RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STX5 (Homo sapiens)

Ensembl gene IDs: ENSG00000162236

Ensembl transcript IDs: ENST00000294179.8, ENST00000377897.8, ENST00000394690.5, ENST00000431400.2, ENST00000486437.1, ENST00000488303.5, ENST00000491231.5, ENST00000492066.5, ENST00000677401.1

Found 602 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGGCCTTTCTCCCAAGTACCCTGCACAGGCTCAGTGGCAGCACTaGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGC +
Preference number: 1 (lower is better)
Translates to: QGLSPKYPAQAQWQH*PLAFPGGSQTPTEC
Trigger: GCACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCTGTGCAGGGTACTTGGGAGAAAGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR CCA 90 bp CCAGGGAAACAGGGCCTTTCTCCCAAGTACCCTGCACAGGCTCAGTaGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCA +
Preference number: 1 (lower is better)
Translates to: PGKQGLSPKYPAQAQ*QHWPLAFPGGSQTP
Trigger: TGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCTGTGCAGGGTACTTGGGAGAAAGGCCCTGTTTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR CCA 90 bp CTGGTCCGAGAGTCCATCATGTCGATGGCGACATCCTTGGAGGCATaGGACTCTGCCCCCAGAACCACAGCACCACCGCCCAGGTGGTTA +
Preference number: 1 (lower is better)
Translates to: LVRESIMSMATSLEA*DSAPRTTAPPPRWL
Trigger: TAACCACCTGGGCGGTGGTGCTGTGGTTCTGGGGGCAGAGTCCCATGCCTCCAAGGATGTCGCCATCGACATGATGGACTCTCGGACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR GCA 90 bp TTCGACTGCAAGGAGACCACAATGGTGTTGGAGTGGGTCTGCAGGTaGCGGCCACTCTGGCTGCCCTTGGCTCTCACGAAATCCTGGAGC +
Preference number: 1 (lower is better)
Translates to: FDCKETTMVLEWVCR*RPLWLPLALTKSWS
Trigger: GCTCCAGGATTTCGTGAGAGCCAAGGGCAGCCAGAGTGGCCGGCACCTGCAGACCCACTCCAACACCATTGTGGTCTCCTTGCAGTCGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR GCA 90 bp GCCAGTTTCGACTGCAAGGAGACCACAATGGTGTTGGAGTGGGTCTaGAGGTGCCGGCCACTCTGGCTGCCCTTGGCTCTCACGAAATCC +
Preference number: 1 (lower is better)
Translates to: ASFDCKETTMVLEWV*RCRPLWLPLALTKS
Trigger: GGATTTCGTGAGAGCCAAGGGCAGCCAGAGTGGCCGGCACCTGCAGACCCACTCCAACACCATTGTGGTCTCCTTGCAGTCGAAACTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR CCA 90 bp CACCGGTTGGAGGTGACAGACTGGAAGTACTTGAGGATCTCTGAATaGGCGGCCTCAACGTCCAGCTGGGCTCCTAGCACGTTCTCGTCG +
Preference number: 1 (lower is better)
Translates to: HRLEVTDWKYLRISE*AASTSSWAPSTFSS
Trigger: CGACGAGAACGTGCTAGGAGCCCAGCTGGACGTTGAGGCCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAACCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR CCA 90 bp ATAGAAGCCAGTTTCGACTGCAAGGAGACCACAATGGTGTTGGAGTaGGTCTGCAGGTGCCGGCCACTCTGGCTGCCCTTGGCTCTCACG +
Preference number: 1 (lower is better)
Translates to: IEASFDCKETTMVLE*VCRCRPLWLPLALT
Trigger: CGTGAGAGCCAAGGGCAGCCAGAGTGGCCGGCACCTGCAGACCCACTCCAACACCATTGTGGTCTCCTTGCAGTCGAAACTGGCTTCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR GCA 90 bp ATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTCTCCCAAGTACCCTaGACAGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGG +
Preference number: 1 (lower is better)
Translates to: ILSSSRETGPFSQVP*TGSVAALATCLPRR
Trigger: CCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCTGTGCAGGGTACTTGGGAGAAAGGCCCTGTTTCCCTGGAACTGCTAAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR TCA 90 bp CAGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTaGAGGGCTCAGGGCTCCCTGCCTCACATGGTGAAAGAGGAAGAA +
Preference number: 1 (lower is better)
Translates to: QIESPAANVRGCAGS*RAQGSLPHMVKEEE
Trigger: TTCTTCCTCTTTCACCATGTGAGGCAGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR GCA 90 bp TCTCCTAGTGGAAACAACCTCCCCCACTGGCCCCCAGCTGGCCTCTaGTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCC +
Preference number: 1 (lower is better)
Translates to: SPSGNNLPHWPPAGL*SLPVTSQQSSNLEP
Trigger: GGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAGGCCAGCTGGGGGCCAGTGGGGGAGGTTGTTTCCACTAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR GCA 90 bp CCACAATGGTGTTGGAGTGGGTCTGCAGGTGCCGGCCACTCTGGCTaGCCTTGGCTCTCACGAAATCCTGGAGCTGAGCAATTTGTTTGT +
Preference number: 1 (lower is better)
Translates to: PQWCWSGSAGAGHSG*PWLSRNPGAEQFVC
Trigger: ACAAACAAATTGCTCAGCTCCAGGATTTCGTGAGAGCCAAGGGCAGCCAGAGTGGCCGGCACCTGCAGACCCACTCCAACACCATTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR GCA 90 bp CACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTaGCTCAGAGTAGAGAGGGTTCAAGCAAGGAAGACCACAAAGATG +
Preference number: 1 (lower is better)
Translates to: HWPLAFPGGSQTPTE*LRVERVQARKTTKM
Trigger: CATCTTTGTGGTCTTCCTTGCTTGAACCCTCTCTACTCTGAGGCACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
3UTR CCA 90 bp ATGAGGAAGATTTTGACCATGAGCCACCGGTTGGAGGTGACAGACTaGAAGTACTTGAGGATCTCTGAATGGGCGGCCTCAACGTCCAGC +
Preference number: 1 (lower is better)
Translates to: MRKILTMSHRLEVTD*KYLRISEWAASTSS
Trigger: GCTGGACGTTGAGGCCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGTCAAAATCTTCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
3UTR TCA 90 bp CTTGCTGTAATTGGGAGAAAACGAGCTGCAGCACATTTGGCAGATTaGGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAG +
Preference number: 1 (lower is better)
Translates to: LAVIGRKRAAAHLAD*VTSSQCQGLCRQLK
Trigger: CTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCTGCAGCTCGTTTTCTCCCAATTACAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294179.8
ENST00000377897.8
3UTR GCA 90 bp CCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTaGTGCCAACGCTTCCTTTGGGAGAGGCTGGAGAGGGTTTATAAA +
Preference number: 1 (lower is better)
Translates to: PLFTHRKVGKGIISL*CQRFLWERLERVYK
Trigger: TTTATAAACCCTCTCCAGCCTCTCCCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR GCA 90 bp GGAGCCCAACTCAACAATTGTCGACTCAATGTTCTGCATGGTGTCTaGCCGACTCTGGATGTAGGAATCCTGCTCGTCAATGAGCTGCAG +
Preference number: 1 (lower is better)
Translates to: GAQLNNCRLNVLHGV*PTLDVGILLVNELQ
Trigger: CTGCAGCTCATTGACGAGCAGGATTCCTACATCCAGAGTCGGGCAGACACCATGCAGAACATTGAGTCGACAATTGTTGAGTTGGGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR CCA 90 bp CATGGTGAAAGAGGAAGAAAGAGGTCAATTGGGAAAATTGGTCCCTaGGGCTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCA +
Preference number: 1 (lower is better)
Translates to: HGERGRKRSIGKIGP*GCFLSSLTGRWVRA
Trigger: TGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAGCCCCAGGGACCAATTTTCCCAATTGACCTCTTTCTTCCTCTTTCACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR TCA 90 bp TGCCGGCCACTCTGGCTGCCCTTGGCTCTCACGAAATCCTGGAGCTaGGCAATTTGTTTGTTGAGGCTATTGATGTCCTGTTTGATGATA +
Preference number: 1 (lower is better)
Translates to: CRPLWLPLALTKSWS*AICLLRLLMSCLMI
Trigger: TATCATCAAACAGGACATCAATAGCCTCAACAAACAAATTGCTCAGCTCCAGGATTTCGTGAGAGCCAAGGGCAGCCAGAGTGGCCGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR GCA 90 bp CTCGTCGATCCTCTGAATGGTTTCCTCCTGTTCCTTAACCATGTGTaGCAACTGCTGAAAGATGGAGCCCAACTCAACAATTGTCGACTC +
Preference number: 1 (lower is better)
Translates to: LVDPLNGFLLFLNHV*QLLKDGAQLNNCRL
Trigger: GAGTCGACAATTGTTGAGTTGGGCTCCATCTTTCAGCAGTTGGCACACATGGTTAAGGAACAGGAGGAAACCATTCAGAGGATCGACGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR CCA 90 bp AATAAAAACTTGTTGGGTGGATGGAAGCAGGTGAACTGGGTCCCATaGGTGGGCAGAATTCACTCTATCTTCCAAAAGGCATCAAGCAGT +
Preference number: 1 (lower is better)
Translates to: NKNLLGGWKQVNWVP*VGRIHSIFQKASSS
Trigger: ACTGCTTGATGCCTTTTGGAAGATAGAGTGAATTCTGCCCACCCATGGGACCCAGTTCACCTGCTTCCATCCACCCAACAAGTTTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431400.2
3UTR-3UTR CCA 90 bp CACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCAGGTGCCGGCCACTCTaGCTGCCCTTGGCTCTCACG +
Preference number: 2 (lower is better)
Translates to: HQQPMSGVVQAAEGLRAPRCRPL*LPLALT
Trigger: CGTGAGAGCCAAGGGCAGCCAGAGTGGCCGGCACCT...GGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR-3UTR CCA 90 bp GGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACCCTGCACAGGCTCAGTaGCAGCACTGGCCACTTGCC +
Preference number: 2 (lower is better)
Translates to: GSVAALATCLPRRVPNPNPAQAQ*QHWPLA
Trigger: GGCAAGTGGCCAGTGCTGCCACTGAGCCTGTGCAGG...GTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR CAA 90 bp AGCTGCTGGCTGGTCCGAGAGTCCATCATGTCGATGGCGACATCCTaGGAGGCATGGGACTCTGCCCCCAGAACCACAGCACCACCGCCC +
Preference number: 2 (lower is better)
Translates to: SCWLVRESIMSMATS*EAWDSAPRTTAPPP
Trigger: GGGCGGTGGTGCTGTGGTTCTGGGGGCAGAGTCCCATGCCTCCAAGGATGTCGCCATCGACATGATGGACTCTCGGACCAGCCAGCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR-3UTR CCA 90 bp CAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGCCTCGCTCAGTGGCAGCACTaGCCACTTGCCTTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: QPMSGVVQAAEGLRAPCLAQWQH*PLAFPG
Trigger: TCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGC...GAGGCAGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp CACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCGCCTCAACGTCCAGCTaGGCTCCTAGCACGTTCTCG +
Preference number: 2 (lower is better)
Translates to: HQQPMSGVVQAAEGLRAPASTSS*APSTFS
Trigger: CGAGAACGTGCTAGGAGCCCAGCTGGACGTTGAGGC...GGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp AGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACCCCCAGCTGGCCTCTaGTCCCTTCCAGTCACTTCA +
Preference number: 2 (lower is better)
Translates to: RLSGSTGHLPSQEGPKPQPPAGL*SLPVTS
Trigger: TGAAGTGACTGGAAGGGAGCAGAGGCCAGCTGGGGG...TTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp ACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTCCCCCAGCTGGCCTCTaGTCCCTTCCAGTCACTTCA +
Preference number: 2 (lower is better)
Translates to: TSSQCQGLCRQLKGSGLPPPAGL*SLPVTS
Trigger: TGAAGTGACTGGAAGGGAGCAGAGGCCAGCTGGGGG...AGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp TGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGCCCCCCAGCTGGCCTCTaGTCCCTTCCAGTCACTTCA +
Preference number: 2 (lower is better)
Translates to: WQHWPLAFPGGSQTPTECPPAGL*SLPVTS
Trigger: TGAAGTGACTGGAAGGGAGCAGAGGCCAGCTGGGGG...GCACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp TTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGGTGCCCGGGAGAACTaGTCTCTCCGGCTCCTCTGC +
Preference number: 2 (lower is better)
Translates to: LSHQQPMSGVVQAAEGLRGAREN*SLRLLC
Trigger: GCAGAGGAGCCGGAGAGAGCAGTTCTCCCGGGCACC...CCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR-3UTR CCA 90 bp AGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCTGCACAGGCTCAGTaGCAGCACTGGCCACTTGCC +
Preference number: 2 (lower is better)
Translates to: SHQQPMSGVVQAAEGLRAPAQAQ*QHWPLA
Trigger: GGCAAGTGGCCAGTGCTGCCACTGAGCCTGTGCAGG...AGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR TCA 90 bp ACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTAATCCTGCTCGTCAATaGGCTGCAGCTGCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: TSSQCQGLCRQLKGSGLPNPARQ*AAAAGW
Trigger: CCAGCCAGCAGCTGCAGCTCATTGACGAGCAGGATT...AGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp AGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTCCCCCAGCTGGCCTCTaGTCCCTTCCAGTCACTTCA +
Preference number: 2 (lower is better)
Translates to: SGSTGHLPSQEGPKPQQSPPAGL*SLPVTS
Trigger: TGAAGTGACTGGAAGGGAGCAGAGGCCAGCTGGGGG...ACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp AGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAATTCTCCCAAGTACCCTaGACAGGCTCAGTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: RLSGSTGHLPSQEGPKPQFSQVP*TGSVAA
Trigger: TGCTGCCACTGAGCCTGTGCAGGGTACTTGGGAGAA...TTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp ACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTTTCTCCCAAGTACCCTaGACAGGCTCAGTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: TSSQCQGLCRQLKGSGLPFSQVP*TGSVAA
Trigger: TGCTGCCACTGAGCCTGTGCAGGGTACTTGGGAGAA...AGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp TGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGCTTCTCCCAAGTACCCTaGACAGGCTCAGTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: WQHWPLAFPGGSQTPTECFSQVP*TGSVAA
Trigger: TGCTGCCACTGAGCCTGTGCAGGGTACTTGGGAGAA...GCACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp CAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGCCTCGGCATCATCTCCCTTTaGTGCCAACGCTTCCTTTGG +
Preference number: 2 (lower is better)
Translates to: QPMSGVVQAAEGLRAPCLGIISL*CQRFLW
Trigger: CCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCC...GAGGCAGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp AGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTTGCTCGTCAATGAGCTaGAGCTGCTGGCTGGTCCGA +
Preference number: 2 (lower is better)
Translates to: SHQQPMSGVVQAAEGLRACSSMS*SCWLVR
Trigger: TCGGACCAGCCAGCAGCTGCAGCTCATTGACGAGCA...AGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp CACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCGGGGATCAGGGGCAGTaGTCATTCTTAGCAGTTCCA +
Preference number: 2 (lower is better)
Translates to: HQQPMSGVVQAAEGLRAPGDQGQ*SFLAVP
Trigger: TGGAACTGCTAAGAATGACCACTGCCCCTGATCCCC...GGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR TCA 90 bp CAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGCCTCTTCTCGTCGATCCTCTaGATGGTTTCCTCCTGTTCC +
Preference number: 2 (lower is better)
Translates to: QPMSGVVQAAEGLRAPCLFSSIL*MVSSCS
Trigger: GGAACAGGAGGAAACCATTCAGAGGATCGACGAGAA...GAGGCAGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp GTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGATTGGTCCCTGGGGCTaGTTCCTCTCTTCACTCACA +
Preference number: 2 (lower is better)
Translates to: VAALATCLPRRVPNPNRVIGPWG*FLSSLT
Trigger: TGTGAGTGAAGAGAGGAAGCAGCCCCAGGGACCAAT...CACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp AGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTAGACCACAATGGTGTTaGAGTGGGTCTGCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: SHQQPMSGVVQAAEGLRARPQWC*SGSAGA
Trigger: GGCACCTGCAGACCCACTCCAACACCATTGTGGTCT...AGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR-3UTR GCA 90 bp CACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCCCCCCAGCTGGCCTCTaGTCCCTTCCAGTCACTTCA +
Preference number: 2 (lower is better)
Translates to: HIWQIESPAANVRGCAGSPPAGL*SLPVTS
Trigger: TGAAGTGACTGGAAGGGAGCAGAGGCCAGCTGGGGG...GCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp AGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCTCAATGAGCTGCAGCTaGTGGCTGGTCCGAGAGTCC +
Preference number: 2 (lower is better)
Translates to: RLSHQQPMSGVVQAAEGLSMSCS*WLVRES
Trigger: GGACTCTCGGACCAGCCAGCAGCTGCAGCTCATTGA...GAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp AGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGTCGACTCAATGTTCTaGATGGTGTCTGCCCGACTC +
Preference number: 2 (lower is better)
Translates to: SGSTGHLPSQEGPKPQQSVDSMF*MVSARL
Trigger: GAGTCGGGCAGACACCATGCAGAACATTGAGTCGAC...ACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp CACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCGCTCAGTGGCAGCACTaGCCACTTGCCTTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: HIWQIESPAANVRGCAGSAQWQH*PLAFPG
Trigger: TCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGC...GCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp CTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACCCTGCACAGGCTCAGTaGCAGCACTGGCCACTTGCC +
Preference number: 2 (lower is better)
Translates to: LSSLTGRWVRASSPFAANPAQAQ*QHWPLA
Trigger: GGCAAGTGGCCAGTGCTGCCACTGAGCCTGTGCAGG...GTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR TCA 90 bp GTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTGTACTTGAGGATCTCTaGATGGGCGGCCTCAACGTC +
Preference number: 2 (lower is better)
Translates to: VGDQGQWSFLAVPGKQGLVLEDL*MGGLNV
Trigger: GACGTTGAGGCCGCCCATTCAGAGATCCTCAAGTAC...AAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp ACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCCTTTGGGTGCTCGTCAATGAGCTaGAGCTGCTGGCTGGTCCGA +
Preference number: 2 (lower is better)
Translates to: TGRWVRASSPFAANASFGCSSMS*SCWLVR
Trigger: TCGGACCAGCCAGCAGCTGCAGCTCATTGACGAGCA...CCCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp GGTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTGTCGACTCAATGTTCTaGATGGTGTCTGCCCGACTC +
Preference number: 2 (lower is better)
Translates to: GGGSGAVVILSSSRETGPVDSMF*MVSARL
Trigger: GAGTCGGGCAGACACCATGCAGAACATTGAGTCGAC...AGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp CAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGCCTCAAGAAAGAGGTCAATTaGGAAAATTGGTCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: QPMSGVVQAAEGLRAPCLKKEVN*ENWSLG
Trigger: CCCCAGGGACCAATTTTCCCAATTGACCTCTTTCTT...GAGGCAGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp TCCCTGGGGCTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTTGAGGATCTCTGAATaGGCGGCCTCAACGTCCAGC +
Preference number: 2 (lower is better)
Translates to: SLGLLPLFTHRKVGKGIILRISE*AASTSS
Trigger: GCTGGACGTTGAGGCCGCCCATTCAGAGATCCTCAA...GATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAGCCCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp CAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGCCTCTTGGAGGTGACAGACTaGAAGTACTTGAGGATCTCT +
Preference number: 2 (lower is better)
Translates to: QPMSGVVQAAEGLRAPCLLEVTD*KYLRIS
Trigger: AGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAA...GAGGCAGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp CACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCGCTGCAGCTGCTGGCTaGTCCGAGAGTCCATCATGT +
Preference number: 2 (lower is better)
Translates to: HIWQIESPAANVRGCAGSAAAAG*SESPSC
Trigger: ACATGATGGACTCTCGGACCAGCCAGCAGCTGCAGC...GCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR-3UTR TCA 90 bp AGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCCAGACTGGAAGTACTTaGGGATCTCTGAATGGGCGG +
Preference number: 2 (lower is better)
Translates to: RLSHQQPMSGVVQAAEGLQTGST*GSLNGR
Trigger: CCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTG...GAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp AGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCATTGGTCCCTGGGGCTaGTTCCTCTCTTCACTCACA +
Preference number: 2 (lower is better)
Translates to: RLSHQQPMSGVVQAAEGLIGPWG*FLSSLT
Trigger: TGTGAGTGAAGAGAGGAAGCAGCCCCAGGGACCAAT...GAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp CAGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCATTCCTTAACCATGTGTaGCAACTGCTGAAAGATGGA +
Preference number: 2 (lower is better)
Translates to: QAQWQHWPLAFPGGSQTPFLNHV*QLLKDG
Trigger: TCCATCTTTCAGCAGTTGGCACACATGGTTAAGGAA...TGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp CTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGCCTGCACAGGCTCAGTaGCAGCACTGGCCACTTGCC +
Preference number: 2 (lower is better)
Translates to: LCSLPVTSQQSSNLEPCVPAQAQ*QHWPLA
Trigger: GGCAAGTGGCCAGTGCTGCCACTGAGCCTGTGCAGG...CACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp CCCTGGGGCTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTGGGGATCAGGGGCAGTaGTCATTCTTAGCAGTTCCA +
Preference number: 2 (lower is better)
Translates to: PWGCFLSSLTGRWVRASSGDQGQ*SFLAVP
Trigger: TGGAACTGCTAAGAATGACCACTGCCCCTGATCCCC...AGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAGCCCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp AGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCGGGAAAATTGGTCCCTaGGGCTGCTTCCTCTCTTCA +
Preference number: 2 (lower is better)
Translates to: RLSHQQPMSGVVQAAEGLGKIGP*GCFLSS
Trigger: TGAAGAGAGGAAGCAGCCCCAGGGACCAATTTTCCC...GAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp TCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCCTTGAGGATCTCTGAATaGGCGGCCTCAACGTCCAGC +
Preference number: 2 (lower is better)
Translates to: SLTGRWVRASSPFAANASLRISE*AASTSS
Trigger: GCTGGACGTTGAGGCCGCCCATTCAGAGATCCTCAA...GGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp CTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGGCTCAGTGGCAGCACTaGCCACTTGCCTTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: LCSLPVTSQQSSNLEPCVAQWQH*PLAFPG
Trigger: TCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGC...CACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp CAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGCCTCACATTTGGAGGTGACAGACTaGAAGTACTTGAGGATCTCT +
Preference number: 2 (lower is better)
Translates to: QCQGLCRQLKGSGLPASHLEVTD*KYLRIS
Trigger: AGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAA...ATGTGAGGCAGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp CACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCCTTTGGGCAAGGAGACCACAATaGTGTTGGAGTGGGTCTGCA +
Preference number: 2 (lower is better)
Translates to: HRKVGKGIISLCCQRFLWARRPQ*CWSGSA
Trigger: TGCAGACCCACTCCAACACCATTGTGGTCTCCTTGC...CCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR-3UTR TCA 90 bp TGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGTACTTGAGGATCTCTaGATGGGCGGCCTCAACGTC +
Preference number: 2 (lower is better)
Translates to: CFLSSLTGRWVRASSPFAVLEDL*MGGLNV
Trigger: GACGTTGAGGCCGCCCATTCAGAGATCCTCAAGTAC...AGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR TCA 90 bp GACATAGAAGCCAGTTTCGACTGCAAGGAGACCACAATGGTGTTGGAGTGGGTCGTACTTGAGGATCTCTaGATGGGCGGCCTCAACGTC +
Preference number: 2 (lower is better)
Translates to: DIEASFDCKETTMVLEWVVLEDL*MGGLNV
Trigger: GACGTTGAGGCCGCCCATTCAGAGATCCTCAAGTAC...GACCCACTCCAACACCATTGTGGTCTCCTTGCAGTCGAAACTGGCTTCTATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR-3UTR GCA 90 bp GACATAGAAGCCAGTTTCGACTGCAAGGAGACCACAATGGTGTTGGAGTGGGTCTTCTCCCAAGTACCCTaGACAGGCTCAGTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: DIEASFDCKETTMVLEWVFSQVP*TGSVAA
Trigger: TGCTGCCACTGAGCCTGTGCAGGGTACTTGGGAGAA...GACCCACTCCAACACCATTGTGGTCTCCTTGCAGTCGAAACTGGCTTCTATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR-3UTR GCA 90 bp TCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCCATCATCTCCCTTTGCTaGCAACGCTTCCTTTGGGAG +
Preference number: 2 (lower is better)
Translates to: SLTGRWVRASSPFAANASIISLC*QRFLWE
Trigger: CTCCCAAAGGAAGCGTTGGCAGCAAAGGGAGATGAT...GGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp CTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCATCATCTCCCTTTGCTaGCAACGCTTCCTTTGGGAG +
Preference number: 2 (lower is better)
Translates to: LFTHRKVGKGIISLCCQRIISLC*QRFLWE
Trigger: CTCCCAAAGGAAGCGTTGGCAGCAAAGGGAGATGAT...GCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp CTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCATTGGTCCCTGGGGCTaGTTCCTCTCTTCACTCACA +
Preference number: 2 (lower is better)
Translates to: LLPLFTHRKVGKGIISLCIGPWG*FLSSLT
Trigger: TGTGAGTGAAGAGAGGAAGCAGCCCCAGGGACCAAT...GCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp CTGGAGAGGGTTTATAAAAATCTCCTAGTGGAAACAACCTCCCCCACTGGCCCCCAATGTCAGGGGTTGTaGAGGCAGCTGAAGGGCTCA +
Preference number: 2 (lower is better)
Translates to: LERVYKNLLVETTSPTGPQCQGL*RQLKGS
Trigger: TGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTG...GGGGCCAGTGGGGGAGGTTGTTTCCACTAGGAGATTTTTATAAACCCTCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp GCTGCAGCTGCTGGCTGGTCCGAGAGTCCATCATGTCGATGGCGACATCCTTGGTTCCTTAACCATGTGTaGCAACTGCTGAAAGATGGA +
Preference number: 2 (lower is better)
Translates to: AAAAGWSESPSCRWRHPWFLNHV*QLLKDG
Trigger: TCCATCTTTCAGCAGTTGGCACACATGGTTAAGGAA...CCAAGGATGTCGCCATCGACATGATGGACTCTCGGACCAGCCAGCAGCTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR-3UTR GCA 90 bp CCTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTTTCTCCCAAGTACCCTaGACAGGCTCAGTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: PLLPSSHFTAEFKSRTLCFSQVP*TGSVAA
Trigger: TGCTGCCACTGAGCCTGTGCAGGGTACTTGGGAGAA...ACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp GAAAACGAGCTGCAGCACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGGGGCATCATCTCCCTTTaGTGCCAACGCTTCCTTTGG +
Preference number: 2 (lower is better)
Translates to: ENELQHIWQIESPAANVRGIISL*CQRFLW
Trigger: CCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCC...CCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCTGCAGCTCGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
3UTR-3UTR GCA 90 bp TTGAAGTCATTGGACATAGAAGCCAGTTTCGACTGCAAGGAGACCACAATGGTGGCCGGCCACTCTGGCTaGCCTTGGCTCTCACGAAAT +
Preference number: 2 (lower is better)
Translates to: LKSLDIEASFDCKETTMVAGHSG*PWLSRN
Trigger: ATTTCGTGAGAGCCAAGGGCAGCCAGAGTGGCCGGC...CACCATTGTGGTCTCCTTGCAGTCGAAACTGGCTTCTATGTCCAATGACTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR-3UTR CCA 90 bp GTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTTCATAGGCCTGAGGCTCAGTGGCAGCACTaGCCACTTGCCTTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: VTSQQSSNLEPCVFHRPEAQWQH*PLAFPG
Trigger: TCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGC...CTCAGGCCTATGAAACACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR CAA 90 bp TCTTGCTGTAATTGGGAGAAAACGAGCTGCAGCACATTTGGCAGATaGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAA +
Preference number: 2 (lower is better)
Translates to: SCCNWEKTSCSTFGR*SHQQPMSGVVQAAE
Trigger: TTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCTGCAGCTCGTTTTCTCCCAATTACAGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294179.8
ENST00000377897.8
3UTR-3UTR TCA 90 bp CTGTTCCTTAACCATGTGTGCCAACTGCTGAAAGATGGAGCCCAACTCAACAATAATCCTGCTCGTCAATaGGCTGCAGCTGCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: LFLNHVCQLLKDGAQLNNNPARQ*AAAAGW
Trigger: CCAGCCAGCAGCTGCAGCTCATTGACGAGCAGGATT...ATTGTTGAGTTGGGCTCCATCTTTCAGCAGTTGGCACACATGGTTAAGGAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp CTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGGGCATCATCTCCCTTTaGTGCCAACGCTTCCTTTGG +
Preference number: 2 (lower is better)
Translates to: LCSLPVTSQQSSNLEPCVGIISL*CQRFLW
Trigger: CCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCC...CACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp CGATTTGAAGTCATTGGACATAGAAGCCAGTTTCGACTGCAAGGAGACCACAATGCTCAGTGGCAGCACTaGCCACTTGCCTTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: RFEVIGHRSQFRLQGDHNAQWQH*PLAFPG
Trigger: TCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGC...ATTGTGGTCTCCTTGCAGTCGAAACTGGCTTCTATGTCCAATGACTTCAAATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR-3UTR CCA 90 bp AGGCTGGAGAGGGTTTATAAAAATCTCCTAGTGGAAACAACCTCCCCCACTGGCGGGGATCAGGGGCAGTaGTCATTCTTAGCAGTTCCA +
Preference number: 2 (lower is better)
Translates to: RLERVYKNLLVETTSPTGGDQGQ*SFLAVP
Trigger: TGGAACTGCTAAGAATGACCACTGCCCCTGATCCCC...GCCAGTGGGGGAGGTTGTTTCCACTAGGAGATTTTTATAAACCCTCTCCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp CTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGGGGAAAATTGGTCCCTaGGGCTGCTTCCTCTCTTCA +
Preference number: 2 (lower is better)
Translates to: LCSLPVTSQQSSNLEPCVGKIGP*GCFLSS
Trigger: TGAAGAGAGGAAGCAGCCCCAGGGACCAATTTTCCC...CACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp TGCTGCCAACGCTTCCTTTGGGAGAGGCTGGAGAGGGTTTATAAAAATCTCCTAATTGGTCCCTGGGGCTaGTTCCTCTCTTCACTCACA +
Preference number: 2 (lower is better)
Translates to: CCQRFLWERLERVYKNLLIGPWG*FLSSLT
Trigger: TGTGAGTGAAGAGAGGAAGCAGCCCCAGGGACCAAT...TAGGAGATTTTTATAAACCCTCTCCAGCCTCTCCCAAAGGAAGCGTTGGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp CTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCAAGAAAGAGGTCAATTaGGAAAATTGGTCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: LLPLFTHRKVGKGIISLCKKEVN*ENWSLG
Trigger: CCCCAGGGACCAATTTTCCCAATTGACCTCTTTCTT...GCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp CCTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTACTCAATGTTCTGCATaGTGTCTGCCCGACTCTGGA +
Preference number: 2 (lower is better)
Translates to: PLLPSSHFTAEFKSRTLCTQCSA*CLPDSG
Trigger: TCCAGAGTCGGGCAGACACCATGCAGAACATTGAGT...ACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp ACTCTGGCTGCCCTTGGCTCTCACGAAATCCTGGAGCTGAGCAATTTGTTTGTTACTCAATGTTCTGCATaGTGTCTGCCCGACTCTGGA +
Preference number: 2 (lower is better)
Translates to: TLAALGSHEILELSNLFVTQCSA*CLPDSG
Trigger: TCCAGAGTCGGGCAGACACCATGCAGAACATTGAGT...AACAAACAAATTGCTCAGCTCCAGGATTTCGTGAGAGCCAAGGGCAGCCAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR-3UTR TCA 90 bp TTTGCTGCCAACGCTTCCTTTGGGAGAGGCTGGAGAGGGTTTATAAAAATCTCCTTCTCGTCGATCCTCTaGATGGTTTCCTCCTGTTCC +
Preference number: 2 (lower is better)
Translates to: FAANASFGRGWRGFIKISFSSIL*MVSSCS
Trigger: GGAACAGGAGGAAACCATTCAGAGGATCGACGAGAA...GGAGATTTTTATAAACCCTCTCCAGCCTCTCCCAAAGGAAGCGTTGGCAGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp TGTCGACTCAATGTTCTGCATGGTGTCTGCCCGACTCTGGATGTAGGAATCCTGTTGGAGGTGACAGACTaGAAGTACTTGAGGATCTCT +
Preference number: 2 (lower is better)
Translates to: CRLNVLHGVCPTLDVGILLEVTD*KYLRIS
Trigger: AGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAA...CAGGATTCCTACATCCAGAGTCGGGCAGACACCATGCAGAACATTGAGTCGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR TCA 90 bp TCTTGCTGTAATTGGGAGAAAACGAGCTGCAGCACATTTGGCAGATTGAGTCACGCACATTTGGCAGATTaGGTCACCAGCAGCCAATGT +
Preference number: 2 (lower is better)
Translates to: SCCNWEKTSCSTFGRLSHAHLAD*VTSSQC
Trigger: ACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGC...GTGACTCAATCTGCCAAATGTGCTGCAGCTCGTTTTCTCCCAATTACAGCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294179.8
ENST00000377897.8
3UTR-3UTR TCA 90 bp CTGTTCCTTAACCATGTGTGCCAACTGCTGAAAGATGGAGCCCAACTCAACAATATGTGTGCCAACTGCTaGAAGATGGAGCCCAACTCA +
Preference number: 2 (lower is better)
Translates to: LFLNHVCQLLKDGAQLNNMCANC*KMEPNS
Trigger: TGAGTTGGGCTCCATCTTTCAGCAGTTGGCACACAT...ATTGTTGAGTTGGGCTCCATCTTTCAGCAGTTGGCACACATGGTTAAGGAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR GCA 90 bp GTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTTCATAGGCCTGAGCAAACCCCAACAGAGTaGCTCAGAGTAGAGAGGGTT +
Preference number: 2 (lower is better)
Translates to: VTSQQSSNLEPCVFHRPEQTPTE*LRVERV
Trigger: AACCCTCTCTACTCTGAGGCACTCTGTTGGGGTTTG...CTCAGGCCTATGAAACACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CCA 90 bp GAGAAAACGAGCTGCAGCACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAAAGAAAGAGGTCAATTaGGAAAATTGGTCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: EKTSCSTFGRLSHQQPMSKKEVN*ENWSLG
Trigger: CCCCAGGGACCAATTTTCCCAATTGACCTCTTTCTT...TGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCTGCAGCTCGTTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294179.8
ENST00000377897.8
3UTR-3UTR CCA 90 bp TGCTGCCAACGCTTCCTTTGGGAGAGGCTGGAGAGGGTTTATAAAAATCTCCTACCAGAAATGATGACATaGCTAGTGAGGCTGACAGTC +
Preference number: 2 (lower is better)
Translates to: CCQRFLWERLERVYKNLLPEMMT*LVRLTV
Trigger: GACTGTCAGCCTCACTAGCCATGTCATCATTTCTGG...TAGGAGATTTTTATAAACCCTCTCCAGCCTCTCCCAAAGGAAGCGTTGGCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294179.8
3UTR-3UTR CCA 90 bp GATTTTGACCATGAGCCACCGGTTGGAGGTGACAGACTGGAAGTACTTGAGGATCCAACTGCTGAAAGATaGAGCCCAACTCAACAATTG +
Preference number: 2 (lower is better)
Translates to: DFDHEPPVGGDRLEVLEDPTAER*SPTQQL
Trigger: CAATTGTTGAGTTGGGCTCCATCTTTCAGCAGTTGG...ATCCTCAAGTACTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGTCAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR CAA 90 bp TGCTTCAGGTTCTCTGTCCTCACTTCTAAAACCGATTTGAAGTCATaGGACATAGAAGCCAGTTTCGACTGCAAGGAGACCACAATGGTG +
Preference number: 2 (lower is better)
Translates to: CFRFSVLTSKTDLKS*DIEASFDCKETTMV
Trigger: CACCATTGTGGTCTCCTTGCAGTCGAAACTGGCTTCTATGTCCAATGACTTCAAATCGGTTTTAGAAGTGAGGACAGAGAACCTGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR-3UTR GCA 90 bp CTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTTCACATCAAAGAGGGACTTaGGCTTTGCCAAGATTGTCA +
Preference number: 2 (lower is better)
Translates to: LPSSHFTAEFKSRTLCVSHQRGT*ALPRLS
Trigger: TGACAATCTTGGCAAAGCGCAAGTCCCTCTTTGATG...TGAAACACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR-3UTR TCA 90 bp ACTTCTAAAACCGATTTGAAGTCATTGGACATAGAAGCCAGTTTCGACTGCAAGACGAAATCCTGGAGCTaGGCAATTTGTTTGTTGAGG +
Preference number: 2 (lower is better)
Translates to: TSKTDLKSLDIEASFDCKTKSWS*AICLLR
Trigger: CCTCAACAAACAAATTGCTCAGCTCCAGGATTTCGT...CTTGCAGTCGAAACTGGCTTCTATGTCCAATGACTTCAAATCGGTTTTAGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR-3UTR CAA 90 bp CCCTGGGGCTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTGGCAGCACTGGCCACTaGCCTTCCCAGGAGGGTCCC +
Preference number: 3 (lower is better)
Translates to: PWGCFLSSLTGRWVRASSGSTGH*PSQEGP
Trigger: GGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCC...AGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAGCCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR GCA 72 bp GACTGCAAGGAGACCACAATGGTGTTGGAGTGGGTCTaGAGGTGCCGGCCACTCTGGCTGCCCTTGGCTCTC +
Preference number: 3 (lower is better)
Translates to: DCKETTMVLEWV*RCRPLWLPLAL
Trigger: GAGAGCCAAGGGCAGCCAGAGTGGCCGGCACCTGCAGACCCACTCCAACACCATTGTGGTCTCCTTGCAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR CCA 72 bp TCTCCCAAGTACCCTGCACAGGCTCAGTGGCAGCACTaGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCA +
Preference number: 3 (lower is better)
Translates to: SPKYPAQAQWQH*PLAFPGGSQTP
Trigger: TGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCTGTGCAGGGTACTTGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR CCA 72 bp GAGTCCATCATGTCGATGGCGACATCCTTGGAGGCATaGGACTCTGCCCCCAGAACCACAGCACCACCGCCC +
Preference number: 3 (lower is better)
Translates to: ESIMSMATSLEA*DSAPRTTAPPP
Trigger: GGGCGGTGGTGCTGTGGTTCTGGGGGCAGAGTCCCATGCCTCCAAGGATGTCGCCATCGACATGATGGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR CCA 72 bp GCAGCTGCTGGCTGGTCCGAGAGTCCATCATGTCGATaGCGACATCCTTGGAGGCATGGGACTCTGCCCCCA +
Preference number: 3 (lower is better)
Translates to: AAAGWSESPSCR*RHPWRHGTLPP
Trigger: TGGGGGCAGAGTCCCATGCCTCCAAGGATGTCGCCATCGACATGATGGACTCTCGGACCAGCCAGCAGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR-3UTR CAA 90 bp CCCAGCTGGCCTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAGGCAGCACTGGCCACTaGCCTTCCCAGGAGGGTCCC +
Preference number: 3 (lower is better)
Translates to: PSWPLLPSSHFTAEFKSRGSTGH*PSQEGP
Trigger: GGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCC...TCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAGGCCAGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR TCA 72 bp TCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTaGAGGGCTCAGGGCTCCCTGCCTCACATGGTGAAA +
Preference number: 3 (lower is better)
Translates to: SPAANVRGCAGS*RAQGSLPHMVK
Trigger: TTTCACCATGTGAGGCAGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR GCA 72 bp AAGGAGACCACAATGGTGTTGGAGTGGGTCTGCAGGTaGCGGCCACTCTGGCTGCCCTTGGCTCTCACGAAA +
Preference number: 3 (lower is better)
Translates to: KETTMVLEWVCR*RPLWLPLALTK
Trigger: TTTCGTGAGAGCCAAGGGCAGCCAGAGTGGCCGGCACCTGCAGACCCACTCCAACACCATTGTGGTCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR CCA 72 bp AGTTTCGACTGCAAGGAGACCACAATGGTGTTGGAGTaGGTCTGCAGGTGCCGGCCACTCTGGCTGCCCTTG +
Preference number: 3 (lower is better)
Translates to: SFDCKETTMVLE*VCRCRPLWLPL
Trigger: CAAGGGCAGCCAGAGTGGCCGGCACCTGCAGACCCACTCCAACACCATTGTGGTCTCCTTGCAGTCGAAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR CCA 72 bp AAGCCAGTTTCGACTGCAAGGAGACCACAATGGTGTTaGAGTGGGTCTGCAGGTGCCGGCCACTCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: KPVSTARRPQWC*SGSAGAGHSGC
Trigger: GCAGCCAGAGTGGCCGGCACCTGCAGACCCACTCCAACACCATTGTGGTCTCCTTGCAGTCGAAACTGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR-3UTR CAA 90 bp TGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGGCAGCACTGGCCACTaGCCTTCCCAGGAGGGTCCC +
Preference number: 3 (lower is better)
Translates to: CFLSSLTGRWVRASSPFAGSTGH*PSQEGP
Trigger: GGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCC...AGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CAA 90 bp CAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGCCTCACATGGTCAATTGGGAAAATaGGTCCCTGGGGCTGCTTCC +
Preference number: 3 (lower is better)
Translates to: QCQGLCRQLKGSGLPASHGQLGK*VPGAAS
Trigger: GGAAGCAGCCCCAGGGACCAATTTTCCCAATTGACC...ATGTGAGGCAGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CAA 90 bp CCTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGGCAGCACTGGCCACTaGCCTTCCCAGGAGGGTCCC +
Preference number: 3 (lower is better)
Translates to: PLLPSSHFTAEFKSRTLCGSTGH*PSQEGP
Trigger: GGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCC...ACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CAA 90 bp GTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGAGCACATTTGGCAGATaGAGTCACCAGCAGCCAATG +
Preference number: 3 (lower is better)
Translates to: VAALATCLPRRVPNPNRVSTFGR*SHQQPM
Trigger: CATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCT...CACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR CCA 72 bp GAGGTGACAGACTGGAAGTACTTGAGGATCTCTGAATaGGCGGCCTCAACGTCCAGCTGGGCTCCTAGCACG +
Preference number: 3 (lower is better)
Translates to: EVTDWKYLRISE*AASTSSWAPST
Trigger: CGTGCTAGGAGCCCAGCTGGACGTTGAGGCCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTGTCACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CAA 90 bp AGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCGGTCAATTGGGAAAATaGGTCCCTGGGGCTGCTTCC +
Preference number: 3 (lower is better)
Translates to: RLSHQQPMSGVVQAAEGLGQLGK*VPGAAS
Trigger: GGAAGCAGCCCCAGGGACCAATTTTCCCAATTGACC...GAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CAA 90 bp CAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTCTCCCAAGACCATGAGCCACCGGTaGGAGGTGACAGACTGGAAG +
Preference number: 3 (lower is better)
Translates to: QGQWSFLAVPGKQGLSPKTMSHR*EVTDWK
Trigger: CTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGT...CTTGGGAGAAAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CAA 90 bp GAGTCCATCATGTCGATGGCGACATCCTTGGAGGCATGGGACTCTGCCCCCAGATGCGCTTTGCCAAGATaGTCAGCTTCTCCAGCTTGG +
Preference number: 3 (lower is better)
Translates to: ESIMSMATSLEAWDSAPRCALPR*SASPAW
Trigger: CCAAGCTGGAGAAGCTGACAATCTTGGCAAAGCGCA...TCTGGGGGCAGAGTCCCATGCCTCCAAGGATGTCGCCATCGACATGATGGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR GCA 72 bp ACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTaGTGCCAACGCTTCCTTTGGGAGAGGCTGGAGAGG +
Preference number: 3 (lower is better)
Translates to: THRKVGKGIISL*CQRFLWERLER
Trigger: CCTCTCCAGCCTCTCCCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR GCA 72 bp CTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTaGCTCAGAGTAGAGAGGGTTCAAGCAAGGAAGACC +
Preference number: 3 (lower is better)
Translates to: LAFPGGSQTPTE*LRVERVQARKT
Trigger: GGTCTTCCTTGCTTGAACCCTCTCTACTCTGAGGCACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
3UTR GCA 72 bp ACAGGTGCCCGGGAGAACTGCTCTCTCCGGCTCCTCTaGTGCTTCAGGTTCTCTGTCCTCACTTCTAAAACC +
Preference number: 3 (lower is better)
Translates to: TGARENCSLRLL*CFRFSVLTSKT
Trigger: GGTTTTAGAAGTGAGGACAGAGAACCTGAAGCAGCAGAGGAGCCGGAGAGAGCAGTTCTCCCGGGCACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR-3UTR CAA 90 bp CTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCACCATGAGCCACCGGTaGGAGGTGACAGACTGGAAG +
Preference number: 3 (lower is better)
Translates to: LLPLFTHRKVGKGIISLCTMSHR*EVTDWK
Trigger: CTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGT...GCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CAA 90 bp AGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTTCATCAAAGAGGGACTaGCGCTTTGCCAAGATTGTC +
Preference number: 3 (lower is better)
Translates to: SHQQPMSGVVQAAEGLRASSKRD*RFAKIV
Trigger: GACAATCTTGGCAAAGCGCAAGTCCCTCTTTGATGA...AGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR-3UTR CAA 90 bp ACCATGAGCCACCGGTTGGAGGTGACAGACTGGAAGTACTTGAGGATCTCTGAAACCATGAGCCACCGGTaGGAGGTGACAGACTGGAAG +
Preference number: 3 (lower is better)
Translates to: TMSHRLEVTDWKYLRISETMSHR*EVTDWK
Trigger: CTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGT...TTCAGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CAA 90 bp CACCGGTTGGAGGTGACAGACTGGAAGTACTTGAGGATCTCTGAATGGGCGGCCAGGATGAGGAAGATTTaGACCATGAGCCACCGGTTG +
Preference number: 3 (lower is better)
Translates to: HRLEVTDWKYLRISEWAARMRKI*TMSHRL
Trigger: CAACCGGTGGCTCATGGTCAAAATCTTCCTCATCCT...GGCCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAACCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CAA 90 bp AGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAAACCGATTTGAAGTCATaGGACATAGAAGCCAGTTTC +
Preference number: 3 (lower is better)
Translates to: RLSGSTGHLPSQEGPKPQTDLKS*DIEASF
Trigger: GAAACTGGCTTCTATGTCCAATGACTTCAAATCGGT...TTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR CCA 72 bp ATTTTGACCATGAGCCACCGGTTGGAGGTGACAGACTaGAAGTACTTGAGGATCTCTGAATGGGCGGCCTCA +
Preference number: 3 (lower is better)
Translates to: ILTMSHRLEVTD*KYLRISEWAAS
Trigger: TGAGGCCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGTCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CAA 90 bp TGCTGCCAACGCTTCCTTTGGGAGAGGCTGGAGAGGGTTTATAAAAATCTCCTAGAGACCACAATGGTGTaGGAGTGGGTCTGCAGGTGC +
Preference number: 3 (lower is better)
Translates to: CCQRFLWERLERVYKNLLETTMV*EWVCRC
Trigger: GCACCTGCAGACCCACTCCAACACCATTGTGGTCTC...TAGGAGATTTTTATAAACCCTCTCCAGCCTCTCCCAAAGGAAGCGTTGGCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR-3UTR CAA 90 bp TGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTAGGATGAGGAAGATTTaGACCATGAGCCACCGGTTG +
Preference number: 3 (lower is better)
Translates to: CFLSSLTGRWVRASSPFARMRKI*TMSHRL
Trigger: CAACCGGTGGCTCATGGTCAAAATCTTCCTCATCCT...AGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
3UTR CCA 72 bp TTGTTGGGTGGATGGAAGCAGGTGAACTGGGTCCCATaGGTGGGCAGAATTCACTCTATCTTCCAAAAGGCA +
Preference number: 3 (lower is better)
Translates to: LLGGWKQVNWVP*VGRIHSIFQKA
Trigger: TGCCTTTTGGAAGATAGAGTGAATTCTGCCCACCCATGGGACCCAGTTCACCTGCTTCCATCCACCCAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431400.2
3UTR-3UTR CAA 90 bp TCTTGCTGTAATTGGGAGAAAACGAGCTGCAGCACATTTGGCAGATTGAGTCACGGGCATCATCTCCCTTaGCTGCCAACGCTTCCTTTG +
Preference number: 3 (lower is better)
Translates to: SCCNWEKTSCSTFGRLSHGHHLP*LPTLPL
Trigger: CAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCCC...GTGACTCAATCTGCCAAATGTGCTGCAGCTCGTTTTCTCCCAATTACAGCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294179.8
ENST00000377897.8
3UTR-3UTR CAA 90 bp TCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTAGCCCAACTCAACAATaGTCGACTCAATGTTCTGCA +
Preference number: 3 (lower is better)
Translates to: SSLTGRWVRASSPFAANASPTQQ*STQCSA
Trigger: TGCAGAACATTGAGTCGACAATTGTTGAGTTGGGCT...AGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR TCA 72 bp CTCTGGCTGCCCTTGGCTCTCACGAAATCCTGGAGCTaGGCAATTTGTTTGTTGAGGCTATTGATGTCCTGT +
Preference number: 3 (lower is better)
Translates to: LWLPLALTKSWS*AICLLRLLMSC
Trigger: ACAGGACATCAATAGCCTCAACAAACAAATTGCTCAGCTCCAGGATTTCGTGAGAGCCAAGGGCAGCCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR GCA 72 bp TACAAAGCAGCTCCAGACAGACTTTACTGTTCTACTTaGCACTGTATCTCCCGCACCTGGAACAGTGCCTCA +
Preference number: 3 (lower is better)
Translates to: YKAAPDRLYCST*HCISRTWNSAS
Trigger: TGAGGCACTGTTCCAGGTGCGGGAGATACAGTGGCAAGTAGAACAGTAAAGTCTGTCTGGAGCTGCTTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
3UTR CCA 72 bp AGCCCAACTCAACAATTGTCGACTCAATGTTCTGCATaGTGTCTGCCCGACTCTGGATGTAGGAATCCTGCT +
Preference number: 3 (lower is better)
Translates to: SPTQQLSTQCSA*CLPDSGCRNPA
Trigger: AGCAGGATTCCTACATCCAGAGTCGGGCAGACACCATGCAGAACATTGAGTCGACAATTGTTGAGTTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CAA 90 bp TGCTGCCAACGCTTCCTTTGGGAGAGGCTGGAGAGGGTTTATAAAAATCTCCTAAGCACATTTGGCAGATaGAGTCACCAGCAGCCAATG +
Preference number: 3 (lower is better)
Translates to: CCQRFLWERLERVYKNLLSTFGR*SHQQPM
Trigger: CATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCT...TAGGAGATTTTTATAAACCCTCTCCAGCCTCTCCCAAAGGAAGCGTTGGCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CAA 90 bp AGCAGCTCCAGACAGACTTTACTGTTCTACTTGCCACTGTATCTCCCGCACCTGGTGCTCAATAAAAACTaGTTGGGTGGATGGAAGCAG +
Preference number: 3 (lower is better)
Translates to: SSSRQTLLFYLPLYLPHLVLNKN*LGGWKQ
Trigger: CTGCTTCCATCCACCCAACAAGTTTTTATTGAGCAC...CAGGTGCGGGAGATACAGTGGCAAGTAGAACAGTAAAGTCTGTCTGGAGCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431400.2
3UTR GCA 72 bp CTCAACAATTGTCGACTCAATGTTCTGCATGGTGTCTaGCCGACTCTGGATGTAGGAATCCTGCTCGTCAAT +
Preference number: 3 (lower is better)
Translates to: LNNCRLNVLHGV*PTLDVGILLVN
Trigger: ATTGACGAGCAGGATTCCTACATCCAGAGTCGGGCAGACACCATGCAGAACATTGAGTCGACAATTGTTGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR-3UTR CAA 90 bp CTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTGTTTGTTGAGGCTATaGATGTCCTGTTTGATGATA +
Preference number: 3 (lower is better)
Translates to: LFTHRKVGKGIISLCCQRCLLRL*MSCLMI
Trigger: TATCATCAAACAGGACATCAATAGCCTCAACAAACA...GCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR-3UTR CAA 90 bp TTTGCTGCCAACGCTTCCTTTGGGAGAGGCTGGAGAGGGTTTATAAAAATCTCCAGCCCAACTCAACAATaGTCGACTCAATGTTCTGCA +
Preference number: 3 (lower is better)
Translates to: FAANASFGRGWRGFIKISSPTQQ*STQCSA
Trigger: TGCAGAACATTGAGTCGACAATTGTTGAGTTGGGCT...GGAGATTTTTATAAACCCTCTCCAGCCTCTCCCAAAGGAAGCGTTGGCAGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR TCA 72 bp GTTTCCTCCTGTTCCTTAACCATGTGTGCCAACTGCTaGAAGATGGAGCCCAACTCAACAATTGTCGACTCA +
Preference number: 3 (lower is better)
Translates to: VSSCSLTMCANC*KMEPNSTIVDS
Trigger: TGAGTCGACAATTGTTGAGTTGGGCTCCATCTTTCAGCAGTTGGCACACATGGTTAAGGAACAGGAGGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR GCA 72 bp CCTCTGAATGGTTTCCTCCTGTTCCTTAACCATGTGTaGCAACTGCTGAAAGATGGAGCCCAACTCAACAAT +
Preference number: 3 (lower is better)
Translates to: PLNGFLLFLNHV*QLLKDGAQLNN
Trigger: ATTGTTGAGTTGGGCTCCATCTTTCAGCAGTTGGCACACATGGTTAAGGAACAGGAGGAAACCATTCAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR CCA 72 bp AATAAAAACTTGTTGGGTGGATGGAAGCAGGTGAACTaGGTCCCATGGGTGGGCAGAATTCACTCTATCTTC +
Preference number: 3 (lower is better)
Translates to: NKNLLGGWKQVN*VPWVGRIHSIF
Trigger: GAAGATAGAGTGAATTCTGCCCACCCATGGGACCCAGTTCACCTGCTTCCATCCACCCAACAAGTTTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431400.2
3UTR-3UTR CAA 90 bp TTTGCTGCCAACGCTTCCTTTGGGAGAGGCTGGAGAGGGTTTATAAAAATCTCCCTGGAGCTGAGCAATTaGTTTGTTGAGGCTATTGAT +
Preference number: 3 (lower is better)
Translates to: FAANASFGRGWRGFIKISLELSN*FVEAID
Trigger: ATCAATAGCCTCAACAAACAAATTGCTCAGCTCCAG...GGAGATTTTTATAAACCCTCTCCAGCCTCTCCCAAAGGAAGCGTTGGCAGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR GCA 72 bp CTTCAATTTCCACTGCTTTATCATCAAAGAGGGACTTaGGCTTTGCCAAGATTGTCAGCTTCTCCAGCTTGG +
Preference number: 3 (lower is better)
Translates to: LQFPLLYHQRGT*ALPRLSASPAW
Trigger: CCAAGCTGGAGAAGCTGACAATCTTGGCAAAGCGCAAGTCCCTCTTTGATGATAAAGCAGTGGAAATTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
CDS-3UTR GCA 90 bp GGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACCTCCCCTCTGCCGCCTaGCGCCGCCGCCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: GSVAALATCLPRRVPNPNLPSAA*RRRHFQ
Trigger: TTGGAAGTGGCGGCGGCGGCAGGCGGCAGAGGGGAG...GTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGGAGTGGGTCTGCAGGTaGCGGCCACTCTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QWQHWPLAFPGGSQTPTEEWVCR*RPLWLP
Trigger: GGGCAGCCAGAGTGGCCGGCACCTGCAGACCCACTC...CTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp TGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGCGCACCACCGCCCAGGTaGTTAGGGGCAAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: WQHWPLAFPGGSQTPTECAPPPR*LGARGR
Trigger: CCTGCCCCTTGCCCCTAACCACCTGGGCGGTGGTGC...GCACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000492066.5
CDS-3UTR GCA 90 bp GGTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTCTCCCCTCTGCCGCCTaGCGCCGCCGCCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: GGGSGAVVILSSSRETGPLPSAA*RRRHFQ
Trigger: TTGGAAGTGGCGGCGGCGGCAGGCGGCAGAGGGGAG...AGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGAGTGGGTCTGCAGGTaGCGGCCACTCTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SVAALATCLPRRVPNPNREWVCR*RPLWLP
Trigger: GGGCAGCCAGAGTGGCCGGCACCTGCAGACCCACTC...TCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGCCTCGTGTTGGAGTGGGTCTaGAGGTGCCGGCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: QPMSGVVQAAEGLRAPCLVLEWV*RCRPLW
Trigger: CCAGAGTGGCCGGCACCTGCAGACCCACTCCAACAC...GAGGCAGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGCGGTGCCCGGGAGAACTaGTCTCTCCGGCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: WQHWPLAFPGGSQTPTECGAREN*SLRLLC
Trigger: GCAGAGGAGCCGGAGAGAGCAGTTCTCCCGGGCACC...GCACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp ACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTAGGTGCCGGCCACTCTaGCTGCCCTTGGCTCTCACG +
Preference number: 4 (lower is better)
Translates to: TSSQCQGLCRQLKGSGLPRCRPL*LPLALT
Trigger: CGTGAGAGCCAAGGGCAGCCAGAGTGGCCGGCACCT...AGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCCCTGCACAGGCTCAGTaGCAGCACTGGCCACTTGCC +
Preference number: 4 (lower is better)
Translates to: HQQPMSGVVQAAEGLRAPPAQAQ*QHWPLA
Trigger: GGCAAGTGGCCAGTGCTGCCACTGAGCCTGTGCAGG...GGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CAGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAGCCGGCCACTCTGGCTaGCCTTGGCTCTCACGAAAT +
Preference number: 4 (lower is better)
Translates to: QAQWQHWPLAFPGGSQTPAGHSG*PWLSRN
Trigger: ATTTCGTGAGAGCCAAGGGCAGCCAGAGTGGCCGGC...TGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCGCAGACAGAAACTCCTaGGTCCGATCCCGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: HQQPMSGVVQAAEGLRAPADRNS*VRSRQD
Trigger: GTCCTGCCGGGATCGGACCCAGGAGTTTCTGTCTGC...GGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp TCCCTGGGGCTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCCTCCTCCCCGAGCACTaGAGCCGCCGAAACCCGACC +
Preference number: 4 (lower is better)
Translates to: SLGLLPLFTHRKVGKGIILLPEH*SRRNPT
Trigger: GGTCGGGTTTCGGCGGCTTCAGTGCTCGGGGAGGAG...GATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAGCCCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294179.8
CDS-3UTR GCA 90 bp CAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGCCTCTGTCGCTGCTGCTACTaGCAGCAGTTGCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: QPMSGVVQAAEGLRAPCLCRCCY*QQLQGT
Trigger: TGTCCCCTGCAACTGCTGGCAGTAGCAGCAGCGACA...GAGGCAGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp AGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAAGCCGGCCACTCTGGCTaGCCTTGGCTCTCACGAAAT +
Preference number: 4 (lower is better)
Translates to: RLSGSTGHLPSQEGPKPQAGHSG*PWLSRN
Trigger: ATTTCGTGAGAGCCAAGGGCAGCCAGAGTGGCCGGC...TTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp GTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTGAGTGGGTCTGCAGGTaGCGGCCACTCTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VGDQGQWSFLAVPGKQGLEWVCR*RPLWLP
Trigger: GGGCAGCCAGAGTGGCCGGCACCTGCAGACCCACTC...AAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp GGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACTGCTCGTCAATGAGCTaGAGCTGCTGGCTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: GSVAALATCLPRRVPNPNCSSMS*SCWLVR
Trigger: TCGGACCAGCCAGCAGCTGCAGCTCATTGACGAGCA...GTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGCTCGTCAATGAGCTaGAGCTGCTGGCTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: HQQPMSGVVQAAEGLRAPCSSMS*SCWLVR
Trigger: TCGGACCAGCCAGCAGCTGCAGCTCATTGACGAGCA...GGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACACAATGGTGTTGGAGTaGGTCTGCAGGTGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: GSVAALATCLPRRVPNPNTMVLE*VCRCRP
Trigger: TGGCCGGCACCTGCAGACCCACTCCAACACCATTGT...GTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp ACAGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCATGAGCTGCAGCTGCTaGCTGGTCCGAGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: TGSVAALATCLPRRVPNPMSCSC*LVRESI
Trigger: GATGGACTCTCGGACCAGCCAGCAGCTGCAGCTCAT...GGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp CAGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAGTACTTGAGGATCTCTaGATGGGCGGCCTCAACGTC +
Preference number: 4 (lower is better)
Translates to: QAQWQHWPLAFPGGSQTPVLEDL*MGGLNV
Trigger: GACGTTGAGGCCGCCCATTCAGAGATCCTCAAGTAC...TGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CCCAGCTGGCCTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGACTCCCCTCTGCCGCCTaGCGCCGCCGCCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: PSWPLLPSSHFTAEFKSRLPSAA*RRRHFQ
Trigger: TTGGAAGTGGCGGCGGCGGCAGGCGGCAGAGGGGAG...TCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAGGCCAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp GTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGGCTACTGCCAGCAGTTaGAGGGGACAGGACCTGTGT +
Preference number: 4 (lower is better)
Translates to: VAALATCLPRRVPNPNRVATASS*RGQDLC
Trigger: ACACAGGTCCTGTCCCCTGCAACTGCTGGCAGTAGC...CACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGCTGTCGCTGCTGCTACTaGCAGCAGTTGCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: WQHWPLAFPGGSQTPTECCRCCY*QQLQGT
Trigger: TGTCCCCTGCAACTGCTGGCAGTAGCAGCAGCGACA...GCACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp GTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGTGTCGCTGCTGCTACTaGCAGCAGTTGCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: VAALATCLPRRVPNPNRVCRCCY*QQLQGT
Trigger: TGTCCCCTGCAACTGCTGGCAGTAGCAGCAGCGACA...CACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGAGGGGCGATGTCGCTaGTGCTACTGCCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SVAALATCLPRRVPNPNREGRCR*CYCQQL
Trigger: CAACTGCTGGCAGTAGCAGCAGCGACATCGCCCCTC...TCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp AGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTGCCGGCCACTCTGGCTaGCCTTGGCTCTCACGAAAT +
Preference number: 4 (lower is better)
Translates to: SHQQPMSGVVQAAEGLRAAGHSG*PWLSRN
Trigger: ATTTCGTGAGAGCCAAGGGCAGCCAGAGTGGCCGGC...AGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGTGTTGGAGTGGGTCTaGAGGTGCCGGCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: LSHQQPMSGVVQAAEGLRVLEWV*RCRPLW
Trigger: CCAGAGTGGCCGGCACCTGCAGACCCACTCCAACAC...CCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp AGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCCCAGCTGGCCTCTaGTCCCTTCCAGTCACTTCA +
Preference number: 4 (lower is better)
Translates to: SHQQPMSGVVQAAEGLRAPPAGL*SLPVTS
Trigger: TGAAGTGACTGGAAGGGAGCAGAGGCCAGCTGGGGG...AGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CACCGGTTGGAGGTGACAGACTGGAAGTACTTGAGGATCTCTGAATGGGCGGCCGATCCCGGCAGGACATaGTGTCGGGAGGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: HRLEVTDWKYLRISEWAADPGRT*CREGEG
Trigger: TCCCTCCCCCTCCCGACACCATGTCCTGCCGGGATC...GGCCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAACCGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGCCTCACATGCAGACAGAAACTCCTaGGTCCGATCCCGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: QCQGLCRQLKGSGLPASHADRNS*VRSRQD
Trigger: GTCCTGCCGGGATCGGACCCAGGAGTTTCTGTCTGC...ATGTGAGGCAGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CAGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAAGACCACAATGGTGTTaGAGTGGGTCTGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: QAQWQHWPLAFPGGSQTPRPQWC*SGSAGA
Trigger: GGCACCTGCAGACCCACTCCAACACCATTGTGGTCT...TGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGCCAGACCACAATGGTGTTaGAGTGGGTCTGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: GSTGHLPSQEGPKPQQSARPQWC*SGSAGA
Trigger: GGCACCTGCAGACCCACTCCAACACCATTGTGGTCT...GGCACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp TCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCCGCACCACCGCCCAGGTaGTTAGGGGCAAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLTGRWVRASSPFAANASAPPPR*LGARGR
Trigger: CCTGCCCCTTGCCCCTAACCACCTGGGCGGTGGTGC...GGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000492066.5
CDS-3UTR CCA 90 bp TGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGCACATCCTTGGAGGCATaGGACTCTGCCCCCAGAACC +
Preference number: 4 (lower is better)
Translates to: WQHWPLAFPGGSQTPTECTSLEA*DSAPRT
Trigger: GGTTCTGGGGGCAGAGTCCCATGCCTCCAAGGATGT...GCACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGCCTCACATGCTCAGTGGCAGCACTaGCCACTTGCCTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: QCQGLCRQLKGSGLPASHAQWQH*PLAFPG
Trigger: TCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGC...ATGTGAGGCAGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GGTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTCCTGCACAGGCTCAGTaGCAGCACTGGCCACTTGCC +
Preference number: 4 (lower is better)
Translates to: GGGSGAVVILSSSRETGPPAQAQ*QHWPLA
Trigger: GGCAAGTGGCCAGTGCTGCCACTGAGCCTGTGCAGG...AGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TGTCGACTCAATGTTCTGCATGGTGTCTGCCCGACTCTGGATGTAGGAATCCTGCTCCCCTCTGCCGCCTaGCGCCGCCGCCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: CRLNVLHGVCPTLDVGILLPSAA*RRRHFQ
Trigger: TTGGAAGTGGCGGCGGCGGCAGGCGGCAGAGGGGAG...CAGGATTCCTACATCCAGAGTCGGGCAGACACCATGCAGAACATTGAGTCGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp AGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTGCTACTGCCAGCAGTTaGAGGGGACAGGACCTGTGT +
Preference number: 4 (lower is better)
Translates to: SHQQPMSGVVQAAEGLRAATASS*RGQDLC
Trigger: ACACAGGTCCTGTCCCCTGCAACTGCTGGCAGTAGC...AGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp GGTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTGGGCGATGTCGCTGCTaGTACTGCCAGCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GGGSGAVVILSSSRETGPGRCRC*YCQQLQ
Trigger: CTGCAACTGCTGGCAGTAGCAGCAGCGACATCGCCC...AGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp ACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGGGTCTGCAGCGACTTaGAGGCAGACAGAAACTCCT +
Preference number: 4 (lower is better)
Translates to: TSSQCQGLCRQLKGSGLPGSAAT*RQTETP
Trigger: AGGAGTTTCTGTCTGCCTGCAAGTCGCTGCAGACCC...AGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp AGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAAGGGTCTGCAGCGACTTaGAGGCAGACAGAAACTCCT +
Preference number: 4 (lower is better)
Translates to: RLSGSTGHLPSQEGPKPQGSAAT*RQTETP
Trigger: AGGAGTTTCTGTCTGCCTGCAAGTCGCTGCAGACCC...TTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp ACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTTCTCTCCGGCTCCTCTaGTGCTTCAGGTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: TSSQCQGLCRQLKGSGLPSLRLL*CFRFSV
Trigger: GACAGAGAACCTGAAGCAGCAGAGGAGCCGGAGAGA...AGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTCTCTCCGGCTCCTCTaGTGCTTCAGGTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: QWQHWPLAFPGGSQTPTESLRLL*CFRFSV
Trigger: GACAGAGAACCTGAAGCAGCAGAGGAGCCGGAGAGA...CTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGCCTCGTTCTGCATGGTGTCTaGCCGACTCTGGATGTAGGA +
Preference number: 4 (lower is better)
Translates to: QPMSGVVQAAEGLRAPCLVLHGV*PTLDVG
Trigger: TCCTACATCCAGAGTCGGGCAGACACCATGCAGAAC...GAGGCAGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTTCTCCCAAGTACCCTaGACAGGCTCAGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: QWQHWPLAFPGGSQTPTEFSQVP*TGSVAA
Trigger: TGCTGCCACTGAGCCTGTGCAGGGTACTTGGGAGAA...CTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp GGTCCGAGAGTCCATCATGTCGATGGCGACATCCTTGGAGGCATGGGACTCTGCCCCCCAGCTGGCCTCTaGTCCCTTCCAGTCACTTCA +
Preference number: 4 (lower is better)
Translates to: GPRVHHVDGDILGGMGLCPPAGL*SLPVTS
Trigger: TGAAGTGACTGGAAGGGAGCAGAGGCCAGCTGGGGG...GCAGAGTCCCATGCCTCCAAGGATGTCGCCATCGACATGATGGACTCTCGGACC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000492066.5
CDS-3UTR GCA 90 bp CAGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAATTGGTCCCTGGGGCTaGTTCCTCTCTTCACTCACA +
Preference number: 4 (lower is better)
Translates to: QAQWQHWPLAFPGGSQTPIGPWG*FLSSLT
Trigger: TGTGAGTGAAGAGAGGAAGCAGCCCCAGGGACCAAT...TGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp GTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGCAATGTCAGGGGTTGTaGAGGCAGCTGAAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: VAALATCLPRRVPNPNRVQCQGL*RQLKGS
Trigger: TGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTG...CACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGCAATGTCAGGGGTTGTaGAGGCAGCTGAAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: QWQHWPLAFPGGSQTPTEQCQGL*RQLKGS
Trigger: TGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTG...CTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCCTTTGGGATCCCGGCAGGACATaGTGTCGGGAGGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: HRKVGKGIISLCCQRFLWDPGRT*CREGEG
Trigger: TCCCTCCCCCTCCCGACACCATGTCCTGCCGGGATC...CCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTCTCCCAAGAGGTGCCGGCCACTCTaGCTGCCCTTGGCTCTCACG +
Preference number: 4 (lower is better)
Translates to: QGQWSFLAVPGKQGLSPKRCRPL*LPLALT
Trigger: CGTGAGAGCCAAGGGCAGCCAGAGTGGCCGGCACCT...CTTGGGAGAAAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp TCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCCAGGTGCCGGCCACTCTaGCTGCCCTTGGCTCTCACG +
Preference number: 4 (lower is better)
Translates to: SLTGRWVRASSPFAANASRCRPL*LPLALT
Trigger: CGTGAGAGCCAAGGGCAGCCAGAGTGGCCGGCACCT...GGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp AGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTATGAGCTGCAGCTGCTaGCTGGTCCGAGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: SGSTGHLPSQEGPKPQQSMSCSC*LVRESI
Trigger: GATGGACTCTCGGACCAGCCAGCAGCTGCAGCTCAT...ACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GGTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTGCTCAGTGGCAGCACTaGCCACTTGCCTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GGGSGAVVILSSSRETGPAQWQH*PLAFPG
Trigger: TCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGC...AGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGCCGGGGATCAGGGGCAGTaGTCATTCTTAGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: GSTGHLPSQEGPKPQQSAGDQGQ*SFLAVP
Trigger: TGGAACTGCTAAGAATGACCACTGCCCCTGATCCCC...GGCACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CAGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAGGGGATCAGGGGCAGTaGTCATTCTTAGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: QAQWQHWPLAFPGGSQTPGDQGQ*SFLAVP
Trigger: TGGAACTGCTAAGAATGACCACTGCCCCTGATCCCC...TGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCGGGAAAATTGGTCCCTaGGGCTGCTTCCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: HQQPMSGVVQAAEGLRAPGKIGP*GCFLSS
Trigger: TGAAGAGAGGAAGCAGCCCCAGGGACCAATTTTCCC...GGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GGTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTCGTTCTCGTCGATCCTaGGGACAAGGCCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GGGSGAVVILSSSRETGPRSRRS*GQGREK
Trigger: CTTCTCCCGGCCTTGTCCCCAGGATCGACGAGAACG...AGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377897.8
3UTR CAA 72 bp GAAGCCAGTTTCGACTGCAAGGAGACCACAATGGTGTaGGAGTGGGTCTGCAGGTGCCGGCCACTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: EASFDCKETTMV*EWVCRCRPLWL
Trigger: CAGCCAGAGTGGCCGGCACCTGCAGACCCACTCCAACACCATTGTGGTCTCCTTGCAGTCGAAACTGGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
CDS-3UTR TCA 90 bp CAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGCCTCATGTGTGCCAACTGCTaGAAGATGGAGCCCAACTCA +
Preference number: 4 (lower is better)
Translates to: QPMSGVVQAAEGLRAPCLMCANC*KMEPNS
Trigger: TGAGTTGGGCTCCATCTTTCAGCAGTTGGCACACAT...GAGGCAGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp CACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCATGTGTGCCAACTGCTaGAAGATGGAGCCCAACTCA +
Preference number: 4 (lower is better)
Translates to: HQQPMSGVVQAAEGLRAPMCANC*KMEPNS
Trigger: TGAGTTGGGCTCCATCTTTCAGCAGTTGGCACACAT...GGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp GGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACTTCTCGTCGATCCTCTaGATGGTTTCCTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GSVAALATCLPRRVPNPNFSSIL*MVSSCS
Trigger: GGAACAGGAGGAAACCATTCAGAGGATCGACGAGAA...GTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp AGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGTACTTGAGGATCTCTaGATGGGCGGCCTCAACGTC +
Preference number: 4 (lower is better)
Translates to: SGSTGHLPSQEGPKPQQSVLEDL*MGGLNV
Trigger: GACGTTGAGGCCGCCCATTCAGAGATCCTCAAGTAC...ACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp GTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTGCCGGCCACTCTGGCTaGCCTTGGCTCTCACGAAAT +
Preference number: 4 (lower is better)
Translates to: VGDQGQWSFLAVPGKQGLAGHSG*PWLSRN
Trigger: ATTTCGTGAGAGCCAAGGGCAGCCAGAGTGGCCGGC...AAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp ATCCTGCTCGTCAATGAGCTGCAGCTGCTGGCTGGTCCGAGAGTCCATCATGTCGCCGGCCACTCTGGCTaGCCTTGGCTCTCACGAAAT +
Preference number: 4 (lower is better)
Translates to: ILLVNELQLLAGPRVHHVAGHSG*PWLSRN
Trigger: ATTTCGTGAGAGCCAAGGGCAGCCAGAGTGGCCGGC...GACATGATGGACTCTCGGACCAGCCAGCAGCTGCAGCTCATTGACGAGCAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
CDS-3UTR GCA 90 bp CTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCGTGTTGGAGTGGGTCTaGAGGTGCCGGCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: LFTHRKVGKGIISLCCQRVLEWV*RCRPLW
Trigger: CCAGAGTGGCCGGCACCTGCAGACCCACTCCAACAC...GCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp GGTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTCAATGAGCTGCAGCTaGTGGCTGGTCCGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: GGGSGAVVILSSSRETGPSMSCS*WLVRES
Trigger: GGACTCTCGGACCAGCCAGCAGCTGCAGCTCATTGA...AGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp TCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTGATCCCGGCAGGACATaGTGTCGGGAGGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SSLTGRWVRASSPFAANADPGRT*CREGEG
Trigger: TCCCTCCCCCTCCCGACACCATGTCCTGCCGGGATC...AGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GCAGGTGAACTGGGTCCCATGGGTGGGCAGAATTCACTCTATCTTCCAAAAGGCAGGTGCCGGCCACTCTaGCTGCCCTTGGCTCTCACG +
Preference number: 4 (lower is better)
Translates to: AGELGPMGGQNSLYLPKGRCRPL*LPLALT
Trigger: CGTGAGAGCCAAGGGCAGCCAGAGTGGCCGGCACCT...GCCTTTTGGAAGATAGAGTGAATTCTGCCCACCCATGGGACCCAGTTCACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CCA 90 bp TCTGAATGGGCGGCCTCAACGTCCAGCTGGGCTCCTAGCACGTTCTCGTCGATCAGACCACAATGGTGTTaGAGTGGGTCTGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: SEWAASTSSWAPSTFSSIRPQWC*SGSAGA
Trigger: GGCACCTGCAGACCCACTCCAACACCATTGTGGTCT...GATCGACGAGAACGTGCTAGGAGCCCAGCTGGACGTTGAGGCCGCCCATTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACACTCAATGTTCTGCATaGTGTCTGCCCGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: GSVAALATCLPRRVPNPNTQCSA*CLPDSG
Trigger: TCCAGAGTCGGGCAGACACCATGCAGAACATTGAGT...GTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCACTCAATGTTCTGCATaGTGTCTGCCCGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: HQQPMSGVVQAAEGLRAPTQCSA*CLPDSG
Trigger: TCCAGAGTCGGGCAGACACCATGCAGAACATTGAGT...GGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CCCTGGGGCTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTGCCTCAACGTCCAGCTaGGCTCCTAGCACGTTCTCG +
Preference number: 4 (lower is better)
Translates to: PWGCFLSSLTGRWVRASSASTSS*APSTFS
Trigger: CGAGAACGTGCTAGGAGCCCAGCTGGACGTTGAGGC...AGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAGCCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp AGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTTTGAGGATCTCTGAATaGGCGGCCTCAACGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SGSTGHLPSQEGPKPQQSLRISE*AASTSS
Trigger: GCTGGACGTTGAGGCCGCCCATTCAGAGATCCTCAA...ACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTGCTCAGTGGCAGCACTaGCCACTTGCCTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VGDQGQWSFLAVPGKQGLAQWQH*PLAFPG
Trigger: TCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGC...AAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGGGGAAAATTGGTCCCTaGGGCTGCTTCCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: VAALATCLPRRVPNPNRVGKIGP*GCFLSS
Trigger: TGAAGAGAGGAAGCAGCCCCAGGGACCAATTTTCCC...CACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp ACAGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCGAGCTGCAGCACATTTaGCAGATTGAGTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: TGSVAALATCLPRRVPNPELQHI*QIESPA
Trigger: TGCTGGTGACTCAATCTGCCAAATGTGCTGCAGCTC...GGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
CDS-3UTR TCA 90 bp TTAAAATTAGCTGAGTGGTGCATCCATGTAGTCCCAGCTGCTCAGGAGGCTGAGCTCCTCCCCGAGCACTaGAGCCGCCGAAACCCGACC +
Preference number: 4 (lower is better)
Translates to: LKLAEWCIHVVPAAQEAELLPEH*SRRNPT
Trigger: GGTCGGGTTTCGGCGGCTTCAGTGCTCGGGGAGGAG...CTCAGCCTCCTGAGCAGCTGGGACTACATGGATGCACCACTCAGCTAATTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486437.1
CDS-3UTR TCA 90 bp AGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAATCCTGCTCGTCAATaGGCTGCAGCTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RLSHQQPMSGVVQAAEGLNPARQ*AAAAGW
Trigger: CCAGCCAGCAGCTGCAGCTCATTGACGAGCAGGATT...GAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp AGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAAATGTGTGCCAACTGCTaGAAGATGGAGCCCAACTCA +
Preference number: 4 (lower is better)
Translates to: RLSGSTGHLPSQEGPKPQMCANC*KMEPNS
Trigger: TGAGTTGGGCTCCATCTTTCAGCAGTTGGCACACAT...TTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp GGTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTGTACTTGAGGATCTCTaGATGGGCGGCCTCAACGTC +
Preference number: 4 (lower is better)
Translates to: GGGSGAVVILSSSRETGPVLEDL*MGGLNV
Trigger: GACGTTGAGGCCGCCCATTCAGAGATCCTCAAGTAC...AGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp CAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGCCTCACATCAGACTGGAAGTACTTaGGGATCTCTGAATGGGCGG +
Preference number: 4 (lower is better)
Translates to: QCQGLCRQLKGSGLPASHQTGST*GSLNGR
Trigger: CCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTG...ATGTGAGGCAGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TCCCTGGGGCTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCGCTACTGCCAGCAGTTaGAGGGGACAGGACCTGTGT +
Preference number: 4 (lower is better)
Translates to: SLGLLPLFTHRKVGKGIIATASS*RGQDLC
Trigger: ACACAGGTCCTGTCCCCTGCAACTGCTGGCAGTAGC...GATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAGCCCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCCTTTGGGGGCGATGTCGCTGCTaGTACTGCCAGCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: HRKVGKGIISLCCQRFLWGRCRC*YCQQLQ
Trigger: CTGCAACTGCTGGCAGTAGCAGCAGCGACATCGCCC...CCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TACTGTTCTACTTGCCACTGTATCTCCCGCACCTGGAACAGTGCCTCACATGAAGAGTGGGTCTGCAGGTaGCGGCCACTCTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: YCSTCHCISRTWNSASHEEWVCR*RPLWLP
Trigger: GGGCAGCCAGAGTGGCCGGCACCTGCAGACCCACTC...TTCATGTGAGGCACTGTTCCAGGTGCGGGAGATACAGTGGCAAGTAGAACAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR GCA 90 bp GGTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTCTCTCCGGCTCCTCTaGTGCTTCAGGTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GGGSGAVVILSSSRETGPSLRLL*CFRFSV
Trigger: GACAGAGAACCTGAAGCAGCAGAGGAGCCGGAGAGA...AGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTCTCCCAAGTACCCTGCAGGTGCCCGGGAGAACTaGTCTCTCCGGCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: WSFLAVPGKQGLSPKYPAGAREN*SLRLLC
Trigger: GCAGAGGAGCCGGAGAGAGCAGTTCTCCCGGGCACC...TGCAGGGTACTTGGGAGAAAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGGTGCCCGGGAGAACTaGTCTCTCCGGCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CFLSSLTGRWVRASSPFAGAREN*SLRLLC
Trigger: GCAGAGGAGCCGGAGAGAGCAGTTCTCCCGGGCACC...AGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp ATCCTGCTCGTCAATGAGCTGCAGCTGCTGGCTGGTCCGAGAGTCCATCATGTCTCAATGAGCTGCAGCTaGTGGCTGGTCCGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: ILLVNELQLLAGPRVHHVSMSCS*WLVRES
Trigger: GGACTCTCGGACCAGCCAGCAGCTGCAGCTCATTGA...GACATGATGGACTCTCGGACCAGCCAGCAGCTGCAGCTCATTGACGAGCAGGAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
CDS-3UTR GCA 90 bp CAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGCCTCACATGTCGACTCAATGTTCTaGATGGTGTCTGCCCGACTC +
Preference number: 4 (lower is better)
Translates to: QCQGLCRQLKGSGLPASHVDSMF*MVSARL
Trigger: GAGTCGGGCAGACACCATGCAGAACATTGAGTCGAC...ATGTGAGGCAGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGCCTCACATGGCATCATCTCCCTTTaGTGCCAACGCTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: QCQGLCRQLKGSGLPASHGIISL*CQRFLW
Trigger: CCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCC...ATGTGAGGCAGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCGCAGACAGAAACTCCTaGGTCCGATCCCGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LFTHRKVGKGIISLCCQRADRNS*VRSRQD
Trigger: GTCCTGCCGGGATCGGACCCAGGAGTTTCTGTCTGC...GCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTCTCCCAAGGCAGACAGAAACTCCTaGGTCCGATCCCGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: QGQWSFLAVPGKQGLSPKADRNS*VRSRQD
Trigger: GTCCTGCCGGGATCGGACCCAGGAGTTTCTGTCTGC...CTTGGGAGAAAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGCCGACAGCACGCAAAGCTaGCTTATTTGTCTGGATTCC +
Preference number: 4 (lower is better)
Translates to: GSTGHLPSQEGPKPQQSADSTQS*LICLDS
Trigger: GGAATCCAGACAAATAAGCCAGCTTTGCGTGCTGTC...GGCACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
CDS-3UTR CCA 90 bp CAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGCCTCGACAGCACGCAAAGCTaGCTTATTTGTCTGGATTCC +
Preference number: 4 (lower is better)
Translates to: QPMSGVVQAAEGLRAPCLDSTQS*LICLDS
Trigger: GGAATCCAGACAAATAAGCCAGCTTTGCGTGCTGTC...GAGGCAGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
CDS-3UTR CCA 90 bp AGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCACAATGGTGTTGGAGTaGGTCTGCAGGTGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: RLSHQQPMSGVVQAAEGLTMVLE*VCRCRP
Trigger: TGGCCGGCACCTGCAGACCCACTCCAACACCATTGT...GAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp TCTGAATGGGCGGCCTCAACGTCCAGCTGGGCTCCTAGCACGTTCTCGTCGATCGCAAGGAGACCACAATaGTGTTGGAGTGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SEWAASTSSWAPSTFSSIARRPQ*CWSGSA
Trigger: TGCAGACCCACTCCAACACCATTGTGGTCTCCTTGC...GATCGACGAGAACGTGCTAGGAGCCCAGCTGGACGTTGAGGCCGCCCATTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp AGGCTGGAGAGGGTTTATAAAAATCTCCTAGTGGAAACAACCTCCCCCACTGGCGCACCACCGCCCAGGTaGTTAGGGGCAAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RLERVYKNLLVETTSPTGAPPPR*LGARGR
Trigger: CCTGCCCCTTGCCCCTAACCACCTGGGCGGTGGTGC...GCCAGTGGGGGAGGTTGTTTCCACTAGGAGATTTTTATAAACCCTCTCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000492066.5
CDS-3UTR CCA 90 bp AAAGCAGCTCCAGACAGACTTTACTGTTCTACTTGCCACTGTATCTCCCGCACCGCACCACCGCCCAGGTaGTTAGGGGCAAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KAAPDRLYCSTCHCISRTAPPPR*LGARGR
Trigger: CCTGCCCCTTGCCCCTAACCACCTGGGCGGTGGTGC...GGTGCGGGAGATACAGTGGCAAGTAGAACAGTAAAGTCTGTCTGGAGCTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CCA 90 bp ACAATGAGGATGAGGAAGATTTTGACCATGAGCCACCGGTTGGAGGTGACAGACGCACCACCGCCCAGGTaGTTAGGGGCAAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TMRMRKILTMSHRLEVTDAPPPR*LGARGR
Trigger: CCTGCCCCTTGCCCCTAACCACCTGGGCGGTGGTGC...GTCTGTCACCTCCAACCGGTGGCTCATGGTCAAAATCTTCCTCATCCTCATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377897.8
ENST00000492066.5
CDS-3UTR CCA 90 bp GTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTGCTGCAGCTGCTGGCTaGTCCGAGAGTCCATCATGT +
Preference number: 4 (lower is better)
Translates to: VGDQGQWSFLAVPGKQGLAAAAG*SESPSC
Trigger: ACATGATGGACTCTCGGACCAGCCAGCAGCTGCAGC...AAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GACTGGAAGTACTTGAGGATCTCTGAATGGGCGGCCTCAACGTCCAGCTGGGCTATGAGCTGCAGCTGCTaGCTGGTCCGAGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: DWKYLRISEWAASTSSWAMSCSC*LVRESI
Trigger: GATGGACTCTCGGACCAGCCAGCAGCTGCAGCTCAT...AGCCCAGCTGGACGTTGAGGCCGCCCATTCAGAGATCCTCAAGTACTTCCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GGTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTGAGGATCTCTGAATaGGCGGCCTCAACGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GGGSGAVVILSSSRETGPLRISE*AASTSS
Trigger: GCTGGACGTTGAGGCCGCCCATTCAGAGATCCTCAA...AGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp AGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCGTACTTGAGGATCTCTaGATGGGCGGCCTCAACGTC +
Preference number: 4 (lower is better)
Translates to: RLSHQQPMSGVVQAAEGLVLEDL*MGGLNV
Trigger: GACGTTGAGGCCGCCCATTCAGAGATCCTCAAGTAC...GAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp AGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTGCACATTTGGCAGATTaGGTCACCAGCAGCCAATGT +
Preference number: 4 (lower is better)
Translates to: SHQQPMSGVVQAAEGLRAAHLAD*VTSSQC
Trigger: ACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGC...AGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp AGCACGCAAAGCTGGCTTATTTGTCTGGATTCCATTCTGGGCAACATAGTGAGACTCCCCTCTGCCGCCTaGCGCCGCCGCCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: STQSWLICLDSILGNIVRLPSAA*RRRHFQ
Trigger: TTGGAAGTGGCGGCGGCGGCAGGCGGCAGAGGGGAG...TCTCACTATGTTGCCCAGAATGGAATCCAGACAAATAAGCCAGCTTTGCGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486437.1
CDS-3UTR GCA 90 bp CTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCGCTACTGCCAGCAGTTaGAGGGGACAGGACCTGTGT +
Preference number: 4 (lower is better)
Translates to: LFTHRKVGKGIISLCCQRATASS*RGQDLC
Trigger: ACACAGGTCCTGTCCCCTGCAACTGCTGGCAGTAGC...GCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTGAGGGGCGATGTCGCTaGTGCTACTGCCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SSLTGRWVRASSPFAANAEGRCR*CYCQQL
Trigger: CAACTGCTGGCAGTAGCAGCAGCGACATCGCCCCTC...AGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp AGCACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGAGGGGCGATGTCGCTaGTGCTACTGCCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: STFGRLSHQQPMSGVVQAEGRCR*CYCQQL
Trigger: CAACTGCTGGCAGTAGCAGCAGCGACATCGCCCCTC...TGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGCCTCCATCAAAGAGGGACTTaGGCTTTGCCAAGATTGTCA +
Preference number: 4 (lower is better)
Translates to: QPMSGVVQAAEGLRAPCLHQRGT*ALPRLS
Trigger: TGACAATCTTGGCAAAGCGCAAGTCCCTCTTTGATG...GAGGCAGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp GACTTTACTGTTCTACTTGCCACTGTATCTCCCGCACCTGGAACAGTGCCTCACGTGTTGGAGTGGGTCTaGAGGTGCCGGCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: DFTVLLATVSPAPGTVPHVLEWV*RCRPLW
Trigger: CCAGAGTGGCCGGCACCTGCAGACCCACTCCAACAC...GTGAGGCACTGTTCCAGGTGCGGGAGATACAGTGGCAAGTAGAACAGTAAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR GCA 90 bp CTGGAGAGGGTTTATAAAAATCTCCTAGTGGAAACAACCTCCCCCACTGGCCCCGTGTTGGAGTGGGTCTaGAGGTGCCGGCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: LERVYKNLLVETTSPTGPVLEWV*RCRPLW
Trigger: CCAGAGTGGCCGGCACCTGCAGACCCACTCCAACAC...GGGGCCAGTGGGGGAGGTTGTTTCCACTAGGAGATTTTTATAAACCCTCTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CAAAGCAGCTCCAGACAGACTTTACTGTTCTACTTGCCACTGTATCTCCCGCACGGTGCCCGGGAGAACTaGTCTCTCCGGCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: QSSSRQTLLFYLPLYLPHGAREN*SLRLLC
Trigger: GCAGAGGAGCCGGAGAGAGCAGTTCTCCCGGGCACC...GTGCGGGAGATACAGTGGCAAGTAGAACAGTAAAGTCTGTCTGGAGCTGCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR GCA 90 bp ACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCCTTTGGGTCAATGAGCTGCAGCTaGTGGCTGGTCCGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: TGRWVRASSPFAANASFGSMSCS*WLVRES
Trigger: GGACTCTCGGACCAGCCAGCAGCTGCAGCTCATTGA...CCCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGTTCTGCATGGTGTCTaGCCGACTCTGGATGTAGGA +
Preference number: 4 (lower is better)
Translates to: LSHQQPMSGVVQAAEGLRVLHGV*PTLDVG
Trigger: TCCTACATCCAGAGTCGGGCAGACACCATGCAGAAC...CCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TTGAGGATCTCTGAATGGGCGGCCTCAACGTCCAGCTGGGCTCCTAGCACGTTCGTCGACTCAATGTTCTaGATGGTGTCTGCCCGACTC +
Preference number: 4 (lower is better)
Translates to: LRISEWAASTSSWAPSTFVDSMF*MVSARL
Trigger: GAGTCGGGCAGACACCATGCAGAACATTGAGTCGAC...GAACGTGCTAGGAGCCCAGCTGGACGTTGAGGCCGCCCATTCAGAGATCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACCCCCCAGCTGGCCTCTaGTCCCTTCCAGTCACTTCA +
Preference number: 4 (lower is better)
Translates to: LSSLTGRWVRASSPFAANPPAGL*SLPVTS
Trigger: TGAAGTGACTGGAAGGGAGCAGAGGCCAGCTGGGGG...GTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TTGGAGGTGACAGACTGGAAGTACTTGAGGATCTCTGAATGGGCGGCCTCAACGCCCCCAGCTGGCCTCTaGTCCCTTCCAGTCACTTCA +
Preference number: 4 (lower is better)
Translates to: LEVTDWKYLRISEWAASTPPAGL*SLPVTS
Trigger: TGAAGTGACTGGAAGGGAGCAGAGGCCAGCTGGGGG...CGTTGAGGCCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp AGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTATCATCTCCCTTTGCTaGCAACGCTTCCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SHQQPMSGVVQAAEGLRAIISLC*QRFLWE
Trigger: CTCCCAAAGGAAGCGTTGGCAGCAAAGGGAGATGAT...AGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp GGTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTGGCATCATCTCCCTTTaGTGCCAACGCTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: GGGSGAVVILSSSRETGPGIISL*CQRFLW
Trigger: CCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCC...AGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp AGGCTGGAGAGGGTTTATAAAAATCTCCTAGTGGAAACAACCTCCCCCACTGGCAGGTGCCGGCCACTCTaGCTGCCCTTGGCTCTCACG +
Preference number: 4 (lower is better)
Translates to: RLERVYKNLLVETTSPTGRCRPL*LPLALT
Trigger: CGTGAGAGCCAAGGGCAGCCAGAGTGGCCGGCACCT...GCCAGTGGGGGAGGTTGTTTCCACTAGGAGATTTTTATAAACCCTCTCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp TTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCAAGGAGACCACAATaGTGTTGGAGTGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LSHQQPMSGVVQAAEGLRARRPQ*CWSGSA
Trigger: TGCAGACCCACTCCAACACCATTGTGGTCTCCTTGC...CCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CTGGCTGGTCCGAGAGTCCATCATGTCGATGGCGACATCCTTGGAGGCATGGGAGCAAGGAGACCACAATaGTGTTGGAGTGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LAGPRVHHVDGDILGGMGARRPQ*CWSGSA
Trigger: TGCAGACCCACTCCAACACCATTGTGGTCTCCTTGC...TCCCATGCCTCCAAGGATGTCGCCATCGACATGATGGACTCTCGGACCAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
CDS-3UTR CCA 90 bp CACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCACATCCTTGGAGGCATaGGACTCTGCCCCCAGAACC +
Preference number: 4 (lower is better)
Translates to: HIWQIESPAANVRGCAGSTSLEA*DSAPRT
Trigger: GGTTCTGGGGGCAGAGTCCCATGCCTCCAAGGATGT...GCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp AGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTAGTCCATCATGTCGATaGCGACATCCTTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: SGSTGHLPSQEGPKPQQSSPSCR*RHPWRH
Trigger: ATGCCTCCAAGGATGTCGCCATCGACATGATGGACT...ACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCGCTGCAGCTGCTGGCTaGTCCGAGAGTCCATCATGT +
Preference number: 4 (lower is better)
Translates to: LFTHRKVGKGIISLCCQRAAAAG*SESPSC
Trigger: ACATGATGGACTCTCGGACCAGCCAGCAGCTGCAGC...GCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCCCAACTGCTGAAAGATaGAGCCCAACTCAACAATTG +
Preference number: 4 (lower is better)
Translates to: HQQPMSGVVQAAEGLRAPPTAER*SPTQQL
Trigger: CAATTGTTGAGTTGGGCTCCATCTTTCAGCAGTTGG...GGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp TCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTGCCTCAACGTCCAGCTaGGCTCCTAGCACGTTCTCG +
Preference number: 4 (lower is better)
Translates to: SSLTGRWVRASSPFAANAASTSS*APSTFS
Trigger: CGAGAACGTGCTAGGAGCCCAGCTGGACGTTGAGGC...AGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GACTGGAAGTACTTGAGGATCTCTGAATGGGCGGCCTCAACGTCCAGCTGGGCTTTGAGGATCTCTGAATaGGCGGCCTCAACGTCCAGC +
Preference number: 4 (lower is better)
Translates to: DWKYLRISEWAASTSSWALRISE*AASTSS
Trigger: GCTGGACGTTGAGGCCGCCCATTCAGAGATCCTCAA...AGCCCAGCTGGACGTTGAGGCCGCCCATTCAGAGATCCTCAAGTACTTCCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCAAGAAAGAGGTCAATTaGGAAAATTGGTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HQQPMSGVVQAAEGLRAPKKEVN*ENWSLG
Trigger: CCCCAGGGACCAATTTTCCCAATTGACCTCTTTCTT...GGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CAGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAAAGAAAGAGGTCAATTaGGAAAATTGGTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QAQWQHWPLAFPGGSQTPKKEVN*ENWSLG
Trigger: CCCCAGGGACCAATTTTCCCAATTGACCTCTTTCTT...TGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTGTGACTTACCCAGGTaGTTAGGGGCAAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LFTHRKVGKGIISLCCQRCDLPR*LGARGR
Trigger: CCTGCCCCTTGCCCCTAACCACCTGGGTAAGTCACA...GCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491231.5
CDS-3UTR TCA 90 bp TGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGCACGAAATCCTGGAGCTaGGCAATTTGTTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: WQHWPLAFPGGSQTPTECTKSWS*AICLLR
Trigger: CCTCAACAAACAAATTGCTCAGCTCCAGGATTTCGT...GCACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp CACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCCTTTGGGTACTTGAGGATCTCTaGATGGGCGGCCTCAACGTC +
Preference number: 4 (lower is better)
Translates to: HRKVGKGIISLCCQRFLWVLEDL*MGGLNV
Trigger: GACGTTGAGGCCGCCCATTCAGAGATCCTCAAGTAC...CCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp CCCTGGGGCTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCAGACTGGAAGTACTTaGGGATCTCTGAATGGGCGG +
Preference number: 4 (lower is better)
Translates to: PWGCFLSSLTGRWVRASSQTGST*GSLNGR
Trigger: CCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTG...AGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAGCCCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp ACCATGAGCCACCGGTTGGAGGTGACAGACTGGAAGTACTTGAGGATCTCTGAACAGCACCACCGCCTGTaGCTTACCCAGGTGGTTAGG +
Preference number: 4 (lower is better)
Translates to: TMSHRLEVTDWKYLRISEQHHRL*LTQVVR
Trigger: CCTAACCACCTGGGTAAGTCACAGGCGGTGGTGCTG...TTCAGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491231.5
CDS-3UTR GCA 90 bp TGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGGGCGATGTCGCTGCTaGTACTGCCAGCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: CFLSSLTGRWVRASSPFAGRCRC*YCQQLQ
Trigger: CTGCAACTGCTGGCAGTAGCAGCAGCGACATCGCCC...AGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TGTCGACTCAATGTTCTGCATGGTGTCTGCCCGACTCTGGATGTAGGAATCCTGGGGCGATGTCGCTGCTaGTACTGCCAGCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: CRLNVLHGVCPTLDVGILGRCRC*YCQQLQ
Trigger: CTGCAACTGCTGGCAGTAGCAGCAGCGACATCGCCC...CAGGATTCCTACATCCAGAGTCGGGCAGACACCATGCAGAACATTGAGTCGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CTGGAGAGGGTTTATAAAAATCTCCTAGTGGAAACAACCTCCCCCACTGGCCCCGAGGGGCGATGTCGCTaGTGCTACTGCCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LERVYKNLLVETTSPTGPEGRCR*CYCQQL
Trigger: CAACTGCTGGCAGTAGCAGCAGCGACATCGCCCCTC...GGGGCCAGTGGGGGAGGTTGTTTCCACTAGGAGATTTTTATAAACCCTCTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCCTTTGGGGGTCTGCAGCGACTTaGAGGCAGACAGAAACTCCT +
Preference number: 4 (lower is better)
Translates to: HRKVGKGIISLCCQRFLWGSAAT*RQTETP
Trigger: AGGAGTTTCTGTCTGCCTGCAAGTCGCTGCAGACCC...CCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCGGGTCTGCAGCGACTTaGAGGCAGACAGAAACTCCT +
Preference number: 4 (lower is better)
Translates to: LFTHRKVGKGIISLCCQRGSAAT*RQTETP
Trigger: AGGAGTTTCTGTCTGCCTGCAAGTCGCTGCAGACCC...GCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGCATCAAAGAGGGACTTaGGCTTTGCCAAGATTGTCA +
Preference number: 4 (lower is better)
Translates to: QWQHWPLAFPGGSQTPTEHQRGT*ALPRLS
Trigger: TGACAATCTTGGCAAAGCGCAAGTCCCTCTTTGATG...CTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGAAGCCAGTTTCGACTaGAAGGAGACCACAATGGTG +
Preference number: 4 (lower is better)
Translates to: LSHQQPMSGVVQAAEGLREASFD*KETTMV
Trigger: CACCATTGTGGTCTCCTTGCAGTCGAAACTGGCTTC...CCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CTTCGACGCTCCCACCCAGAAATGATGACATGGCTAGTGAGGCTGACAGTCTTGTCAATGAGCTGCAGCTaGTGGCTGGTCCGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: LRRSHPEMMTWLVRLTVLSMSCS*WLVRES
Trigger: GGACTCTCGGACCAGCCAGCAGCTGCAGCTCATTGA...CAAGACTGTCAGCCTCACTAGCCATGTCATCATTTCTGGGTGGGAGCGTCGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294179.8
CDS-3UTR GCA 90 bp AAAAACTTGTTGGGTGGATGGAAGCAGGTGAACTGGGTCCCATGGGTGGGCAGATGCTCGTCAATGAGCTaGAGCTGCTGGCTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: KNLLGGWKQVNWVPWVGRCSSMS*SCWLVR
Trigger: TCGGACCAGCCAGCAGCTGCAGCTCATTGACGAGCA...TCTGCCCACCCATGGGACCCAGTTCACCTGCTTCCATCCACCCAACAAGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR GCA 90 bp GTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTGTTCTGCATGGTGTCTaGCCGACTCTGGATGTAGGA +
Preference number: 4 (lower is better)
Translates to: VGDQGQWSFLAVPGKQGLVLHGV*PTLDVG
Trigger: TCCTACATCCAGAGTCGGGCAGACACCATGCAGAAC...AAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CACCGGTTGGAGGTGACAGACTGGAAGTACTTGAGGATCTCTGAATGGGCGGCCGTTCTGCATGGTGTCTaGCCGACTCTGGATGTAGGA +
Preference number: 4 (lower is better)
Translates to: HRLEVTDWKYLRISEWAAVLHGV*PTLDVG
Trigger: TCCTACATCCAGAGTCGGGCAGACACCATGCAGAAC...GGCCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAACCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp AGAGTCCATCATGTCGATGGCGACATCCTTGGAGGCATGGGACTCTGCCCCCAGATCATCTCCCTTTGCTaGCAACGCTTCCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: RVHHVDGDILGGMGLCPQIISLC*QRFLWE
Trigger: CTCCCAAAGGAAGCGTTGGCAGCAAAGGGAGATGAT...CTGGGGGCAGAGTCCCATGCCTCCAAGGATGTCGCCATCGACATGATGGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492066.5
CDS-3UTR CCA 90 bp AGAGGATCCCTTGAGTCTAGGAGTTCAAGACTGCAAGTGAGCTATCATCACACCGATCCCGGCAGGACATaGTGTCGGGAGGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: RGSLESRSSRLQVSYHHTDPGRT*CREGEG
Trigger: TCCCTCCCCCTCCCGACACCATGTCCTGCCGGGATC...GGTGTGATGATAGCTCACTTGCAGTCTTGAACTCCTAGACTCAAGGGATCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486437.1
CDS-3UTR CCA 90 bp CCCAGCTGGCCTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACAATGGTGTTGGAGTaGGTCTGCAGGTGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: PSWPLLPSSHFTAEFKSRTMVLE*VCRCRP
Trigger: TGGCCGGCACCTGCAGACCCACTCCAACACCATTGT...TCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAGGCCAGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTCTCCCAAGTAACAATGGTGTTGGAGTaGGTCTGCAGGTGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: GAVVILSSSRETGPFSQVTMVLE*VCRCRP
Trigger: TGGCCGGCACCTGCAGACCCACTCCAACACCATTGT...TACTTGGGAGAAAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp AGCACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAACATCCTTGGAGGCATaGGACTCTGCCCCCAGAACC +
Preference number: 4 (lower is better)
Translates to: STFGRLSHQQPMSGVVQATSLEA*DSAPRT
Trigger: GGTTCTGGGGGCAGAGTCCCATGCCTCCAAGGATGT...TGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACACATCCTTGGAGGCATaGGACTCTGCCCCCAGAACC +
Preference number: 4 (lower is better)
Translates to: LSSLTGRWVRASSPFAANTSLEA*DSAPRT
Trigger: GGTTCTGGGGGCAGAGTCCCATGCCTCCAAGGATGT...GTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp AAAAACTTGTTGGGTGGATGGAAGCAGGTGAACTGGGTCCCATGGGTGGGCAGAACATCCTTGGAGGCATaGGACTCTGCCCCCAGAACC +
Preference number: 4 (lower is better)
Translates to: KNLLGGWKQVNWVPWVGRTSLEA*DSAPRT
Trigger: GGTTCTGGGGGCAGAGTCCCATGCCTCCAAGGATGT...TCTGCCCACCCATGGGACCCAGTTCACCTGCTTCCATCCACCCAACAAGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CCA 90 bp CCCAGCTGGCCTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAGCTGCAGCTGCTGGCTaGTCCGAGAGTCCATCATGT +
Preference number: 4 (lower is better)
Translates to: PSWPLLPSSHFTAEFKSRAAAAG*SESPSC
Trigger: ACATGATGGACTCTCGGACCAGCCAGCAGCTGCAGC...TCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAGGCCAGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GGATGGAAGCAGGTGAACTGGGTCCCATGGGTGGGCAGAATTCACTCTATCTTCATGAGCTGCAGCTGCTaGCTGGTCCGAGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: GWKQVNWVPWVGRIHSIFMSCSC*LVRESI
Trigger: GATGGACTCTCGGACCAGCCAGCAGCTGCAGCTCAT...GAAGATAGAGTGAATTCTGCCCACCCATGGGACCCAGTTCACCTGCTTCCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CCA 90 bp CTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACATGAGCTGCAGCTGCTaGCTGGTCCGAGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: LSSLTGRWVRASSPFAANMSCSC*LVRESI
Trigger: GATGGACTCTCGGACCAGCCAGCAGCTGCAGCTCAT...GTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp ACCATGAGCCACCGGTTGGAGGTGACAGACTGGAAGTACTTGAGGATCTCTGAAGCCTCAACGTCCAGCTaGGCTCCTAGCACGTTCTCG +
Preference number: 4 (lower is better)
Translates to: TMSHRLEVTDWKYLRISEASTSS*APSTFS
Trigger: CGAGAACGTGCTAGGAGCCCAGCTGGACGTTGAGGC...TTCAGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp AGGCTGGAGAGGGTTTATAAAAATCTCCTAGTGGAAACAACCTCCCCCACTGGCCCTGCACAGGCTCAGTaGCAGCACTGGCCACTTGCC +
Preference number: 4 (lower is better)
Translates to: RLERVYKNLLVETTSPTGPAQAQ*QHWPLA
Trigger: GGCAAGTGGCCAGTGCTGCCACTGAGCCTGTGCAGG...GCCAGTGGGGGAGGTTGTTTCCACTAGGAGATTTTTATAAACCCTCTCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp GTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTATGTGTGCCAACTGCTaGAAGATGGAGCCCAACTCA +
Preference number: 4 (lower is better)
Translates to: VGDQGQWSFLAVPGKQGLMCANC*KMEPNS
Trigger: TGAGTTGGGCTCCATCTTTCAGCAGTTGGCACACAT...AAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp GTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTGCACATTTGGCAGATTaGGTCACCAGCAGCCAATGT +
Preference number: 4 (lower is better)
Translates to: VGDQGQWSFLAVPGKQGLAHLAD*VTSSQC
Trigger: ACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGC...AAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTGGGTCTGCAGCGACTTaGAGGCAGACAGAAACTCCT +
Preference number: 4 (lower is better)
Translates to: SSLTGRWVRASSPFAANAGSAAT*RQTETP
Trigger: AGGAGTTTCTGTCTGCCTGCAAGTCGCTGCAGACCC...AGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp GAAGCAGGTGAACTGGGTCCCATGGGTGGGCAGAATTCACTCTATCTTCCAAAAGCCGGCCACTCTGGCTaGCCTTGGCTCTCACGAAAT +
Preference number: 4 (lower is better)
Translates to: EAGELGPMGGQNSLYLPKAGHSG*PWLSRN
Trigger: ATTTCGTGAGAGCCAAGGGCAGCCAGAGTGGCCGGC...TTTTGGAAGATAGAGTGAATTCTGCCCACCCATGGGACCCAGTTCACCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR GCA 90 bp CGATTTGAAGTCATTGGACATAGAAGCCAGTTTCGACTGCAAGGAGACCACAATGAGTGGGTCTGCAGGTaGCGGCCACTCTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RFEVIGHRSQFRLQGDHNEWVCR*RPLWLP
Trigger: GGGCAGCCAGAGTGGCCGGCACCTGCAGACCCACTC...ATTGTGGTCTCCTTGCAGTCGAAACTGGCTTCTATGTCCAATGACTTCAAATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
CDS-3UTR GCA 90 bp GACTGGAAGTACTTGAGGATCTCTGAATGGGCGGCCTCAACGTCCAGCTGGGCTGAAGCCAGTTTCGACTaGAAGGAGACCACAATGGTG +
Preference number: 4 (lower is better)
Translates to: DWKYLRISEWAASTSSWAEASFD*KETTMV
Trigger: CACCATTGTGGTCTCCTTGCAGTCGAAACTGGCTTC...AGCCCAGCTGGACGTTGAGGCCGCCCATTCAGAGATCCTCAAGTACTTCCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTCTCTCCGGCTCCTCTaGTGCTTCAGGTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LLPLFTHRKVGKGIISLCSLRLL*CFRFSV
Trigger: GACAGAGAACCTGAAGCAGCAGAGGAGCCGGAGAGA...GCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTTGGTGCCCGGGAGAACTaGTCTCTCCGGCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CSLPVTSQQSSNLEPCVFGAREN*SLRLLC
Trigger: GCAGAGGAGCCGGAGAGAGCAGTTCTCCCGGGCACC...AAACACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp GGAGAAAACGAGCTGCAGCACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCTGCTCGTCAATGAGCTaGAGCTGCTGGCTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: GENELQHIWQIESPAANVCSSMS*SCWLVR
Trigger: TCGGACCAGCCAGCAGCTGCAGCTCATTGACGAGCA...GACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCTGCAGCTCGTTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294179.8
ENST00000377897.8
CDS-3UTR GCA 90 bp CTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCGTCGACTCAATGTTCTaGATGGTGTCTGCCCGACTC +
Preference number: 4 (lower is better)
Translates to: LFTHRKVGKGIISLCCQRVDSMF*MVSARL
Trigger: GAGTCGGGCAGACACCATGCAGAACATTGAGTCGAC...GCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp ACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTTTCCTTAACCATGTGTaGCAACTGCTGAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: TSSQCQGLCRQLKGSGLPFLNHV*QLLKDG
Trigger: TCCATCTTTCAGCAGTTGGCACACATGGTTAAGGAA...AGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp GGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTCTCCCAAGTATTCTCCCAAGTACCCTaGACAGGCTCAGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GAVVILSSSRETGPFSQVFSQVP*TGSVAA
Trigger: TGCTGCCACTGAGCCTGTGCAGGGTACTTGGGAGAA...TACTTGGGAGAAAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTTCTCCCAAGTACCCTaGACAGGCTCAGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LLPLFTHRKVGKGIISLCFSQVP*TGSVAA
Trigger: TGCTGCCACTGAGCCTGTGCAGGGTACTTGGGAGAA...GCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp AGGAAGATTTTGACCATGAGCCACCGGTTGGAGGTGACAGACTGGAAGTACTTGCCCCCAGCTGGCCTCTaGTCCCTTCCAGTCACTTCA +
Preference number: 4 (lower is better)
Translates to: RKILTMSHRLEVTDWKYLPPAGL*SLPVTS
Trigger: TGAAGTGACTGGAAGGGAGCAGAGGCCAGCTGGGGG...CAAGTACTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGTCAAAATCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp TGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTTGATCCCGGCAGGACATaGTGTCGGGAGGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: CSLPVTSQQSSNLEPCVFDPGRT*CREGEG
Trigger: TCCCTCCCCCTCCCGACACCATGTCCTGCCGGGATC...AAACACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CCTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGCAGACAGAAACTCCTaGGTCCGATCCCGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PLLPSSHFTAEFKSRTLCADRNS*VRSRQD
Trigger: GTCCTGCCGGGATCGGACCCAGGAGTTTCTGTCTGC...ACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GACTTTACTGTTCTACTTGCCACTGTATCTCCCGCACCTGGAACAGTGCCTCACACAATGGTGTTGGAGTaGGTCTGCAGGTGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: DFTVLLATVSPAPGTVPHTMVLE*VCRCRP
Trigger: TGGCCGGCACCTGCAGACCCACTCCAACACCATTGT...GTGAGGCACTGTTCCAGGTGCGGGAGATACAGTGGCAAGTAGAACAGTAAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CCA 90 bp AGCACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAAGACCACAATGGTGTTaGAGTGGGTCTGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: STFGRLSHQQPMSGVVQARPQWC*SGSAGA
Trigger: GGCACCTGCAGACCCACTCCAACACCATTGTGGTCT...TGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCGCAAGGAGACCACAATaGTGTTGGAGTGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LFTHRKVGKGIISLCCQRARRPQ*CWSGSA
Trigger: TGCAGACCCACTCCAACACCATTGTGGTCTCCTTGC...GCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CACCGGTTGGAGGTGACAGACTGGAAGTACTTGAGGATCTCTGAATGGGCGGCCAGTCCATCATGTCGATaGCGACATCCTTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: HRLEVTDWKYLRISEWAASPSCR*RHPWRH
Trigger: ATGCCTCCAAGGATGTCGCCATCGACATGATGGACT...GGCCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAACCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp TGTTCTACTTGCCACTGTATCTCCCGCACCTGGAACAGTGCCTCACATGAACAGGCTGCAGCTGCTGGCTaGTCCGAGAGTCCATCATGT +
Preference number: 4 (lower is better)
Translates to: CSTCHCISRTWNSASHEQAAAAG*SESPSC
Trigger: ACATGATGGACTCTCGGACCAGCCAGCAGCTGCAGC...CTGTTCATGTGAGGCACTGTTCCAGGTGCGGGAGATACAGTGGCAAGTAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CCA 90 bp TCCCTGGGGCTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCACTCAATGTTCTGCATaGTGTCTGCCCGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: SLGLLPLFTHRKVGKGIITQCSA*CLPDSG
Trigger: TCCAGAGTCGGGCAGACACCATGCAGAACATTGAGT...GATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAGCCCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GATTTTGACCATGAGCCACCGGTTGGAGGTGACAGACTGGAAGTACTTGAGGATGCCTCAACGTCCAGCTaGGCTCCTAGCACGTTCTCG +
Preference number: 4 (lower is better)
Translates to: DFDHEPPVGGDRLEVLEDASTSS*APSTFS
Trigger: CGAGAACGTGCTAGGAGCCCAGCTGGACGTTGAGGC...ATCCTCAAGTACTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGTCAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp ATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTCTCCCAAGTACCCTGCACAGGCTTGAGGATCTCTGAATaGGCGGCCTCAACGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ILSSSRETGPFSQVPCTGLRISE*AASTSS
Trigger: GCTGGACGTTGAGGCCGCCCATTCAGAGATCCTCAA...GCCTGTGCAGGGTACTTGGGAGAAAGGCCCTGTTTCCCTGGAACTGCTAAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp TTTGCTGCCAACGCTTCCTTTGGGAGAGGCTGGAGAGGGTTTATAAAAATCTCCCCTGCACAGGCTCAGTaGCAGCACTGGCCACTTGCC +
Preference number: 4 (lower is better)
Translates to: FAANASFGRGWRGFIKISPAQAQ*QHWPLA
Trigger: GGCAAGTGGCCAGTGCTGCCACTGAGCCTGTGCAGG...GGAGATTTTTATAAACCCTCTCCAGCCTCTCCCAAAGGAAGCGTTGGCAGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp TCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAAAGAAAGAGGTCAATTaGGAAAATTGGTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SVAALATCLPRRVPNPNRKKEVN*ENWSLG
Trigger: CCCCAGGGACCAATTTTCCCAATTGACCTCTTTCTT...TCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GGTGGATGGAAGCAGGTGAACTGGGTCCCATGGGTGGGCAGAATTCACTCTATCGTGAACTGGGTCCCATaGGTGGGCAGAATTCACTCT +
Preference number: 4 (lower is better)
Translates to: GGWKQVNWVPWVGRIHSIVNWVP*VGRIHS
Trigger: AGAGTGAATTCTGCCCACCCATGGGACCCAGTTCAC...GATAGAGTGAATTCTGCCCACCCATGGGACCCAGTTCACCTGCTTCCATCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR TCA 90 bp AGGAAGATTTTGACCATGAGCCACCGGTTGGAGGTGACAGACTGGAAGTACTTGAATCCTGCTCGTCAATaGGCTGCAGCTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RKILTMSHRLEVTDWKYLNPARQ*AAAAGW
Trigger: CCAGCCAGCAGCTGCAGCTCATTGACGAGCAGGATT...CAAGTACTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGTCAAAATCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp GAACTGGGTCCCATGGGTGGGCAGAATTCACTCTATCTTCCAAAAGGCATCAAGAATCCTGCTCGTCAATaGGCTGCAGCTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ELGPMGGQNSLYLPKGIKNPARQ*AAAAGW
Trigger: CCAGCCAGCAGCTGCAGCTCATTGACGAGCAGGATT...CTTGATGCCTTTTGGAAGATAGAGTGAATTCTGCCCACCCATGGGACCCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR TCA 90 bp CACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCCTTTGGGCACATTTGGCAGATTaGGTCACCAGCAGCCAATGT +
Preference number: 4 (lower is better)
Translates to: HRKVGKGIISLCCQRFLWAHLAD*VTSSQC
Trigger: ACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGC...CCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp GGTGGGCAGAATTCACTCTATCTTCCAAAAGGCATCAAGCAGTCCCTGGGGACTTCTCTCCGGCTCCTCTaGTGCTTCAGGTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GGQNSLYLPKGIKQSLGTSLRLL*CFRFSV
Trigger: GACAGAGAACCTGAAGCAGCAGAGGAGCCGGAGAGA...AGTCCCCAGGGACTGCTTGATGCCTTTTGGAAGATAGAGTGAATTCTGCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR GCA 90 bp CTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTCAATGAGCTGCAGCTaGTGGCTGGTCCGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: LCSLPVTSQQSSNLEPCVSMSCS*WLVRES
Trigger: GGACTCTCGGACCAGCCAGCAGCTGCAGCTCATTGA...CACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp ACAATGAGGATGAGGAAGATTTTGACCATGAGCCACCGGTTGGAGGTGACAGACTGCTCGTCAATGAGCTaGAGCTGCTGGCTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: TMRMRKILTMSHRLEVTDCSSMS*SCWLVR
Trigger: TCGGACCAGCCAGCAGCTGCAGCTCATTGACGAGCA...GTCTGTCACCTCCAACCGGTGGCTCATGGTCAAAATCTTCCTCATCCTCATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp GATTTTGACCATGAGCCACCGGTTGGAGGTGACAGACTGGAAGTACTTGAGGATTGCTCGTCAATGAGCTaGAGCTGCTGGCTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: DFDHEPPVGGDRLEVLEDCSSMS*SCWLVR
Trigger: TCGGACCAGCCAGCAGCTGCAGCTCATTGACGAGCA...ATCCTCAAGTACTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGTCAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CTTCGACGCTCCCACCCAGAAATGATGACATGGCTAGTGAGGCTGACAGTCTTGGTCGACTCAATGTTCTaGATGGTGTCTGCCCGACTC +
Preference number: 4 (lower is better)
Translates to: LRRSHPEMMTWLVRLTVLVDSMF*MVSARL
Trigger: GAGTCGGGCAGACACCATGCAGAACATTGAGTCGAC...CAAGACTGTCAGCCTCACTAGCCATGTCATCATTTCTGGGTGGGAGCGTCGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294179.8
CDS-3UTR GCA 90 bp ATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTCTCCCAAGTACCCTGCACAGGCGGCATCATCTCCCTTTaGTGCCAACGCTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: ILSSSRETGPFSQVPCTGGIISL*CQRFLW
Trigger: CCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCC...GCCTGTGCAGGGTACTTGGGAGAAAGGCCCTGTTTCCCTGGAACTGCTAAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp AGCACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAATTGGTCCCTGGGGCTaGTTCCTCTCTTCACTCACA +
Preference number: 4 (lower is better)
Translates to: STFGRLSHQQPMSGVVQAIGPWG*FLSSLT
Trigger: TGTGAGTGAAGAGAGGAAGCAGCCCCAGGGACCAAT...TGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp GAAAACGAGCTGCAGCACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGGCAATGTCAGGGGTTGTaGAGGCAGCTGAAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: ENELQHIWQIESPAANVRQCQGL*RQLKGS
Trigger: TGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTG...CCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCTGCAGCTCGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
CDS-3UTR CCA 90 bp AGAGGATCCCTTGAGTCTAGGAGTTCAAGACTGCAAGTGAGCTATCATCACACCGCAGACAGAAACTCCTaGGTCCGATCCCGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RGSLESRSSRLQVSYHHTADRNS*VRSRQD
Trigger: GTCCTGCCGGGATCGGACCCAGGAGTTTCTGTCTGC...GGTGTGATGATAGCTCACTTGCAGTCTTGAACTCCTAGACTCAAGGGATCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486437.1
CDS-3UTR CCA 90 bp TCCCTGGGGCTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCGACAGCACGCAAAGCTaGCTTATTTGTCTGGATTCC +
Preference number: 4 (lower is better)
Translates to: SLGLLPLFTHRKVGKGIIDSTQS*LICLDS
Trigger: GGAATCCAGACAAATAAGCCAGCTTTGCGTGCTGTC...GATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAGCCCCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
CDS-3UTR CCA 90 bp GAGAAAACGAGCTGCAGCACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGCTGCAGCTGCTGGCTaGTCCGAGAGTCCATCATGT +
Preference number: 4 (lower is better)
Translates to: EKTSCSTFGRLSHQQPMSAAAAG*SESPSC
Trigger: ACATGATGGACTCTCGGACCAGCCAGCAGCTGCAGC...TGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCTGCAGCTCGTTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294179.8
ENST00000377897.8
CDS-3UTR CCA 90 bp AGGCTGGAGAGGGTTTATAAAAATCTCCTAGTGGAAACAACCTCCCCCACTGGCGCTGCAGCTGCTGGCTaGTCCGAGAGTCCATCATGT +
Preference number: 4 (lower is better)
Translates to: RLERVYKNLLVETTSPTGAAAAG*SESPSC
Trigger: ACATGATGGACTCTCGGACCAGCCAGCAGCTGCAGC...GCCAGTGGGGGAGGTTGTTTCCACTAGGAGATTTTTATAAACCCTCTCCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp ATTTTGACCATGAGCCACCGGTTGGAGGTGACAGACTGGAAGTACTTGAGGATCATGAGCTGCAGCTGCTaGCTGGTCCGAGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: ILTMSHRLEVTDWKYLRIMSCSC*LVRESI
Trigger: GATGGACTCTCGGACCAGCCAGCAGCTGCAGCTCAT...GATCCTCAAGTACTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGTCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp TCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCCACTCAATGTTCTGCATaGTGTCTGCCCGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: SLTGRWVRASSPFAANASTQCSA*CLPDSG
Trigger: TCCAGAGTCGGGCAGACACCATGCAGAACATTGAGT...GGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp TTGAGGATCTCTGAATGGGCGGCCTCAACGTCCAGCTGGGCTCCTAGCACGTTCCCAACTGCTGAAAGATaGAGCCCAACTCAACAATTG +
Preference number: 4 (lower is better)
Translates to: LRISEWAASTSSWAPSTFPTAER*SPTQQL
Trigger: CAATTGTTGAGTTGGGCTCCATCTTTCAGCAGTTGG...GAACGTGCTAGGAGCCCAGCTGGACGTTGAGGCCGCCCATTCAGAGATCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp TTTGCTGCCAACGCTTCCTTTGGGAGAGGCTGGAGAGGGTTTATAAAAATCTCCGCTCAGTGGCAGCACTaGCCACTTGCCTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: FAANASFGRGWRGFIKISAQWQH*PLAFPG
Trigger: TCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGC...GGAGATTTTTATAAACCCTCTCCAGCCTCTCCCAAAGGAAGCGTTGGCAGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGGGGATCAGGGGCAGTaGTCATTCTTAGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LSSLTGRWVRASSPFAANGDQGQ*SFLAVP
Trigger: TGGAACTGCTAAGAATGACCACTGCCCCTGATCCCC...GTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGGGAAAATTGGTCCCTaGGGCTGCTTCCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LSSLTGRWVRASSPFAANGKIGP*GCFLSS
Trigger: TGAAGAGAGGAAGCAGCCCCAGGGACCAATTTTCCC...GTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTCCAGAAATGATGACATaGCTAGTGAGGCTGACAGTC +
Preference number: 4 (lower is better)
Translates to: VGDQGQWSFLAVPGKQGLPEMMT*LVRLTV
Trigger: GACTGTCAGCCTCACTAGCCATGTCATCATTTCTGG...AAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294179.8
CDS-3UTR CCA 90 bp GCAGTCCCTGGGGACTTTAAGATGCCAATCCACGGGGAAGAGAAAGCTCCTCTGGAAAGCTCCTCTGTTTaGGGCGAGAGAGTGTATCTC +
Preference number: 4 (lower is better)
Translates to: AVPGDFKMPIHGEEKAPLESSSV*GERVYL
Trigger: GAGATACACTCTCTCGCCCCAAACAGAGGAGCTTTC...CAGAGGAGCTTTCTCTTCCCCGTGGATTGGCATCTTAAAGTCCCCAGGGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR TCA 90 bp CTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGCAGGACCTGTGTCTTTaGGAGACCCAGGTAGACACC +
Preference number: 4 (lower is better)
Translates to: LCSLPVTSQQSSNLEPCVQDLCL*ETQVDT
Trigger: GGTGTCTACCTGGGTCTCTCAAAGACACAGGTCCTG...CACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp CCTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTCAGGACCTGTGTCTTTaGGAGACCCAGGTAGACACC +
Preference number: 4 (lower is better)
Translates to: PLLPSSHFTAEFKSRTLCQDLCL*ETQVDT
Trigger: GGTGTCTACCTGGGTCTCTCAAAGACACAGGTCCTG...ACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp GTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTACGAAATCCTGGAGCTaGGCAATTTGTTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: VGDQGQWSFLAVPGKQGLTKSWS*AICLLR
Trigger: CCTCAACAAACAAATTGCTCAGCTCCAGGATTTCGT...AAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp CCCAGCTGGCCTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGATTCTCGTCGATCCTCTaGATGGTTTCCTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: PSWPLLPSSHFTAEFKSRFSSIL*MVSSCS
Trigger: GGAACAGGAGGAAACCATTCAGAGGATCGACGAGAA...TCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAGGCCAGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp GAAAACGAGCTGCAGCACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGGCAGACTGGAAGTACTTaGGGATCTCTGAATGGGCGG +
Preference number: 4 (lower is better)
Translates to: ENELQHIWQIESPAANVRQTGST*GSLNGR
Trigger: CCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTG...CCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCTGCAGCTCGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
CDS-3UTR TCA 90 bp TGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTCAGACTGGAAGTACTTaGGGATCTCTGAATGGGCGG +
Preference number: 4 (lower is better)
Translates to: CFLSSLTGRWVRASSPFAQTGST*GSLNGR
Trigger: CCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTG...AGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp GGGTGGATGGAAGCAGGTGAACTGGGTCCCATGGGTGGGCAGAATTCACTCTATAGTGTATCTCACCTCTaGATGGTTTCCTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GWMEAGELGPMGGQNSLYSVSHL*MVSSCS
Trigger: GGAACAGGAGGAAACCATTCAGAGGTGAGATACACT...ATAGAGTGAATTCTGCCCACCCATGGGACCCAGTTCACCTGCTTCCATCCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR GCA 90 bp CAGCACGCAAAGCTGGCTTATTTGTCTGGATTCCATTCTGGGCAACATAGTGAGGCTACTGCCAGCAGTTaGAGGGGACAGGACCTGTGT +
Preference number: 4 (lower is better)
Translates to: QHAKLAYLSGFHSGQHSEATASS*RGQDLC
Trigger: ACACAGGTCCTGTCCCCTGCAACTGCTGGCAGTAGC...CTCACTATGTTGCCCAGAATGGAATCCAGACAAATAAGCCAGCTTTGCGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486437.1
CDS-3UTR GCA 90 bp CAGCACGCAAAGCTGGCTTATTTGTCTGGATTCCATTCTGGGCAACATAGTGAGTGTCGCTGCTGCTACTaGCAGCAGTTGCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: QHAKLAYLSGFHSGQHSECRCCY*QQLQGT
Trigger: TGTCCCCTGCAACTGCTGGCAGTAGCAGCAGCGACA...CTCACTATGTTGCCCAGAATGGAATCCAGACAAATAAGCCAGCTTTGCGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486437.1
CDS-3UTR GCA 90 bp AGCACGCAAAGCTGGCTTATTTGTCTGGATTCCATTCTGGGCAACATAGTGAGAGGGCGATGTCGCTGCTaGTACTGCCAGCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: STQSWLICLDSILGNIVRGRCRC*YCQQLQ
Trigger: CTGCAACTGCTGGCAGTAGCAGCAGCGACATCGCCC...TCTCACTATGTTGCCCAGAATGGAATCCAGACAAATAAGCCAGCTTTGCGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486437.1
CDS-3UTR GCA 90 bp CACGCAAAGCTGGCTTATTTGTCTGGATTCCATTCTGGGCAACATAGTGAGACAGAGGGGCGATGTCGCTaGTGCTACTGCCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: HAKLAYLSGFHSGQHSETEGRCR*CYCQQL
Trigger: CAACTGCTGGCAGTAGCAGCAGCGACATCGCCCCTC...TGTCTCACTATGTTGCCCAGAATGGAATCCAGACAAATAAGCCAGCTTTGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486437.1
CDS-3UTR GCA 90 bp TTTATCATCAAAGAGGGACTTGCGCTTTGCCAAGATTGTCAGCTTCTCCAGCTTGTGTTGGAGTGGGTCTaGAGGTGCCGGCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: FIIKEGLALCQDCQLLQLVLEWV*RCRPLW
Trigger: CCAGAGTGGCCGGCACCTGCAGACCCACTCCAACAC...AAGCTGGAGAAGCTGACAATCTTGGCAAAGCGCAAGTCCCTCTTTGATGATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
CDS-3UTR GCA 90 bp TCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTGAAGCCAGTTTCGACTaGAAGGAGACCACAATGGTG +
Preference number: 4 (lower is better)
Translates to: SSLTGRWVRASSPFAANAEASFD*KETTMV
Trigger: CACCATTGTGGTCTCCTTGCAGTCGAAACTGGCTTC...AGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp AGCACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGAAGCCAGTTTCGACTaGAAGGAGACCACAATGGTG +
Preference number: 4 (lower is better)
Translates to: STFGRLSHQQPMSGVVQAEASFD*KETTMV
Trigger: CACCATTGTGGTCTCCTTGCAGTCGAAACTGGCTTC...TGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TGTTCTACTTGCCACTGTATCTCCCGCACCTGGAACAGTGCCTCACATGAACAGGTCGACTCAATGTTCTaGATGGTGTCTGCCCGACTC +
Preference number: 4 (lower is better)
Translates to: CSTCHCISRTWNSASHEQVDSMF*MVSARL
Trigger: GAGTCGGGCAGACACCATGCAGAACATTGAGTCGAC...CTGTTCATGTGAGGCACTGTTCCAGGTGCGGGAGATACAGTGGCAAGTAGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR GCA 90 bp CTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCCAAACCCCAACAGAGTaGCTCAGAGTAGAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: LLPLFTHRKVGKGIISLCQTPTE*LRVERV
Trigger: AACCCTCTCTACTCTGAGGCACTCTGTTGGGGTTTG...GCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp AGCACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCACAAACCCCAACAGAGTaGCTCAGAGTAGAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: STFGRLSHQQPMSGVVQAQTPTE*LRVERV
Trigger: AACCCTCTCTACTCTGAGGCACTCTGTTGGGGTTTG...TGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp GAGAAAACGAGCTGCAGCACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCATTCTCCCAAGTACCCTaGACAGGCTCAGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: EKTSCSTFGRLSHQQPMSFSQVP*TGSVAA
Trigger: TGCTGCCACTGAGCCTGTGCAGGGTACTTGGGAGAA...TGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCTGCAGCTCGTTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294179.8
ENST00000377897.8
CDS-3UTR GCA 90 bp CACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCCTTTGGTGGGAGAAAACGAGCTaGAGCACATTTGGCAGATTG +
Preference number: 4 (lower is better)
Translates to: HRKVGKGIISLCCQRFLWWEKTS*STFGRL
Trigger: CAATCTGCCAAATGTGCTGCAGCTCGTTTTCTCCCA...CCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294179.8
ENST00000377897.8
CDS-3UTR CCA 90 bp CAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTCTCCCAAGGACAGCACGCAAAGCTaGCTTATTTGTCTGGATTCC +
Preference number: 4 (lower is better)
Translates to: QGQWSFLAVPGKQGLSPKDSTQS*LICLDS
Trigger: GGAATCCAGACAAATAAGCCAGCTTTGCGTGCTGTC...CTTGGGAGAAAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
CDS-3UTR CCA 90 bp TTTGCTGCCAACGCTTCCTTTGGGAGAGGCTGGAGAGGGTTTATAAAAATCTCCACAATGGTGTTGGAGTaGGTCTGCAGGTGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: FAANASFGRGWRGFIKISTMVLE*VCRCRP
Trigger: TGGCCGGCACCTGCAGACCCACTCCAACACCATTGT...GGAGATTTTTATAAACCCTCTCCAGCCTCTCCCAAAGGAAGCGTTGGCAGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp AGGCTGGAGAGGGTTTATAAAAATCTCCTAGTGGAAACAACCTCCCCCACTGGCAGACCACAATGGTGTTaGAGTGGGTCTGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: RLERVYKNLLVETTSPTGRPQWC*SGSAGA
Trigger: GGCACCTGCAGACCCACTCCAACACCATTGTGGTCT...GCCAGTGGGGGAGGTTGTTTCCACTAGGAGATTTTTATAAACCCTCTCCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CTGGAGAGGGTTTATAAAAATCTCCTAGTGGAAACAACCTCCCCCACTGGCCCCGCAAGGAGACCACAATaGTGTTGGAGTGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LERVYKNLLVETTSPTGPARRPQ*CWSGSA
Trigger: TGCAGACCCACTCCAACACCATTGTGGTCTCCTTGC...GGGGCCAGTGGGGGAGGTTGTTTCCACTAGGAGATTTTTATAAACCCTCTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACAGTCCATCATGTCGATaGCGACATCCTTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: LSSLTGRWVRASSPFAANSPSCR*RHPWRH
Trigger: ATGCCTCCAAGGATGTCGCCATCGACATGATGGACT...GTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTCTCCCAAGTAAGTCCATCATGTCGATaGCGACATCCTTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: GAVVILSSSRETGPFSQVSPSCR*RHPWRH
Trigger: ATGCCTCCAAGGATGTCGCCATCGACATGATGGACT...TACTTGGGAGAAAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp AAGATGCCAATCCACGGGGAAGAGAAAGCTCCTCTGTTTGGGGCGAGAGAGTGTACTCAATGTTCTGCATaGTGTCTGCCCGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: KMPIHGEEKAPLFGARECTQCSA*CLPDSG
Trigger: TCCAGAGTCGGGCAGACACCATGCAGAACATTGAGT...ACACTCTCTCGCCCCAAACAGAGGAGCTTTCTCTTCCCCGTGGATTGGCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CCA 90 bp GTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTCCAACTGCTGAAAGATaGAGCCCAACTCAACAATTG +
Preference number: 4 (lower is better)
Translates to: VGDQGQWSFLAVPGKQGLPTAER*SPTQQL
Trigger: CAATTGTTGAGTTGGGCTCCATCTTTCAGCAGTTGG...AAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CTTTATCATCAAAGAGGGACTTGCGCTTTGCCAAGATTGTCAGCTTCTCCAGCTGCTCAGTGGCAGCACTaGCCACTTGCCTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LYHQRGTCALPRLSASPAAQWQH*PLAFPG
Trigger: TCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGC...AGCTGGAGAAGCTGACAATCTTGGCAAAGCGCAAGTCCCTCTTTGATGATAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
CDS-3UTR CCA 90 bp CATAGAAGCCAGTTTCGACTGCAAGGAGACCACAATGGTGTTGGAGTGGGTCTGGGGGATCAGGGGCAGTaGTCATTCTTAGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: HRSQFRLQGDHNGVGVGLGDQGQ*SFLAVP
Trigger: TGGAACTGCTAAGAATGACCACTGCCCCTGATCCCC...CAGACCCACTCCAACACCATTGTGGTCTCCTTGCAGTCGAAACTGGCTTCTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492066.5
CDS-3UTR TCA 90 bp TTCACTGCGTTGTCGGACAGCACGCAAAGCTGGCTTATTTGTCTGGATTCCATTCAGGACCTGTGTCTTTaGGAGACCCAGGTAGACACC +
Preference number: 4 (lower is better)
Translates to: FTALSDSTQSWLICLDSIQDLCL*ETQVDT
Trigger: GGTGTCTACCTGGGTCTCTCAAAGACACAGGTCCTG...AATGGAATCCAGACAAATAAGCCAGCTTTGCGTGCTGTCCGACAACGCAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486437.1
CDS-3UTR TCA 90 bp GCAGTCCCTGGGGACTTTAAGATGCCAATCCACGGGGAAGAGAAAGCTCCTCTGACGAAATCCTGGAGCTaGGCAATTTGTTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: AVPGDFKMPIHGEEKAPLTKSWS*AICLLR
Trigger: CCTCAACAAACAAATTGCTCAGCTCCAGGATTTCGT...CAGAGGAGCTTTCTCTTCCCCGTGGATTGGCATCTTAAAGTCCCCAGGGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR TCA 90 bp GTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTTCATAGGCCTGAGAATCCTGCTCGTCAATaGGCTGCAGCTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VTSQQSSNLEPCVFHRPENPARQ*AAAAGW
Trigger: CCAGCCAGCAGCTGCAGCTCATTGACGAGCAGGATT...CTCAGGCCTATGAAACACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp TGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTATGTGTGCCAACTGCTaGAAGATGGAGCCCAACTCA +
Preference number: 4 (lower is better)
Translates to: CFLSSLTGRWVRASSPFAMCANC*KMEPNS
Trigger: TGAGTTGGGCTCCATCTTTCAGCAGTTGGCACACAT...AGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp TGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCACATTTGGCAGATTaGGTCACCAGCAGCCAATGT +
Preference number: 4 (lower is better)
Translates to: CFLSSLTGRWVRASSPFAAHLAD*VTSSQC
Trigger: ACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGC...AGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp CACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCAACAAAAGGACACTCTaGATGGTTTCCTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: HIWQIESPAANVRGCAGSNKRTL*MVSSCS
Trigger: GGAACAGGAGGAAACCATTCAGAGTGTCCTTTTGTT...GCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377897.8
CDS-3UTR GCA 90 bp GTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTTCATAGGCCTGAGTGTCGCTGCTGCTACTaGCAGCAGTTGCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: VTSQQSSNLEPCVFHRPECRCCY*QQLQGT
Trigger: TGTCCCCTGCAACTGCTGGCAGTAGCAGCAGCGACA...CTCAGGCCTATGAAACACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCCATCAAAGAGGGACTTaGGCTTTGCCAAGATTGTCA +
Preference number: 4 (lower is better)
Translates to: LFTHRKVGKGIISLCCQRHQRGT*ALPRLS
Trigger: TGACAATCTTGGCAAAGCGCAAGTCCCTCTTTGATG...GCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp AATAAAAACTTGTTGGGTGGATGGAAGCAGGTGAACTGGGTCCCATGGGTGGGCGAAGCCAGTTTCGACTaGAAGGAGACCACAATGGTG +
Preference number: 4 (lower is better)
Translates to: NKNLLGGWKQVNWVPWVGEASFD*KETTMV
Trigger: CACCATTGTGGTCTCCTTGCAGTCGAAACTGGCTTC...GCCCACCCATGGGACCCAGTTCACCTGCTTCCATCCACCCAACAAGTTTTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR GCA 90 bp GCAGAATTCACTCTATCTTCCAAAAGGCATCAAGCAGTCCCTGGGGACTTTAAGTCAATGAGCTGCAGCTaGTGGCTGGTCCGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: AEFTLSSKRHQAVPGDFKSMSCS*WLVRES
Trigger: GGACTCTCGGACCAGCCAGCAGCTGCAGCTCATTGA...CTTAAAGTCCCCAGGGACTGCTTGATGCCTTTTGGAAGATAGAGTGAATTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR GCA 90 bp TCCCTGGGGCTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTTCCTTAACCATGTGTaGCAACTGCTGAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: SLGLLPLFTHRKVGKGIIFLNHV*QLLKDG
Trigger: TCCATCTTTCAGCAGTTGGCACACATGGTTAAGGAA...GATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAGCCCCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTCTCCCAAGTACCCTGCAATCATCTCCCTTTGCTaGCAACGCTTCCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: WSFLAVPGKQGLSPKYPAIISLC*QRFLWE
Trigger: CTCCCAAAGGAAGCGTTGGCAGCAAAGGGAGATGAT...TGCAGGGTACTTGGGAGAAAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp AGGCTGGAGAGGGTTTATAAAAATCTCCTAGTGGAAACAACCTCCCCCACTGGCGGCATCATCTCCCTTTaGTGCCAACGCTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: RLERVYKNLLVETTSPTGGIISL*CQRFLW
Trigger: CCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCC...GCCAGTGGGGGAGGTTGTTTCCACTAGGAGATTTTTATAAACCCTCTCCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CCTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTATTGGTCCCTGGGGCTaGTTCCTCTCTTCACTCACA +
Preference number: 4 (lower is better)
Translates to: PLLPSSHFTAEFKSRTLCIGPWG*FLSSLT
Trigger: TGTGAGTGAAGAGAGGAAGCAGCCCCAGGGACCAAT...ACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TTTGCTGCCAACGCTTCCTTTGGGAGAGGCTGGAGAGGGTTTATAAAAATCTCCCAATGTCAGGGGTTGTaGAGGCAGCTGAAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: FAANASFGRGWRGFIKISQCQGL*RQLKGS
Trigger: TGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTG...GGAGATTTTTATAAACCCTCTCCAGCCTCTCCCAAAGGAAGCGTTGGCAGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GCGTTGTCGGACAGCACGCAAAGCTGGCTTATTTGTCTGGATTCCATTCTGGGCGACAGCACGCAAAGCTaGCTTATTTGTCTGGATTCC +
Preference number: 4 (lower is better)
Translates to: ALSDSTQSWLICLDSILGDSTQS*LICLDS
Trigger: GGAATCCAGACAAATAAGCCAGCTTTGCGTGCTGTC...GCCCAGAATGGAATCCAGACAAATAAGCCAGCTTTGCGTGCTGTCCGACAACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486437.1
CDS-3UTR CCA 90 bp CTGTTCCTTAACCATGTGTGCCAACTGCTGAAAGATGGAGCCCAACTCAACAATACATCCTTGGAGGCATaGGACTCTGCCCCCAGAACC +
Preference number: 4 (lower is better)
Translates to: LFLNHVCQLLKDGAQLNNTSLEA*DSAPRT
Trigger: GGTTCTGGGGGCAGAGTCCCATGCCTCCAAGGATGT...ATTGTTGAGTTGGGCTCCATCTTTCAGCAGTTGGCACACATGGTTAAGGAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCCCAACTGCTGAAAGATaGAGCCCAACTCAACAATTG +
Preference number: 4 (lower is better)
Translates to: HIWQIESPAANVRGCAGSPTAER*SPTQQL
Trigger: CAATTGTTGAGTTGGGCTCCATCTTTCAGCAGTTGG...GCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CCTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGGGGATCAGGGGCAGTaGTCATTCTTAGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: PLLPSSHFTAEFKSRTLCGDQGQ*SFLAVP
Trigger: TGGAACTGCTAAGAATGACCACTGCCCCTGATCCCC...ACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GCAGAATTCACTCTATCTTCCAAAAGGCATCAAGCAGTCCCTGGGGACTTTAAGTGGAAGCAGGTGAACTaGGTCCCATGGGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: AEFTLSSKRHQAVPGDFKWKQVN*VPWVGR
Trigger: TCTGCCCACCCATGGGACCCAGTTCACCTGCTTCCA...CTTAAAGTCCCCAGGGACTGCTTGATGCCTTTTGGAAGATAGAGTGAATTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431400.2
3UTR CAA 72 bp AATTGGGAGAAAACGAGCTGCAGCACATTTGGCAGATaGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: NWEKTSCSTFGR*SHQQPMSGVVQ
Trigger: CTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCTGCAGCTCGTTTTCTCCCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294179.8
ENST00000377897.8
3UTR CAA 72 bp GTGCCAACTGCTGAAAGATGGAGCCCAACTCAACAATaGTCGACTCAATGTTCTGCATGGTGTCTGCCCGAC +
Preference number: 4 (lower is better)
Translates to: VPTAERWSPTQQ*STQCSAWCLPD
Trigger: GTCGGGCAGACACCATGCAGAACATTGAGTCGACAATTGTTGAGTTGGGCTCCATCTTTCAGCAGTTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp TTGGAGGTGACAGACTGGAAGTACTTGAGGATCTCTGAATGGGCGGCCTCAACGACGAAATCCTGGAGCTaGGCAATTTGTTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LEVTDWKYLRISEWAASTTKSWS*AICLLR
Trigger: CCTCAACAAACAAATTGCTCAGCTCCAGGATTTCGT...CGTTGAGGCCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp TTTATCATCAAAGAGGGACTTGCGCTTTGCCAAGATTGTCAGCTTCTCCAGCTTAATCCTGCTCGTCAATaGGCTGCAGCTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: FIIKEGLALCQDCQLLQLNPARQ*AAAAGW
Trigger: CCAGCCAGCAGCTGCAGCTCATTGACGAGCAGGATT...AAGCTGGAGAAGCTGACAATCTTGGCAAAGCGCAAGTCCCTCTTTGATGATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
CDS-3UTR TCA 90 bp GTGGGCAGAATTCACTCTATCTTCCAAAAGGCATCAAGCAGTCCCTGGGGACTTATGTGTGCCAACTGCTaGAAGATGGAGCCCAACTCA +
Preference number: 4 (lower is better)
Translates to: VGRIHSIFQKASSSPWGLMCANC*KMEPNS
Trigger: TGAGTTGGGCTCCATCTTTCAGCAGTTGGCACACAT...AAGTCCCCAGGGACTGCTTGATGCCTTTTGGAAGATAGAGTGAATTCTGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR TCA 90 bp AGGCTGGAGAGGGTTTATAAAAATCTCCTAGTGGAAACAACCTCCCCCACTGGCTTCTCGTCGATCCTCTaGATGGTTTCCTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RLERVYKNLLVETTSPTGFSSIL*MVSSCS
Trigger: GGAACAGGAGGAAACCATTCAGAGGATCGACGAGAA...GCCAGTGGGGGAGGTTGTTTCCACTAGGAGATTTTTATAAACCCTCTCCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CACGCAAAGCTGGCTTATTTGTCTGGATTCCATTCTGGGCAACATAGTGAGACAGGGTCTGCAGCGACTTaGAGGCAGACAGAAACTCCT +
Preference number: 4 (lower is better)
Translates to: HAKLAYLSGFHSGQHSETGSAAT*RQTETP
Trigger: AGGAGTTTCTGTCTGCCTGCAAGTCGCTGCAGACCC...TGTCTCACTATGTTGCCCAGAATGGAATCCAGACAAATAAGCCAGCTTTGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486437.1
CDS-3UTR GCA 90 bp GGATGGAAGCAGGTGAACTGGGTCCCATGGGTGGGCAGAATTCACTCTATCTTCCATCAAAGAGGGACTTaGGCTTTGCCAAGATTGTCA +
Preference number: 4 (lower is better)
Translates to: GWKQVNWVPWVGRIHSIFHQRGT*ALPRLS
Trigger: TGACAATCTTGGCAAAGCGCAAGTCCCTCTTTGATG...GAAGATAGAGTGAATTCTGCCCACCCATGGGACCCAGTTCACCTGCTTCCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR GCA 90 bp TCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCCTTCCTTAACCATGTGTaGCAACTGCTGAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: SLTGRWVRASSPFAANASFLNHV*QLLKDG
Trigger: TCCATCTTTCAGCAGTTGGCACACATGGTTAAGGAA...GGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp AGGAAGATTTTGACCATGAGCCACCGGTTGGAGGTGACAGACTGGAAGTACTTGCAAACCCCAACAGAGTaGCTCAGAGTAGAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: RKILTMSHRLEVTDWKYLQTPTE*LRVERV
Trigger: AACCCTCTCTACTCTGAGGCACTCTGTTGGGGTTTG...CAAGTACTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGTCAAAATCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CCTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTATCATCTCCCTTTGCTaGCAACGCTTCCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: PLLPSSHFTAEFKSRTLCIISLC*QRFLWE
Trigger: CTCCCAAAGGAAGCGTTGGCAGCAAAGGGAGATGAT...ACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTTCACAATGTCAGGGGTTGTaGAGGCAGCTGAAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LPSSHFTAEFKSRTLCVSQCQGL*RQLKGS
Trigger: TGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTG...TGAAACACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp TGGATGGAAGCAGGTGAACTGGGTCCCATGGGTGGGCAGAATTCACTCTATCTTGACAGCACGCAAAGCTaGCTTATTTGTCTGGATTCC +
Preference number: 4 (lower is better)
Translates to: WMEAGELGPMGGQNSLYLDSTQS*LICLDS
Trigger: GGAATCCAGACAAATAAGCCAGCTTTGCGTGCTGTC...AAGATAGAGTGAATTCTGCCCACCCATGGGACCCAGTTCACCTGCTTCCATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CCA 90 bp GCAGAATTCACTCTATCTTCCAAAAGGCATCAAGCAGTCCCTGGGGACTTTAAGAGACCACAATGGTGTTaGAGTGGGTCTGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: AEFTLSSKRHQAVPGDFKRPQWC*SGSAGA
Trigger: GGCACCTGCAGACCCACTCCAACACCATTGTGGTCT...CTTAAAGTCCCCAGGGACTGCTTGATGCCTTTTGGAAGATAGAGTGAATTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CCA 90 bp CAAAGCAGCTCCAGACAGACTTTACTGTTCTACTTGCCACTGTATCTCCCGCACAGTCCATCATGTCGATaGCGACATCCTTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: QSSSRQTLLFYLPLYLPHSPSCR*RHPWRH
Trigger: ATGCCTCCAAGGATGTCGCCATCGACATGATGGACT...GTGCGGGAGATACAGTGGCAAGTAGAACAGTAAAGTCTGTCTGGAGCTGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CCA 90 bp CTTCGACGCTCCCACCCAGAAATGATGACATGGCTAGTGAGGCTGACAGTCTTGTTGGAGGTGACAGACTaGAAGTACTTGAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LRRSHPEMMTWLVRLTVLLEVTD*KYLRIS
Trigger: AGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAA...CAAGACTGTCAGCCTCACTAGCCATGTCATCATTTCTGGGTGGGAGCGTCGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294179.8
CDS-3UTR CCA 90 bp GGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTCTCCCAAGTATTGGAGGTGACAGACTaGAAGTACTTGAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: GAVVILSSSRETGPFSQVLEVTD*KYLRIS
Trigger: AGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAA...TACTTGGGAGAAAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CCCAGCTGGCCTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAAAGAAAGAGGTCAATTaGGAAAATTGGTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PSWPLLPSSHFTAEFKSRKKEVN*ENWSLG
Trigger: CCCCAGGGACCAATTTTCCCAATTGACCTCTTTCTT...TCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAGGCCAGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp ACAATGAGGATGAGGAAGATTTTGACCATGAGCCACCGGTTGGAGGTGACAGACGAGCTGCAGCACATTTaGCAGATTGAGTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: TMRMRKILTMSHRLEVTDELQHI*QIESPA
Trigger: TGCTGGTGACTCAATCTGCCAAATGTGCTGCAGCTC...GTCTGTCACCTCCAACCGGTGGCTCATGGTCAAAATCTTCCTCATCCTCATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377897.8
CDS-3UTR CCA 90 bp AAGCAGCTCCAGACAGACTTTACTGTTCTACTTGCCACTGTATCTCCCGCACCTACTGGGTCCCATGGGTaGGCAGAATTCACTCTATCT +
Preference number: 4 (lower is better)
Translates to: KQLQTDFTVLLATVSPAPTGSHG*AEFTLS
Trigger: AGATAGAGTGAATTCTGCCCACCCATGGGACCCAGT...AGGTGCGGGAGATACAGTGGCAAGTAGAACAGTAAAGTCTGTCTGGAGCTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CCA 90 bp TACTGTTCTACTTGCCACTGTATCTCCCGCACCTGGAACAGTGCCTCACATGAATGTATCTCCCGCACCTaGAACAGTGCCTCACATGAA +
Preference number: 4 (lower is better)
Translates to: YCSTCHCISRTWNSASHECISRT*NSASHE
Trigger: TTCATGTGAGGCACTGTTCCAGGTGCGGGAGATACA...TTCATGTGAGGCACTGTTCCAGGTGCGGGAGATACAGTGGCAAGTAGAACAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
3UTR CAA 72 bp CACTGCGTTGTCGGACAGCACGCAAAGCTGGCTTATTaGTCTGGATTCCATTCTGGGCAACATAGTGAGACA +
Preference number: 4 (lower is better)
Translates to: HCVVGQHAKLAY*SGFHSGQHSET
Trigger: TGTCTCACTATGTTGCCCAGAATGGAATCCAGACAAATAAGCCAGCTTTGCGTGCTGTCCGACAACGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486437.1
CDS-3UTR TCA 90 bp CTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTTCACAGACTGGAAGTACTTaGGGATCTCTGAATGGGCGG +
Preference number: 4 (lower is better)
Translates to: LPSSHFTAEFKSRTLCVSQTGST*GSLNGR
Trigger: CCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTG...TGAAACACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp GGAGAAAACGAGCTGCAGCACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCCATCAAAGAGGGACTTaGGCTTTGCCAAGATTGTCA +
Preference number: 4 (lower is better)
Translates to: GENELQHIWQIESPAANVHQRGT*ALPRLS
Trigger: TGACAATCTTGGCAAAGCGCAAGTCCCTCTTTGATG...GACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCTGCAGCTCGTTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294179.8
ENST00000377897.8
CDS-3UTR GCA 90 bp TTTGCTGCCAACGCTTCCTTTGGGAGAGGCTGGAGAGGGTTTATAAAAATCTCCGAAGCCAGTTTCGACTaGAAGGAGACCACAATGGTG +
Preference number: 4 (lower is better)
Translates to: FAANASFGRGWRGFIKISEASFD*KETTMV
Trigger: CACCATTGTGGTCTCCTTGCAGTCGAAACTGGCTTC...GGAGATTTTTATAAACCCTCTCCAGCCTCTCCCAAAGGAAGCGTTGGCAGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTTCCTTAACCATGTGTaGCAACTGCTGAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: SSLTGRWVRASSPFAANAFLNHV*QLLKDG
Trigger: TCCATCTTTCAGCAGTTGGCACACATGGTTAAGGAA...AGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp AAAAACTTGTTGGGTGGATGGAAGCAGGTGAACTGGGTCCCATGGGTGGGCAGATTCCTTAACCATGTGTaGCAACTGCTGAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: KNLLGGWKQVNWVPWVGRFLNHV*QLLKDG
Trigger: TCCATCTTTCAGCAGTTGGCACACATGGTTAAGGAA...TCTGCCCACCCATGGGACCCAGTTCACCTGCTTCCATCCACCCAACAAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR GCA 90 bp TCCACTGCTTTATCATCAAAGAGGGACTTGCGCTTTGCCAAGATTGTCAGCTTCATTGGTCCCTGGGGCTaGTTCCTCTCTTCACTCACA +
Preference number: 4 (lower is better)
Translates to: STALSSKRDLRFAKIVSFIGPWG*FLSSLT
Trigger: TGTGAGTGAAGAGAGGAAGCAGCCCCAGGGACCAAT...GAAGCTGACAATCTTGGCAAAGCGCAAGTCCCTCTTTGATGATAAAGCAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492066.5
CDS-3UTR CCA 90 bp TGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTCTCCCAAGTACCCTGCACCAACTGCTGAAAGATaGAGCCCAACTCAACAATTG +
Preference number: 4 (lower is better)
Translates to: WSFLAVPGKQGLSPKYPAPTAER*SPTQQL
Trigger: CAATTGTTGAGTTGGGCTCCATCTTTCAGCAGTTGG...TGCAGGGTACTTGGGAGAAAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CGATTTGAAGTCATTGGACATAGAAGCCAGTTTCGACTGCAAGGAGACCACAATTTGAGGATCTCTGAATaGGCGGCCTCAACGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RFEVIGHRSQFRLQGDHNLRISE*AASTSS
Trigger: GCTGGACGTTGAGGCCGCCCATTCAGAGATCCTCAA...ATTGTGGTCTCCTTGCAGTCGAAACTGGCTTCTATGTCCAATGACTTCAAATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
CDS-3UTR CCA 90 bp GAAAACGAGCTGCAGCACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGGTTGGAGGTGACAGACTaGAAGTACTTGAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: ENELQHIWQIESPAANVRLEVTD*KYLRIS
Trigger: AGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAA...CCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCTGCAGCTCGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
CDS-3UTR CCA 90 bp TGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTTGGGAAAATTGGTCCCTaGGGCTGCTTCCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: CSLPVTSQQSSNLEPCVFGKIGP*GCFLSS
Trigger: TGAAGAGAGGAAGCAGCCCCAGGGACCAATTTTCCC...AAACACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CTGTTCCTTAACCATGTGTGCCAACTGCTGAAAGATGGAGCCCAACTCAACAATGGGAAAATTGGTCCCTaGGGCTGCTTCCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LFLNHVCQLLKDGAQLNNGKIGP*GCFLSS
Trigger: TGAAGAGAGGAAGCAGCCCCAGGGACCAATTTTCCC...ATTGTTGAGTTGGGCTCCATCTTTCAGCAGTTGGCACACATGGTTAAGGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp CATGTGTGCCAACTGCTGAAAGATGGAGCCCAACTCAACAATTGTCGACTCAATTTCTCGTCGATCCTCTaGATGGTTTCCTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: HVCQLLKDGAQLNNCRLNFSSIL*MVSSCS
Trigger: GGAACAGGAGGAAACCATTCAGAGGATCGACGAGAA...ATTGAGTCGACAATTGTTGAGTTGGGCTCCATCTTTCAGCAGTTGGCACACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
CDS-3UTR TCA 90 bp CATGTGTGCCAACTGCTGAAAGATGGAGCCCAACTCAACAATTGTCGACTCAATGCACATTTGGCAGATTaGGTCACCAGCAGCCAATGT +
Preference number: 4 (lower is better)
Translates to: HVCQLLKDGAQLNNCRLNAHLAD*VTSSQC
Trigger: ACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGC...ATTGAGTCGACAATTGTTGAGTTGGGCTCCATCTTTCAGCAGTTGGCACACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CAGAATTCACTCTATCTTCCAAAAGGCATCAAGCAGTCCCTGGGGACTTTAAGAGTTCTGCATGGTGTCTaGCCGACTCTGGATGTAGGA +
Preference number: 4 (lower is better)
Translates to: QNSLYLPKGIKQSLGTLRVLHGV*PTLDVG
Trigger: TCCTACATCCAGAGTCGGGCAGACACCATGCAGAAC...TCTTAAAGTCCCCAGGGACTGCTTGATGCCTTTTGGAAGATAGAGTGAATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR GCA 90 bp TGTCGACTCAATGTTCTGCATGGTGTCTGCCCGACTCTGGATGTAGGAATCCTGTTCCTTAACCATGTGTaGCAACTGCTGAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: CRLNVLHGVCPTLDVGILFLNHV*QLLKDG
Trigger: TCCATCTTTCAGCAGTTGGCACACATGGTTAAGGAA...CAGGATTCCTACATCCAGAGTCGGGCAGACACCATGCAGAACATTGAGTCGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp CTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTTCAATCATCTCCCTTTGCTaGCAACGCTTCCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LPSSHFTAEFKSRTLCVSIISLC*QRFLWE
Trigger: CTCCCAAAGGAAGCGTTGGCAGCAAAGGGAGATGAT...TGAAACACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TTCACTCTATCTTCCAAAAGGCATCAAGCAGTCCCTGGGGACTTTAAGATGCCACTGGGGACTTTAAGATaGCAATCCACGGGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: FTLSSKRHQAVPGDFKMPLGTLR*QSTGKR
Trigger: TCTCTTCCCCGTGGATTGGCATCTTAAAGTCCCCAG...TGGCATCTTAAAGTCCCCAGGGACTGCTTGATGCCTTTTGGAAGATAGAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CCA 90 bp AATTCACTCTATCTTCCAAAAGGCATCAAGCAGTCCCTGGGGACTTTAAGATGCGCAAGGAGACCACAATaGTGTTGGAGTGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: NSLYLPKGIKQSLGTLRCARRPQ*CWSGSA
Trigger: TGCAGACCCACTCCAACACCATTGTGGTCTCCTTGC...GCATCTTAAAGTCCCCAGGGACTGCTTGATGCCTTTTGGAAGATAGAGTGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CCA 90 bp TGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTTAGTCCATCATGTCGATaGCGACATCCTTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: CSLPVTSQQSSNLEPCVFSPSCR*RHPWRH
Trigger: ATGCCTCCAAGGATGTCGCCATCGACATGATGGACT...AAACACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GAAGCAGGTGAACTGGGTCCCATGGGTGGGCAGAATTCACTCTATCTTCCAAAACCAACTGCTGAAAGATaGAGCCCAACTCAACAATTG +
Preference number: 4 (lower is better)
Translates to: EAGELGPMGGQNSLYLPKPTAER*SPTQQL
Trigger: CAATTGTTGAGTTGGGCTCCATCTTTCAGCAGTTGG...TTTTGGAAGATAGAGTGAATTCTGCCCACCCATGGGACCCAGTTCACCTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CCA 90 bp CTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTGGAGGTGACAGACTaGAAGTACTTGAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LCSLPVTSQQSSNLEPCVLEVTD*KYLRIS
Trigger: AGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAA...CACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp CTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTTCAGAGCTGCAGCACATTTaGCAGATTGAGTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LPSSHFTAEFKSRTLCVSELQHI*QIESPA
Trigger: TGCTGGTGACTCAATCTGCCAAATGTGCTGCAGCTC...TGAAACACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
CDS-3UTR GCA 90 bp ACTTCTAAAACCGATTTGAAGTCATTGGACATAGAAGCCAGTTTCGACTGCAAGTCTCTCCGGCTCCTCTaGTGCTTCAGGTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: TSKTDLKSLDIEASFDCKSLRLL*CFRFSV
Trigger: GACAGAGAACCTGAAGCAGCAGAGGAGCCGGAGAGA...CTTGCAGTCGAAACTGGCTTCTATGTCCAATGACTTCAAATCGGTTTTAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492066.5
CDS-3UTR GCA 90 bp GTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTTCATAGGCCTGAGTGGGAGAAAACGAGCTaGAGCACATTTGGCAGATTG +
Preference number: 4 (lower is better)
Translates to: VTSQQSSNLEPCVFHRPEWEKTS*STFGRL
Trigger: CAATCTGCCAAATGTGCTGCAGCTCGTTTTCTCCCA...CTCAGGCCTATGAAACACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294179.8
ENST00000377897.8
CDS-3UTR GCA 90 bp AGAGGATCCCTTGAGTCTAGGAGTTCAAGACTGCAAGTGAGCTATCATCACACCAAATTAGCTGAGTGGTaGATCCATGTAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RGSLESRSSRLQVSYHHTKLAEW*IHVVPA
Trigger: AGCTGGGACTACATGGATGCACCACTCAGCTAATTT...GGTGTGATGATAGCTCACTTGCAGTCTTGAACTCCTAGACTCAAGGGATCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486437.1
CDS-3UTR CCA 90 bp TTTGCTGCCAACGCTTCCTTTGGGAGAGGCTGGAGAGGGTTTATAAAAATCTCCTTGGAGGTGACAGACTaGAAGTACTTGAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: FAANASFGRGWRGFIKISLEVTD*KYLRIS
Trigger: AGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAA...GGAGATTTTTATAAACCCTCTCCAGCCTCTCCCAAAGGAAGCGTTGGCAGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CCA 90 bp GTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTTCATAGGCCTGAGCAGTCTTGCTGTAATTaGGAGAAAACGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VTSQQSSNLEPCVFHRPEQSCCN*EKTSCS
Trigger: GCTGCAGCTCGTTTTCTCCCAATTACAGCAAGACTG...CTCAGGCCTATGAAACACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294179.8
ENST00000377897.8
CDS-3UTR CCA 90 bp TCTTGCTGTAATTGGGAGAAAACGAGCTGCAGCACATTTGGCAGATTGAGTCACCAGTCTTGCTGTAATTaGGAGAAAACGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SCCNWEKTSCSTFGRLSHQSCCN*EKTSCS
Trigger: GCTGCAGCTCGTTTTCTCCCAATTACAGCAAGACTG...GTGACTCAATCTGCCAAATGTGCTGCAGCTCGTTTTCTCCCAATTACAGCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294179.8
ENST00000377897.8
CDS-3UTR TCA 90 bp TCTTGCTGTAATTGGGAGAAAACGAGCTGCAGCACATTTGGCAGATTGAGTCACACGAAATCCTGGAGCTaGGCAATTTGTTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SCCNWEKTSCSTFGRLSHTKSWS*AICLLR
Trigger: CCTCAACAAACAAATTGCTCAGCTCCAGGATTTCGT...GTGACTCAATCTGCCAAATGTGCTGCAGCTCGTTTTCTCCCAATTACAGCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294179.8
ENST00000377897.8
CDS-3UTR TCA 90 bp GTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTTCATAGGCCTGAGACGAAATCCTGGAGCTaGGCAATTTGTTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: VTSQQSSNLEPCVFHRPETKSWS*AICLLR
Trigger: CCTCAACAAACAAATTGCTCAGCTCCAGGATTTCGT...CTCAGGCCTATGAAACACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp TGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTTCATCAAAGAGGGACTTaGGCTTTGCCAAGATTGTCA +
Preference number: 4 (lower is better)
Translates to: CSLPVTSQQSSNLEPCVFHQRGT*ALPRLS
Trigger: TGACAATCTTGGCAAAGCGCAAGTCCCTCTTTGATG...AAACACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR GCA 90 bp ACTTCTAAAACCGATTTGAAGTCATTGGACATAGAAGCCAGTTTCGACTGCAAGGTTCTGCATGGTGTCTaGCCGACTCTGGATGTAGGA +
Preference number: 4 (lower is better)
Translates to: TSKTDLKSLDIEASFDCKVLHGV*PTLDVG
Trigger: TCCTACATCCAGAGTCGGGCAGACACCATGCAGAAC...CTTGCAGTCGAAACTGGCTTCTATGTCCAATGACTTCAAATCGGTTTTAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492066.5
CDS-3UTR CCA 90 bp CTGTTCCTTAACCATGTGTGCCAACTGCTGAAAGATGGAGCCCAACTCAACAATAAGAAAGAGGTCAATTaGGAAAATTGGTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LFLNHVCQLLKDGAQLNNKKEVN*ENWSLG
Trigger: CCCCAGGGACCAATTTTCCCAATTGACCTCTTTCTT...ATTGTTGAGTTGGGCTCCATCTTTCAGCAGTTGGCACACATGGTTAAGGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
3UTR CAA 72 bp TTCTCTGTCCTCACTTCTAAAACCGATTTGAAGTCATaGGACATAGAAGCCAGTTTCGACTGCAAGGAGACC +
Preference number: 4 (lower is better)
Translates to: FSVLTSKTDLKS*DIEASFDCKET
Trigger: GGTCTCCTTGCAGTCGAAACTGGCTTCTATGTCCAATGACTTCAAATCGGTTTTAGAAGTGAGGACAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492066.5
3UTR CAA 72 bp TGCTTCAGGTTCTCTGTCCTCACTTCTAAAACCGATTaGAAGTCATTGGACATAGAAGCCAGTTTCGACTGC +
Preference number: 4 (lower is better)
Translates to: CFRFSVLTSKTD*KSLDIEASFDC
Trigger: GCAGTCGAAACTGGCTTCTATGTCCAATGACTTCAAATCGGTTTTAGAAGTGAGGACAGAGAACCTGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492066.5
CDS CCA 90 bp ACTTGCAGGCAGACAGAAACTCCTGGGTCCGATCCCGGCAGGACATaGTGTCGGGAGGGGGAGGGACGAGGGTCACTCCCCTCTGCCGCC +
Preference number: 5 (lower is better)
Translates to: TCRQTETPGSDPGRT*CREGEGRGSLPSAA
Trigger: GGCGGCAGAGGGGAGTGACCCTCGTCCCTCCCCCTCCCGACACCATGTCCTGCCGGGATCGGACCCAGGAGTTTCTGTCTGCCTGCAAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394690.5
ENST00000488303.5
CDS-3UTR CAA 90 bp GGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACGGCAGCACTGGCCACTaGCCTTCCCAGGAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: GSVAALATCLPRRVPNPNGSTGH*PSQEGP
Trigger: GGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCC...GTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp ACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGGCAGCACTGGCCACTaGCCTTCCCAGGAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: TSSQCQGLCRQLKGSGLPGSTGH*PSQEGP
Trigger: GGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCC...AGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CAGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCATCGATGGCGACATCCTaGGAGGCATGGGACTCTGCC +
Preference number: 5 (lower is better)
Translates to: QAQWQHWPLAFPGGSQTPSMATS*EAWDSA
Trigger: GGCAGAGTCCCATGCCTCCAAGGATGTCGCCATCGA...TGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp AGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAATCGATGGCGACATCCTaGGAGGCATGGGACTCTGCC +
Preference number: 5 (lower is better)
Translates to: RLSGSTGHLPSQEGPKPQSMATS*EAWDSA
Trigger: GGCAGAGTCCCATGCCTCCAAGGATGTCGCCATCGA...TTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CAGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACCATGAGCCACCGGTaGGAGGTGACAGACTGGAAG +
Preference number: 5 (lower is better)
Translates to: QAQWQHWPLAFPGGSQTPTMSHR*EVTDWK
Trigger: CTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGT...TGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp TGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGCACCATGAGCCACCGGTaGGAGGTGACAGACTGGAAG +
Preference number: 5 (lower is better)
Translates to: WQHWPLAFPGGSQTPTECTMSHR*EVTDWK
Trigger: CTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGT...GCACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCGGCAGCACTGGCCACTaGCCTTCCCAGGAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: HIWQIESPAANVRGCAGSGSTGH*PSQEGP
Trigger: GGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCC...GCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp GGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACGGTCAATTGGGAAAATaGGTCCCTGGGGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: GSVAALATCLPRRVPNPNGQLGK*VPGAAS
Trigger: GGAAGCAGCCCCAGGGACCAATTTTCCCAATTGACC...GTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS CCA 90 bp TGGAAGTACTTGAGGATCTCTGAATGGGCGGCCTCAACGTCCAGCTaGGCTCCTAGCACGTTCTCGTCGATCCTGGGGACAAGGCCGGGA +
Preference number: 5 (lower is better)
Translates to: WKYLRISEWAASTSS*APSTFSSILGTRPG
Trigger: TCCCGGCCTTGTCCCCAGGATCGACGAGAACGTGCTAGGAGCCCAGCTGGACGTTGAGGCCGCCCATTCAGAGATCCTCAAGTACTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377897.8
CDS-3UTR CAA 90 bp ACAGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCTGCGCTTTGCCAAGATaGTCAGCTTCTCCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: TGSVAALATCLPRRVPNPCALPR*SASPAW
Trigger: CCAAGCTGGAGAAGCTGACAATCTTGGCAAAGCGCA...GGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp ACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTGGTCAATTGGGAAAATaGGTCCCTGGGGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: TSSQCQGLCRQLKGSGLPGQLGK*VPGAAS
Trigger: GGAAGCAGCCCCAGGGACCAATTTTCCCAATTGACC...AGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS GCA 90 bp TATCATCACACCACTACACTCCAGCCTGACGGGTCTGCAGCGACTTaGAGGCAGACAGAAACTCCTGGGTCCGATCCCGGCAGGACATGG +
Preference number: 5 (lower is better)
Translates to: YHHTTTLQPDGSAAT*RQTETPGSDPGRTW
Trigger: CCATGTCCTGCCGGGATCGGACCCAGGAGTTTCTGTCTGCCTGCAAGTCGCTGCAGACCCGTCAGGCTGGAGTGTAGTGGTGTGATGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486437.1
ENST00000488303.5
CDS-3UTR CAA 90 bp AGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTGTTTCCGCGGGATCATaGAGACGCATAACCTCGGAC +
Preference number: 5 (lower is better)
Translates to: SHQQPMSGVVQAAEGLRAVSAGS*RRITSD
Trigger: GTCCGAGGTTATGCGTCTCAATGATCCCGCGGAAAC...AGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CAGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAGTCAGCTTCTCCAGCTaGGCAAATGTGTTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: QAQWQHWPLAFPGGSQTPVSFSS*ANVLLR
Trigger: CCTTAGCAACACATTTGCCAAGCTGGAGAAGCTGAC...TGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp AGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAATGCGCTTTGCCAAGATaGTCAGCTTCTCCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: RLSGSTGHLPSQEGPKPQCALPR*SASPAW
Trigger: CCAAGCTGGAGAAGCTGACAATCTTGGCAAAGCGCA...TTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CCCTGGGGCTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTTCGATGGCGACATCCTaGGAGGCATGGGACTCTGCC +
Preference number: 5 (lower is better)
Translates to: PWGCFLSSLTGRWVRASSSMATS*EAWDSA
Trigger: GGCAGAGTCCCATGCCTCCAAGGATGTCGCCATCGA...AGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAGCCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCAGGATGAGGAAGATTTaGACCATGAGCCACCGGTTG +
Preference number: 5 (lower is better)
Translates to: HQQPMSGVVQAAEGLRAPRMRKI*TMSHRL
Trigger: CAACCGGTGGCTCATGGTCAAAATCTTCCTCATCCT...GGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp TGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTCTCCCAAGTACCCTGCAGGCAGCACTGGCCACTaGCCTTCCCAGGAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: WSFLAVPGKQGLSPKYPAGSTGH*PSQEGP
Trigger: GGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCC...TGCAGGGTACTTGGGAGAAAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp ACAGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAGCACATTTGGCAGATaGAGTCACCAGCAGCCAATG +
Preference number: 5 (lower is better)
Translates to: TGSVAALATCLPRRVPNPSTFGR*SHQQPM
Trigger: CATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCT...GGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS CCA 90 bp CGGCCTCAACGTCCAGCTGGGCTCCTAGCACGTTCTCGTCGATCCTaGGGACAAGGCCGGGAGAAGAGGAAACAAAAGGACACTCTGAAT +
Preference number: 5 (lower is better)
Translates to: RPQRPAGLLARSRRS*GQGREKRKQKDTLN
Trigger: ATTCAGAGTGTCCTTTTGTTTCCTCTTCTCCCGGCCTTGTCCCCAGGATCGACGAGAACGTGCTAGGAGCCCAGCTGGACGTTGAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377897.8
CDS-3UTR CAA 90 bp AGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAATCTTTCCCAATGCGCTaGGCCATGAGGGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: RLSGSTGHLPSQEGPKPQSFPMR*AMRVNS
Trigger: TGAATTCACCCTCATGGCCAAGCGCATTGGGAAAGA...TTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
CDS-3UTR CAA 90 bp TCCCTGGGGCTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCGAGACCACAATGGTGTaGGAGTGGGTCTGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: SLGLLPLFTHRKVGKGIIETTMV*EWVCRC
Trigger: GCACCTGCAGACCCACTCCAACACCATTGTGGTCTC...GATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAGCCCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp GTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTACCATGAGCCACCGGTaGGAGGTGACAGACTGGAAG +
Preference number: 5 (lower is better)
Translates to: VGDQGQWSFLAVPGKQGLTMSHR*EVTDWK
Trigger: CTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGT...AAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp ACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTAGGATGAGGAAGATTTaGACCATGAGCCACCGGTTG +
Preference number: 5 (lower is better)
Translates to: TSSQCQGLCRQLKGSGLPRMRKI*TMSHRL
Trigger: CAACCGGTGGCTCATGGTCAAAATCTTCCTCATCCT...AGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp ATTTTGACCATGAGCCACCGGTTGGAGGTGACAGACTGGAAGTACTTGAGGATCGGCAGCACTGGCCACTaGCCTTCCCAGGAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: ILTMSHRLEVTDWKYLRIGSTGH*PSQEGP
Trigger: GGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCC...GATCCTCAAGTACTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGTCAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp TGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGCAGCACATTTGGCAGATaGAGTCACCAGCAGCCAATG +
Preference number: 5 (lower is better)
Translates to: WQHWPLAFPGGSQTPTECSTFGR*SHQQPM
Trigger: CATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCT...GCACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp ACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTCCCTAGCACATTTGGCAGATaGAGTCACCAGCAGCCAATG +
Preference number: 5 (lower is better)
Translates to: TSSQCQGLCRQLKGSGLPSTFGR*SHQQPM
Trigger: CATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCT...AGGGAGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS TCA 90 bp GCTGCTGCTACTGCCAGCAGTTGCAGGGGACAGGACCTGTGTCTTTaGGAGACCCAGGTAGACACCCTGATCCGTGTTCTTAGACCCGTA +
Preference number: 5 (lower is better)
Translates to: AAATASSCRGQDLCL*ETQVDTLIRVLRPV
Trigger: TACGGGTCTAAGAACACGGATCAGGGTGTCTACCTGGGTCTCTCAAAGACACAGGTCCTGTCCCCTGCAACTGCTGGCAGTAGCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000486437.1
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CACCGGTTGGAGGTGACAGACTGGAAGTACTTGAGGATCTCTGAATGGGCGGCCGTTTCCGCGGGATCATaGAGACGCATAACCTCGGAC +
Preference number: 5 (lower is better)
Translates to: HRLEVTDWKYLRISEWAAVSAGS*RRITSD
Trigger: GTCCGAGGTTATGCGTCTCAATGATCCCGCGGAAAC...GGCCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAACCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp GTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTGGTGAATTCACTGCGTaGTCGGACAGCACGCAAAGC +
Preference number: 5 (lower is better)
Translates to: VGDQGQWSFLAVPGKQGLGEFTA*SDSTQS
Trigger: GCTTTGCGTGCTGTCCGACAACGCAGTGAATTCACC...AAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
CDS-3UTR CAA 90 bp CCCTGGGGCTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTGGTGAATTCACTGCGTaGTCGGACAGCACGCAAAGC +
Preference number: 5 (lower is better)
Translates to: PWGCFLSSLTGRWVRASSGEFTA*SDSTQS
Trigger: GCTTTGCGTGCTGTCCGACAACGCAGTGAATTCACC...AGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAGCCCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
CDS-3UTR CAA 90 bp AGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGGCTTCTTTCCCAATGCGCTaGGCCATGAGGGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: SHQQPMSGVVQAAEGLRASFPMR*AMRVNS
Trigger: TGAATTCACCCTCATGGCCAAGCGCATTGGGAAAGA...AGCCCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
CDS-3UTR CAA 90 bp GCTGCAGCTGCTGGCTGGTCCGAGAGTCCATCATGTCGATGGCGACATCCTTGGGTCAGCTTCTCCAGCTaGGCAAATGTGTTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: AAAAGWSESPSCRWRHPWVSFSS*ANVLLR
Trigger: CCTTAGCAACACATTTGCCAAGCTGGAGAAGCTGAC...CCAAGGATGTCGCCATCGACATGATGGACTCTCGGACCAGCCAGCAGCTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
CDS-3UTR CAA 90 bp AGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTAGGATGAGGAAGATTTaGACCATGAGCCACCGGTTG +
Preference number: 5 (lower is better)
Translates to: SGSTGHLPSQEGPKPQQSRMRKI*TMSHRL
Trigger: CAACCGGTGGCTCATGGTCAAAATCTTCCTCATCCT...ACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CCCTGGGGCTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTGGGCATCATCTCCCTTaGCTGCCAACGCTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: PWGCFLSSLTGRWVRASSGHHLP*LPTLPL
Trigger: CAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCCC...AGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAGCCCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCGTTTCCGCGGGATCATaGAGACGCATAACCTCGGAC +
Preference number: 5 (lower is better)
Translates to: LFTHRKVGKGIISLCCQRVSAGS*RRITSD
Trigger: GTCCGAGGTTATGCGTCTCAATGATCCCGCGGAAAC...GCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CCCTGGGGCTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTACAGGACCTGTGTCTTaGAGAGACCCAGGTAGACAC +
Preference number: 5 (lower is better)
Translates to: PWGCFLSSLTGRWVRASSTGPVS*RDPGRH
Trigger: GTGTCTACCTGGGTCTCTCAAAGACACAGGTCCTGT...AGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAGCCCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp TCCCTGGGGCTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCACAGGACCTGTGTCTTaGAGAGACCCAGGTAGACAC +
Preference number: 5 (lower is better)
Translates to: SLGLLPLFTHRKVGKGIITGPVS*RDPGRH
Trigger: GTGTCTACCTGGGTCTCTCAAAGACACAGGTCCTGT...GATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAGCCCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGGCAAAGCTGGCTTATTaGTCTGGATTCCATTCTGAC +
Preference number: 5 (lower is better)
Translates to: QWQHWPLAFPGGSQTPTEAKLAY*SGFHSD
Trigger: GTCAGAATGGAATCCAGACAAATAAGCCAGCTTTGC...CTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
CDS-3UTR CAA 90 bp TCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCCGGTGAATTCACTGCGTaGTCGGACAGCACGCAAAGC +
Preference number: 5 (lower is better)
Translates to: SLTGRWVRASSPFAANASGEFTA*SDSTQS
Trigger: GCTTTGCGTGCTGTCCGACAACGCAGTGAATTCACC...GGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
CDS-3UTR CAA 90 bp GGGTGGATGGAAGCAGGTGAACTGGGTCCCATGGGTGGGCAGAATTCACTCTATGGTGAATTCACTGCGTaGTCGGACAGCACGCAAAGC +
Preference number: 5 (lower is better)
Translates to: GWMEAGELGPMGGQNSLYGEFTA*SDSTQS
Trigger: GCTTTGCGTGCTGTCCGACAACGCAGTGAATTCACC...ATAGAGTGAATTCTGCCCACCCATGGGACCCAGTTCACCTGCTTCCATCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CAA 90 bp TCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGATCATCAAAGAGGGACTaGCGCTTTGCCAAGATTGTC +
Preference number: 5 (lower is better)
Translates to: SVAALATCLPRRVPNPNRSSKRD*RFAKIV
Trigger: GACAATCTTGGCAAAGCGCAAGTCCCTCTTTGATGA...TCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CAGGCTCAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCACTGGAGCTGAGCAATTaGTTTGTTGAGGCTATTGAT +
Preference number: 5 (lower is better)
Translates to: QAQWQHWPLAFPGGSQTPLELSN*FVEAID
Trigger: ATCAATAGCCTCAACAAACAAATTGCTCAGCTCCAG...TGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTGAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp TCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTGAGACCACAATGGTGTaGGAGTGGGTCTGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: SSLTGRWVRASSPFAANAETTMV*EWVCRC
Trigger: GCACCTGCAGACCCACTCCAACACCATTGTGGTCTC...AGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CAGTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGAGCCCAACTCAACAATaGTCGACTCAATGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: QWQHWPLAFPGGSQTPTESPTQQ*STQCSA
Trigger: TGCAGAACATTGAGTCGACAATTGTTGAGTTGGGCT...CTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp GGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTCTCCCAAGTAACCATGAGCCACCGGTaGGAGGTGACAGACTGGAAG +
Preference number: 5 (lower is better)
Translates to: GAVVILSSSRETGPFSQVTMSHR*EVTDWK
Trigger: CTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGT...TACTTGGGAGAAAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTCTCCCAAGGGGCATCATCTCCCTTaGCTGCCAACGCTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: QGQWSFLAVPGKQGLSPKGHHLP*LPTLPL
Trigger: CAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCCC...CTTGGGAGAAAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CCCAGCTGGCCTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAGTTTCCGCGGGATCATaGAGACGCATAACCTCGGAC +
Preference number: 5 (lower is better)
Translates to: PSWPLLPSSHFTAEFKSRVSAGS*RRITSD
Trigger: GTCCGAGGTTATGCGTCTCAATGATCCCGCGGAAAC...TCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAGGCCAGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCACAGGACCTGTGTCTTaGAGAGACCCAGGTAGACAC +
Preference number: 5 (lower is better)
Translates to: HIWQIESPAANVRGCAGSTGPVS*RDPGRH
Trigger: GTGTCTACCTGGGTCTCTCAAAGACACAGGTCCTGT...GCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp GGAGAAAACGAGCTGCAGCACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCGAGACCACAATGGTGTaGGAGTGGGTCTGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: GENELQHIWQIESPAANVETTMV*EWVCRC
Trigger: GCACCTGCAGACCCACTCCAACACCATTGTGGTCTC...GACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCTGCAGCTCGTTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294179.8
ENST00000377897.8
CDS-3UTR CAA 90 bp TACTGTTCTACTTGCCACTGTATCTCCCGCACCTGGAACAGTGCCTCACATGAATCGATGGCGACATCCTaGGAGGCATGGGACTCTGCC +
Preference number: 5 (lower is better)
Translates to: YCSTCHCISRTWNSASHESMATS*EAWDSA
Trigger: GGCAGAGTCCCATGCCTCCAAGGATGTCGCCATCGA...TTCATGTGAGGCACTGTTCCAGGTGCGGGAGATACAGTGGCAAGTAGAACAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CAA 90 bp ATTTTGACCATGAGCCACCGGTTGGAGGTGACAGACTGGAAGTACTTGAGGATCTCGATGGCGACATCCTaGGAGGCATGGGACTCTGCC +
Preference number: 5 (lower is better)
Translates to: ILTMSHRLEVTDWKYLRISMATS*EAWDSA
Trigger: GGCAGAGTCCCATGCCTCCAAGGATGTCGCCATCGA...GATCCTCAAGTACTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGTCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp ATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTCTCCCAAGTACCCTGCACAGGCGGGCATCATCTCCCTTaGCTGCCAACGCTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: ILSSSRETGPFSQVPCTGGHHLP*LPTLPL
Trigger: CAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCCC...GCCTGTGCAGGGTACTTGGGAGAAAGGCCCTGTTTCCCTGGAACTGCTAAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGGGCATCATCTCCCTTaGCTGCCAACGCTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: LSSLTGRWVRASSPFAANGHHLP*LPTLPL
Trigger: CAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCCC...GTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CCCAGCTGGCCTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAGGTCAATTGGGAAAATaGGTCCCTGGGGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: PSWPLLPSSHFTAEFKSRGQLGK*VPGAAS
Trigger: GGAAGCAGCCCCAGGGACCAATTTTCCCAATTGACC...TCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAGGCCAGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS CCA 90 bp GGCCATGAGGGTGAATTCACTGCGTTGTCGGACAGCACGCAAAGCTaGCTTATTTGTCTGGATTCCATTCTGACGGGTCTGCAGCGACTT +
Preference number: 5 (lower is better)
Translates to: GHEGEFTALSDSTQS*LICLDSILTGLQRL
Trigger: AAGTCGCTGCAGACCCGTCAGAATGGAATCCAGACAAATAAGCCAGCTTTGCGTGCTGTCCGACAACGCAGTGAATTCACCCTCATGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
CDS-3UTR CAA 90 bp GGTGGGGGATCAGGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTGCAAAGCTGGCTTATTaGTCTGGATTCCATTCTGAC +
Preference number: 5 (lower is better)
Translates to: GGGSGAVVILSSSRETGPAKLAY*SGFHSD
Trigger: GTCAGAATGGAATCCAGACAAATAAGCCAGCTTTGC...AGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCCTGATCCCCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
CDS-3UTR CAA 90 bp GATGCCAATCCACGGGGAAGAGAAAGCTCCTCTGTTTGGGGCGAGAGAGTGTATTGCGCTTTGCCAAGATaGTCAGCTTCTCCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: DANPRGRESSSVWGERVYCALPR*SASPAW
Trigger: CCAAGCTGGAGAAGCTGACAATCTTGGCAAAGCGCA...ATACACTCTCTCGCCCCAAACAGAGGAGCTTTCTCTTCCCCGTGGATTGGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CAA 90 bp AGGCTGGAGAGGGTTTATAAAAATCTCCTAGTGGAAACAACCTCCCCCACTGGCGAGACCACAATGGTGTaGGAGTGGGTCTGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: RLERVYKNLLVETTSPTGETTMV*EWVCRC
Trigger: GCACCTGCAGACCCACTCCAACACCATTGTGGTCTC...GCCAGTGGGGGAGGTTGTTTCCACTAGGAGATTTTTATAAACCCTCTCCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp AAAGCAGCTCCAGACAGACTTTACTGTTCTACTTGCCACTGTATCTCCCGCACCGAGACCACAATGGTGTaGGAGTGGGTCTGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: KAAPDRLYCSTCHCISRTETTMV*EWVCRC
Trigger: GCACCTGCAGACCCACTCCAACACCATTGTGGTCTC...GGTGCGGGAGATACAGTGGCAAGTAGAACAGTAAAGTCTGTCTGGAGCTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CAA 90 bp CACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCCTTTGGAGGATGAGGAAGATTTaGACCATGAGCCACCGGTTG +
Preference number: 5 (lower is better)
Translates to: HRKVGKGIISLCCQRFLWRMRKI*TMSHRL
Trigger: CAACCGGTGGCTCATGGTCAAAATCTTCCTCATCCT...CCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp TGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTCTCCCAAGTACCCTGCAGGTCAATTGGGAAAATaGGTCCCTGGGGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: WSFLAVPGKQGLSPKYPAGQLGK*VPGAAS
Trigger: GGAAGCAGCCCCAGGGACCAATTTTCCCAATTGACC...TGCAGGGTACTTGGGAGAAAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp GGATGGAAGCAGGTGAACTGGGTCCCATGGGTGGGCAGAATTCACTCTATCTTCTCTTTCCCAATGCGCTaGGCCATGAGGGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: GWKQVNWVPWVGRIHSIFSFPMR*AMRVNS
Trigger: TGAATTCACCCTCATGGCCAAGCGCATTGGGAAAGA...GAAGATAGAGTGAATTCTGCCCACCCATGGGACCCAGTTCACCTGCTTCCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CAA 90 bp CACCGGTTGGAGGTGACAGACTGGAAGTACTTGAGGATCTCTGAATGGGCGGCCAGCTTGGCAAATGTGTaGCTAAGGTCTTTCCCAATG +
Preference number: 5 (lower is better)
Translates to: HRLEVTDWKYLRISEWAASLANV*LRSFPM
Trigger: CATTGGGAAAGACCTTAGCAACACATTTGCCAAGCT...GGCCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAACCGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp TCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTGTCAGCTTCTCCAGCTaGGCAAATGTGTTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: SSLTGRWVRASSPFAANAVSFSS*ANVLLR
Trigger: CCTTAGCAACACATTTGCCAAGCTGGAGAAGCTGAC...AGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp GAAAACGAGCTGCAGCACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGGTGCGCTTTGCCAAGATaGTCAGCTTCTCCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: ENELQHIWQIESPAANVRCALPR*SASPAW
Trigger: CCAAGCTGGAGAAGCTGACAATCTTGGCAAAGCGCA...CCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCTGCAGCTCGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
CDS-3UTR CAA 90 bp TGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTCTCCCAAGTACCCTGCATGCGCTTTGCCAAGATaGTCAGCTTCTCCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: WSFLAVPGKQGLSPKYPACALPR*SASPAW
Trigger: CCAAGCTGGAGAAGCTGACAATCTTGGCAAAGCGCA...TGCAGGGTACTTGGGAGAAAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp GTGGCAGCACTGGCCACTTGCCTTCCCAGGAGGGTCCCAAACCCCAACAGAGTGTGTTTGTTGAGGCTATaGATGTCCTGTTTGATGATA +
Preference number: 5 (lower is better)
Translates to: VAALATCLPRRVPNPNRVCLLRL*MSCLMI
Trigger: TATCATCAAACAGGACATCAATAGCCTCAACAAACA...CACTCTGTTGGGGTTTGGGACCCTCCTGGGAAGGCAAGTGGCCAGTGCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp TTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGACCGATTTGAAGTCATaGGACATAGAAGCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: LSHQQPMSGVVQAAEGLRTDLKS*DIEASF
Trigger: GAAACTGGCTTCTATGTCCAATGACTTCAAATCGGT...CCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp AGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGCCCAACTCAACAATaGTCGACTCAATGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: RLSHQQPMSGVVQAAEGLSPTQQ*STQCSA
Trigger: TGCAGAACATTGAGTCGACAATTGTTGAGTTGGGCT...GAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp AGGCTGGAGAGGGTTTATAAAAATCTCCTAGTGGAAACAACCTCCCCCACTGGCGGTCAATTGGGAAAATaGGTCCCTGGGGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: RLERVYKNLLVETTSPTGGQLGK*VPGAAS
Trigger: GGAAGCAGCCCCAGGGACCAATTTTCCCAATTGACC...GCCAGTGGGGGAGGTTGTTTCCACTAGGAGATTTTTATAAACCCTCTCCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp TTGGAGGTGACAGACTGGAAGTACTTGAGGATCTCTGAATGGGCGGCCTCAACGAGCACATTTGGCAGATaGAGTCACCAGCAGCCAATG +
Preference number: 5 (lower is better)
Translates to: LEVTDWKYLRISEWAASTSTFGR*SHQQPM
Trigger: CATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCT...CGTTGAGGCCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp GATGCCAATCCACGGGGAAGAGAAAGCTCCTCTGTTTGGGGCGAGAGAGTGTATAGAAAGCTCCTCTGTTaGGGGCGAGAGAGTGTATCT +
Preference number: 5 (lower is better)
Translates to: DANPRGRESSSVWGERVYRKLLC*GRESVS
Trigger: AGATACACTCTCTCGCCCCAAACAGAGGAGCTTTCT...ATACACTCTCTCGCCCCAAACAGAGGAGCTTTCTCTTCCCCGTGGATTGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS CCA 90 bp GGCCATGAGGGTGAATTCACTGCGTTGTCGGACAGCACGCAAAGCTaGCTTATTTGTCTGGATTCCATTCTGGGCAACATAGTGAGACAC +
Preference number: 5 (lower is better)
Translates to: GHEGEFTALSDSTQS*LICLDSILGNIVRH
Trigger: GTGTCTCACTATGTTGCCCAGAATGGAATCCAGACAAATAAGCCAGCTTTGCGTGCTGTCCGACAACGCAGTGAATTCACCCTCATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488303.5
CDS-3UTR CAA 90 bp TTCACTGCGTTGTCGGACAGCACGCAAAGCTGGCTTATTTGTCTGGATTCCATTGTTTCCGCGGGATCATaGAGACGCATAACCTCGGAC +
Preference number: 5 (lower is better)
Translates to: FTALSDSTQSWLICLDSIVSAGS*RRITSD
Trigger: GTCCGAGGTTATGCGTCTCAATGATCCCGCGGAAAC...AATGGAATCCAGACAAATAAGCCAGCTTTGCGTGCTGTCCGACAACGCAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486437.1
CDS-3UTR CAA 90 bp AGGCTGGAGAGGGTTTATAAAAATCTCCTAGTGGAAACAACCTCCCCCACTGGCACAGGACCTGTGTCTTaGAGAGACCCAGGTAGACAC +
Preference number: 5 (lower is better)
Translates to: RLERVYKNLLVETTSPTGTGPVS*RDPGRH
Trigger: GTGTCTACCTGGGTCTCTCAAAGACACAGGTCCTGT...GCCAGTGGGGGAGGTTGTTTCCACTAGGAGATTTTTATAAACCCTCTCCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp ACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCCTTTGGGGCAAAGCTGGCTTATTaGTCTGGATTCCATTCTGAC +
Preference number: 5 (lower is better)
Translates to: TGRWVRASSPFAANASFGAKLAY*SGFHSD
Trigger: GTCAGAATGGAATCCAGACAAATAAGCCAGCTTTGC...CCCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
CDS-3UTR CAA 90 bp GAAAACGAGCTGCAGCACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGGGTCAGCTTCTCCAGCTaGGCAAATGTGTTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: ENELQHIWQIESPAANVRVSFSS*ANVLLR
Trigger: CCTTAGCAACACATTTGCCAAGCTGGAGAAGCTGAC...CCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCTGCAGCTCGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
CDS-3UTR CAA 90 bp ACTTTAAGATGCCAATCCACGGGGAAGAGAAAGCTCCTCTGTTTGGGGCGAGAGGTCAGCTTCTCCAGCTaGGCAAATGTGTTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: TLRCQSTGKRKLLCLGREVSFSS*ANVLLR
Trigger: CCTTAGCAACACATTTGCCAAGCTGGAGAAGCTGAC...CTCTCGCCCCAAACAGAGGAGCTTTCTCTTCCCCGTGGATTGGCATCTTAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CAA 90 bp TCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCATCAAAGAGGGACTaGCGCTTTGCCAAGATTGTC +
Preference number: 5 (lower is better)
Translates to: SSLTGRWVRASSPFAANASSKRD*RFAKIV
Trigger: GACAATCTTGGCAAAGCGCAAGTCCCTCTTTGATGA...AGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp GATGCCAATCCACGGGGAAGAGAAAGCTCCTCTGTTTGGGGCGAGAGAGTGTATTCATCAAAGAGGGACTaGCGCTTTGCCAAGATTGTC +
Preference number: 5 (lower is better)
Translates to: DANPRGRESSSVWGERVYSSKRD*RFAKIV
Trigger: GACAATCTTGGCAAAGCGCAAGTCCCTCTTTGATGA...ATACACTCTCTCGCCCCAAACAGAGGAGCTTTCTCTTCCCCGTGGATTGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CAA 90 bp TTGGAGGTGACAGACTGGAAGTACTTGAGGATCTCTGAATGGGCGGCCTCAACGTCATCAAAGAGGGACTaGCGCTTTGCCAAGATTGTC +
Preference number: 5 (lower is better)
Translates to: LEVTDWKYLRISEWAASTSSKRD*RFAKIV
Trigger: GACAATCTTGGCAAAGCGCAAGTCCCTCTTTGATGA...CGTTGAGGCCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp AGCACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCATCATCAAAGAGGGACTaGCGCTTTGCCAAGATTGTC +
Preference number: 5 (lower is better)
Translates to: STFGRLSHQQPMSGVVQASSKRD*RFAKIV
Trigger: GACAATCTTGGCAAAGCGCAAGTCCCTCTTTGATGA...TGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTTCAGAGACCACAATGGTGTaGGAGTGGGTCTGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: LPSSHFTAEFKSRTLCVSETTMV*EWVCRC
Trigger: GCACCTGCAGACCCACTCCAACACCATTGTGGTCTC...TGAAACACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CACCGGTTGGAGGTGACAGACTGGAAGTACTTGAGGATCTCTGAATGGGCGGCCACCGATTTGAAGTCATaGGACATAGAAGCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: HRLEVTDWKYLRISEWAATDLKS*DIEASF
Trigger: GAAACTGGCTTCTATGTCCAATGACTTCAAATCGGT...GGCCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAACCGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp TGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTTACCATGAGCCACCGGTaGGAGGTGACAGACTGGAAG +
Preference number: 5 (lower is better)
Translates to: CSLPVTSQQSSNLEPCVFTMSHR*EVTDWK
Trigger: CTTCCAGTCTGTCACCTCCAACCGGTGGCTCATGGT...AAACACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CTGGAGAGGGTTTATAAAAATCTCCTAGTGGAAACAACCTCCCCCACTGGCCCCAGCACATTTGGCAGATaGAGTCACCAGCAGCCAATG +
Preference number: 5 (lower is better)
Translates to: LERVYKNLLVETTSPTGPSTFGR*SHQQPM
Trigger: CATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCT...GGGGCCAGTGGGGGAGGTTGTTTCCACTAGGAGATTTTTATAAACCCTCTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp TTAGCTGAGTGGTGCATCCATGTAGTCCCAGCTGCTCAGGAGGCTGAGGAAAGAGCAAAGCTGGCTTATTaGTCTGGATTCCATTCTGGG +
Preference number: 5 (lower is better)
Translates to: LAEWCIHVVPAAQEAEERAKLAY*SGFHSG
Trigger: CCCAGAATGGAATCCAGACAAATAAGCCAGCTTTGC...TCTTTCCTCAGCCTCCTGAGCAGCTGGGACTACATGGATGCACCACTCAGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486437.1
CDS-3UTR CAA 90 bp CTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTCTTTCCCAATGCGCTaGGCCATGAGGGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: LCSLPVTSQQSSNLEPCVSFPMR*AMRVNS
Trigger: TGAATTCACCCTCATGGCCAAGCGCATTGGGAAAGA...CACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
CDS-3UTR CAA 90 bp ACAATGAGGATGAGGAAGATTTTGACCATGAGCCACCGGTTGGAGGTGACAGACTCTTTCCCAATGCGCTaGGCCATGAGGGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: TMRMRKILTMSHRLEVTDSFPMR*AMRVNS
Trigger: TGAATTCACCCTCATGGCCAAGCGCATTGGGAAAGA...GTCTGTCACCTCCAACCGGTGGCTCATGGTCAAAATCTTCCTCATCCTCATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377897.8
ENST00000491231.5
CDS-3UTR CAA 90 bp CTGCTTCCTCTCTTCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCAGCTTGGCAAATGTGTaGCTAAGGTCTTTCCCAATG +
Preference number: 5 (lower is better)
Translates to: LLPLFTHRKVGKGIISLCSLANV*LRSFPM
Trigger: CATTGGGAAAGACCTTAGCAACACATTTGCCAAGCT...GCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGAAGAGAGGAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGGTCAGCTTCTCCAGCTaGGCAAATGTGTTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: LCSLPVTSQQSSNLEPCVVSFSS*ANVLLR
Trigger: CCTTAGCAACACATTTGCCAAGCTGGAGAAGCTGAC...CACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp TGCTGCCAACGCTTCCTTTGGGAGAGGCTGGAGAGGGTTTATAAAAATCTCCTATGCGCTTTGCCAAGATaGTCAGCTTCTCCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: CCQRFLWERLERVYKNLLCALPR*SASPAW
Trigger: CCAAGCTGGAGAAGCTGACAATCTTGGCAAAGCGCA...TAGGAGATTTTTATAAACCCTCTCCAGCCTCTCCCAAAGGAAGCGTTGGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp TTGAGTCACCAGCAGCCAATGTCAGGGGTTGTGCAGGCAGCTGAAGGGCTCAGGTGTTTGTTGAGGCTATaGATGTCCTGTTTGATGATA +
Preference number: 5 (lower is better)
Translates to: LSHQQPMSGVVQAAEGLRCLLRL*MSCLMI
Trigger: TATCATCAAACAGGACATCAATAGCCTCAACAAACA...CCTGAGCCCTTCAGCTGCCTGCACAACCCCTGACATTGGCTGCTGGTGACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp ACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCCTTTGGGCTGGAGCTGAGCAATTaGTTTGTTGAGGCTATTGAT +
Preference number: 5 (lower is better)
Translates to: TGRWVRASSPFAANASFGLELSN*FVEAID
Trigger: ATCAATAGCCTCAACAAACAAATTGCTCAGCTCCAG...CCCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCCTTTGGACCGATTTGAAGTCATaGGACATAGAAGCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: HRKVGKGIISLCCQRFLWTDLKS*DIEASF
Trigger: GAAACTGGCTTCTATGTCCAATGACTTCAAATCGGT...CCAAAGGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp TCACTCACAGGAAGGTGGGTAAGGGCATCATCTCCCTTTGCTGCCAACGCTTCCACCGATTTGAAGTCATaGGACATAGAAGCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: SLTGRWVRASSPFAANASTDLKS*DIEASF
Trigger: GAAACTGGCTTCTATGTCCAATGACTTCAAATCGGT...GGAAGCGTTGGCAGCAAAGGGAGATGATGCCCTTACCCACCTTCCTGTGAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp GCAGCTCCAGACAGACTTTACTGTTCTACTTGCCACTGTATCTCCCGCACCTGGAGCCCAACTCAACAATaGTCGACTCAATGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: AAPDRLYCSTCHCISRTWSPTQQ*STQCSA
Trigger: TGCAGAACATTGAGTCGACAATTGTTGAGTTGGGCT...CCAGGTGCGGGAGATACAGTGGCAAGTAGAACAGTAAAGTCTGTCTGGAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CAA 90 bp GGGGCAGTGGTCATTCTTAGCAGTTCCAGGGAAACAGGGCCTTTCTCCCAAGTAAGCCCAACTCAACAATaGTCGACTCAATGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: GAVVILSSSRETGPFSQVSPTQQ*STQCSA
Trigger: TGCAGAACATTGAGTCGACAATTGTTGAGTTGGGCT...TACTTGGGAGAAAGGCCCTGTTTCCCTGGAACTGCTAAGAATGACCACTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp AGCAGCTCCAGACAGACTTTACTGTTCTACTTGCCACTGTATCTCCCGCACCTGACTTTACTGTTCTACTaGCCACTGTATCTCCCGCAC +
Preference number: 5 (lower is better)
Translates to: SSSRQTLLFYLPLYLPHLTLLFY*PLYLPH
Trigger: GTGCGGGAGATACAGTGGCAAGTAGAACAGTAAAGT...CAGGTGCGGGAGATACAGTGGCAAGTAGAACAGTAAAGTCTGTCTGGAGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS TCA 90 bp ACCTTAACAGTTAAAAGCAGGTTCAAAGCCCACATGCTCTGGGTTTaGATCCCAGCTCTAGCACTTACTAGCCTTGTGACCCTGGACAGG +
Preference number: 5 (lower is better)
Translates to: TLTVKSRFKAHMLWV*IPALALTSLVTLDR
Trigger: CCTGTCCAGGGTCACAAGGCTAGTAAGTGCTAGAGCTGGGATTCAAACCCAGAGCATGTGGGCTTTGAACCTGCTTTTAACTGTTAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677401.1
CDS-3UTR CAA 90 bp ACGCAAAGCTGGCTTATTTGTCTGGATTCCATTCTGGGCAACATAGTGAGACACACAGGACCTGTGTCTTaGAGAGACCCAGGTAGACAC +
Preference number: 5 (lower is better)
Translates to: TQSWLICLDSILGNIVRHTGPVS*RDPGRH
Trigger: GTGTCTACCTGGGTCTCTCAAAGACACAGGTCCTGT...GTGTCTCACTATGTTGCCCAGAATGGAATCCAGACAAATAAGCCAGCTTTGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486437.1
CDS-3UTR CAA 90 bp TGTCGACTCAATGTTCTGCATGGTGTCTGCCCGACTCTGGATGTAGGAATCCTGGCAAAGCTGGCTTATTaGTCTGGATTCCATTCTGAC +
Preference number: 5 (lower is better)
Translates to: CRLNVLHGVCPTLDVGILAKLAY*SGFHSD
Trigger: GTCAGAATGGAATCCAGACAAATAAGCCAGCTTTGC...CAGGATTCCTACATCCAGAGTCGGGCAGACACCATGCAGAACATTGAGTCGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491231.5
CDS-3UTR CAA 90 bp TGCCACTGTATCTCCCGCACCTGGAACAGTGCCTCACATGAACAGGTGCTCAATACCGATTTGAAGTCATaGGACATAGAAGCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: CHCISRTWNSASHEQVLNTDLKS*DIEASF
Trigger: GAAACTGGCTTCTATGTCCAATGACTTCAAATCGGT...ATTGAGCACCTGTTCATGTGAGGCACTGTTCCAGGTGCGGGAGATACAGTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CAA 90 bp TTGGAGGTGACAGACTGGAAGTACTTGAGGATCTCTGAATGGGCGGCCTCAACGACCGATTTGAAGTCATaGGACATAGAAGCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: LEVTDWKYLRISEWAASTTDLKS*DIEASF
Trigger: GAAACTGGCTTCTATGTCCAATGACTTCAAATCGGT...CGTTGAGGCCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp TGTCGACTCAATGTTCTGCATGGTGTCTGCCCGACTCTGGATGTAGGAATCCTGAGCCCAACTCAACAATaGTCGACTCAATGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: CRLNVLHGVCPTLDVGILSPTQQ*STQCSA
Trigger: TGCAGAACATTGAGTCGACAATTGTTGAGTTGGGCT...CAGGATTCCTACATCCAGAGTCGGGCAGACACCATGCAGAACATTGAGTCGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp GAGAAAACGAGCTGCAGCACATTTGGCAGATTGAGTCACCAGCAGCCAATGTCAAGCTTGGCAAATGTGTaGCTAAGGTCTTTCCCAATG +
Preference number: 5 (lower is better)
Translates to: EKTSCSTFGRLSHQQPMSSLANV*LRSFPM
Trigger: CATTGGGAAAGACCTTAGCAACACATTTGCCAAGCT...TGACATTGGCTGCTGGTGACTCAATCTGCCAAATGTGCTGCAGCTCGTTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294179.8
ENST00000377897.8
CDS-3UTR CAA 90 bp CTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGAGCTTGGCAAATGTGTaGCTAAGGTCTTTCCCAATG +
Preference number: 5 (lower is better)
Translates to: LCSLPVTSQQSSNLEPCVSLANV*LRSFPM
Trigger: CATTGGGAAAGACCTTAGCAACACATTTGCCAAGCT...CACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CAAAGCAGCTCCAGACAGACTTTACTGTTCTACTTGCCACTGTATCTCCCGCACAGCTTGGCAAATGTGTaGCTAAGGTCTTTCCCAATG +
Preference number: 5 (lower is better)
Translates to: QSSSRQTLLFYLPLYLPHSLANV*LRSFPM
Trigger: CATTGGGAAAGACCTTAGCAACACATTTGCCAAGCT...GTGCGGGAGATACAGTGGCAAGTAGAACAGTAAAGTCTGTCTGGAGCTGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CAA 90 bp TGTTCTACTTGCCACTGTATCTCCCGCACCTGGAACAGTGCCTCACATGAACAGCTGGAGCTGAGCAATTaGTTTGTTGAGGCTATTGAT +
Preference number: 5 (lower is better)
Translates to: CSTCHCISRTWNSASHEQLELSN*FVEAID
Trigger: ATCAATAGCCTCAACAAACAAATTGCTCAGCTCCAG...CTGTTCATGTGAGGCACTGTTCCAGGTGCGGGAGATACAGTGGCAAGTAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CAA 90 bp GAAGCAGGTGAACTGGGTCCCATGGGTGGGCAGAATTCACTCTATCTTCCAAAAGTGCTCAATAAAAACTaGTTGGGTGGATGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: EAGELGPMGGQNSLYLPKVLNKN*LGGWKQ
Trigger: CTGCTTCCATCCACCCAACAAGTTTTTATTGAGCAC...TTTTGGAAGATAGAGTGAATTCTGCCCACCCATGGGACCCAGTTCACCTGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS GCA 90 bp CAAAAGGACACTCTGAATGGTTTCCTCCTGTTCCTTAACCATGTGTaGCAACTGCTGAAAGATGGAGCCCAACTCAACAATTGTCGACTC +
Preference number: 5 (lower is better)
Translates to: QKDTLNGFLLFLNHV*QLLKDGAQLNNCRL
Trigger: GAGTCGACAATTGTTGAGTTGGGCTCCATCTTTCAGCAGTTGGCACACATGGTTAAGGAACAGGAGGAAACCATTCAGAGTGTCCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377897.8
CDS GCA 90 bp TGTATCTCACCTCTGAATGGTTTCCTCCTGTTCCTTAACCATGTGTaGCAACTGCTGAAAGATGGAGCCCAACTCAACAATTGTCGACTC +
Preference number: 5 (lower is better)
Translates to: CISPLNGFLLFLNHV*QLLKDGAQLNNCRL
Trigger: GAGTCGACAATTGTTGAGTTGGGCTCCATCTTTCAGCAGTTGGCACACATGGTTAAGGAACAGGAGGAAACCATTCAGAGGTGAGATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CAA 90 bp CTTCGACGCTCCCACCCAGAAATGATGACATGGCTAGTGAGGCTGACAGTCTTGTGTTTGTTGAGGCTATaGATGTCCTGTTTGATGATA +
Preference number: 5 (lower is better)
Translates to: LRRSHPEMMTWLVRLTVLCLLRL*MSCLMI
Trigger: TATCATCAAACAGGACATCAATAGCCTCAACAAACA...CAAGACTGTCAGCCTCACTAGCCATGTCATCATTTCTGGGTGGGAGCGTCGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294179.8
CDS-3UTR CAA 90 bp TTGGAGGTGACAGACTGGAAGTACTTGAGGATCTCTGAATGGGCGGCCTCAACGTGTTTGTTGAGGCTATaGATGTCCTGTTTGATGATA +
Preference number: 5 (lower is better)
Translates to: LEVTDWKYLRISEWAASTCLLRL*MSCLMI
Trigger: TATCATCAAACAGGACATCAATAGCCTCAACAAACA...CGTTGAGGCCGCCCATTCAGAGATCCTCAAGTACTTCCAGTCTGTCACCTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377897.8
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CTCTGCTCCCTTCCAGTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGCTGGAGCTGAGCAATTaGTTTGTTGAGGCTATTGAT +
Preference number: 5 (lower is better)
Translates to: LCSLPVTSQQSSNLEPCVLELSN*FVEAID
Trigger: ATCAATAGCCTCAACAAACAAATTGCTCAGCTCCAG...CACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGACTGGAAGGGAGCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp CACGCAAAGCTGGCTTATTTGTCTGGATTCCATTCTGGGCAACATAGTGAGACAAGGAAAGAGGATCCCTaGAGTCTAGGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: HAKLAYLSGFHSGQHSETRKEDP*SLGVQD
Trigger: GTCTTGAACTCCTAGACTCAAGGGATCCTCTTTCCT...TGTCTCACTATGTTGCCCAGAATGGAATCCAGACAAATAAGCCAGCTTTGCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486437.1
CDS-3UTR CAA 90 bp CTGGAGAGGGTTTATAAAAATCTCCTAGTGGAAACAACCTCCCCCACTGGCCCCTGTTTGTTGAGGCTATaGATGTCCTGTTTGATGATA +
Preference number: 5 (lower is better)
Translates to: LERVYKNLLVETTSPTGPCLLRL*MSCLMI
Trigger: TATCATCAAACAGGACATCAATAGCCTCAACAAACA...GGGGCCAGTGGGGGAGGTTGTTTCCACTAGGAGATTTTTATAAACCCTCTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp TGCTGCCAACGCTTCCTTTGGGAGAGGCTGGAGAGGGTTTATAAAAATCTCCTACTGGAGCTGAGCAATTaGTTTGTTGAGGCTATTGAT +
Preference number: 5 (lower is better)
Translates to: CCQRFLWERLERVYKNLLLELSN*FVEAID
Trigger: ATCAATAGCCTCAACAAACAAATTGCTCAGCTCCAG...TAGGAGATTTTTATAAACCCTCTCCAGCCTCTCCCAAAGGAAGCGTTGGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp GTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTTCATAGGCCTGAGAGCCCAACTCAACAATaGTCGACTCAATGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: VTSQQSSNLEPCVFHRPESPTQQ*STQCSA
Trigger: TGCAGAACATTGAGTCGACAATTGTTGAGTTGGGCT...CTCAGGCCTATGAAACACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS-3UTR CAA 90 bp AAGCAGCTCCAGACAGACTTTACTGTTCTACTTGCCACTGTATCTCCCGCACCTTGTTTGTTGAGGCTATaGATGTCCTGTTTGATGATA +
Preference number: 5 (lower is better)
Translates to: KQLQTDFTVLLATVSPAPCLLRL*MSCLMI
Trigger: TATCATCAAACAGGACATCAATAGCCTCAACAAACA...AGGTGCGGGAGATACAGTGGCAAGTAGAACAGTAAAGTCTGTCTGGAGCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431400.2
CDS-3UTR CAA 90 bp GTCACTTCACAGCAGAGTTCAAATCTAGAACCCTGTGTGTTTCATAGGCCTGAGCTGGAGCTGAGCAATTaGTTTGTTGAGGCTATTGAT +
Preference number: 5 (lower is better)
Translates to: VTSQQSSNLEPCVFHRPELELSN*FVEAID
Trigger: ATCAATAGCCTCAACAAACAAATTGCTCAGCTCCAG...CTCAGGCCTATGAAACACACAGGGTTCTAGATTTGAACTCTGCTGTGAAGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
ENST00000492066.5
CDS CCA 90 bp ATCATTATTCTGAATATAACTGAATTCACCCCAACAGTGAGAATGTaGGAGTCTAAATGTGGATCACGAATCTCAACCATCTGGTTTGGC +
Preference number: 5 (lower is better)
Translates to: IIILNITEFTPTVRM*ESKCGSRISTIWFG
Trigger: GCCAAACCAGATGGTTGAGATTCGTGATCCACATTTAGACTCCCACATTCTCACTGTTGGGGTGAATTCAGTTATATTCAGAATAATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677401.1
CDS CCA 72 bp CAGACAGAAACTCCTGGGTCCGATCCCGGCAGGACATaGTGTCGGGAGGGGGAGGGACGAGGGTCACTCCCC +
Preference number: 6 (lower is better)
Translates to: QTETPGSDPGRT*CREGEGRGSLP
Trigger: GGGGAGTGACCCTCGTCCCTCCCCCTCCCGACACCATGTCCTGCCGGGATCGGACCCAGGAGTTTCTGTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394690.5
ENST00000488303.5
CDS CCA 72 bp CGGGTCTGCAGCGACTTGCAGGCAGACAGAAACTCCTaGGTCCGATCCCGGCAGGACATGGTGTCGGGAGGG +
Preference number: 6 (lower is better)
Translates to: RVCSDLQADRNS*VRSRQDMVSGG
Trigger: CCCTCCCGACACCATGTCCTGCCGGGATCGGACCCAGGAGTTTCTGTCTGCCTGCAAGTCGCTGCAGACCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000486437.1
ENST00000488303.5
ENST00000491231.5
ENST00000492066.5
CDS GCA 72 bp ACCACTACACTCCAGCCTGACGGGTCTGCAGCGACTTaGAGGCAGACAGAAACTCCTGGGTCCGATCCCGGC +
Preference number: 6 (lower is better)
Translates to: TTTLQPDGSAAT*RQTETPGSDPG
Trigger: GCCGGGATCGGACCCAGGAGTTTCTGTCTGCCTGCAAGTCGCTGCAGACCCGTCAGGCTGGAGTGTAGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486437.1
ENST00000488303.5
CDS GCA 72 bp GTCTTTCCCAATGCGCCTGACGGGTCTGCAGCGACTTaGAGGCAGACAGAAACTCCTGGGTCCGATCCCGGC +
Preference number: 6 (lower is better)
Translates to: VFPNAPDGSAAT*RQTETPGSDPG
Trigger: GCCGGGATCGGACCCAGGAGTTTCTGTCTGCCTGCAAGTCGCTGCAGACCCGTCAGGCGCATTGGGAAAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
CDS CCA 72 bp CGTCCAGCTGGGCTCCTAGCACGTTCTCGTCGATCCTaGGGACAAGGCCGGGAGAAGAGGAAACAAAAGGAC +
Preference number: 6 (lower is better)
Translates to: RPAGLLARSRRS*GQGREKRKQKD
Trigger: GTCCTTTTGTTTCCTCTTCTCCCGGCCTTGTCCCCAGGATCGACGAGAACGTGCTAGGAGCCCAGCTGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377897.8
CDS CCA 72 bp TTGAGGATCTCTGAATGGGCGGCCTCAACGTCCAGCTaGGCTCCTAGCACGTTCTCGTCGATCCTGGGGACA +
Preference number: 6 (lower is better)
Translates to: LRISEWAASTSS*APSTFSSILGT
Trigger: TGTCCCCAGGATCGACGAGAACGTGCTAGGAGCCCAGCTGGACGTTGAGGCCGCCCATTCAGAGATCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377897.8
CDS GCA 72 bp TTGTCTGGATTCCATTCTGACGGGTCTGCAGCGACTTaGAGGCAGACAGAAACTCCTGGGTCCGATCCCGGC +
Preference number: 6 (lower is better)
Translates to: LSGFHSDGSAAT*RQTETPGSDPG
Trigger: GCCGGGATCGGACCCAGGAGTTTCTGTCTGCCTGCAAGTCGCTGCAGACCCGTCAGAATGGAATCCAGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
CDS CAA 72 bp CACTGCGTTGTCGGACAGCACGCAAAGCTGGCTTATTaGTCTGGATTCCATTCTGACGGGTCTGCAGCGACT +
Preference number: 6 (lower is better)
Translates to: HCVVGQHAKLAY*SGFHSDGSAAT
Trigger: AGTCGCTGCAGACCCGTCAGAATGGAATCCAGACAAATAAGCCAGCTTTGCGTGCTGTCCGACAACGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
CDS CAA 72 bp CCCAATGCGCTTGGCCATGAGGGTGAATTCACTGCGTaGTCGGACAGCACGCAAAGCTGGCTTATTTGTCTG +
Preference number: 6 (lower is better)
Translates to: PNALGHEGEFTA*SDSTQSWLICL
Trigger: CAGACAAATAAGCCAGCTTTGCGTGCTGTCCGACAACGCAGTGAATTCACCCTCATGGCCAAGCGCATTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000431400.2
ENST00000488303.5
ENST00000491231.5
CDS CAA 90 bp TTGCGCTTTGCCAAGATTGTCAGCTTCTCCAGCTTGGCAAATGTGTaGCTAAGGTCTTTCCCAATGCGCCTGACGGGTCTGCAGCGACTT +
Preference number: 6 (lower is better)
Translates to: LRFAKIVSFSSLANV*LRSFPMRLTGLQRL
Trigger: AAGTCGCTGCAGACCCGTCAGGCGCATTGGGAAAGACCTTAGCAACACATTTGCCAAGCTGGAGAAGCTGACAATCTTGGCAAAGCGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492066.5
CDS TCA 72 bp GCAGGCATGTTAAAGAGACTCCCACCATTGGCCCCATaGCCCTGTAGAACTTGTCCCTTCTTCATTTCCCTC +
Preference number: 6 (lower is better)
Translates to: AGMLKRLPPLAP*PCRTCPFFISL
Trigger: GAGGGAAATGAAGAAGGGACAAGTTCTACAGGGTCATGGGGCCAATGGTGGGAGTCTCTTTAACATGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677401.1
CDS CCA 72 bp GGTGAATTCACTGCGTTGTCGGACAGCACGCAAAGCTaGCTTATTTGTCTGGATTCCATTCTGACGGGTCTG +
Preference number: 6 (lower is better)
Translates to: GEFTALSDSTQS*LICLDSILTGL
Trigger: CAGACCCGTCAGAATGGAATCCAGACAAATAAGCCAGCTTTGCGTGCTGTCCGACAACGCAGTGAATTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000491231.5
CDS CAA 90 bp AAGGTCTTTCCCAATGCGCTTGGCCATGAGGGTGAATTCACTGCGTaGTCGGACAGCACGCAAAGCTGGCTTATTTGTCTGGATTCCATT +
Preference number: 6 (lower is better)
Translates to: KVFPNALGHEGEFTA*SDSTQSWLICLDSI
Trigger: AATGGAATCCAGACAAATAAGCCAGCTTTGCGTGCTGTCCGACAACGCAGTGAATTCACCCTCATGGCCAAGCGCATTGGGAAAGACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000431400.2
ENST00000488303.5
ENST00000491231.5
CDS CAA 72 bp GACTTGCGCTTTGCCAAGATTGTCAGCTTCTCCAGCTaGGCAAATGTGTTGCTAAGGTCTTTCCCAATGCGC +
Preference number: 6 (lower is better)
Translates to: DLRFAKIVSFSS*ANVLLRSFPMR
Trigger: GCGCATTGGGAAAGACCTTAGCAACACATTTGCCAAGCTGGAGAAGCTGACAATCTTGGCAAAGCGCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000431400.2
ENST00000488303.5
ENST00000491231.5
ENST00000492066.5
CDS CAA 90 bp TTGCGCTTTGCCAAGATTGTCAGCTTCTCCAGCTTGGCAAATGTGTaGCTAAGGTCTTTCCCAATGCGCTTGGCCATGAGGGTGAATTCA +
Preference number: 6 (lower is better)
Translates to: LRFAKIVSFSSLANV*LRSFPMRLAMRVNS
Trigger: TGAATTCACCCTCATGGCCAAGCGCATTGGGAAAGACCTTAGCAACACATTTGCCAAGCTGGAGAAGCTGACAATCTTGGCAAAGCGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294179.8
ENST00000377897.8
ENST00000394690.5
ENST00000431400.2
ENST00000488303.5
ENST00000491231.5
CDS CCA 72 bp GGTGAATTCACTGCGTTGTCGGACAGCACGCAAAGCTaGCTTATTTGTCTGGATTCCATTCTGGGCAACATA +
Preference number: 6 (lower is better)
Translates to: GEFTALSDSTQS*LICLDSILGNI
Trigger: TATGTTGCCCAGAATGGAATCCAGACAAATAAGCCAGCTTTGCGTGCTGTCCGACAACGCAGTGAATTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488303.5
CDS CAA 90 bp CCTACGCAGATTGTTCTCACCTCTGTCCTCACTTCTAAAACCGATTaGAAGTCATTGGACATAGAAGCCAGTTTCGACTGCAAGGAGACC +
Preference number: 6 (lower is better)
Translates to: PTQIVLTSVLTSKTD*KSLDIEASFDCKET
Trigger: GGTCTCCTTGCAGTCGAAACTGGCTTCTATGTCCAATGACTTCAAATCGGTTTTAGAAGTGAGGACAGAGGTGAGAACAATCTGCGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677401.1
CDS GCA 72 bp ACTCTGAATGGTTTCCTCCTGTTCCTTAACCATGTGTaGCAACTGCTGAAAGATGGAGCCCAACTCAACAAT +
Preference number: 6 (lower is better)
Translates to: TLNGFLLFLNHV*QLLKDGAQLNN
Trigger: ATTGTTGAGTTGGGCTCCATCTTTCAGCAGTTGGCACACATGGTTAAGGAACAGGAGGAAACCATTCAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377897.8
CDS CAA 72 bp ACCTCTGTCCTCACTTCTAAAACCGATTTGAAGTCATaGGACATAGAAGCCAGTTTCGACTGCAAGGAGACC +
Preference number: 6 (lower is better)
Translates to: TSVLTSKTDLKS*DIEASFDCKET
Trigger: GGTCTCCTTGCAGTCGAAACTGGCTTCTATGTCCAATGACTTCAAATCGGTTTTAGAAGTGAGGACAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677401.1
CDS CAA 90 bp ATTGTTCTCACCTCTGTCCTCACTTCTAAAACCGATTTGAAGTCATaGGACATAGAAGCCAGTTTCGACTGCAAGGAGACCACAATGGTG +
Preference number: 6 (lower is better)
Translates to: IVLTSVLTSKTDLKS*DIEASFDCKETTMV
Trigger: CACCATTGTGGTCTCCTTGCAGTCGAAACTGGCTTCTATGTCCAATGACTTCAAATCGGTTTTAGAAGTGAGGACAGAGGTGAGAACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677401.1
CDS CAA 72 bp ATTGTTCTCACCTCTGTCCTCACTTCTAAAACCGATTaGAAGTCATTGGACATAGAAGCCAGTTTCGACTGC +
Preference number: 6 (lower is better)
Translates to: IVLTSVLTSKTD*KSLDIEASFDC
Trigger: GCAGTCGAAACTGGCTTCTATGTCCAATGACTTCAAATCGGTTTTAGAAGTGAGGACAGAGGTGAGAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677401.1
CDS CCA 72 bp CTGAATATAACTGAATTCACCCCAACAGTGAGAATGTaGGAGTCTAAATGTGGATCACGAATCTCAACCATC +
Preference number: 6 (lower is better)
Translates to: LNITEFTPTVRM*ESKCGSRISTI
Trigger: GATGGTTGAGATTCGTGATCCACATTTAGACTCCCACATTCTCACTGTTGGGGTGAATTCAGTTATATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677401.1