RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SUSD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000099994

Ensembl transcript IDs: ENST00000358321.4, ENST00000463101.1

Found 266 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGGGTCCCAGGATGGGCCCAGGGGTCCAGGAACCAAGGCAGCACTaGACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAG +
Preference number: 1 (lower is better)
Translates to: WGPRMGPGVQEPRQH*TGARTVREQASVDQ
Trigger: CTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGGTTCCTGGACCCCTGGGCCCATCCTGGGACCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR GCA 90 bp GCCCAGGTATCAAGTATCCAGGTCCCAGGTGTCTGGTCCTGGGGATaGGGGAGTCGCAGGACTGGGCTGCCTGTTCTCAGGAGTCTTGGC +
Preference number: 1 (lower is better)
Translates to: AQVSSIQVPGVWSWG*GSRRTGLPVLRSLG
Trigger: GCCAAGACTCCTGAGAACAGGCAGCCCAGTCCTGCGACTCCCGCATCCCCAGGACCAGACACCTGGGACCTGGATACTTGATACCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR CCA 90 bp AGGGGGTTAAATGCCCAGGTATCAAGTATCCAGGTCCCAGGTGTCTaGTCCTGGGGATGCGGGAGTCGCAGGACTGGGCTGCCTGTTCTC +
Preference number: 1 (lower is better)
Translates to: RGLNAQVSSIQVPGV*SWGCGSRRTGLPVL
Trigger: GAGAACAGGCAGCCCAGTCCTGCGACTCCCGCATCCCCAGGACCAGACACCTGGGACCTGGATACTTGATACCTGGGCATTTAACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR TCA 90 bp GGGCTTGGGTGTTGGAACACTGGGCCTCCTGCCTGGGGTCTGAGATaGCAGAGTAGGGGGTTAAATGCCCAGGTATCAAGTATCCAGGTC +
Preference number: 1 (lower is better)
Translates to: GLGCWNTGPPAWGLR*QSRGLNAQVSSIQV
Trigger: GACCTGGATACTTGATACCTGGGCATTTAACCCCCTACTCTGTCATCTCAGACCCCAGGCAGGAGGCCCAGTGTTCCAACACCCAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR GCA 90 bp TTCCTGAGTGACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTaGCGAGGGAGGCCTCTGCCGCTGGGGGTCTCGCTGTCTGCTTTG +
Preference number: 1 (lower is better)
Translates to: FLSDLPEEFEIISLE*RGRPLPLGVSLSAL
Trigger: CAAAGCAGACAGCGAGACCCCCAGCGGCAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTCACTCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR CCA 90 bp CAGGGTATGAAGTTTCAGGTTTGGGGAATTAGAGCCGTGAGTATTTaGGGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGG +
Preference number: 1 (lower is better)
Translates to: QGMKFQVWGIRAVSI*GRARSAASTGLGCW
Trigger: CCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCCCCAAATACTCACGGCTCTAATTCCCCAAACCTGAAACTTCATACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR-3UTR CCA 90 bp TGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGGTCAGGGGCCCCCCAGGTGTCTGGTCCTaGGGATGCGGGAGTCGCAGG +
Preference number: 2 (lower is better)
Translates to: WCPHGPGAGLRRSGVRGPPGVWS*GCGSRR
Trigger: CCTGCGACTCCCGCATCCCCAGGACCAGACACCTGG...GGGGCCCCTGACCCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCA
71% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR-3UTR CCA 90 bp TGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGGTCAGGGGCCCCTCTGAGGCTCAGGTGTaGGAGTGTCAGGGCTCAGGA +
Preference number: 2 (lower is better)
Translates to: WCPHGPGAGLRRSGVRGPSEAQV*ECQGSG
Trigger: TCCTGAGCCCTGACACTCCCACACCTGAGCCTCAGA...GGGGCCCCTGACCCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR-3UTR GCA 90 bp GTCCAGGAACCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCGGAGTCTTGGCCTGGTaGTCACAGCCAAGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: VQEPRQHCTGARTVREQAGVLAW*SQPSCS
Trigger: GGAGCAGCTTGGCTGTGAGCACCAGGCCAAGACTCC...GGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGGTTCCTGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR-3UTR CCA 90 bp GGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGGCCTCGGGAGTCGCAGGACTaGGCTGCCTGTTCTCAGGAG +
Preference number: 2 (lower is better)
Translates to: GRARSAASTGLGCWNTGPRESQD*AACSQE
Trigger: CTCCTGAGAACAGGCAGCCCAGTCCTGCGACTCCCG...AGGCCCAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR-3UTR CCA 90 bp TTTGGGGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGTCAGGAGTCTTGGCCTaGTGCTCACAGCCAAGCTGC +
Preference number: 2 (lower is better)
Translates to: FGEEHGALLARGLGVGTLSGVLA*CSQPSC
Trigger: GCAGCTTGGCTGTGAGCACCAGGCCAAGACTCCTGA...CAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR-3UTR GCA 90 bp GACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGGTCTGGTCCTGGGGATaGGGGAGTCGCAGGACTGGG +
Preference number: 2 (lower is better)
Translates to: DLPEEFEIISLECRGRPLVWSWG*GSRRTG
Trigger: CCCAGTCCTGCGACTCCCGCATCCCCAGGACCAGAC...CAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR-3UTR CCA 90 bp TTTGGGGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGTGTTCTCAGGAGTCTTaGCCTGGTGCTCACAGCCAA +
Preference number: 2 (lower is better)
Translates to: FGEEHGALLARGLGVGTLCSQES*PGAHSQ
Trigger: TTGGCTGTGAGCACCAGGCCAAGACTCCTGAGAACA...CAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR-3UTR CCA 90 bp GACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGTGGGTGTTGGAACACTaGGCCTCCTGCCTGGGGTCT +
Preference number: 2 (lower is better)
Translates to: DLPEEFEIISLECRGRPLWVLEH*ASCLGS
Trigger: AGACCCCAGGCAGGAGGCCCAGTGTTCCAACACCCA...CAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR-3UTR CCA 90 bp AGGAAACAAGGCGCTTGTTTTCTCTTTGCACAGGCAGGGAGGGTGTTCCTGAGTACGGGGCTTGGGTGTTaGAACACTGGGCCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: RKQGACFLFAQAGRVFLSTGLGC*NTGPPA
Trigger: GGCAGGAGGCCCAGTGTTCCAACACCCAAGCCCCGT...ACTCAGGAACACCCTCCCTGCCTGTGCAAAGAGAAAACAAGCGCCTTGTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR-3UTR TCA 90 bp GGGAGTGTCAGGGCTCAGGACATAGGTATTAGAATCCCAGGGTATGAAGTTTCACTCCTGCCTGGGGTCTaGGATGACAGAGTAGGGGGT +
Preference number: 2 (lower is better)
Translates to: GSVRAQDIGIRIPGYEVSLLPGV*DDRVGG
Trigger: ACCCCCTACTCTGTCATCTCAGACCCCAGGCAGGAG...TGAAACTTCATACCCTGGGATTCTAATACCTATGTCCTGAGCCCTGACACTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR-3UTR TCA 90 bp CTGAGTGACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGGCCTGGGGTCTGAGATaGCAGAGTAGGGGGTTAAAT +
Preference number: 2 (lower is better)
Translates to: LSDLPEEFEIISLECRGRAWGLR*QSRGLN
Trigger: ATTTAACCCCCTACTCTGTCATCTCAGACCCCAGGC...CCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTCACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR-3UTR TCA 90 bp CTGAGTGACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGGGGGAATTAGAGCCGTaGGTATTTGGGGAAGAGCAC +
Preference number: 2 (lower is better)
Translates to: LSDLPEEFEIISLECRGRGELEP*VFGEEH
Trigger: GTGCTCTTCCCCAAATACTCACGGCTCTAATTCCCC...CCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTCACTCAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR-3UTR CCA 90 bp AGGAAACAAGGCGCTTGTTTTCTCTTTGCACAGGCAGGGAGGGTGTTCCTGAGTATGAAGTTTCAGGTTTaGGGAATTAGAGCCGTGAGT +
Preference number: 2 (lower is better)
Translates to: RKQGACFLFAQAGRVFLSMKFQV*GIRAVS
Trigger: ACTCACGGCTCTAATTCCCCAAACCTGAAACTTCAT...ACTCAGGAACACCCTCCCTGCCTGTGCAAAGAGAAAACAAGCGCCTTGTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR GCA 72 bp AGGATGGGCCCAGGGGTCCAGGAACCAAGGCAGCACTaGACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCC +
Preference number: 3 (lower is better)
Translates to: RMGPGVQEPRQH*TGARTVREQAS
Trigger: GGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGGTTCCTGGACCCCTGGGCCCATCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR CCA 72 bp AATGCCCAGGTATCAAGTATCCAGGTCCCAGGTGTCTaGTCCTGGGGATGCGGGAGTCGCAGGACTGGGCTG +
Preference number: 3 (lower is better)
Translates to: NAQVSSIQVPGV*SWGCGSRRTGL
Trigger: CAGCCCAGTCCTGCGACTCCCGCATCCCCAGGACCAGACACCTGGGACCTGGATACTTGATACCTGGGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR-3UTR CAA 90 bp TCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGCCGCTCACGGGGCTTGGGTGTaGGAACACTGGGCCTCCTGC +
Preference number: 3 (lower is better)
Translates to: SRRVRNYKPGVPREASAAHGAWV*EHWASC
Trigger: GCAGGAGGCCCAGTGTTCCAACACCCAAGCCCCGTG...AGCGGCAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR GCA 72 bp GACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTaGCGAGGGAGGCCTCTGCCGCTGGGGGTCTCGCTG +
Preference number: 3 (lower is better)
Translates to: DLPEEFEIISLE*RGRPLPLGVSL
Trigger: CAGCGAGACCCCCAGCGGCAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358321.4
3UTR CCA 72 bp AAGTTTCAGGTTTGGGGAATTAGAGCCGTGAGTATTTaGGGAAGAGCACGGAGCGCTGCTAGCACGGGGCTT +
Preference number: 3 (lower is better)
Translates to: KFQVWGIRAVSI*GRARSAASTGL
Trigger: AAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCCCCAAATACTCACGGCTCTAATTCCCCAAACCTGAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp TGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGGTCAGGGGCCCCGGGCCTGGGTCAGGGTaGAGGGGCAGTCCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: WCPHGPGAGLRRSGVRGPGPGSG*RGSPAA
Trigger: AGCTGCCGGACTGCCCCTGCACCCTGACCCAGGCCC...GGGGCCCCTGACCCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp TGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGGTCAGGGGCCCCCAGCCTGGCAGGTGCTaGTCTCTGCCCCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: WCPHGPGAGLRRSGVRGPQPGRC*SLPRPG
Trigger: GCCTGGCCGGGGCAGAGACCAGCACCTGCCAGGCTG...GGGGCCCCTGACCCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp TGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGGTCAGGGGCCCCCCCCGGGGTGGTAGGTaGACACGCTGCCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: WCPHGPGAGLRRSGVRGPPRGGR*TRCPAP
Trigger: TGGAGCAGGGCAGCGTGTGCACCTACCACCCCGGGG...GGGGCCCCTGACCCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCA
72% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp GCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGCGTGCGGAACGGGGGTaGGCCCCAGTCATGGCCGCG +
Preference number: 4 (lower is better)
Translates to: AALHWCPHGPGAGLRRSGRAERG*APVMAA
Trigger: CGCGGCCATGACTGGGGCGCACCCCCGTTCCGCACG...CCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp TGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGGTCAGGGGCCCCGCCAGTGGGACATGCTaGGCACTCGGGGTGGCGTGC +
Preference number: 4 (lower is better)
Translates to: WCPHGPGAGLRRSGVRGPASGTC*ALGVAC
Trigger: GCACGCCACCCCGAGTGCCCAGCATGTCCCACTGGC...GGGGCCCCTGACCCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp GGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGGCCTACGGGCCCTGCACGCTaGCCTCCAGGCCGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GRARSAASTGLGCWNTGPTGPAR*PPGRPL
Trigger: CAGGGGCCGGCCTGGAGGTCAGCGTGCAGGGCCCGT...AGGCCCAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp GTCCAGGAACCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCGCACTTCGGGGTGGGTaGGGACCAGGTGCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: VQEPRQHCTGARTVREQAALRGG*GPGAVS
Trigger: GCTGACGGCACCTGGTCCTCACCCACCCCGAAGTGC...GGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGGTTCCTGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp TGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGGTCAGGGGCCCCCAGGTCGGTCAGCGCTaGCTCCAGCAGCACGTACTC +
Preference number: 4 (lower is better)
Translates to: WCPHGPGAGLRRSGVRGPQVGQR*LQQHVL
Trigger: GAGTACGTGCTGCTGGAGGCAGCGCTGACCGACCTG...GGGGCCCCTGACCCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp TGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGGTCAGGGGCCCCTGTGCACCCCAGACGTaGGTGTTGCCCTTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: WCPHGPGAGLRRSGVRGPCAPQT*VLPFLR
Trigger: CCGCAGGAAGGGCAACACGCACGTCTGGGGTGCACA...GGGGCCCCTGACCCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp GTCCAGGAACCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCGCAGCACTGCACTGGTaGCCGCACGGTCCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: VQEPRQHCTGARTVREQAAALHW*PHGPGA
Trigger: TGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGC...GGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGGTTCCTGGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp TGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGGTCAGGGGCCCCGTCCCGAGGAGGCCGTaGGTGTGGGTGAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: WCPHGPGAGLRRSGVRGPVPRRP*VWVRNF
Trigger: GAAGTTCCTCACCCACACCCACGGCCTCCTCGGGAC...GGGGCCCCTGACCCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GTCCAGGAACCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCCGACGCTGGTGCAGCTaGTGGGCCACCCGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: VQEPRQHCTGARTVREQARRWCS*WATRVA
Trigger: TGCCACTCGGGTGGCCCACCAGCTGCACCAGCGTCG...GGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGGTTCCTGGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp TGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGGTCAGGGGCCCCCCTCCTTTTGTCCGTTaGGAGGTGGGGCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: WCPHGPGAGLRRSGVRGPPPFVR*EVGPAS
Trigger: GCTGGCTGGCCCCACCTCCCAACGGACAAAAGGAGG...GGGGCCCCTGACCCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCA
70% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp TGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGGTCAGGGGCCCCCGGGAGTCGCAGGACTaGGCTGCCTGTTCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: WCPHGPGAGLRRSGVRGPRESQD*AACSQE
Trigger: CTCCTGAGAACAGGCAGCCCAGTCCTGCGACTCCCG...GGGGCCCCTGACCCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp TGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGGTCAGGGGCCCCGACTTCCACCACATCTaGGTTGCCCTCCTGGACGGC +
Preference number: 4 (lower is better)
Translates to: WCPHGPGAGLRRSGVRGPDFHHI*VALLDG
Trigger: GCCGTCCAGGAGGGCAACTCAGATGTGGTGGAAGTC...GGGGCCCCTGACCCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp TGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGGTCAGGGGCCCCTCCAGCTCTGCTCGGTaGAGCTCAGCACCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: WCPHGPGAGLRRSGVRGPSSSAR*SSAPPG
Trigger: ACCAGGAGGTGCTGAGCTTCACCGAGCAGAGCTGGA...GGGGCCCCTGACCCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp GCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGCTCCAGGCCGGCCCCTaGTGCCAGCATGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: AALHWCPHGPGAGLRRSGLQAGP*CQHDGD
Trigger: GTCTCCATCATGCTGGCATCAGGGGCCGGCCTGGAG...CCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp GTCCAGGAACCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCCGGTGGGGTCGTTGTTaGGTGTCCCGAGGAGGCCGT +
Preference number: 4 (lower is better)
Translates to: VQEPRQHCTGARTVREQARWGRC*VSRGGR
Trigger: ACGGCCTCCTCGGGACACTCAACAACGACCCCACCG...GGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGGTTCCTGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp TGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGGTCAGGGGCCCCCCACCACATCTGAGTTaGCCTCCTGGACGGCCACTG +
Preference number: 4 (lower is better)
Translates to: WCPHGPGAGLRRSGVRGPPPHLS*PPGRPL
Trigger: CAGTGGCCGTCCAGGAGGGCAACTCAGATGTGGTGG...GGGGCCCCTGACCCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp CCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCGTCAGCCTGGCAGGTaGTGGTCTCTGCCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: PRQHCTGARTVREQASVDRQPGR*WSLPRP
Trigger: TGGCCGGGGCAGAGACCAGCACCTGCCAGGCTGACG...ATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GTCCAGGAACCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTGCCAGGCCAGTGCGTaGTCGTTGGTCCAGAGCGCC +
Preference number: 4 (lower is better)
Translates to: VQEPRQHCTGARTVREQACQASA*SLVQSA
Trigger: GGCGCTCTGGACCAACGACCACGCACTGGCCTGGCA...GGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGGTTCCTGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp CCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCGCTGGTGCAGCTGGTaGGCCACCCGAGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PRQHCTGARTVREQASVDRWCSW*ATRVAV
Trigger: CACTGCCACTCGGGTGGCCCACCAGCTGCACCAGCG...ATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GTCCAGGAACCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCGCTGGCACTTCGGGGTaGGTGAGGACCAGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: VQEPRQHCTGARTVREQAAGTSG*VRTRCR
Trigger: ACGGCACCTGGTCCTCACCCACCCCGAAGTGCCAGC...GGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGGTTCCTGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp CCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCGCGTAGCTGCGTCCTaGCTGGCACTTCGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PRQHCTGARTVREQASVDRVAAS*LALRGG
Trigger: CCCACCCCGAAGTGCCAGCCAGGACGCAGCTACGCG...ATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGAAGGCAGCACTGCACTaGTGCCCGCACGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: AALHWCPHGPGAGLRRSGKAALH*CPHGPG
Trigger: TCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTT...CCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp CCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCCCCTGATGCCAGCATaGTGGAGACCCTGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: PRQHCTGARTVREQASVDPLMPA*WRPCPR
Trigger: CCGGGGACAGGGTCTCCATCATGCTGGCATCAGGGG...ATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp CCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATTGGGTGAGGACCAGGTaGCGTCAGCCTGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PRQHCTGARTVREQASVDWVRTR*RQPGRC
Trigger: GCACCTGCCAGGCTGACGGCACCTGGTCCTCACCCA...ATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGCCAGTGCGTGGTCGTTaGTCCAGAGCGCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: AALHWCPHGPGAGLRRSGPVRGR*SRAPAR
Trigger: ACGTGCAGGCGCTCTGGACCAACGACCACGCACTGG...CCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GTCCAGGAACCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCACGGGGCTTGGGTGTTaGAACACTGGGCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: VQEPRQHCTGARTVREQATGLGC*NTGPPA
Trigger: GGCAGGAGGCCCAGTGTTCCAACACCCAAGCCCCGT...GGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGGTTCCTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp GGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGGCCTGCTCTCTTGGGCATCTaGTGTGGGTCCGGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GRARSAASTGLGCWNTGPALLGI*CGSGAR
Trigger: CCGGGCCCCGGACCCACAGCAGATGCCCAAGAGAGC...AGGCCCAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp CCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATTTGGTCCAGAGCGCCTaGACGTCCTTCTGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: PRQHCTGARTVREQASVDLVQSA*TSFCPA
Trigger: CGCAGGGCAGAAGGACGTGCAGGCGCTCTGGACCAA...ATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp GTCCAGGAACCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTACCGGAGGCTGGCCTaGACAGAACGCACACAGTGC +
Preference number: 4 (lower is better)
Translates to: VQEPRQHCTGARTVREQAYRRLA*TERTQC
Trigger: GCACTGTGTGCGTTCTGTGCAGGCCAGCCTCCGGTA...GGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGGTTCCTGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp TTTGGGGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGGCTGGGCCCGCGCCTaGACCCTCAGGTCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: FGEEHGALLARGLGVGTLGWARA*TLRSVS
Trigger: GCTGACCGACCTGAGGGTGCAGGCGCGGGCCCAGCC...CAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCCCCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp GGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGGCCTCTCCTGGACGGCCACTaGGGTCAGCCCAGTGCCACG +
Preference number: 4 (lower is better)
Translates to: GRARSAASTGLGCWNTGPLLDGH*GQPSAT
Trigger: CGTGGCACTGGGCTGACCGCAGTGGCCGTCCAGGAG...AGGCCCAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp CCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATAGCCGTACCGGAGGCTaGCCTGCACAGAACGCACAC +
Preference number: 4 (lower is better)
Translates to: PRQHCTGARTVREQASVDSRTGG*PAQNAH
Trigger: GTGTGCGTTCTGTGCAGGCCAGCCTCCGGTACGGCT...ATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp CCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATGCCACAGGACACCACTaGCTGCAGGCTCTGCATGCG +
Preference number: 4 (lower is better)
Translates to: PRQHCTGARTVREQASVDATGHH*LQALHA
Trigger: CGCATGCAGAGCCTGCAGCCAGTGGTGTCCTGTGGC...ATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp GGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGGCCTAGAGCCAGTGGGACATaGTGGGCACTCGGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: GRARSAASTGLGCWNTGPRASGT*WALGVA
Trigger: CGCCACCCCGAGTGCCCAGCATGTCCCACTGGCTCT...AGGCCCAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp GCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGTGCTCACAGCCAAGCTaGTCCCATCAGGGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: AALHWCPHGPGAGLRRSGCSQPS*SHQGCA
Trigger: TGCACAGCCCTGATGGGAGCAGCTTGGCTGTGAGCA...CCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp TGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGGTCAGGGGCCCCTCATTGACACTTTGTTaGGGTGCACAGCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: WCPHGPGAGLRRSGVRGPSLTLC*GAQPAR
Trigger: CCTGGCTGGCTGTGCACCCCAACAAAGTGTCAATGA...GGGGCCCCTGACCCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GTCCAGGAACCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCAGGAGTCTTGGCCTaGTGCTCACAGCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: VQEPRQHCTGARTVREQASGVLA*CSQPSC
Trigger: GCAGCTTGGCTGTGAGCACCAGGCCAAGACTCCTGA...GGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGGTTCCTGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGGCCTCCAGGTGTCTGGTCCTaGGGATGCGGGAGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: GRARSAASTGLGCWNTGPPGVWS*GCGSRR
Trigger: CCTGCGACTCCCGCATCCCCAGGACCAGACACCTGG...AGGCCCAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GTCCAGGAACCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCTCGCTGTCTGCTTTaGGGTTCTGGGGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VQEPRQHCTGARTVREQASRCLL*GSGASP
Trigger: AGGAGAGGCCCCAGAACCCCAAAGCAGACAGCGAGA...GGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGGTTCCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp GGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGGCCTCCCACAGTTCGATGGTaGTGGTCTGCGTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GRARSAASTGLGCWNTGPPTVRW*WSAWAA
Trigger: CGCTGCCCACGCAGACCATCACCATCGAACTGTGGG...AGGCCCAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp GTCCAGGAACCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCACCAGGAATCGTAGGTaGGCAGGGAGGACGCATTGT +
Preference number: 4 (lower is better)
Translates to: VQEPRQHCTGARTVREQATRNRR*AGRTHC
Trigger: ACAATGCGTCCTCCCTGCTCACCTACGATTCCTGGT...GGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGGTTCCTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp GTCCAGGAACCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCCAGGGAGGGTGTTCCTaGGTGACCTTCCAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: VQEPRQHCTGARTVREQAQGGCS*VTFQKS
Trigger: ACTCTTCTGGAAGGTCACTCAGGAACACCCTCCCTG...GGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGGTTCCTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp CCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATAGGTCCATCCAGCTCTaGTCGGTGAAGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: PRQHCTGARTVREQASVDRSIQL*SVKLST
Trigger: GGTGCTGAGCTTCACCGAGCAGAGCTGGATGGACCT...ATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp GGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGGCCTGCTGCAGGCTCTGCATaGGACGCTGGTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GRARSAASTGLGCWNTGPAAGSA*DAGAAG
Trigger: ACCAGCTGCACCAGCGTCGCATGCAGAGCCTGCAGC...AGGCCCAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp TTTGGGGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGGGTCTCCGTGCCGTTaGACATCGTCCCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FGEEHGALLARGLGVGTLGSPCR*TSSRAG
Trigger: CCCAGCCCGGGACGATGTCCAACGGCACGGAGACCC...CAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCCCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GTCCAGGAACCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCCACAGTGGAAGTAGATaGTGGAACCCGCCAGGTACC +
Preference number: 4 (lower is better)
Translates to: VQEPRQHCTGARTVREQAHSGSR*WNPPGT
Trigger: GGTACCTGGCGGGTTCCACCATCTACTTCCACTGTG...GGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGGTTCCTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp CCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATTCTGAGGCTCAGGTGTaGGAGTGTCAGGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: PRQHCTGARTVREQASVDSEAQV*ECQGSG
Trigger: TCCTGAGCCCTGACACTCCCACACCTGAGCCTCAGA...ATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp GGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGGCCTGTGGCCGTTGTCCAGTaGCACAGTGAAGGGGATGCG +
Preference number: 4 (lower is better)
Translates to: GRARSAASTGLGCWNTGPVAVVQ*HSEGDA
Trigger: CGCATCCCCTTCACTGTGTCACTGGACAACGGCCAC...AGGCCCAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp TTTGGGGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGCCCAGACGTGCGTGTTaGCCTTCCTGCGGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: FGEEHGALLARGLGVGTLPRRAC*PSCGAA
Trigger: TGCTGCGCCGCAGGAAGGGCAACACGCACGTCTGGG...CAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCCCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp GGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGGCCTGGAGTCTTGGCCTGGTaGTCACAGCCAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GRARSAASTGLGCWNTGPGVLAW*SQPSCS
Trigger: GGAGCAGCTTGGCTGTGAGCACCAGGCCAAGACTCC...AGGCCCAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp CCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATGGGTCGTGCTTGGGTTaGTACAGGAAGTTGTGGACC +
Preference number: 4 (lower is better)
Translates to: PRQHCTGARTVREQASVDGSCLG*YRKLWT
Trigger: GGTCCACAACTTCCTGTACCAACCCAAGCACGACCC...ATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGAGGTGGGGTCGTGCTTaGGTTGGTACAGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: AALHWCPHGPGAGLRRSGRWGRA*VGTGSC
Trigger: ACAACTTCCTGTACCAACCCAAGCACGACCCCACCT...CCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp CCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATTGCTCAGGCTCCCAGTaGCTGCCACATCAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: PRQHCTGARTVREQASVDCSGSQ*LPHQSC
Trigger: GCAACTTTGATGTGGCAGCCACTGGGAGCCTGAGCA...ATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp TTTGGGGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGGAGGCCTCTGCCGCTaGGGGTCTCGCTGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: FGEEHGALLARGLGVGTLGGLCR*GSRCLL
Trigger: AAGCAGACAGCGAGACCCCCAGCGGCAGAGGCCTCC...CAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCCCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp CCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATGCCTGGGGTCTGAGATaGCAGAGTAGGGGGTTAAAT +
Preference number: 4 (lower is better)
Translates to: PRQHCTGARTVREQASVDAWGLR*QSRGLN
Trigger: ATTTAACCCCCTACTCTGTCATCTCAGACCCCAGGC...ATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp TTTGGGGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGACTGGCTGCAGGCTCTaGATGCGACGCTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: FGEEHGALLARGLGVGTLTGCRL*MRRWCS
Trigger: GCTGCACCAGCGTCGCATGCAGAGCCTGCAGCCAGT...CAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCCCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp TTTGGGGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGCAGGACACCACTGGCTaGAGGCTCTGCATGCGACGC +
Preference number: 4 (lower is better)
Translates to: FGEEHGALLARGLGVGTLQDTTG*RLCMRR
Trigger: GCGTCGCATGCAGAGCCTGCAGCCAGTGGTGTCCTG...CAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCCCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp TTTGGGGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGACAGCACCGCGTAGCTaGGTCCTGGCTGGCACTTCG +
Preference number: 4 (lower is better)
Translates to: FGEEHGALLARGLGVGTLTAPRS*VLAGTS
Trigger: CGAAGTGCCAGCCAGGACGCAGCTACGCGGTGCTGT...CAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCCCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp TTTGGGGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGAACCAAGGCAGCACTaGACTGGTGCCCGCACGGTC +
Preference number: 4 (lower is better)
Translates to: FGEEHGALLARGLGVGTLEPRQH*TGARTV
Trigger: GACCGTGCGGGCACCAGTGCAGTGCTGCCTTGGTTC...CAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCCCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp GCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGCGCTTGTTTTCTCTTTaGACAGGCAGGGAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: AALHWCPHGPGAGLRRSGRLFSL*TGREGV
Trigger: AACACCCTCCCTGCCTGTGCAAAGAGAAAACAAGCG...CCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp TTTGGGGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGAGTGCTGCCGCCGCTaGAGTCAGCTGTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: FGEEHGALLARGLGVGTLECCRR*SQLSGA
Trigger: AGCTCCTGACAGCTGACTCCAGCGGCGGCAGCACTC...CAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCCCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp GGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGGCCTTCCTGTTGGCCAGCCTaGCTTCCACCACATCTGAGT +
Preference number: 4 (lower is better)
Translates to: GRARSAASTGLGCWNTGPSCWPA*LPPHLS
Trigger: ACTCAGATGTGGTGGAAGTCAGGCTGGCCAACAGGA...AGGCCCAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp GGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGGCCTTCGATGGTGATGGTCTaGGTGGGCAGCGACTTGACA +
Preference number: 4 (lower is better)
Translates to: GRARSAASTGLGCWNTGPSMVMV*VGSDLT
Trigger: TGTCAAGTCGCTGCCCACGCAGACCATCACCATCGA...AGGCCCAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp TTTGGGGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGAAGTCATCGCTCAGGTaGCAGGCCAGTGCGTGGTCG +
Preference number: 4 (lower is better)
Translates to: FGEEHGALLARGLGVGTLKSSLR*QASAWS
Trigger: CGACCACGCACTGGCCTGGCACCTGAGCGATGACTT...CAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp CTGAGTGACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGGGCCGCGGTCGGGAGTaGTGCCGCCGCTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LSDLPEEFEIISLECRGRGRGRE*CRRWSQ
Trigger: CTGACTCCAGCGGCGGCAGCACTCCCGACCGCGGCC...CCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTCACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp TCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGCCGCTCTGCGGTCAGCCCAGTaGCACGGGTCTCCGTGCCGT +
Preference number: 4 (lower is better)
Translates to: SRRVRNYKPGVPREASAALRSAQ*HGSPCR
Trigger: ACGGCACGGAGACCCGTGGCACTGGGCTGACCGCAG...AGCGGCAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp TCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGCCGCTCTCAGGAACGGGCCCTaGACGCTGACCTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: SRRVRNYKPGVPREASAALRNGP*TLTSRP
Trigger: CGGCCTGGAGGTCAGCGTGCAGGGCCCGTTCCTGAG...AGCGGCAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp CTGAGTGACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGGCTCCTGGGGACTGGTaGCTGGGGGCAGGACGCGCC +
Preference number: 4 (lower is better)
Translates to: LSDLPEEFEIISLECRGRAPGDW*LGAGRA
Trigger: GGCGCGTCCTGCCCCCAGGCACCAGTCCCCAGGAGC...CCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTCACTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp TCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGCCGCTGCAGGTGCTGGTCTCTaGCCCGGCCAGGCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: SRRVRNYKPGVPREASAAAGAGL*PGQAVA
Trigger: GGCTACAGCCTGGCCGGGGCAGAGACCAGCACCTGC...AGCGGCAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp TGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGGTCAGGGGCCCCATGAAGTTTCAGGTTTaGGGAATTAGAGCCGTGAGT +
Preference number: 4 (lower is better)
Translates to: WCPHGPGAGLRRSGVRGPMKFQV*GIRAVS
Trigger: ACTCACGGCTCTAATTCCCCAAACCTGAAACTTCAT...GGGGCCCCTGACCCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp TCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGCCGCTTCCCAGGCCTGGCACTaGGTTCGTGCCCAGGCCACA +
Preference number: 4 (lower is better)
Translates to: SRRVRNYKPGVPREASAASQAWH*VRAQAT
Trigger: TGTGGCCTGGGCACGAACTCAGTGCCAGGCCTGGGA...AGCGGCAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp GACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGGCAGCACTGCTGACCTaGGCCGTACCGGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: DLPEEFEIISLECRGRPLAALLT*AVPEAG
Trigger: GCCAGCCTCCGGTACGGCTCAGGTCAGCAGTGCTGC...CAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp AGGAAACAAGGCGCTTGTTTTCTCTTTGCACAGGCAGGGAGGGTGTTCCTGAGTGCCGAGGGAGGCCTCTaGCGCTGGGGGTCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: RKQGACFLFAQAGRVFLSAEGGL*RWGSRC
Trigger: ACAGCGAGACCCCCAGCGGCAGAGGCCTCCCTCGGC...ACTCAGGAACACCCTCCCTGCCTGTGCAAAGAGAAAACAAGCGCCTTGTTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGGGCGGAGGCCAGTCTTaGGGGCCGGTAGTTGCGGCA +
Preference number: 4 (lower is better)
Translates to: DLPEEFEIISLECRGRPLGGGQS*GPVVAA
Trigger: TGCCGCAACTACCGGCCCCCAAGACTGGCCTCCGCC...CAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp CTGAGTGACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGGCCCGCTGTGCAGGGTaGAGTCGTCGGTGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: LSDLPEEFEIISLECRGRARCAG*SRRWGR
Trigger: ACGACCCCACCGACGACTTCACCCTGCACAGCGGGC...CCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTCACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp GTCCAGGAACCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCAAAGTTGCAGAAATaGTCGTCCCCACATAGTTTG +
Preference number: 4 (lower is better)
Translates to: VQEPRQHCTGARTVREQASKLQK*SSPHSL
Trigger: CAAACTATGTGGGGACGATCATTTCTGCAACTTTGA...GGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGGTTCCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp CTGAGTGACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCACCCGAGTGGCAGTaGCCGTGCTCAGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LSDLPEEFEIISLECRGRPPEWQ*PCSGSQ
Trigger: CTGGGAGCCTGAGCACGGGCACTGCCACTCGGGTGG...CCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTCACTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp TCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGCCGCTTCTGAGTTGCCCTCCTaGACGGCCACTGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SRRVRNYKPGVPREASAASELPS*TATAVS
Trigger: GCTGACCGCAGTGGCCGTCCAGGAGGGCAACTCAGA...AGCGGCAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GGGAGTGTCAGGGCTCAGGACATAGGTATTAGAATCCCAGGGTATGAAGTTTCACTGGGGACTGGTGCCTaGGGGCAGGACGCGCCCGCT +
Preference number: 4 (lower is better)
Translates to: GSVRAQDIGIRIPGYEVSLGTGA*GQDAPA
Trigger: AGCGGGCGCGTCCTGCCCCCAGGCACCAGTCCCCAG...TGAAACTTCATACCCTGGGATTCTAATACCTATGTCCTGAGCCCTGACACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp GGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGGCCTAGCAGTAATAGAAGCTaGGGACATCGTAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: GRARSAASTGLGCWNTGPSSNRS*GHRRAS
Trigger: ACTGGCTCTACGATGTCCTCAGCTTCTATTACTGCT...AGGCCCAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp GACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGGGCCGTGGGTGTGGGTaGGGAACTTCTCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: DLPEEFEIISLECRGRPLGRGCG*GTSQAA
Trigger: TGCTGCCTGAGAAGTTCCTCACCCACACCCACGGCC...CAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp GACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGCGAGGCCCCCAAAGATaGTGCCCAACAGCACCGCGT +
Preference number: 4 (lower is better)
Translates to: DLPEEFEIISLECRGRPLRGPQR*CPTAPR
Trigger: ACGCGGTGCTGTTGGGCATCATCTTTGGGGGCCTCG...CAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp TTTGGGGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGGGGAATTAGAGCCGTaGGTATTTGGGGAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: FGEEHGALLARGLGVGTLGELEP*VFGEEH
Trigger: GTGCTCTTCCCCAAATACTCACGGCTCTAATTCCCC...CAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCCCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp TTTGGGGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGAGGGTGTTCCTGAGTaGCCTTCCAGAAGAGTTCGA +
Preference number: 4 (lower is better)
Translates to: FGEEHGALLARGLGVGTLEGVPE*PSRRVR
Trigger: TCGAACTCTTCTGGAAGGTCACTCAGGAACACCCTC...CAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp GGGAGTGTCAGGGCTCAGGACATAGGTATTAGAATCCCAGGGTATGAAGTTTCACGCGGTCGGGAGTGCTaGCGCCGCTGGAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GSVRAQDIGIRIPGYEVSRGREC*RRWSQL
Trigger: CAGCTGACTCCAGCGGCGGCAGCACTCCCGACCGCG...TGAAACTTCATACCCTGGGATTCTAATACCTATGTCCTGAGCCCTGACACTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp AGGAAACAAGGCGCTTGTTTTCTCTTTGCACAGGCAGGGAGGGTGTTCCTGAGTAGGACGCGCCCGCTGTaGAGGGTGAAGTCGTCGGTG +
Preference number: 4 (lower is better)
Translates to: RKQGACFLFAQAGRVFLSRTRPL*RVKSSV
Trigger: CACCGACGACTTCACCCTGCACAGCGGGCGCGTCCT...ACTCAGGAACACCCTCCCTGCCTGTGCAAAGAGAAAACAAGCGCCTTGTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp CTGAGTGACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGGAGTGGCAGTGCCCGTaGTCAGGCTCCCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LSDLPEEFEIISLECRGREWQCP*SGSQWL
Trigger: CAGCCACTGGGAGCCTGAGCACGGGCACTGCCACTC...CCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTCACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp CTGAGTGACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGTGCATGCGACGCTGGTaGAGCTGGTGGGCCACCCGA +
Preference number: 4 (lower is better)
Translates to: LSDLPEEFEIISLECRGRCMRRW*SWWATR
Trigger: TCGGGTGGCCCACCAGCTGCACCAGCGTCGCATGCA...CCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTCACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp TCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGCCGCTGCGTGTTGCCCTTCCTaGGGCGCAGCAGCACATAGA +
Preference number: 4 (lower is better)
Translates to: SRRVRNYKPGVPREASAAACCPS*GAAAHR
Trigger: TCTATGTGCTGCTGCGCCGCAGGAAGGGCAACACGC...AGCGGCAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp CTGAGTGACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGGTCTGGTCCTGGGGATaGGGGAGTCGCAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: LSDLPEEFEIISLECRGRVWSWG*GSRRTG
Trigger: CCCAGTCCTGCGACTCCCGCATCCCCAGGACCAGAC...CCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTCACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GGGAGTGTCAGGGCTCAGGACATAGGTATTAGAATCCCAGGGTATGAAGTTTCACTTGGGCATCTGCTGTaGGTCCGGGGCCCGGGCCGA +
Preference number: 4 (lower is better)
Translates to: GSVRAQDIGIRIPGYEVSLGHLL*VRGPGR
Trigger: TCGGCCCGGGCCCCGGACCCACAGCAGATGCCCAAG...TGAAACTTCATACCCTGGGATTCTAATACCTATGTCCTGAGCCCTGACACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GGGAGTGTCAGGGCTCAGGACATAGGTATTAGAATCCCAGGGTATGAAGTTTCAGGTGCGCCCCAGTCATaGCCGCGGTCGGGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GSVRAQDIGIRIPGYEVSGAPQS*PRSGVL
Trigger: CAGCACTCCCGACCGCGGCCATGACTGGGGCGCACC...TGAAACTTCATACCCTGGGATTCTAATACCTATGTCCTGAGCCCTGACACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGAACAGGAACAGCTCCTaGGGACTGGTGCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: DLPEEFEIISLECRGRPLNRNSS*GLVPGG
Trigger: GCCCCCAGGCACCAGTCCCCAGGAGCTGTTCCTGTT...CAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp TCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGCCGCTAGAGGGGCTCGAAGGTaGGGTCGTGCTTGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SRRVRNYKPGVPREASAARGARR*GRAWVG
Trigger: ACCAACCCAAGCACGACCCCACCTTCGAGCCCCTCT...AGCGGCAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp TTTGGGGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGAGTGGAAGTAGATGGTaGAACCCGCCAGGTACCTGT +
Preference number: 4 (lower is better)
Translates to: FGEEHGALLARGLGVGTLSGSRW*NPPGTC
Trigger: ACAGGTACCTGGCGGGTTCCACCATCTACTTCCACT...CAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp AGGAAACAAGGCGCTTGTTTTCTCTTTGCACAGGCAGGGAGGGTGTTCCTGAGTCAGGTGCCAGGCCAGTaGGTGGTCGTTGGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: RKQGACFLFAQAGRVFLSQVPGQ*VVVGPE
Trigger: CTCTGGACCAACGACCACGCACTGGCCTGGCACCTG...ACTCAGGAACACCCTCCCTGCCTGTGCAAAGAGAAAACAAGCGCCTTGTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp AGGAAACAAGGCGCTTGTTTTCTCTTTGCACAGGCAGGGAGGGTGTTCCTGAGTGCGGGGGCAGTCGGGTaGCCAGAGGCAGCAGTAATA +
Preference number: 4 (lower is better)
Translates to: RKQGACFLFAQAGRVFLSAGAVG*PEAAVI
Trigger: TATTACTGCTGCCTCTGGGCACCCGACTGCCCCCGC...ACTCAGGAACACCCTCCCTGCCTGTGCAAAGAGAAAACAAGCGCCTTGTTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp GACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGAGGGAGGACGCATTGTaGACGGTCCAGTTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: DLPEEFEIISLECRGRPLREDAL*TVQLAP
Trigger: TGGGGCCAACTGGACCGTGCACAATGCGTCCTCCCT...CAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp TCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGCCGCTTTTGGCTGCCTCTTGTaGCAGGCTGGGGTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: SRRVRNYKPGVPREASAAFGCLL*QAGVEG
Trigger: ACCCTCAACCCCAGCCTGGCACAAGAGGCAGCCAAA...AGCGGCAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp GACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGCTCCCATCAGGGCTGTaGACCCCAGACGTGCGTGTT +
Preference number: 4 (lower is better)
Translates to: DLPEEFEIISLECRGRPLLPSGL*TPDVRV
Trigger: AACACGCACGTCTGGGGTGCACAGCCCTGATGGGAG...CAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGTCTCCTTACCCCATCTaGGGTCCCAGGATGGGCCCA +
Preference number: 4 (lower is better)
Translates to: DLPEEFEIISLECRGRPLSPYPI*GPRMGP
Trigger: TGGGCCCATCCTGGGACCCCAGATGGGGTAAGGAGA...CAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp CTGAGTGACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCTCCTGCCTGGGGTCTaGGATGACAGAGTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LSDLPEEFEIISLECRGRLLPGV*DDRVGG
Trigger: ACCCCCTACTCTGTCATCTCAGACCCCAGGCAGGAG...CCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTCACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp CTGAGTGACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGGACACTTTGTTGGGGTaGACAGCCAGCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LSDLPEEFEIISLECRGRDTLLG*TASQVP
Trigger: GGGCACCTGGCTGGCTGTGCACCCCAACAAAGTGTC...CCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTCACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp AGGAAACAAGGCGCTTGTTTTCTCTTTGCACAGGCAGGGAGGGTGTTCCTGAGTGGTAGGTGCACACGCTaGCCTGCTCCATGTCACAGC +
Preference number: 4 (lower is better)
Translates to: RKQGACFLFAQAGRVFLSGRCTR*PAPCHS
Trigger: GCTGTGACATGGAGCAGGGCAGCGTGTGCACCTACC...ACTCAGGAACACCCTCCCTGCCTGTGCAAAGAGAAAACAAGCGCCTTGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp GACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGGAACACTGGGCCTCCTaGCTGGGGTCTGAGATGACA +
Preference number: 4 (lower is better)
Translates to: DLPEEFEIISLECRGRPLEHWAS*LGSEMT
Trigger: TGTCATCTCAGACCCCAGGCAGGAGGCCCAGTGTTC...CAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGATGGAGCAGCTCTCTTaGGCATCTGCTGTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: DLPEEFEIISLECRGRPLMEQLS*ASAVGP
Trigger: CGGACCCACAGCAGATGCCCAAGAGAGCTGCTCCAT...CAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp TCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGCCGCTTGTGCACGGTCCAGTTaGCCCCAAACAGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: SRRVRNYKPGVPREASAACARSS*PQTGTA
Trigger: AGCTGTTCCTGTTTGGGGCCAACTGGACCGTGCACA...AGCGGCAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GGGAGTGTCAGGGCTCAGGACATAGGTATTAGAATCCCAGGGTATGAAGTTTCACTCTGCATGCGACGCTaGTGCAGCTGGTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: GSVRAQDIGIRIPGYEVSLCMRR*CSWWAT
Trigger: GGTGGCCCACCAGCTGCACCAGCGTCGCATGCAGAG...TGAAACTTCATACCCTGGGATTCTAATACCTATGTCCTGAGCCCTGACACTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp TCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGCCGCTAGAGCCGTGAGTATTTaGGGAAGAGCACGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: SRRVRNYKPGVPREASAARAVSI*GRARSA
Trigger: AGCGCTCCGTGCTCTTCCCCAAATACTCACGGCTCT...AGCGGCAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp GACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGTCGAAGGTGGGGTCGTaGTTGGGTTGGTACAGGAAG +
Preference number: 4 (lower is better)
Translates to: DLPEEFEIISLECRGRPLSKVGS*LGWYRK
Trigger: CTTCCTGTACCAACCCAAGCACGACCCCACCTTCGA...CAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp AGGAAACAAGGCGCTTGTTTTCTCTTTGCACAGGCAGGGAGGGTGTTCCTGAGTCCGCCAGGTACCTGTTaGCCTCCTTTTGTCCGTTGG +
Preference number: 4 (lower is better)
Translates to: RKQGACFLFAQAGRVFLSPPGTC*PPFVRW
Trigger: CCAACGGACAAAAGGAGGGCAACAGGTACCTGGCGG...ACTCAGGAACACCCTCCCTGCCTGTGCAAAGAGAAAACAAGCGCCTTGTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp CTGAGTGACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGATTATAAGCCTGGAGTaGCGAGGGAGGCCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: LSDLPEEFEIISLECRGRIISLE*RGRPLP
Trigger: CGGCAGAGGCCTCCCTCGGCACTCCAGGCTTATAAT...CCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTCACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp AGGAAACAAGGCGCTTGTTTTCTCTTTGCACAGGCAGGGAGGGTGTTCCTGAGTAGTTGCGGCAGTCATTaGAGGGCCGCCGTTGCATGT +
Preference number: 4 (lower is better)
Translates to: RKQGACFLFAQAGRVFLSSCGSH*RAAVAC
Trigger: ACATGCAACGGCGGCCCTCCAATGACTGCCGCAACT...ACTCAGGAACACCCTCCCTGCCTGTGCAAAGAGAAAACAAGCGCCTTGTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp AGGAAACAAGGCGCTTGTTTTCTCTTTGCACAGGCAGGGAGGGTGTTCCTGAGTGAAGGTCACAAAGTGTaGGTCTCCGAAGGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: RKQGACFLFAQAGRVFLSEGHKV*VSEGGG
Trigger: GCCTCCGCCTTCGGAGACCCACACTTTGTGACCTTC...ACTCAGGAACACCCTCCCTGCCTGTGCAAAGAGAAAACAAGCGCCTTGTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR TCA 90 bp GGGAGTGTCAGGGCTCAGGACATAGGTATTAGAATCCCAGGGTATGAAGTTTCATGTCCAGTGACACAGTaGAGGGGATGCGGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: GSVRAQDIGIRIPGYEVSCPVTQ*RGCGRS
Trigger: AGAGCGGCCGCATCCCCTTCACTGTGTCACTGGACA...TGAAACTTCATACCCTGGGATTCTAATACCTATGTCCTGAGCCCTGACACTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp GACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGCAGGCTCCCAGTGGCTaGCACATCAAAGTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: DLPEEFEIISLECRGRPLQAPSG*HIKVAE
Trigger: TTCTGCAACTTTGATGTGGCAGCCACTGGGAGCCTG...CAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GGGAGTGTCAGGGCTCAGGACATAGGTATTAGAATCCCAGGGTATGAAGTTTCAAGGAGGCCGTGGGTGTaGGTGAGGAACTTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GSVRAQDIGIRIPGYEVSRRPWV*VRNFSG
Trigger: GCCTGAGAAGTTCCTCACCCACACCCACGGCCTCCT...TGAAACTTCATACCCTGGGATTCTAATACCTATGTCCTGAGCCCTGACACTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GGGAGTGTCAGGGCTCAGGACATAGGTATTAGAATCCCAGGGTATGAAGTTTCAGCTCCTCCAGGAAGTTaGGCAGCTGATCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GSVRAQDIGIRIPGYEVSAPPGS*AADPPA
Trigger: AGCTGGAGGATCAGCTGCCCAACTTCCTGGAGGAGC...TGAAACTTCATACCCTGGGATTCTAATACCTATGTCCTGAGCCCTGACACTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGTGGTACAGGAAGTTGTaGACCAGGAACCAGGAATCG +
Preference number: 4 (lower is better)
Translates to: DLPEEFEIISLECRGRPLWYRKL*TRNQES
Trigger: CGATTCCTGGTTCCTGGTCCACAACTTCCTGTACCA...CAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp GACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGCTGCCACATCAAAGTTaGAGAAATGATCGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: DLPEEFEIISLECRGRPLLPHQS*RNDRPH
Trigger: GTGGGGACGATCATTTCTGCAACTTTGATGTGGCAG...CAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CCA 90 bp GGGAGTGTCAGGGCTCAGGACATAGGTATTAGAATCCCAGGGTATGAAGTTTCATCTGCTTTGGGGTTCTaGGGCCTCTCCTTACCCCAT +
Preference number: 4 (lower is better)
Translates to: GSVRAQDIGIRIPGYEVSSALGF*GLSLPH
Trigger: ATGGGGTAAGGAGAGGCCCCAGAACCCCAAAGCAGA...TGAAACTTCATACCCTGGGATTCTAATACCTATGTCCTGAGCCCTGACACTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR GCA 90 bp GGGAGTGTCAGGGCTCAGGACATAGGTATTAGAATCCCAGGGTATGAAGTTTCACACGTCCTTCTGCCCTaGGTAATTTTTGCTGTCGAT +
Preference number: 4 (lower is better)
Translates to: GSVRAQDIGIRIPGYEVSHVLLP*VIFAVD
Trigger: ATCGACAGCAAAAATTACGCAGGGCAGAAGGACGTG...TGAAACTTCATACCCTGGGATTCTAATACCTATGTCCTGAGCCCTGACACTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS GCA 90 bp GCGTGCGGAACGGGGGTGCGCCCCAGTCATGGCCGCGGTCGGGAGTaGTGCCGCCGCTGGAGTCAGCTGTCAGGAGCTGCGTCCCGTCCG +
Preference number: 5 (lower is better)
Translates to: ACGTGVRPSHGRGRE*CRRWSQLSGAASRP
Trigger: CGGACGGGACGCAGCTCCTGACAGCTGACTCCAGCGGCGGCAGCACTCCCGACCGCGGCCATGACTGGGGCGCACCCCCGTTCCGCACGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 90 bp TGCGGAACGGGGGTGCGCCCCAGTCATGGCCGCGGTCGGGAGTGCTaGCGCCGCTGGAGTCAGCTGTCAGGAGCTGCGTCCCGTCCGCTG +
Preference number: 5 (lower is better)
Translates to: CGTGVRPSHGRGREC*RRWSQLSGAASRPL
Trigger: CAGCGGACGGGACGCAGCTCCTGACAGCTGACTCCAGCGGCGGCAGCACTCCCGACCGCGGCCATGACTGGGGCGCACCCCCGTTCCGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 90 bp CGGGTCTCCGTGCCGTTGGACATCGTCCCGGGCTGGGCCCGCGCCTaGACCCTCAGGTCGGTCAGCGCTGCCTCCAGCAGCACGTACTCT +
Preference number: 5 (lower is better)
Translates to: RVSVPLDIVPGWARA*TLRSVSAASSSTYS
Trigger: AGAGTACGTGCTGCTGGAGGCAGCGCTGACCGACCTGAGGGTGCAGGCGCGGGCCCAGCCCGGGACGATGTCCAACGGCACGGAGACCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS-3UTR CAA 90 bp TGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGGTCAGGGGCCCCCCCTCCTTTTGTCCGTaGGGAGGTGGGGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: WCPHGPGAGLRRSGVRGPPSFCP*GGGASQ
Trigger: CTGGCTGGCCCCACCTCCCAACGGACAAAAGGAGGG...GGGGCCCCTGACCCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCA
71% GC, longest homopolymer 7 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS TCA 90 bp CACACTCAGGAACGGGCCCTGCACGCTGACCTCCAGGCCGGCCCCTaGTGCCAGCATGATGGAGACCCTGTCCCCGGCAGCCACCGACAG +
Preference number: 5 (lower is better)
Translates to: HTQERALHADLQAGP*CQHDGDPVPGSHRQ
Trigger: CTGTCGGTGGCTGCCGGGGACAGGGTCTCCATCATGCTGGCATCAGGGGCCGGCCTGGAGGTCAGCGTGCAGGGCCCGTTCCTGAGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CCA 90 bp CGAAGGCGGAGGCCAGTCTTGGGGGCCGGTAGTTGCGGCAGTCATTaGAGGGCCGCCGTTGCATGTAGCGGGGGCAGTCGGGTGCCCAGA +
Preference number: 5 (lower is better)
Translates to: RRRRPVLGAGSCGSH*RAAVACSGGSRVPR
Trigger: TCTGGGCACCCGACTGCCCCCGCTACATGCAACGGCGGCCCTCCAATGACTGCCGCAACTACCGGCCCCCAAGACTGGCCTCCGCCTTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 90 bp CGTCCCGGGCTGGGCCCGCGCCTGCACCCTCAGGTCGGTCAGCGCTaGCTCCAGCAGCACGTACTCTCCGCGCCCATTGAATGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: RPGLGPRLHPQVGQR*LQQHVLSAPIECEV
Trigger: AACTTCACATTCAATGGGCGCGGAGAGTACGTGCTGCTGGAGGCAGCGCTGACCGACCTGAGGGTGCAGGCGCGGGCCCAGCCCGGGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 90 bp GGCACTTCGGGGTGGGTGAGGACCAGGTGCCGTCAGCCTGGCAGGTaGTGGTCTCTGCCCCGGCCAGGCTGTAGCCGTTGTCACAGTGGA +
Preference number: 5 (lower is better)
Translates to: GTSGWVRTRCRQPGR*WSLPRPGCSRCHSG
Trigger: TCCACTGTGACAACGGCTACAGCCTGGCCGGGGCAGAGACCAGCACCTGCCAGGCTGACGGCACCTGGTCCTCACCCACCCCGAAGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CCA 90 bp AGAGGCATGAAGGCCCAGGGCTTCCCCTCAGTCTCCCTGCAGGAATaGGGAGGAGGTGAGGGCAGCCCGCAGCCTCGCGTGGCTGGACTG +
Preference number: 5 (lower is better)
Translates to: RGMKAQGFPSVSLQE*GGGEGSPQPRVAGL
Trigger: CAGTCCAGCCACGCGAGGCTGCGGGCTGCCCTCACCTCCTCCCCATTCCTGCAGGGAGACTGAGGGGAAGCCCTGGGCCTTCATGCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS-3UTR CAA 90 bp GGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGGCCTCGGGTCTCCGTGCCGTaGGACATCGTCCCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: GRARSAASTGLGCWNTGPRVSVP*DIVPGW
Trigger: CCAGCCCGGGACGATGTCCAACGGCACGGAGACCCG...AGGCCCAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CAA 90 bp GGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGGCCTCCCCAGACGTGCGTGTaGCCCTTCCTGCGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: GRARSAASTGLGCWNTGPPQTCV*PFLRRS
Trigger: GCTGCGCCGCAGGAAGGGCAACACGCACGTCTGGGG...AGGCCCAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS TCA 90 bp CATAGACGAGCGCAACCGCCGCCACCACCGCGAGGCCCCCAAAGATaGTGCCCAACAGCACCGCGTAGCTGCGTCCTGGCTGGCACTTCG +
Preference number: 5 (lower is better)
Translates to: HRRAQPPPPPRGPQR*CPTAPRSCVLAGTS
Trigger: CGAAGTGCCAGCCAGGACGCAGCTACGCGGTGCTGTTGGGCATCATCTTTGGGGGCCTCGCGGTGGTGGCGGCGGTTGCGCTCGTCTATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS TCA 90 bp TCGGCTTTTGACCAGGTGGGTACGACGGGGGCACCTCGGTGGGTGTaGAGGCCTGAGGTCGGACCACCCAGGCCTCTAGCCAGGACTGGG +
Preference number: 5 (lower is better)
Translates to: SAFDQVGTTGAPRWV*RPEVGPPRPLARTG
Trigger: CCCAGTCCTGGCTAGAGGCCTGGGTGGTCCGACCTCAGGCCTTCACACCCACCGAGGTGCCCCCGTCGTACCCACCTGGTCAAAAGCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS GCA 90 bp GGCCACAGGGTCCTCTCGGAAGTCATCGCTCAGGTGCCAGGCCAGTaGGTGGTCGTTGGTCCAGAGCGCCTGCACGTCCTTCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: GHRVLSEVIAQVPGQ*VVVGPERLHVLLPC
Trigger: GCAGGGCAGAAGGACGTGCAGGCGCTCTGGACCAACGACCACGCACTGGCCTGGCACCTGAGCGATGACTTCCGAGAGGACCCTGTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 90 bp GTTCGTGCCCAGGCCACAGGGTCCTCTCGGAAGTCATCGCTCAGGTaGCAGGCCAGTGCGTGGTCGTTGGTCCAGAGCGCCTGCACGTCC +
Preference number: 5 (lower is better)
Translates to: VRAQATGSSRKSSLR*QASAWSLVQSACTS
Trigger: GGACGTGCAGGCGCTCTGGACCAACGACCACGCACTGGCCTGGCACCTGAGCGATGACTTCCGAGAGGACCCTGTGGCCTGGGCACGAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CCA 90 bp GTCCTGTTGGCCAGCCTGACTTCCACCACATCTGAGTTGCCCTCCTaGACGGCCACTGCGGTCAGCCCAGTGCCACGGGTCTCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: VLLASLTSTTSELPS*TATAVSPVPRVSVP
Trigger: CGGCACGGAGACCCGTGGCACTGGGCTGACCGCAGTGGCCGTCCAGGAGGGCAACTCAGATGTGGTGGAAGTCAGGCTGGCCAACAGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CCA 90 bp GGGAGGACATGTCCCACCGTCACGGCCTCTCGGCTTTTGACCAGGTaGGTACGACGGGGGCACCTCGGTGGGTGTGAAGGCCTGAGGTCG +
Preference number: 5 (lower is better)
Translates to: GRTCPTVTASRLLTR*VRRGHLGGCEGLRS
Trigger: CGACCTCAGGCCTTCACACCCACCGAGGTGCCCCCGTCGTACCCACCTGGTCAAAAGCCGAGAGGCCGTGACGGTGGGACATGTCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS TCA 90 bp CTCCAGACCTCCGGTCCTGTTGGCCAGCCTGACTTCCACCACATCTaGGTTGCCCTCCTGGACGGCCACTGCGGTCAGCCCAGTGCCACG +
Preference number: 5 (lower is better)
Translates to: LQTSGPVGQPDFHHI*VALLDGHCGQPSAT
Trigger: CGTGGCACTGGGCTGACCGCAGTGGCCGTCCAGGAGGGCAACTCAGATGTGGTGGAAGTCAGGCTGGCCAACAGGACCGGAGGTCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CCA 90 bp CCCTGCAGTGAATCCCCCATGTTGAGATGCACGTGTGGGTCCCTCTaGCCTTGGCTGCAGCAGCCACACCTGCCTGGGCACGTCCCGAGG +
Preference number: 5 (lower is better)
Translates to: PCSESPMLRCTCGSL*PWLQQPHLPGHVPR
Trigger: CCTCGGGACGTGCCCAGGCAGGTGTGGCTGCTGCAGCCAAGGCCAGAGGGACCCACACGTGCATCTCAACATGGGGGATTCACTGCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS CCA 90 bp ATACTCCACGGTCACTCACAGTTGGCCCCAAACAGGAACAGCTCCTaGGGACTGGTGCCTGGGGGCAGGACGCGCCCGCTGTGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: ILHGHSQLAPNRNSS*GLVPGGRTRPLCRV
Trigger: CACCCTGCACAGCGGGCGCGTCCTGCCCCCAGGCACCAGTCCCCAGGAGCTGTTCCTGTTTGGGGCCAACTGTGAGTGACCGTGGAGTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS-3UTR CAA 90 bp TGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGGTCAGGGGCCCCATCATTGACACTTTGTaGGGGTGCACAGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: WCPHGPGAGLRRSGVRGPIIDTL*GCTASQ
Trigger: CTGGCTGGCTGTGCACCCCAACAAAGTGTCAATGAT...GGGGCCCCTGACCCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS TCA 90 bp CCTGGTTCAGCAGCACCTCCAGACCTCCGGTCCTGTTGGCCAGCCTaGCTTCCACCACATCTGAGTTGCCCTCCTGGACGGCCACTGCGG +
Preference number: 5 (lower is better)
Translates to: PGSAAPPDLRSCWPA*LPPHLSCPPGRPLR
Trigger: CCGCAGTGGCCGTCCAGGAGGGCAACTCAGATGTGGTGGAAGTCAGGCTGGCCAACAGGACCGGAGGTCTGGAGGTGCTGCTGAACCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 90 bp AGGAACTTCTCAGGCAGCAGGACGGACACACTCAGGAACGGGCCCTaGACGCTGACCTCCAGGCCGGCCCCTGATGCCAGCATGATGGAG +
Preference number: 5 (lower is better)
Translates to: RNFSGSRTDTLRNGP*TLTSRPAPDASMME
Trigger: CTCCATCATGCTGGCATCAGGGGCCGGCCTGGAGGTCAGCGTGCAGGGCCCGTTCCTGAGTGTGTCCGTCCTGCTGCCTGAGAAGTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 90 bp TCTGCATGCGACGCTGGTGCAGCTGGTGGGCCACCCGAGTGGCAGTaGCCGTGCTCAGGCTCCCAGTGGCTGCCACATCAAAGTTGCAGA +
Preference number: 5 (lower is better)
Translates to: SACDAGAAGGPPEWQ*PCSGSQWLPHQSCR
Trigger: TCTGCAACTTTGATGTGGCAGCCACTGGGAGCCTGAGCACGGGCACTGCCACTCGGGTGGCCCACCAGCTGCACCAGCGTCGCATGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CCA 90 bp AGATGGTGGAACCCGCCAGGTACCTGTTGCCCTCCTTTTGTCCGTTaGGAGGTGGGGCCAGCCAGCCACAGGACACCACTGGCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: RWWNPPGTCCPPFVR*EVGPASHRTPLAAG
Trigger: GCCTGCAGCCAGTGGTGTCCTGTGGCTGGCTGGCCCCACCTCCCAACGGACAAAAGGAGGGCAACAGGTACCTGGCGGGTTCCACCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS-3UTR CAA 90 bp GGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGGGCCTAGACCTCCGGTCCTGTaGGCCAGCCTGACTTCCACC +
Preference number: 5 (lower is better)
Translates to: GRARSAASTGLGCWNTGPRPPVL*ASLTST
Trigger: GGTGGAAGTCAGGCTGGCCAACAGGACCGGAGGTCT...AGGCCCAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS TCA 90 bp CTTGCGGTGGAACTCCCAGCGGCACCTGAGGTGCAGCCCCTGCAGTaGATCCCCCATGTTGAGATGCACGTGTGGGTCCCTCTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: LAVELPAAPEVQPLQ*IPHVEMHVWVPLAL
Trigger: CAAGGCCAGAGGGACCCACACGTGCATCTCAACATGGGGGATTCACTGCAGGGGCTGCACCTCAGGTGCCGCTGGGAGTTCCACCGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS GCA 90 bp CCATGCTTGCGGTGGAACTCCCAGCGGCACCTGAGGTGCAGCCCCTaGAGTGAATCCCCCATGTTGAGATGCACGTGTGGGTCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: PCLRWNSQRHLRCSP*SESPMLRCTCGSLW
Trigger: CCAGAGGGACCCACACGTGCATCTCAACATGGGGGATTCACTGCAGGGGCTGCACCTCAGGTGCCGCTGGGAGTTCCACCGCAAGCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS-3UTR CAA 90 bp CCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATTACTCTCCGCGCCCATaGAATGTGAAGTTGGTGCCG +
Preference number: 5 (lower is better)
Translates to: PRQHCTGARTVREQASVDYSPRP*NVKLVP
Trigger: CGGCACCAACTTCACATTCAATGGGCGCGGAGAGTA...ATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CAA 90 bp TTTGGGGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGTCGGTGGGGTCGTTGTaGAGTGTCCCGAGGAGGCCG +
Preference number: 5 (lower is better)
Translates to: FGEEHGALLARGLGVGTLSVGSL*SVPRRP
Trigger: CGGCCTCCTCGGGACACTCAACAACGACCCCACCGA...CAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCCCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CAA 90 bp TTTGGGGAAGAGCACGGAGCGCTGCTAGCACGGGGCTTGGGTGTTGGAACACTGTGTGCCAGGCTGGGGTaGAGGGTGGTCTCACTGGGG +
Preference number: 5 (lower is better)
Translates to: FGEEHGALLARGLGVGTLCARLG*RVVSLG
Trigger: CCCCAGTGAGACCACCCTCAACCCCAGCCTGGCACA...CAGTGTTCCAACACCCAAGCCCCGTGCTAGCAGCGCTCCGTGCTCTTCCCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CAA 90 bp CCAAGGCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATGCGCTTGTTTTCTCTTaGCACAGGCAGGGAGGGTGT +
Preference number: 5 (lower is better)
Translates to: PRQHCTGARTVREQASVDALVFS*HRQGGC
Trigger: ACACCCTCCCTGCCTGTGCAAAGAGAAAACAAGCGC...ATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS TCA 90 bp TGTAGCGGGGGCAGTCGGGTGCCCAGAGGCAGCAGTAATAGAAGCTaGGGACATCGTAGAGCCAGTGGGACATGCTGGGCACTCGGGGTG +
Preference number: 5 (lower is better)
Translates to: CSGGSRVPRGSSNRS*GHRRASGTCWALGV
Trigger: CACCCCGAGTGCCCAGCATGTCCCACTGGCTCTACGATGTCCTCAGCTTCTATTACTGCTGCCTCTGGGCACCCGACTGCCCCCGCTACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CCA 90 bp CCTTTCAGGTCCATCCAGCTCTGCTCGGTGAAGCTCAGCACCTCCTaGTTCAGCAGCACCTCCAGACCTCCGGTCCTGTTGGCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PFRSIQLCSVKLSTS*FSSTSRPPVLLASL
Trigger: CAGGCTGGCCAACAGGACCGGAGGTCTGGAGGTGCTGCTGAACCAGGAGGTGCTGAGCTTCACCGAGCAGAGCTGGATGGACCTGAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CCA 90 bp TCGTCGGTGGGGTCGTTGTTGAGTGTCCCGAGGAGGCCGTGGGTGTaGGTGAGGAACTTCTCAGGCAGCAGGACGGACACACTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: SSVGSLLSVPRRPWV*VRNFSGSRTDTLRN
Trigger: GTTCCTGAGTGTGTCCGTCCTGCTGCCTGAGAAGTTCCTCACCCACACCCACGGCCTCCTCGGGACACTCAACAACGACCCCACCGACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CCA 90 bp GTGAAGTCGTCGGTGGGGTCGTTGTTGAGTGTCCCGAGGAGGCCGTaGGTGTGGGTGAGGAACTTCTCAGGCAGCAGGACGGACACACTC +
Preference number: 5 (lower is better)
Translates to: VKSSVGSLLSVPRRP*VWVRNFSGSRTDTL
Trigger: GAGTGTGTCCGTCCTGCTGCCTGAGAAGTTCCTCACCCACACCCACGGCCTCCTCGGGACACTCAACAACGACCCCACCGACGACTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 90 bp GCAGTCATTGGAGGGCCGCCGTTGCATGTAGCGGGGGCAGTCGGGTaGCCAGAGGCAGCAGTAATAGAAGCTGAGGACATCGTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: AVIGGPPLHVAGAVG*PEAAVIEAEDIVEP
Trigger: TGGCTCTACGATGTCCTCAGCTTCTATTACTGCTGCCTCTGGGCACCCGACTGCCCCCGCTACATGCAACGGCGGCCCTCCAATGACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 90 bp CGTTGTCACAGTGGAAGTAGATGGTGGAACCCGCCAGGTACCTGTTaGCCTCCTTTTGTCCGTTGGGAGGTGGGGCCAGCCAGCCACAGG +
Preference number: 5 (lower is better)
Translates to: RCHSGSRWWNPPGTC*PPFVRWEVGPASHR
Trigger: CCTGTGGCTGGCTGGCCCCACCTCCCAACGGACAAAAGGAGGGCAACAGGTACCTGGCGGGTTCCACCATCTACTTCCACTGTGACAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 90 bp AGCCTCGCGTGGCTGGACTGCTCACCTTTCAGGTCCATCCAGCTCTaGTCGGTGAAGCTCAGCACCTCCTGGTTCAGCAGCACCTCCAGA +
Preference number: 5 (lower is better)
Translates to: SLAWLDCSPFRSIQL*SVKLSTSWFSSTSR
Trigger: TCTGGAGGTGCTGCTGAACCAGGAGGTGCTGAGCTTCACCGAGCAGAGCTGGATGGACCTGAAAGGTGAGCAGTCCAGCCACGCGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS CCA 90 bp CCTCTCGGAAGTCATCGCTCAGGTGCCAGGCCAGTGCGTGGTCGTTaGTCCAGAGCGCCTGCACGTCCTTCTGCCCTGCGTAATTTTTGC +
Preference number: 5 (lower is better)
Translates to: PLGSHRSGARPVRGR*SRAPARPSALRNFC
Trigger: GCAAAAATTACGCAGGGCAGAAGGACGTGCAGGCGCTCTGGACCAACGACCACGCACTGGCCTGGCACCTGAGCGATGACTTCCGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CCA 90 bp CTGCCCCGGCCAGGCTGTAGCCGTTGTCACAGTGGAAGTAGATGGTaGAACCCGCCAGGTACCTGTTGCCCTCCTTTTGTCCGTTGGGAG +
Preference number: 5 (lower is better)
Translates to: LPRPGCSRCHSGSRW*NPPGTCCPPFVRWE
Trigger: CTCCCAACGGACAAAAGGAGGGCAACAGGTACCTGGCGGGTTCCACCATCTACTTCCACTGTGACAACGGCTACAGCCTGGCCGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS-3UTR CAA 90 bp GACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGAGGCGGAGGCCAGTCTaGGGGGCCGGTAGTTGCGGC +
Preference number: 5 (lower is better)
Translates to: DLPEEFEIISLECRGRPLRRRPV*GAGSCG
Trigger: GCCGCAACTACCGGCCCCCAAGACTGGCCTCCGCCT...CAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CAA 90 bp GCAGCACTGCACTGGTGCCCGCACGGTCCGGGAGCAGGCCTCCGTAGATCAGGGAAGGAAACAAGGCGCTaGTTTTCTCTTTGCACAGGC +
Preference number: 5 (lower is better)
Translates to: AALHWCPHGPGAGLRRSGKETRR*FSLCTG
Trigger: GCCTGTGCAAAGAGAAAACAAGCGCCTTGTTTCCTT...CCCTGATCTACGGAGGCCTGCTCCCGGACCGTGCGGGCACCAGTGCAGTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS CCA 90 bp TCTCTGCCCCGGCCAGGCTGTAGCCGTTGTCACAGTGGAAGTAGATaGTGGAACCCGCCAGGTACCTGTTGCCCTCCTTTTGTCCGTTGG +
Preference number: 5 (lower is better)
Translates to: SLPRPGCSRCHSGSR*WNPPGTCCPPFVRW
Trigger: CCAACGGACAAAAGGAGGGCAACAGGTACCTGGCGGGTTCCACCATCTACTTCCACTGTGACAACGGCTACAGCCTGGCCGGGGCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CCA 90 bp CATGATGGAGACCCTGTCCCCGGCAGCCACCGACAGGAACATTCCTaGGCTCAAGGGGGATGCATTAGGGTCACCCGCTGTGAGCATCTT +
Preference number: 5 (lower is better)
Translates to: HDGDPVPGSHRQEHS*AQGGCIRVTRCEHL
Trigger: AAGATGCTCACAGCGGGTGACCCTAATGCATCCCCCTTGAGCCCAGGAATGTTCCTGTCGGTGGCTGCCGGGGACAGGGTCTCCATCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS TCA 90 bp CCCGTGCTCAGGCTCCCAGTGGCTGCCACATCAAAGTTGCAGAAATaGTCGTCCCCACATAGTTTGGCTGCCTCTTGTGCCAGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: PVLRLPVAATSKLQK*SSPHSLAASCARLG
Trigger: CCCCAGCCTGGCACAAGAGGCAGCCAAACTATGTGGGGACGATCATTTCTGCAACTTTGATGTGGCAGCCACTGGGAGCCTGAGCACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS-3UTR CAA 90 bp CTGAGTGACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGGCCAGTGCGTGGTCGTaGGTCCAGAGCGCCTGCACG +
Preference number: 5 (lower is better)
Translates to: LSDLPEEFEIISLECRGRASAWS*VQSACT
Trigger: CGTGCAGGCGCTCTGGACCAACGACCACGCACTGGC...CCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTCACTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CAA 90 bp GACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCCTCTGCACGGGGCTTGGGTGTaGGAACACTGGGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: DLPEEFEIISLECRGRPLHGAWV*EHWASC
Trigger: GCAGGAGGCCCAGTGTTCCAACACCCAAGCCCCGTG...CAGAGGCCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CAA 90 bp CTGAGTGACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGATTGGAGGGCCGCCGTaGCATGTAGCGGGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: LSDLPEEFEIISLECRGRIGGPP*HVAGAV
Trigger: GACTGCCCCCGCTACATGCAACGGCGGCCCTCCAAT...CCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTCACTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CAA 90 bp AGGAAACAAGGCGCTTGTTTTCTCTTTGCACAGGCAGGGAGGGTGTTCCTGAGTTCGTCGGTGGGGTCGTaGTTGAGTGTCCCGAGGAGG +
Preference number: 5 (lower is better)
Translates to: RKQGACFLFAQAGRVFLSSSVGS*LSVPRR
Trigger: CCTCCTCGGGACACTCAACAACGACCCCACCGACGA...ACTCAGGAACACCCTCCCTGCCTGTGCAAAGAGAAAACAAGCGCCTTGTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CAA 90 bp CTGAGTGACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGAGCAGGGAGGACGCATaGTGCACGGTCCAGTTGGCC +
Preference number: 5 (lower is better)
Translates to: LSDLPEEFEIISLECRGRSREDA*CTVQLA
Trigger: GGCCAACTGGACCGTGCACAATGCGTCCTCCCTGCT...CCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTCACTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CAA 90 bp CTGAGTGACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGCTGCTAGCACGGGGCTaGGGTGTTGGAACACTGGGC +
Preference number: 5 (lower is better)
Translates to: LSDLPEEFEIISLECRGRLLARG*GVGTLG
Trigger: GCCCAGTGTTCCAACACCCAAGCCCCGTGCTAGCAG...CCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTCACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CAA 90 bp AGGAAACAAGGCGCTTGTTTTCTCTTTGCACAGGCAGGGAGGGTGTTCCTGAGTGTCTCGCTGTCTGCTTaGGGGTTCTGGGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: RKQGACFLFAQAGRVFLSVSLSA*GFWGLS
Trigger: GGAGAGGCCCCAGAACCCCAAAGCAGACAGCGAGAC...ACTCAGGAACACCCTCCCTGCCTGTGCAAAGAGAAAACAAGCGCCTTGTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS TCA 90 bp TCCTCACCCATCCCAACCAGGAATCCTTTCATTGACTCAGTTCCCTaGGGCAAGGGGTTCAGATGTGGAGCTACCACTTGCCAGGGGCAT +
Preference number: 5 (lower is better)
Translates to: SSPIPTRNPFIDSVP*GKGFRCGATTCQGH
Trigger: ATGCCCCTGGCAAGTGGTAGCTCCACATCTGAACCCCTTGCCTCAGGGAACTGAGTCAATGAAAGGATTCCTGGTTGGGATGGGTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS-3UTR CAA 90 bp CTGAGTGACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGTTGTGCACGGTCCAGTaGGCCCCAAACAGGAACAGC +
Preference number: 5 (lower is better)
Translates to: LSDLPEEFEIISLECRGRLCTVQ*APNRNS
Trigger: GCTGTTCCTGTTTGGGGCCAACTGGACCGTGCACAA...CCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTCACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CAA 90 bp CTGAGTGACCTTCCAGAAGAGTTCGAAATTATAAGCCTGGAGTGCCGAGGGAGGGGGGTCGTGCTTGGGTaGGTACAGGAAGTTGTGGAC +
Preference number: 5 (lower is better)
Translates to: LSDLPEEFEIISLECRGRGVVLG*VQEVVD
Trigger: GTCCACAACTTCCTGTACCAACCCAAGCACGACCCC...CCTCCCTCGGCACTCCAGGCTTATAATTTCGAACTCTTCTGGAAGGTCACTCAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CAA 90 bp GGGAGTGTCAGGGCTCAGGACATAGGTATTAGAATCCCAGGGTATGAAGTTTCACCTGTTGCCCTCCTTTaGTCCGTTGGGAGGTGGGGC +
Preference number: 5 (lower is better)
Translates to: GSVRAQDIGIRIPGYEVSPVALL*SVGRWG
Trigger: GCCCCACCTCCCAACGGACAAAAGGAGGGCAACAGG...TGAAACTTCATACCCTGGGATTCTAATACCTATGTCCTGAGCCCTGACACTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CAA 90 bp GGGAGTGTCAGGGCTCAGGACATAGGTATTAGAATCCCAGGGTATGAAGTTTCATCCACCACATCTGAGTaGCCCTCCTGGACGGCCACT +
Preference number: 5 (lower is better)
Translates to: GSVRAQDIGIRIPGYEVSSTTSE*PSWTAT
Trigger: AGTGGCCGTCCAGGAGGGCAACTCAGATGTGGTGGA...TGAAACTTCATACCCTGGGATTCTAATACCTATGTCCTGAGCCCTGACACTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CAA 90 bp GGGAGTGTCAGGGCTCAGGACATAGGTATTAGAATCCCAGGGTATGAAGTTTCAAAGGTGGGGTCGTGCTaGGGTTGGTACAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: GSVRAQDIGIRIPGYEVSKVGSC*GWYRKL
Trigger: CAACTTCCTGTACCAACCCAAGCACGACCCCACCTT...TGAAACTTCATACCCTGGGATTCTAATACCTATGTCCTGAGCCCTGACACTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS-3UTR CAA 90 bp GGGAGTGTCAGGGCTCAGGACATAGGTATTAGAATCCCAGGGTATGAAGTTTCAGGTTGGTACAGGAAGTaGTGGACCAGGAACCAGGAA +
Preference number: 5 (lower is better)
Translates to: GSVRAQDIGIRIPGYEVSGWYRK*WTRNQE
Trigger: TTCCTGGTTCCTGGTCCACAACTTCCTGTACCAACC...TGAAACTTCATACCCTGGGATTCTAATACCTATGTCCTGAGCCCTGACACTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS GCA 72 bp GGGGTGCGCCCCAGTCATGGCCGCGGTCGGGAGTGCTaGCGCCGCTGGAGTCAGCTGTCAGGAGCTGCGTCC +
Preference number: 6 (lower is better)
Translates to: GVRPSHGRGREC*RRWSQLSGAAS
Trigger: GGACGCAGCTCCTGACAGCTGACTCCAGCGGCGGCAGCACTCCCGACCGCGGCCATGACTGGGGCGCACCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 72 bp ACGGGGGTGCGCCCCAGTCATGGCCGCGGTCGGGAGTaGTGCCGCCGCTGGAGTCAGCTGTCAGGAGCTGCG +
Preference number: 6 (lower is better)
Translates to: TGVRPSHGRGRE*CRRWSQLSGAA
Trigger: CGCAGCTCCTGACAGCTGACTCCAGCGGCGGCAGCACTCCCGACCGCGGCCATGACTGGGGCGCACCCCCGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS TCA 72 bp GAACGGGCCCTGCACGCTGACCTCCAGGCCGGCCCCTaGTGCCAGCATGATGGAGACCCTGTCCCCGGCAGC +
Preference number: 6 (lower is better)
Translates to: ERALHADLQAGP*CQHDGDPVPGS
Trigger: GCTGCCGGGGACAGGGTCTCCATCATGCTGGCATCAGGGGCCGGCCTGGAGGTCAGCGTGCAGGGCCCGTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS TCA 72 bp GCGCAACCGCCGCCACCACCGCGAGGCCCCCAAAGATaGTGCCCAACAGCACCGCGTAGCTGCGTCCTGGCT +
Preference number: 6 (lower is better)
Translates to: AQPPPPPRGPQR*CPTAPRSCVLA
Trigger: AGCCAGGACGCAGCTACGCGGTGCTGTTGGGCATCATCTTTGGGGGCCTCGCGGTGGTGGCGGCGGTTGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 72 bp AGTTGCCCTCCTGGACGGCCACTGCGGTCAGCCCAGTaGCACGGGTCTCCGTGCCGTTGGACATCGTCCCGG +
Preference number: 6 (lower is better)
Translates to: SCPPGRPLRSAQ*HGSPCRWTSSR
Trigger: CCGGGACGATGTCCAACGGCACGGAGACCCGTGGCACTGGGCTGACCGCAGTGGCCGTCCAGGAGGGCAACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 72 bp TCAGGCAGCAGGACGGACACACTCAGGAACGGGCCCTaGACGCTGACCTCCAGGCCGGCCCCTGATGCCAGC +
Preference number: 6 (lower is better)
Translates to: SGSRTDTLRNGP*TLTSRPAPDAS
Trigger: GCTGGCATCAGGGGCCGGCCTGGAGGTCAGCGTGCAGGGCCCGTTCCTGAGTGTGTCCGTCCTGCTGCCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 72 bp GCCAGCCACAGGACACCACTGGCTGCAGGCTCTGCATaGGACGCTGGTGCAGCTGGTGGGCCACCCGAGTGG +
Preference number: 6 (lower is better)
Translates to: ASHRTPLAAGSA*DAGAAGGPPEW
Trigger: CCACTCGGGTGGCCCACCAGCTGCACCAGCGTCGCATGCAGAGCCTGCAGCCAGTGGTGTCCTGTGGCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 72 bp GGGTGGGTGAGGACCAGGTGCCGTCAGCCTGGCAGGTaGTGGTCTCTGCCCCGGCCAGGCTGTAGCCGTTGT +
Preference number: 6 (lower is better)
Translates to: GWVRTRCRQPGR*WSLPRPGCSRC
Trigger: ACAACGGCTACAGCCTGGCCGGGGCAGAGACCAGCACCTGCCAGGCTGACGGCACCTGGTCCTCACCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CAA 72 bp GGGCCGGTAGTTGCGGCAGTCATTGGAGGGCCGCCGTaGCATGTAGCGGGGGCAGTCGGGTGCCCAGAGGCA +
Preference number: 6 (lower is better)
Translates to: GPVVAAVIGGPP*HVAGAVGCPEA
Trigger: TGCCTCTGGGCACCCGACTGCCCCCGCTACATGCAACGGCGGCCCTCCAATGACTGCCGCAACTACCGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 72 bp GACGCTGGTGCAGCTGGTGGGCCACCCGAGTGGCAGTaGCCGTGCTCAGGCTCCCAGTGGCTGCCACATCAA +
Preference number: 6 (lower is better)
Translates to: DAGAAGGPPEWQ*PCSGSQWLPHQ
Trigger: TTGATGTGGCAGCCACTGGGAGCCTGAGCACGGGCACTGCCACTCGGGTGGCCCACCAGCTGCACCAGCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CCA 72 bp AGGCCAGTCTTGGGGGCCGGTAGTTGCGGCAGTCATTaGAGGGCCGCCGTTGCATGTAGCGGGGGCAGTCGG +
Preference number: 6 (lower is better)
Translates to: RPVLGAGSCGSH*RAAVACSGGSR
Trigger: CCGACTGCCCCCGCTACATGCAACGGCGGCCCTCCAATGACTGCCGCAACTACCGGCCCCCAAGACTGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CAA 72 bp GGGAGGACATGTCCCACCGTCACGGCCTCTCGGCTTTaGACCAGGTGGGTACGACGGGGGCACCTCGGTGGG +
Preference number: 6 (lower is better)
Translates to: GRTCPTVTASRL*TRWVRRGHLGG
Trigger: CCCACCGAGGTGCCCCCGTCGTACCCACCTGGTCAAAAGCCGAGAGGCCGTGACGGTGGGACATGTCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS TCA 72 bp CTGCGTCCCGTCCGCTGTGTAGCAGCACTGCTGACCTaGGCCGTACCGGAGGCTGGCCTGCACAGAACGCAC +
Preference number: 6 (lower is better)
Translates to: LRPVRCVAALLT*AVPEAGLHRTH
Trigger: GTGCGTTCTGTGCAGGCCAGCCTCCGGTACGGCTCAGGTCAGCAGTGCTGCTACACAGCGGACGGGACGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS TCA 72 bp GGAGGACATGTCCCACCGTCACGGCCTCTCGGCTTTTaGCCAGGTGGGTACGACGGGGGCACCTCGGTGGGT +
Preference number: 6 (lower is better)
Translates to: GGHVPPSRPLGF*PGGYDGGTSVG
Trigger: ACCCACCGAGGTGCCCCCGTCGTACCCACCTGGTCAAAAGCCGAGAGGCCGTGACGGTGGGACATGTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS GCA 72 bp CAGGCCACAGGGTCCTCTCGGAAGTCATCGCTCAGGTaGCAGGCCAGTGCGTGGTCGTTGGTCCAGAGCGCC +
Preference number: 6 (lower is better)
Translates to: QATGSSRKSSLR*QASAWSLVQSA
Trigger: GGCGCTCTGGACCAACGACCACGCACTGGCCTGGCACCTGAGCGATGACTTCCGAGAGGACCCTGTGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 72 bp CTCCGAAGGCGGAGGCCAGTCTTGGGGGCCGGTAGTTaGGGCAGTCATTGGAGGGCCGCCGTTGCATGTAGC +
Preference number: 6 (lower is better)
Translates to: LRRRRPVLGAGS*GSHWRAAVACS
Trigger: GCTACATGCAACGGCGGCCCTCCAATGACTGCCGCAACTACCGGCCCCCAAGACTGGCCTCCGCCTTCGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CCA 72 bp GCCAGCCTGACTTCCACCACATCTGAGTTGCCCTCCTaGACGGCCACTGCGGTCAGCCCAGTGCCACGGGTC +
Preference number: 6 (lower is better)
Translates to: ASLTSTTSELPS*TATAVSPVPRV
Trigger: GACCCGTGGCACTGGGCTGACCGCAGTGGCCGTCCAGGAGGGCAACTCAGATGTGGTGGAAGTCAGGCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CCA 72 bp TGTCCCACCGTCACGGCCTCTCGGCTTTTGACCAGGTaGGTACGACGGGGGCACCTCGGTGGGTGTGAAGGC +
Preference number: 6 (lower is better)
Translates to: CPTVTASRLLTR*VRRGHLGGCEG
Trigger: GCCTTCACACCCACCGAGGTGCCCCCGTCGTACCCACCTGGTCAAAAGCCGAGAGGCCGTGACGGTGGGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS CAA 72 bp CCCCATGTTGAGATGCACGTGTGGGTCCCTCTGGCCTaGGCTGCAGCAGCCACACCTGCCTGGGCACGTCCC +
Preference number: 6 (lower is better)
Translates to: PHVEMHVWVPLA*AAAATPAWARP
Trigger: GGGACGTGCCCAGGCAGGTGTGGCTGCTGCAGCCAAGGCCAGAGGGACCCACACGTGCATCTCAACATGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS CAA 90 bp AGACCTCCGGTCCTGTTGGCCAGCCTGACTTCCACCACATCTGAGTaGCCCTCCTGGACGGCCACTGCGGTCAGCCCAGTGCCACGGGTC +
Preference number: 6 (lower is better)
Translates to: RPPVLLASLTSTTSE*PSWTATAVSPVPRV
Trigger: GACCCGTGGCACTGGGCTGACCGCAGTGGCCGTCCAGGAGGGCAACTCAGATGTGGTGGAAGTCAGGCTGGCCAACAGGACCGGAGGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CAA 90 bp TCCTCCGTAGGGAGGACATGTCCCACCGTCACGGCCTCTCGGCTTTaGACCAGGTGGGTACGACGGGGGCACCTCGGTGGGTGTGAAGGC +
Preference number: 6 (lower is better)
Translates to: SSVGRTCPTVTASRL*TRWVRRGHLGGCEG
Trigger: GCCTTCACACCCACCGAGGTGCCCCCGTCGTACCCACCTGGTCAAAAGCCGAGAGGCCGTGACGGTGGGACATGTCCTCCCTACGGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS TCA 72 bp TCCGGTCCTGTTGGCCAGCCTGACTTCCACCACATCTaGGTTGCCCTCCTGGACGGCCACTGCGGTCAGCCC +
Preference number: 6 (lower is better)
Translates to: SGPVGQPDFHHI*VALLDGHCGQP
Trigger: GGGCTGACCGCAGTGGCCGTCCAGGAGGGCAACTCAGATGTGGTGGAAGTCAGGCTGGCCAACAGGACCGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 72 bp CAGAACGCACACAGTGCACGGCCCCGGGGTGGTAGGTaGACACGCTGCCCTGCTCCATGTCACAGCCGTAGT +
Preference number: 6 (lower is better)
Translates to: QNAHSARPRGGR*TRCPAPCHSRS
Trigger: ACTACGGCTGTGACATGGAGCAGGGCAGCGTGTGCACCTACCACCCCGGGGCCGTGCACTGTGTGCGTTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CCA 72 bp AGTCATCGCTCAGGTGCCAGGCCAGTGCGTGGTCGTTaGTCCAGAGCGCCTGCACGTCCTTCTGCCCTGCGT +
Preference number: 6 (lower is better)
Translates to: SHRSGARPVRGR*SRAPARPSALR
Trigger: ACGCAGGGCAGAAGGACGTGCAGGCGCTCTGGACCAACGACCACGCACTGGCCTGGCACCTGAGCGATGACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CAA 72 bp AAGTCATCGCTCAGGTGCCAGGCCAGTGCGTGGTCGTaGGTCCAGAGCGCCTGCACGTCCTTCTGCCCTGCG +
Preference number: 6 (lower is better)
Translates to: KSSLRCQASAWS*VQSACTSFCPA
Trigger: CGCAGGGCAGAAGGACGTGCAGGCGCTCTGGACCAACGACCACGCACTGGCCTGGCACCTGAGCGATGACTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CAA 90 bp CAGTCTTGGGGGCCGGTAGTTGCGGCAGTCATTGGAGGGCCGCCGTaGCATGTAGCGGGGGCAGTCGGGTGCCCAGAGGCAGCAGTAATA +
Preference number: 6 (lower is better)
Translates to: QSWGPVVAAVIGGPP*HVAGAVGCPEAAVI
Trigger: TATTACTGCTGCCTCTGGGCACCCGACTGCCCCCGCTACATGCAACGGCGGCCCTCCAATGACTGCCGCAACTACCGGCCCCCAAGACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS TCA 72 bp GCAGCACCTCCAGACCTCCGGTCCTGTTGGCCAGCCTaGCTTCCACCACATCTGAGTTGCCCTCCTGGACGG +
Preference number: 6 (lower is better)
Translates to: AAPPDLRSCWPA*LPPHLSCPPGR
Trigger: CCGTCCAGGAGGGCAACTCAGATGTGGTGGAAGTCAGGCTGGCCAACAGGACCGGAGGTCTGGAGGTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 72 bp GTCCTCTCGGAAGTCATCGCTCAGGTGCCAGGCCAGTaGGTGGTCGTTGGTCCAGAGCGCCTGCACGTCCTT +
Preference number: 6 (lower is better)
Translates to: VLSEVIAQVPGQ*VVVGPERLHVL
Trigger: AAGGACGTGCAGGCGCTCTGGACCAACGACCACGCACTGGCCTGGCACCTGAGCGATGACTTCCGAGAGGAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 72 bp GGAGGGCCGCCGTTGCATGTAGCGGGGGCAGTCGGGTaGCCAGAGGCAGCAGTAATAGAAGCTGAGGACATC +
Preference number: 6 (lower is better)
Translates to: GGPPLHVAGAVG*PEAAVIEAEDI
Trigger: GATGTCCTCAGCTTCTATTACTGCTGCCTCTGGGCACCCGACTGCCCCCGCTACATGCAACGGCGGCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 72 bp CGGTGGAACTCCCAGCGGCACCTGAGGTGCAGCCCCTaGAGTGAATCCCCCATGTTGAGATGCACGTGTGGG +
Preference number: 6 (lower is better)
Translates to: RWNSQRHLRCSP*SESPMLRCTCG
Trigger: CCCACACGTGCATCTCAACATGGGGGATTCACTGCAGGGGCTGCACCTCAGGTGCCGCTGGGAGTTCCACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS GCA 72 bp AATTCTGCTGACCATGACCCTCCGCCACCCCTGCCATaGTTGCGGTGGAACTCCCAGCGGCACCTGAGGTGC +
Preference number: 6 (lower is better)
Translates to: NSADHDPPPPLP*LRWNSQRHLRC
Trigger: GCACCTCAGGTGCCGCTGGGAGTTCCACCGCAAGCATGGCAGGGGTGGCGGAGGGTCATGGTCAGCAGAATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS CCA 72 bp TCTCGGAAGTCATCGCTCAGGTGCCAGGCCAGTGCGTaGTCGTTGGTCCAGAGCGCCTGCACGTCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: SRKSSLRCQASA*SLVQSACTSFC
Trigger: GCAGAAGGACGTGCAGGCGCTCTGGACCAACGACCACGCACTGGCCTGGCACCTGAGCGATGACTTCCGAGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CCA 72 bp AACCCGCCAGGTACCTGTTGCCCTCCTTTTGTCCGTTaGGAGGTGGGGCCAGCCAGCCACAGGACACCACTG +
Preference number: 6 (lower is better)
Translates to: NPPGTCCPPFVR*EVGPASHRTPL
Trigger: CAGTGGTGTCCTGTGGCTGGCTGGCCCCACCTCCCAACGGACAAAAGGAGGGCAACAGGTACCTGGCGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CCA 72 bp GAATCCCCCATGTTGAGATGCACGTGTGGGTCCCTCTaGCCTTGGCTGCAGCAGCCACACCTGCCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: ESPMLRCTCGSL*PWLQQPHLPGH
Trigger: GTGCCCAGGCAGGTGTGGCTGCTGCAGCCAAGGCCAGAGGGACCCACACGTGCATCTCAACATGGGGGATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS CCA 72 bp GACCCTGTCCCCGGCAGCCACCGACAGGAACATTCCTaGGCTCAAGGGGGATGCATTAGGGTCACCCGCTGT +
Preference number: 6 (lower is better)
Translates to: DPVPGSHRQEHS*AQGGCIRVTRC
Trigger: ACAGCGGGTGACCCTAATGCATCCCCCTTGAGCCCAGGAATGTTCCTGTCGGTGGCTGCCGGGGACAGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS CAA 72 bp GTCCTGTTGGCCAGCCTGACTTCCACCACATCTGAGTaGCCCTCCTGGACGGCCACTGCGGTCAGCCCAGTG +
Preference number: 6 (lower is better)
Translates to: VLLASLTSTTSE*PSWTATAVSPV
Trigger: CACTGGGCTGACCGCAGTGGCCGTCCAGGAGGGCAACTCAGATGTGGTGGAAGTCAGGCTGGCCAACAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CAA 72 bp GAACCCGCCAGGTACCTGTTGCCCTCCTTTTGTCCGTaGGGAGGTGGGGCCAGCCAGCCACAGGACACCACT +
Preference number: 6 (lower is better)
Translates to: EPARYLLPSFCP*GGGASQPQDTT
Trigger: AGTGGTGTCCTGTGGCTGGCTGGCCCCACCTCCCAACGGACAAAAGGAGGGCAACAGGTACCTGGCGGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CAA 72 bp GATGGTGGAACCCGCCAGGTACCTGTTGCCCTCCTTTaGTCCGTTGGGAGGTGGGGCCAGCCAGCCACAGGA +
Preference number: 6 (lower is better)
Translates to: DGGTRQVPVALL*SVGRWGQPATG
Trigger: TCCTGTGGCTGGCTGGCCCCACCTCCCAACGGACAAAAGGAGGGCAACAGGTACCTGGCGGGTTCCACCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CAA 90 bp GTGGAAGTAGATGGTGGAACCCGCCAGGTACCTGTTGCCCTCCTTTaGTCCGTTGGGAGGTGGGGCCAGCCAGCCACAGGACACCACTGG +
Preference number: 6 (lower is better)
Translates to: VEVDGGTRQVPVALL*SVGRWGQPATGHHW
Trigger: CCAGTGGTGTCCTGTGGCTGGCTGGCCCCACCTCCCAACGGACAAAAGGAGGGCAACAGGTACCTGGCGGGTTCCACCATCTACTTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS TCA 72 bp GAACTCCCAGCGGCACCTGAGGTGCAGCCCCTGCAGTaGATCCCCCATGTTGAGATGCACGTGTGGGTCCCT +
Preference number: 6 (lower is better)
Translates to: ELPAAPEVQPLQ*IPHVEMHVWVP
Trigger: AGGGACCCACACGTGCATCTCAACATGGGGGATTCACTGCAGGGGCTGCACCTCAGGTGCCGCTGGGAGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS GCA 72 bp TTCTCAGGAGTCTTGGCCTGGTGCTCACAGCCAAGCTaGTCCCATCAGGGCTGTGCACCCCAGACGTGCGTG +
Preference number: 6 (lower is better)
Translates to: FSGVLAWCSQPS*SHQGCAPQTCV
Trigger: CACGCACGTCTGGGGTGCACAGCCCTGATGGGAGCAGCTTGGCTGTGAGCACCAGGCCAAGACTCCTGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 72 bp AGGTGCAGCCCCTGCAGTGAATCCCCCATGTTGAGATaGACGTGTGGGTCCCTCTGGCCTTGGCTGCAGCAG +
Preference number: 6 (lower is better)
Translates to: RCSPCSESPMLR*TCGSLWPWLQQ
Trigger: CTGCTGCAGCCAAGGCCAGAGGGACCCACACGTGCATCTCAACATGGGGGATTCACTGCAGGGGCTGCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS GCA 72 bp CCATGCTTGCGGTGGAACTCCCAGCGGCACCTGAGGTaGAGCCCCTGCAGTGAATCCCCCATGTTGAGATGC +
Preference number: 6 (lower is better)
Translates to: PCLRWNSQRHLR*SPCSESPMLRC
Trigger: GCATCTCAACATGGGGGATTCACTGCAGGGGCTGCACCTCAGGTGCCGCTGGGAGTTCCACCGCAAGCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS CCA 72 bp GGGTCGTTGTTGAGTGTCCCGAGGAGGCCGTGGGTGTaGGTGAGGAACTTCTCAGGCAGCAGGACGGACACA +
Preference number: 6 (lower is better)
Translates to: GSLLSVPRRPWV*VRNFSGSRTDT
Trigger: TGTGTCCGTCCTGCTGCCTGAGAAGTTCCTCACCCACACCCACGGCCTCCTCGGGACACTCAACAACGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 72 bp AGTGGAAGTAGATGGTGGAACCCGCCAGGTACCTGTTaGCCTCCTTTTGTCCGTTGGGAGGTGGGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: SGSRWWNPPGTC*PPFVRWEVGPA
Trigger: GGCTGGCCCCACCTCCCAACGGACAAAAGGAGGGCAACAGGTACCTGGCGGGTTCCACCATCTACTTCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 72 bp TGCCCGTGCCATGTTTCCAGTAACCCCCACCCCGTCTaGCCCATATACTCCACGGTCACTCACAGTTGGCCC +
Preference number: 6 (lower is better)
Translates to: CPCHVSSNPHPV*PIYSTVTHSWP
Trigger: GGGCCAACTGTGAGTGACCGTGGAGTATATGGGGCAGACGGGGTGGGGGTTACTGGAAACATGGCACGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS TCA 72 bp GGCAGTCGGGTGCCCAGAGGCAGCAGTAATAGAAGCTaGGGACATCGTAGAGCCAGTGGGACATGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: GSRVPRGSSNRS*GHRRASGTCWA
Trigger: TGCCCAGCATGTCCCACTGGCTCTACGATGTCCTCAGCTTCTATTACTGCTGCCTCTGGGCACCCGACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 72 bp AGCCACCGACAGGAACATTCCTGGGCTCAAGGGGGATaGATTAGGGTCACCCGCTGTGAGCATCTTGTCCCC +
Preference number: 6 (lower is better)
Translates to: SHRQEHSWAQGG*IRVTRCEHLVP
Trigger: GGGGACAAGATGCTCACAGCGGGTGACCCTAATGCATCCCCCTTGAGCCCAGGAATGTTCCTGTCGGTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS CCA 72 bp GGGAAGAGGGGCTCGAAGGTGGGGTCGTGCTTGGGTTaGTACAGGAAGTTGTGGACCAGGAACCAGGAATCG +
Preference number: 6 (lower is better)
Translates to: GKRGSKVGSCLG*YRKLWTRNQES
Trigger: CGATTCCTGGTTCCTGGTCCACAACTTCCTGTACCAACCCAAGCACGACCCCACCTTCGAGCCCCTCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CAA 72 bp TCCCTGAGGCAAGGGGTTCAGATGTGGAGCTACCACTaGCCAGGGGCATCCTTAACCGTGCAGGGCTGGAGA +
Preference number: 6 (lower is better)
Translates to: SLRQGVQMWSYH*PGASLTVQGWR
Trigger: TCTCCAGCCCTGCACGGTTAAGGATGCCCCTGGCAAGTGGTAGCTCCACATCTGAACCCCTTGCCTCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS CAA 90 bp AGGGGCATCCTTAACCGTGCAGGGCTGGAGACCTTGCAGTGGCTTTaGAGGACTGAGGGAGTGACAGGAGCACAGGAGTGGCTCTGTGCA +
Preference number: 6 (lower is better)
Translates to: RGILNRAGLETLQWL*RTEGVTGAQEWLCA
Trigger: TGCACAGAGCCACTCCTGTGCTCCTGTCACTCCCTCAGTCCTCAAAAGCCACTGCAAGGTCTCCAGCCCTGCACGGTTAAGGATGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS CAA 90 bp CTACCACTTGCCAGGGGCATCCTTAACCGTGCAGGGCTGGAGACCTaGCAGTGGCTTTTGAGGACTGAGGGAGTGACAGGAGCACAGGAG +
Preference number: 6 (lower is better)
Translates to: LPLARGILNRAGLET*QWLLRTEGVTGAQE
Trigger: CTCCTGTGCTCCTGTCACTCCCTCAGTCCTCAAAAGCCACTGCAAGGTCTCCAGCCCTGCACGGTTAAGGATGCCCCTGGCAAGTGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463101.1
CDS CCA 72 bp CGGCCAGGCTGTAGCCGTTGTCACAGTGGAAGTAGATaGTGGAACCCGCCAGGTACCTGTTGCCCTCCTTTT +
Preference number: 6 (lower is better)
Translates to: RPGCSRCHSGSR*WNPPGTCCPPF
Trigger: AAAAGGAGGGCAACAGGTACCTGGCGGGTTCCACCATCTACTTCCACTGTGACAACGGCTACAGCCTGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS CAA 72 bp AGCGCTGCCTCCAGCAGCACGTACTCTCCGCGCCCATaGAATGTGAAGTTGGTGCCGTCGAAGGTCACAAAG +
Preference number: 6 (lower is better)
Translates to: SAASSSTYSPRP*NVKLVPSKVTK
Trigger: CTTTGTGACCTTCGACGGCACCAACTTCACATTCAATGGGCGCGGAGAGTACGTGCTGCTGGAGGCAGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS GCA 72 bp ACCGACAGGAACATTCCTTTCAGGTCCATCCAGCTCTaGTCGGTGAAGCTCAGCACCTCCTGGTTCAGCAGC +
Preference number: 6 (lower is better)
Translates to: TDRNIPFRSIQL*SVKLSTSWFSS
Trigger: GCTGCTGAACCAGGAGGTGCTGAGCTTCACCGAGCAGAGCTGGATGGACCTGAAAGGAATGTTCCTGTCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358321.4
CDS CCA 72 bp CCAGGCTGTAGCCGTTGTCACAGTGGAAGTAGATGGTaGAACCCGCCAGGTACCTGTTGCCCTCCTTTTGTC +
Preference number: 6 (lower is better)
Translates to: PGCSRCHSGSRW*NPPGTCCPPFV
Trigger: GACAAAAGGAGGGCAACAGGTACCTGGCGGGTTCCACCATCTACTTCCACTGTGACAACGGCTACAGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358321.4
ENST00000463101.1
CDS TCA 72 bp ATCCCAACCAGGAATCCTTTCATTGACTCAGTTCCCTaGGGCAAGGGGTTCAGATGTGGAGCTACCACTTGC +
Preference number: 6 (lower is better)
Translates to: IPTRNPFIDSVP*GKGFRCGATTC
Trigger: GCAAGTGGTAGCTCCACATCTGAACCCCTTGCCTCAGGGAACTGAGTCAATGAAAGGATTCCTGGTTGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463101.1