RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STMN4 (Homo sapiens)

Ensembl gene IDs: ENSG00000015592

Ensembl transcript IDs: ENST00000265770.11, ENST00000350889.8, ENST00000519614.5, ENST00000519997.5, ENST00000522750.1, ENST00000522908.1, ENST00000523048.5

Found 484 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCCAGTGCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTaGAGCTGCTGGAGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCC +
Preference number: 1 (lower is better)
Translates to: PQCWERSRRARLPGT*SCWSCPADLESSLA
Trigger: GGCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGCACTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR GCA 90 bp TGCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTaGTGGAGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCCTCTAGG +
Preference number: 1 (lower is better)
Translates to: CWERSRRARLPGTWS*WSCPADLESSLASR
Trigger: CCTAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR GCA 90 bp CTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTaGCCCACCCAGGACTCTGTCCTTCACCCTGAAGTTCTACCGCCC +
Preference number: 1 (lower is better)
Translates to: LTTPLAGFSGAPCSR*PTQDSVLHPEVLPP
Trigger: GGGCGGTAGAACTTCAGGGTGAAGGACAGAGTCCTGGGTGGGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR CCA 90 bp CTGCAGGGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTaGGTTCTCTGGTGCGCCCTGCAGCCGCTGCCCCACCCAGGACTC +
Preference number: 1 (lower is better)
Translates to: LQGGSNTTGTHNPSG*VLWCALQPLPHPGL
Trigger: GAGTCCTGGGTGGGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR CCA 90 bp TGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTGCTaGAGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCCTCTAGGCTT +
Preference number: 1 (lower is better)
Translates to: WERSRRARLPGTWSC*SCPADLESSLASRL
Trigger: AAGCCTAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
3UTR CCA 90 bp CACACAGACCTCATCCCACCTGCTGCAGGGTGGAAGCAACACCACTaGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCA +
Preference number: 1 (lower is better)
Translates to: HTDLIPPAAGWKQHH*YSQPLWLGSLVRPA
Trigger: TGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCTGCAGCAGGTGGGATGAGGTCTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR CCA 90 bp TGCCCCACCCAGGACTCTGTCCTTCACCCTGAAGTTCTACCGCCCTaGTTTTCATCTCTCCTCAACATGGTGCCTGGAGGCTCAATGTCC +
Preference number: 1 (lower is better)
Translates to: CPTQDSVLHPEVLPP*FSSLLNMVPGGSMS
Trigger: GGACATTGAGCCTCCAGGCACCATGTTGAGGAGAGATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAGTCCTGGGTGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR CCA 90 bp GATGGTTCACACACACACACAGACCTCATCCCACCTGCTGCAGGGTaGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCT +
Preference number: 1 (lower is better)
Translates to: DGSHTHTDLIPPAAG*KQHHWYSQPLWLGS
Trigger: AGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCTGCAGCAGGTGGGATGAGGTCTGTGTGTGTGTGTGAACCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR CCA 90 bp GCTGTCCGGCTGACCTGGAAAGTTCTTTGGCCTCTAGGCTTTACCTaGAGGCCTCTTCCTTCAGCTCCTTGTTTTTCCGCACCTCCTCGG +
Preference number: 1 (lower is better)
Translates to: AVRLTWKVLWPLGFT*RPLPSAPCFSAPPR
Trigger: CCGAGGAGGTGCGGAAAAACAAGGAGCTGAAGGAAGAGGCCTCCAGGTAAAGCCTAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
3UTR CCA 90 bp GGAAGGGAGGAGGAGAGCTTCTTTTCCAGCCATGGTTCAGTGTCCTaGAGACCAAGACTGCTGGGTCTGGATGCCTCCTTTGCCTTCTAC +
Preference number: 1 (lower is better)
Translates to: GREEESFFSSHGSVS*RPRLLGLDASFAFY
Trigger: GTAGAAGGCAAAGGAGGCATCCAGACCCAGCAGTCTTGGTCTCCAGGACACTGAACCATGGCTGGAAAAGAAGCTCTCCTCCTCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR CCA 90 bp TCATGTTTGCAGGGGAAGGGAGGAGGAGAGCTTCTTTTCCAGCCATaGTTCAGTGTCCTGGAGACCAAGACTGCTGGGTCTGGATGCCTC +
Preference number: 1 (lower is better)
Translates to: SCLQGKGGGELLFQP*FSVLETKTAGSGCL
Trigger: GAGGCATCCAGACCCAGCAGTCTTGGTCTCCAGGACACTGAACCATGGCTGGAAAAGAAGCTCTCCTCCTCCCTTCCCCTGCAAACATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR TCA 90 bp GAAATGAGGCCAGCGTGTTCTCAGCAGAACGGGCCGGTATTCTGCTaGCACACAGAACCAACCCCGGCCTCATGTTTCTCATATTTAGGT +
Preference number: 1 (lower is better)
Translates to: EMRPACSQQNGPVFC*HTEPTPASCFSYLG
Trigger: ACCTAAATATGAGAAACATGAGGCCGGGGTTGGTTCTGTGTGTCAGCAGAATACCGGCCCGTTCTGCTGAGAACACGCTGGCCTCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519614.5
3UTR GCA 90 bp CAGCCATGGTTCAGTGTCCTGGAGACCAAGACTGCTGGGTCTGGATaGCTCCTTTGCCTTCTACTAGCAAACACTTTATTTCCTTGCTCG +
Preference number: 1 (lower is better)
Translates to: QPWFSVLETKTAGSG*LLCLLLANTLFPCS
Trigger: CGAGCAAGGAAATAAAGTGTTTGCTAGTAGAAGGCAAAGGAGGCATCCAGACCCAGCAGTCTTGGTCTCCAGGACACTGAACCATGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR GCA 90 bp AGAGCTTCTTTTCCAGCCATGGTTCAGTGTCCTGGAGACCAAGACTaGTGGGTCTGGATGCCTCCTTTGCCTTCTACTAGCAAACACTTT +
Preference number: 1 (lower is better)
Translates to: RASFPAMVQCPGDQD*WVWMPPLPSTSKHF
Trigger: AAAGTGTTTGCTAGTAGAAGGCAAAGGAGGCATCCAGACCCAGCAGTCTTGGTCTCCAGGACACTGAACCATGGCTGGAAAAGAAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR GCA 90 bp ACCCTGAAGTTCTACCGCCCTGGTTTTCATCTCTCCTCAACATGGTaGCTGGAGGCTCAATGTCCAGGTAGAGATGTGAAAATCAGATCT +
Preference number: 1 (lower is better)
Translates to: TLKFYRPGFHLSSTW*LEAQCPGRDVKIRS
Trigger: AGATCTGATTTTCACATCTCTACCTGGACATTGAGCCTCCAGGCACCATGTTGAGGAGAGATGAAAACCAGGGCGGTAGAACTTCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR CCA 90 bp TTCACCCTGAAGTTCTACCGCCCTGGTTTTCATCTCTCCTCAACATaGTGCCTGGAGGCTCAATGTCCAGGTAGAGATGTGAAAATCAGA +
Preference number: 1 (lower is better)
Translates to: FTLKFYRPGFHLSST*CLEAQCPGRDVKIR
Trigger: TCTGATTTTCACATCTCTACCTGGACATTGAGCCTCCAGGCACCATGTTGAGGAGAGATGAAAACCAGGGCGGTAGAACTTCAGGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR CCA 90 bp TTTCCAGCCATGGTTCAGTGTCCTGGAGACCAAGACTGCTGGGTCTaGATGCCTCCTTTGCCTTCTACTAGCAAACACTTTATTTCCTTG +
Preference number: 1 (lower is better)
Translates to: FPAMVQCPGDQDCWV*MPPLPSTSKHFISL
Trigger: CAAGGAAATAAAGTGTTTGCTAGTAGAAGGCAAAGGAGGCATCCAGACCCAGCAGTCTTGGTCTCCAGGACACTGAACCATGGCTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR CCA 90 bp GCTTCTTTTCCAGCCATGGTTCAGTGTCCTGGAGACCAAGACTGCTaGGTCTGGATGCCTCCTTTGCCTTCTACTAGCAAACACTTTATT +
Preference number: 1 (lower is better)
Translates to: ASFPAMVQCPGDQDC*VWMPPLPSTSKHFI
Trigger: AATAAAGTGTTTGCTAGTAGAAGGCAAAGGAGGCATCCAGACCCAGCAGTCTTGGTCTCCAGGACACTGAACCATGGCTGGAAAAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR GCA 90 bp ACTCACTGGGTCTGTGTCAAGAGGTTTAGAGAGAATCATGTTTCCTaGTCAGTGGGAATCTCAGCTCATCATACCCGTGACTTAGAGCCA +
Preference number: 1 (lower is better)
Translates to: THWVCVKRFRENHVS*SVGISAHHTRDLEP
Trigger: TGGCTCTAAGTCACGGGTATGATGAGCTGAGATTCCCACTGAGCAGGAAACATGATTCTCTCTAAACCTCTTGACACAGACCCAGTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519614.5
3UTR TCA 90 bp CTAGAATCTCAAACCCCCAAAGCATGGAGGACTTCTGCTATGGTGTaGATGTTGCTGTCTCCCCCAATATACAGGTTGAATCCTAATCCC +
Preference number: 1 (lower is better)
Translates to: LESQTPKAWRTSAMV*MLLSPPIYRLNPNP
Trigger: GGGATTAGGATTCAACCTGTATATTGGGGGAGACAGCAACATTCACACCATAGCAGAAGTCCTCCATGCTTTGGGGGTTTGAGATTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR TCA 90 bp GAATCATGTTTCCTGCTCAGTGGGAATCTCAGCTCATCATACCCGTaGCTTAGAGCCAAGAGCTCAAGAAAGCATCTTTCCTTCCATCAA +
Preference number: 1 (lower is better)
Translates to: ESCFLLSGNLSSSYP*LRAKSSRKHLSFHQ
Trigger: TTGATGGAAGGAAAGATGCTTTCTTGAGCTCTTGGCTCTAAGTCACGGGTATGATGAGCTGAGATTCCCACTGAGCAGGAAACATGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519614.5
3UTR GCA 90 bp TTCAGTGTCCTGGAGACCAAGACTGCTGGGTCTGGATGCCTCCTTTaGCTTCTACTAGCAAACACTTTATTTCCTTGCTCGTATTTTCTA +
Preference number: 1 (lower is better)
Translates to: FSVLETKTAGSGCLL*LLLANTLFPCSYFL
Trigger: TAGAAAATACGAGCAAGGAAATAAAGTGTTTGCTAGTAGAAGGCAAAGGAGGCATCCAGACCCAGCAGTCTTGGTCTCCAGGACACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR GCA 90 bp TCTAATCTACCTAGAATCTCAAACCCCCAAAGCATGGAGGACTTCTaGTATGGTGTGAATGTTGCTGTCTCCCCCAATATACAGGTTGAA +
Preference number: 1 (lower is better)
Translates to: SNLPRISNPQSMEDF*YGVNVAVSPNIQVE
Trigger: TTCAACCTGTATATTGGGGGAGACAGCAACATTCACACCATAGCAGAAGTCCTCCATGCTTTGGGGGTTTGAGATTCTAGGTAGATTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR TCA 90 bp AATGGCAGAATTAAGGAAGCAAAGGGGCATCTGCCATCAGATGGATaGAAGCCAGGTTTCGAGAACTTTTTAACAATTACCCAAAGGACA +
Preference number: 1 (lower is better)
Translates to: NGRIKEAKGHLPSDG*KPGFENFLTITQRT
Trigger: TGTCCTTTGGGTAATTGTTAAAAAGTTCTCGAAACCTGGCTTTCATCCATCTGATGGCAGATGCCCCTTTGCTTCCTTAATTCTGCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
3UTR GCA 90 bp TCTGGATGCCTCCTTTGCCTTCTACTAGCAAACACTTTATTTCCTTaGTCGTATTTTCTAATCTACCTAGAATCTCAAACCCCCAAAGCA +
Preference number: 1 (lower is better)
Translates to: SGCLLCLLLANTLFP*SYFLIYLESQTPKA
Trigger: TGCTTTGGGGGTTTGAGATTCTAGGTAGATTAGAAAATACGAGCAAGGAAATAAAGTGTTTGCTAGTAGAAGGCAAAGGAGGCATCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR CCA 90 bp CATTTATTGACAAAAGGCAACATATTGGAAAGACCTGTGACTCACTaGGTCTGTGTCAAGAGGTTTAGAGAGAATCATGTTTCCTGCTCA +
Preference number: 1 (lower is better)
Translates to: HLLTKGNILERPVTH*VCVKRFRENHVSCS
Trigger: TGAGCAGGAAACATGATTCTCTCTAAACCTCTTGACACAGACCCAGTGAGTCACAGGTCTTTCCAATATGTTGCCTTTTGTCAATAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519614.5
3UTR TCA 90 bp TTCTGTTATCAATTACTTAGTCTAAGGTATTTTGTTACAGCAGTCTaGACGGTTGTGACTAAGACAAATTCCTTCTTACAGTGCATCTTG +
Preference number: 1 (lower is better)
Translates to: FCYQLLSLRYFVTAV*TVVTKTNSFLQCIL
Trigger: CAAGATGCACTGTAAGAAGGAATTTGTCTTAGTCACAACCGTTCAGACTGCTGTAACAAAATACCTTAGACTAAGTAATTGATAACAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR GCA 90 bp TGCAGGGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGCGCCCTGCAGCCGCTaGCCCACCCAGGACTCTGTC +
Preference number: 2 (lower is better)
Translates to: CRVEATPLVLTTPLAGFSAPCSR*PTQDSV
Trigger: GACAGAGTCCTGGGTGGGGCAGCGGCTGCAGGGCGC...AGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR CCA 90 bp GCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGGCTGCCTGGAACGTaGAGCTGCTGGAGCTGTCCG +
Preference number: 2 (lower is better)
Translates to: ATPLVLTTPLAGFSGAPCRLPGT*SCWSCP
Trigger: CGGACAGCTCCAGCAGCTCCACGTTCCAGGCAGCCT...GCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR GCA 90 bp CACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTGCCCCACCCATGTGAAAATCAGATCTaGGCCGGGCAGGGTTGCAAT +
Preference number: 2 (lower is better)
Translates to: HNPSGWVLWCALQPLPHPCENQI*AGQGCN
Trigger: ATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACA...TGGGTGGGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR GCA 90 bp GGAGAGCTTCTTTTCCAGCCATGGTTCAGTGTCCTGGAGACCAAGACTGCTGGGGGCTGGGTTCTCTGGTaGGCCCTGCAGCCGCTGCCC +
Preference number: 2 (lower is better)
Translates to: GELLFQPWFSVLETKTAGGWVLW*ALQPLP
Trigger: GGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCC...CCCAGCAGTCTTGGTCTCCAGGACACTGAACCATGGCTGGAAAAGAAGCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR-3UTR CCA 90 bp CACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTCCACCTGCTGCAGGGTaGAAGCAACACCACTGGTAC +
Preference number: 2 (lower is better)
Translates to: HWYSQPLWLGSLVRPAAAPPAAG*KQHHWY
Trigger: GTACCAGTGGTGTTGCTTCCACCCTGCAGCAGGTGG...AGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR CCA 90 bp GGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCAGGCTGCCTGGAACGTaGAGCTGCTGGAGCTGTCCG +
Preference number: 2 (lower is better)
Translates to: GGSNTTGTHNPSGWVLWCRLPGT*SCWSCP
Trigger: CGGACAGCTCCAGCAGCTCCACGTTCCAGGCAGCCT...GCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR CCA 90 bp ATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTCCGCGGGCGAGGCTGCCTaGAACGTGGAGCTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: ICAGQGCNVLEFFSISLSAGEAA*NVELLE
Trigger: CTCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGC...GGAAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR-3UTR CCA 90 bp TTCAATTATGCCAAAGGCTGGCCTGATTCAACCCACCTCACCCAGGCTCCAGATCCCAAACCCCAGTGCTaGGAGCGCAGCCGGCGGGCG +
Preference number: 2 (lower is better)
Translates to: FNYAKGWPDSTHLTQAPDPKPQC*ERSRRA
Trigger: CGCCCGCCGGCTGCGCTCCCAGCACTGGGGTTTGGG...ATCTGGAGCCTGGGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR GCA 90 bp ACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTCTCCTCAACATGGTaGCTGGAGGCTCAATGTCCA +
Preference number: 2 (lower is better)
Translates to: TTGTHNPSGWVLWCALQPLSSTW*LEAQCP
Trigger: TGGACATTGAGCCTCCAGGCACCATGTTGAGGAGAG...CGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR CCA 90 bp GGAGCTGCTGGAGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCCTCTAGGCTTTAGGCTGCCTGGAACGTaGAGCTGCTGGAGCTGTCCG +
Preference number: 2 (lower is better)
Translates to: GAAGAVRLTWKVLWPLGFRLPGT*SCWSCP
Trigger: CGGACAGCTCCAGCAGCTCCACGTTCCAGGCAGCCT...AAAGCCTAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
3UTR-3UTR CCA 90 bp CAGGACTCTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATCTCTCCTCGCGGGCGAGGCTGCCTaGAACGTGGAGCTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: QDSVLHPEVLPPWFSSLLAGEAA*NVELLE
Trigger: CTCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGC...GAGGAGAGATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR CCA 90 bp TGCAGGGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTCGGCGTGCTTGTCCATaGGACGAGGCCACCGATCAG +
Preference number: 2 (lower is better)
Translates to: CRVEATPLVLTTPLAGFSRRACP*DEATDQ
Trigger: CTGATCGGTGGCCTCGTCCCATGGACAAGCACGCCG...AGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519997.5
3UTR-3UTR TCA 90 bp GGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCCTGGAGCTGTCCGGCTaGCCTGGAAAGTTCTTTGGC +
Preference number: 2 (lower is better)
Translates to: GGSNTTGTHNPSGWVLWCLELSG*PGKFFG
Trigger: GCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAG...GCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR GCA 90 bp CCCAGGACTCTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATCTCTCCCCTGGAACGTGGAGCTaGTGGAGCTGTCCGGCTGAC +
Preference number: 2 (lower is better)
Translates to: PRTLSFTLKFYRPGFHLSPGTWS*WSCPAD
Trigger: GTCAGCCGGACAGCTCCAGCAGCTCCACGTTCCAGG...GGAGAGATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAGTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR GCA 90 bp AAACCTTTCAATTATGCCAAAGGCTGGCCTGATTCAACCCACCTCACCCAGGCTGCGCCCTGCAGCCGCTaGCCCACCCAGGACTCTGTC +
Preference number: 2 (lower is better)
Translates to: KPFNYAKGWPDSTHLTQAAPCSR*PTQDSV
Trigger: GACAGAGTCCTGGGTGGGGCAGCGGCTGCAGGGCGC...AGCCTGGGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATTGAAAGGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR GCA 90 bp CCTTTCAATTATGCCAAAGGCTGGCCTGATTCAACCCACCTCACCCAGGCTCCACGCACCTCCTCGGCGTaGTTGTCCATGGGACGAGGC +
Preference number: 2 (lower is better)
Translates to: PFNYAKGWPDSTHLTQAPRTSSA*LSMGRG
Trigger: GCCTCGTCCCATGGACAAGCACGCCGAGGAGGTGCG...TGGAGCCTGGGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATTGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519997.5
3UTR-3UTR CCA 90 bp GCTTCTTTTCCAGCCATGGTTCAGTGTCCTGGAGACCAAGACTGCTGGGTCTGGAGGCTGCCTGGAACGTaGAGCTGCTGGAGCTGTCCG +
Preference number: 2 (lower is better)
Translates to: ASFPAMVQCPGDQDCWVWRLPGT*SCWSCP
Trigger: CGGACAGCTCCAGCAGCTCCACGTTCCAGGCAGCCT...CCAGACCCAGCAGTCTTGGTCTCCAGGACACTGAACCATGGCTGGAAAAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR-3UTR CCA 90 bp GAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCGCGGGCGAGGCTGCCTaGAACGTGGAGCTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: ENQICAGQGCNVLEFFSIAGEAA*NVELLE
Trigger: CTCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGC...GATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR-3UTR CCA 90 bp GCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCCCTCAACATGGTGCCTaGAGGCTCAATGTCCAGGTA +
Preference number: 2 (lower is better)
Translates to: ATPLVLTTPLAGFSGAPCPQHGA*RLNVQV
Trigger: TACCTGGACATTGAGCCTCCAGGCACCATGTTGAGG...GCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR TCA 90 bp TGCAGGGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTCTGGAGCTGTCCGGCTaGCCTGGAAAGTTCTTTGGC +
Preference number: 2 (lower is better)
Translates to: CRVEATPLVLTTPLAGFSLELSG*PGKFFG
Trigger: GCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAG...AGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR GCA 90 bp GAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCCTCTCCTCAACATGGTaGCTGGAGGCTCAATGTCCA +
Preference number: 2 (lower is better)
Translates to: EATPLVLTTPLAGFSGAPLSSTW*LEAQCP
Trigger: TGGACATTGAGCCTCCAGGCACCATGTTGAGGAGAG...GGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR CCA 90 bp CCCACCTGCTGCAGGGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGCTGTCCGGCTGACCTaGAAAGTTCTTTGGCCTCTA +
Preference number: 2 (lower is better)
Translates to: PTCCRVEATPLVLTTPLAAVRLT*KVLWPL
Trigger: TAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGC...AGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCTGCAGCAGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR CCA 90 bp AAACCTTTCAATTATGCCAAAGGCTGGCCTGATTCAACCCACCTCACCCAGGCTGCGGGCGAGGCTGCCTaGAACGTGGAGCTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: KPFNYAKGWPDSTHLTQAAGEAA*NVELLE
Trigger: CTCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGC...AGCCTGGGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATTGAAAGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR CCA 90 bp CACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTGAAGTTCTACCGCCCTaGTTTTCATCTCTCCTCAAC +
Preference number: 2 (lower is better)
Translates to: HWYSQPLWLGSLVRPAAAEVLPP*FSSLLN
Trigger: GTTGAGGAGAGATGAAAACCAGGGCGGTAGAACTTC...AGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR TCA 90 bp AGGGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTCTCTGTCCTTCACCCTaGAGTTCTACCGCCCTGGTT +
Preference number: 2 (lower is better)
Translates to: RVEATPLVLTTPLAGFSGLCPSP*SSTALV
Trigger: AACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAG...ACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR CCA 90 bp CCCACCTGCTGCAGGGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTCATCTCTCCTCAACATaGTGCCTGGAGGCTCAATGT +
Preference number: 2 (lower is better)
Translates to: PTCCRVEATPLVLTTPLAHLSST*CLEAQC
Trigger: ACATTGAGCCTCCAGGCACCATGTTGAGGAGAGATG...AGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCTGCAGCAGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR TCA 90 bp AATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTGGAGCTGTCCGGCTaGCCTGGAAAGTTCTTTGGC +
Preference number: 2 (lower is better)
Translates to: NQICAGQGCNVLEFFSISLELSG*PGKFFG
Trigger: GCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAG...GGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR-3UTR TCA 90 bp GCTTCTTTTCCAGCCATGGTTCAGTGTCCTGGAGACCAAGACTGCTGGGTCTGGGCCCTCACCAGACACTaGATCTGCTGGCACCTTGAT +
Preference number: 2 (lower is better)
Translates to: ASFPAMVQCPGDQDCWVWALTRH*ICWHLD
Trigger: ATCAAGGTGCCAGCAGATTCAGTGTCTGGTGAGGGC...CCAGACCCAGCAGTCTTGGTCTCCAGGACACTGAACCATGGCTGGAAAAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR-3UTR TCA 90 bp TTCTCAGCAGAACGGGCCGGTATTCTGCTGACACACAGAACCAACCCCGGCCTCAGCTCATCATACCCGTaGCTTAGAGCCAAGAGCTCA +
Preference number: 2 (lower is better)
Translates to: FSAERAGILLTHRTNPGLSSSYP*LRAKSS
Trigger: TGAGCTCTTGGCTCTAAGTCACGGGTATGATGAGCT...GAGGCCGGGGTTGGTTCTGTGTGTCAGCAGAATACCGGCCCGTTCTGCTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519614.5
3UTR-3UTR GCA 90 bp AGAGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTCCTGGAACGTGGAGCTaGTGGAGCTGTCCGGCTGAC +
Preference number: 2 (lower is better)
Translates to: RDVKIRSAPGRVAMSLSSPGTWS*WSCPAD
Trigger: GTCAGCCGGACAGCTCCAGCAGCTCCACGTTCCAGG...AGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR-3UTR GCA 90 bp GGCTCCAGATGCTTGAATGGCAGAATTAAGGAAGCAAAGGGGCATCTGCCATCACCTGGAACGTGGAGCTaGTGGAGCTGTCCGGCTGAC +
Preference number: 2 (lower is better)
Translates to: GSRCLNGRIKEAKGHLPSPGTWS*WSCPAD
Trigger: GTCAGCCGGACAGCTCCAGCAGCTCCACGTTCCAGG...TGATGGCAGATGCCCCTTTGCTTCCTTAATTCTGCCATTCAAGCATCTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR GCA 90 bp GGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCCGCCGGCGGGCGAGGCTaGCTGGAACGTGGAGCTGCT +
Preference number: 2 (lower is better)
Translates to: GFTGQFLTCTNTKSRGNAAGGRG*LERGAA
Trigger: AGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGC...GGCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR-3UTR GCA 90 bp CCCACCCAGGACTCTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATCTTGCGCCGGGCAGGGTTaGAATGTCCTTGAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: PTQDSVLHPEVLPPWFSSCAGQG*NVLEFF
Trigger: GAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCA...AGATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAGTCCTGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR CCA 90 bp GCCCCACCCAGGACTCTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATGCTGTCCGGCTGACCTaGAAAGTTCTTTGGCCTCTA +
Preference number: 2 (lower is better)
Translates to: APPRTLSFTLKFYRPGFHAVRLT*KVLWPL
Trigger: TAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGC...ATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAGTCCTGGGTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR GCA 90 bp GTTCTACCGCCCTGGTTTTCATCTCTCCTCAACATGGTGCCTGGAGGCTCAATGTGCGCCGGGCAGGGTTaGAATGTCCTTGAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: VLPPWFSSLLNMVPGGSMCAGQG*NVLEFF
Trigger: GAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCA...CATTGAGCCTCCAGGCACCATGTTGAGGAGAGATGAAAACCAGGGCGGTAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR-3UTR CCA 90 bp ACCGCCCTGGTTTTCATCTCTCCTCAACATGGTGCCTGGAGGCTCAATGTCCAGGCTGTCCGGCTGACCTaGAAAGTTCTTTGGCCTCTA +
Preference number: 2 (lower is better)
Translates to: TALVFISPQHGAWRLNVQAVRLT*KVLWPL
Trigger: TAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGC...CTGGACATTGAGCCTCCAGGCACCATGTTGAGGAGAGATGAAAACCAGGGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR-3UTR CCA 90 bp ACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCGGAAACAAATAGGATaGCTTCACTGGTCAATTCTT +
Preference number: 2 (lower is better)
Translates to: TTGTHNPSGWVLWCALQPRKQIG*LHWSIL
Trigger: AAGAATTGACCAGTGAAGCCATCCTATTTGTTTCCG...CGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR TCA 90 bp AGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCCTGGAGCTGTCCGGCTaGCCTGGAAAGTTCTTTGGC +
Preference number: 2 (lower is better)
Translates to: RCENQICAGQGCNVLEFFLELSG*PGKFFG
Trigger: GCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAG...GAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR-3UTR TCA 90 bp AGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTGTCCAGGTAGAGATGTaGAAATCAGATCTGCGCCGG +
Preference number: 2 (lower is better)
Translates to: RSAPGRVAMSLSSSPSPFVQVEM*KSDLRR
Trigger: CCGGCGCAGATCTGATTTTCACATCTCTACCTGGAC...AAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR-3UTR TCA 90 bp AGCAGAGTGGGAAGAGGTCCTGGGACCCGGTTAACACAGGCAGCCCCTGCACTCCAGCCTCCAAAACTGTaGGCAATCAATTTCTGTTAT +
Preference number: 2 (lower is better)
Translates to: SRVGRGPGTRLTQAAPALQPPKL*AINFCY
Trigger: ATAACAGAAATTGATTGCTCACAGTTTTGGAGGCTG...GAGTGCAGGGGCTGCCTGTGTTAACCGGGTCCCAGGACCTCTTCCCACTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR-3UTR CCA 90 bp AATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCGCTGTCCGGCTGACCTaGAAAGTTCTTTGGCCTCTA +
Preference number: 2 (lower is better)
Translates to: NQICAGQGCNVLEFFSISAVRLT*KVLWPL
Trigger: TAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGC...GGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR-3UTR CCA 90 bp CCTTTCAATTATGCCAAAGGCTGGCCTGATTCAACCCACCTCACCCAGGCTCCACCTCAACATGGTGCCTaGAGGCTCAATGTCCAGGTA +
Preference number: 2 (lower is better)
Translates to: PFNYAKGWPDSTHLTQAPPQHGA*RLNVQV
Trigger: TACCTGGACATTGAGCCTCCAGGCACCATGTTGAGG...TGGAGCCTGGGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATTGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR GCA 90 bp CTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCCCCCCTGGAACGTGGAGCTaGTGGAGCTGTCCGGCTGAC +
Preference number: 2 (lower is better)
Translates to: LHWSILNMYKHQKQRKRPPGTWS*WSCPAD
Trigger: GTCAGCCGGACAGCTCCAGCAGCTCCACGTTCCAGG...GGGGCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR-3UTR GCA 90 bp TGGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCCGCACCTCCTCGGCGTaGTTGTCCATGGGACGAGGC +
Preference number: 2 (lower is better)
Translates to: WLHWSILNMYKHQKQRKRRTSSA*LSMGRG
Trigger: GCCTCGTCCCATGGACAAGCACGCCGAGGAGGTGCG...GCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
3UTR-3UTR CCA 90 bp GCTGGCCTGATTCAACCCACCTCACCCAGGCTCCAGATGCTTGAATGGCAGAATGAAGTTCTACCGCCCTaGTTTTCATCTCTCCTCAAC +
Preference number: 2 (lower is better)
Translates to: AGLIQPTSPRLQMLEWQNEVLPP*FSSLLN
Trigger: GTTGAGGAGAGATGAAAACCAGGGCGGTAGAACTTC...ATTCTGCCATTCAAGCATCTGGAGCCTGGGTGAGGTGGGTTGAATCAGGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR CCA 90 bp ATAGGATGGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGGGAACGTGGAGCTGCTaGAGCTGTCCGGCTGACCTG +
Preference number: 2 (lower is better)
Translates to: IGWLHWSILNMYKHQKQRGTWSC*SCPADL
Trigger: CAGGTCAGCCGGACAGCTCCAGCAGCTCCACGTTCC...CCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCATCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR CAA 90 bp GAAGCAGATGGCAAGCCCTCACCAGACACTGAATCTGCTGGCACCTaGATATTGGACTTCCCAGCCTCCAAAACTGTGAGCAATCAATTT +
Preference number: 2 (lower is better)
Translates to: EADGKPSPDTESAGT*ILDFPASKTVSNQF
Trigger: AAATTGATTGCTCACAGTTTTGGAGGCTGGGAAGTCCAATATCAAGGTGCCAGCAGATTCAGTGTCTGGTGAGGGCTTGCCATCTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR-3UTR CCA 90 bp GGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCCCCTCTAGGCTTTACCTaGAGGCCTCTTCCTTCAGCT +
Preference number: 2 (lower is better)
Translates to: GFTGQFLTCTNTKSRGNAPLGFT*RPLPSA
Trigger: AGCTGAAGGAAGAGGCCTCCAGGTAAAGCCTAGAGG...GGCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
3UTR-3UTR CCA 90 bp AGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTATAGGATGGCTTCACTaGTCAATTCTTAACATGTAC +
Preference number: 2 (lower is better)
Translates to: RSAPGRVAMSLSSSPSPFIGWLH*SILNMY
Trigger: GTACATGTTAAGAATTGACCAGTGAAGCCATCCTAT...AAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR-3UTR CCA 90 bp TTCAATTATGCCAAAGGCTGGCCTGATTCAACCCACCTCACCCAGGCTCCAGATCGGAAACAAATAGGATaGCTTCACTGGTCAATTCTT +
Preference number: 2 (lower is better)
Translates to: FNYAKGWPDSTHLTQAPDRKQIG*LHWSIL
Trigger: AAGAATTGACCAGTGAAGCCATCCTATTTGTTTCCG...ATCTGGAGCCTGGGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR GCA 90 bp TGGGTCTGTGTCAAGAGGTTTAGAGAGAATCATGTTTCCTGCTCAGTGGGAATCCTAGGAATGCATACCTaGTTGTCTATCTCTACTCCT +
Preference number: 2 (lower is better)
Translates to: WVCVKRFRENHVSCSVGILGMHT*LSISTP
Trigger: AGGAGTAGAGATAGACAAGCAGGTATGCATTCCTAG...GATTCCCACTGAGCAGGAAACATGATTCTCTCTAAACCTCTTGACACAGACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519614.5
3UTR-3UTR CCA 90 bp TGCATCTTGGGGACCATATTAGGATGTCAGTTCATTGAAAGGAAGATTGAGTTTCATCTCTCCTCAACATaGTGCCTGGAGGCTCAATGT +
Preference number: 2 (lower is better)
Translates to: CILGTILGCQFIERKIEFHLSST*CLEAQC
Trigger: ACATTGAGCCTCCAGGCACCATGTTGAGGAGAGATG...AAACTCAATCTTCCTTTCAATGAACTGACATCCTAATATGGTCCCCAAGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR TCA 90 bp CCTCCTTTGCCTTCTACTAGCAAACACTTTATTTCCTTGCTCGTATTTTCTAATCTGCCATCAGATGGATaGAAGCCAGGTTTCGAGAAC +
Preference number: 2 (lower is better)
Translates to: PPLPSTSKHFISLLVFSNLPSDG*KPGFEN
Trigger: GTTCTCGAAACCTGGCTTTCATCCATCTGATGGCAG...ATTAGAAAATACGAGCAAGGAAATAAAGTGTTTGCTAGTAGAAGGCAAAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR-3UTR GCA 90 bp TGCATCTTGGGGACCATATTAGGATGTCAGTTCATTGAAAGGAAGATTGAGTTTCACCCAGGCTCCAGATaGTTGAATGGCAGAATTAAG +
Preference number: 2 (lower is better)
Translates to: CILGTILGCQFIERKIEFHPGSR*LNGRIK
Trigger: CTTAATTCTGCCATTCAAGCATCTGGAGCCTGGGTG...AAACTCAATCTTCCTTTCAATGAACTGACATCCTAATATGGTCCCCAAGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR CCA 90 bp TCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCCCCTTGGCCACCATAGGATGGCTTCACTaGTCAATTCTTAACATGTAC +
Preference number: 2 (lower is better)
Translates to: SILNMYKHQKQRKRPLATIGWLH*SILNMY
Trigger: GTACATGTTAAGAATTGACCAGTGAAGCCATCCTAT...GGTGGCCAAGGGGCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR-3UTR CCA 90 bp GGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCCCGGAAACAAATAGGATaGCTTCACTGGTCAATTCTT +
Preference number: 2 (lower is better)
Translates to: GFTGQFLTCTNTKSRGNARKQIG*LHWSIL
Trigger: AAGAATTGACCAGTGAAGCCATCCTATTTGTTTCCG...GGCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR GCA 72 bp AACCCCAGTGCTGGGAGCGCAGCCGGCGGGCGAGGCTaGCTGGAACGTGGAGCTGCTGGAGCTGTCCGGCTG +
Preference number: 3 (lower is better)
Translates to: NPSAGSAAGGRG*LERGAAGAVRL
Trigger: CAGCCGGACAGCTCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGCACTGGGGTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR CCA 72 bp TGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTaGAGCTGCTGGAGCTGTCCGGCTGACCTGGAAAGT +
Preference number: 3 (lower is better)
Translates to: WERSRRARLPGT*SCWSCPADLES
Trigger: ACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR GCA 72 bp CGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTaGTGGAGCTGTCCGGCTGACCTGGAAAGTTCTTTG +
Preference number: 3 (lower is better)
Translates to: RSRRARLPGTWS*WSCPADLESSL
Trigger: CAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR CCA 72 bp AGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTGCTaGAGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCC +
Preference number: 3 (lower is better)
Translates to: SRRARLPGTWSC*SCPADLESSLA
Trigger: GGCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR GCA 72 bp CCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTaGCCCACCCAGGACTCTGTCCTTCACCCTGAAGTT +
Preference number: 3 (lower is better)
Translates to: PLAGFSGAPCSR*PTQDSVLHPEV
Trigger: AACTTCAGGGTGAAGGACAGAGTCCTGGGTGGGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR CCA 72 bp GGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTaGGTTCTCTGGTGCGCCCTGCAGCCGCTGCCCCAC +
Preference number: 3 (lower is better)
Translates to: GSNTTGTHNPSG*VLWCALQPLPH
Trigger: GTGGGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR CAA 90 bp GCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTGCTGGAGCTGACCTGGAAAGTTCTTaGGCCTCTAGGCTTTACCTG +
Preference number: 3 (lower is better)
Translates to: AGSAAGGRGCLERGAAGADLESS*ASRLYL
Trigger: CAGGTAAAGCCTAGAGGCCAAAGAACTTTCCAGGTC...AGCTCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
3UTR CCA 72 bp CTCATCCCACCTGCTGCAGGGTGGAAGCAACACCACTaGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTG +
Preference number: 3 (lower is better)
Translates to: LIPPAAGWKQHH*YSQPLWLGSLV
Trigger: CACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCTGCAGCAGGTGGGATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR CCA 72 bp ACTACACAGTGTGCAGAGCAGAGTGGGAAGAGGTCCTaGGACCCGGTTAACACAGGCAGCCCCTGCACTCAT +
Preference number: 3 (lower is better)
Translates to: TTQCAEQSGKRS*DPVNTGSPCTH
Trigger: ATGAGTGCAGGGGCTGCCTGTGTTAACCGGGTCCCAGGACCTCTTCCCACTCTGCTCTGCACACTGTGTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR CCA 72 bp CTGGAACGTGGAGCTGCTGGAGCTGTCCGGCTGACCTaGAAAGTTCTTTGGCCTCTAGGCTTTACCTGGAGG +
Preference number: 3 (lower is better)
Translates to: LERGAAGAVRLT*KVLWPLGFTWR
Trigger: CCTCCAGGTAAAGCCTAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCTCCACGTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
3UTR TCA 72 bp CCAGCGTGTTCTCAGCAGAACGGGCCGGTATTCTGCTaGCACACAGAACCAACCCCGGCCTCATGTTTCTCA +
Preference number: 3 (lower is better)
Translates to: PACSQQNGPVFC*HTEPTPASCFS
Trigger: TGAGAAACATGAGGCCGGGGTTGGTTCTGTGTGTCAGCAGAATACCGGCCCGTTCTGCTGAGAACACGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519614.5
3UTR GCA 72 bp TGGTTCACACACACACACAGACCTCATCCCACCTGCTaGAGGGTGGAAGCAACACCACTGGTACTCACAACC +
Preference number: 3 (lower is better)
Translates to: WFTHTHRPHPTC*RVEATPLVLTT
Trigger: GGTTGTGAGTACCAGTGGTGTTGCTTCCACCCTGCAGCAGGTGGGATGAGGTCTGTGTGTGTGTGTGAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR CAA 90 bp GCCCCACCCAGGACTCTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATAGGGTTGCAATGTCCTaGAGTTCTTCTCCATCTCCC +
Preference number: 3 (lower is better)
Translates to: APPRTLSFTLKFYRPGFHRVAMS*SSSPSP
Trigger: GGGAGATGGAGAAGAACTCAAGGACATTGCAACCCT...ATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAGTCCTGGGTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR CAA 90 bp ATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTCCTCTTCCTTCAGCTCCTaGTTTTTCCGCACCTCCTCG +
Preference number: 3 (lower is better)
Translates to: ICAGQGCNVLEFFSISLSSSFSS*FFRTSS
Trigger: CGAGGAGGTGCGGAAAAACAAGGAGCTGAAGGAAGA...GGAAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
3UTR GCA 72 bp TTTCCAGCCATGGTTCAGTGTCCTGGAGACCAAGACTaGTGGGTCTGGATGCCTCCTTTGCCTTCTACTAGC +
Preference number: 3 (lower is better)
Translates to: FPAMVQCPGDQD*WVWMPPLPSTS
Trigger: GCTAGTAGAAGGCAAAGGAGGCATCCAGACCCAGCAGTCTTGGTCTCCAGGACACTGAACCATGGCTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR CCA 72 bp CCAGCCATGGTTCAGTGTCCTGGAGACCAAGACTGCTaGGTCTGGATGCCTCCTTTGCCTTCTACTAGCAAA +
Preference number: 3 (lower is better)
Translates to: PAMVQCPGDQDC*VWMPPLPSTSK
Trigger: TTTGCTAGTAGAAGGCAAAGGAGGCATCCAGACCCAGCAGTCTTGGTCTCCAGGACACTGAACCATGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR CCA 72 bp GAGGAGAGCTTCTTTTCCAGCCATGGTTCAGTGTCCTaGAGACCAAGACTGCTGGGTCTGGATGCCTCCTTT +
Preference number: 3 (lower is better)
Translates to: EESFFSSHGSVS*RPRLLGLDASF
Trigger: AAAGGAGGCATCCAGACCCAGCAGTCTTGGTCTCCAGGACACTGAACCATGGCTGGAAAAGAAGCTCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR TCA 72 bp CCTGATTCAACCCACCTCACCCAGGCTCCAGATGCTTaGATGGCAGAATTAAGGAAGCAAAGGGGCATCTGC +
Preference number: 3 (lower is better)
Translates to: PDSTHLTQAPDA*MAELRKQRGIC
Trigger: GCAGATGCCCCTTTGCTTCCTTAATTCTGCCATTCAAGCATCTGGAGCCTGGGTGAGGTGGGTTGAATCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
3UTR-3UTR CAA 90 bp AAGTTCTACCGCCCTGGTTTTCATCTCTCCTCAACATGGTGCCTGGAGGCTCAATCTTCCTTCAGCTCCTaGTTTTTCCGCACCTCCTCG +
Preference number: 3 (lower is better)
Translates to: KFYRPGFHLSSTWCLEAQSSFSS*FFRTSS
Trigger: CGAGGAGGTGCGGAAAAACAAGGAGCTGAAGGAAGA...TTGAGCCTCCAGGCACCATGTTGAGGAGAGATGAAAACCAGGGCGGTAGAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
3UTR-3UTR CAA 90 bp GACTCAGGAAATGAGGCCAGCGTGTTCTCAGCAGAACGGGCCGGTATTCTGCTGGGAATGCATACCTGCTaGTCTATCTCTACTCCTTTG +
Preference number: 3 (lower is better)
Translates to: DSGNEASVFSAERAGILLGMHTC*SISTPL
Trigger: CAAAGGAGTAGAGATAGACAAGCAGGTATGCATTCC...CAGCAGAATACCGGCCCGTTCTGCTGAGAACACGCTGGCCTCATTTCCTGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519614.5
3UTR-3UTR CAA 90 bp GTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCAAGGGTTGCAATGTCCTaGAGTTCTTCTCCATCTCCC +
Preference number: 3 (lower is better)
Translates to: VKIRSAPGRVAMSLSSSPRVAMS*SSSPSP
Trigger: GGGAGATGGAGAAGAACTCAAGGACATTGCAACCCT...TGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR-3UTR CAA 90 bp CACCCAGGCTCCAGATGCTTGAATGGCAGAATTAAGGAAGCAAAGGGGCATCTGGACCTGGAAAGTTCTTaGGCCTCTAGGCTTTACCTG +
Preference number: 3 (lower is better)
Translates to: HPGSRCLNGRIKEAKGHLDLESS*ASRLYL
Trigger: CAGGTAAAGCCTAGAGGCCAAAGAACTTTCCAGGTC...CAGATGCCCCTTTGCTTCCTTAATTCTGCCATTCAAGCATCTGGAGCCTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519997.5
3UTR CCA 72 bp CTGACCTGGAAAGTTCTTTGGCCTCTAGGCTTTACCTaGAGGCCTCTTCCTTCAGCTCCTTGTTTTTCCGCA +
Preference number: 3 (lower is better)
Translates to: LTWKVLWPLGFT*RPLPSAPCFSA
Trigger: TGCGGAAAAACAAGGAGCTGAAGGAAGAGGCCTCCAGGTAAAGCCTAGAGGCCAAAGAACTTTCCAGGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
3UTR TCA 72 bp GAAGAGAAAACCTTTCAATTATGCCAAAGGCTGGCCTaGTTCAACCCACCTCACCCAGGCTCCAGATGCTTG +
Preference number: 3 (lower is better)
Translates to: EEKTFQLCQRLA*FNPPHPGSRCL
Trigger: CAAGCATCTGGAGCCTGGGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATTGAAAGGTTTTCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
3UTR TCA 72 bp CTCAAGGAAGCCCTTTTGCCCTTCCCTTCTGCCATGTaGGGATGCAGCAAAAAGGCATCATCTTTGAAGCAG +
Preference number: 3 (lower is better)
Translates to: LKEALLPFPSAM*GCSKKASSLKQ
Trigger: CTGCTTCAAAGATGATGCCTTTTTGCTGCATCCTCACATGGCAGAAGGGAAGGGCAAAAGGGCTTCCTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR GCA 72 bp TTCTACCGCCCTGGTTTTCATCTCTCCTCAACATGGTaGCTGGAGGCTCAATGTCCAGGTAGAGATGTGAAA +
Preference number: 3 (lower is better)
Translates to: FYRPGFHLSSTW*LEAQCPGRDVK
Trigger: TTTCACATCTCTACCTGGACATTGAGCCTCCAGGCACCATGTTGAGGAGAGATGAAAACCAGGGCGGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR GCA 72 bp CTGGAGACCAAGACTGCTGGGTCTGGATGCCTCCTTTaGCTTCTACTAGCAAACACTTTATTTCCTTGCTCG +
Preference number: 3 (lower is better)
Translates to: LETKTAGSGCLL*LLLANTLFPCS
Trigger: CGAGCAAGGAAATAAAGTGTTTGCTAGTAGAAGGCAAAGGAGGCATCCAGACCCAGCAGTCTTGGTCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR CCA 72 bp ATGGTTCAGTGTCCTGGAGACCAAGACTGCTGGGTCTaGATGCCTCCTTTGCCTTCTACTAGCAAACACTTT +
Preference number: 3 (lower is better)
Translates to: MVQCPGDQDCWV*MPPLPSTSKHF
Trigger: AAAGTGTTTGCTAGTAGAAGGCAAAGGAGGCATCCAGACCCAGCAGTCTTGGTCTCCAGGACACTGAACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR TCA 72 bp TTCCTGCTCAGTGGGAATCTCAGCTCATCATACCCGTaGCTTAGAGCCAAGAGCTCAAGAAAGCATCTTTCC +
Preference number: 3 (lower is better)
Translates to: FLLSGNLSSSYP*LRAKSSRKHLS
Trigger: GGAAAGATGCTTTCTTGAGCTCTTGGCTCTAAGTCACGGGTATGATGAGCTGAGATTCCCACTGAGCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519614.5
3UTR TCA 72 bp CAAACCCCCAAAGCATGGAGGACTTCTGCTATGGTGTaGATGTTGCTGTCTCCCCCAATATACAGGTTGAAT +
Preference number: 3 (lower is better)
Translates to: QTPKAWRTSAMV*MLLSPPIYRLN
Trigger: ATTCAACCTGTATATTGGGGGAGACAGCAACATTCACACCATAGCAGAAGTCCTCCATGCTTTGGGGGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR GCA 72 bp CCTAGAATCTCAAACCCCCAAAGCATGGAGGACTTCTaGTATGGTGTGAATGTTGCTGTCTCCCCCAATATA +
Preference number: 3 (lower is better)
Translates to: PRISNPQSMEDF*YGVNVAVSPNI
Trigger: TATATTGGGGGAGACAGCAACATTCACACCATAGCAGAAGTCCTCCATGCTTTGGGGGTTTGAGATTCTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR GCA 72 bp TTCAGTGTCCTGGAGACCAAGACTGCTGGGTCTGGATaGCTCCTTTGCCTTCTACTAGCAAACACTTTATTT +
Preference number: 3 (lower is better)
Translates to: FSVLETKTAGSG*LLCLLLANTLF
Trigger: AAATAAAGTGTTTGCTAGTAGAAGGCAAAGGAGGCATCCAGACCCAGCAGTCTTGGTCTCCAGGACACTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR CCA 72 bp AAACAGAAGAGAAAACCTTTCAATTATGCCAAAGGCTaGCCTGATTCAACCCACCTCACCCAGGCTCCAGAT +
Preference number: 3 (lower is better)
Translates to: KQKRKPFNYAKG*PDSTHLTQAPD
Trigger: ATCTGGAGCCTGGGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATTGAAAGGTTTTCTCTTCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
3UTR CCA 72 bp AATCTCAAACCCCCAAAGCATGGAGGACTTCTGCTATaGTGTGAATGTTGCTGTCTCCCCCAATATACAGGT +
Preference number: 3 (lower is better)
Translates to: NLKPPKHGGLLL*CECCCLPQYTG
Trigger: ACCTGTATATTGGGGGAGACAGCAACATTCACACCATAGCAGAAGTCCTCCATGCTTTGGGGGTTTGAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR CCA 72 bp TCCCACCCCGTCATTGTTCCCCGGAAACAAATAGGATaGCTTCACTGGTCAATTCTTAACATGTACAAACAC +
Preference number: 3 (lower is better)
Translates to: SHPVIVPRKQIG*LHWSILNMYKH
Trigger: GTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCATCCTATTTGTTTCCGGGGAACAATGACGGGGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR-3UTR CAA 90 bp TGCTCGTATTTTCTAATCTACCTAGAATCTCAAACCCCCAAAGCATGGAGGACTAAAAAGGCATCATCTTaGAAGCAGATGGCAAGCCCT +
Preference number: 3 (lower is better)
Translates to: CSYFLIYLESQTPKAWRTKKASS*KQMASP
Trigger: AGGGCTTGCCATCTGCTTCAAAGATGATGCCTTTTT...AGTCCTCCATGCTTTGGGGGTTTGAGATTCTAGGTAGATTAGAAAATACGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR CCA 72 bp GTCATTGTTCCCCGGAAACAAATAGGATGGCTTCACTaGTCAATTCTTAACATGTACAAACACCAAAAGCAG +
Preference number: 3 (lower is better)
Translates to: VIVPRKQIGWLH*SILNMYKHQKQ
Trigger: CTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCATCCTATTTGTTTCCGGGGAACAATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR CCA 72 bp ACAAAAGGCAACATATTGGAAAGACCTGTGACTCACTaGGTCTGTGTCAAGAGGTTTAGAGAGAATCATGTT +
Preference number: 3 (lower is better)
Translates to: TKGNILERPVTH*VCVKRFRENHV
Trigger: AACATGATTCTCTCTAAACCTCTTGACACAGACCCAGTGAGTCACAGGTCTTTCCAATATGTTGCCTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519614.5
3UTR GCA 72 bp GGAAGATTGAGTTTCTTTTCTCATCAATTTAGTGCATaGTATCCAATAAAGATTAGCCCACAGAGGGGATTT +
Preference number: 3 (lower is better)
Translates to: GRLSFFSHQFSA*YPIKISPQRGF
Trigger: AAATCCCCTCTGTGGGCTAATCTTTATTGGATAGCATGCACTAAATTGATGAGAAAAGAAACTCAATCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
3UTR TCA 72 bp CAATTACTTAGTCTAAGGTATTTTGTTACAGCAGTCTaGACGGTTGTGACTAAGACAAATTCCTTCTTACAG +
Preference number: 3 (lower is better)
Translates to: QLLSLRYFVTAV*TVVTKTNSFLQ
Trigger: CTGTAAGAAGGAATTTGTCTTAGTCACAACCGTTCAGACTGCTGTAACAAAATACCTTAGACTAAGTAATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp CAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTGCCCCACCCAGGCCCAAACCCCAGTGCTaGGAGCGCAGCCGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: QPLWLGSLVRPAAAAPPRPKPQC*ERSRRA
Trigger: CGCCCGCCGGCTGCGCTCCCAGCACTGGGGTTTGGG...CCTGGGTGGGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp AGTGCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTGCTGGACCCAAACCCCAGTGCTaGGAGCGCAGCCGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: SAGSAAGGRGCLERGAAGPKPQC*ERSRRA
Trigger: CGCCCGCCGGCTGCGCTCCCAGCACTGGGGTTTGGG...TCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGCACT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR GCA 90 bp CAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTGCCCCACCCAGGGGCTGGGTTCTCTGGTaGGCCCTGCAGCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QPLWLGSLVRPAAAAPPRGWVLW*ALQPLP
Trigger: GGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCC...CCTGGGTGGGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp CAGTGCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTGCTGGGCGGGCGAGGCTGCCTaGAACGTGGAGCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: QCWERSRRARLPGTWSCWAGEAA*NVELLE
Trigger: CTCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGC...CCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGCACTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR GCA 90 bp AGTGCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTGCTGGATTCTCTGGTGCGCCCTaGAGCCGCTGCCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: SAGSAAGGRGCLERGAAGFSGAP*SRCPTQ
Trigger: CTGGGTGGGGCAGCGGCTGCAGGGCGCACCAGAGAA...TCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGCACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp CAGTGCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTGCTGGTCTGGCTGGGTTCTCTaGTGCGCCCTGCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: QCWERSRRARLPGTWSCWSGWVL*CALQPL
Trigger: CAGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGA...CCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGCACTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp AAACCCCAGTGCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTGGGTCTCGCCGCCTTaGCAGGGAGGCGTTGAACTC +
Preference number: 4 (lower is better)
Translates to: KPQCWERSRRARLPGTWSWVSPP*QGGVEL
Trigger: GAGTTCAACGCCTCCCTGCCAAGGCGGCGAGACCCA...GCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGCACTGGGGTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp CAGTGCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTGCTGGAACATGGCGGCGAGGTaGGCCTCCCTGTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: QCWERSRRARLPGTWSCWNMAAR*ASLFSL
Trigger: CAAGGAGAACAGGGAGGCCCACCTCGCCGCCATGTT...CCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGCACTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp CAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTGCCCCACCCAGGAGGCTGCCTGGAACGTaGAGCTGCTGGAGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: QPLWLGSLVRPAAAAPPRRLPGT*SCWSCP
Trigger: CGGACAGCTCCAGCAGCTCCACGTTCCAGGCAGCCT...CCTGGGTGGGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp CACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTGCCCCACCCATGGGTCTCGCCGCCTTaGCAGGGAGGCGTTGAACTC +
Preference number: 4 (lower is better)
Translates to: HNPSGWVLWCALQPLPHPWVSPP*QGGVEL
Trigger: GAGTTCAACGCCTCCCTGCCAAGGCGGCGAGACCCA...TGGGTGGGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp AAACCCCAGTGCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCGATCTCTTCCAGGGATaGGTCTCGCCGCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: KPQCWERSRRARLPGTWSDLFQG*VSPPWQ
Trigger: CTGCCAAGGCGGCGAGACCCATCCCTGGAAGAGATC...GCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGCACTGGGGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp CTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTGCCCCACCGGAACGTGGAGCTGCTaGAGCTGTCCGGCTGACCTG +
Preference number: 4 (lower is better)
Translates to: LTTPLAGFSGAPCSRCPTGTWSC*SCPADL
Trigger: CAGGTCAGCCGGACAGCTCCAGCAGCTCCACGTTCC...GGTGGGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp CTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTGCCCCACCAGGCTGCCTGGAACGTaGAGCTGCTGGAGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: LTTPLAGFSGAPCSRCPTRLPGT*SCWSCP
Trigger: CGGACAGCTCCAGCAGCTCCACGTTCCAGGCAGCCT...GGTGGGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp CACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTGCCCCACCCACACAACCCCTCTGGCTaGGTTCTCTGGTGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: HNPSGWVLWCALQPLPHPHNPSG*VLWCAL
Trigger: CAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTG...TGGGTGGGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR TCA 90 bp AAACCCCAGTGCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTTGGCAGGGAGGCGTTaGACTCGGGAACCCCATCAA +
Preference number: 4 (lower is better)
Translates to: KPQCWERSRRARLPGTWSLAGRR*TREPHQ
Trigger: TTGATGGGGTTCCCGAGTTCAACGCCTCCCTGCCAA...GCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGCACTGGGGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR TCA 90 bp GCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTGCTGGAGCTTCCACCGTGTCTGCCTaGGCTCTTCTTTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: AGSAAGGRGCLERGAAGASTVSA*ALLSLQ
Trigger: CTGGAGAGAAAGAAGAGCTCAGGCAGACACGGTGGA...AGCTCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000523048.5
CDS-3UTR GCA 90 bp AGTGCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTGCTGGACCTGGAGACCAAGACTaGTGGGTCTGGATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SAGSAAGGRGCLERGAAGPGDQD*WVWMPP
Trigger: AGGAGGCATCCAGACCCAGCAGTCTTGGTCTCCAGG...TCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR CCA 90 bp CACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTGCAGCCGTTCCAACATaGCGGCGAGGTGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: HWYSQPLWLGSLVRPAAAAAVPT*RRGGPP
Trigger: GGGAGGCCCACCTCGCCGCCATGTTGGAACGGCTGC...AGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR TCA 90 bp CAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTGCCCCACCCAGGCTCTGTCCTTCACCCTaGAGTTCTACCGCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: QPLWLGSLVRPAAAAPPRLCPSP*SSTALV
Trigger: AACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAG...CCTGGGTGGGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR GCA 90 bp GCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTGCTGGAGCTTGCTTGTCCTTCTCTTaGAGCCGTTCCAACATGGCG +
Preference number: 4 (lower is better)
Translates to: AGSAAGGRGCLERGAAGACLSFS*SRSNMA
Trigger: CGCCATGTTGGAACGGCTGCAAGAGAAGGACAAGCA...AGCTCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265770.11
ENST00000350889.8
CDS-3UTR GCA 90 bp CCCACCTGCTGCAGGGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGCCGGCGGGCGAGGCTaGCTGGAACGTGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PTCCRVEATPLVLTTPLAAGGRG*LERGAA
Trigger: AGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGC...AGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCTGCAGCAGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp CAGTGCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTGCTGGCCTCAACATGGTGCCTaGAGGCTCAATGTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: QCWERSRRARLPGTWSCWPQHGA*RLNVQV
Trigger: TACCTGGACATTGAGCCTCCAGGCACCATGTTGAGG...CCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGCACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp CACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTTCTGGCTGGGTTCTCTaGTGCGCCCTGCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: HWYSQPLWLGSLVRPAAASGWVL*CALQPL
Trigger: CAGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGA...AGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR GCA 90 bp CAGTGCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTGCTGGTGTGAAAATCAGATCTaGGCCGGGCAGGGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: QCWERSRRARLPGTWSCWCENQI*AGQGCN
Trigger: ATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACA...CCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp CACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTAGGCTGCCTGGAACGTaGAGCTGCTGGAGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: HWYSQPLWLGSLVRPAAARLPGT*SCWSCP
Trigger: CGGACAGCTCCAGCAGCTCCACGTTCCAGGCAGCCT...AGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp GCCCCACCCAGGACTCTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATCCCAAACCCCAGTGCTaGGAGCGCAGCCGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: APPRTLSFTLKFYRPGFHPKPQC*ERSRRA
Trigger: CGCCCGCCGGCTGCGCTCCCAGCACTGGGGTTTGGG...ATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAGTCCTGGGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR TCA 90 bp AAACCCCAGTGCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCCTTCCATGTCGGAAATaGCGCACCAATTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: KPQCWERSRRARLPGTWSLPCRK*RTNSGP
Trigger: TGGACCTGAATTGGTGCGTCATTTCCGACATGGAAG...GCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGCACTGGGGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR TCA 90 bp GCACCTCCTCGGCGTGCTTGTCCATGGGACGAGGCCACCGATCAGGTCCCGGGAAGGGTGGCTTCAGGATaGCTTCAAAGGATTGGCCCG +
Preference number: 4 (lower is better)
Translates to: APPRRACPWDEATDQVPGRVASG*LQRIGP
Trigger: CGGGCCAATCCTTTGAAGTCATCCTGAAGCCACCCT...TCCCGGGACCTGATCGGTGGCCTCGTCCCATGGACAAGCACGCCGAGGAGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
CDS-3UTR GCA 90 bp GCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCCCTGGAACGTGGAGCTaGTGGAGCTGTCCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: ATPLVLTTPLAGFSGAPCPGTWS*WSCPAD
Trigger: GTCAGCCGGACAGCTCCAGCAGCTCCACGTTCCAGG...GCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp GCAGGGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGCAGCCGTTCCAACATaGCGGCGAGGTGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: AGWKQHHWYSQPLWLGSLAAVPT*RRGGPP
Trigger: GGGAGGCCCACCTCGCCGCCATGTTGGAACGGCTGC...CAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp GGAACGTGGAGCTGCTGGAGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCCTCTGCGGGCGAGGCTGCCTaGAACGTGGAGCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GTWSCWSCPADLESSLASAGEAA*NVELLE
Trigger: CTCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGC...AGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCTCCACGTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp GCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCCACAACCCCTCTGGCTaGGTTCTCTGGTGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: ATPLVLTTPLAGFSGAPCHNPSG*VLWCAL
Trigger: CAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTG...GCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR GCA 90 bp CGTGGAGCTGCTGGAGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCCTCTAGGCCCTGGAACGTGGAGCTaGTGGAGCTGTCCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: RGAAGAVRLTWKVLWPLGPGTWS*WSCPAD
Trigger: GTCAGCCGGACAGCTCCAGCAGCTCCACGTTCCAGG...GCCTAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCTCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR GCA 90 bp ACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCCCTGCACTCATGTTTaGAGGGGAAGGGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: TTGTHNPSGWVLWCALQPPCTHV*RGREEE
Trigger: CTCCTCCTCCCTTCCCCTGCAAACATGAGTGCAGGG...CGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR CCA 90 bp CCCACCTGCTGCAGGGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTTGGGTCTCGCCGCCTTaGCAGGGAGGCGTTGAACTC +
Preference number: 4 (lower is better)
Translates to: PTCCRVEATPLVLTTPLAWVSPP*QGGVEL
Trigger: GAGTTCAACGCCTCCCTGCCAAGGCGGCGAGACCCA...AGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCTGCAGCAGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp CTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTGCCCCACCCATCTCTCCTCAACATaGTGCCTGGAGGCTCAATGT +
Preference number: 4 (lower is better)
Translates to: LTTPLAGFSGAPCSRCPTHLSST*CLEAQC
Trigger: ACATTGAGCCTCCAGGCACCATGTTGAGGAGAGATG...GGTGGGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR GCA 90 bp CCCACCTGCTGCAGGGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTCGCACCTCCTCGGCGTaGTTGTCCTTCTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: PTCCRVEATPLVLTTPLARTSSA*LSFSCS
Trigger: GCTGCAAGAGAAGGACAAGCACGCCGAGGAGGTGCG...AGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCTGCAGCAGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265770.11
ENST00000350889.8
CDS-3UTR GCA 90 bp GCTGACCTGGAAAGTTCTTTGGCCTCTAGGCTTTACCTGGAGGCCTCTTCCTTCGCCGGCGGGCGAGGCTaGCTGGAACGTGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ADLESSLASRLYLEASSFAGGRG*LERGAA
Trigger: AGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGC...GAAGGAAGAGGCCTCCAGGTAAAGCCTAGAGGCCAAAGAACTTTCCAGGTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
CDS-3UTR GCA 90 bp GAGGCTCAATGTCCAGGTAGAGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGCCGGCGGGCGAGGCTaGCTGGAACGTGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: EAQCPGRDVKIRSAPGRVAGGRG*LERGAA
Trigger: AGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGC...AACCCTGCCCGGCGCAGATCTGATTTTCACATCTCTACCTGGACATTGAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR GCA 90 bp AGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTGCGCCCTGCAGCCGCTaGCCCACCCAGGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: RSAPGRVAMSLSSSPSPFAPCSR*PTQDSV
Trigger: GACAGAGTCCTGGGTGGGGCAGCGGCTGCAGGGCGC...AAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR GCA 90 bp GCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCCCTCATCCCACCTGCTaGAGGGTGGAAGCAACACCA +
Preference number: 4 (lower is better)
Translates to: ATPLVLTTPLAGFSGAPCPHPTC*RVEATP
Trigger: TGGTGTTGCTTCCACCCTGCAGCAGGTGGGATGAGG...GCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR GCA 90 bp GCCCCACCCAGGACTCTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATCGCACCTCCTCGGCGTaGTTGTCCATGGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: APPRTLSFTLKFYRPGFHRTSSA*LSMGRG
Trigger: GCCTCGTCCCATGGACAAGCACGCCGAGGAGGTGCG...ATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAGTCCTGGGTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519997.5
CDS-3UTR CCA 90 bp TTCTCAGCAGAACGGGCCGGTATTCTGCTGACACACAGAACCAACCCCGGCCTCTGGGTCTCGCCGCCTTaGCAGGGAGGCGTTGAACTC +
Preference number: 4 (lower is better)
Translates to: FSAERAGILLTHRTNPGLWVSPP*QGGVEL
Trigger: GAGTTCAACGCCTCCCTGCCAAGGCGGCGAGACCCA...GAGGCCGGGGTTGGTTCTGTGTGTCAGCAGAATACCGGCCCGTTCTGCTGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CCA 90 bp AAACCCCAGTGCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTCCTCAATGGCCTTTTaGATCACCTCTCTCTCATGT +
Preference number: 4 (lower is better)
Translates to: KPQCWERSRRARLPGTWSSSMAF*ITSLSC
Trigger: ACATGAGAGAGAGGTGATCCAAAAGGCCATTGAGGA...GCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGCACTGGGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp GGAACGTGGAGCTGCTGGAGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCCTCTAGGCTGCCTGGAACGTaGAGCTGCTGGAGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: GTWSCWSCPADLESSLASRLPGT*SCWSCP
Trigger: CGGACAGCTCCAGCAGCTCCACGTTCCAGGCAGCCT...AGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCTCCACGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp GGTAGAGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTCCCAAACCCCAGTGCTaGGAGCGCAGCCGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: GRDVKIRSAPGRVAMSLSPKPQC*ERSRRA
Trigger: CGCCCGCCGGCTGCGCTCCCAGCACTGGGGTTTGGG...ACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACATCTCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR TCA 90 bp ACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGGTCCAGGTAGAGATGTaGAAATCAGATCTGCGCCGG +
Preference number: 4 (lower is better)
Translates to: TTGTHNPSGWVLWCALQPVQVEM*KSDLRR
Trigger: CCGGCGCAGATCTGATTTTCACATCTCTACCTGGAC...CGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR GCA 90 bp GAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCGCGCCCTGCAGCCGCTaGCCCACCCAGGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: ENQICAGQGCNVLEFFSIAPCSR*PTQDSV
Trigger: GACAGAGTCCTGGGTGGGGCAGCGGCTGCAGGGCGC...GATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR GCA 90 bp GGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTCCCAAACTCTCGCGCCCTGCAGCCGCTaGCCCACCCAGGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: GQGCNVLEFFSISLSQTLAPCSR*PTQDSV
Trigger: GACAGAGTCCTGGGTGGGGCAGCGGCTGCAGGGCGC...GAGAGTTTGGGAAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR GCA 90 bp CTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATCTCTCCTCAACATGGGGCTGGGTTCTCTGGTaGGCCCTGCAGCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LSFTLKFYRPGFHLSSTWGWVLW*ALQPLP
Trigger: GGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCC...CCATGTTGAGGAGAGATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR GCA 90 bp ACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCAGGTCCACCGTGTCTaGCTGAGCTCTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TTGTHNPSGWVLWCALQPQVHRV*LSSSFS
Trigger: AGAGAAAGAAGAGCTCAGGCAGACACGGTGGACCTG...CGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR CCA 90 bp CTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTGCCCCACCCATGTTTCTGGGATCTaGTGGCTGAATCTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: LTTPLAGFSGAPCSRCPTHVSGI*WLNLAE
Trigger: TTCAGCTAGATTCAGCCACCAGATCCCAGAAACATG...GGTGGGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265770.11
ENST00000350889.8
CDS-3UTR CCA 90 bp GGAACGTGGAGCTGCTGGAGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCCTCTGATCTCTTCCAGGGATaGGTCTCGCCGCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GTWSCWSCPADLESSLASDLFQG*VSPPWQ
Trigger: CTGCCAAGGCGGCGAGACCCATCCCTGGAAGAGATC...AGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCTCCACGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp AGGGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGGAACGTGGAGCTGCTaGAGCTGTCCGGCTGACCTG +
Preference number: 4 (lower is better)
Translates to: RVEATPLVLTTPLAGFSGGTWSC*SCPADL
Trigger: CAGGTCAGCCGGACAGCTCCAGCAGCTCCACGTTCC...ACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp AGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCCTCTAGGCTTTACCTGGAGGCCGGAACGTGGAGCTGCTaGAGCTGTCCGGCTGACCTG +
Preference number: 4 (lower is better)
Translates to: SCPADLESSLASRLYLEAGTWSC*SCPADL
Trigger: CAGGTCAGCCGGACAGCTCCAGCAGCTCCACGTTCC...GGCCTCCAGGTAAAGCCTAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp GCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTGCTGGAGCTCGGAAACAAATAGGATaGCTTCACTGGTCAATTCTT +
Preference number: 4 (lower is better)
Translates to: AGSAAGGRGCLERGAAGARKQIG*LHWSIL
Trigger: AAGAATTGACCAGTGAAGCCATCCTATTTGTTTCCG...AGCTCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp CCTCTCCCACCCCGTCATTGTTCCCCGGAAACAAATAGGATGGCTTCACTGGTCTCTGGCTGGGTTCTCTaGTGCGCCCTGCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: PLPPRHCSPETNRMASLVSGWVL*CALQPL
Trigger: CAGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGA...GACCAGTGAAGCCATCCTATTTGTTTCCGGGGAACAATGACGGGGTGGGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp GCTGCTGGAGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCCTCTAGGCTTTACCCGGCGTGCTTGTCCATaGGACGAGGCCACCGATCAG +
Preference number: 4 (lower is better)
Translates to: AAGAVRLTWKVLWPLGFTRRACP*DEATDQ
Trigger: CTGATCGGTGGCCTCGTCCCATGGACAAGCACGCCG...GGTAAAGCCTAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
CDS-3UTR TCA 90 bp GGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCTGCCAAAGGCTGGCCTaGTTCAACCCACCTCACCCA +
Preference number: 4 (lower is better)
Translates to: GGSNTTGTHNPSGWVLWCCQRLA*FNPPHP
Trigger: TGGGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCA...GCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR GCA 90 bp GGTAGAGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTTCTCTGGTGCGCCCTaGAGCCGCTGCCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: GRDVKIRSAPGRVAMSLSFSGAP*SRCPTQ
Trigger: CTGGGTGGGGCAGCGGCTGCAGGGCGCACCAGAGAA...ACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACATCTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR GCA 90 bp GAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCAACACAGGCAGCCCCTaGACTCATGTTTGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: EATPLVLTTPLAGFSGAPNTGSP*THVCRG
Trigger: TCCCCTGCAAACATGAGTGCAGGGGCTGCCTGTGTT...GGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR CCA 90 bp CTGGAGGCTCAATGTCCAGGTAGAGATGTGAAAATCAGATCTGCGCCGGGCAGGTGGGTCTCGCCGCCTTaGCAGGGAGGCGTTGAACTC +
Preference number: 4 (lower is better)
Translates to: LEAQCPGRDVKIRSAPGRWVSPP*QGGVEL
Trigger: GAGTTCAACGCCTCCCTGCCAAGGCGGCGAGACCCA...CCTGCCCGGCGCAGATCTGATTTTCACATCTCTACCTGGACATTGAGCCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp CTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTGCCCCACCTGTTGTTTTCCTCAATaGCCTTTTGGATCACCTCTC +
Preference number: 4 (lower is better)
Translates to: LTTPLAGFSGAPCSRCPTCCFPQ*PFGSPL
Trigger: GAGAGGTGATCCAAAAGGCCATTGAGGAAAACAACA...GGTGGGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp GGTAGAGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTGCGGGCGAGGCTGCCTaGAACGTGGAGCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GRDVKIRSAPGRVAMSLSAGEAA*NVELLE
Trigger: CTCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGC...ACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACATCTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp GGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTCCCAAACTCTCGCGGGCGAGGCTGCCTaGAACGTGGAGCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GQGCNVLEFFSISLSQTLAGEAA*NVELLE
Trigger: CTCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGC...GAGAGTTTGGGAAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR TCA 90 bp GCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCCTTCCATGTCGGAAATaGCGCACCAATTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: ATPLVLTTPLAGFSGAPCLPCRK*RTNSGP
Trigger: TGGACCTGAATTGGTGCGTCATTTCCGACATGGAAG...GCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR TCA 90 bp GACTCAGGAAATGAGGCCAGCGTGTTCTCAGCAGAACGGGCCGGTATTCTGCTGTTGGCAGGGAGGCGTTaGACTCGGGAACCCCATCAA +
Preference number: 4 (lower is better)
Translates to: DSGNEASVFSAERAGILLLAGRR*TREPHQ
Trigger: TTGATGGGGTTCCCGAGTTCAACGCCTCCCTGCCAA...CAGCAGAATACCGGCCCGTTCTGCTGAGAACACGCTGGCCTCATTTCCTGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR TCA 90 bp GCAGGGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGTCCACCGTGTCTGCCTaGGCTCTTCTTTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: AGWKQHHWYSQPLWLGSLSTVSA*ALLSLQ
Trigger: CTGGAGAGAAAGAAGAGCTCAGGCAGACACGGTGGA...CAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR GCA 90 bp CGTGGAGCTGCTGGAGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCCTCTAGGCCAGGTCCACCGTGTCTaGCTGAGCTCTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RGAAGAVRLTWKVLWPLGQVHRV*LSSSFS
Trigger: AGAGAAAGAAGAGCTCAGGCAGACACGGTGGACCTG...GCCTAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCTCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000523048.5
CDS-3UTR GCA 90 bp GGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTCCCAAACTCTCCGCACCTCCTCGGCGTaGTTGTCCATGGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: GQGCNVLEFFSISLSQTLRTSSA*LSMGRG
Trigger: GCCTCGTCCCATGGACAAGCACGCCGAGGAGGTGCG...GAGAGTTTGGGAAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp CTGGAGGCTCAATGTCCAGGTAGAGATGTGAAAATCAGATCTGCGCCGGGCAGGGATCTCTTCCAGGGATaGGTCTCGCCGCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LEAQCPGRDVKIRSAPGRDLFQG*VSPPWQ
Trigger: CTGCCAAGGCGGCGAGACCCATCCCTGGAAGAGATC...CCTGCCCGGCGCAGATCTGATTTTCACATCTCTACCTGGACATTGAGCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR TCA 90 bp ATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTCCTTGGCAGGGAGGCGTTaGACTCGGGAACCCCATCAA +
Preference number: 4 (lower is better)
Translates to: ICAGQGCNVLEFFSISLSLAGRR*TREPHQ
Trigger: TTGATGGGGTTCCCGAGTTCAACGCCTCCCTGCCAA...GGAAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR TCA 90 bp ACCGCCCTGGTTTTCATCTCTCCTCAACATGGTGCCTGGAGGCTCAATGTCCAGCTGGAGCTGTCCGGCTaGCCTGGAAAGTTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: TALVFISPQHGAWRLNVQLELSG*PGKFFG
Trigger: GCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAG...CTGGACATTGAGCCTCCAGGCACCATGTTGAGGAGAGATGAAAACCAGGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR TCA 90 bp TCCTTGTTTTTCCGCACCTCCTCGGCGTGCTTGTCCATGGGACGAGGCCACCGACTGCCATCAGATGGATaGAAGCCAGGTTTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: SLFFRTSSACLSMGRGHRLPSDG*KPGFEN
Trigger: GTTCTCGAAACCTGGCTTTCATCCATCTGATGGCAG...TCGGTGGCCTCGTCCCATGGACAAGCACGCCGAGGAGGTGCGGAAAAACAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519997.5
CDS-3UTR TCA 90 bp TGCAGGGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGCCCTCACCAGACACTaGATCTGCTGGCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: CRVEATPLVLTTPLAGFSALTRH*ICWHLD
Trigger: ATCAAGGTGCCAGCAGATTCAGTGTCTGGTGAGGGC...AGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR GCA 90 bp GGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCACGCTGTCACCAACGTaGAGTCCAGTTAGAAGCGAG +
Preference number: 4 (lower is better)
Translates to: GGSNTTGTHNPSGWVLWCTLSPT*SPVRSE
Trigger: CTCGCTTCTAACTGGACTGCACGTTGGTGACAGCGT...GCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265770.11
ENST00000350889.8
CDS-3UTR GCA 90 bp AGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCCTCTAGGCTTTACCTGGAGGCCTGCGCCGGGCAGGGTTaGAATGTCCTTGAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SCPADLESSLASRLYLEACAGQG*NVLEFF
Trigger: GAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCA...GGCCTCCAGGTAAAGCCTAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
CDS-3UTR GCA 90 bp GGAACGTGGAGCTGCTGGAGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCCTCTCTCTCCTCAACATGGTaGCTGGAGGCTCAATGTCCA +
Preference number: 4 (lower is better)
Translates to: GTWSCWSCPADLESSLASLSSTW*LEAQCP
Trigger: TGGACATTGAGCCTCCAGGCACCATGTTGAGGAGAG...AGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCTCCACGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp GGAATCTCAGCTCATCATACCCGTGACTTAGAGCCAAGAGCTCAAGAAAGCATCGCAGCCGTTCCAACATaGCGGCGAGGTGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GISAHHTRDLEPRAQESIAAVPT*RRGGPP
Trigger: GGGAGGCCCACCTCGCCGCCATGTTGGAACGGCTGC...GATGCTTTCTTGAGCTCTTGGCTCTAAGTCACGGGTATGATGAGCTGAGATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CCA 90 bp TGCAGGGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGAGACCAAGACTGCTaGGTCTGGATGCCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: CRVEATPLVLTTPLAGFSGDQDC*VWMPPL
Trigger: CAAAGGAGGCATCCAGACCCAGCAGTCTTGGTCTCC...AGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
3UTR CAA 72 bp AGCTGCTGGAGCTGTCCGGCTGACCTGGAAAGTTCTTaGGCCTCTAGGCTTTACCTGGAGGCCTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SCWSCPADLESS*ASRLYLEASSF
Trigger: GAAGGAAGAGGCCTCCAGGTAAAGCCTAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
CDS-3UTR TCA 90 bp CGTGGAGCTGCTGGAGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCCTCTAGGCGTGGCTGAATCTAGCTaGAAGTTACAGAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: RGAAGAVRLTWKVLWPLGVAESS*KLQSGS
Trigger: AGACCCACTCTGTAACTTTCAGCTAGATTCAGCCAC...GCCTAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCTCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000523048.5
CDS-3UTR TCA 90 bp GGAGAGCTTCTTTTCCAGCCATGGTTCAGTGTCCTGGAGACCAAGACTGCTGGGAGGGTGGCTTCAGGATaGCTTCAAAGGATTGGCCCG +
Preference number: 4 (lower is better)
Translates to: GELLFQPWFSVLETKTAGRVASG*LQRIGP
Trigger: CGGGCCAATCCTTTGAAGTCATCCTGAAGCCACCCT...CCCAGCAGTCTTGGTCTCCAGGACACTGAACCATGGCTGGAAAAGAAGCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR TCA 90 bp AATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCTTGGCAGGGAGGCGTTaGACTCGGGAACCCCATCAA +
Preference number: 4 (lower is better)
Translates to: NQICAGQGCNVLEFFSISLAGRR*TREPHQ
Trigger: TTGATGGGGTTCCCGAGTTCAACGCCTCCCTGCCAA...GGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR TCA 90 bp GCTGACCTGGAAAGTTCTTTGGCCTCTAGGCTTTACCTGGAGGCCTCTTCCTTCTTGGCAGGGAGGCGTTaGACTCGGGAACCCCATCAA +
Preference number: 4 (lower is better)
Translates to: ADLESSLASRLYLEASSFLAGRR*TREPHQ
Trigger: TTGATGGGGTTCCCGAGTTCAACGCCTCCCTGCCAA...GAAGGAAGAGGCCTCCAGGTAAAGCCTAGAGGCCAAAGAACTTTCCAGGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
CDS-3UTR TCA 90 bp GAGGCTCAATGTCCAGGTAGAGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTCTGGAGCTGTCCGGCTaGCCTGGAAAGTTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: EAQCPGRDVKIRSAPGRVLELSG*PGKFFG
Trigger: GCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAG...AACCCTGCCCGGCGCAGATCTGATTTTCACATCTCTACCTGGACATTGAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR TCA 90 bp AGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTTGCCAAAGGCTGGCCTaGTTCAACCCACCTCACCCA +
Preference number: 4 (lower is better)
Translates to: RSAPGRVAMSLSSSPSPFCQRLA*FNPPHP
Trigger: TGGGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCA...AAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR TCA 90 bp GAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCAAAAGGCATCATCTTTaGAGCAGATGGCAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: EATPLVLTTPLAGFSGAPKRHHL*SRWQAL
Trigger: GAGGGCTTGCCATCTGCTTCAAAGATGATGCCTTTT...GGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR GCA 90 bp CTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATCTCTCCTCAACATGGCGCACCTCCTCGGCGTaGTTGTCCTTCTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LSFTLKFYRPGFHLSSTWRTSSA*LSFSCS
Trigger: GCTGCAAGAGAAGGACAAGCACGCCGAGGAGGTGCG...CCATGTTGAGGAGAGATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265770.11
ENST00000350889.8
CDS-3UTR GCA 90 bp AAGAGAAAACCTTTCAATTATGCCAAAGGCTGGCCTGATTCAACCCACCTCACCTTCTCTGGTGCGCCCTaGAGCCGCTGCCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: KRKPFNYAKGWPDSTHLTFSGAP*SRCPTQ
Trigger: CTGGGTGGGGCAGCGGCTGCAGGGCGCACCAGAGAA...GGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATTGAAAGGTTTTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR GCA 90 bp TTCTCAGCAGAACGGGCCGGTATTCTGCTGACACACAGAACCAACCCCGGCCTCAGGTCCCCGCATACTTaGTGCAGAAGGAAAACAGCA +
Preference number: 4 (lower is better)
Translates to: FSAERAGILLTHRTNPGLRSPHT*CRRKTA
Trigger: TGCTGTTTTCCTTCTGCAGCAAGTATGCGGGGACCT...GAGGCCGGGGTTGGTTCTGTGTGTCAGCAGAATACCGGCCCGTTCTGCTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CCA 90 bp AGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTGGTCTGTCACCAGCTTaGGACGCTGTCACCAACGTG +
Preference number: 4 (lower is better)
Translates to: RSAPGRVAMSLSSSPSPFGLSPA*DAVTNV
Trigger: CACGTTGGTGACAGCGTCCCAAGCTGGTGACAGACC...AAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000523048.5
CDS-3UTR CCA 90 bp CCCACCTGCTGCAGGGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTCCCATCAAAGGAGGGTaGCTTCAGGATGACTTCAAA +
Preference number: 4 (lower is better)
Translates to: PTCCRVEATPLVLTTPLAPIKGG*LQDDFK
Trigger: TTTGAAGTCATCCTGAAGCCACCCTCCTTTGATGGG...AGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCTGCAGCAGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp TTCTCAGCAGAACGGGCCGGTATTCTGCTGACACACAGAACCAACCCCGGCCTCCCCTGTTCTCCTTGTTaGATTCCATCTTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: FSAERAGILLTHRTNPGLPCSPC*IPSSGP
Trigger: TGGCCCAGAAGATGGAATCCAACAAGGAGAACAGGG...GAGGCCGGGGTTGGTTCTGTGTGTCAGCAGAATACCGGCCCGTTCTGCTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CCA 90 bp GGAACGTGGAGCTGCTGGAGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCCTCTCCCTGTTCTCCTTGTTaGATTCCATCTTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GTWSCWSCPADLESSLASPCSPC*IPSSGP
Trigger: TGGCCCAGAAGATGGAATCCAACAAGGAGAACAGGG...AGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCTCCACGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp GAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCAACATGGCGGCGAGGTaGGCCTCCCTGTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ENQICAGQGCNVLEFFSINMAAR*ASLFSL
Trigger: CAAGGAGAACAGGGAGGCCCACCTCGCCGCCATGTT...GATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp AGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCCTCTAGGCTTTACCTGGAGGCCGCTGTCCGGCTGACCTaGAAAGTTCTTTGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: SCPADLESSLASRLYLEAAVRLT*KVLWPL
Trigger: TAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGC...GGCCTCCAGGTAAAGCCTAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp GGCTCCAGATGCTTGAATGGCAGAATTAAGGAAGCAAAGGGGCATCTGCCATCAGGAACGTGGAGCTGCTaGAGCTGTCCGGCTGACCTG +
Preference number: 4 (lower is better)
Translates to: GSRCLNGRIKEAKGHLPSGTWSC*SCPADL
Trigger: CAGGTCAGCCGGACAGCTCCAGCAGCTCCACGTTCC...TGATGGCAGATGCCCCTTTGCTTCCTTAATTCTGCCATTCAAGCATCTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp TCCTTGTTTTTCCGCACCTCCTCGGCGTGCTTGTCCATGGGACGAGGCCACCGAGAAGTTCTACCGCCCTaGTTTTCATCTCTCCTCAAC +
Preference number: 4 (lower is better)
Translates to: SLFFRTSSACLSMGRGHREVLPP*FSSLLN
Trigger: GTTGAGGAGAGATGAAAACCAGGGCGGTAGAACTTC...TCGGTGGCCTCGTCCCATGGACAAGCACGCCGAGGAGGTGCGGAAAAACAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp AATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCCACCTGCTGCAGGGTaGAAGCAACACCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: NQICAGQGCNVLEFFSISPPAAG*KQHHWY
Trigger: GTACCAGTGGTGTTGCTTCCACCCTGCAGCAGGTGG...GGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp CGTGGAGCTGCTGGAGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCCTCTAGGCAATTATGCCAAAGGCTaGCCTGATTCAACCCACCTC +
Preference number: 4 (lower is better)
Translates to: RGAAGAVRLTWKVLWPLGNYAKG*PDSTHL
Trigger: GAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATT...GCCTAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCTCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp AAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCGGCGTGCTTGTCCATaGGACGAGGCCACCGATCAG +
Preference number: 4 (lower is better)
Translates to: KIRSAPGRVAMSLSSSPSRRACP*DEATDQ
Trigger: CTGATCGGTGGCCTCGTCCCATGGACAAGCACGCCG...AGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
CDS-3UTR TCA 90 bp GCCCCACCCAGGACTCTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATCTTCCATGTCGGAAATaGCGCACCAATTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: APPRTLSFTLKFYRPGFHLPCRK*RTNSGP
Trigger: TGGACCTGAATTGGTGCGTCATTTCCGACATGGAAG...ATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAGTCCTGGGTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR TCA 90 bp AAAATGATGGTTCACACACACACACAGACCTCATCCCACCTGCTGCAGGGTGGACTGGAGCTGTCCGGCTaGCCTGGAAAGTTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: KMMVHTHTQTSSHLLQGGLELSG*PGKFFG
Trigger: GCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAG...TCCACCCTGCAGCAGGTGGGATGAGGTCTGTGTGTGTGTGTGAACCATCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR TCA 90 bp CCCACCCAGGACTCTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATCTGTCCAGGTAGAGATGTaGAAATCAGATCTGCGCCGG +
Preference number: 4 (lower is better)
Translates to: PTQDSVLHPEVLPPWFSSVQVEM*KSDLRR
Trigger: CCGGCGCAGATCTGATTTTCACATCTCTACCTGGAC...AGATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAGTCCTGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR TCA 90 bp AATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTCTGTCCTTCACCCTaGAGTTCTACCGCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: NQICAGQGCNVLEFFSISLCPSP*SSTALV
Trigger: AACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAG...GGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR GCA 90 bp ACCGCCCTGGTTTTCATCTCTCCTCAACATGGTGCCTGGAGGCTCAATGTCCAGCAGTTAGAAGCGAGCTaGTCTCTTCCTCACTCCCTC +
Preference number: 4 (lower is better)
Translates to: TALVFISPQHGAWRLNVQQLEAS*SLPHSL
Trigger: GAGGGAGTGAGGAAGAGAGCAGCTCGCTTCTAACTG...CTGGACATTGAGCCTCCAGGCACCATGTTGAGGAGAGATGAAAACCAGGGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000519997.5
ENST00000523048.5
CDS-3UTR GCA 90 bp ATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTCCACGCTGTCACCAACGTaGAGTCCAGTTAGAAGCGAG +
Preference number: 4 (lower is better)
Translates to: ICAGQGCNVLEFFSISLSTLSPT*SPVRSE
Trigger: CTCGCTTCTAACTGGACTGCACGTTGGTGACAGCGT...GGAAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000523048.5
CDS-3UTR GCA 90 bp ATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTCCCTCTCCTCAACATGGTaGCTGGAGGCTCAATGTCCA +
Preference number: 4 (lower is better)
Translates to: ICAGQGCNVLEFFSISLSLSSTW*LEAQCP
Trigger: TGGACATTGAGCCTCCAGGCACCATGTTGAGGAGAG...GGAAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR GCA 90 bp GGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTCCCAAACTCTCCCTCATCCCACCTGCTaGAGGGTGGAAGCAACACCA +
Preference number: 4 (lower is better)
Translates to: GQGCNVLEFFSISLSQTLPHPTC*RVEATP
Trigger: TGGTGTTGCTTCCACCCTGCAGCAGGTGGGATGAGG...GAGAGTTTGGGAAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp AAGTTCTACCGCCCTGGTTTTCATCTCTCCTCAACATGGTGCCTGGAGGCTCAAGGTCTGTCACCAGCTTaGGACGCTGTCACCAACGTG +
Preference number: 4 (lower is better)
Translates to: KFYRPGFHLSSTWCLEAQGLSPA*DAVTNV
Trigger: CACGTTGGTGACAGCGTCCCAAGCTGGTGACAGACC...TTGAGCCTCCAGGCACCATGTTGAGGAGAGATGAAAACCAGGGCGGTAGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000523048.5
CDS-3UTR CCA 90 bp TTCTCAGCAGAACGGGCCGGTATTCTGCTGACACACAGAACCAACCCCGGCCTCCCCATCAAAGGAGGGTaGCTTCAGGATGACTTCAAA +
Preference number: 4 (lower is better)
Translates to: FSAERAGILLTHRTNPGLPIKGG*LQDDFK
Trigger: TTTGAAGTCATCCTGAAGCCACCCTCCTTTGATGGG...GAGGCCGGGGTTGGTTCTGTGTGTCAGCAGAATACCGGCCCGTTCTGCTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CCA 90 bp AGAGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTAACATGGCGGCGAGGTaGGCCTCCCTGTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RDVKIRSAPGRVAMSLSSNMAAR*ASLFSL
Trigger: CAAGGAGAACAGGGAGGCCCACCTCGCCGCCATGTT...AGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp GGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCCGCAGCCGTTCCAACATaGCGGCGAGGTGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GFTGQFLTCTNTKSRGNAAAVPT*RRGGPP
Trigger: GGGAGGCCCACCTCGCCGCCATGTTGGAACGGCTGC...GGCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp CCCAGGACTCTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATCTCTCCTGGAAGCAACACCACTaGTACTCACAACCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PRTLSFTLKFYRPGFHLSWKQHH*YSQPLW
Trigger: CCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCA...GGAGAGATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAGTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp GGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTCCCAAACTCTCCCACCTGCTGCAGGGTaGAAGCAACACCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: GQGCNVLEFFSISLSQTLPPAAG*KQHHWY
Trigger: GTACCAGTGGTGTTGCTTCCACCCTGCAGCAGGTGG...GAGAGTTTGGGAAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR TCA 90 bp AAGTTCTACCGCCCTGGTTTTCATCTCTCCTCAACATGGTGCCTGGAGGCTCAAAGGGTGGCTTCAGGATaGCTTCAAAGGATTGGCCCG +
Preference number: 4 (lower is better)
Translates to: KFYRPGFHLSSTWCLEAQRVASG*LQRIGP
Trigger: CGGGCCAATCCTTTGAAGTCATCCTGAAGCCACCCT...TTGAGCCTCCAGGCACCATGTTGAGGAGAGATGAAAACCAGGGCGGTAGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR TCA 90 bp GCTGACCTGGAAAGTTCTTTGGCCTCTAGGCTTTACCTGGAGGCCTCTTCCTTCGTCCAGGTAGAGATGTaGAAATCAGATCTGCGCCGG +
Preference number: 4 (lower is better)
Translates to: ADLESSLASRLYLEASSFVQVEM*KSDLRR
Trigger: CCGGCGCAGATCTGATTTTCACATCTCTACCTGGAC...GAAGGAAGAGGCCTCCAGGTAAAGCCTAGAGGCCAAAGAACTTTCCAGGTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
CDS-3UTR TCA 90 bp GGAGAGCTTCTTTTCCAGCCATGGTTCAGTGTCCTGGAGACCAAGACTGCTGGGCTGCCATCAGATGGATaGAAGCCAGGTTTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: GELLFQPWFSVLETKTAGLPSDG*KPGFEN
Trigger: GTTCTCGAAACCTGGCTTTCATCCATCTGATGGCAG...CCCAGCAGTCTTGGTCTCCAGGACACTGAACCATGGCTGGAAAAGAAGCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR GCA 90 bp ATAGGATGGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGGCCGGCGGGCGAGGCTaGCTGGAACGTGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: IGWLHWSILNMYKHQKQRAGGRG*LERGAA
Trigger: AGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGC...CCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCATCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR GCA 90 bp CCCACCCAGGACTCTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATCTTGTGAAAATCAGATCTaGGCCGGGCAGGGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: PTQDSVLHPEVLPPWFSSCENQI*AGQGCN
Trigger: ATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACA...AGATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAGTCCTGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR GCA 90 bp ATAGGATGGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGGGCTGGGTTCTCTGGTaGGCCCTGCAGCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: IGWLHWSILNMYKHQKQRGWVLW*ALQPLP
Trigger: GGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCC...CCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCATCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp GGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTCCCAAACTCTCAGGAGCTCCGCTTCCTaGTACTTCCTTCGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GQGCNVLEFFSISLSQTLRSSAS*YFLRSS
Trigger: TGAGGAGCGAAGGAAGTACCAGGAAGCGGAGCTCCT...GAGAGTTTGGGAAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp GTGTTCTCAGCAGAACGGGCCGGTATTCTGCTGACACACAGAACCAACCCCGGCTCCTCAATGGCCTTTTaGATCACCTCTCTCTCATGT +
Preference number: 4 (lower is better)
Translates to: VFSAERAGILLTHRTNPGSSMAF*ITSLSC
Trigger: ACATGAGAGAGAGGTGATCCAAAAGGCCATTGAGGA...GCCGGGGTTGGTTCTGTGTGTCAGCAGAATACCGGCCCGTTCTGCTGAGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CCA 90 bp GATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGTCTGGTGCAGCCGTTCCAACATaGCGGCGAGGTGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: DFNCVTVQNIPQGNPESGAAVPT*RRGGPP
Trigger: GGGAGGCCCACCTCGCCGCCATGTTGGAACGGCTGC...ACCAGACTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CCA 90 bp GAGGCTCAATGTCCAGGTAGAGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTCCTCTAGGCTTTACCTaGAGGCCTCTTCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: EAQCPGRDVKIRSAPGRVPLGFT*RPLPSA
Trigger: AGCTGAAGGAAGAGGCCTCCAGGTAAAGCCTAGAGG...AACCCTGCCCGGCGCAGATCTGATTTTCACATCTCTACCTGGACATTGAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp GCTTCTTTTCCAGCCATGGTTCAGTGTCCTGGAGACCAAGACTGCTGGGTCTGGCATCTCTCCTCAACATaGTGCCTGGAGGCTCAATGT +
Preference number: 4 (lower is better)
Translates to: ASFPAMVQCPGDQDCWVWHLSST*CLEAQC
Trigger: ACATTGAGCCTCCAGGCACCATGTTGAGGAGAGATG...CCAGACCCAGCAGTCTTGGTCTCCAGGACACTGAACCATGGCTGGAAAAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR CCA 90 bp AGAGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTCCACCTGCTGCAGGGTaGAAGCAACACCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: RDVKIRSAPGRVAMSLSSPPAAG*KQHHWY
Trigger: GTACCAGTGGTGTTGCTTCCACCCTGCAGCAGGTGG...AGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp GGAGCTGCTGGAGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCCTCTAGGCTTTGCATCTGCCATCAGATaGATGAAAGCCAGGTTTCGA +
Preference number: 4 (lower is better)
Translates to: GAAGAVRLTWKVLWPLGFASAIR*MKARFR
Trigger: TCGAAACCTGGCTTTCATCCATCTGATGGCAGATGC...AAAGCCTAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519997.5
CDS-3UTR CCA 90 bp CCTCTCCCACCCCGTCATTGTTCCCCGGAAACAAATAGGATGGCTTCACTGGTCCTTCTTTTCCAGCCATaGTTCAGTGTCCTGGAGACC +
Preference number: 4 (lower is better)
Translates to: PLPPRHCSPETNRMASLVLLFQP*FSVLET
Trigger: GGTCTCCAGGACACTGAACCATGGCTGGAAAAGAAG...GACCAGTGAAGCCATCCTATTTGTTTCCGGGGAACAATGACGGGGTGGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR TCA 90 bp ATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTCCGTGGCTGAATCTAGCTaGAAGTTACAGAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: ICAGQGCNVLEFFSISLSVAESS*KLQSGS
Trigger: AGACCCACTCTGTAACTTTCAGCTAGATTCAGCCAC...GGAAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000523048.5
CDS-3UTR TCA 90 bp AAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTAGGGTGGCTTCAGGATaGCTTCAAAGGATTGGCCCG +
Preference number: 4 (lower is better)
Translates to: KIRSAPGRVAMSLSSSPSRVASG*LQRIGP
Trigger: CGGGCCAATCCTTTGAAGTCATCCTGAAGCCACCCT...AGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR GCA 90 bp GCCAGCGTGTTCTCAGCAGAACGGGCCGGTATTCTGCTGACACACAGAACCAACGAGAATCATGTTTCCTaGTCAGTGGGAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ASVFSAERAGILLTHRTNENHVS*SVGISA
Trigger: AGCTGAGATTCCCACTGAGCAGGAAACATGATTCTC...GTTGGTTCTGTGTGTCAGCAGAATACCGGCCCGTTCTGCTGAGAACACGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CCA 90 bp ACCGCCCTGGTTTTCATCTCTCCTCAACATGGTGCCTGGAGGCTCAATGTCCAGCAAGGGTCATGTTTCTaGGATCTGGTGGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: TALVFISPQHGAWRLNVQQGSCF*DLVAES
Trigger: AGATTCAGCCACCAGATCCCAGAAACATGACCCTTG...CTGGACATTGAGCCTCCAGGCACCATGTTGAGGAGAGATGAAAACCAGGGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000523048.5
CDS-3UTR CCA 90 bp ACTCACTGGGTCTGTGTCAAGAGGTTTAGAGAGAATCATGTTTCCTGCTCAGTGGATCTCTTCCAGGGATaGGTCTCGCCGCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: THWVCVKRFRENHVSCSVDLFQG*VSPPWQ
Trigger: CTGCCAAGGCGGCGAGACCCATCCCTGGAAGAGATC...CACTGAGCAGGAAACATGATTCTCTCTAAACCTCTTGACACAGACCCAGTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CCA 90 bp CCCAGGACTCTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATCTCTCCGCTTCTAGTTTCTTCTaGATCTCTTCCAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: PRTLSFTLKFYRPGFHLSASSFF*ISSRDG
Trigger: CCCATCCCTGGAAGAGATCCAGAAGAAACTAGAAGC...GGAGAGATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAGTCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp ACCGCCCTGGTTTTCATCTCTCCTCAACATGGTGCCTGGAGGCTCAATGTCCAGGCTTCTAGTTTCTTCTaGATCTCTTCCAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: TALVFISPQHGAWRLNVQASSFF*ISSRDG
Trigger: CCCATCCCTGGAAGAGATCCAGAAGAAACTAGAAGC...CTGGACATTGAGCCTCCAGGCACCATGTTGAGGAGAGATGAAAACCAGGGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp AAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTAGGAGCTCCGCTTCCTaGTACTTCCTTCGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KIRSAPGRVAMSLSSSPSRSSAS*YFLRSS
Trigger: TGAGGAGCGAAGGAAGTACCAGGAAGCGGAGCTCCT...AGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp TGCAGGGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTTCCTCAATGGCCTTTTaGATCACCTCTCTCTCATGT +
Preference number: 4 (lower is better)
Translates to: CRVEATPLVLTTPLAGFSSSMAF*ITSLSC
Trigger: ACATGAGAGAGAGGTGATCCAAAAGGCCATTGAGGA...AGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp GGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCTGTTGTTTTCCTCAATaGCCTTTTGGATCACCTCTC +
Preference number: 4 (lower is better)
Translates to: GGSNTTGTHNPSGWVLWCCCFPQ*PFGSPL
Trigger: GAGAGGTGATCCAAAAGGCCATTGAGGAAAACAACA...GCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp AATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCCCTGTTCTCCTTGTTaGATTCCATCTTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: NQICAGQGCNVLEFFSISPCSPC*IPSSGP
Trigger: TGGCCCAGAAGATGGAATCCAACAAGGAGAACAGGG...GGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp CCTTTCAATTATGCCAAAGGCTGGCCTGATTCAACCCACCTCACCCAGGCTCCACCCTGTTCTCCTTGTTaGATTCCATCTTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PFNYAKGWPDSTHLTQAPPCSPC*IPSSGP
Trigger: TGGCCCAGAAGATGGAATCCAACAAGGAGAACAGGG...TGGAGCCTGGGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATTGAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp GTGACTAAGACAAATTCCTTCTTACAGTGCATCTTGGGGACCATATTAGGATGTGCAGCCGTTCCAACATaGCGGCGAGGTGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: VTKTNSFLQCILGTILGCAAVPT*RRGGPP
Trigger: GGGAGGCCCACCTCGCCGCCATGTTGGAACGGCTGC...ACATCCTAATATGGTCCCCAAGATGCACTGTAAGAAGGAATTTGTCTTAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp AAAATGATGGTTCACACACACACACAGACCTCATCCCACCTGCTGCAGGGTGGACCTCTAGGCTTTACCTaGAGGCCTCTTCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: KMMVHTHTQTSSHLLQGGPLGFT*RPLPSA
Trigger: AGCTGAAGGAAGAGGCCTCCAGGTAAAGCCTAGAGG...TCCACCCTGCAGCAGGTGGGATGAGGTCTGTGTGTGTGTGTGAACCATCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp CCTTGTTTTTCCGCACCTCCTCGGCGTGCTTGTCCATGGGACGAGGCCACCGATCGGAAACAAATAGGATaGCTTCACTGGTCAATTCTT +
Preference number: 4 (lower is better)
Translates to: PCFSAPPRRACPWDEATDRKQIG*LHWSIL
Trigger: AAGAATTGACCAGTGAAGCCATCCTATTTGTTTCCG...ATCGGTGGCCTCGTCCCATGGACAAGCACGCCGAGGAGGTGCGGAAAAACAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp AAAATGATGGTTCACACACACACACAGACCTCATCCCACCTGCTGCAGGGTGGACCTCAACATGGTGCCTaGAGGCTCAATGTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: KMMVHTHTQTSSHLLQGGPQHGA*RLNVQV
Trigger: TACCTGGACATTGAGCCTCCAGGCACCATGTTGAGG...TCCACCCTGCAGCAGGTGGGATGAGGTCTGTGTGTGTGTGTGAACCATCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp ACCGCCCTGGTTTTCATCTCTCCTCAACATGGTGCCTGGAGGCTCAATGTCCAGGAAGTTCTACCGCCCTaGTTTTCATCTCTCCTCAAC +
Preference number: 4 (lower is better)
Translates to: TALVFISPQHGAWRLNVQEVLPP*FSSLLN
Trigger: GTTGAGGAGAGATGAAAACCAGGGCGGTAGAACTTC...CTGGACATTGAGCCTCCAGGCACCATGTTGAGGAGAGATGAAAACCAGGGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp GGTAGAGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTCAAGACTGCTGGGTCTaGATGCCTCCTTTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GRDVKIRSAPGRVAMSLSQDCWV*MPPLPS
Trigger: AGAAGGCAAAGGAGGCATCCAGACCCAGCAGTCTTG...ACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACATCTCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR TCA 90 bp AAGTTCTACCGCCCTGGTTTTCATCTCTCCTCAACATGGTGCCTGGAGGCTCAATTCCCTTCTGCCATGTaGGGATGCAGCAAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: KFYRPGFHLSSTWCLEAQFPSAM*GCSKKA
Trigger: TGCCTTTTTGCTGCATCCTCACATGGCAGAAGGGAA...TTGAGCCTCCAGGCACCATGTTGAGGAGAGATGAAAACCAGGGCGGTAGAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR GCA 90 bp AAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCAGTTAGAAGCGAGCTaGTCTCTTCCTCACTCCCTC +
Preference number: 4 (lower is better)
Translates to: KIRSAPGRVAMSLSSSPSQLEAS*SLPHSL
Trigger: GAGGGAGTGAGGAAGAGAGCAGCTCGCTTCTAACTG...AGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000519997.5
ENST00000523048.5
CDS-3UTR GCA 90 bp GTGGGAATCTCAGCTCATCATACCCGTGACTTAGAGCCAAGAGCTCAAGAAAGCACGCTGTCACCAACGTaGAGTCCAGTTAGAAGCGAG +
Preference number: 4 (lower is better)
Translates to: VGISAHHTRDLEPRAQESTLSPT*SPVRSE
Trigger: CTCGCTTCTAACTGGACTGCACGTTGGTGACAGCGT...GCTTTCTTGAGCTCTTGGCTCTAAGTCACGGGTATGATGAGCTGAGATTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR GCA 90 bp GTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATGTGAAAATCAGATCTaGGCCGGGCAGGGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: VKIRSAPGRVAMSLSSSPCENQI*AGQGCN
Trigger: ATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACA...TGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR GCA 90 bp AAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCTCTCCTCAACATGGTaGCTGGAGGCTCAATGTCCA +
Preference number: 4 (lower is better)
Translates to: KIRSAPGRVAMSLSSSPSLSSTW*LEAQCP
Trigger: TGGACATTGAGCCTCCAGGCACCATGTTGAGGAGAG...AGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp CCTTTCAATTATGCCAAAGGCTGGCCTGATTCAACCCACCTCACCCAGGCTCCACAAGGGTCATGTTTCTaGGATCTGGTGGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: PFNYAKGWPDSTHLTQAPQGSCF*DLVAES
Trigger: AGATTCAGCCACCAGATCCCAGAAACATGACCCTTG...TGGAGCCTGGGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATTGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR CCA 90 bp GCTGACCTGGAAAGTTCTTTGGCCTCTAGGCTTTACCTGGAGGCCTCTTCCTTCCAAGGGTCATGTTTCTaGGATCTGGTGGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: ADLESSLASRLYLEASSFQGSCF*DLVAES
Trigger: AGATTCAGCCACCAGATCCCAGAAACATGACCCTTG...GAAGGAAGAGGCCTCCAGGTAAAGCCTAGAGGCCAAAGAACTTTCCAGGTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523048.5
CDS-3UTR CCA 90 bp CCTTCCATCAAATCAATCCATTCAGGGATGAAGCTAGGAATGCATACCTGCTTGAACATGGCGGCGAGGTaGGCCTCCCTGTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PSIKSIHSGMKLGMHTCLNMAAR*ASLFSL
Trigger: CAAGGAGAACAGGGAGGCCCACCTCGCCGCCATGTT...CAAGCAGGTATGCATTCCTAGCTTCATCCCTGAATGGATTGATTTGATGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CCA 90 bp GAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCATAGGATGGCTTCACTaGTCAATTCTTAACATGTAC +
Preference number: 4 (lower is better)
Translates to: EATPLVLTTPLAGFSGAPIGWLH*SILNMY
Trigger: GTACATGTTAAGAATTGACCAGTGAAGCCATCCTAT...GGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp AGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTGAAGTTCTACCGCCCTaGTTTTCATCTCTCCTCAAC +
Preference number: 4 (lower is better)
Translates to: RSAPGRVAMSLSSSPSPFEVLPP*FSSLLN
Trigger: GTTGAGGAGAGATGAAAACCAGGGCGGTAGAACTTC...AAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp TGCTCGTATTTTCTAATCTACCTAGAATCTCAAACCCCCAAAGCATGGAGGACTCACAACCCCTCTGGCTaGGTTCTCTGGTGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: CSYFLIYLESQTPKAWRTHNPSG*VLWCAL
Trigger: CAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTG...AGTCCTCCATGCTTTGGGGGTTTGAGATTCTAGGTAGATTAGAAAATACGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR CCA 90 bp AGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTGGAAGCAACACCACTaGTACTCACAACCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RCENQICAGQGCNVLEFFWKQHH*YSQPLW
Trigger: CCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCA...GAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR TCA 90 bp AAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCTTCCATGTCGGAAATaGCGCACCAATTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: KIRSAPGRVAMSLSSSPSLPCRK*RTNSGP
Trigger: TGGACCTGAATTGGTGCGTCATTTCCGACATGGAAG...AGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR TCA 90 bp GGCTCCAGATGCTTGAATGGCAGAATTAAGGAAGCAAAGGGGCATCTGCCATCAACTTCTGCTATGGTGTaGATGTTGCTGTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GSRCLNGRIKEAKGHLPSTSAMV*MLLSPP
Trigger: TGGGGGAGACAGCAACATTCACACCATAGCAGAAGT...TGATGGCAGATGCCCCTTTGCTTCCTTAATTCTGCCATTCAAGCATCTGGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR TCA 90 bp GGTGACACCGTTCCATTTATTGACAAAAGGCAACATATTGGAAAGACCTGTGACGGGCCGGTATTCTGCTaGCACACAGAACCAACCCCG +
Preference number: 4 (lower is better)
Translates to: GDTVPFIDKRQHIGKTCDGPVFC*HTEPTP
Trigger: CGGGGTTGGTTCTGTGTGTCAGCAGAATACCGGCCC...GTCACAGGTCTTTCCAATATGTTGCCTTTTGTCAATAAATGGAACGGTGTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR GCA 90 bp AAGAGAAAACCTTTCAATTATGCCAAAGGCTGGCCTGATTCAACCCACCTCACCTGCGCCGGGCAGGGTTaGAATGTCCTTGAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: KRKPFNYAKGWPDSTHLTCAGQG*NVLEFF
Trigger: GAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCA...GGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATTGAAAGGTTTTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR GCA 90 bp GGCTCCAGATGCTTGAATGGCAGAATTAAGGAAGCAAAGGGGCATCTGCCATCATTTGCCCTTCCCTTCTaGCATGTGAGGATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: GSRCLNGRIKEAKGHLPSFALPF*HVRMQQ
Trigger: TTGCTGCATCCTCACATGGCAGAAGGGAAGGGCAAA...TGATGGCAGATGCCCCTTTGCTTCCTTAATTCTGCCATTCAAGCATCTGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR GCA 90 bp GCTGGCCTGATTCAACCCACCTCACCCAGGCTCCAGATGCTTGAATGGCAGAATCTATGGTGTGAATGTTaGTGTCTCCCCCAATATACA +
Preference number: 4 (lower is better)
Translates to: AGLIQPTSPRLQMLEWQNLWCEC*CLPQYT
Trigger: TGTATATTGGGGGAGACAGCAACATTCACACCATAG...ATTCTGCCATTCAAGCATCTGGAGCCTGGGTGAGGTGGGTTGAATCAGGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR GCA 90 bp CCTTTCAATTATGCCAAAGGCTGGCCTGATTCAACCCACCTCACCCAGGCTCCATCTGGATGCCTCCTTTaGCTTCTACTAGCAAACACT +
Preference number: 4 (lower is better)
Translates to: PFNYAKGWPDSTHLTQAPSGCLL*LLLANT
Trigger: AGTGTTTGCTAGTAGAAGGCAAAGGAGGCATCCAGA...TGGAGCCTGGGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATTGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR GCA 90 bp CAGGACTCTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATCTCTCCTCAAAAACTACACAGTGTaGAGAGCAGAGTGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: QDSVLHPEVLPPWFSSLLKNYTV*RAEWEE
Trigger: CTCTTCCCACTCTGCTCTGCACACTGTGTAGTTTTT...GAGGAGAGATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAGTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR CCA 90 bp GTTCTACCGCCCTGGTTTTCATCTCTCCTCAACATGGTGCCTGGAGGCTCAATGCATGTTTCTGGGATCTaGTGGCTGAATCTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: VLPPWFSSLLNMVPGGSMHVSGI*WLNLAE
Trigger: TTCAGCTAGATTCAGCCACCAGATCCCAGAAACATG...CATTGAGCCTCCAGGCACCATGTTGAGGAGAGATGAAAACCAGGGCGGTAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000523048.5
CDS-3UTR CCA 90 bp AAGTTCTACCGCCCTGGTTTTCATCTCTCCTCAACATGGTGCCTGGAGGCTCAACCCATCAAAGGAGGGTaGCTTCAGGATGACTTCAAA +
Preference number: 4 (lower is better)
Translates to: KFYRPGFHLSSTWCLEAQPIKGG*LQDDFK
Trigger: TTTGAAGTCATCCTGAAGCCACCCTCCTTTGATGGG...TTGAGCCTCCAGGCACCATGTTGAGGAGAGATGAAAACCAGGGCGGTAGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp GGTAGAGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTCCCATCAAAGGAGGGTaGCTTCAGGATGACTTCAAA +
Preference number: 4 (lower is better)
Translates to: GRDVKIRSAPGRVAMSLSPIKGG*LQDDFK
Trigger: TTTGAAGTCATCCTGAAGCCACCCTCCTTTGATGGG...ACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACATCTCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp GAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCGCTTCTAGTTTCTTCTaGATCTCTTCCAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: ENQICAGQGCNVLEFFSIASSFF*ISSRDG
Trigger: CCCATCCCTGGAAGAGATCCAGAAGAAACTAGAAGC...GATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp AAGAGAAAACCTTTCAATTATGCCAAAGGCTGGCCTGATTCAACCCACCTCACCAGGAGCTCCGCTTCCTaGTACTTCCTTCGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KRKPFNYAKGWPDSTHLTRSSAS*YFLRSS
Trigger: TGAGGAGCGAAGGAAGTACCAGGAAGCGGAGCTCCT...GGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATTGAAAGGTTTTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp AGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCCCCTGTTCTCCTTGTTaGATTCCATCTTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RCENQICAGQGCNVLEFFPCSPC*IPSSGP
Trigger: TGGCCCAGAAGATGGAATCCAACAAGGAGAACAGGG...GAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp AGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCCATCTCTCCTCAACATaGTGCCTGGAGGCTCAATGT +
Preference number: 4 (lower is better)
Translates to: RCENQICAGQGCNVLEFFHLSST*CLEAQC
Trigger: ACATTGAGCCTCCAGGCACCATGTTGAGGAGAGATG...GAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp GTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCAAATTATGCCAAAGGCTaGCCTGATTCAACCCACCTC +
Preference number: 4 (lower is better)
Translates to: VKIRSAPGRVAMSLSSSPNYAKG*PDSTHL
Trigger: GAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATT...TGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
3UTR CAA 72 bp CCCTCACCAGACACTGAATCTGCTGGCACCTTGATATaGGACTTCCCAGCCTCCAAAACTGTGAGCAATCAA +
Preference number: 4 (lower is better)
Translates to: PSPDTESAGTLI*DFPASKTVSNQ
Trigger: TTGATTGCTCACAGTTTTGGAGGCTGGGAAGTCCAATATCAAGGTGCCAGCAGATTCAGTGTCTGGTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR TCA 90 bp CATGTTTCCTGCTCAGTGGGAATCTCAGCTCATCATACCCGTGACTTAGAGCCAGTGGCTGAATCTAGCTaGAAGTTACAGAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: HVSCSVGISAHHTRDLEPVAESS*KLQSGS
Trigger: AGACCCACTCTGTAACTTTCAGCTAGATTCAGCCAC...TGGCTCTAAGTCACGGGTATGATGAGCTGAGATTCCCACTGAGCAGGAAACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR TCA 90 bp TTTAGAGAGAATCATGTTTCCTGCTCAGTGGGAATCTCAGCTCATCATACCCGTAGGGTGGCTTCAGGATaGCTTCAAAGGATTGGCCCG +
Preference number: 4 (lower is better)
Translates to: FRENHVSCSVGISAHHTRRVASG*LQRIGP
Trigger: CGGGCCAATCCTTTGAAGTCATCCTGAAGCCACCCT...ACGGGTATGATGAGCTGAGATTCCCACTGAGCAGGAAACATGATTCTCTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR GCA 90 bp TCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCCCCTTGGCCACCCAGTTAGAAGCGAGCTaGTCTCTTCCTCACTCCCTC +
Preference number: 4 (lower is better)
Translates to: SILNMYKHQKQRKRPLATQLEAS*SLPHSL
Trigger: GAGGGAGTGAGGAAGAGAGCAGCTCGCTTCTAACTG...GGTGGCCAAGGGGCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000519997.5
ENST00000523048.5
CDS-3UTR GCA 90 bp GGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCCTGCGCCGGGCAGGGTTaGAATGTCCTTGAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GFTGQFLTCTNTKSRGNACAGQG*NVLEFF
Trigger: GAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCA...GGCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR GCA 90 bp AAACCTTTCAATTATGCCAAAGGCTGGCCTGATTCAACCCACCTCACCCAGGCTCACCCAGGCTCCAGATaGTTGAATGGCAGAATTAAG +
Preference number: 4 (lower is better)
Translates to: KPFNYAKGWPDSTHLTQAHPGSR*LNGRIK
Trigger: CTTAATTCTGCCATTCAAGCATCTGGAGCCTGGGTG...AGCCTGGGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATTGAAAGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR GCA 90 bp AGAGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTCACCCAGGCTCCAGATaGTTGAATGGCAGAATTAAG +
Preference number: 4 (lower is better)
Translates to: RDVKIRSAPGRVAMSLSSHPGSR*LNGRIK
Trigger: CTTAATTCTGCCATTCAAGCATCTGGAGCCTGGGTG...AGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR GCA 90 bp CTTTCCTTCCATCAAATCAATCCATTCAGGGATGAAGCTAGGAATGCATACCTGCCCCTCACCTTCTCTTaGAGCCGTTCCAACATGGCG +
Preference number: 4 (lower is better)
Translates to: LSFHQINPFRDEARNAYLPLTFS*SRSNMA
Trigger: CGCCATGTTGGAACGGCTGCAAGAGAAGGTGAGGGG...CAGGTATGCATTCCTAGCTTCATCCCTGAATGGATTGATTTGATGGAAGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CCA 90 bp GGTGACACCGTTCCATTTATTGACAAAAGGCAACATATTGGAAAGACCTGTGACGGTCTGTCACCAGCTTaGGACGCTGTCACCAACGTG +
Preference number: 4 (lower is better)
Translates to: GDTVPFIDKRQHIGKTCDGLSPA*DAVTNV
Trigger: CACGTTGGTGACAGCGTCCCAAGCTGGTGACAGACC...GTCACAGGTCTTTCCAATATGTTGCCTTTTGTCAATAAATGGAACGGTGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CCA 90 bp CAGACATATATGCTCCCTAAGGCAATGAAGGATTTTAATTGTGTAACTGTGCAGTGGGTCTCGCCGCCTTaGCAGGGAGGCGTTGAACTC +
Preference number: 4 (lower is better)
Translates to: QTYMLPKAMKDFNCVTVQWVSPP*QGGVEL
Trigger: GAGTTCAACGCCTCCCTGCCAAGGCGGCGAGACCCA...CTGCACAGTTACACAATTAAAATCCTTCATTGCCTTAGGGAGCATATATGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CCA 90 bp AGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCGCTTCTAGTTTCTTCTaGATCTCTTCCAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: RCENQICAGQGCNVLEFFASSFF*ISSRDG
Trigger: CCCATCCCTGGAAGAGATCCAGAAGAAACTAGAAGC...GAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp GGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCCAGGAGCTCCGCTTCCTaGTACTTCCTTCGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GFTGQFLTCTNTKSRGNARSSAS*YFLRSS
Trigger: TGAGGAGCGAAGGAAGTACCAGGAAGCGGAGCTCCT...GGCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp TTTAGAGAGAATCATGTTTCCTGCTCAGTGGGAATCTCAGCTCATCATACCCGTAGGAGCTCCGCTTCCTaGTACTTCCTTCGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: FRENHVSCSVGISAHHTRRSSAS*YFLRSS
Trigger: TGAGGAGCGAAGGAAGTACCAGGAAGCGGAGCTCCT...ACGGGTATGATGAGCTGAGATTCCCACTGAGCAGGAAACATGATTCTCTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CCA 90 bp GGTAGAGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCCTCAATGGCCTTTTaGATCACCTCTCTCTCATGT +
Preference number: 4 (lower is better)
Translates to: GRDVKIRSAPGRVAMSLSSSMAF*ITSLSC
Trigger: ACATGAGAGAGAGGTGATCCAAAAGGCCATTGAGGA...ACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACATCTCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp TCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCCCCTTGGCCACCCCTCTAGGCTTTACCTaGAGGCCTCTTCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SILNMYKHQKQRKRPLATPLGFT*RPLPSA
Trigger: AGCTGAAGGAAGAGGCCTCCAGGTAAAGCCTAGAGG...GGTGGCCAAGGGGCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp AGAATCTCAAACCCCCAAAGCATGGAGGACTTCTGCTATGGTGTGAATGTTGCTGCTGTCCGGCTGACCTaGAAAGTTCTTTGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: RISNPQSMEDFCYGVNVAAVRLT*KVLWPL
Trigger: TAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGC...AGCAACATTCACACCATAGCAGAAGTCCTCCATGCTTTGGGGGTTTGAGATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR CCA 90 bp AGAGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTGAAGTTCTACCGCCCTaGTTTTCATCTCTCCTCAAC +
Preference number: 4 (lower is better)
Translates to: RDVKIRSAPGRVAMSLSSEVLPP*FSSLLN
Trigger: GTTGAGGAGAGATGAAAACCAGGGCGGTAGAACTTC...AGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp TGCAGGGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTAAAGAACTGGACACTTaGAGTCAATGTTTCATTGGT +
Preference number: 4 (lower is better)
Translates to: CRVEATPLVLTTPLAGFSKELDT*SQCFIG
Trigger: ACCAATGAAACATTGACTCCAAGTGTCCAGTTCTTT...AGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp GGCTCCAGATGCTTGAATGGCAGAATTAAGGAAGCAAAGGGGCATCTGCCATCAGCATCTGCCATCAGATaGATGAAAGCCAGGTTTCGA +
Preference number: 4 (lower is better)
Translates to: GSRCLNGRIKEAKGHLPSASAIR*MKARFR
Trigger: TCGAAACCTGGCTTTCATCCATCTGATGGCAGATGC...TGATGGCAGATGCCCCTTTGCTTCCTTAATTCTGCCATTCAAGCATCTGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp CCCGACACTACAGAATTAAGAGATAGGGCCTTAAGAGGTGAGATCATGAGGACTCATGGTTCAGTGTCCTaGAGACCAAGACTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PDTTELRDRALRGEIMRTHGSVS*RPRLLG
Trigger: ACCCAGCAGTCTTGGTCTCCAGGACACTGAACCATG...AGTCCTCATGATCTCACCTCTTAAGGCCCTATCTCTTAATTCTGTAGTGTCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR TCA 90 bp ATAGGATGGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGCTGGAGCTGTCCGGCTaGCCTGGAAAGTTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: IGWLHWSILNMYKHQKQRLELSG*PGKFFG
Trigger: GCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAG...CCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCATCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR TCA 90 bp TGGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCCTCTGTCCTTCACCCTaGAGTTCTACCGCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: WLHWSILNMYKHQKQRKRLCPSP*SSTALV
Trigger: AACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAG...GCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR TCA 90 bp GATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGTCTGGTTCCACCGTGTCTGCCTaGGCTCTTCTTTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: DFNCVTVQNIPQGNPESGSTVSA*ALLSLQ
Trigger: CTGGAGAGAAAGAAGAGCTCAGGCAGACACGGTGGA...ACCAGACTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522908.1
CDS-3UTR TCA 90 bp ATGAAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGGCTTCCTCCCTGAGATaGTCAGCAGGTCCCCGCATA +
Preference number: 4 (lower is better)
Translates to: MKDFNCVTVQNIPQGNPEASSLR*SAGPRI
Trigger: TATGCGGGGACCTGCTGATCATCTCAGGGAGGAAGC...CTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR GCA 90 bp GGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCCACGCTGTCACCAACGTaGAGTCCAGTTAGAAGCGAG +
Preference number: 4 (lower is better)
Translates to: GFTGQFLTCTNTKSRGNATLSPT*SPVRSE
Trigger: CTCGCTTCTAACTGGACTGCACGTTGGTGACAGCGT...GGCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000523048.5
CDS-3UTR GCA 90 bp CTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCCCCCTCTCCTCAACATGGTaGCTGGAGGCTCAATGTCCA +
Preference number: 4 (lower is better)
Translates to: LHWSILNMYKHQKQRKRPLSSTW*LEAQCP
Trigger: TGGACATTGAGCCTCCAGGCACCATGTTGAGGAGAG...GGGGCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR GCA 90 bp ATAGGATGGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGCCTCATCCCACCTGCTaGAGGGTGGAAGCAACACCA +
Preference number: 4 (lower is better)
Translates to: IGWLHWSILNMYKHQKQRPHPTC*RVEATP
Trigger: TGGTGTTGCTTCCACCCTGCAGCAGGTGGGATGAGG...CCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCATCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR GCA 90 bp CCCAGGACTCTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATCTCTCCAATTCCTTCTTACAGTaGATCTTGGGGACCATATTA +
Preference number: 4 (lower is better)
Translates to: PRTLSFTLKFYRPGFHLSNSFLQ*ILGTIL
Trigger: TAATATGGTCCCCAAGATGCACTGTAAGAAGGAATT...GGAGAGATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAGTCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR GCA 90 bp CCCGACACTACAGAATTAAGAGATAGGGCCTTAAGAGGTGAGATCATGAGGACTTCAAGGAAGCCCTTTTaGCCTTCCCTTCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: PDTTELRDRALRGEIMRTSRKPF*PSLLPC
Trigger: ACATGGCAGAAGGGAAGGGCAAAAGGGCTTCCTTGA...AGTCCTCATGATCTCACCTCTTAAGGCCCTATCTCTTAATTCTGTAGTGTCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR GCA 90 bp AAGAGAAAACCTTTCAATTATGCCAAAGGCTGGCCTGATTCAACCCACCTCACCACTGCTGGGTCTGGATaGCTCCTTTGCCTTCTACTA +
Preference number: 4 (lower is better)
Translates to: KRKPFNYAKGWPDSTHLTTAGSG*LLCLLL
Trigger: TAGTAGAAGGCAAAGGAGGCATCCAGACCCAGCAGT...GGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATTGAAAGGTTTTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR CCA 90 bp ATAGGATGGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGGGTCTGTCACCAGCTTaGGACGCTGTCACCAACGTG +
Preference number: 4 (lower is better)
Translates to: IGWLHWSILNMYKHQKQRGLSPA*DAVTNV
Trigger: CACGTTGGTGACAGCGTCCCAAGCTGGTGACAGACC...CCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCATCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000523048.5
CDS-3UTR CCA 90 bp ATGAAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGGGTCTGTCACCAGCTTaGGACGCTGTCACCAACGTG +
Preference number: 4 (lower is better)
Translates to: MKDFNCVTVQNIPQGNPEGLSPA*DAVTNV
Trigger: CACGTTGGTGACAGCGTCCCAAGCTGGTGACAGACC...CTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CCA 90 bp AGAGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTCATGTTTCTGGGATCTaGTGGCTGAATCTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: RDVKIRSAPGRVAMSLSSHVSGI*WLNLAE
Trigger: TTCAGCTAGATTCAGCCACCAGATCCCAGAAACATG...AGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000523048.5
CDS-3UTR CCA 90 bp GGAATCTCAGCTCATCATACCCGTGACTTAGAGCCAAGAGCTCAAGAAAGCATCCAAGGGTCATGTTTCTaGGATCTGGTGGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: GISAHHTRDLEPRAQESIQGSCF*DLVAES
Trigger: AGATTCAGCCACCAGATCCCAGAAACATGACCCTTG...GATGCTTTCTTGAGCTCTTGGCTCTAAGTCACGGGTATGATGAGCTGAGATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CCA 90 bp CAGACATATATGCTCCCTAAGGCAATGAAGGATTTTAATTGTGTAACTGTGCAGAACATGGCGGCGAGGTaGGCCTCCCTGTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: QTYMLPKAMKDFNCVTVQNMAAR*ASLFSL
Trigger: CAAGGAGAACAGGGAGGCCCACCTCGCCGCCATGTT...CTGCACAGTTACACAATTAAAATCCTTCATTGCCTTAGGGAGCATATATGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CCA 90 bp CCTCTCCCACCCCGTCATTGTTCCCCGGAAACAAATAGGATGGCTTCACTGGTCAAAGAACTGGACACTTaGAGTCAATGTTTCATTGGT +
Preference number: 4 (lower is better)
Translates to: PLPPRHCSPETNRMASLVKELDT*SQCFIG
Trigger: ACCAATGAAACATTGACTCCAAGTGTCCAGTTCTTT...GACCAGTGAAGCCATCCTATTTGTTTCCGGGGAACAATGACGGGGTGGGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp ATAGGATGGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAGTGGGAAGAGGTCCTaGGACCCGGTTAACACAGGC +
Preference number: 4 (lower is better)
Translates to: IGWLHWSILNMYKHQKQRSGKRS*DPVNTG
Trigger: GCCTGTGTTAACCGGGTCCCAGGACCTCTTCCCACT...CCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCATCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR TCA 90 bp CAGACATATATGCTCCCTAAGGCAATGAAGGATTTTAATTGTGTAACTGTGCAGTTGGCAGGGAGGCGTTaGACTCGGGAACCCCATCAA +
Preference number: 4 (lower is better)
Translates to: QTYMLPKAMKDFNCVTVQLAGRR*TREPHQ
Trigger: TTGATGGGGTTCCCGAGTTCAACGCCTCCCTGCCAA...CTGCACAGTTACACAATTAAAATCCTTCATTGCCTTAGGGAGCATATATGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR GCA 90 bp GGTGACACCGTTCCATTTATTGACAAAAGGCAACATATTGGAAAGACCTGTGACCAGTTAGAAGCGAGCTaGTCTCTTCCTCACTCCCTC +
Preference number: 4 (lower is better)
Translates to: GDTVPFIDKRQHIGKTCDQLEAS*SLPHSL
Trigger: GAGGGAGTGAGGAAGAGAGCAGCTCGCTTCTAACTG...GTCACAGGTCTTTCCAATATGTTGCCTTTTGTCAATAAATGGAACGGTGTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR GCA 90 bp CAGGACTCTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATCTCTCCTCAATTCCTTCTTACAGTaGATCTTGGGGACCATATTA +
Preference number: 4 (lower is better)
Translates to: QDSVLHPEVLPPWFSSLLNSFLQ*ILGTIL
Trigger: TAATATGGTCCCCAAGATGCACTGTAAGAAGGAATT...GAGGAGAGATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp CCTCCTTTGCCTTCTACTAGCAAACACTTTATTTCCTTGCTCGTATTTTCTAATGATCTCTTCCAGGGATaGGTCTCGCCGCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PPLPSTSKHFISLLVFSNDLFQG*VSPPWQ
Trigger: CTGCCAAGGCGGCGAGACCCATCCCTGGAAGAGATC...ATTAGAAAATACGAGCAAGGAAATAAAGTGTTTGCTAGTAGAAGGCAAAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR CCA 90 bp AAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGTCTAGGAGCTCCGCTTCCTaGTACTTCCTTCGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KDFNCVTVQNIPQGNPESRSSAS*YFLRSS
Trigger: TGAGGAGCGAAGGAAGTACCAGGAAGCGGAGCTCCT...AGACTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CCA 90 bp CATGTTTCCTGCTCAGTGGGAATCTCAGCTCATCATACCCGTGACTTAGAGCCATGTTGTTTTCCTCAATaGCCTTTTGGATCACCTCTC +
Preference number: 4 (lower is better)
Translates to: HVSCSVGISAHHTRDLEPCCFPQ*PFGSPL
Trigger: GAGAGGTGATCCAAAAGGCCATTGAGGAAAACAACA...TGGCTCTAAGTCACGGGTATGATGAGCTGAGATTCCCACTGAGCAGGAAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CCA 90 bp TGGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCGCTGTCCGGCTGACCTaGAAAGTTCTTTGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: WLHWSILNMYKHQKQRKRAVRLT*KVLWPL
Trigger: TAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGC...GCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp CAGGACTCTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATCTCTCCTCATAGGATGGCTTCACTaGTCAATTCTTAACATGTAC +
Preference number: 4 (lower is better)
Translates to: QDSVLHPEVLPPWFSSLLIGWLH*SILNMY
Trigger: GTACATGTTAAGAATTGACCAGTGAAGCCATCCTAT...GAGGAGAGATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp GAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCCGGAAACAAATAGGATaGCTTCACTGGTCAATTCTT +
Preference number: 4 (lower is better)
Translates to: ENQICAGQGCNVLEFFSIRKQIG*LHWSIL
Trigger: AAGAATTGACCAGTGAAGCCATCCTATTTGTTTCCG...GATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp GTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCACGGAAACAAATAGGATaGCTTCACTGGTCAATTCTT +
Preference number: 4 (lower is better)
Translates to: VKIRSAPGRVAMSLSSSPRKQIG*LHWSIL
Trigger: AAGAATTGACCAGTGAAGCCATCCTATTTGTTTCCG...TGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp TGGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCCCTCAACATGGTGCCTaGAGGCTCAATGTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: WLHWSILNMYKHQKQRKRPQHGA*RLNVQV
Trigger: TACCTGGACATTGAGCCTCCAGGCACCATGTTGAGG...GCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR TCA 90 bp CAGACATATATGCTCCCTAAGGCAATGAAGGATTTTAATTGTGTAACTGTGCAGAGGGTGGCTTCAGGATaGCTTCAAAGGATTGGCCCG +
Preference number: 4 (lower is better)
Translates to: QTYMLPKAMKDFNCVTVQRVASG*LQRIGP
Trigger: CGGGCCAATCCTTTGAAGTCATCCTGAAGCCACCCT...CTGCACAGTTACACAATTAAAATCCTTCATTGCCTTAGGGAGCATATATGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR TCA 90 bp AGAGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTCAGCCTCCAAAACTGTaGGCAATCAATTTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: RDVKIRSAPGRVAMSLSSQPPKL*AINFCY
Trigger: ATAACAGAAATTGATTGCTCACAGTTTTGGAGGCTG...AGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR GCA 90 bp ATGAAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGCAGTTAGAAGCGAGCTaGTCTCTTCCTCACTCCCTC +
Preference number: 4 (lower is better)
Translates to: MKDFNCVTVQNIPQGNPEQLEAS*SLPHSL
Trigger: GAGGGAGTGAGGAAGAGAGCAGCTCGCTTCTAACTG...CTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR GCA 90 bp ATGAAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGACGCTGTCACCAACGTaGAGTCCAGTTAGAAGCGAG +
Preference number: 4 (lower is better)
Translates to: MKDFNCVTVQNIPQGNPETLSPT*SPVRSE
Trigger: CTCGCTTCTAACTGGACTGCACGTTGGTGACAGCGT...CTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR GCA 90 bp ATAGGATGGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGTGCTTGTCCTTCTCTTaGAGCCGTTCCAACATGGCG +
Preference number: 4 (lower is better)
Translates to: IGWLHWSILNMYKHQKQRCLSFS*SRSNMA
Trigger: CGCCATGTTGGAACGGCTGCAAGAGAAGGACAAGCA...CCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCATCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265770.11
ENST00000350889.8
CDS-3UTR GCA 90 bp TGGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCTGTGAAAATCAGATCTaGGCCGGGCAGGGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: WLHWSILNMYKHQKQRKRCENQI*AGQGCN
Trigger: ATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACA...GCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR GCA 90 bp GATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGTCTGGTAGGTCCCCGCATACTTaGTGCAGAAGGAAAACAGCA +
Preference number: 4 (lower is better)
Translates to: DFNCVTVQNIPQGNPESGRSPHT*CRRKTA
Trigger: TGCTGTTTTCCTTCTGCAGCAAGTATGCGGGGACCT...ACCAGACTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CCA 90 bp AGAATCTCAAACCCCCAAAGCATGGAGGACTTCTGCTATGGTGTGAATGTTGCTGTTTCTGGGATCTGGTaGCTGAATCTAGCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: RISNPQSMEDFCYGVNVAVSGIW*LNLAES
Trigger: ACTTTCAGCTAGATTCAGCCACCAGATCCCAGAAAC...AGCAACATTCACACCATAGCAGAAGTCCTCCATGCTTTGGGGGTTTGAGATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR CCA 90 bp AATCAGACATATATGCTCCCTAAGGCAATGAAGGATTTTAATTGTGTAACTGTGGATCTCTTCCAGGGATaGGTCTCGCCGCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: NQTYMLPKAMKDFNCVTVDLFQG*VSPPWQ
Trigger: CTGCCAAGGCGGCGAGACCCATCCCTGGAAGAGATC...CACAGTTACACAATTAAAATCCTTCATTGCCTTAGGGAGCATATATGTCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CCA 90 bp TCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCCCCTTGGCCACCTCCTCAATGGCCTTTTaGATCACCTCTCTCTCATGT +
Preference number: 4 (lower is better)
Translates to: SILNMYKHQKQRKRPLATSSMAF*ITSLSC
Trigger: ACATGAGAGAGAGGTGATCCAAAAGGCCATTGAGGA...GGTGGCCAAGGGGCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp GAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCATAGGATGGCTTCACTaGTCAATTCTTAACATGTAC +
Preference number: 4 (lower is better)
Translates to: ENQICAGQGCNVLEFFSIIGWLH*SILNMY
Trigger: GTACATGTTAAGAATTGACCAGTGAAGCCATCCTAT...GATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp GTGACTAAGACAAATTCCTTCTTACAGTGCATCTTGGGGACCATATTAGGATGTTGGAAGCAACACCACTaGTACTCACAACCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: VTKTNSFLQCILGTILGCWKQHH*YSQPLW
Trigger: CCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCA...ACATCCTAATATGGTCCCCAAGATGCACTGTAAGAAGGAATTTGTCTTAGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR TCA 90 bp AAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGTCTCTTCCATGTCGGAAATaGCGCACCAATTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: KDFNCVTVQNIPQGNPESLPCRK*RTNSGP
Trigger: TGGACCTGAATTGGTGCGTCATTTCCGACATGGAAG...AGACTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR TCA 90 bp AATCAGACATATATGCTCCCTAAGGCAATGAAGGATTTTAATTGTGTAACTGTGGCTTCCTCCCTGAGATaGTCAGCAGGTCCCCGCATA +
Preference number: 4 (lower is better)
Translates to: NQTYMLPKAMKDFNCVTVASSLR*SAGPRI
Trigger: TATGCGGGGACCTGCTGATCATCTCAGGGAGGAAGC...CACAGTTACACAATTAAAATCCTTCATTGCCTTAGGGAGCATATATGTCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR TCA 90 bp CAGACATATATGCTCCCTAAGGCAATGAAGGATTTTAATTGTGTAACTGTGCAGATCCTGATTTTTGCCTaGGGCTGCTTCCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: QTYMLPKAMKDFNCVTVQILIFA*GCFLPE
Trigger: CTCAGGGAGGAAGCAGCCTCAGGCAAAAATCAGGAT...CTGCACAGTTACACAATTAAAATCCTTCATTGCCTTAGGGAGCATATATGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR TCA 90 bp AAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGTCTCCCCCAAGGAAACCCTaGGTCTGGTTCCTATTTCTT +
Preference number: 4 (lower is better)
Translates to: KDFNCVTVQNIPQGNPESPPRKP*VWFLFL
Trigger: AAGAAATAGGAACCAGACTCAGGGTTTCCTTGGGGG...AGACTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR TCA 90 bp ATGAAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGAGCTCATCATACCCGTaGCTTAGAGCCAAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: MKDFNCVTVQNIPQGNPESSSYP*LRAKSS
Trigger: TGAGCTCTTGGCTCTAAGTCACGGGTATGATGAGCT...CTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR GCA 90 bp AATCAGACATATATGCTCCCTAAGGCAATGAAGGATTTTAATTGTGTAACTGTGCCCCTCACCTTCTCTTaGAGCCGTTCCAACATGGCG +
Preference number: 4 (lower is better)
Translates to: NQTYMLPKAMKDFNCVTVPLTFS*SRSNMA
Trigger: CGCCATGTTGGAACGGCTGCAAGAGAAGGTGAGGGG...CACAGTTACACAATTAAAATCCTTCATTGCCTTAGGGAGCATATATGTCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CCA 90 bp TTTAGAGAGAATCATGTTTCCTGCTCAGTGGGAATCTCAGCTCATCATACCCGTGTTTCTGGGATCTGGTaGCTGAATCTAGCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: FRENHVSCSVGISAHHTRVSGIW*LNLAES
Trigger: ACTTTCAGCTAGATTCAGCCACCAGATCCCAGAAAC...ACGGGTATGATGAGCTGAGATTCCCACTGAGCAGGAAACATGATTCTCTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CCA 90 bp CTTTCCTTCCATCAAATCAATCCATTCAGGGATGAAGCTAGGAATGCATACCTGGCTTCTAGTTTCTTCTaGATCTCTTCCAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: LSFHQINPFRDEARNAYLASSFF*ISSRDG
Trigger: CCCATCCCTGGAAGAGATCCAGAAGAAACTAGAAGC...CAGGTATGCATTCCTAGCTTCATCCCTGAATGGATTGATTTGATGGAAGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CCA 90 bp AGAATCTCAAACCCCCAAAGCATGGAGGACTTCTGCTATGGTGTGAATGTTGCTTGTTGTTTTCCTCAATaGCCTTTTGGATCACCTCTC +
Preference number: 4 (lower is better)
Translates to: RISNPQSMEDFCYGVNVACCFPQ*PFGSPL
Trigger: GAGAGGTGATCCAAAAGGCCATTGAGGAAAACAACA...AGCAACATTCACACCATAGCAGAAGTCCTCCATGCTTTGGGGGTTTGAGATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR CCA 90 bp AAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGTCTCCCTGTTCTCCTTGTTaGATTCCATCTTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: KDFNCVTVQNIPQGNPESPCSPC*IPSSGP
Trigger: TGGCCCAGAAGATGGAATCCAACAAGGAGAACAGGG...AGACTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CCA 90 bp ATAGGATGGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGCATCTCTCCTCAACATaGTGCCTGGAGGCTCAATGT +
Preference number: 4 (lower is better)
Translates to: IGWLHWSILNMYKHQKQRHLSST*CLEAQC
Trigger: ACATTGAGCCTCCAGGCACCATGTTGAGGAGAGATG...CCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCATCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
3UTR CAA 72 bp GTGACACCGTTCCATTTATTGACAAAAGGCAACATATaGGAAAGACCTGTGACTCACTGGGTCTGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: VTPFHLLTKGNI*ERPVTHWVCVK
Trigger: CTTGACACAGACCCAGTGAGTCACAGGTCTTTCCAATATGTTGCCTTTTGTCAATAAATGGAACGGTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR TCA 90 bp ATAGGATGGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGGTGGCTGAATCTAGCTaGAAGTTACAGAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: IGWLHWSILNMYKHQKQRVAESS*KLQSGS
Trigger: AGACCCACTCTGTAACTTTCAGCTAGATTCAGCCAC...CCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCATCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000523048.5
CDS-3UTR TCA 90 bp CAGACATATATGCTCCCTAAGGCAATGAAGGATTTTAATTGTGTAACTGTGCAGCCCCCAAGGAAACCCTaGGTCTGGTTCCTATTTCTT +
Preference number: 4 (lower is better)
Translates to: QTYMLPKAMKDFNCVTVQPPRKP*VWFLFL
Trigger: AAGAAATAGGAACCAGACTCAGGGTTTCCTTGGGGG...CTGCACAGTTACACAATTAAAATCCTTCATTGCCTTAGGGAGCATATATGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR TCA 90 bp AAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGTCTTATTGGAAAGACCTGTaGCTCACTGGGTCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: KDFNCVTVQNIPQGNPESYWKDL*LTGSVS
Trigger: TGACACAGACCCAGTGAGTCACAGGTCTTTCCAATA...AGACTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR GCA 90 bp AAATCAATCCATTCAGGGATGAAGCTAGGAATGCATACCTGCTTGTCTATCTCTAAAGATCCTGATTTTTaGCTGAGGCTGCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: KSIHSGMKLGMHTCLSISKDPDF*LRLLPP
Trigger: GGGAGGAAGCAGCCTCAGGCAAAAATCAGGATCTTT...AGAGATAGACAAGCAGGTATGCATTCCTAGCTTCATCCCTGAATGGATTGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR GCA 90 bp AAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGTCTAAAGATCCTGATTTTTaGCTGAGGCTGCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: KDFNCVTVQNIPQGNPESKDPDF*LRLLPP
Trigger: GGGAGGAAGCAGCCTCAGGCAAAAATCAGGATCTTT...AGACTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR GCA 90 bp CCTTCCATCAAATCAATCCATTCAGGGATGAAGCTAGGAATGCATACCTGCTTGCTAGGAATGCATACCTaGTTGTCTATCTCTACTCCT +
Preference number: 4 (lower is better)
Translates to: PSIKSIHSGMKLGMHTCLLGMHT*LSISTP
Trigger: AGGAGTAGAGATAGACAAGCAGGTATGCATTCCTAG...CAAGCAGGTATGCATTCCTAGCTTCATCCCTGAATGGATTGATTTGATGGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CCA 90 bp TGGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCGTTTCTGGGATCTGGTaGCTGAATCTAGCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: WLHWSILNMYKHQKQRKRVSGIW*LNLAES
Trigger: ACTTTCAGCTAGATTCAGCCACCAGATCCCAGAAAC...GCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000523048.5
CDS-3UTR CCA 90 bp GGTGACACCGTTCCATTTATTGACAAAAGGCAACATATTGGAAAGACCTGTGACCATGTTTCTGGGATCTaGTGGCTGAATCTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: GDTVPFIDKRQHIGKTCDHVSGI*WLNLAE
Trigger: TTCAGCTAGATTCAGCCACCAGATCCCAGAAACATG...GTCACAGGTCTTTCCAATATGTTGCCTTTTGTCAATAAATGGAACGGTGTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CCA 90 bp ATGAAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGCAAGGGTCATGTTTCTaGGATCTGGTGGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: MKDFNCVTVQNIPQGNPEQGSCF*DLVAES
Trigger: AGATTCAGCCACCAGATCCCAGAAACATGACCCTTG...CTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CCA 90 bp ATAGGATGGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGCCCATCAAAGGAGGGTaGCTTCAGGATGACTTCAAA +
Preference number: 4 (lower is better)
Translates to: IGWLHWSILNMYKHQKQRPIKGG*LQDDFK
Trigger: TTTGAAGTCATCCTGAAGCCACCCTCCTTTGATGGG...CCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCATCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CCA 90 bp ATGAAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGCCCATCAAAGGAGGGTaGCTTCAGGATGACTTCAAA +
Preference number: 4 (lower is better)
Translates to: MKDFNCVTVQNIPQGNPEPIKGG*LQDDFK
Trigger: TTTGAAGTCATCCTGAAGCCACCCTCCTTTGATGGG...CTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CCA 90 bp TTTAGAGAGAATCATGTTTCCTGCTCAGTGGGAATCTCAGCTCATCATACCCGTATGTTTCCTGCTCAGTaGGAATCTCAGCTCATCATA +
Preference number: 4 (lower is better)
Translates to: FRENHVSCSVGISAHHTRMFPAQ*ESQLII
Trigger: TATGATGAGCTGAGATTCCCACTGAGCAGGAAACAT...ACGGGTATGATGAGCTGAGATTCCCACTGAGCAGGAAACATGATTCTCTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR TCA 90 bp CAGACATATATGCTCCCTAAGGCAATGAAGGATTTTAATTGTGTAACTGTGCAGGTGGCTGAATCTAGCTaGAAGTTACAGAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: QTYMLPKAMKDFNCVTVQVAESS*KLQSGS
Trigger: AGACCCACTCTGTAACTTTCAGCTAGATTCAGCCAC...CTGCACAGTTACACAATTAAAATCCTTCATTGCCTTAGGGAGCATATATGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR TCA 90 bp AATCAGACATATATGCTCCCTAAGGCAATGAAGGATTTTAATTGTGTAACTGTGATCCTGATTTTTGCCTaGGGCTGCTTCCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: NQTYMLPKAMKDFNCVTVILIFA*GCFLPE
Trigger: CTCAGGGAGGAAGCAGCCTCAGGCAAAAATCAGGAT...CACAGTTACACAATTAAAATCCTTCATTGCCTTAGGGAGCATATATGTCTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR GCA 90 bp AATCAGACATATATGCTCCCTAAGGCAATGAAGGATTTTAATTGTGTAACTGTGCAGGTCCACCGTGTCTaGCTGAGCTCTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: NQTYMLPKAMKDFNCVTVQVHRV*LSSSFS
Trigger: AGAGAAAGAAGAGCTCAGGCAGACACGGTGGACCTG...CACAGTTACACAATTAAAATCCTTCATTGCCTTAGGGAGCATATATGTCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522908.1
CDS-3UTR CCA 90 bp AAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGTCTGTTTCTGGGATCTGGTaGCTGAATCTAGCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: KDFNCVTVQNIPQGNPESVSGIW*LNLAES
Trigger: ACTTTCAGCTAGATTCAGCCACCAGATCCCAGAAAC...AGACTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CCA 90 bp ATGAAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGCATGTTTCTGGGATCTaGTGGCTGAATCTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: MKDFNCVTVQNIPQGNPEHVSGI*WLNLAE
Trigger: TTCAGCTAGATTCAGCCACCAGATCCCAGAAACATG...CTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CCA 90 bp CAGACATATATGCTCCCTAAGGCAATGAAGGATTTTAATTGTGTAACTGTGCAGGCTTCTAGTTTCTTCTaGATCTCTTCCAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: QTYMLPKAMKDFNCVTVQASSFF*ISSRDG
Trigger: CCCATCCCTGGAAGAGATCCAGAAGAAACTAGAAGC...CTGCACAGTTACACAATTAAAATCCTTCATTGCCTTAGGGAGCATATATGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CCA 90 bp TGGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCTGTTGTTTTCCTCAATaGCCTTTTGGATCACCTCTC +
Preference number: 4 (lower is better)
Translates to: WLHWSILNMYKHQKQRKRCCFPQ*PFGSPL
Trigger: GAGAGGTGATCCAAAAGGCCATTGAGGAAAACAACA...GCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR TCA 90 bp AATCAGACATATATGCTCCCTAAGGCAATGAAGGATTTTAATTGTGTAACTGTGCTTCCATGTCGGAAATaGCGCACCAATTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: NQTYMLPKAMKDFNCVTVLPCRK*RTNSGP
Trigger: TGGACCTGAATTGGTGCGTCATTTCCGACATGGAAG...CACAGTTACACAATTAAAATCCTTCATTGCCTTAGGGAGCATATATGTCTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CCA 90 bp ATGAAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGTGTTGTTTTCCTCAATaGCCTTTTGGATCACCTCTC +
Preference number: 4 (lower is better)
Translates to: MKDFNCVTVQNIPQGNPECCFPQ*PFGSPL
Trigger: GAGAGGTGATCCAAAAGGCCATTGAGGAAAACAACA...CTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CCA 90 bp AATCAGACATATATGCTCCCTAAGGCAATGAAGGATTTTAATTGTGTAACTGTGAGACCTGTGACTCACTaGGTCTGTGTCAAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: NQTYMLPKAMKDFNCVTVRPVTH*VCVKRF
Trigger: AAACCTCTTGACACAGACCCAGTGAGTCACAGGTCT...CACAGTTACACAATTAAAATCCTTCATTGCCTTAGGGAGCATATATGTCTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519614.5
3UTR CAA 72 bp GTTGTGACTAAGACAAATTCCTTCTTACAGTGCATCTaGGGGACCATATTAGGATGTCAGTTCATTGAAAGG +
Preference number: 4 (lower is better)
Translates to: VVTKTNSFLQCI*GTILGCQFIER
Trigger: CCTTTCAATGAACTGACATCCTAATATGGTCCCCAAGATGCACTGTAAGAAGGAATTTGTCTTAGTCACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CCA 90 bp AATCAGACATATATGCTCCCTAAGGCAATGAAGGATTTTAATTGTGTAACTGTGTCCTCAATGGCCTTTTaGATCACCTCTCTCTCATGT +
Preference number: 4 (lower is better)
Translates to: NQTYMLPKAMKDFNCVTVSSMAF*ITSLSC
Trigger: ACATGAGAGAGAGGTGATCCAAAAGGCCATTGAGGA...CACAGTTACACAATTAAAATCCTTCATTGCCTTAGGGAGCATATATGTCTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CCA 90 bp GTGACTAAGACAAATTCCTTCTTACAGTGCATCTTGGGGACCATATTAGGATGTATAGGATGGCTTCACTaGTCAATTCTTAACATGTAC +
Preference number: 4 (lower is better)
Translates to: VTKTNSFLQCILGTILGCIGWLH*SILNMY
Trigger: GTACATGTTAAGAATTGACCAGTGAAGCCATCCTAT...ACATCCTAATATGGTCCCCAAGATGCACTGTAAGAAGGAATTTGTCTTAGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CAA 90 bp AAACCCCAGTGCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCCTTGGCAGGGAGGCGTaGAACTCGGGAACCCCATCA +
Preference number: 5 (lower is better)
Translates to: KPQCWERSRRARLPGTWSLGREA*NSGTPS
Trigger: TGATGGGGTTCCCGAGTTCAACGCCTCCCTGCCAAG...GCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGCACTGGGGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp AGTGCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTGCTGGAAGGCGGTTCCTTCTCTaGCAGCCGTTCCAACATGGC +
Preference number: 5 (lower is better)
Translates to: SAGSAAGGRGCLERGAAGRRFLL*QPFQHG
Trigger: GCCATGTTGGAACGGCTGCAAGAGAAGGAACCGCCT...TCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp CAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTGCCCCACCCAGGGTGCTTGTCCTTCTCTaGCAGCCGTTCCAACATGGC +
Preference number: 5 (lower is better)
Translates to: QPLWLGSLVRPAAAAPPRVLVLL*QPFQHG
Trigger: GCCATGTTGGAACGGCTGCAAGAGAAGGACAAGCAC...CCTGGGTGGGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265770.11
ENST00000350889.8
CDS CCA 90 bp CGGCACTGGGAAGGAAACTGTCTCGGGAGGAGAGATTCACGGGACTaGGGTCGGGGTGCAGGACCTATGAGGACAGGACACAGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: RHWEGNCLGRRDSRD*GRGAGPMRTGHRAP
Trigger: GGGGGCCCTGTGTCCTGTCCTCATAGGTCCTGCACCCCGACCCCAGTCCCGTGAATCTCTCCTCCCGAGACAGTTTCCTTCCCAGTGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522750.1
CDS-3UTR CAA 90 bp AGTGCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTGCTGGATCTTCCTTCAGCTCCTaGTTTTTCCGCACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: SAGSAAGGRGCLERGAAGSSFSS*FFRTSS
Trigger: CGAGGAGGTGCGGAAAAACAAGGAGCTGAAGGAAGA...TCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp GCTGGGAGCGCAGCCGGCGGGCGAGGCTGCCTGGAACGTGGAGCTGCTGGAGCTAGGGTTGCAATGTCCTaGAGTTCTTCTCCATCTCCC +
Preference number: 5 (lower is better)
Translates to: AGSAAGGRGCLERGAAGARVAMS*SSSPSP
Trigger: GGGAGATGGAGAAGAACTCAAGGACATTGCAACCCT...AGCTCCAGCAGCTCCACGTTCCAGGCAGCCTCGCCCGCCGGCTGCGCTCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp CACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTACCTCCTCGGCGTGCTaGTCCTTCTCTTGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: HWYSQPLWLGSLVRPAAATSSAC*SFSCSR
Trigger: ACGGCTGCAAGAGAAGGACAAGCACGCCGAGGAGGT...AGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265770.11
ENST00000350889.8
CDS GCA 90 bp TGTCCCAGGAAACTCCTCTCTAGCCAGGGACCCCTCACCTTCTCTTaGAGCCGTTCCAACATGGCGGCGAGGTGGGCCTCCCTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: CPRKLLSSQGPLTFS*SRSNMAARWASLFS
Trigger: GGAGAACAGGGAGGCCCACCTCGCCGCCATGTTGGAACGGCTGCAAGAGAAGGTGAGGGGTCCCTGGCTAGAGAGGAGTTTCCTGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS TCA 90 bp CCCAGGCTGGACCACTGCAGCTCAGACCCTCGGGCTCACCCGCTGTaGTTTCATCGGCACTGGGAAGGAAACTGTCTCGGGAGGAGAGAT +
Preference number: 5 (lower is better)
Translates to: PRLDHCSSDPRAHPL*FHRHWEGNCLGRRD
Trigger: ATCTCTCCTCCCGAGACAGTTTCCTTCCCAGTGCCGATGAAATCACAGCGGGTGAGCCCGAGGGTCTGAGCTGCAGTGGTCCAGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522750.1
CDS-3UTR CAA 90 bp CTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCTGCCCCACCTTCCTCAATGGCCTTTaGGATCACCTCTCTCTCATG +
Preference number: 5 (lower is better)
Translates to: LTTPLAGFSGAPCSRCPTFLNGL*DHLSLM
Trigger: CATGAGAGAGAGGTGATCCAAAAGGCCATTGAGGAA...GGTGGGGCAGCGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS CCA 90 bp GATTTGCTGGATGCATGCACAGAGGTGACAAGATCGAGTGCACTCTaGGGGGCGCCTGATGCAGACCTTCATGGCCTCCCCCTAGTGCCC +
Preference number: 5 (lower is better)
Translates to: DLLDACTEVTRSSAL*GAPDADLHGLPLVP
Trigger: GGGCACTAGGGGGAGGCCATGAAGGTCTGCATCAGGCGCCCCCCAGAGTGCACTCGATCTTGTCACCTCTGTGCATGCATCCAGCAAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522750.1
CDS-3UTR CAA 90 bp GCAGGGTGGAAGCAACACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGGGTCTGTCACCAGCTaGGGACGCTGTCACCAACGT +
Preference number: 5 (lower is better)
Translates to: AGWKQHHWYSQPLWLGSLGSVTS*GRCHQR
Trigger: ACGTTGGTGACAGCGTCCCAAGCTGGTGACAGACCC...CAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGTGTTGCTTCCACCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265770.11
ENST00000350889.8
CDS-3UTR CAA 90 bp GACTCAGGAAATGAGGCCAGCGTGTTCTCAGCAGAACGGGCCGGTATTCTGCTGCTTGGCAGGGAGGCGTaGAACTCGGGAACCCCATCA +
Preference number: 5 (lower is better)
Translates to: DSGNEASVFSAERAGILLLGREA*NSGTPS
Trigger: TGATGGGGTTCCCGAGTTCAACGCCTCCCTGCCAAG...CAGCAGAATACCGGCCCGTTCTGCTGAGAACACGCTGGCCTCATTTCCTGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CAA 90 bp GGAACGTGGAGCTGCTGGAGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCCTCTGTGCTTGTCCTTCTCTaGCAGCCGTTCCAACATGGC +
Preference number: 5 (lower is better)
Translates to: GTWSCWSCPADLESSLASVLVLL*QPFQHG
Trigger: GCCATGTTGGAACGGCTGCAAGAGAAGGACAAGCAC...AGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCTCCACGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265770.11
ENST00000350889.8
CDS-3UTR CAA 90 bp GCTGGCCTGATTCAACCCACCTCACCCAGGCTCCAGATGCTTGAATGGCAGAATACCTCCTCGGCGTGCTaGTCCTTCTCTTGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: AGLIQPTSPRLQMLEWQNTSSAC*SFSCSR
Trigger: ACGGCTGCAAGAGAAGGACAAGCACGCCGAGGAGGT...ATTCTGCCATTCAAGCATCTGGAGCCTGGGTGAGGTGGGTTGAATCAGGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR CAA 90 bp ACCACTGGTACTCACAACCCCTCTGGCTGGGTTCTCTGGTGCGCCCTGCAGCCGCCAGGCTCCAGATGCTaGAATGGCAGAATTAAGGAA +
Preference number: 5 (lower is better)
Translates to: TTGTHNPSGWVLWCALQPPGSRC*NGRIKE
Trigger: TTCCTTAATTCTGCCATTCAAGCATCTGGAGCCTGG...CGGCTGCAGGGCGCACCAGAGAACCCAGCCAGAGGGGTTGTGAGTACCAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CAA 90 bp AATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTGGCAGGGAGGCGTaGAACTCGGGAACCCCATCA +
Preference number: 5 (lower is better)
Translates to: NQICAGQGCNVLEFFSISLGREA*NSGTPS
Trigger: TGATGGGGTTCCCGAGTTCAACGCCTCCCTGCCAAG...GGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp GTGTTCTCAGCAGAACGGGCCGGTATTCTGCTGACACACAGAACCAACCCCGGCGCCTCCCTGTTCTCCTaGTTGGATTCCATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: VFSAERAGILLTHRTNPGASLFS*LDSIFW
Trigger: CCAGAAGATGGAATCCAACAAGGAGAACAGGGAGGC...GCCGGGGTTGGTTCTGTGTGTCAGCAGAATACCGGCCCGTTCTGCTGAGAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CAA 90 bp CGTGGAGCTGCTGGAGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCCTCTAGGCGTCTGGATGCCTCCTTaGCCTTCTACTAGCAAACAC +
Preference number: 5 (lower is better)
Translates to: RGAAGAVRLTWKVLWPLGVWMPP*PSTSKH
Trigger: GTGTTTGCTAGTAGAAGGCAAAGGAGGCATCCAGAC...GCCTAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCTCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS GCA 90 bp GGCTGCTTCCTCCCTGAGATGATCAGCAGGTCCCCGCATACTTGCTaGAGAAGGAAAACAGCATGTCCCAGGAAACTCCTCTCTAGCCAG +
Preference number: 5 (lower is better)
Translates to: GCFLPEMISRSPHTC*RRKTACPRKLLSSQ
Trigger: CTGGCTAGAGAGGAGTTTCCTGGGACATGCTGTTTTCCTTCTGCAGCAAGTATGCGGGGACCTGCTGATCATCTCAGGGAGGAAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CAA 90 bp GGTAGAGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTCTTGGCAGGGAGGCGTaGAACTCGGGAACCCCATCA +
Preference number: 5 (lower is better)
Translates to: GRDVKIRSAPGRVAMSLSLGREA*NSGTPS
Trigger: TGATGGGGTTCCCGAGTTCAACGCCTCCCTGCCAAG...ACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACATCTCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp GCCAGCGTGTTCTCAGCAGAACGGGCCGGTATTCTGCTGACACACAGAACCAACTCCCTGTTCTCCTTGTaGGATTCCATCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: ASVFSAERAGILLTHRTNSLFSL*DSIFWA
Trigger: GGCCCAGAAGATGGAATCCAACAAGGAGAACAGGGA...GTTGGTTCTGTGTGTCAGCAGAATACCGGCCCGTTCTGCTGAGAACACGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CAA 90 bp GGAGCTGCTGGAGCTGTCCGGCTGACCTGGAAAGTTCTTTGGCCTCTAGGCTTTTCTTCCTTCAGCTCCTaGTTTTTCCGCACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: GAAGAVRLTWKVLWPLGFSSFSS*FFRTSS
Trigger: CGAGGAGGTGCGGAAAAACAAGGAGCTGAAGGAAGA...AAAGCCTAGAGGCCAAAGAACTTTCCAGGTCAGCCGGACAGCTCCAGCAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp GAGGCTCAATGTCCAGGTAGAGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTTGGCCCGAGGTGCATTaGTTCAGCTCGATGACTTCC +
Preference number: 5 (lower is better)
Translates to: EAQCPGRDVKIRSAPGRVWPEVH*FSSMTS
Trigger: GGAAGTCATCGAGCTGAACAAATGCACCTCGGGCCA...AACCCTGCCCGGCGCAGATCTGATTTTCACATCTCTACCTGGACATTGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp AAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCTTGGCAGGGAGGCGTaGAACTCGGGAACCCCATCA +
Preference number: 5 (lower is better)
Translates to: KIRSAPGRVAMSLSSSPSLGREA*NSGTPS
Trigger: TGATGGGGTTCCCGAGTTCAACGCCTCCCTGCCAAG...AGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp ATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTCCTCCCTGTTCTCCTTGTaGGATTCCATCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: ICAGQGCNVLEFFSISLSSLFSL*DSIFWA
Trigger: GGCCCAGAAGATGGAATCCAACAAGGAGAACAGGGA...GGAAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp GAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCAGGCGGTTCCTTCTCTaGCAGCCGTTCCAACATGGC +
Preference number: 5 (lower is better)
Translates to: ENQICAGQGCNVLEFFSIRRFLL*QPFQHG
Trigger: GCCATGTTGGAACGGCTGCAAGAGAAGGAACCGCCT...GATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519997.5
ENST00000523048.5
CDS TCA 90 bp AGGCAGCAAGGGTCATGTTTCTGGGATCTGGTGGCTGAATCTAGCTaGAAGTTACAGAGTGGGTCTGTCACCAGCTTGGGACGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: RQQGSCFWDLVAESS*KLQSGSVTSLGRCH
Trigger: GTGACAGCGTCCCAAGCTGGTGACAGACCCACTCTGTAACTTTCAGCTAGATTCAGCCACCAGATCCCAGAAACATGACCCTTGCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519614.5
ENST00000522750.1
ENST00000522908.1
ENST00000523048.5
CDS-3UTR CAA 90 bp CAGGACTCTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATCTCTCCTCTCCCTGTTCTCCTTGTaGGATTCCATCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: QDSVLHPEVLPPWFSSLLSLFSL*DSIFWA
Trigger: GGCCCAGAAGATGGAATCCAACAAGGAGAACAGGGA...GAGGAGAGATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAGAGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CAA 90 bp CCTTTCAATTATGCCAAAGGCTGGCCTGATTCAACCCACCTCACCCAGGCTCCATCTTCCTTCAGCTCCTaGTTTTTCCGCACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: PFNYAKGWPDSTHLTQAPSSFSS*FFRTSS
Trigger: CGAGGAGGTGCGGAAAAACAAGGAGCTGAAGGAAGA...TGGAGCCTGGGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATTGAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CAA 90 bp ATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTCCGACCTGGAAAGTTCTTaGGCCTCTAGGCTTTACCTG +
Preference number: 5 (lower is better)
Translates to: ICAGQGCNVLEFFSISLSDLESS*ASRLYL
Trigger: CAGGTAAAGCCTAGAGGCCAAAGAACTTTCCAGGTC...GGAAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp ATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTCCAGGGTTGCAATGTCCTaGAGTTCTTCTCCATCTCCC +
Preference number: 5 (lower is better)
Translates to: ICAGQGCNVLEFFSISLSRVAMS*SSSPSP
Trigger: GGGAGATGGAGAAGAACTCAAGGACATTGCAACCCT...GGAAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp GCTGGCCTGATTCAACCCACCTCACCCAGGCTCCAGATGCTTGAATGGCAGAATAGGGTTGCAATGTCCTaGAGTTCTTCTCCATCTCCC +
Preference number: 5 (lower is better)
Translates to: AGLIQPTSPRLQMLEWQNRVAMS*SSSPSP
Trigger: GGGAGATGGAGAAGAACTCAAGGACATTGCAACCCT...ATTCTGCCATTCAAGCATCTGGAGCCTGGGTGAGGTGGGTTGAATCAGGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CAA 90 bp TTCAATTATGCCAAAGGCTGGCCTGATTCAACCCACCTCACCCAGGCTCCAGATCTCAAGGAAGCCCTTTaGCCCTTCCCTTCTGCCATG +
Preference number: 5 (lower is better)
Translates to: FNYAKGWPDSTHLTQAPDLKEAL*PFPSAM
Trigger: CATGGCAGAAGGGAAGGGCAAAAGGGCTTCCTTGAG...ATCTGGAGCCTGGGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR CAA 90 bp CCCGACACTACAGAATTAAGAGATAGGGCCTTAAGAGGTGAGATCATGAGGACTGGGTCTGTCACCAGCTaGGGACGCTGTCACCAACGT +
Preference number: 5 (lower is better)
Translates to: PDTTELRDRALRGEIMRTGSVTS*GRCHQR
Trigger: ACGTTGGTGACAGCGTCCCAAGCTGGTGACAGACCC...AGTCCTCATGATCTCACCTCTTAAGGCCCTATCTCTTAATTCTGTAGTGTCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS-3UTR CAA 90 bp ACTCACTGGGTCTGTGTCAAGAGGTTTAGAGAGAATCATGTTTCCTGCTCAGTGGGGTCTGTCACCAGCTaGGGACGCTGTCACCAACGT +
Preference number: 5 (lower is better)
Translates to: THWVCVKRFRENHVSCSVGSVTS*GRCHQR
Trigger: ACGTTGGTGACAGCGTCCCAAGCTGGTGACAGACCC...CACTGAGCAGGAAACATGATTCTCTCTAAACCTCTTGACACAGACCCAGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CAA 90 bp AAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTTGGCCCGAGGTGCATTaGTTCAGCTCGATGACTTCC +
Preference number: 5 (lower is better)
Translates to: KIRSAPGRVAMSLSSSPSWPEVH*FSSMTS
Trigger: GGAAGTCATCGAGCTGAACAAATGCACCTCGGGCCA...AGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp CTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATCTCTCCTCAACATGGTCCCTGTTCTCCTTGTaGGATTCCATCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LSFTLKFYRPGFHLSSTWSLFSL*DSIFWA
Trigger: GGCCCAGAAGATGGAATCCAACAAGGAGAACAGGGA...CCATGTTGAGGAGAGATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CAA 90 bp AAGTTCTACCGCCCTGGTTTTCATCTCTCCTCAACATGGTGCCTGGAGGCTCAATCCCTGTTCTCCTTGTaGGATTCCATCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: KFYRPGFHLSSTWCLEAQSLFSL*DSIFWA
Trigger: GGCCCAGAAGATGGAATCCAACAAGGAGAACAGGGA...TTGAGCCTCCAGGCACCATGTTGAGGAGAGATGAAAACCAGGGCGGTAGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp CTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATCTCTCCTCAACATGGGCCTCCCTGTTCTCCTaGTTGGATTCCATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: LSFTLKFYRPGFHLSSTWASLFS*LDSIFW
Trigger: CCAGAAGATGGAATCCAACAAGGAGAACAGGGAGGC...CCATGTTGAGGAGAGATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CAA 90 bp GAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCTTCCTTCAGCTCCTaGTTTTTCCGCACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: ENQICAGQGCNVLEFFSISSFSS*FFRTSS
Trigger: CGAGGAGGTGCGGAAAAACAAGGAGCTGAAGGAAGA...GATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp GAGGCTCAATGTCCAGGTAGAGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGACCTGGAAAGTTCTTaGGCCTCTAGGCTTTACCTG +
Preference number: 5 (lower is better)
Translates to: EAQCPGRDVKIRSAPGRVDLESS*ASRLYL
Trigger: CAGGTAAAGCCTAGAGGCCAAAGAACTTTCCAGGTC...AACCCTGCCCGGCGCAGATCTGATTTTCACATCTCTACCTGGACATTGAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp GGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCCGGGTCTGTCACCAGCTaGGGACGCTGTCACCAACGT +
Preference number: 5 (lower is better)
Translates to: GFTGQFLTCTNTKSRGNAGSVTS*GRCHQR
Trigger: ACGTTGGTGACAGCGTCCCAAGCTGGTGACAGACCC...GGCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000523048.5
CDS-3UTR CAA 90 bp GAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCAGGGTTGCAATGTCCTaGAGTTCTTCTCCATCTCCC +
Preference number: 5 (lower is better)
Translates to: ENQICAGQGCNVLEFFSIRVAMS*SSSPSP
Trigger: GGGAGATGGAGAAGAACTCAAGGACATTGCAACCCT...GATGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp GGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCATCTCCCTTTCCCAAACTCTCTTCCTCAATGGCCTTTaGGATCACCTCTCTCTCATG +
Preference number: 5 (lower is better)
Translates to: GQGCNVLEFFSISLSQTLFLNGL*DHLSLM
Trigger: CATGAGAGAGAGGTGATCCAAAAGGCCATTGAGGAA...GAGAGTTTGGGAAAGGGAGATGGAGAAGAACTCAAGGACATTGCAACCCTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp AGATGTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCGACCTGGAAAGTTCTTaGGCCTCTAGGCTTTACCTG +
Preference number: 5 (lower is better)
Translates to: RCENQICAGQGCNVLEFFDLESS*ASRLYL
Trigger: CAGGTAAAGCCTAGAGGCCAAAGAACTTTCCAGGTC...GAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp CTGTCCTTCACCCTGAAGTTCTACCGCCCTGGTTTTCATCTCTCCTCAACATGGCCAGGCTCCAGATGCTaGAATGGCAGAATTAAGGAA +
Preference number: 5 (lower is better)
Translates to: LSFTLKFYRPGFHLSSTWPGSRC*NGRIKE
Trigger: TTCCTTAATTCTGCCATTCAAGCATCTGGAGCCTGG...CCATGTTGAGGAGAGATGAAAACCAGGGCGGTAGAACTTCAGGGTGAAGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CAA 90 bp CCTTCCATCAAATCAATCCATTCAGGGATGAAGCTAGGAATGCATACCTGCTTGACCCCTCACCTTCTCTaGCAGCCGTTCCAACATGGC +
Preference number: 5 (lower is better)
Translates to: PSIKSIHSGMKLGMHTCLTPHLL*QPFQHG
Trigger: GCCATGTTGGAACGGCTGCAAGAGAAGGTGAGGGGT...CAAGCAGGTATGCATTCCTAGCTTCATCCCTGAATGGATTGATTTGATGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS CCA 90 bp CATCTTCTCTTTGTAGGCAGCAAGGGTCATGTTTCTGGGATCTGGTaGCTGAATCTAGCTGAAAGTTACAGAGTGGGTCTGTCACCAGCT +
Preference number: 5 (lower is better)
Translates to: HLLFVGSKGHVSGIW*LNLAESYRVGLSPA
Trigger: AGCTGGTGACAGACCCACTCTGTAACTTTCAGCTAGATTCAGCCACCAGATCCCAGAAACATGACCCTTGCTGCCTACAAAGAGAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519614.5
ENST00000522750.1
ENST00000522908.1
ENST00000523048.5
CDS-3UTR CAA 90 bp AAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGTCTGGGTCTGTCACCAGCTaGGGACGCTGTCACCAACGT +
Preference number: 5 (lower is better)
Translates to: KDFNCVTVQNIPQGNPESGSVTS*GRCHQR
Trigger: ACGTTGGTGACAGCGTCCCAAGCTGGTGACAGACCC...AGACTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CAA 90 bp AAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGTCTCTTGGCAGGGAGGCGTaGAACTCGGGAACCCCATCA +
Preference number: 5 (lower is better)
Translates to: KDFNCVTVQNIPQGNPESLGREA*NSGTPS
Trigger: TGATGGGGTTCCCGAGTTCAACGCCTCCCTGCCAAG...AGACTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CAA 90 bp AAACCTTTCAATTATGCCAAAGGCTGGCCTGATTCAACCCACCTCACCCAGGCTTTCCTCAATGGCCTTTaGGATCACCTCTCTCTCATG +
Preference number: 5 (lower is better)
Translates to: KPFNYAKGWPDSTHLTQAFLNGL*DHLSLM
Trigger: CATGAGAGAGAGGTGATCCAAAAGGCCATTGAGGAA...AGCCTGGGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATTGAAAGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CAA 90 bp GTGGGAATCTCAGCTCATCATACCCGTGACTTAGAGCCAAGAGCTCAAGAAAGCTTCCTCAATGGCCTTTaGGATCACCTCTCTCTCATG +
Preference number: 5 (lower is better)
Translates to: VGISAHHTRDLEPRAQESFLNGL*DHLSLM
Trigger: CATGAGAGAGAGGTGATCCAAAAGGCCATTGAGGAA...GCTTTCTTGAGCTCTTGGCTCTAAGTCACGGGTATGATGAGCTGAGATTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CAA 90 bp TCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCCCCTTGGCCACCGCCTCCCTGTTCTCCTaGTTGGATTCCATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: SILNMYKHQKQRKRPLATASLFS*LDSIFW
Trigger: CCAGAAGATGGAATCCAACAAGGAGAACAGGGAGGC...GGTGGCCAAGGGGCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp GTGAAAATCAGATCTGCGCCGGGCAGGGTTGCAATGTCCTTGAGTTCTTCTCCAAAAAAGGCATCATCTTaGAAGCAGATGGCAAGCCCT +
Preference number: 5 (lower is better)
Translates to: VKIRSAPGRVAMSLSSSPKKASS*KQMASP
Trigger: AGGGCTTGCCATCTGCTTCAAAGATGATGCCTTTTT...TGGAGAAGAACTCAAGGACATTGCAACCCTGCCCGGCGCAGATCTGATTTTCAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350889.8
CDS CCA 90 bp CTTCATCTTCTCTTTGTAGGCAGCAAGGGTCATGTTTCTGGGATCTaGTGGCTGAATCTAGCTGAAAGTTACAGAGTGGGTCTGTCACCA +
Preference number: 5 (lower is better)
Translates to: LHLLFVGSKGHVSGI*WLNLAESYRVGLSP
Trigger: TGGTGACAGACCCACTCTGTAACTTTCAGCTAGATTCAGCCACCAGATCCCAGAAACATGACCCTTGCTGCCTACAAAGAGAAGATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519614.5
ENST00000522750.1
ENST00000522908.1
ENST00000523048.5
CDS-3UTR CAA 90 bp TGGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCTGGCCCGAGGTGCATTaGTTCAGCTCGATGACTTCC +
Preference number: 5 (lower is better)
Translates to: WLHWSILNMYKHQKQRKRWPEVH*FSSMTS
Trigger: GGAAGTCATCGAGCTGAACAAATGCACCTCGGGCCA...GCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp CTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCCCCGCCTCCCTGTTCTCCTaGTTGGATTCCATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: LHWSILNMYKHQKQRKRPASLFS*LDSIFW
Trigger: CCAGAAGATGGAATCCAACAAGGAGAACAGGGAGGC...GGGGCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp GGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCCGCCTCCCTGTTCTCCTaGTTGGATTCCATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GFTGQFLTCTNTKSRGNAASLFS*LDSIFW
Trigger: CCAGAAGATGGAATCCAACAAGGAGAACAGGGAGGC...GGCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp TTCAATTATGCCAAAGGCTGGCCTGATTCAACCCACCTCACCCAGGCTCCAGATTTCTTACAGTGCATCTaGGGGACCATATTAGGATGT +
Preference number: 5 (lower is better)
Translates to: FNYAKGWPDSTHLTQAPDFLQCI*GTILGC
Trigger: ACATCCTAATATGGTCCCCAAGATGCACTGTAAGAA...ATCTGGAGCCTGGGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CAA 90 bp AAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGTCTACCCCTCACCTTCTCTaGCAGCCGTTCCAACATGGC +
Preference number: 5 (lower is better)
Translates to: KDFNCVTVQNIPQGNPESTPHLL*QPFQHG
Trigger: GCCATGTTGGAACGGCTGCAAGAGAAGGTGAGGGGT...AGACTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CAA 90 bp AAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGTCTTGGCCCGAGGTGCATTaGTTCAGCTCGATGACTTCC +
Preference number: 5 (lower is better)
Translates to: KDFNCVTVQNIPQGNPESWPEVH*FSSMTS
Trigger: GGAAGTCATCGAGCTGAACAAATGCACCTCGGGCCA...AGACTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CAA 90 bp GATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGTCTGGTGCCTCCCTGTTCTCCTaGTTGGATTCCATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: DFNCVTVQNIPQGNPESGASLFS*LDSIFW
Trigger: CCAGAAGATGGAATCCAACAAGGAGAACAGGGAGGC...ACCAGACTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CAA 90 bp AAACCTTTCAATTATGCCAAAGGCTGGCCTGATTCAACCCACCTCACCCAGGCTTTCTTACAGTGCATCTaGGGGACCATATTAGGATGT +
Preference number: 5 (lower is better)
Translates to: KPFNYAKGWPDSTHLTQAFLQCI*GTILGC
Trigger: ACATCCTAATATGGTCCCCAAGATGCACTGTAAGAA...AGCCTGGGTGAGGTGGGTTGAATCAGGCCAGCCTTTGGCATAATTGAAAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CAA 90 bp AAATCAATCCATTCAGGGATGAAGCTAGGAATGCATACCTGCTTGTCTATCTCTCAGGTCCCCGCATACTaGCTGCAGAAGGAAAACAGC +
Preference number: 5 (lower is better)
Translates to: KSIHSGMKLGMHTCLSISQVPAY*LQKENS
Trigger: GCTGTTTTCCTTCTGCAGCAAGTATGCGGGGACCTG...AGAGATAGACAAGCAGGTATGCATTCCTAGCTTCATCCCTGAATGGATTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CAA 90 bp ATGAAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGCAGGTCCCCGCATACTaGCTGCAGAAGGAAAACAGC +
Preference number: 5 (lower is better)
Translates to: MKDFNCVTVQNIPQGNPEQVPAY*LQKENS
Trigger: GCTGTTTTCCTTCTGCAGCAAGTATGCGGGGACCTG...CTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CAA 90 bp TGCATCTTGGGGACCATATTAGGATGTCAGTTCATTGAAAGGAAGATTGAGTTTTGGCCCGAGGTGCATTaGTTCAGCTCGATGACTTCC +
Preference number: 5 (lower is better)
Translates to: CILGTILGCQFIERKIEFWPEVH*FSSMTS
Trigger: GGAAGTCATCGAGCTGAACAAATGCACCTCGGGCCA...AAACTCAATCTTCCTTTCAATGAACTGACATCCTAATATGGTCCCCAAGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350889.8
ENST00000519997.5
CDS-3UTR CAA 90 bp TGGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGAAACGCGACCTGGAAAGTTCTTaGGCCTCTAGGCTTTACCTG +
Preference number: 5 (lower is better)
Translates to: WLHWSILNMYKHQKQRKRDLESS*ASRLYL
Trigger: CAGGTAAAGCCTAGAGGCCAAAGAACTTTCCAGGTC...GCGTTTCCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp CAGACATATATGCTCCCTAAGGCAATGAAGGATTTTAATTGTGTAACTGTGCAGTCCCTGTTCTCCTTGTaGGATTCCATCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: QTYMLPKAMKDFNCVTVQSLFSL*DSIFWA
Trigger: GGCCCAGAAGATGGAATCCAACAAGGAGAACAGGGA...CTGCACAGTTACACAATTAAAATCCTTCATTGCCTTAGGGAGCATATATGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CAA 90 bp CCTTCCATCAAATCAATCCATTCAGGGATGAAGCTAGGAATGCATACCTGCTTGGGAATGCATACCTGCTaGTCTATCTCTACTCCTTTG +
Preference number: 5 (lower is better)
Translates to: PSIKSIHSGMKLGMHTCLGMHTC*SISTPL
Trigger: CAAAGGAGTAGAGATAGACAAGCAGGTATGCATTCC...CAAGCAGGTATGCATTCCTAGCTTCATCCCTGAATGGATTGATTTGATGGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CAA 90 bp ATAGGATGGCTTCACTGGTCAATTCTTAACATGTACAAACACCAAAAGCAGAGGTTCCTCAATGGCCTTTaGGATCACCTCTCTCTCATG +
Preference number: 5 (lower is better)
Translates to: IGWLHWSILNMYKHQKQRFLNGL*DHLSLM
Trigger: CATGAGAGAGAGGTGATCCAAAAGGCCATTGAGGAA...CCTCTGCTTTTGGTGTTTGTACATGTTAAGAATTGACCAGTGAAGCCATCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519997.5
ENST00000523048.5
CDS-3UTR CAA 90 bp ATGAAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGTTCCTCAATGGCCTTTaGGATCACCTCTCTCTCATG +
Preference number: 5 (lower is better)
Translates to: MKDFNCVTVQNIPQGNPEFLNGL*DHLSLM
Trigger: CATGAGAGAGAGGTGATCCAAAAGGCCATTGAGGAA...CTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CAA 90 bp ATGAAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGTCTGGTTCCTATTTCTaGCCTCTGACTTCCCTGATC +
Preference number: 5 (lower is better)
Translates to: MKDFNCVTVQNIPQGNPESGSYF*PLTSLI
Trigger: GATCAGGGAAGTCAGAGGCAAGAAATAGGAACCAGA...CTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CAA 90 bp AAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGTCTTCTGGTTCCTATTTCTaGCCTCTGACTTCCCTGATC +
Preference number: 5 (lower is better)
Translates to: KDFNCVTVQNIPQGNPESSGSYF*PLTSLI
Trigger: GATCAGGGAAGTCAGAGGCAAGAAATAGGAACCAGA...AGACTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS-3UTR CAA 90 bp AAGGATTTTAATTGTGTAACTGTGCAGAATATCCCCCAAGGAAACCCTGAGTCTACAAAAGGCAACATATaGGAAAGACCTGTGACTCAC +
Preference number: 5 (lower is better)
Translates to: KDFNCVTVQNIPQGNPESTKGNI*ERPVTH
Trigger: GTGAGTCACAGGTCTTTCCAATATGTTGCCTTTTGT...AGACTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAAATCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS-3UTR CAA 90 bp CCTTCCATCAAATCAATCCATTCAGGGATGAAGCTAGGAATGCATACCTGCTTGACACCGTTCCATTTATaGACAAAAGGCAACATATTG +
Preference number: 5 (lower is better)
Translates to: PSIKSIHSGMKLGMHTCLTPFHL*TKGNIL
Trigger: CAATATGTTGCCTTTTGTCAATAAATGGAACGGTGT...CAAGCAGGTATGCATTCCTAGCTTCATCCCTGAATGGATTGATTTGATGGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519614.5
CDS TCA 72 bp CCAGGGATGGGTCTCGCCGCCTTGGCAGGGAGGCGTTaGACTCGGGAACCCCATCAAAGGAGGGTGGCTTCA +
Preference number: 6 (lower is better)
Translates to: PGMGLAALAGRR*TREPHQRRVAS
Trigger: TGAAGCCACCCTCCTTTGATGGGGTTCCCGAGTTCAACGCCTCCCTGCCAAGGCGGCGAGACCCATCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519614.5
ENST00000519997.5
ENST00000522908.1
ENST00000523048.5
CDS CAA 72 bp TCCAGGGATGGGTCTCGCCGCCTTGGCAGGGAGGCGTaGAACTCGGGAACCCCATCAAAGGAGGGTGGCTTC +
Preference number: 6 (lower is better)
Translates to: SRDGSRRLGREA*NSGTPSKEGGF
Trigger: GAAGCCACCCTCCTTTGATGGGGTTCCCGAGTTCAACGCCTCCCTGCCAAGGCGGCGAGACCCATCCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519614.5
ENST00000519997.5
ENST00000522908.1
ENST00000523048.5
CDS TCA 72 bp GACCACTGCAGCTCAGACCCTCGGGCTCACCCGCTGTaGTTTCATCGGCACTGGGAAGGAAACTGTCTCGGG +
Preference number: 6 (lower is better)
Translates to: DHCSSDPRAHPL*FHRHWEGNCLG
Trigger: CCCGAGACAGTTTCCTTCCCAGTGCCGATGAAATCACAGCGGGTGAGCCCGAGGGTCTGAGCTGCAGTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522750.1
CDS CCA 72 bp GATGCATGCACAGAGGTGACAAGATCGAGTGCACTCTaGGGGGCGCCTGATGCAGACCTTCATGGCCTCCCC +
Preference number: 6 (lower is better)
Translates to: DACTEVTRSSAL*GAPDADLHGLP
Trigger: GGGGAGGCCATGAAGGTCTGCATCAGGCGCCCCCCAGAGTGCACTCGATCTTGTCACCTCTGTGCATGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522750.1
CDS CAA 90 bp TGGATCTCTTCCAGGGATGGGTCTCGCCGCCTTGGCAGGGAGGCGTaGAACTCGGGAACCCCATCAAAGGAGGGTGGCTTCAGGATGACT +
Preference number: 6 (lower is better)
Translates to: WISSRDGSRRLGREA*NSGTPSKEGGFRMT
Trigger: AGTCATCCTGAAGCCACCCTCCTTTGATGGGGTTCCCGAGTTCAACGCCTCCCTGCCAAGGCGGCGAGACCCATCCCTGGAAGAGATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519614.5
ENST00000519997.5
ENST00000522908.1
ENST00000523048.5
CDS CCA 72 bp GAAGGAAACTGTCTCGGGAGGAGAGATTCACGGGACTaGGGTCGGGGTGCAGGACCTATGAGGACAGGACAC +
Preference number: 6 (lower is better)
Translates to: EGNCLGRRDSRD*GRGAGPMRTGH
Trigger: GTGTCCTGTCCTCATAGGTCCTGCACCCCGACCCCAGTCCCGTGAATCTCTCCTCCCGAGACAGTTTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522750.1
CDS CCA 72 bp GGAGGCGTTGAACTCGGGAACCCCATCAAAGGAGGGTaGCTTCAGGATGACTTCAAAGGATTGGCCCGAGGT +
Preference number: 6 (lower is better)
Translates to: GGVELGNPIKGG*LQDDFKGLARG
Trigger: ACCTCGGGCCAATCCTTTGAAGTCATCCTGAAGCCACCCTCCTTTGATGGGGTTCCCGAGTTCAACGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519614.5
ENST00000519997.5
ENST00000522908.1
ENST00000523048.5
CDS CAA 90 bp TGCAGCCGTTCCAACATGGCGGCGAGGTGGGCCTCCCTGTTCTCCTaGTTGGATTCCATCTTCTGGGCCAGTTTTTCCTTAGCCATCTTG +
Preference number: 6 (lower is better)
Translates to: CSRSNMAARWASLFS*LDSIFWASFSLAIL
Trigger: CAAGATGGCTAAGGAAAAACTGGCCCAGAAGATGGAATCCAACAAGGAGAACAGGGAGGCCCACCTCGCCGCCATGTTGGAACGGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519614.5
ENST00000519997.5
ENST00000522908.1
ENST00000523048.5
CDS CAA 90 bp AGCCGTTCCAACATGGCGGCGAGGTGGGCCTCCCTGTTCTCCTTGTaGGATTCCATCTTCTGGGCCAGTTTTTCCTTAGCCATCTTGATG +
Preference number: 6 (lower is better)
Translates to: SRSNMAARWASLFSL*DSIFWASFSLAILM
Trigger: CATCAAGATGGCTAAGGAAAAACTGGCCCAGAAGATGGAATCCAACAAGGAGAACAGGGAGGCCCACCTCGCCGCCATGTTGGAACGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519614.5
ENST00000519997.5
ENST00000522908.1
ENST00000523048.5
CDS TCA 72 bp AAAGATCCTGATTTTTGCCTGAGGCTGCTTCCTCCCTaGGATGATCAGCAGGTCCCCGCATACTTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: KDPDFCLRLLPP*DDQQVPAYLLQ
Trigger: CTGCAGCAAGTATGCGGGGACCTGCTGATCATCTCAGGGAGGAAGCAGCCTCAGGCAAAAATCAGGATCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1
CDS CCA 72 bp CTCTTTGTAGGCAGCAAGGGTCATGTTTCTGGGATCTaGTGGCTGAATCTAGCTGAAAGTTACAGAGTGGGT +
Preference number: 6 (lower is better)
Translates to: LFVGSKGHVSGI*WLNLAESYRVG
Trigger: ACCCACTCTGTAACTTTCAGCTAGATTCAGCCACCAGATCCCAGAAACATGACCCTTGCTGCCTACAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265770.11
ENST00000350889.8
ENST00000519614.5
ENST00000522750.1
ENST00000522908.1
ENST00000523048.5
CDS CAA 90 bp GTGCAGAATATCCCCCAAGGAAACCCTGAGTCTGGTTCCTATTTCTaGCCTCTGACTTCCCTGATCATCCTTCGGAACTCTCTAAAGATC +
Preference number: 6 (lower is better)
Translates to: VQNIPQGNPESGSYF*PLTSLIILRNSLKI
Trigger: GATCTTTAGAGAGTTCCGAAGGATGATCAGGGAAGTCAGAGGCAAGAAATAGGAACCAGACTCAGGGTTTCCTTGGGGGATATTCTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519614.5
ENST00000522908.1