Pregenerated sensors for SUPV3L1 (Homo sapiens)
Ensembl gene IDs: ENSG00000156502Ensembl transcript IDs: ENST00000359655.9, ENST00000422378.1, ENST00000471069.5, ENST00000478227.5, ENST00000483572.5, ENST00000486661.1, ENST00000497254.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGTCCAGAGGCCGGGTTAGCTCGGCCCCGACGTCGCCGTCGGCGCTaGGGCCCTGAGGTTTCACAGTCAGGGGCACGAACAAGGACGTGT | + |
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Preference number: 5 (lower is better) Translates to: CPEAGLARPRRRRRR*GPEVSQSGARTRTC Trigger: ACACGTCCTTGTTCGTGCCCCTGACTGTGAAACCTCAGGGCCCCAGCGCCGACGGCGACGTCGGGGCCGAGCTAACCCGGCCTCTGGACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000359655.9 ENST00000422378.1 ENST00000471069.5 ENST00000483572.5 |
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| CDS CCA 90 bp | GTAGCTTTACTCCCTAGAGCTTTGGTGCCGCGTGTCCTTCTAGCTTaGCTCTTTAAGGTTCCTGACAATCGTGACTGGCTCCCTGATGGA | + |
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Preference number: 5 (lower is better) Translates to: VALLPRALVPRVLLA*LFKVPDNRDWLPDG Trigger: TCCATCAGGGAGCCAGTCACGATTGTCAGGAACCTTAAAGAGCCAAGCTAGAAGGACACGCGGCACCAAAGCTCTAGGGAGTAAAGCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359655.9 ENST00000497254.1 |
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| CDS TCA 90 bp | ATAAGCTCCATCACCAGGTCAATAGCAGCAGGTTCTCCACACAAATaGACCTCTTCAGCACACAGTCCTAGAAGTGCTCTGGTCCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: ISSITRSIAAGSPHK*TSSAHSPRSALVQA Trigger: GGCCTGGACCAGAGCACTTCTAGGACTGTGTGCTGAAGAGGTTCATTTGTGTGGAGAACCTGCTGCTATTGACCTGGTGATGGAGCTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000359655.9 ENST00000422378.1 ENST00000478227.5 |
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| CDS TCA 90 bp | GTTGTGTCATCCACTCTTTTTCTAGCTGTTTCAGCATGTCTGGAGTaGGGAGTCCTTGCTGCACCAATCTGGAAGCAAGGGACAGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: VVSSTLFLAVSACLE*GVLAAPIWKQGTAL Trigger: GAGAGCTGTCCCTTGCTTCCAGATTGGTGCAGCAAGGACTCCTCACTCCAGACATGCTGAAACAGCTAGAAAAAGAGTGGATGACACAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000359655.9 ENST00000497254.1 |
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| CDS CCA 90 bp | CGTGTCCTTCTAGCTTGGCTCTTTAAGGTTCCTGACAATCGTGACTaGCTCCCTGATGGAAAGCCCTCCAAATTCAACAGCTTATGCGTC | + |
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Preference number: 5 (lower is better) Translates to: RVLLAWLFKVPDNRD*LPDGKPSKFNSLCV Trigger: GACGCATAAGCTGTTGAATTTGGAGGGCTTTCCATCAGGGAGCCAGTCACGATTGTCAGGAACCTTAAAGAGCCAAGCTAGAAGGACACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359655.9 ENST00000497254.1 |
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| CDS TCA 90 bp | ATCTCAACTGTACAAGAAACATGTGAAGCCTGTTTCCCATTTGGCTaGACTGTCACACGCTCTTCACCTGTCACCAAGTCACATGGCACA | + |
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Preference number: 5 (lower is better) Translates to: ISTVQETCEACFPFG*TVTRSSPVTKSHGT Trigger: TGTGCCATGTGACTTGGTGACAGGTGAAGAGCGTGTGACAGTTCAGCCAAATGGGAAACAGGCTTCACATGTTTCTTGTACAGTTGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000359655.9 ENST00000471069.5 ENST00000478227.5 ENST00000483572.5 ENST00000486661.1 |
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| CDS TCA 90 bp | GAGATCTTCATGATTCATTGTTGTAACCTCTCCTTCTTTAAACCGTaGGCTGAATCTGCCAGCTCTGCCAGCAATCTGCAGGGCTTGAGA | + |
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Preference number: 5 (lower is better) Translates to: EIFMIHCCNLSFFKP*AESASSASNLQGLR Trigger: TCTCAAGCCCTGCAGATTGCTGGCAGAGCTGGCAGATTCAGCTCACGGTTTAAAGAAGGAGAGGTTACAACAATGAATCATGAAGATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359655.9 |
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| CDS TCA 90 bp | ACAAGGAGTTGTAACACTGCACATCTCAACTGTACAAGAAACATGTaGAGCCTGTTTCCCATTTGGCTGAACTGTCACACGCTCTTCACC | + |
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Preference number: 5 (lower is better) Translates to: TRSCNTAHLNCTRNM*SLFPIWLNCHTLFT Trigger: GGTGAAGAGCGTGTGACAGTTCAGCCAAATGGGAAACAGGCTTCACATGTTTCTTGTACAGTTGAGATGTGCAGTGTTACAACTCCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471069.5 |
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| CDS GCA 90 bp | CTATACTGCCTGGCAAACTGTAACAGTGAAGAACACACAAAAGGCTaGTTCTTGTTGATAGGAGCTGTGCAGAAAACATACCTCACTCGC | + |
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Preference number: 5 (lower is better) Translates to: LYCLANCNSEEHTKG*FLLIGAVQKTYLTR Trigger: GCGAGTGAGGTATGTTTTCTGCACAGCTCCTATCAACAAGAAGCAGCCTTTTGTGTGTTCTTCACTGTTACAGTTTGCCAGGCAGTATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359655.9 |
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| CDS TCA 90 bp | GTATTTCTGGATTGCGTGATAAGTCTTTCCACTGTTTGTGGGGCCTaGATGAAATATTATCTTCCGCTGCATGGCTCTAGCATCTGGGTA | + |
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Preference number: 5 (lower is better) Translates to: VFLDCVISLSTVCGA*MKYYLPLHGSSIWV Trigger: TACCCAGATGCTAGAGCCATGCAGCGGAAGATAATATTTCATTCAGGCCCCACAAACAGTGGAAAGACTTATCACGCAATCCAGAAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000359655.9 ENST00000471069.5 ENST00000478227.5 ENST00000483572.5 ENST00000486661.1 |
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| CDS TCA 90 bp | ATAAGGAGTTGTAACACTGCACATCTCAACTGTACAAGAAACATGTaGAGCCTGTTTCCCATTTGGCTGAACTGTCACACGCTCTTCACC | + |
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Preference number: 5 (lower is better) Translates to: IRSCNTAHLNCTRNM*SLFPIWLNCHTLFT Trigger: GGTGAAGAGCGTGTGACAGTTCAGCCAAATGGGAAACAGGCTTCACATGTTTCTTGTACAGTTGAGATGTGCAGTGTTACAACTCCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000359655.9 ENST00000478227.5 ENST00000483572.5 ENST00000486661.1 |
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| CDS CCA 90 bp | GTGATATTGTGCACACCATCTTGGATAATACCATCTAGTTCTTTCTaGAGATCTCGAATAAGGCTGGCATCTGGAAACATATCCATAAAT | + |
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Preference number: 5 (lower is better) Translates to: VILCTPSWIIPSSSF*RSRIRLASGNISIN Trigger: ATTTATGGATATGTTTCCAGATGCCAGCCTTATTCGAGATCTCCAGAAAGAACTAGATGGTATTATCCAAGATGGTGTGCACAATATCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359655.9 ENST00000497254.1 |
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| CDS CCA 90 bp | GTCTCAGACATTTTAATCAATTTAGTGATATTGTGCACACCATCTTaGATAATACCATCTAGTTCTTTCTGGAGATCTCGAATAAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: VSDILINLVILCTPS*IIPSSSFWRSRIRL Trigger: CAGCCTTATTCGAGATCTCCAGAAAGAACTAGATGGTATTATCCAAGATGGTGTGCACAATATCACTAAATTGATTAAAATGTCTGAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359655.9 ENST00000497254.1 |
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| CDS GCA 90 bp | AACAGCTTATGCGTCTCAGACATTTTAATCAATTTAGTGATATTGTaGACACCATCTTGGATAATACCATCTAGTTCTTTCTGGAGATCT | + |
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Preference number: 5 (lower is better) Translates to: NSLCVSDILINLVIL*TPSWIIPSSSFWRS Trigger: AGATCTCCAGAAAGAACTAGATGGTATTATCCAAGATGGTGTGCACAATATCACTAAATTGATTAAAATGTCTGAGACGCATAAGCTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359655.9 ENST00000497254.1 |
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| CDS CCA 72 bp | GCCGGGTTAGCTCGGCCCCGACGTCGCCGTCGGCGCTaGGGCCCTGAGGTTTCACAGTCAGGGGCACGAACA | + |
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Preference number: 6 (lower is better) Translates to: AGLARPRRRRRR*GPEVSQSGART Trigger: TGTTCGTGCCCCTGACTGTGAAACCTCAGGGCCCCAGCGCCGACGGCGACGTCGGGGCCGAGCTAACCCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000359655.9 ENST00000422378.1 ENST00000471069.5 ENST00000483572.5 |
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| CDS CAA 72 bp | ACAGTCAGGGGCACGAACAAGGACGTGTTTGGTATTTaGGAGCCACCGGAGGCAGAGGAGGAGGCGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: TVRGTNKDVFGI*EPPEAEEEAVA Trigger: TGCCACCGCCTCCTCCTCTGCCTCCGGTGGCTCCAAAATACCAAACACGTCCTTGTTCGTGCCCCTGACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000359655.9 ENST00000422378.1 ENST00000471069.5 ENST00000483572.5 |
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| CDS GCA 72 bp | TTGCTGCACCAATCTGGAAGCAAGGGACAGCTCTCCTaGATCGGGGCTGGGTGGCTCAGTAGCTTTACTCCC | + |
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Preference number: 6 (lower is better) Translates to: LLHQSGSKGQLS*IGAGWLSSFTP Trigger: GGGAGTAAAGCTACTGAGCCACCCAGCCCCGATGCAGGAGAGCTGTCCCTTGCTTCCAGATTGGTGCAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359655.9 ENST00000497254.1 |
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| CDS CAA 90 bp | CCTGCATCGGGGCTGGGTGGCTCAGTAGCTTTACTCCCTAGAGCTTaGGTGCCGCGTGTCCTTCTAGCTTGGCTCTTTAAGGTTCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: PASGLGGSVALLPRA*VPRVLLAWLFKVPD Trigger: GTCAGGAACCTTAAAGAGCCAAGCTAGAAGGACACGCGGCACCAAAGCTCTAGGGAGTAAAGCTACTGAGCCACCCAGCCCCGATGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359655.9 ENST00000497254.1 |
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| CDS CCA 72 bp | AGGTTTCACAGTCAGGGGCACGAACAAGGACGTGTTTaGTATTTTGGAGCCACCGGAGGCAGAGGAGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: RFHSQGHEQGRV*YFGATGGRGGG Trigger: GCCTCCTCCTCTGCCTCCGGTGGCTCCAAAATACCAAACACGTCCTTGTTCGTGCCCCTGACTGTGAAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000359655.9 ENST00000422378.1 ENST00000471069.5 ENST00000483572.5 |
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| CDS CAA 72 bp | GAGGTTTCACAGTCAGGGGCACGAACAAGGACGTGTTaGGTATTTTGGAGCCACCGGAGGCAGAGGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: EVSQSGARTRTC*VFWSHRRQRRR Trigger: CCTCCTCCTCTGCCTCCGGTGGCTCCAAAATACCAAACACGTCCTTGTTCGTGCCCCTGACTGTGAAACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000359655.9 ENST00000422378.1 ENST00000471069.5 ENST00000483572.5 |
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| CDS CAA 72 bp | GGGCTGGGTGGCTCAGTAGCTTTACTCCCTAGAGCTTaGGTGCCGCGTGTCCTTCTAGCTTGGCTCTTTAAG | + |
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Preference number: 6 (lower is better) Translates to: GLGGSVALLPRA*VPRVLLAWLFK Trigger: CTTAAAGAGCCAAGCTAGAAGGACACGCGGCACCAAAGCTCTAGGGAGTAAAGCTACTGAGCCACCCAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359655.9 ENST00000497254.1 |
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| CDS CCA 72 bp | CTCCCTAGAGCTTTGGTGCCGCGTGTCCTTCTAGCTTaGCTCTTTAAGGTTCCTGACAATCGTGACTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LPRALVPRVLLA*LFKVPDNRDWL Trigger: GAGCCAGTCACGATTGTCAGGAACCTTAAAGAGCCAAGCTAGAAGGACACGCGGCACCAAAGCTCTAGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359655.9 ENST00000497254.1 |
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| CDS GCA 72 bp | TCTAGCTGTTTCAGCATGTCTGGAGTGAGGAGTCCTTaGTGCACCAATCTGGAAGCAAGGGACAGCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SSCFSMSGVRSP*CTNLEARDSSP Trigger: AGGAGAGCTGTCCCTTGCTTCCAGATTGGTGCAGCAAGGACTCCTCACTCCAGACATGCTGAAACAGCTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359655.9 ENST00000497254.1 |
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| CDS TCA 72 bp | TCCACTCTTTTTCTAGCTGTTTCAGCATGTCTGGAGTaGGGAGTCCTTGCTGCACCAATCTGGAAGCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: STLFLAVSACLE*GVLAAPIWKQG Trigger: CCCTTGCTTCCAGATTGGTGCAGCAAGGACTCCTCACTCCAGACATGCTGAAACAGCTAGAAAAAGAGTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000359655.9 ENST00000497254.1 |
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| CDS CCA 72 bp | CTAGCTTGGCTCTTTAAGGTTCCTGACAATCGTGACTaGCTCCCTGATGGAAAGCCCTCCAAATTCAACAGC | + |
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Preference number: 6 (lower is better) Translates to: LAWLFKVPDNRD*LPDGKPSKFNS Trigger: GCTGTTGAATTTGGAGGGCTTTCCATCAGGGAGCCAGTCACGATTGTCAGGAACCTTAAAGAGCCAAGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359655.9 ENST00000497254.1 |
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| CDS TCA 72 bp | ATCACCAGGTCAATAGCAGCAGGTTCTCCACACAAATaGACCTCTTCAGCACACAGTCCTAGAAGTGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: ITRSIAAGSPHK*TSSAHSPRSAL Trigger: CAGAGCACTTCTAGGACTGTGTGCTGAAGAGGTTCATTTGTGTGGAGAACCTGCTGCTATTGACCTGGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000359655.9 ENST00000422378.1 ENST00000478227.5 |
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| CDS TCA 72 bp | GTACAAGAAACATGTGAAGCCTGTTTCCCATTTGGCTaGACTGTCACACGCTCTTCACCTGTCACCAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: VQETCEACFPFG*TVTRSSPVTKS Trigger: TGACTTGGTGACAGGTGAAGAGCGTGTGACAGTTCAGCCAAATGGGAAACAGGCTTCACATGTTTCTTGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000359655.9 ENST00000471069.5 ENST00000478227.5 ENST00000483572.5 ENST00000486661.1 |
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| CDS CAA 90 bp | TGCCTGGCAAACTGTAACAGTGAAGAACACACAAAAGGCTGCTTCTaGTTGATAGGAGCTGTGCAGAAAACATACCTCACTCGCAGACTT | + |
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Preference number: 6 (lower is better) Translates to: CLANCNSEEHTKGCF*LIGAVQKTYLTRRL Trigger: AAGTCTGCGAGTGAGGTATGTTTTCTGCACAGCTCCTATCAACAAGAAGCAGCCTTTTGTGTGTTCTTCACTGTTACAGTTTGCCAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359655.9 |
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| CDS TCA 72 bp | GATTGCGTGATAAGTCTTTCCACTGTTTGTGGGGCCTaGATGAAATATTATCTTCCGCTGCATGGCTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: DCVISLSTVCGA*MKYYLPLHGSS Trigger: GCTAGAGCCATGCAGCGGAAGATAATATTTCATTCAGGCCCCACAAACAGTGGAAAGACTTATCACGCAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000359655.9 ENST00000471069.5 ENST00000478227.5 ENST00000483572.5 ENST00000486661.1 |
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| CDS CCA 72 bp | AAAAGGGAAAGAACTTCAGGTGCAGGCATTTGTCAGTaGTGGCAGGATCGCACGTTTGTCATACTTATTCTC | + |
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Preference number: 6 (lower is better) Translates to: KRERTSGAGICQ*WQDRTFVILIL Trigger: GAGAATAAGTATGACAAACGTGCGATCCTGCCACCACTGACAAATGCCTGCACCTGAAGTTCTTTCCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471069.5 |
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| CDS CAA 90 bp | AGATCCATGAGGTCTTTAATATTCTTAGGTGGAAGTAAAGGCCATTaGATGTATCGGCGTAACCATGCAAAGGTCAGGGGCTCATTCCTG | + |
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Preference number: 6 (lower is better) Translates to: RSMRSLIFLGGSKGH*MYRRNHAKVRGSFL Trigger: CAGGAATGAGCCCCTGACCTTTGCATGGTTACGCCGATACATCAAATGGCCTTTACTTCCACCTAAGAATATTAAAGACCTCATGGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359655.9 ENST00000497254.1 |
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| CDS TCA 72 bp | TGTAACACTGCACATCTCAACTGTACAAGAAACATGTaGAGCCTGTTTCCCATTTGGCTGAACTGTCACACG | + |
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Preference number: 6 (lower is better) Translates to: CNTAHLNCTRNM*SLFPIWLNCHT Trigger: CGTGTGACAGTTCAGCCAAATGGGAAACAGGCTTCACATGTTTCTTGTACAGTTGAGATGTGCAGTGTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000359655.9 ENST00000471069.5 ENST00000478227.5 ENST00000483572.5 ENST00000486661.1 |
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| CDS CAA 72 bp | AGGTCTTTAATATTCTTAGGTGGAAGTAAAGGCCATTaGATGTATCGGCGTAACCATGCAAAGGTCAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: RSLIFLGGSKGH*MYRRNHAKVRG Trigger: GCCCCTGACCTTTGCATGGTTACGCCGATACATCAAATGGCCTTTACTTCCACCTAAGAATATTAAAGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359655.9 ENST00000497254.1 |
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| CDS CCA 72 bp | ATTTCTGGATTGCGTGATAAGTCTTTCCACTGTTTGTaGGGCCTGAATGAAATATTATCTTCCGCTGCATGG | + |
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Preference number: 6 (lower is better) Translates to: ISGLRDKSFHCL*GLNEILSSAAW Trigger: CCATGCAGCGGAAGATAATATTTCATTCAGGCCCCACAAACAGTGGAAAGACTTATCACGCAATCCAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000359655.9 ENST00000471069.5 ENST00000478227.5 ENST00000483572.5 ENST00000486661.1 |
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| CDS CAA 90 bp | TCTCATGTGCCAGTAATTTTAGAGGGCCACAATACACTCCAGACTTaGCTGAGAAGTATTTCTGGATTGCGTGATAAGTCTTTCCACTGT | + |
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Preference number: 6 (lower is better) Translates to: SHVPVILEGHNTLQT*LRSISGLRDKSFHC Trigger: ACAGTGGAAAGACTTATCACGCAATCCAGAAATACTTCTCAGCAAAGTCTGGAGTGTATTGTGGCCCTCTAAAATTACTGGCACATGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000359655.9 ENST00000471069.5 ENST00000478227.5 ENST00000483572.5 ENST00000486661.1 |
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| CDS CAA 72 bp | AGTATTTCTGGATTGCGTGATAAGTCTTTCCACTGTTaGTGGGGCCTGAATGAAATATTATCTTCCGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SISGLRDKSFHC*WGLNEILSSAA Trigger: TGCAGCGGAAGATAATATTTCATTCAGGCCCCACAAACAGTGGAAAGACTTATCACGCAATCCAGAAATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000359655.9 ENST00000471069.5 ENST00000478227.5 ENST00000483572.5 ENST00000486661.1 |
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| CDS CAA 72 bp | CCAGTAATTTTAGAGGGCCACAATACACTCCAGACTTaGCTGAGAAGTATTTCTGGATTGCGTGATAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: PVILEGHNTLQT*LRSISGLRDKS Trigger: AGACTTATCACGCAATCCAGAAATACTTCTCAGCAAAGTCTGGAGTGTATTGTGGCCCTCTAAAATTACTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000359655.9 ENST00000471069.5 ENST00000478227.5 ENST00000483572.5 ENST00000486661.1 |
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| CDS CAA 72 bp | AACTGTAACAGTGAAGAACACACAAAAGGCTGCTTCTaGTTGATAGGAGCTGTGCAGAAAACATACCTCACT | + |
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Preference number: 6 (lower is better) Translates to: NCNSEEHTKGCF*LIGAVQKTYLT Trigger: AGTGAGGTATGTTTTCTGCACAGCTCCTATCAACAAGAAGCAGCCTTTTGTGTGTTCTTCACTGTTACAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359655.9 |
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| CDS CAA 72 bp | AGACTGCATAATATAATTTCTAAAGCTTATGAAAGCTaGGTGGAAGAGACGAGCATCAAGTCCATAATCAGC | + |
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Preference number: 6 (lower is better) Translates to: RLHNIISKAYES*VEETSIKSIIS Trigger: GCTGATTATGGACTTGATGCTCGTCTCTTCCACCAAGCTTTCATAAGCTTTAGAAATTATATTATGCAGTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000359655.9 ENST00000471069.5 ENST00000483572.5 |
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| CDS CAA 90 bp | TTCAACAGCTTATGCGTCTCAGACATTTTAATCAATTTAGTGATATaGTGCACACCATCTTGGATAATACCATCTAGTTCTTTCTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: FNSLCVSDILINLVI*CTPSWIIPSSSFWR Trigger: TCTCCAGAAAGAACTAGATGGTATTATCCAAGATGGTGTGCACAATATCACTAAATTGATTAAAATGTCTGAGACGCATAAGCTGTTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359655.9 ENST00000497254.1 |
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| CDS TCA 72 bp | AAGTCTGGAAAATATATAGGGTTAATTAACACCTATTaGTTCCGGATAGGTGGGACTGGGAAATTATGTACA | + |
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Preference number: 6 (lower is better) Translates to: KSGKYIGLINTY*FRIGGTGKLCT Trigger: TGTACATAATTTCCCAGTCCCACCTATCCGGAATCAATAGGTGTTAATTAACCCTATATATTTTCCAGACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471069.5 |
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