
CDS-3UTR CAA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCGAGGCGAAGGAGGCATaGACGGCCAGAGACATGCTG +
Preference number: 5 (lower is better)
Translates to: EMLAPRIVCALTGESSPCEAKEA*TARDML
Trigger: CAGCATGTCTCTGGCCGTCAATGCCTCCTTCGCCTC...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCCACCTCCGCTGGCAGTaGTGCGTAGCTCACTGTCCC +
Preference number: 5 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFHLRWQ*CVAHCP
Trigger: GGGACAGTGAGCTACGCACAACTGCCAGCGGAGGTG...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS TCA 90 bp CATCATGTTTGCCCATCTCTAGCAGAAACCTTGGGCTCTCTGGCATaGACTTCAGGGCCACCATGGACACGGTGCAGGGCAGAGCACAGA +
Preference number: 5 (lower is better)
Translates to: HHVCPSLAETLGSLA*TSGPPWTRCRAEHR
Trigger: TCTGTGCTCTGCCCTGCACCGTGTCCATGGTGGCCCTGAAGTTCATGCCAGAGAGCCCAAGGTTTCTGCTAGAGATGGGCAAACATGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000553727.1
ENST00000557410.5
CDS GCA 90 bp GGTGGGATACAGCTCCACTGTGATCACATCCAGAGCATTCCAGGCTaGAATGCTTGTCCCACAGAACAGGCACTGCCAGCCGATCATTGC +
Preference number: 5 (lower is better)
Translates to: GGIQLHCDHIQSIPG*NACPTEQALPADHC
Trigger: GCAATGATCGGCTGGCAGTGCCTGTTCTGTGGGACAAGCATTGCAGCCTGGAATGCTCTGGATGTGATCACAGTGGAGCTGTATCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS CCA 90 bp CCTTTTCCCATAGGTTGTTCACATCAGGACCTGTTCTCGAGTCTCTaGCAGTCGAAGGGCAATCAGGCCACCCCCAACCAGAGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: PFPIGCSHQDLFSSL*QSKGNQATPNQRSS
Trigger: GCTGCTTCTCTGGTTGGGGGTGGCCTGATTGCCCTTCGACTGCCAGAGACTCGAGAACAGGTCCTGATGTGAACAACCTATGGGAAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGACTGCCAGCCGATCATaGCAGACTCACTGTTGCCAA +
Preference number: 5 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGTASRS*QTHCCQ
Trigger: TTGGCAACAGTGAGTCTGCAATGATCGGCTGGCAGT...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS TCA 90 bp TGCCGAAGGCTGTTGCTCTCTGGTTGGTGGGATACAGCTCCACTGTaGTCACATCCAGAGCATTCCAGGCTGCAATGCTTGTCCCACAGA +
Preference number: 5 (lower is better)
Translates to: CRRLLLSGWWDTAPL*SHPEHSRLQCLSHR
Trigger: TCTGTGGGACAAGCATTGCAGCCTGGAATGCTCTGGATGTGATCACAGTGGAGCTGTATCCCACCAACCAGAGAGCAACAGCCTTCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS TCA 90 bp TTCTTGACAGGGAGCGAGCAGGACTTGGCAGACTGCGTGCTGGCCTaGTTTGTCCTGCCACCGAAGGTTATGCTCTGTCTAGATTCCTCT +
Preference number: 5 (lower is better)
Translates to: FLTGSEQDLADCVLA*FVLPPKVMLCLDSS
Trigger: AGAGGAATCTAGACAGAGCATAACCTTCGGTGGCAGGACAAATCAGGCCAGCACGCAGTCTGCCAAGTCCTGCTCGCTCCCTGTCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557410.5
CDS-3UTR CAA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTGCGTGCTGGCCTGATTaGTCCTGCCACCGAAGGTTA +
Preference number: 5 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPACWPD*SCHRRL
Trigger: TAACCTTCGGTGGCAGGACAAATCAGGCCAGCACGC...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTTCTGCGACTGCCTGGTaGCCCCTTGAGCTATATCCC +
Preference number: 5 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKISATAW*PLELYP
Trigger: GGGATATAGCTCAAGGGGCAACCAGGCAGTCGCAGA...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGGCCATCTTGGCCTGCTaGGCCTTGACATCATCTGGG +
Preference number: 5 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWAILAC*ALTSSG
Trigger: CCCAGATGATGTCAAGGCCAAGCAGGCCAAGATGGC...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCGCCATCTTGGCCTGCTaGGCCTTGACATCATCTGGG +
Preference number: 5 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFAILAC*ALTSSG
Trigger: CCCAGATGATGTCAAGGCCAAGCAGGCCAAGATGGC...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCGAGGCGAAGGAGGCATaGACGGCCAGAGACATGCTG +
Preference number: 5 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTEAKEA*TARDML
Trigger: CAGCATGTCTCTGGCCGTCAATGCCTCCTTCGCCTC...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCGCTGTTGCTCTCTGGTaGGTGGGATACAGCTCCACT +
Preference number: 5 (lower is better)
Translates to: EMLAPRIVCALTGESSPCAVALW*VGYSST
Trigger: AGTGGAGCTGTATCCCACCAACCAGAGAGCAACAGC...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATGAATGCCGAAGGCTGTaGCTCTCTGGTTGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYECRRL*LSGWWD
Trigger: ATCCCACCAACCAGAGAGCAACAGCCTTCGGCATTC...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTGGGAGCGAGCAGGACTaGGCAGACTGCGTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVGSEQD*ADCVLA
Trigger: GGCCAGCACGCAGTCTGCCAAGTCCTGCTCGCTCCC...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTATCCAGCTGTTTTTCTaGACAGGGAGCGAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPIQLFF*TGSEQD
Trigger: GTCCTGCTCGCTCCCTGTCAAGAAAAACAGCTGGAT...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAACTGCCTGGTTGCCCCTaGAGCTATATCCCTCGCTCT +
Preference number: 5 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKLPGCP*SYIPRS
Trigger: AGAGCGAGGGATATAGCTCAAGGGGCAACCAGGCAG...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTGCCATCTTGGCCTGCTaGGCCTTGACATCATCTGGG +
Preference number: 5 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFAILAC*ALTSSG
Trigger: CCCAGATGATGTCAAGGCCAAGCAGGCCAAGATGGC...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTGAGGCGAAGGAGGCATaGACGGCCAGAGACATGCTG +
Preference number: 5 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPEAKEA*TARDML
Trigger: CAGCATGTCTCTGGCCGTCAATGCCTCCTTCGCCTC...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGCAGGAAGTCATTATCTaGCTCCAAGTCCATGTGGCA +
Preference number: 5 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGQEVII*LQVHVA
Trigger: TGCCACATGGACTTGGAGCAAGATAATGACTTCCTG...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGTCCAGGCTGCAATGCTaGTCCCACAGAACAGGCACT +
Preference number: 5 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWSRLQC*SHRTGT
Trigger: AGTGCCTGTTCTGTGGGACAAGCATTGCAGCCTGGA...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTGAATGCCGAAGGCTGTaGCTCTCTGGTTGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPECRRL*LSGWWD
Trigger: ATCCCACCAACCAGAGAGCAACAGCCTTCGGCATTC...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGGAATGCCGAAGGCTGTaGCTCTCTGGTTGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWECRRL*LSGWWD
Trigger: ATCCCACCAACCAGAGAGCAACAGCCTTCGGCATTC...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCGAATGCCGAAGGCTGTaGCTCTCTGGTTGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFECRRL*LSGWWD
Trigger: ATCCCACCAACCAGAGAGCAACAGCCTTCGGCATTC...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGTAGTGCACCTCCGCTGGCAGTaGTGCGTAGCTCACTGTCCC +
Preference number: 5 (lower is better)
Translates to: LQRVPEATEHISHCFWVVHLRWQ*CVAHCP
Trigger: GGGACAGTGAGCTACGCACAACTGCCAGCGGAGGTG...CACTACCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATGGGAAAATGTGGCACTaGCCCATTGAGAGCACTGCA +
Preference number: 5 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYGKMWH*PIESTA
Trigger: TGCAGTGCTCTCAATGGGCAAGTGCCACATTTTCCC...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTCCAGAATGCTGTACATaGTCCCCCAGTGACCTGCCA +
Preference number: 5 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPPECCT*SPSDLP
Trigger: TGGCAGGTCACTGGGGGACAATGTACAGCATTCTGG...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCCAGAATGCTGTACATaGTCCCCCAGTGACCTGCCA +
Preference number: 5 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKIPECCT*SPSDLP
Trigger: TGGCAGGTCACTGGGGGACAATGTACAGCATTCTGG...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCGGAGGGAACGCTGGGTaGGGGTTTACTTGTTACATG +
Preference number: 5 (lower is better)
Translates to: EMLAPRIVCALTGESSPCGGNAG*GFTCYM
Trigger: CATGTAACAAGTAAACCCCAACCCAGCGTTCCCTCC...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGTAGTGCTGTGTCCCCAGGGCTaGGCAGAGAGACTGGCCCAT +
Preference number: 5 (lower is better)
Translates to: LQRVPEATEHISHCFWVVLCPQG*AERLAH
Trigger: ATGGGCCAGTCTCTCTGCCAAGCCCTGGGGACACAG...CACTACCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCCAAGGCACAGCCCCTTaGCCCATTGCCCTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILQGTAP*PIALPS
Trigger: AGAAGGAAGGGCAATGGGCAAAGGGGCTGTGCCTTG...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAACAAGGCACAGCCCCTTaGCCCATTGCCCTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKQGTAP*PIALPS
Trigger: AGAAGGAAGGGCAATGGGCAAAGGGGCTGTGCCTTG...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGCCTGGGAGGTGGAGATaGCAGCAAGCCAAGATTGCA +
Preference number: 5 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKPGRWR*QQAKIA
Trigger: TGCAATCTTGGCTTGCTGCAATCTCCACCTCCCAGG...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTTTCATGACTCACAGCTaGTGGCCGTGTCCTCCGCTT +
Preference number: 5 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPFMTHS*WPCPPL
Trigger: AAGCGGAGGACACGGCCACAAGCTGTGAGTCATGAA...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS GCA 90 bp CTGATACTTGTAGTCATCCATTCCTTGGTTCTGCGACTGCCTGGTTaGCCCTTGAGCTATATCCCTCGCTCTGTGGTAGAGGTTTGGGCT +
Preference number: 5 (lower is better)
Translates to: LILVVIHSLVLRLPG*PLSYIPRSVVEVWA
Trigger: AGCCCAAACCTCTACCACAGAGCGAGGGATATAGCTCAAGGGGCAACCAGGCAGTCGCAGAACCAAGGAATGGATGACTACAAGTATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp ACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTGCGTGCTGGCCTGATTaGTCCTGCCACCGAAGGTTA +
Preference number: 5 (lower is better)
Translates to: TVIGRKCGCISVSWTRFSACWPD*SCHRRL
Trigger: TAACCTTCGGTGGCAGGACAAATCAGGCCAGCACGC...AGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp ACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTTCTGCGACTGCCTGGTaGCCCCTTGAGCTATATCCC +
Preference number: 5 (lower is better)
Translates to: TVIGRKCGCISVSWTRFSSATAW*PLELYP
Trigger: GGGATATAGCTCAAGGGGCAACCAGGCAGTCGCAGA...AGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GGAGAATCCTCTCCCTGCCTTGGACTGGGAAGACTTGAAGTTAAACACGCAGCTGTAGTCATCCATTCCTaGGTTCTGCGACTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: GESSPCLGLGRLEVKHAAVVIHS*VLRLPG
Trigger: ACCAGGCAGTCGCAGAACCAAGGAATGGATGACTAC...AGCTGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGCCTAGCATTCCTTTTTaGGAACTGGACAGACACATG +
Preference number: 5 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGPSIPF*ELDRHM
Trigger: CATGTGTCTGTCCAGTTCCAAAAAAGGAATGCTAGG...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GGAGAATCCTCTCCCTGCCTTGGACTGGGAAGACTTGAAGTTAAACACGCAGCTACTGCCAGCCGATCATaGCAGACTCACTGTTGCCAA +
Preference number: 5 (lower is better)
Translates to: GESSPCLGLGRLEVKHAATASRS*QTHCCQ
Trigger: TTGGCAACAGTGAGTCTGCAATGATCGGCTGGCAGT...AGCTGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTACTGCCAGCCGATCATaGCAGACTCACTGTTGCCAA +
Preference number: 5 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKITASRS*QTHCCQ
Trigger: TTGGCAACAGTGAGTCTGCAATGATCGGCTGGCAGT...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTCCAGGCTGCAATGCTaGTCCCACAGAACAGGCACT +
Preference number: 5 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTSRLQC*SHRTGT
Trigger: AGTGCCTGTTCTGTGGGACAAGCATTGCAGCCTGGA...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCCCTCAGTCCCCATGTaGTTTGATTCTTGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: EMLAPRIVCALTGESSPCPSVPM*FDSCLQ
Trigger: TTGCAGGCAAGAATCAAACAACATGGGGACTGAGGG...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCGGGAATGGCGAGTATTaGTCACATTGTCCCATTCCC +
Preference number: 5 (lower is better)
Translates to: EMLAPRIVCALTGESSPCGNGEY*SHCPIP
Trigger: GGGAATGGGACAATGTGACAAATACTCGCCATTCCC...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTTCACCAATGTCCCTCTaGCATTCCTGGCCCCTATCT +
Preference number: 5 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPSPMSL*HSWPLS
Trigger: AGATAGGGGCCAGGAATGCAAGAGGGACATTGGTGA...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTGCCAAGACCCTCAATTaGGAGGAGGGGCAGCAATGT +
Preference number: 5 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFAKTLN*EEGQQC
Trigger: ACATTGCTGCCCCTCCTCCAAATTGAGGGTCTTGGC...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCGCCAAGACCCTCAATTaGGAGGAGGGGCAGCAATGT +
Preference number: 5 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTAKTLN*EEGQQC
Trigger: ACATTGCTGCCCCTCCTCCAAATTGAGGGTCTTGGC...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTACATCTAGTCATGTCTaGATCACCCCCGTGCATCCC +
Preference number: 5 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPTSSHV*ITPVHP
Trigger: GGGATGCACGGGGGTGATCAAGACATGACTAGATGT...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGCATATGACACTTCACTaGCTCCTCACCATTCAACTC +
Preference number: 5 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGHMTLH*LLTIQL
Trigger: GAGTTGAATGGTGAGGAGCAAGTGAAGTGTCATATG...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS TCA 90 bp TTGCGTTGGGAAGTGTTGATTAGAAATGGATCCAGCTGTTTTTCTTaGCAGGGAGCGAGCAGGACTTGGCAGACTGCGTGCTGGCCTGAT +
Preference number: 5 (lower is better)
Translates to: LRWEVLIRNGSSCFS*QGASRTWQTACWPD
Trigger: ATCAGGCCAGCACGCAGTCTGCCAAGTCCTGCTCGCTCCCTGTCAAGAAAAACAGCTGGATCCATTTCTAATCAACACTTCCCAACGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS TCA 90 bp ATAGGTCGGGGACCCAGGGAGAAGCAGACAGAAGTTCATCTGCTCTaGAACTCCCTCAGAATTTTCCAGAGTCCCTGCCTTTGTGAAGTG +
Preference number: 5 (lower is better)
Translates to: IGRGPREKQTEVHLL*NSLRIFQSPCLCEV
Trigger: CACTTCACAAAGGCAGGGACTCTGGAAAATTCTGAGGGAGTTTCAGAGCAGATGAACTTCTGTCTGCTTCTCCCTGGGTCCCCGACCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557291.1
CDS-3UTR CAA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGAGAGGCGAAGGAGGCATaGACGGCCAGAGACATGCTG +
Preference number: 5 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLREAKEA*TARDML
Trigger: CAGCATGTCTCTGGCCGTCAATGCCTCCTTCGCCTC...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCCCTTAGCTCTCATGTaGGTGTCATGGACTTGCTTG +
Preference number: 5 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKIPLALM*VSWTCL
Trigger: CAAGCAAGTCCATGACACCAACATGAGAGCTAAGGG...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTGCTTGAAAATGGTCTaGAATCTGACCAGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFCLKMV*NLTSQR
Trigger: GCGCTGGCTGGTCAGATTCAAGACCATTTTCAAGCA...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTTCCATCGTGAAGTaGATTGTGGCGCCGTACACA +
Preference number: 5 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYFSIVK*IVAPYT
Trigger: TGTGTACGGCGCCACAATCAACTTCACGATGGAAAA...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp ACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTGCTGTTGCTCTCTGGTaGGTGGGATACAGCTCCACT +
Preference number: 5 (lower is better)
Translates to: TVIGRKCGCISVSWTRFSAVALW*VGYSST
Trigger: AGTGGAGCTGTATCCCACCAACCAGAGAGCAACAGC...AGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTGCTGTTGCTCTCTGGTaGGTGGGATACAGCTCCACT +
Preference number: 5 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRAAVALW*VGYSST
Trigger: AGTGGAGCTGTATCCCACCAACCAGAGAGCAACAGC...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTAGCCCCCAAATTATaGCAGCCACCCCAGCACTCC +
Preference number: 5 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPLAPKL*QPPQHS
Trigger: GGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAA...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTCCAGAATGCTGTACATaGTCCCCCAGTGACCTGCCA +
Preference number: 5 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRAPECCT*SPSDLP
Trigger: TGGCAGGTCACTGGGGGACAATGTACAGCATTCTGG...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCGGAGGGAACGCTGGGTaGGGGTTTACTTGTTACATG +
Preference number: 5 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTGGNAG*GFTCYM
Trigger: CATGTAACAAGTAAACCCCAACCCAGCGTTCCCTCC...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTCTGTGTCCCCAGGGCTaGGCAGAGAGACTGGCCCAT +
Preference number: 5 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVLCPQG*AERLAH
Trigger: ATGGGCCAGTCTCTCTGCCAAGCCCTGGGGACACAG...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGTCACCAATGTCCCTCTaGCATTCCTGGCCCCTATCT +
Preference number: 5 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSSPMSL*HSWPLS
Trigger: AGATAGGGGCCAGGAATGCAAGAGGGACATTGGTGA...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTATCCTTTCTGGCTTTaGTCCTTCGAGCCAAGACCC +
Preference number: 5 (lower is better)
Translates to: RTVIGRKCGCISVSWTRFYPFWL*SFEPRP
Trigger: GGGTCTTGGCTCGAAGGACAAAAGCCAGAAAGGATA...GAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATGGGTGTCTATGGGATTaGCTTTGCCGTTCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYGCLWD*LCRSFG
Trigger: TCCAAAAGAACGGCAAAGCAAATCCCATAGACACCC...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS GCA 90 bp ATAGATCTCGTCTTCCTCATCATGGCCTTCGGTGACATCACTCTGTaGATCTTCTTCTGGGTTGGACTCATTGCCGCGGTAATAGCCATC +
Preference number: 5 (lower is better)
Translates to: IDLVFLIMAFGDITL*IFFWVGLIAAVIAI
Trigger: GATGGCTATTACCGCGGCAATGAGTCCAACCCAGAAGAAGATGCACAGAGTGATGTCACCGAAGGCCATGATGAGGAAGACGAGATCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTATCCAGCTGTTTTTCTaGACAGGGAGCGAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFIQLFF*TGSEQD
Trigger: GTCCTGCTCGCTCCCTGTCAAGAAAAACAGCTGGAT...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATAGAGACTCAGAAGTGTaGCGTTGGGAAGTGTTGATT +
Preference number: 5 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYRDSEV*RWEVLI
Trigger: AATCAACACTTCCCAACGCAACACTTCTGAGTCTCT...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTAATTCATCCTCCCAACAGTCTGCGACTGCCTGGTaGCCCCTTGAGCTATATCCC +
Preference number: 5 (lower is better)
Translates to: AWIKQTAQCEFVNSSSQQSATAW*PLELYP
Trigger: GGGATATAGCTCAAGGGGCAACCAGGCAGTCGCAGA...CTGTTGGGAGGATGAATTAACAAACTCACATTGTGCAGTCTGCTTAATCCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTGTAGTCATCCATTCCTaGGTTCTGCGACTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRAVVIHS*VLRLPG
Trigger: ACCAGGCAGTCGCAGAACCAAGGAATGGATGACTAC...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GGAGAATCCTCTCCCTGCCTTGGACTGGGAAGACTTGAAGTTAAACACGCAGCTCAGGCTTCATCATGTTaGCCCATCTCTAGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: GESSPCLGLGRLEVKHAAQASSC*PISSRN
Trigger: GTTTCTGCTAGAGATGGGCAAACATGATGAAGCCTG...AGCTGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTGCTTGAAAATGGTCTaGAATCTGACCAGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILCLKMV*NLTSQR
Trigger: GCGCTGGCTGGTCAGATTCAAGACCATTTTCAAGCA...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGTGCTTGAAAATGGTCTaGAATCTGACCAGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSCLKMV*NLTSQR
Trigger: GCGCTGGCTGGTCAGATTCAAGACCATTTTCAAGCA...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CCAGTCATTGTAAACTGGCTAATGGGTCCCTTTGCCTATCACCTGCACCCTCCTTTTTCCATCGTGAAGTaGATTGTGGCGCCGTACACA +
Preference number: 5 (lower is better)
Translates to: PVIVNWLMGPFAYHLHPPFSIVK*IVAPYT
Trigger: TGTGTACGGCGCCACAATCAACTTCACGATGGAAAA...AGGAGGGTGCAGGTGATAGGCAAAGGGACCCATTAGCCAGTTTACAATGACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGTAGTGGCTGTTGCTCTCTGGTaGGTGGGATACAGCTCCACT +
Preference number: 5 (lower is better)
Translates to: LQRVPEATEHISHCFWVVAVALW*VGYSST
Trigger: AGTGGAGCTGTATCCCACCAACCAGAGAGCAACAGC...CACTACCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCAAGACTTCAGTCTATaGCTGACCTTCATCAGAGAG +
Preference number: 5 (lower is better)
Translates to: EMLAPRIVCALTGESSPCQDFSL*LTFIRE
Trigger: CTCTCTGATGAAGGTCAGCAATAGACTGAAGTCTTG...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAATGTGGCACTTGCCCATaGAGAGCACTGCAAATCAAC +
Preference number: 5 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKCGTCP*RALQIN
Trigger: GTTGATTTGCAGTGCTCTCAATGGGCAAGTGCCACA...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAATATCCTTTCTGGCTTTaGTCCTTCGAGCCAAGACCC +
Preference number: 5 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKYPFWL*SFEPRP
Trigger: GGGTCTTGGCTCGAAGGACAAAAGCCAGAAAGGATA...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGAACATCTAGTCATGTCTaGATCACCCCCGTGCATCCC +
Preference number: 5 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRTSSHV*ITPVHP
Trigger: GGGATGCACGGGGGTGATCAAGACATGACTAGATGT...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGCTTAATTATCTCAGGTaGAAGGTGCGTTACAGAAAG +
Preference number: 5 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGLNYLR*KVRYRK
Trigger: CTTTCTGTAACGCACCTTCAACCTGAGATAATTAAG...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS GCA 90 bp AGGAAGTCATTATCTTGCTCCAAGTCCATGTGGCAGCCCTCCTTCTaGTCCAGGAAGGTGGAGTTGATAAACCGACAGTTGATGAACTTG +
Preference number: 5 (lower is better)
Translates to: RKSLSCSKSMWQPSF*SRKVELINRQLMNL
Trigger: CAAGTTCATCAACTGTCGGTTTATCAACTCCACCTTCCTGGAGCAGAAGGAGGGCTGCCACATGGACTTGGAGCAAGATAATGACTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGTGCACTCGATGTCTGTaGGAAGTCTGGAAAGTTTCA +
Preference number: 5 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKCTRCL*EVWKVS
Trigger: TGAAACTTTCCAGACTTCCAACAGACATCGAGTGCA...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGTAGTCATCCATTCCTaGGTTCTGCGACTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRVVIHS*VLRLPG
Trigger: ACCAGGCAGTCGCAGAACCAAGGAATGGATGACTAC...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAAGTGTCATGGACTTGCTaGAGAATCATCCAGGCTTCA +
Preference number: 5 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKVSWTC*RIIQAS
Trigger: TGAAGCCTGGATGATTCTCAAGCAAGTCCATGACAC...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCGTGTCATGGACTTGCTaGAGAATCATCCAGGCTTCA +
Preference number: 5 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILVSWTC*RIIQAS
Trigger: TGAAGCCTGGATGATTCTCAAGCAAGTCCATGACAC...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CTTGCCTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGCCCTTAGCTCTCATGTaGGTGTCATGGACTTGCTTG +
Preference number: 5 (lower is better)
Translates to: LACKEYQRPLNTSHIVFGPLALM*VSWTCL
Trigger: CAAGCAAGTCCATGACACCAACATGAGAGCTAAGGG...CCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTCCCTTAGCTCTCATGTaGGTGTCATGGACTTGCTTG +
Preference number: 5 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPPLALM*VSWTCL
Trigger: CAAGCAAGTCCATGACACCAACATGAGAGCTAAGGG...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GAAATGCTTGCTCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCTTGGGAGTTTTGATGTaGGAAACCGTGAACACTTTC +
Preference number: 5 (lower is better)
Translates to: EMLAPRIVCALTGESSPCLGVLM*ETVNTF
Trigger: GAAAGTGTTCACGGTTTCCAACATCAAAACTCCCAA...GCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGAGCAAGCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGTTTTCCATCGTGAAGTaGATTGTGGCGCCGTACACA +
Preference number: 5 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSFSIVK*IVAPYT
Trigger: TGTGTACGGCGCCACAATCAACTTCACGATGGAAAA...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTTTTCCATCGTGAAGTaGATTGTGGCGCCGTACACA +
Preference number: 5 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILFSIVK*IVAPYT
Trigger: TGTGTACGGCGCCACAATCAACTTCACGATGGAAAA...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCCAGGAAGGTGGAGTaGATAAACCGACAGTTGATG +
Preference number: 5 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILSRKVE*INRQLM
Trigger: CATCAACTGTCGGTTTATCAACTCCACCTTCCTGGA...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAATCCAGGAAGGTGGAGTaGATAAACCGACAGTTGATG +
Preference number: 5 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKSRKVE*INRQLM
Trigger: CATCAACTGTCGGTTTATCAACTCCACCTTCCTGGA...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGGAGCCACCAATCATCTaGAGCCTTCCAATTCTATCC +
Preference number: 5 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSEPPII*SLPILS
Trigger: GGATAGAATTGGAAGGCTCAAGATGATTGGTGGCTC...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCGAGCCACCAATCATCTaGAGCCTTCCAATTCTATCC +
Preference number: 5 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILEPPII*SLPILS
Trigger: GGATAGAATTGGAAGGCTCAAGATGATTGGTGGCTC...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTTCCTTTTCCCATAGGTaGTTCACATCAGGACCTGTT +
Preference number: 5 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKISFSHR*FTSGPV
Trigger: AACAGGTCCTGATGTGAACAACCTATGGGAAAAGGA...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATCAGTGGTATATATATTaGGAGGAATCAGGGTGTCCA +
Preference number: 5 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYQWYIY*EESGCP
Trigger: TGGACACCCTGATTCCTCCAAATATATATACCACTG...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTGGGAATGGCGAGTATTaGTCACATTGTCCCATTCCC +
Preference number: 5 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFGNGEY*SHCPIP
Trigger: GGGAATGGGACAATGTGACAAATACTCGCCATTCCC...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp TCCTCGCATAGTGTGTGCACTCACTGGAGAATCCTCTCCCTGCCTTGGACTGGGCGTTACCTCACTTACTaGTCATTTTTGCATTTTTGG +
Preference number: 5 (lower is better)
Translates to: SSHSVCTHWRILSLPWTGRYLTY*SFLHFW
Trigger: CCAAAAATGCAAAAATGACAAGTAAGTGAGGTAACG...CCCAGTCCAAGGCAGGGAGAGGATTCTCCAGTGAGTGCACACACTATGCGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAAGGGTGTCTATGGGATTaGCTTTGCCGTTCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKGCLWD*LCRSFG
Trigger: TCCAAAAGAACGGCAAAGCAAATCCCATAGACACCC...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GGAGAATCCTCTCCCTGCCTTGGACTGGGAAGACTTGAAGTTAAACACGCAGCTGTAGCTATTTGGCCTTaGACAAGTGACTTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: GESSPCLGLGRLEVKHAAVAIWP*TSDFPV
Trigger: CACAGGAAAGTCACTTGTCAAAGGCCAAATAGCTAC...AGCTGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS TCA 90 bp CTCTGGTCTCCTTCAGAGACTCAGAAGTGTTGCGTTGGGAAGTGTTaGTTAGAAATGGATCCAGCTGTTTTTCTTGACAGGGAGCGAGCA +
Preference number: 5 (lower is better)
Translates to: LWSPSETQKCCVGKC*LEMDPAVFLDRERA
Trigger: TGCTCGCTCCCTGTCAAGAAAAACAGCTGGATCCATTTCTAATCAACACTTCCCAACGCAACACTTCTGAGTCTCTGAAGGAGACCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTAGAGACTCAGAAGTGTaGCGTTGGGAAGTGTTGATT +
Preference number: 5 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFRDSEV*RWEVLI
Trigger: AATCAACACTTCCCAACGCAACACTTCTGAGTCTCT...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAATGCACTCGATGTCTGTaGGAAGTCTGGAAAGTTTCA +
Preference number: 5 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKCTRCL*EVWKVS
Trigger: TGAAACTTTCCAGACTTCCAACAGACATCGAGTGCA...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTGCACTCGATGTCTGTaGGAAGTCTGGAAAGTTTCA +
Preference number: 5 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILCTRCL*EVWKVS
Trigger: TGAAACTTTCCAGACTTCCAACAGACATCGAGTGCA...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAACCTAGCATTCCTTTTTaGGAACTGGACAGACACATG +
Preference number: 5 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKPSIPF*ELDRHM
Trigger: CATGTGTCTGTCCAGTTCCAAAAAAGGAATGCTAGG...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTCAGGCTTCATCATGTTaGCCCATCTCTAGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFQASSC*PISSRN
Trigger: GTTTCTGCTAGAGATGGGCAAACATGATGAAGCCTG...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTATTTGCTTGGGAGTTTaGATGTTGGAAACCGTGAAC +
Preference number: 5 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKIICLGV*MLETVN
Trigger: GTTCACGGTTTCCAACATCAAAACTCCCAAGCAAAT...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTTCCAGGAAGGTGGAGTaGATAAACCGACAGTTGATG +
Preference number: 5 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFSRKVE*INRQLM
Trigger: CATCAACTGTCGGTTTATCAACTCCACCTTCCTGGA...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTCAGGAAGTCATTATCTaGCTCCAAGTCCATGTGGCA +
Preference number: 5 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRAQEVII*LQVHVA
Trigger: TGCCACATGGACTTGGAGCAAGATAATGACTTCCTG...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTCAGGAAGTCATTATCTaGCTCCAAGTCCATGTGGCA +
Preference number: 5 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPQEVII*LQVHVA
Trigger: TGCCACATGGACTTGGAGCAAGATAATGACTTCCTG...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTGAGCCACCAATCATCTaGAGCCTTCCAATTCTATCC +
Preference number: 5 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRAEPPII*SLPILS
Trigger: GGATAGAATTGGAAGGCTCAAGATGATTGGTGGCTC...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp ACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTGAGCCACCAATCATCTaGAGCCTTCCAATTCTATCC +
Preference number: 5 (lower is better)
Translates to: TVIGRKCGCISVSWTRFSEPPII*SLPILS
Trigger: GGATAGAATTGGAAGGCTCAAGATGATTGGTGGCTC...AGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTAGGATGGCGCCAAATTaGCATAATCCATTGAGAATG +
Preference number: 5 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKIRMAPN*HNPLRM
Trigger: CATTCTCAATGGATTATGCAAATTTGGCGCCATCCT...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCAGGATGGGGACCACTTaGGTTATCCCAACAAAAGAA +
Preference number: 5 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTRMGTT*VIPTKE
Trigger: TTCTTTTGTTGGGATAACCAAAGTGGTCCCCATCCT...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTAGGATGGGGACCACTTaGGTTATCCCAACAAAAGAA +
Preference number: 5 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFRMGTT*VIPTKE
Trigger: TTCTTTTGTTGGGATAACCAAAGTGGTCCCCATCCT...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGAAATCCTCTCCCTGCCTaGGACTGGGAAGACTTGAAG +
Preference number: 5 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRNPLPA*DWEDLK
Trigger: CTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATT...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTTCCAGCCAAGTTGATTaGTTAAGTTGTTGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFSSQVD*LSCWAP
Trigger: TGGAGCCCAACAACTTAACAAATCAACTTGGCTGGA...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGTCCAGCCAAGTTGATTaGTTAAGTTGTTGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: RDRQEVWMHFSVLDKILSSSQVD*LSCWAP
Trigger: TGGAGCCCAACAACTTAACAAATCAACTTGGCTGGA...CGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp TGTGATTCTAAGGGTGGCTCAGGGCACCCCCAAATCAGTCACCTGAGTTACAAACAAGACTTCAGTCTATaGCTGACCTTCATCAGAGAG +
Preference number: 5 (lower is better)
Translates to: CDSKGGSGHPQISHLSYKQDFSL*LTFIRE
Trigger: CTCTCTGATGAAGGTCAGCAATAGACTGAAGTCTTG...TTTGTAACTCAGGTGACTGATTTGGGGGTGCCCTGAGCCACCCTTAGAATCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp ACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTTCACTGTCCCCTCCATaGTCAGACAGTTCTGATGTT +
Preference number: 5 (lower is better)
Translates to: TVIGRKCGCISVSWTRFSSLSPP*SDSSDV
Trigger: AACATCAGAACTGTCTGACAATGGAGGGGACAGTGA...AGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTTTAGCCCCCAAATTATaGCAGCCACCCCAGCACTCC +
Preference number: 5 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVLAPKL*QPPQHS
Trigger: GGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAA...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACGAGTATTTGTCACATaGTCCCATTCCCCAAACTGC +
Preference number: 5 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRRVFVT*SHSPNC
Trigger: GCAGTTTGGGGAATGGGACAATGTGACAAATACTCG...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp ACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCATGAAAGGTGCAGTTaGCGGATTGTAAGGTCATCG +
Preference number: 5 (lower is better)
Translates to: TVIGRKCGCISVSWTRFSHERCS*RIVRSS
Trigger: CGATGACCTTACAATCCGCAAACTGCACCTTTCATG...AGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GGAGAATCCTCTCCCTGCCTTGGACTGGGAAGACTTGAAGTTAAACACGCAGCTTCATCATTCATCTTTTaGGAAATCTCGCTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GESSPCLGLGRLEVKHAASSFIF*EISLLP
Trigger: TGGCAGCAGCGAGATTTCCAAAAAGATGAATGATGA...AGCTGCGTGTTTAACTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATGATATTCCTCCTTCCTaGAAACCTGAAATTCATGGA +
Preference number: 5 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYDIPPS*KPEIHG
Trigger: TCCATGAATTTCAGGTTTCAAGGAAGGAGGAATATC...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GTGGATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATCTTAATTATCTCAGGTaGAAGGTGCGTTACAGAAAG +
Preference number: 5 (lower is better)
Translates to: VDGQNAVHCPPVTCHRDYLNYLR*KVRYRK
Trigger: CTTTCTGTAACGCACCTTCAACCTGAGATAATTAAG...ATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGGCGTGCTGGCCTGATTaGTCCTGCCACCGAAGGTTA +
Preference number: 5 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWACWPD*SCHRRL
Trigger: TAACCTTCGGTGGCAGGACAAATCAGGCCAGCACGC...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTAGGATGGGGACCACTTaGGTTATCCCAACAAAAGAA +
Preference number: 5 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFRMGTT*VIPTKE
Trigger: TTCTTTTGTTGGGATAACCAAAGTGGTCCCCATCCT...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGATCCTTTTCCCATAGGTaGTTCACATCAGGACCTGTT +
Preference number: 5 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRSFSHR*FTSGPV
Trigger: AACAGGTCCTGATGTGAACAACCTATGGGAAAAGGA...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTTCCTTTTCCCATAGGTaGTTCACATCAGGACCTGTT +
Preference number: 5 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFSFSHR*FTSGPV
Trigger: AACAGGTCCTGATGTGAACAACCTATGGGAAAAGGA...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp TTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTCCAGCCAAGTTGATTaGTTAAGTTGTTGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: LRSSPVLRLDNPAKVCRASSQVD*LSCWAP
Trigger: TGGAGCCCAACAACTTAACAAATCAACTTGGCTGGA...AGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GATGGCCAGAATGCTGTACATTGTCCCCCAGTGACCTGCCACAGAGACTATTTTGTGCTTGCATTTCATTaGATCAGACCTCATTTCCTG +
Preference number: 5 (lower is better)
Translates to: DGQNAVHCPPVTCHRDYFVLAFH*IRPHFL
Trigger: CAGGAAATGAGGTCTGATCAAATGAAATGCAAGCAC...AAAATAGTCTCTGTGGCAGGTCACTGGGGGACAATGTACAGCATTCTGGCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGATGTGGCACTTGCCCATaGAGAGCACTGCAAATCAAC +
Preference number: 5 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRCGTCP*RALQIN
Trigger: GTTGATTTGCAGTGCTCTCAATGGGCAAGTGCCACA...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTGATGACACAATACAGTaGAGACTATGGAAAGCAACT +
Preference number: 5 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKIDDTIQ*RLWKAT
Trigger: AGTTGCTTTCCATAGTCTCAACTGTATTGTGTCATC...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGTAGTGTGGGTTGGGGTTTACTaGTTACATGACCTCAGGATG +
Preference number: 5 (lower is better)
Translates to: LQRVPEATEHISHCFWVVWVGVY*LHDLRM
Trigger: CATCCTGAGGTCATGTAACAAGTAAACCCCAACCCA...CACTACCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGAGAGCTTCTGGTTGGGTaGGTTTTAAGTTATCAGAGC +
Preference number: 5 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRELLVG*VLSYQS
Trigger: GCTCTGATAACTTAAAACCAACCCAACCAGAAGCTC...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTCATCATTCATCTTTTaGGAAATCTCGCTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTSSFIF*EISLLP
Trigger: TGGCAGCAGCGAGATTTCCAAAAAGATGAATGATGA...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGGATATTCCTCCTTCCTaGAAACCTGAAATTCATGGA +
Preference number: 5 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKDIPPS*KPEIHG
Trigger: TCCATGAATTTCAGGTTTCAAGGAAGGAGGAATATC...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp ACCGGCACCTGTCTAGGCCACCTCCCACTGGAGAGAATGAAACCTGTTAATCCTCTCCAAGATTTCTATTaGGCAAATTCACATAGCTAC +
Preference number: 5 (lower is better)
Translates to: TGTCLGHLPLERMKPVNPLQDFY*ANSHSY
Trigger: GTAGCTATGTGAATTTGCCAAATAGAAATCTTGGAG...AGGATTAACAGGTTTCATTCTCTCCAGTGGGAGGTGGCCTAGACAGGTGCCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS-3UTR CAA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAAGAGACTCAGAAGTGTaGCGTTGGGAAGTGTTGATT +
Preference number: 5 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRRDSEV*RWEVLI
Trigger: AATCAACACTTCCCAACGCAACACTTCTGAGTCTCT...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAACTGCCTGGTTGCCCCTaGAGCTATATCCCTCGCTCT +
Preference number: 5 (lower is better)
Translates to: LGVYGICFAVLLEECFNKLPGCP*SYIPRS
Trigger: AGAGCGAGGGATATAGCTCAAGGGGCAACCAGGCAG...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCCTGCCTGGTTGCCCCTaGAGCTATATCCCTCGCTCT +
Preference number: 5 (lower is better)
Translates to: LRLWKATISKLGIIKYIILPGCP*SYIPRS
Trigger: AGAGCGAGGGATATAGCTCAAGGGGCAACCAGGCAG...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGACCTAGCATTCCTTTTTaGGAACTGGACAGACACATG +
Preference number: 5 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRPSIPF*ELDRHM
Trigger: CATGTGTCTGTCCAGTTCCAAAAAAGGAATGCTAGG...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTAATTCATCCTCCCAACAGCAGGCTTCATCATGTTaGCCCATCTCTAGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: AWIKQTAQCEFVNSSSQQQASSC*PISSRN
Trigger: GTTTCTGCTAGAGATGGGCAAACATGATGAAGCCTG...CTGTTGGGAGGATGAATTAACAAACTCACATTGTGCAGTCTGCTTAATCCAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp ACTTCCCTGACAAGTCAAAGTACCACCTATTGGAAGAGTGTCAGTGCTACTCAACAGGCTTCATCATGTTaGCCCATCTCTAGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: TSLTSQSTTYWKSVSATQQASSC*PISSRN
Trigger: GTTTCTGCTAGAGATGGGCAAACATGATGAAGCCTG...TTGAGTAGCACTGACACTCTTCCAATAGGTGGTACTTTGACTTGTCAGGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTAATTCATCCTCCCAACAGGTGTCATGGACTTGCTaGAGAATCATCCAGGCTTCA +
Preference number: 5 (lower is better)
Translates to: AWIKQTAQCEFVNSSSQQVSWTC*RIIQAS
Trigger: TGAAGCCTGGATGATTCTCAAGCAAGTCCATGACAC...CTGTTGGGAGGATGAATTAACAAACTCACATTGTGCAGTCTGCTTAATCCAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTGGGAGTTTTGATGTaGGAAACCGTGAACACTTTC +
Preference number: 5 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPLGVLM*ETVNTF
Trigger: GAAAGTGTTCACGGTTTCCAACATCAAAACTCCCAA...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTTTGGGAGTTTTGATGTaGGAAACCGTGAACACTTTC +
Preference number: 5 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFLGVLM*ETVNTF
Trigger: GAAAGTGTTCACGGTTTCCAACATCAAAACTCCCAA...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CTTGCCTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGATTTGCTTGGGAGTTTaGATGTTGGAAACCGTGAAC +
Preference number: 5 (lower is better)
Translates to: LACKEYQRPLNTSHIVFGICLGV*MLETVN
Trigger: GTTCACGGTTTCCAACATCAAAACTCCCAAGCAAAT...CCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTATTTGCTTGGGAGTTTaGATGTTGGAAACCGTGAAC +
Preference number: 5 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFICLGV*MLETVN
Trigger: GTTCACGGTTTCCAACATCAAAACTCCCAAGCAAAT...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GTGGGTCCTAAACTAGGGGTCACAAAGTCAACTTCTCCTCCCGTGCTATCCAAGAATTCATCCATTTGCTaGGGAGTTTTGATGTTGGAA +
Preference number: 5 (lower is better)
Translates to: VGPKLGVTKSTSPPVLSKNSSIC*GVLMLE
Trigger: TTCCAACATCAAAACTCCCAAGCAAATGGATGAATT...CTTGGATAGCACGGGAGGAGAAGTTGACTTTGTGACCCCTAGTTTAGGACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CCGGACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTAATTCATCCATTTGCTaGGGAGTTTTGATGTTGGAA +
Preference number: 5 (lower is better)
Translates to: PDRDRQEVWMHFSVLDKINSSIC*GVLMLE
Trigger: TTCCAACATCAAAACTCCCAAGCAAATGGATGAATT...AATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGAATTCATCCATTTGCTaGGGAGTTTTGATGTTGGAA +
Preference number: 5 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWNSSIC*GVLMLE
Trigger: TTCCAACATCAAAACTCCCAAGCAAATGGATGAATT...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGTCCAGGCTGCAATGCTaGTCCCACAGAACAGGCACT +
Preference number: 5 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWSRLQC*SHRTGT
Trigger: AGTGCCTGTTCTGTGGGACAAGCATTGCAGCCTGGA...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCAATTTGCATAATCCATaGAGAATGCCGAAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTNLHNP*RMPKAV
Trigger: AACAGCCTTCGGCATTCTCAATGGATTATGCAAATT...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGAAGGATGGCGCCAAATTaGCATAATCCATTGAGAATG +
Preference number: 5 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRRMAPN*HNPLRM
Trigger: CATTCTCAATGGATTATGCAAATTTGGCGCCATCCT...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp ACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTAGGATGGCGCCAAATTaGCATAATCCATTGAGAATG +
Preference number: 5 (lower is better)
Translates to: TVIGRKCGCISVSWTRFSRMAPN*HNPLRM
Trigger: CATTCTCAATGGATTATGCAAATTTGGCGCCATCCT...AGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCAAATGCTGGCAATATTaGCAGATACCAGTTGTGGAA +
Preference number: 5 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILKCWQY*QIPVVE
Trigger: TTCCACAACTGGTATCTGCAAATATTGCCAGCATTT...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCAAATGCTGGCAATATTaGCAGATACCAGTTGTGGAA +
Preference number: 5 (lower is better)
Translates to: DRQEVWMHFSVLDKILSTKCWQY*QIPVVE
Trigger: TTCCACAACTGGTATCTGCAAATATTGCCAGCATTT...GGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp AGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTGGATGCCACAAGCATATTaGTCTATGAAAATCTTCACC +
Preference number: 5 (lower is better)
Translates to: RSSPVLRLDNPAKVCRAWMPQAY*SMKIFT
Trigger: GGTGAAGATTTTCATAGACAAATATGCTTGTGGCAT...CCAAGCTCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTTCTATGGGATTTGCTTaGCCGTTCTTTTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFSMGFA*PFFWRN
Trigger: ATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGA...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCCCTGGGAGGTGGAGATaGCAGCAAGCCAAGATTGCA +
Preference number: 5 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLAPGRWR*QQAKIA
Trigger: TGCAATCTTGGCTTGCTGCAATCTCCACCTCCCAGG...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGATTGGGAGTTTTGATGTaGGAAACCGTGAACACTTTC +
Preference number: 5 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRLGVLM*ETVNTF
Trigger: GAAAGTGTTCACGGTTTCCAACATCAAAACTCCCAA...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGAATCCTCTCCCTGCCTaGGACTGGGAAGACTTGAAG +
Preference number: 5 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWNPLPA*DWEDLK
Trigger: CTTCAAGTCTTCCCAGTCCAAGGCAGGGAGAGGATT...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGGGGAAAATGTGGCACTaGCCCATTGAGAGCACTGCA +
Preference number: 5 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWGKMWH*PIESTA
Trigger: TGCAGTGCTCTCAATGGGCAAGTGCCACATTTTCCC...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTCGAGTATTTGTCACATaGTCCCATTCCCCAAACTGC +
Preference number: 5 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVRVFVT*SHSPNC
Trigger: GCAGTTTGGGGAATGGGACAATGTGACAAATACTCG...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GACCGTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCCGTTACCTCACTTACTaGTCATTTTTGCATTTTTGG +
Preference number: 5 (lower is better)
Translates to: DRDRQEVWMHFSVLDKILRYLTY*SFLHFW
Trigger: CCAAAAATGCAAAAATGACAAGTAAGTGAGGTAACG...GAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCACGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAATTCATGACTCACAGCTaGTGGCCGTGTCCTCCGCTT +
Preference number: 5 (lower is better)
Translates to: LGVYGICFAVLLEECFNKFMTHS*WPCPPL
Trigger: AAGCGGAGGACACGGCCACAAGCTGTGAGTCATGAA...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGAGACCAAAAGTGGGTTTaGTCAGTTCACATTTATAGC +
Preference number: 5 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRDQKWV*SVHIYS
Trigger: GCTATAAATGTGAACTGACAAAACCCACTTTTGGTC...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS-3UTR CAA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATAACCTAAATATCCTTTaGCACTCGATGTCTGTTGGA +
Preference number: 5 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNNLNIL*HSMSVG
Trigger: TCCAACAGACATCGAGTGCAAAAGGATATTTAGGTT...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGCCCTTAGCTCTCATGTaGGTGTCATGGACTTGCTTG +
Preference number: 5 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWPLALM*VSWTCL
Trigger: CAAGCAAGTCCATGACACCAACATGAGAGCTAAGGG...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp AGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTAATTCATCCATTTGCTaGGGAGTTTTGATGTTGGAA +
Preference number: 5 (lower is better)
Translates to: RQEVWMHFSVLDKILSTFNSSIC*GVLMLE
Trigger: TTCCAACATCAAAACTCCCAAGCAAATGGATGAATT...AAAGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAAATTTGCATAATCCATaGAGAATGCCGAAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRNLHNP*RMPKAV
Trigger: AACAGCCTTCGGCATTCTCAATGGATTATGCAAATT...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATAATTTGCATAATCCATaGAGAATGCCGAAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNNLHNP*RMPKAV
Trigger: AACAGCCTTCGGCATTCTCAATGGATTATGCAAATT...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp GTGATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACATCTCACATTGTTTTaGGGTAGTGGCAAAGTAAAA +
Preference number: 5 (lower is better)
Translates to: VIGRKCGCISVSWTRFSRHLTLF*GSGKVK
Trigger: TTTTACTTTGCCACTACCCAAAAACAATGTGAGATG...TCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGTAGTGGATGACACAATACAGTaGAGACTATGGAAAGCAACT +
Preference number: 5 (lower is better)
Translates to: LQRVPEATEHISHCFWVVDDTIQ*RLWKAT
Trigger: AGTTGCTTTCCATAGTCTCAACTGTATTGTGTCATC...CACTACCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATGATGACACAATACAGTaGAGACTATGGAAAGCAACT +
Preference number: 5 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNDDTIQ*RLWKAT
Trigger: AGTTGCTTTCCATAGTCTCAACTGTATTGTGTCATC...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CTTGCCTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGTTTTCATTGACATTTTaGGGTTACTGTTGCACTACC +
Preference number: 5 (lower is better)
Translates to: LACKEYQRPLNTSHIVFGFSLTF*GYCCTT
Trigger: GGTAGTGCAACAGTAACCCAAAAATGTCAATGAAAA...CCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAGGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTGCTTCTGAAAGACCTTaGCTTTCTAAAGGAATACAT +
Preference number: 5 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPASERP*LSKGIH
Trigger: ATGTATTCCTTTAGAAAGCAAAGGTCTTTCAGAAGC...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CTGCAAAGAGTACCAGAGGCCACTGAACACATCTCACATTGTTTTTGGGTAGTGGTCACTTTTAGTATTTaGGGTGTCTATGGGATTTGC +
Preference number: 5 (lower is better)
Translates to: LQRVPEATEHISHCFWVVVTFSI*GVYGIC
Trigger: GCAAATCCCATAGACACCCAAAATACTAAAAGTGAC...CACTACCCAAAAACAATGTGAGATGTGTTCAGTGGCCTCTGGTACTCTTTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGTCACTTTTAGTATTTaGGGTGTCTATGGGATTTGC +
Preference number: 5 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRVTFSI*GVYGIC
Trigger: GCAAATCCCATAGACACCCAAAATACTAAAAGTGAC...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp ATAGGCAGGAAGTGTGGATGCATTTCAGTGTCCTGGACAAGATTCTCTCGACCTTTTAATTTTAAGAAGTaGGGACCAGGCATAGTAGCT +
Preference number: 5 (lower is better)
Translates to: IGRKCGCISVSWTRFSRPFNFKK*GPGIVA
Trigger: AGCTACTATGCCTGGTCCCAACTTCTTAAAATTAAA...AGGTCGAGAGAATCTTGTCCAGGACACTGAAATGCATCCACACTTCCTGCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS TCA 90 bp ATTCTTGTGAACTTATCATTCACAAGTTTCCCATGTTGGTGGATCTaGTTTTCCATCGTGAAGTTGATTGTGGCGCCGTACACATGCTCA +
Preference number: 5 (lower is better)
Translates to: ILVNLSFTSFPCWWI*FSIVKLIVAPYTCS
Trigger: TGAGCATGTGTACGGCGCCACAATCAACTTCACGATGGAAAATCAGATCCACCAACATGGGAAACTTGTGAATGATAAGTTCACAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS GCA 90 bp TACCAGGTTCCTGTTGAACTTTGGATCTCAATGAATTCATCCATTTaGTTGGGAGTTTTGATGTTGGAAACCGTGAACACTTTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: YQVPVELWISMNSSI*LGVLMLETVNTFSG
Trigger: CCCAGAGAAAGTGTTCACGGTTTCCAACATCAAAACTCCCAAGCAAATGGATGAATTCATTGAGATCCAAAGTTCAACAGGAACCTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000553727.1
ENST00000557410.5
CDS CCA 90 bp TTTGTGCAAAGACAACCTAAATATCCTTTTGCACTCGATGTCTGTTaGAAGTCTGGAAAGTTTCAAGCTCTGGTCTCCTTCAGAGACTCA +
Preference number: 5 (lower is better)
Translates to: FVQRQPKYPFALDVC*KSGKFQALVSFRDS
Trigger: TGAGTCTCTGAAGGAGACCAGAGCTTGAAACTTTCCAGACTTCCAACAGACATCGAGTGCAAAAGGATATTTAGGTTGTCTTTGCACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp AAGCCCAATCTTCATATAATGACTCTAACTTCCAGCCAAGTTGATTTGTTAAGTATCCAGCTGTTTTTCTaGACAGGGAGCGAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: KPNLHIMTLTSSQVDLLSIQLFF*TGSEQD
Trigger: GTCCTGCTCGCTCCCTGTCAAGAAAAACAGCTGGAT...ACTTAACAAATCAACTTGGCTGGAAGTTAGAGTCATTATATGAAGATTGGGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGAAACCTAAATATCCTTTaGCACTCGATGTCTGTTGGA +
Preference number: 5 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRNLNIL*HSMSVG
Trigger: TCCAACAGACATCGAGTGCAAAAGGATATTTAGGTT...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp ACAATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGCTTGAAAATGGTCTaGAATCTGACCAGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: TMNYRMPQAYLSMKIFTRCLKMV*NLTSQR
Trigger: GCGCTGGCTGGTCAGATTCAAGACCATTTTCAAGCA...CCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGATCCCATTCCGTTTCTTaGAATAGAGCAAAACAGAAA +
Preference number: 5 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRSHSVS*NRAKQK
Trigger: TTTCTGTTTTGCTCTATTCAAAGAAACGGAATGGGA...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTGTGCTTGCATTTCATTaGATCAGACCTCATTTCCTG +
Preference number: 5 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVVLAFH*IRPHFL
Trigger: CAGGAAATGAGGTCTGATCAAATGAAATGCAAGCAC...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp ACCTGCACAAAGAAAAGTGCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTCAGTGGTATATATATTaGGAGGAATCAGGGTGTCCA +
Preference number: 5 (lower is better)
Translates to: TCTKKSAWIKQTAQCEFVQWYIY*EESGCP
Trigger: TGGACACCCTGATTCCTCCAAATATATATACCACTG...AACAAACTCACATTGTGCAGTCTGCTTAATCCAGGCACTTTTCTTTGTGCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATATGCCACAAGCATATTaGTCTATGAAAATCTTCACC +
Preference number: 5 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNMPQAY*SMKIFT
Trigger: GGTGAAGATTTTCATAGACAAATATGCTTGTGGCAT...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CATTTAAGAAGTAGCCCGGTACTCAGGCTAGACAATCCTGCAAAAGTCTGCAGAGCTTCTGAAAGACCTTaGCTTTCTAAAGGAATACAT +
Preference number: 5 (lower is better)
Translates to: HLRSSPVLRLDNPAKVCRASERP*LSKGIH
Trigger: ATGTATTCCTTTAGAAAGCAAAGGTCTTTCAGAAGC...TCTGCAGACTTTTGCAGGATTGTCTAGCCTGAGTACCGGGCTACTTCTTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp CAAATGGAGTTAGCCCCCAAATTATTGCAGCCACCCCAGCACTCCAATGTTAATTTTAATTTTAAGAAGTaGGGACCAGGCATAGTAGCT +
Preference number: 5 (lower is better)
Translates to: QMELAPKLLQPPQHSNVNFNFKK*GPGIVA
Trigger: AGCTACTATGCCTGGTCCCAACTTCTTAAAATTAAA...ATTAACATTGGAGTGCTGGGGTGGCTGCAATAATTTGGGGGCTAACTCCATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACAACCTAAATATCCTTTaGCACTCGATGTCTGTTGGA +
Preference number: 5 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHNLNIL*HSMSVG
Trigger: TCCAACAGACATCGAGTGCAAAAGGATATTTAGGTT...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp ACAATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTCCAGGAAGGTGGAGTaGATAAACCGACAGTTGATG +
Preference number: 5 (lower is better)
Translates to: TMNYRMPQAYLSMKIFTRSRKVE*INRQLM
Trigger: CATCAACTGTCGGTTTATCAACTCCACCTTCCTGGA...CCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCCAGGAAGTCATTATCTaGCTCCAAGTCCATGTGGCA +
Preference number: 5 (lower is better)
Translates to: LRLWKATISKLGIIKYIIQEVII*LQVHVA
Trigger: TGCCACATGGACTTGGAGCAAGATAATGACTTCCTG...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp CAGCTCACCTCTGAAAAGGTAGAAGAGGTATCCCATCTAGCCAAAGGATTAAGATCCCATTCCGTTTCTTaGAATAGAGCAAAACAGAAA +
Preference number: 5 (lower is better)
Translates to: QLTSEKVEEVSHLAKGLRSHSVS*NRAKQK
Trigger: TTTCTGTTTTGCTCTATTCAAAGAAACGGAATGGGA...TCTTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCAGAGGTGAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp AAGCCCAATCTTCATATAATGACTCTAACTTCCAGCCAAGTTGATTTGTTAAGTCCCTCAGTCCCCATGTaGTTTGATTCTTGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: KPNLHIMTLTSSQVDLLSPSVPM*FDSCLQ
Trigger: TTGCAGGCAAGAATCAAACAACATGGGGACTGAGGG...ACTTAACAAATCAACTTGGCTGGAAGTTAGAGTCATTATATGAAGATTGGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAATCACTGTCCCCTCCATaGTCAGACAGTTCTGATGTT +
Preference number: 5 (lower is better)
Translates to: LGVYGICFAVLLEECFNKSLSPP*SDSSDV
Trigger: AACATCAGAACTGTCTGACAATGGAGGGGACAGTGA...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp GCCTGGATTAAGCAGACTGCACAATGTGAGTTTGTTAATTCATCCTCCCAACAGAGCCCAAAGATTAATTaGAACTTTCCAAGTTTTGGC +
Preference number: 5 (lower is better)
Translates to: AWIKQTAQCEFVNSSSQQSPKIN*NFPSFG
Trigger: GCCAAAACTTGGAAAGTTCAAATTAATCTTTGGGCT...CTGTTGGGAGGATGAATTAACAAACTCACATTGTGCAGTCTGCTTAATCCAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACGACTCTGAAAACAGGTaGAGCATTCCAAATCCAAAT +
Preference number: 5 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHDSENR*SIPNPN
Trigger: ATTTGGATTTGGAATGCTCAACCTGTTTTCAGAGTC...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS-3UTR CAA 90 bp AATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCACTGTATTCATATGGAGGATGGCGCCAAATTaGCATAATCCATTGAGAATG +
Preference number: 5 (lower is better)
Translates to: NPRLTQFSFMNLATVFIWRMAPN*HNPLRM
Trigger: CATTCTCAATGGATTATGCAAATTTGGCGCCATCCT...CCATATGAATACAGTGGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCCTGCACAATGTGAGTTaGTTAATTCATCCTCCCAAC +
Preference number: 5 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLALHNVS*LIHPPN
Trigger: GTTGGGAGGATGAATTAACAAACTCACATTGTGCAG...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp AAGCCCAATCTTCATATAATGACTCTAACTTCCAGCCAAGTTGATTTGTTAAGTTGGGTTGGGGTTTACTaGTTACATGACCTCAGGATG +
Preference number: 5 (lower is better)
Translates to: KPNLHIMTLTSSQVDLLSWVGVY*LHDLRM
Trigger: CATCCTGAGGTCATGTAACAAGTAAACCCCAACCCA...ACTTAACAAATCAACTTGGCTGGAAGTTAGAGTCATTATATGAAGATTGGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp AGGATTAAGATAGTCACTTTTGTAGCAGTTGCTGTGGGAATGATTCGAGACCACTTGGTTTCTTTGAATTaGCAGTCATATGCCATCCAA +
Preference number: 5 (lower is better)
Translates to: RIKIVTFVAVAVGMIRDHLVSLN*QSYAIQ
Trigger: TTGGATGGCATATGACTGCAAATTCAAAGAAACCAA...GTGGTCTCGAATCATTCCCACAGCAACTGCTACAAAAGTGACTATCTTAATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp TTGGGTGTCTATGGGATTTGCTTTGCCGTTCTTTTGGAGGAATGTTTTAATAAAGAGCTTCTGGTTGGGTaGGTTTTAAGTTATCAGAGC +
Preference number: 5 (lower is better)
Translates to: LGVYGICFAVLLEECFNKELLVG*VLSYQS
Trigger: GCTCTGATAACTTAAAACCAACCCAACCAGAAGCTC...TTTATTAAAACATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGACACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp ACAATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGCTGCACAATGTGAGTTaGTTAATTCATCCTCCCAAC +
Preference number: 5 (lower is better)
Translates to: TMNYRMPQAYLSMKIFTRLHNVS*LIHPPN
Trigger: GTTGGGAGGATGAATTAACAAACTCACATTGTGCAG...CCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCCAGTGGTATATATATTaGGAGGAATCAGGGTGTCCA +
Preference number: 5 (lower is better)
Translates to: LRLWKATISKLGIIKYIIQWYIY*EESGCP
Trigger: TGGACACCCTGATTCCTCCAAATATATATACCACTG...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp TTGAGACTATGGAAAGCAACTATTTCCAAGCTGGGCATCATAAAATACATCATCAATTTGCATAATCCATaGAGAATGCCGAAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: LRLWKATISKLGIIKYIINLHNP*RMPKAV
Trigger: AACAGCCTTCGGCATTCTCAATGGATTATGCAAATT...GATGATGTATTTTATGATGCCCAGCTTGGAAATAGTTGCTTTCCATAGTCTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS-3UTR CAA 90 bp ATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGTGGCATCTCACATTGTTTTaGGGTAGTGGCAAAGTAAAA +
Preference number: 5 (lower is better)
Translates to: MNYRMPQAYLSMKIFTRWHLTLF*GSGKVK
Trigger: TTTTACTTTGCCACTACCCAAAAACAATGTGAGATG...CCACCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCTTGGTTTCTTTGAATTaGCAGTCATATGCCATCCAA +
Preference number: 5 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLALVSLN*QSYAIQ
Trigger: TTGGATGGCATATGACTGCAAATTCAAAGAAACCAA...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp TGTTTTAGATGTGGTAATCCCAGACTCACACAATTCTCTTTTATGAACCTAGCCTTTTCATTGACATTTTaGGGTTACTGTTGCACTACC +
Preference number: 5 (lower is better)
Translates to: CFRCGNPRLTQFSFMNLAFSLTF*GYCCTT
Trigger: GGTAGTGCAACAGTAACCCAAAAATGTCAATGAAAA...GGCTAGGTTCATAAAAGAGAATTGTGTGAGTCTGGGATTACCACATCTAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp AAGCCCAATCTTCATATAATGACTCTAACTTCCAGCCAAGTTGATTTGTTAAGTTCTATGGGATTTGCTTaGCCGTTCTTTTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: KPNLHIMTLTSSQVDLLSSMGFA*PFFWRN
Trigger: ATTCCTCCAAAAGAACGGCAAAGCAAATCCCATAGA...ACTTAACAAATCAACTTGGCTGGAAGTTAGAGTCATTATATGAAGATTGGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS-3UTR CAA 90 bp ACAATGAATTACAGGATGCCACAAGCATATTTGTCTATGAAAATCTTCACCAGGAGCCCAAAGATTAATTaGAACTTTCCAAGTTTTGGC +
Preference number: 5 (lower is better)
Translates to: TMNYRMPQAYLSMKIFTRSPKIN*NFPSFG
Trigger: GCCAAAACTTGGAAAGTTCAAATTAATCTTTGGGCT...CCTGGTGAAGATTTTCATAGACAAATATGCTTGTGGCATCCTGTAATTCATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330276.4
ENST00000394232.6
CDS CCA 72 bp CGGCAGCCCCGCGTGCAGCTCCGGCTAACGCGGAGCTaGGCGATCCGGGCGGAGGCAGGCGCCGGCGGGTGT +
Preference number: 6 (lower is better)
Translates to: RQPRVQLRLTRS*AIRAEAGAGGC
Trigger: ACACCCGCCGGCGCCTGCCTCCGCCCGGATCGCCCAGCTCCGCGTTAGCCGGAGCTGCACGCGGGGCTGCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545111.6
CDS CCA 72 bp CCCCCGCGCTACAGAGCACGCGGGGCGGGAGGCTCCTaGGTCCTCTACTCAGCGGGATCAGATCCTAACCCG +
Preference number: 6 (lower is better)
Translates to: PPRYRARGAGGS*VLYSAGSDPNP
Trigger: CGGGTTAGGATCTGATCCCGCTGAGTAGAGGACCCAGGAGCCTCCCGCCCCGCGTGCTCTGTAGCGCGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545111.6
CDS CCA 72 bp TGCCACCGAAGGTTATGCTCTGGGTGGCAAATCCGCTaGCGGCCGCCTCCGGATGCAGGCAGAGCAGCGTCC +
Preference number: 6 (lower is better)
Translates to: CHRRLCSGWQIR*RPPPDAGRAAS
Trigger: GGACGCTGCTCTGCCTGCATCCGGAGGCGGCCGCCAGCGGATTTGCCACCCAGAGCATAACCTTCGGTGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS TCA 72 bp GGGAGCGAGCAGGACTTGGCAGACTGCGTGCTGGCCTaGTTTGTCCTGCCACCGAAGGTTATGCTCTGGGTG +
Preference number: 6 (lower is better)
Translates to: GSEQDLADCVLA*FVLPPKVMLWV
Trigger: CACCCAGAGCATAACCTTCGGTGGCAGGACAAATCAGGCCAGCACGCAGTCTGCCAAGTCCTGCTCGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS CCA 72 bp TCCTCATCTTCCAGCCTCTCAGCCATCAGGTCTGTCTaGCCCCGAAGGCTGTCCATTCTGGAGGGCGCCATC +
Preference number: 6 (lower is better)
Translates to: SSSSSLSAIRSV*PRRLSILEGAI
Trigger: GATGGCGCCCTCCAGAATGGACAGCCTTCGGGGCCAGACAGACCTGATGGCTGAGAGGCTGGAAGATGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS CAA 72 bp CCCTGCACGAAGGAAGAGAGGGAGGCGAAGGAGGCATaGACGGCCAGAGACATGCTGAGGACTCGCTTCCTT +
Preference number: 6 (lower is better)
Translates to: PCTKEEREAKEA*TARDMLRTRFL
Trigger: AAGGAAGCGAGTCCTCAGCATGTCTCTGGCCGTCAATGCCTCCTTCGCCTCCCTCTCTTCCTTCGTGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS CAA 72 bp GCGAGCAGGACTTGGCAGACTGCGTGCTGGCCTGATTaGTCCTGCCACCGAAGGTTATGCTCTGGGTGGCAA +
Preference number: 6 (lower is better)
Translates to: ASRTWQTACWPD*SCHRRLCSGWQ
Trigger: TTGCCACCCAGAGCATAACCTTCGGTGGCAGGACAAATCAGGCCAGCACGCAGTCTGCCAAGTCCTGCTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS CAA 90 bp GCTCCATATCCCTGCACGAAGGAAGAGAGGGAGGCGAAGGAGGCATaGACGGCCAGAGACATGCTGAGGACTCGCTTCCTTCCCAGCTTA +
Preference number: 6 (lower is better)
Translates to: APYPCTKEEREAKEA*TARDMLRTRFLPSL
Trigger: TAAGCTGGGAAGGAAGCGAGTCCTCAGCATGTCTCTGGCCGTCAATGCCTCCTTCGCCTCCCTCTCTTCCTTCGTGCAGGGATATGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS TCA 72 bp TGCCCATCTCTAGCAGAAACCTTGGGCTCTCTGGCATaGACTTCAGGGCCACCATGGACACGGTGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: CPSLAETLGSLA*TSGPPWTRCRA
Trigger: TGCCCTGCACCGTGTCCATGGTGGCCCTGAAGTTCATGCCAGAGAGCCCAAGGTTTCTGCTAGAGATGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000553727.1
ENST00000557410.5
CDS TCA 72 bp GGGAGCGAGCAGGACTTGGCAGACTGCGTGCTGGCCTaGTTTGTCCTGCCACCGAAGGTTATGCTCTGTCTA +
Preference number: 6 (lower is better)
Translates to: GSEQDLADCVLA*FVLPPKVMLCL
Trigger: TAGACAGAGCATAACCTTCGGTGGCAGGACAAATCAGGCCAGCACGCAGTCTGCCAAGTCCTGCTCGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557410.5
CDS GCA 72 bp AGGACTTGGCAGACTGCGTGCTGGCCTGATTTGTCCTaGCACCGAAGGTTATGCTCTGGGTGGCAAATCCGC +
Preference number: 6 (lower is better)
Translates to: RTWQTACWPDLS*HRRLCSGWQIR
Trigger: GCGGATTTGCCACCCAGAGCATAACCTTCGGTGGCAGGACAAATCAGGCCAGCACGCAGTCTGCCAAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394232.6
CDS CCA 72 bp CCAGGGTTGCTTCCTCTCCATCACGCTGGCCCAGGTTaGTGGGGATGTTCAGGAGCTGCATTTTTCATCCAC +
Preference number: 6 (lower is better)
Translates to: PGLLPLHHAGPG*WGCSGAAFFIH
Trigger: GTGGATGAAAAATGCAGCTCCTGAACATCCCCACCAACCTGGGCCAGCGTGATGGAGAGGAAGCAACCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553727.1
CDS TCA 72 bp CAATCGGTAGAGCACCCCCAATACCGATGCCTGAGATaGGTCGGCAGAAGAGGAAGGCTCCATATCCCTGCA +
Preference number: 6 (lower is better)
Translates to: QSVEHPQYRCLR*VGRRGRLHIPA
Trigger: TGCAGGGATATGGAGCCTTCCTCTTCTGCCGACTCATCTCAGGCATCGGTATTGGGGGTGCTCTACCGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS GCA 72 bp CACTCATCCATGATGGTCTCGTACTGGTGGGCCAACTaGTCCTCATCTTCCAGCCTCTCAGCCATCAGGTCT +
Preference number: 6 (lower is better)
Translates to: HSSMMVSYWWAN*SSSSSLSAIRS
Trigger: AGACCTGATGGCTGAGAGGCTGGAAGATGAGGAGCAGTTGGCCCACCAGTACGAGACCATCATGGATGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS CCA 72 bp ATAGGTTGTTCACATCAGGACCTGTTCTCGAGTCTCTaGCAGTCGAAGGGCAATCAGGCCACCCCCAACCAG +
Preference number: 6 (lower is better)
Translates to: IGCSHQDLFSSL*QSKGNQATPNQ
Trigger: CTGGTTGGGGGTGGCCTGATTGCCCTTCGACTGCCAGAGACTCGAGAACAGGTCCTGATGTGAACAACCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS CAA 90 bp CAGGCTGCCCAGGAAGCTGACGAGGTAAATCAGGAAGTCATTATCTaGCTCCAAGTCCATGTGGCAGCCCTCCTTCTGCTCCAGGAAGGT +
Preference number: 6 (lower is better)
Translates to: QAAQEADEVNQEVII*LQVHVAALLLLQEG
Trigger: ACCTTCCTGGAGCAGAAGGAGGGCTGCCACATGGACTTGGAGCAAGATAATGACTTCCTGATTTACCTCGTCAGCTTCCTGGGCAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS GCA 72 bp GTAGTCATCCATTCCTTGGTTCTGCGACTGCCTGGTTaGCCCTTGAGCTATATCCCTCGCTCTGTGGTAGAG +
Preference number: 6 (lower is better)
Translates to: VVIHSLVLRLPG*PLSYIPRSVVE
Trigger: CTCTACCACAGAGCGAGGGATATAGCTCAAGGGGCAACCAGGCAGTCGCAGAACCAAGGAATGGATGACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS GCA 72 bp CATCACTCTGTGCATCTTCTTCTGGGTTGGACTCATTaGCGCGGTAATAGCCATCACTGGGAGCATAGCCCC +
Preference number: 6 (lower is better)
Translates to: HHSVHLLLGWTH*RGNSHHWEHSP
Trigger: GGGGCTATGCTCCCAGTGATGGCTATTACCGCGGCAATGAGTCCAACCCAGAAGAAGATGCACAGAGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS CCA 72 bp CCTGCCACCGAAGGTTATGCTCTGTCTAGATTCCTCTaGTCATCTCTGGGCAGCATTCCTTCCTTCTGGGTG +
Preference number: 6 (lower is better)
Translates to: PATEGYALSRFL*SSLGSIPSFWV
Trigger: CACCCAGAAGGAAGGAATGCTGCCCAGAGATGACCAGAGGAATCTAGACAGAGCATAACCTTCGGTGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557410.5
CDS CAA 72 bp ATCCATTCCTTGGTTCTGCGACTGCCTGGTTGCCCCTaGAGCTATATCCCTCGCTCTGTGGTAGAGGTTTGG +
Preference number: 6 (lower is better)
Translates to: IHSLVLRLPGCP*SYIPRSVVEVW
Trigger: CCAAACCTCTACCACAGAGCGAGGGATATAGCTCAAGGGGCAACCAGGCAGTCGCAGAACCAAGGAATGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS CAA 90 bp CCTGATACTTGTAGTCATCCATTCCTTGGTTCTGCGACTGCCTGGTaGCCCCTTGAGCTATATCCCTCGCTCTGTGGTAGAGGTTTGGGC +
Preference number: 6 (lower is better)
Translates to: PDTCSHPFLGSATAW*PLELYPSLCGRGLG
Trigger: GCCCAAACCTCTACCACAGAGCGAGGGATATAGCTCAAGGGGCAACCAGGCAGTCGCAGAACCAAGGAATGGATGACTACAAGTATCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS TCA 72 bp CTGTTGCTCTCTGGTTGGTGGGATACAGCTCCACTGTaGTCACATCCAGAGCATTCCAGGCTGCAATGCTTG +
Preference number: 6 (lower is better)
Translates to: LLLSGWWDTAPL*SHPEHSRLQCL
Trigger: CAAGCATTGCAGCCTGGAATGCTCTGGATGTGATCACAGTGGAGCTGTATCCCACCAACCAGAGAGCAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS GCA 72 bp GTCTTCCTCATCATGGCCTTCGGTGACATCACTCTGTaGATCTTCTTCTGGGTTGGACTCATTGCCGCGGTA +
Preference number: 6 (lower is better)
Translates to: VFLIMAFGDITL*IFFWVGLIAAV
Trigger: TACCGCGGCAATGAGTCCAACCCAGAAGAAGATGCACAGAGTGATGTCACCGAAGGCCATGATGAGGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS CCA 72 bp ACTTGTAGTCATCCATTCCTTGGTTCTGCGACTGCCTaGTTGCCCCTTGAGCTATATCCCTCGCTCTGTGGT +
Preference number: 6 (lower is better)
Translates to: TCSHPFLGSATA*LPLELYPSLCG
Trigger: ACCACAGAGCGAGGGATATAGCTCAAGGGGCAACCAGGCAGTCGCAGAACCAAGGAATGGATGACTACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS CCA 72 bp TTTTGGAACTGGACAGACACATGTCCTTCTCTGCACTaGGCAGGGCAAAACTCACCACGAACACTTCCACCC +
Preference number: 6 (lower is better)
Translates to: FWNWTDTCPSLH*AGQNSPRTLPP
Trigger: GGGTGGAAGTGTTCGTGGTGAGTTTTGCCCTGCCCAGTGCAGAGAAGGACATGTGTCTGTCCAGTTCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS CAA 72 bp TGTAGTCATCCATTCCTTGGTTCTGCGACTGCCTGGTaGCCCCTTGAGCTATATCCCTCGCTCTGTGGTAGA +
Preference number: 6 (lower is better)
Translates to: CSHPFLGSATAW*PLELYPSLCGR
Trigger: TCTACCACAGAGCGAGGGATATAGCTCAAGGGGCAACCAGGCAGTCGCAGAACCAAGGAATGGATGACTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS CAA 90 bp CTTGTAGTCATCCATTCCTTGGTTCTGCGACTGCCTGGTTGCCCCTaGAGCTATATCCCTCGCTCTGTGGTAGAGGTTTGGGCTATTTCA +
Preference number: 6 (lower is better)
Translates to: LVVIHSLVLRLPGCP*SYIPRSVVEVWAIS
Trigger: TGAAATAGCCCAAACCTCTACCACAGAGCGAGGGATATAGCTCAAGGGGCAACCAGGCAGTCGCAGAACCAAGGAATGGATGACTACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS CAA 90 bp AGCATAGCCCCCATAATTGTCCTGATACTTGTAGTCATCCATTCCTaGGTTCTGCGACTGCCTGGTTGCCCCTTGAGCTATATCCCTCGC +
Preference number: 6 (lower is better)
Translates to: SIAPIIVLILVVIHS*VLRLPGCPLSYIPR
Trigger: GCGAGGGATATAGCTCAAGGGGCAACCAGGCAGTCGCAGAACCAAGGAATGGATGACTACAAGTATCAGGACAATTATGGGGGCTATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS GCA 72 bp TTATCTTGCTCCAAGTCCATGTGGCAGCCCTCCTTCTaGTCCAGGAAGGTGGAGTTGATAAACCGACAGTTG +
Preference number: 6 (lower is better)
Translates to: LSCSKSMWQPSF*SRKVELINRQL
Trigger: CAACTGTCGGTTTATCAACTCCACCTTCCTGGAGCAGAAGGAGGGCTGCCACATGGACTTGGAGCAAGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS CAA 72 bp CAGGAAGCTGACGAGGTAAATCAGGAAGTCATTATCTaGCTCCAAGTCCATGTGGCAGCCCTCCTTCTGCTC +
Preference number: 6 (lower is better)
Translates to: QEADEVNQEVII*LQVHVAALLLL
Trigger: GAGCAGAAGGAGGGCTGCCACATGGACTTGGAGCAAGATAATGACTTCCTGATTTACCTCGTCAGCTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS TCA 72 bp GAAGTGTTGATTAGAAATGGATCCAGCTGTTTTTCTTaGCAGGGAGCGAGCAGGACTTGGCAGACTGCGTGC +
Preference number: 6 (lower is better)
Translates to: EVLIRNGSSCFS*QGASRTWQTAC
Trigger: GCACGCAGTCTGCCAAGTCCTGCTCGCTCCCTGTCAAGAAAAACAGCTGGATCCATTTCTAATCAACACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS CAA 72 bp CCCATAATTGTCCTGATACTTGTAGTCATCCATTCCTaGGTTCTGCGACTGCCTGGTTGCCCCTTGAGCTAT +
Preference number: 6 (lower is better)
Translates to: PIIVLILVVIHS*VLRLPGCPLSY
Trigger: ATAGCTCAAGGGGCAACCAGGCAGTCGCAGAACCAAGGAATGGATGACTACAAGTATCAGGACAATTATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS CCA 72 bp GCTCTGGTCTCCTTCAGAGACTCAGAAGTGTTGCGTTaGGAAGTGTTGATTAGAAATGGATCCAGCTGTTTT +
Preference number: 6 (lower is better)
Translates to: ALVSFRDSEVLR*EVLIRNGSSCF
Trigger: AAAACAGCTGGATCCATTTCTAATCAACACTTCCCAACGCAACACTTCTGAGTCTCTGAAGGAGACCAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS CAA 90 bp GCCTGGTTGCCCCTTGAGCTATATCCCTCGCTCTGTGGTAGAGGTTaGGGCTATTTCAATAACCATCATTCATTATGTAGTTCAAATGTG +
Preference number: 6 (lower is better)
Translates to: AWLPLELYPSLCGRG*GYFNNHHSLCSSNV
Trigger: CACATTTGAACTACATAATGAATGATGGTTATTGAAATAGCCCAAACCTCTACCACAGAGCGAGGGATATAGCTCAAGGGGCAACCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS CAA 90 bp TCTGGAAAGTTTCAAGCTCTGGTCTCCTTCAGAGACTCAGAAGTGTaGCGTTGGGAAGTGTTGATTAGAAATGGATCCAGCTGTTTTTCT +
Preference number: 6 (lower is better)
Translates to: SGKFQALVSFRDSEV*RWEVLIRNGSSCFS
Trigger: AGAAAAACAGCTGGATCCATTTCTAATCAACACTTCCCAACGCAACACTTCTGAGTCTCTGAAGGAGACCAGAGCTTGAAACTTTCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS CAA 90 bp CAGGTTCCTGTTGAACTTTGGATCTCAATGAATTCATCCATTTGCTaGGGAGTTTTGATGTTGGAAACCGTGAACACTTTCTCTGGGGTC +
Preference number: 6 (lower is better)
Translates to: QVPVELWISMNSSIC*GVLMLETVNTFSGV
Trigger: GACCCCAGAGAAAGTGTTCACGGTTTCCAACATCAAAACTCCCAAGCAAATGGATGAATTCATTGAGATCCAAAGTTCAACAGGAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000553727.1
ENST00000557410.5
CDS CAA 90 bp TCGTCACCCATCACAGCTTTGGTCCAGGAAGAAACATCCTTGAGATaGGATTTTCATCTCCCAGAAAAGACTGGTAGTAACAGCTTTAGT +
Preference number: 6 (lower is better)
Translates to: SSPITALVQEETSLR*DFHLPEKTGSNSFS
Trigger: ACTAAAGCTGTTACTACCAGTCTTTTCTGGGAGATGAAAATCCAATCTCAAGGATGTTTCTTCCTGGACCAAAGCTGTGATGGGTGACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557291.1
CDS TCA 72 bp AACTTATCATTCACAAGTTTCCCATGTTGGTGGATCTaGTTTTCCATCGTGAAGTTGATTGTGGCGCCGTAC +
Preference number: 6 (lower is better)
Translates to: NLSFTSFPCWWI*FSIVKLIVAPY
Trigger: GTACGGCGCCACAATCAACTTCACGATGGAAAATCAGATCCACCAACATGGGAAACTTGTGAATGATAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000557410.5
CDS CAA 72 bp TGGATCTCAATGAATTCATCCATTTGCTTGGGAGTTTaGATGTTGGAAACCGTGAACACTTTCTCTGGGGTC +
Preference number: 6 (lower is better)
Translates to: WISMNSSICLGV*MLETVNTFSGV
Trigger: GACCCCAGAGAAAGTGTTCACGGTTTCCAACATCAAAACTCCCAAGCAAATGGATGAATTCATTGAGATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000553727.1
ENST00000557410.5
CDS CAA 72 bp CTCAGAATTTTCCAGAGTCCCTGCCTTTGTGAAGTGTaGCTTCAAAACCTTCATAGTCCTGGAATTCAGGAA +
Preference number: 6 (lower is better)
Translates to: LRIFQSPCLCEV*LQNLHSPGIQE
Trigger: TTCCTGAATTCCAGGACTATGAAGGTTTTGAAGCAACACTTCACAAAGGCAGGGACTCTGGAAAATTCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557291.1
CDS CCA 72 bp CCCTTGAGCTATATCCCTCGCTCTGTGGTAGAGGTTTaGGCTATTTCAATAACCATCATTCATTATGTAGTT +
Preference number: 6 (lower is better)
Translates to: PLSYIPRSVVEV*AISITIIHYVV
Trigger: AACTACATAATGAATGATGGTTATTGAAATAGCCCAAACCTCTACCACAGAGCGAGGGATATAGCTCAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS CAA 72 bp CAACCAGATTTGTGCAAAGACAACCTAAATATCCTTTaGCACTCGATGTCTGTTGGAAGTCTGGAAAGTTTC +
Preference number: 6 (lower is better)
Translates to: QPDLCKDNLNIL*HSMSVGSLESF
Trigger: GAAACTTTCCAGACTTCCAACAGACATCGAGTGCAAAAGGATATTTAGGTTGTCTTTGCACAAATCTGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000557410.5
CDS CAA 72 bp GTTGAACTTTGGATCTCAATGAATTCATCCATTTGCTaGGGAGTTTTGATGTTGGAAACCGTGAACACTTTC +
Preference number: 6 (lower is better)
Translates to: VELWISMNSSIC*GVLMLETVNTF
Trigger: GAAAGTGTTCACGGTTTCCAACATCAAAACTCCCAAGCAAATGGATGAATTCATTGAGATCCAAAGTTCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330276.4
ENST00000394232.6
ENST00000545111.6
ENST00000553727.1
ENST00000557410.5
CDS CAA 72 bp TTTTCATTCTATCATTTTTCGTCACCCATCACAGCTTaGGTCCAGGAAGAAACATCCTTGAGATTGGATTTT +
Preference number: 6 (lower is better)
Translates to: FSFYHFSSPITA*VQEETSLRLDF
Trigger: AAAATCCAATCTCAAGGATGTTTCTTCCTGGACCAAAGCTGTGATGGGTGACGAAAAATGATAGAATGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557291.1