Pregenerated sensors for STXBP3 (Homo sapiens)
Ensembl gene IDs: ENSG00000116266Ensembl transcript IDs: ENST00000370008.4, ENST00000469338.1, ENST00000472099.1, ENST00000483586.5, ENST00000485167.1, ENST00000486601.5
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS-3UTR GCA 90 bp | AGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCACACCATCTTCCCGACACTaGGGAGCAGCAGCCACCACC | + |
Preference number: 4 (lower is better) Translates to: SIQWVISMYIGGCEKLPTPSSRH*GAAATT Trigger: GGTGGTGGCTGCTGCTCCGCAGTGTCGGGAAGATGG...TGTGGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR CCA 90 bp | ATAGGTGGCTGTGAAAAATTACCCACAACTCTAATATATTCTCCTCCAAAGGTGGTTCATGCAGGACAGTaGACACAGGATCAAAGCCAC | + |
Preference number: 4 (lower is better) Translates to: IGGCEKLPTTLIYSPPKVVHAGQ*TQDQSH Trigger: GTGGCTTTGATCCTGTGTCCACTGTCCTGCATGAAC...CACCTTTGGAGGAGAATATATTAGAGTTGTGGGTAATTTTTCACAGCCACCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR GCA 90 bp | AGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCACACACCTTCTGTCCTTCTaGATCAGTTCCAAGTGCCAG | + |
Preference number: 4 (lower is better) Translates to: SIQWVISMYIGGCEKLPTHLLSF*ISSKCQ Trigger: CTGGCACTTGGAACTGATGCAGAAGGACAGAAGGTG...TGTGGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR TCA 90 bp | ATAGGTGGCTGTGAAAAATTACCCACAACTCTAATATATTCTCCTCCAAAGGTGGGTAAGAGCACTAAGTaGTGTCTTTCCTTCTGTTGC | + |
Preference number: 4 (lower is better) Translates to: IGGCEKLPTTLIYSPPKVGKSTK*CLSFCC Trigger: GCAACAGAAGGAAAGACATCACTTAGTGCTCTTACC...CACCTTTGGAGGAGAATATATTAGAGTTGTGGGTAATTTTTCACAGCCACCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR TCA 90 bp | AGTATGTACATAGGTGGCTGTGAAAAATTACCCACAACTCTAATATATTCTCCTGTCCACCGAGAGAGCTaGAAAGTTTCTTCTGCAGAC | + |
Preference number: 4 (lower is better) Translates to: SMYIGGCEKLPTTLIYSPVHRES*KVSSAD Trigger: GTCTGCAGAAGAAACTTTTCAGCTCTCTCGGTGGAC...AGGAGAATATATTAGAGTTGTGGGTAATTTTTCACAGCCACCTATGTACATACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR GCA 90 bp | AGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCACAGGCATCTTTTCCCTTTaGATTACCAGGGTCTGGACT | + |
Preference number: 4 (lower is better) Translates to: SIQWVISMYIGGCEKLPTGIFSL*ITRVWT Trigger: AGTCCAGACCCTGGTAATGCAAAGGGAAAAGATGCC...TGTGGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR CCA 90 bp | AGTATGTACATAGGTGGCTGTGAAAAATTACCCACAACTCTAATATATTCTCCTTTAGCTCTGGGTTTCTaGCGAGCACTTACAGCTCCT | + |
Preference number: 4 (lower is better) Translates to: SMYIGGCEKLPTTLIYSPLALGF*RALTAP Trigger: AGGAGCTGTAAGTGCTCGCCAGAAACCCAGAGCTAA...AGGAGAATATATTAGAGTTGTGGGTAATTTTTCACAGCCACCTATGTACATACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR TCA 90 bp | ATAAGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCTCATATGCCATTGCCTaGAAGGTCAGTTCATGCAGG | + |
Preference number: 4 (lower is better) Translates to: ISIQWVISMYIGGCEKLPSYAIA*KVSSCR Trigger: CCTGCATGAACTGACCTTTCAGGCAATGGCATATGA...GGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR TCA 90 bp | AGTATGTACATAGGTGGCTGTGAAAAATTACCCACAACTCTAATATATTCTCCTAACGGTTTGCCTTGTTaGGATTGGGGAACAATGGGA | + |
Preference number: 4 (lower is better) Translates to: SMYIGGCEKLPTTLIYSPNGLPC*DWGTMG Trigger: TCCCATTGTTCCCCAATCTCAACAAGGCAAACCGTT...AGGAGAATATATTAGAGTTGTGGGTAATTTTTCACAGCCACCTATGTACATACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR GCA 90 bp | AGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCACATGCATCAGTTCCAAGTaGCAGGTCCTGTTCAGTTTT | + |
Preference number: 4 (lower is better) Translates to: SIQWVISMYIGGCEKLPTCISSK*QVLFSF Trigger: AAAACTGAACAGGACCTGGCACTTGGAACTGATGCA...TGTGGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR CCA 90 bp | AGTATGTACATAGGTGGCTGTGAAAAATTACCCACAACTCTAATATATTCTCCTGAGATTGGGGAACAATaGGAACACCAAGGTAACTCC | + |
Preference number: 4 (lower is better) Translates to: SMYIGGCEKLPTTLIYSPEIGEQ*EHQGNS Trigger: GGAGTTACCTTGGTGTTCCCATTGTTCCCCAATCTC...AGGAGAATATATTAGAGTTGTGGGTAATTTTTCACAGCCACCTATGTACATACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR CCA 90 bp | AGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCACACATACTGCTGGACACTaGGAACAATATGGCCATTCT | + |
Preference number: 4 (lower is better) Translates to: SIQWVISMYIGGCEKLPTHTAGH*EQYGHS Trigger: AGAATGGCCATATTGTTCCCAGTGTCCAGCAGTATG...TGTGGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR TCA 90 bp | AGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCACAGAGCTTTCATTTGTCTaGCAGGTTCACGGTTCTTAT | + |
Preference number: 4 (lower is better) Translates to: SIQWVISMYIGGCEKLPTELSFV*QVHGSY Trigger: ATAAGAACCGTGAACCTGTCAGACAAATGAAAGCTC...TGTGGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR TCA 90 bp | AGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCACAGTACATAGGTGGCTGTaGAAAATTACCCACAACTCT | + |
Preference number: 4 (lower is better) Translates to: SIQWVISMYIGGCEKLPTVHRWL*KITHNS Trigger: AGAGTTGTGGGTAATTTTTCACAGCCACCTATGTAC...TGTGGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR CCA 90 bp | AGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCACAGCTGTGCAAGCTTACTaGCATTATCTAGAGGTTTAC | + |
Preference number: 4 (lower is better) Translates to: SIQWVISMYIGGCEKLPTAVQAY*HYLEVY Trigger: GTAAACCTCTAGATAATGCCAGTAAGCTTGCACAGC...TGTGGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR CCA 90 bp | ATAAGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCGAAGGAGTACTCGCATaGAATCTTTCACCTTCTGTC | + |
Preference number: 4 (lower is better) Translates to: ISIQWVISMYIGGCEKLPEGVLA*NLSPSV Trigger: GACAGAAGGTGAAAGATTCCATGCGAGTACTCCTTC...GGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR TCA 90 bp | ATAGGTGGCTGTGAAAAATTACCCACAACTCTAATATATTCTCCTCCAAAGGTGTTTACATCTTCTTATTaGCTTGGAGCAAGAAGCCTT | + |
Preference number: 4 (lower is better) Translates to: IGGCEKLPTTLIYSPPKVFTSSY*LGARSL Trigger: AAGGCTTCTTGCTCCAAGTCAATAAGAAGATGTAAA...CACCTTTGGAGGAGAATATATTAGAGTTGTGGGTAATTTTTCACAGCCACCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR CCA 90 bp | ATAGGTGGCTGTGAAAAATTACCCACAACTCTAATATATTCTCCTCCAAAGGTGTGCATTACCAGGGTCTaGACTATAACAGTAATAGAA | + |
Preference number: 4 (lower is better) Translates to: IGGCEKLPTTLIYSPPKVCITRV*TITVIE Trigger: TTCTATTACTGTTATAGTCCAGACCCTGGTAATGCA...CACCTTTGGAGGAGAATATATTAGAGTTGTGGGTAATTTTTCACAGCCACCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR CCA 90 bp | AGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCACACACACTGTAACTATCTaGTCAGCCATTGTTTCCATA | + |
Preference number: 4 (lower is better) Translates to: SIQWVISMYIGGCEKLPTHTVTI*SAIVSI Trigger: TATGGAAACAATGGCTGACCAGATAGTTACAGTGTG...TGTGGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR CCA 90 bp | ATAGGTGGCTGTGAAAAATTACCCACAACTCTAATATATTCTCCTCCAAAGGTGATCTTTTTCATCAGCTaGGTAAGAGCACTAAGTGAT | + |
Preference number: 4 (lower is better) Translates to: IGGCEKLPTTLIYSPPKVIFFIS*VRALSD Trigger: ATCACTTAGTGCTCTTACCCAGCTGATGAAAAAGAT...CACCTTTGGAGGAGAATATATTAGAGTTGTGGGTAATTTTTCACAGCCACCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR TCA 90 bp | AGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCACAACAATCTACAGACTTTaGTGTCGGAGTGATGAAATA | + |
Preference number: 4 (lower is better) Translates to: SIQWVISMYIGGCEKLPTTIYRL*CRSDEI Trigger: TATTTCATCACTCCGACATCAAAGTCTGTAGATTGT...TGTGGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR TCA 90 bp | ATAAGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCCAGGGCAAAAGTCAGTaGAGTAAATATATGCTGCTT | + |
Preference number: 4 (lower is better) Translates to: ISIQWVISMYIGGCEKLPQGKSQ*SKYMLL Trigger: AAGCAGCATATATTTACTTCACTGACTTTTGCCCTG...GGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR TCA 90 bp | AGTATGTACATAGGTGGCTGTGAAAAATTACCCACAACTCTAATATATTCTCCTTCAAGAGTATACACCTaGGATTCATGTGGAATGAAG | + |
Preference number: 4 (lower is better) Translates to: SMYIGGCEKLPTTLIYSPSRVYT*DSCGMK Trigger: CTTCATTCCACATGAATCTCAGGTGTATACTCTTGA...AGGAGAATATATTAGAGTTGTGGGTAATTTTTCACAGCCACCTATGTACATACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR TCA 90 bp | ATAAGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCGCACTTCAGAGTATGTaGTCCCTCCAATTACAAAAA | + |
Preference number: 4 (lower is better) Translates to: ISIQWVISMYIGGCEKLPALQSM*SLQLQK Trigger: TTTTTGTAATTGGAGGGATCACATACTCTGAAGTGC...GGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR GCA 90 bp | ATAAGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCGTCATCAAACACTGTTaGTTTTATCTTCTGCCACAC | + |
Preference number: 4 (lower is better) Translates to: ISIQWVISMYIGGCEKLPVIKHC*FYLLPH Trigger: GTGTGGCAGAAGATAAAAGCAACAGTGTTTGATGAC...GGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR GCA 90 bp | ATAAGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCGAAGATCTGTCATTTTaGAACACGATGCCAAAAGCT | + |
Preference number: 4 (lower is better) Translates to: ISIQWVISMYIGGCEKLPEDLSF*NTMPKA Trigger: AGCTTTTGGCATCGTGTTGCAAAATGACAGATCTTC...GGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR GCA 90 bp | AGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCACATTCACAGGATTTATGTaGCTGAGAAACTTCATAAGC | + |
Preference number: 4 (lower is better) Translates to: SIQWVISMYIGGCEKLPTFTGFM*LRNFIS Trigger: GCTTATGAAGTTTCTCAGGCACATAAATCCTGTGAA...TGTGGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR CCA 90 bp | ATAGGTGGCTGTGAAAAATTACCCACAACTCTAATATATTCTCCTCCAAAGGTGGTAATAGAATGCATCTaGTACATCAAGAGTATACAC | + |
Preference number: 4 (lower is better) Translates to: IGGCEKLPTTLIYSPPKVVIECI*YIKSIH Trigger: GTGTATACTCTTGATGTACCAGATGCATTCTATTAC...CACCTTTGGAGGAGAATATATTAGAGTTGTGGGTAATTTTTCACAGCCACCTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR GCA 90 bp | AGTATGTACATAGGTGGCTGTGAAAAATTACCCACAACTCTAATATATTCTCCTTTTTTCAACAAGCTGTaGAAGCTTACTGGCATTATC | + |
Preference number: 4 (lower is better) Translates to: SMYIGGCEKLPTTLIYSPFFNKL*KLTGII Trigger: GATAATGCCAGTAAGCTTGCACAGCTTGTTGAAAAA...AGGAGAATATATTAGAGTTGTGGGTAATTTTTCACAGCCACCTATGTACATACT 36% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR GCA 90 bp | AGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCACATTAAGATGGACAACTTaGTTAGTAATCTGTTTTCGG | + |
Preference number: 4 (lower is better) Translates to: SIQWVISMYIGGCEKLPTLRWTT*LVICFR Trigger: CCGAAAACAGATTACTAAGCAAGTTGTCCATCTTAA...TGTGGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR CCA 90 bp | AGTATGTACATAGGTGGCTGTGAAAAATTACCCACAACTCTAATATATTCTCCTTCTGCTAAGTTAAGATaGACAACTTGCTTAGTAATC | + |
Preference number: 4 (lower is better) Translates to: SMYIGGCEKLPTTLIYSPSAKLR*TTCLVI Trigger: GATTACTAAGCAAGTTGTCCATCTTAACTTAGCAGA...AGGAGAATATATTAGAGTTGTGGGTAATTTTTCACAGCCACCTATGTACATACT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS TCA 90 bp | GCATCCTCCATAATATCTTTGATAAAAGGTGTCCACCGAGAGAGCTaGAAAGTTTCTTCTGCAGACCGATCCTTTCTTAACGGTTTGCCT | + |
Preference number: 5 (lower is better) Translates to: ASSIISLIKGVHRES*KVSSADRSFLNGLP Trigger: AGGCAAACCGTTAAGAAAGGATCGGTCTGCAGAAGAAACTTTTCAGCTCTCTCGGTGGACACCTTTTATCAAAGATATTATGGAGGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370008.4 ENST00000472099.1 |
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CDS CCA 90 bp | CTTACTCCGGGATTTTCATCCAAGGTGGCACACACTGTAACTATCTaGTCAGCCATTGTTTCCATAATGGCATCTTTTCCCTTTGCATTA | + |
Preference number: 5 (lower is better) Translates to: LTPGFSSKVAHTVTI*SAIVSIMASFPFAL Trigger: TAATGCAAAGGGAAAAGATGCCATTATGGAAACAATGGCTGACCAGATAGTTACAGTGTGTGCCACCTTGGATGAAAATCCCGGAGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000370008.4 ENST00000485167.1 ENST00000486601.5 |
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CDS CCA 90 bp | GTAGATCATATGCCATTGCCTGAAAGGTCAGTTCATGCAGGACAGTaGACACAGGATCAAAGCCACGATCAATTATTAAGAGCTGTGAAT | + |
Preference number: 5 (lower is better) Translates to: VDHMPLPERSVHAGQ*TQDQSHDQLLRAVN Trigger: ATTCACAGCTCTTAATAATTGATCGTGGCTTTGATCCTGTGTCCACTGTCCTGCATGAACTGACCTTTCAGGCAATGGCATATGATCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370008.4 ENST00000485167.1 |
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CDS TCA 90 bp | TTGTATGTATCATTCTCAATTGGTAGTAGATCATATGCCATTGCCTaGAAGGTCAGTTCATGCAGGACAGTGGACACAGGATCAAAGCCA | + |
Preference number: 5 (lower is better) Translates to: LYVSFSIGSRSYAIA*KVSSCRTVDTGSKP Trigger: TGGCTTTGATCCTGTGTCCACTGTCCTGCATGAACTGACCTTTCAGGCAATGGCATATGATCTACTACCAATTGAGAATGATACATACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370008.4 ENST00000485167.1 |
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CDS-3UTR CAA 90 bp | AGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCACATGGCATCTTTTCCCTTaGCATTACCAGGGTCTGGAC | + |
Preference number: 5 (lower is better) Translates to: SIQWVISMYIGGCEKLPTWHLFP*HYQGLD Trigger: GTCCAGACCCTGGTAATGCAAAGGGAAAAGATGCCA...TGTGGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS TCA 90 bp | TTTTTATGCAGACACCCTCCTTCCATTTGTGGAACTAGACAAGACTaGATCATCCTTGGAACTACTGATTTCCTGAGTCAAGATCAGGAA | + |
Preference number: 5 (lower is better) Translates to: FLCRHPPSICGTRQD*IILGTTDFLSQDQE Trigger: TTCCTGATCTTGACTCAGGAAATCAGTAGTTCCAAGGATGATTCAGTCTTGTCTAGTTCCACAAATGGAAGGAGGGTGTCTGCATAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485167.1 |
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CDS-3UTR CAA 90 bp | ATAAGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCTTTGCCTTGTTGAGATaGGGGAACAATGGGAACACC | + |
Preference number: 5 (lower is better) Translates to: ISIQWVISMYIGGCEKLPFALLR*GNNGNT Trigger: GGTGTTCCCATTGTTCCCCAATCTCAACAAGGCAAA...GGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS GCA 90 bp | TTTTCCCTTTGCATTACCAGGGTCTGGACTATAACAGTAATAGAATaGATCTGGTACATCAAGAGTATACACCTGAGATTCATGTGGAAT | + |
Preference number: 5 (lower is better) Translates to: FSLCITRVWTITVIE*IWYIKSIHLRFMWN Trigger: ATTCCACATGAATCTCAGGTGTATACTCTTGATGTACCAGATGCATTCTATTACTGTTATAGTCCAGACCCTGGTAATGCAAAGGGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370008.4 ENST00000485167.1 ENST00000486601.5 |
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CDS CCA 90 bp | CATTGTTTCCATAATGGCATCTTTTCCCTTTGCATTACCAGGGTCTaGACTATAACAGTAATAGAATGCATCTGGTACATCAAGAGTATA | + |
Preference number: 5 (lower is better) Translates to: HCFHNGIFSLCITRV*TITVIECIWYIKSI Trigger: TATACTCTTGATGTACCAGATGCATTCTATTACTGTTATAGTCCAGACCCTGGTAATGCAAAGGGAAAAGATGCCATTATGGAAACAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370008.4 ENST00000485167.1 ENST00000486601.5 |
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CDS-3UTR CAA 90 bp | AGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCACAAGTCATCAAACACTGTaGCTTTTATCTTCTGCCACA | + |
Preference number: 5 (lower is better) Translates to: SIQWVISMYIGGCEKLPTSHQTL*LLSSAT Trigger: TGTGGCAGAAGATAAAAGCAACAGTGTTTGATGACT...TGTGGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR CAA 90 bp | ATAAGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCCATTCGCCTTCTTTCTaGCAGTCATCAAACACTGTT | + |
Preference number: 5 (lower is better) Translates to: ISIQWVISMYIGGCEKLPHSPSF*QSSNTV Trigger: AACAGTGTTTGATGACTGCAAGAAAGAAGGCGAATG...GGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR CAA 90 bp | ATAAGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCAGAAGATCTGTCATTTaGCAACACGATGCCAAAAGC | + |
Preference number: 5 (lower is better) Translates to: ISIQWVISMYIGGCEKLPRRSVI*QHDAKS Trigger: GCTTTTGGCATCGTGTTGCAAAATGACAGATCTTCT...GGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR CAA 90 bp | AGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCACAATAAAGAGCTTTCATTaGTCTGACAGGTTCACGGTT | + |
Preference number: 5 (lower is better) Translates to: SIQWVISMYIGGCEKLPTIKSFH*SDRFTV Trigger: AACCGTGAACCTGTCAGACAAATGAAAGCTCTTTAT...TGTGGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR CAA 90 bp | ATAGGTGGCTGTGAAAAATTACCCACAACTCTAATATATTCTCCTCCAAAGGTGTATGCTGCTTTATACTaGTTCTCCGATTTACTTGCA | + |
Preference number: 5 (lower is better) Translates to: IGGCEKLPTTLIYSPPKVYAALY*FSDLLA Trigger: TGCAAGTAAATCGGAGAACAAGTATAAAGCAGCATA...CACCTTTGGAGGAGAATATATTAGAGTTGTGGGTAATTTTTCACAGCCACCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR CAA 90 bp | ATAGGTGGCTGTGAAAAATTACCCACAACTCTAATATATTCTCCTCCAAAGGTGCATCTTCTTATTGACTaGGAGCAAGAAGCCTTAATT | + |
Preference number: 5 (lower is better) Translates to: IGGCEKLPTTLIYSPPKVHLLID*EQEALI Trigger: AATTAAGGCTTCTTGCTCCAAGTCAATAAGAAGATG...CACCTTTGGAGGAGAATATATTAGAGTTGTGGGTAATTTTTCACAGCCACCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR CAA 90 bp | AGTATGTACATAGGTGGCTGTGAAAAATTACCCACAACTCTAATATATTCTCCTTCCTCCATAATATCTTaGATAAAAGGTGTCCACCGA | + |
Preference number: 5 (lower is better) Translates to: SMYIGGCEKLPTTLIYSPSSIIS*IKGVHR Trigger: TCGGTGGACACCTTTTATCAAAGATATTATGGAGGA...AGGAGAATATATTAGAGTTGTGGGTAATTTTTCACAGCCACCTATGTACATACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR CAA 90 bp | AGTATGTACATAGGTGGCTGTGAAAAATTACCCACAACTCTAATATATTCTCCTGTTAAGATGGACAACTaGCTTAGTAATCTGTTTTCG | + |
Preference number: 5 (lower is better) Translates to: SMYIGGCEKLPTTLIYSPVKMDN*LSNLFS Trigger: CGAAAACAGATTACTAAGCAAGTTGTCCATCTTAAC...AGGAGAATATATTAGAGTTGTGGGTAATTTTTCACAGCCACCTATGTACATACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR CAA 90 bp | ATAAGTATCCAATGGGTAATTAGTATGTACATAGGTGGCTGTGAAAAATTACCCTCATCCAACAGCTTTTaGGGTGTTAAAACATGTGTA | + |
Preference number: 5 (lower is better) Translates to: ISIQWVISMYIGGCEKLPSSNSF*GVKTCV Trigger: TACACATGTTTTAACACCCAAAAAGCTGTTGGATGA...GGGTAATTTTTCACAGCCACCTATGTACATACTAATTACCCATTGGATACTTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS-3UTR CAA 90 bp | AGTATGTACATAGGTGGCTGTGAAAAATTACCCACAACTCTAATATATTCTCCTAAGGAGACTTTATCCTaGGGTTTATTCAGCATCTTT | + |
Preference number: 5 (lower is better) Translates to: SMYIGGCEKLPTTLIYSPKETLS*GLFSIF Trigger: AAAGATGCTGAATAAACCCAAGGATAAAGTCTCCTT...AGGAGAATATATTAGAGTTGTGGGTAATTTTTCACAGCCACCTATGTACATACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS GCA 72 bp | GAGTACTCGCATGGAATCTTTCACCTTCTGTCCTTCTaGATCAGTTCCAAGTGCCAGGTCCTGTTCAGTTTT | + |
Preference number: 6 (lower is better) Translates to: EYSHGIFHLLSF*ISSKCQVLFSF Trigger: AAAACTGAACAGGACCTGGCACTTGGAACTGATGCAGAAGGACAGAAGGTGAAAGATTCCATGCGAGTACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS GCA 72 bp | AAGTTTCTTCTGCAGACCGATCCTTTCTTAACGGTTTaGCTTGTTGAGATTGGGGAACAATGGGAACACCAA | + |
Preference number: 6 (lower is better) Translates to: KFLLQTDPFLTV*LVEIGEQWEHQ Trigger: TTGGTGTTCCCATTGTTCCCCAATCTCAACAAGGCAAACCGTTAAGAAAGGATCGGTCTGCAGAAGAAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370008.4 ENST00000472099.1 |
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CDS CCA 72 bp | ATGCCATTGCCTGAAAGGTCAGTTCATGCAGGACAGTaGACACAGGATCAAAGCCACGATCAATTATTAAGA | + |
Preference number: 6 (lower is better) Translates to: MPLPERSVHAGQ*TQDQSHDQLLR Trigger: TCTTAATAATTGATCGTGGCTTTGATCCTGTGTCCACTGTCCTGCATGAACTGACCTTTCAGGCAATGGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370008.4 ENST00000485167.1 |
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CDS TCA 72 bp | GACAAGACTGAATCATCCTTGGAACTACTGATTTCCTaGGTCAAGATCAGGAAGGACTGCATTGAGTTTTCC | + |
Preference number: 6 (lower is better) Translates to: DKTESSLELLIS*VKIRKDCIEFS Trigger: GGAAAACTCAATGCAGTCCTTCCTGATCTTGACTCAGGAAATCAGTAGTTCCAAGGATGATTCAGTCTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485167.1 |
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CDS TCA 72 bp | AGACACCCTCCTTCCATTTGTGGAACTAGACAAGACTaGATCATCCTTGGAACTACTGATTTCCTGAGTCAA | + |
Preference number: 6 (lower is better) Translates to: RHPPSICGTRQD*IILGTTDFLSQ Trigger: TTGACTCAGGAAATCAGTAGTTCCAAGGATGATTCAGTCTTGTCTAGTTCCACAAATGGAAGGAGGGTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485167.1 |
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CDS GCA 72 bp | TGCATTACCAGGGTCTGGACTATAACAGTAATAGAATaGATCTGGTACATCAAGAGTATACACCTGAGATTC | + |
Preference number: 6 (lower is better) Translates to: CITRVWTITVIE*IWYIKSIHLRF Trigger: GAATCTCAGGTGTATACTCTTGATGTACCAGATGCATTCTATTACTGTTATAGTCCAGACCCTGGTAATGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370008.4 ENST00000485167.1 ENST00000486601.5 |
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CDS TCA 72 bp | ATAATATCTTTGATAAAAGGTGTCCACCGAGAGAGCTaGAAAGTTTCTTCTGCAGACCGATCCTTTCTTAAC | + |
Preference number: 6 (lower is better) Translates to: IISLIKGVHRES*KVSSADRSFLN Trigger: GTTAAGAAAGGATCGGTCTGCAGAAGAAACTTTTCAGCTCTCTCGGTGGACACCTTTTATCAAAGATATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370008.4 ENST00000472099.1 |
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CDS CAA 72 bp | TCATCTAAAAGCATTATCTTCCATTCGCCTTCTTTCTaGCAGTCATCAAACACTGTTGCTTTTATCTTCTGC | + |
Preference number: 6 (lower is better) Translates to: SSKSIIFHSPSF*QSSNTVAFIFC Trigger: GCAGAAGATAAAAGCAACAGTGTTTGATGACTGCAAGAAAGAAGGCGAATGGAAGATAATGCTTTTAGATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000370008.4 ENST00000469338.1 ENST00000483586.5 |
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CDS CAA 90 bp | CACTGTGCTCAATTATATAAGGCTGCACTAAGGATGAAAGCCCTTTaGTCATTTAAAATACCACTTTGTTCTTACACAATACCTTTGACT | + |
Preference number: 6 (lower is better) Translates to: HCAQLYKAALRMKAL*SFKIPLCSYTIPLT Trigger: AGTCAAAGGTATTGTGTAAGAACAAAGTGGTATTTTAAATGACAAAAGGGCTTTCATCCTTAGTGCAGCCTTATATAATTGAGCACAGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485167.1 |
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CDS CAA 72 bp | CATCTTCTTATTGACTTGGAGCAAGAAGCCTTAATTTaGTTAAAGAGATTATCAGGGCAAAAGTCAGTGAAG | + |
Preference number: 6 (lower is better) Translates to: HLLIDLEQEALI*LKRLSGQKSVK Trigger: CTTCACTGACTTTTGCCCTGATAATCTCTTTAACAAAATTAAGGCTTCTTGCTCCAAGTCAATAAGAAGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370008.4 |
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CDS GCA 72 bp | GCTCATATTCTATCCTGTTTGTATATGCCCTTTATATaGCCTTCAAGTTATACTTGCTTGTATGTATCATTC | + |
Preference number: 6 (lower is better) Translates to: AHILSCLYMPFI*PSSYTCLYVSF Trigger: GAATGATACATACAAGCAAGTATAACTTGAAGGGCATATAAAGGGCATATACAAACAGGATAGAATATGAGC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485167.1 |
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CDS CAA 72 bp | CATCTTCTTATTGACTTGGAGCAAGAAGCCTTAATTTaGTTAAAGAGATTATCAGGGCAAATTAAAGTGAGG | + |
Preference number: 6 (lower is better) Translates to: HLLIDLEQEALI*LKRLSGQIKVR Trigger: CCTCACTTTAATTTGCCCTGATAATCTCTTTAACAAAATTAAGGCTTCTTGCTCCAAGTCAATAAGAAGATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486601.5 |