RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STK33 (Homo sapiens)

Ensembl gene IDs: ENSG00000130413

Ensembl transcript IDs: ENST00000315204.5, ENST00000358872.7, ENST00000396672.5, ENST00000418597.5, ENST00000422559.6, ENST00000431279.6, ENST00000444064.6, ENST00000447869.5, ENST00000454443.2, ENST00000457885.6, ENST00000473980.5, ENST00000486305.6, ENST00000524760.5, ENST00000526360.1, ENST00000526517.1, ENST00000532336.1, ENST00000534493.5

Found 383 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTGCTGGTGCAAACACATaGCGGGGCTCTGTGGAGCTA +
Preference number: 2 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAAAGANT*RGSVEL
Trigger: TAGCTCCACAGAGCCCCGCCATGTGTTTGCACCAGC...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
3UTR-3UTR CCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCGCTGGTGCAAACACATaGCGGGGCTCTGTGGAGCTA +
Preference number: 2 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPAGANT*RGSVEL
Trigger: TAGCTCCACAGAGCCCCGCCATGTGTTTGCACCAGC...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
3UTR-3UTR CCA 90 bp TTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCGCTTCAATTTTAAGCTaGTGCAAACACATGGCGGGG +
Preference number: 2 (lower is better)
Translates to: LISTAAHCQAYWWLSFNAASILS*CKHMAG
Trigger: CCCCGCCATGTGTTTGCACCAGCTTAAAATTGAAGC...GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
3UTR-3UTR GCA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATTCAATTTTAAGCTGGTaGAAACACATGGCGGGGCTC +
Preference number: 2 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNSILSW*KHMAGL
Trigger: GAGCCCCGCCATGTGTTTGCACCAGCTTAAAATTGA...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
3UTR-3UTR GCA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTTCAATTTTAAGCTGGTaGAAACACATGGCGGGGCTC +
Preference number: 2 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAASILSW*KHMAGL
Trigger: GAGCCCCGCCATGTGTTTGCACCAGCTTAAAATTGA...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
3UTR-3UTR CCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCCACTGCCAAGCCTACTaGTGGCTGTCCTTTAATGCC +
Preference number: 2 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPHCQAY*WLSFNA
Trigger: GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTG...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
3UTR CAA 90 bp CCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTTaGGAGATAAGCAGCTTCAATTTTAAGCTGGTGCAAACACATGGC +
Preference number: 2 (lower is better)
Translates to: PTGGCPLMPCAAYAA*EISSFNFKLVQTHG
Trigger: GCCATGTGTTTGCACCAGCTTAAAATTGAAGCTGCTTATCTCCAAAGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
3UTR-3UTR TCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCGTGTACATCTTGAGTTaGTTTCCACTGCAGCCCACT +
Preference number: 2 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPVYILS*FPLQPT
Trigger: AGTGGGCTGCAGTGGAAATCAACTCAAGATGTACAC...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
3UTR-3UTR TCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCCCTTCGTGTACATCTTaGGTTGATTTCCACTGCAGC +
Preference number: 2 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPPSCTS*VDFHCS
Trigger: GCTGCAGTGGAAATCAACTCAAGATGTACACGAAGG...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
3UTR-3UTR GCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCTCAATTTTAAGCTGGTaGAAACACATGGCGGGGCTC +
Preference number: 2 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPSILSW*KHMAGL
Trigger: GAGCCCCGCCATGTGTTTGCACCAGCTTAAAATTGA...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
3UTR-3UTR GCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCGCCATGTGCAGCTTATaGTGCTTTGGAGATAAGCAG +
Preference number: 2 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPAMCSL*CFGDKQ
Trigger: CTGCTTATCTCCAAAGCAGCATAAGCTGCACATGGC...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
3UTR-3UTR GCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCATGTGCAGCTTATGCTaGTTTGGAGATAAGCAGCTT +
Preference number: 2 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPMCSLC*FGDKQL
Trigger: AAGCTGCTTATCTCCAAAGCAGCATAAGCTGCACAT...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
3UTR-3UTR GCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCTCCTTTAATGCCATGTaGAGCTTATGCTGCTTTGGA +
Preference number: 2 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPSFNAM*SLCCFG
Trigger: TCCAAAGCAGCATAAGCTGCACATGGCATTAAAGGA...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
3UTR CCA 72 bp TTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTaGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGC +
Preference number: 3 (lower is better)
Translates to: LISTAAHCQAYW*LSFNAMCSLCC
Trigger: GCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
3UTR CCA 72 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTaGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGC +
Preference number: 3 (lower is better)
Translates to: ELISTAAHCQAY*WLSFNAMCSLC
Trigger: GCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
3UTR-3UTR CAA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCAGAGCAGCTTTGTTTTaGTACTGTCCAACACTGGAG +
Preference number: 3 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSRAALF*YCPTLE
Trigger: CTCCAGTGTTGGACAGTACAAAAACAAAGCTGCTCT...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
3UTR-3UTR CAA 90 bp TTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCAGAGCAGCTTTGTTTTaGTACTGTCCAACACTGGAG +
Preference number: 3 (lower is better)
Translates to: LISTAAHCQAYWWLSFNARAALF*YCPTLE
Trigger: CTCCAGTGTTGGACAGTACAAAAACAAAGCTGCTCT...GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
3UTR-3UTR CAA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCAGAGCAGCTTTGTTTTaGTACTGTCCAACACTGGAG +
Preference number: 3 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCRAALF*YCPTLE
Trigger: CTCCAGTGTTGGACAGTACAAAAACAAAGCTGCTCT...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
3UTR-3UTR CAA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCAGAGCAGCTTTGTTTTaGTACTGTCCAACACTGGAG +
Preference number: 3 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTRAALF*YCPTLE
Trigger: CTCCAGTGTTGGACAGTACAAAAACAAAGCTGCTCT...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
3UTR-3UTR CAA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTAGAGCAGCTTTGTTTTaGTACTGTCCAACACTGGAG +
Preference number: 3 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAARAALF*YCPTLE
Trigger: CTCCAGTGTTGGACAGTACAAAAACAAAGCTGCTCT...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCTCGCGGCCGGCGGACTaGCGGGTCTCCGACAGGTGC +
Preference number: 4 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTSRPAD*RVSDRC
Trigger: GCACCTGTCGGAGACCCGCCAGTCCGCCGGCCGCGA...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534493.5
CDS-3UTR TCA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCGGCGCAGGCTGTCGCTaGGCCCGGAATTCTGCACCG +
Preference number: 4 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTGAGCR*ARNSAP
Trigger: CGGTGCAGAATTCCGGGCTCAGCGACAGCCTGCGCC...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358872.7
CDS-3UTR CCA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCCGGACCCGGGGGAAATaGGGTACCAACGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCRTRGK*GTNGWA
Trigger: GGCCCAGCCGTTGGTACCCCATTTCCCCCGGGTCCG...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315204.5
ENST00000396672.5
CDS-3UTR CCA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCTGGGGTACCAACGGCTaGGCCCCAGGAGACACTCGG +
Preference number: 4 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCWGTNG*APGDTR
Trigger: CCGAGTGTCTCCTGGGGCCCAGCCGTTGGTACCCCA...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000315204.5
ENST00000396672.5
CDS-3UTR CCA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATCGGACCCGGGGGAAATaGGGTACCAACGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNRTRGK*GTNGWA
Trigger: GGCCCAGCCGTTGGTACCCCATTTCCCCCGGGTCCG...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315204.5
ENST00000396672.5
CDS-3UTR GCA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTCCACTGCAGCCCACTaGCAAGCCTACTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKSTAAH*QAYWWL
Trigger: CAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGA...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp TTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCGTGAGACGGTGGAGATaGACCGGGGCAGACAGAGAC +
Preference number: 4 (lower is better)
Translates to: LISTAAHCQAYWWLSFNAVRRWR*TGADRD
Trigger: GTCTCTGTCTGCCCCGGTTCATCTCCACCGTCTCAC...GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315204.5
ENST00000396672.5
CDS-3UTR TCA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCGTGAGACGGTGGAGATaGACCGGGGCAGACAGAGAC +
Preference number: 4 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCVRRWR*TGADRD
Trigger: GTCTCTGTCTGCCCCGGTTCATCTCCACCGTCTCAC...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315204.5
ENST00000396672.5
CDS-3UTR GCA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCTCCACTGCAGCCCACTaGCAAGCCTACTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCSTAAH*QAYWWL
Trigger: CAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGA...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp TTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCTCCACTGCAGCCCACTaGCAAGCCTACTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LISTAAHCQAYWWLSFNASTAAH*QAYWWL
Trigger: CAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGA...GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGGCTGGTGCAAACACATaGCGGGGCTCTGTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLAGANT*RGSVEL
Trigger: TAGCTCCACAGAGCCCCGCCATGTGTTTGCACCAGC...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCGCTGGTGCAAACACATaGCGGGGCTCTGTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSAGANT*RGSVEL
Trigger: TAGCTCCACAGAGCCCCGCCATGTGTTTGCACCAGC...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGGTCCCACATGTGGCCTaGAGCATGGCTTCACTCCTA +
Preference number: 4 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKVPHVA*SMASLL
Trigger: TAGGAGTGAAGCCATGCTGCAGGCCACATGTGGGAC...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCGTCCCACATGTGGCCTaGAGCATGGCTTCACTCCTA +
Preference number: 4 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSVPHVA*SMASLL
Trigger: TAGGAGTGAAGCCATGCTGCAGGCCACATGTGGGAC...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTTCCACTGCAGCCCACTaGCAAGCCTACTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAASTAAH*QAYWWL
Trigger: CAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGA...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATTCCACTGCAGCCCACTaGCAAGCCTACTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNSTAAH*QAYWWL
Trigger: CAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGA...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCCGGGTCTCCGACAGGTaGGCACACTCGGCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPRVSDR*AHSAQA
Trigger: AGCCTGCGCCGAGTGTGCGCACCTGTCGGAGACCCG...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000358872.7
ENST00000534493.5
CDS-3UTR CCA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAGCTGGTGCAAACACATaGCGGGGCTCTGTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSAGANT*RGSVEL
Trigger: TAGCTCCACAGAGCCCCGCCATGTGTTTGCACCAGC...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCGCTGGTGCAAACACATaGCGGGGCTCTGTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCAGANT*RGSVEL
Trigger: TAGCTCCACAGAGCCCCGCCATGTGTTTGCACCAGC...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp TTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCGTCCCACATGTGGCCTaGAGCATGGCTTCACTCCTA +
Preference number: 4 (lower is better)
Translates to: LISTAAHCQAYWWLSFNAVPHVA*SMASLL
Trigger: TAGGAGTGAAGCCATGCTGCAGGCCACATGTGGGAC...GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCTGGGGTACCAACGGCTaGGCCCCAGGAGACACTCGG +
Preference number: 4 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPWGTNG*APGDTR
Trigger: CCGAGTGTCTCCTGGGGCCCAGCCGTTGGTACCCCA...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000315204.5
ENST00000396672.5
CDS-3UTR CCA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCTTTCACGTCCCAAGATaGGGTGAAGGTGAGACGGTG +
Preference number: 4 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSFHVPR*GEGETV
Trigger: CACCGTCTCACCTTCACCCCATCTTGGGACGTGAAA...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315204.5
ENST00000396672.5
CDS-3UTR CCA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGCACTGCCAAGCCTACTaGTGGCTGTCCTTTAATGCC +
Preference number: 4 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKHCQAY*WLSFNA
Trigger: GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTG...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGCACTGCCAAGCCTACTaGTGGCTGTCCTTTAATGCC +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLHCQAY*WLSFNA
Trigger: GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTG...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCTGCCACACAGATCACTaGAGGTGGCACCAGAGAACT +
Preference number: 4 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTCHTDH*RWHQRT
Trigger: AGTTCTCTGGTGCCACCTTCAGTGATCTGTGTGGCA...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315204.5
CDS-3UTR GCA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGTCCCACATGTGGCCTaGAGCATGGCTTCACTCCTA +
Preference number: 4 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNVPHVA*SMASLL
Trigger: TAGGAGTGAAGCCATGCTGCAGGCCACATGTGGGAC...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGAGCAGGGTACTTGGTTaGTGTTCCTTGGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLSRVLG*CSLAWS
Trigger: ACTCCAAGCCAAGGAACAGCAACCAAGTACCCTGCT...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGAGCAGGGTACTTGGTTaGTGTTCCTTGGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKSRVLG*CSLAWS
Trigger: ACTCCAAGCCAAGGAACAGCAACCAAGTACCCTGCT...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCTGAGCCCGGAATTCTaGACCGGGAGAAACTTTTCA +
Preference number: 4 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSLSPEF*TGRNFS
Trigger: TGAAAAGTTTCTCCCGGTGCAGAATTCCGGGCTCAG...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358872.7
CDS-3UTR CCA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCTGTTCCTTGGCTTaGAGTCACAGGGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKCCSLA*SHRGFL
Trigger: GAGAAAACCCCTGTGACTCCAAGCCAAGGAACAGCA...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTGCTGTTCCTTGGCTTaGAGTCACAGGGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLCCSLA*SHRGFL
Trigger: GAGAAAACCCCTGTGACTCCAAGCCAAGGAACAGCA...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTTGGTTGCTGTTCCTTaGCTTGGAGTCACAGGGGTT +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLLVAVP*LGVTGV
Trigger: AACCCCTGTGACTCCAAGCCAAGGAACAGCAACCAA...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCTTGGTTGCTGTTCCTTaGCTTGGAGTCACAGGGGTT +
Preference number: 4 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSLVAVP*LGVTGV
Trigger: AACCCCTGTGACTCCAAGCCAAGGAACAGCAACCAA...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTTGGTTGCTGTTCCTTaGCTTGGAGTCACAGGGGTT +
Preference number: 4 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKLVAVP*LGVTGV
Trigger: AACCCCTGTGACTCCAAGCCAAGGAACAGCAACCAA...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCTTAGAGTTTCTTTTTaGTTCTGGACAGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSLRVSF*FWTGRR
Trigger: CCGGCGCCCTGTCCAGAACCAAAAAGAAACTCTAAG...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGCTTAGAGTTTCTTTTTaGTTCTGGACAGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKLRVSF*FWTGRR
Trigger: CCGGCGCCCTGTCCAGAACCAAAAAGAAACTCTAAG...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTGCCAAGCCTACTGGTaGCTGTCCTTTAATGCCATG +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLCQAYW*LSFNAM
Trigger: CATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCA...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCCAAGCCTACTGGTaGCTGTCCTTTAATGCCATG +
Preference number: 4 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKCQAYW*LSFNAM
Trigger: CATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCA...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCACTGCCAAGCCTACTaGTGGCTGTCCTTTAATGCC +
Preference number: 4 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVHCQAY*WLSFNA
Trigger: GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTG...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGGCTGATGCGAGACTTTaGATGATCCACCTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKADARL*MIHLVS
Trigger: TGAGACAAGGTGGATCATTCAAAGTCTCGCATCAGC...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGGTGTACATCTTGAGTTaGTTTCCACTGCAGCCCACT +
Preference number: 4 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKVYILS*FPLQPT
Trigger: AGTGGGCTGCAGTGGAAATCAACTCAAGATGTACAC...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCGCTTCACTCCTACTTTaGTTCTTCACCGCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSASLLL*FFTAKP
Trigger: TGGCTTAGCGGTGAAGAAGCAAAGTAGGAGTGAAGC...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGAGCAGGGTACTTGGTTaGTGTTCCTTGGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVSRVLG*CSLAWS
Trigger: ACTCCAAGCCAAGGAACAGCAACCAAGTACCCTGCT...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp TTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCAGCAGGGTACTTGGTTaGTGTTCCTTGGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LISTAAHCQAYWWLSFNASRVLG*CSLAWS
Trigger: ACTCCAAGCCAAGGAACAGCAACCAAGTACCCTGCT...GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTCAATTTTAAGCTGGTaGAAACACATGGCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKSILSW*KHMAGL
Trigger: GAGCCCCGCCATGTGTTTGCACCAGCTTAAAATTGA...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCAATTTTAAGCTGGTaGAAACACATGGCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLSILSW*KHMAGL
Trigger: GAGCCCCGCCATGTGTTTGCACCAGCTTAAAATTGA...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCGCCATGTGCAGCTTATaGTGCTTTGGAGATAAGCAG +
Preference number: 4 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSAMCSL*CFGDKQ
Trigger: CTGCTTATCTCCAAAGCAGCATAAGCTGCACATGGC...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGGCCATGTGCAGCTTATaGTGCTTTGGAGATAAGCAG +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLAMCSL*CFGDKQ
Trigger: CTGCTTATCTCCAAAGCAGCATAAGCTGCACATGGC...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGAGGACCATTGGCAGCTaGATGGTGGCAAGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVRTIGS*MVASWK
Trigger: TTTCCAACTTGCCACCATGCAGCTGCCAATGGTCCT...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447869.5
CDS-3UTR CCA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCATGTGGCCTGCAGCATaGCTTCACTCCTACTTTGCT +
Preference number: 4 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCMWPAA*LHSYFA
Trigger: AGCAAAGTAGGAGTGAAGCCATGCTGCAGGCCACAT...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGATGTGGCCTGCAGCATaGCTTCACTCCTACTTTGCT +
Preference number: 4 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVMWPAA*LHSYFA
Trigger: AGCAAAGTAGGAGTGAAGCCATGCTGCAGGCCACAT...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAATGTGGCCTGCAGCATaGCTTCACTCCTACTTTGCT +
Preference number: 4 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSMWPAA*LHSYFA
Trigger: AGCAAAGTAGGAGTGAAGCCATGCTGCAGGCCACAT...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGTGCTGTTCCTTGGCTTaGAGTCACAGGGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVCCSLA*SHRGFL
Trigger: GAGAAAACCCCTGTGACTCCAAGCCAAGGAACAGCA...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCATTGGTTGCTGTTCCTTaGCTTGGAGTCACAGGGGTT +
Preference number: 4 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSLVAVP*LGVTGV
Trigger: AACCCCTGTGACTCCAAGCCAAGGAACAGCAACCAA...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCTTAGAGTTTCTTTTTaGTTCTGGACAGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTLRVSF*FWTGRR
Trigger: CCGGCGCCCTGTCCAGAACCAAAAAGAAACTCTAAG...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCCTTAGAGTTTCTTTTTaGTTCTGGACAGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCLRVSF*FWTGRR
Trigger: CCGGCGCCCTGTCCAGAACCAAAAAGAAACTCTAAG...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCGCTTCAATTTTAAGCTaGTGCAAACACATGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSASILS*CKHMAG
Trigger: CCCCGCCATGTGTTTGCACCAGCTTAAAATTGAAGC...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp TTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCTGCCAAGCCTACTGGTaGCTGTCCTTTAATGCCATG +
Preference number: 4 (lower is better)
Translates to: LISTAAHCQAYWWLSFNACQAYW*LSFNAM
Trigger: CATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCA...GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGTGCCAAGCCTACTGGTaGCTGTCCTTTAATGCCATG +
Preference number: 4 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVCQAYW*LSFNAM
Trigger: CATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCA...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCTGCCAAGCCTACTGGTaGCTGTCCTTTAATGCCATG +
Preference number: 4 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTCQAYW*LSFNAM
Trigger: CATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCA...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATCACTGCCAAGCCTACTaGTGGCTGTCCTTTAATGCC +
Preference number: 4 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNHCQAY*WLSFNA
Trigger: GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTG...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTCACTGCCAAGCCTACTaGTGGCTGTCCTTTAATGCC +
Preference number: 4 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAAHCQAY*WLSFNA
Trigger: GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTG...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTTTCTGAGAAGCAGATaGACAGTCGGGGCATTTTGT +
Preference number: 4 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKFLRSR*TVGAFC
Trigger: ACAAAATGCCCCGACTGTTCATCTGCTTCTCAGAAA...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
CDS-3UTR TCA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCCGACCCCATTGTTGCTaGGATGCTTTTCTCTCTACA +
Preference number: 4 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCRPHCC*DAFLST
Trigger: TGTAGAGAGAAAAGCATCTCAGCAACAATGGGGTCG...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCGACCCCATTGTTGCTaGGATGCTTTTCTCTCTACA +
Preference number: 4 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTRPHCC*DAFLST
Trigger: TGTAGAGAGAAAAGCATCTCAGCAACAATGGGGTCG...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCGACCCCATTGTTGCTaGGATGCTTTTCTCTCTACA +
Preference number: 4 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVRPHCC*DAFLST
Trigger: TGTAGAGAGAAAAGCATCTCAGCAACAATGGGGTCG...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCTGTCTGTCGCTTCAATaGCTATTCCAAAGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSCLSLQ*LFQSSL
Trigger: AAGGGAGCTTTGGAATAGTCATTGAAGCGACAGACA...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAGCTGATGCGAGACTTTaGATGATCCACCTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSADARL*MIHLVS
Trigger: TGAGACAAGGTGGATCATTCAAAGTCTCGCATCAGC...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCTTCCTCCTCTTCATCTaGAGTGTAATTGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSFLLFI*SVIGIR
Trigger: CCTGATGCCAATTACACTTCAGATGAAGAGGAGGAA...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTTCCTCCTCTTCATCTaGAGTGTAATTGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLFLLFI*SVIGIR
Trigger: CCTGATGCCAATTACACTTCAGATGAAGAGGAGGAA...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTCCATTTCTCCCTTaGTTTCAGCTGGAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLSPFLP*FQLEGV
Trigger: AACTCCTTCCAGCTGAAATCAAGGGAGAAATGGAGA...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCGTGTACATCTTGAGTTaGTTTCCACTGCAGCCCACT +
Preference number: 4 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTVYILS*FPLQPT
Trigger: AGTGGGCTGCAGTGGAAATCAACTCAAGATGTACAC...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp TTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCGTGTACATCTTGAGTTaGTTTCCACTGCAGCCCACT +
Preference number: 4 (lower is better)
Translates to: LISTAAHCQAYWWLSFNAVYILS*FPLQPT
Trigger: AGTGGGCTGCAGTGGAAATCAACTCAAGATGTACAC...GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp TTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCCCTTCGTGTACATCTTaGGTTGATTTCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: LISTAAHCQAYWWLSFNAPSCTS*VDFHCS
Trigger: GCTGCAGTGGAAATCAACTCAAGATGTACACGAAGG...GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCCCTTCGTGTACATCTTaGGTTGATTTCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCPSCTS*VDFHCS
Trigger: GCTGCAGTGGAAATCAACTCAAGATGTACACGAAGG...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTCACGAACACATGTaGATGACTGAAGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLSHEHM*MTEALL
Trigger: CAGAAGTGCTTCAGTCATTCACATGTGTTCGTGAGA...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
CDS-3UTR GCA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAGCTTCACTCCTACTTTaGTTCTTCACCGCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSASLLL*FFTAKP
Trigger: TGGCTTAGCGGTGAAGAAGCAAAGTAGGAGTGAAGC...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGGCTTCACTCCTACTTTaGTTCTTCACCGCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVASLLL*FFTAKP
Trigger: TGGCTTAGCGGTGAAGAAGCAAAGTAGGAGTGAAGC...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp TTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCGCTTCACTCCTACTTTaGTTCTTCACCGCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: LISTAAHCQAYWWLSFNAASLLL*FFTAKP
Trigger: TGGCTTAGCGGTGAAGAAGCAAAGTAGGAGTGAAGC...GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCGCTTCACTCCTACTTTaGTTCTTCACCGCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCASLLL*FFTAKP
Trigger: TGGCTTAGCGGTGAAGAAGCAAAGTAGGAGTGAAGC...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGACATTACGACGCCTATaGTCCAAATGTCACACTGCT +
Preference number: 4 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKTLRRL*SKCHTA
Trigger: AGCAGTGTGACATTTGGAGCATAGGCGTCGTAATGT...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGACATTACGACGCCTATaGTCCAAATGTCACACTGCT +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLTLRRL*SKCHTA
Trigger: AGCAGTGTGACATTTGGAGCATAGGCGTCGTAATGT...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCACATTACGACGCCTATaGTCCAAATGTCACACTGCT +
Preference number: 4 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSTLRRL*SKCHTA
Trigger: AGCAGTGTGACATTTGGAGCATAGGCGTCGTAATGT...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTAGCAGGGTACTTGGTTaGTGTTCCTTGGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAASRVLG*CSLAWS
Trigger: ACTCCAAGCCAAGGAACAGCAACCAAGTACCCTGCT...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCATCAATTTTAAGCTGGTaGAAACACATGGCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSSILSW*KHMAGL
Trigger: GAGCCCCGCCATGTGTTTGCACCAGCTTAAAATTGA...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCTCAATTTTAAGCTGGTaGAAACACATGGCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTSILSW*KHMAGL
Trigger: GAGCCCCGCCATGTGTTTGCACCAGCTTAAAATTGA...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAGCCATGTGCAGCTTATaGTGCTTTGGAGATAAGCAG +
Preference number: 4 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSAMCSL*CFGDKQ
Trigger: CTGCTTATCTCCAAAGCAGCATAAGCTGCACATGGC...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTTCCACCACCAAAACTaGAGGAACCCTTGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKFHHQN*RNPCFA
Trigger: AGCAAAACAAGGGTTCCTCCAGTTTTGGTGGTGGAA...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTTCCACCACCAAAACTaGAGGAACCCTTGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLFHHQN*RNPCFA
Trigger: AGCAAAACAAGGGTTCCTCCAGTTTTGGTGGTGGAA...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATATGTGGCCTGCAGCATaGCTTCACTCCTACTTTGCT +
Preference number: 4 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNMWPAA*LHSYFA
Trigger: AGCAAAGTAGGAGTGAAGCCATGCTGCAGGCCACAT...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATTGCTGTTCCTTGGCTTaGAGTCACAGGGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNCCSLA*SHRGFL
Trigger: GAGAAAACCCCTGTGACTCCAAGCCAAGGAACAGCA...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTCTTAGAGTTTCTTTTTaGTTCTGGACAGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAALRVSF*FWTGRR
Trigger: CCGGCGCCCTGTCCAGAACCAAAAAGAAACTCTAAG...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATCTTAGAGTTTCTTTTTaGTTCTGGACAGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNLRVSF*FWTGRR
Trigger: CCGGCGCCCTGTCCAGAACCAAAAAGAAACTCTAAG...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCGCTTCAATTTTAAGCTaGTGCAAACACATGGCGGGG +
Preference number: 4 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCASILS*CKHMAG
Trigger: CCCCGCCATGTGTTTGCACCAGCTTAAAATTGAAGC...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTTGCCAAGCCTACTGGTaGCTGTCCTTTAATGCCATG +
Preference number: 4 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAACQAYW*LSFNAM
Trigger: CATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCA...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCTTTCTGAGAAGCAGATaGACAGTCGGGGCATTTTGT +
Preference number: 4 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTFLRSR*TVGAFC
Trigger: ACAAAATGCCCCGACTGTTCATCTGCTTCTCAGAAA...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
CDS-3UTR TCA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCTTTCTGAGAAGCAGATaGACAGTCGGGGCATTTTGT +
Preference number: 4 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCFLRSR*TVGAFC
Trigger: ACAAAATGCCCCGACTGTTCATCTGCTTCTCAGAAA...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
CDS-3UTR TCA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCAAAGTACATCTTTCTaGGAAGCAGATGAACAGTCG +
Preference number: 4 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSQSTSF*EADEQS
Trigger: CGACTGTTCATCTGCTTCTCAGAAAGATGTACTTTG...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
CDS-3UTR TCA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATCGACCCCATTGTTGCTaGGATGCTTTTCTCTCTACA +
Preference number: 4 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNRPHCC*DAFLST
Trigger: TGTAGAGAGAAAAGCATCTCAGCAACAATGGGGTCG...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCTGTCTGTCGCTTCAATaGCTATTCCAAAGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTCLSLQ*LFQSSL
Trigger: AAGGGAGCTTTGGAATAGTCATTGAAGCGACAGACA...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCTGATGCGAGACTTTaGATGATCCACCTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNADARL*MIHLVS
Trigger: TGAGACAAGGTGGATCATTCAAAGTCTCGCATCAGC...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGTTCCTCCTCTTCATCTaGAGTGTAATTGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVFLLFI*SVIGIR
Trigger: CCTGATGCCAATTACACTTCAGATGAAGAGGAGGAA...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCTCTCCATTTCTCCCTTaGTTTCAGCTGGAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCSPFLP*FQLEGV
Trigger: AACTCCTTCCAGCTGAAATCAAGGGAGAAATGGAGA...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTGTGTACATCTTGAGTTaGTTTCCACTGCAGCCCACT +
Preference number: 4 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAAVYILS*FPLQPT
Trigger: AGTGGGCTGCAGTGGAAATCAACTCAAGATGTACAC...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATCCTTCGTGTACATCTTaGGTTGATTTCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNPSCTS*VDFHCS
Trigger: GCTGCAGTGGAAATCAACTCAAGATGTACACGAAGG...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTCCTTCGTGTACATCTTaGGTTGATTTCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAAPSCTS*VDFHCS
Trigger: GCTGCAGTGGAAATCAACTCAAGATGTACACGAAGG...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCTCTCACGAACACATGTaGATGACTGAAGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCSHEHM*MTEALL
Trigger: CAGAAGTGCTTCAGTCATTCACATGTGTTCGTGAGA...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
CDS-3UTR TCA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCATCTCACGAACACATGTaGATGACTGAAGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSSHEHM*MTEALL
Trigger: CAGAAGTGCTTCAGTCATTCACATGTGTTCGTGAGA...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
CDS-3UTR TCA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTACACATATTCACACGTaGGAGCCCACAGTAAGTTCG +
Preference number: 4 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAATHIHT*EPTVSS
Trigger: CGAACTTACTGTGGGCTCTCACGTGTGAATATGTGT...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396672.5
CDS-3UTR GCA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGACATTACGACGCCTATaGTCCAAATGTCACACTGCT +
Preference number: 4 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVTLRRL*SKCHTA
Trigger: AGCAGTGTGACATTTGGAGCATAGGCGTCGTAATGT...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCATGTGCAGCTTATGCTaGTTTGGAGATAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSMCSLC*FGDKQL
Trigger: AAGCTGCTTATCTCCAAAGCAGCATAAGCTGCACAT...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGATGTGCAGCTTATGCTaGTTTGGAGATAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLMCSLC*FGDKQL
Trigger: AAGCTGCTTATCTCCAAAGCAGCATAAGCTGCACAT...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTGCCATGTGCAGCTTATaGTGCTTTGGAGATAAGCAG +
Preference number: 4 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAAAMCSL*CFGDKQ
Trigger: CTGCTTATCTCCAAAGCAGCATAAGCTGCACATGGC...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCTCCTTTAATGCCATGTaGAGCTTATGCTGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSSFNAM*SLCCFG
Trigger: TCCAAAGCAGCATAAGCTGCACATGGCATTAAAGGA...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCCTTTAATGCCATGTaGAGCTTATGCTGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLSFNAM*SLCCFG
Trigger: TCCAAAGCAGCATAAGCTGCACATGGCATTAAAGGA...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCATTCCACCACCAAAACTaGAGGAACCCTTGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSFHHQN*RNPCFA
Trigger: AGCAAAACAAGGGTTCCTCCAGTTTTGGTGGTGGAA...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTCCCTTGATTTCAGCTaGAAGGAGTTTGCTAGATGT +
Preference number: 4 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKSLDFS*KEFARC
Trigger: ACATCTAGCAAACTCCTTCCAGCTGAAATCAAGGGA...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCCCTTGATTTCAGCTaGAAGGAGTTTGCTAGATGT +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLSLDFS*KEFARC
Trigger: ACATCTAGCAAACTCCTTCCAGCTGAAATCAAGGGA...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCTTCAATTTTAAGCTaGTGCAAACACATGGCGGGG +
Preference number: 4 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNASILS*CKHMAG
Trigger: CCCCGCCATGTGTTTGCACCAGCTTAAAATTGAAGC...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGGTAATTTCGAACTGGTaGAGTCCTCAGGTTAAGGAT +
Preference number: 4 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVVISNW*SPQVKD
Trigger: ATCCTTAACCTGAGGACTTCACCAGTTCGAAATTAC...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
CDS-3UTR TCA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCACAAAGTACATCTTTCTaGGAAGCAGATGAACAGTCG +
Preference number: 4 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSQSTSF*EADEQS
Trigger: CGACTGTTCATCTGCTTCTCAGAAAGATGTACTTTG...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
CDS-3UTR TCA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGATGCGAGACTTTGAATaGTCCACCTTGTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVMRDFE*STLSHS
Trigger: AGAATGAGACAAGGTGGATCATTCAAAGTCTCGCAT...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp TTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGCGAGACTTTGAATaGTCCACCTTGTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: LISTAAHCQAYWWLSFNAMRDFE*STLSHS
Trigger: AGAATGAGACAAGGTGGATCATTCAAAGTCTCGCAT...GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAATGCGAGACTTTGAATaGTCCACCTTGTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSMRDFE*STLSHS
Trigger: AGAATGAGACAAGGTGGATCATTCAAAGTCTCGCAT...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCATGCGAGACTTTGAATaGTCCACCTTGTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTMRDFE*STLSHS
Trigger: AGAATGAGACAAGGTGGATCATTCAAAGTCTCGCAT...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATTTCCTCCTCTTCATCTaGAGTGTAATTGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNFLLFI*SVIGIR
Trigger: CCTGATGCCAATTACACTTCAGATGAAGAGGAGGAA...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATTCTCCATTTCTCCCTTaGTTTCAGCTGGAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNSPFLP*FQLEGV
Trigger: AACTCCTTCCAGCTGAAATCAAGGGAGAAATGGAGA...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGACACATGTGAATGACTaGAGCACTTCTGCTGTAATA +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLTHVND*STSAVI
Trigger: TATTACAGCAGAAGTGCTTCAGTCATTCACATGTGT...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
CDS-3UTR TCA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTTCTCACGAACACATGTaGATGACTGAAGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAASHEHM*MTEALL
Trigger: CAGAAGTGCTTCAGTCATTCACATGTGTTCGTGAGA...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
CDS-3UTR TCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGGTGTGCGTGTGTACTTaGTCACAGTATGAAATGTAT +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLVCVCT*SQYEMY
Trigger: ATACATTTCATACTGTGATCAAGTACACACGCACAC...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447869.5
CDS-3UTR TCA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCACACATATTCACACGTaGGAGCTGCAGAAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTTHIHT*ELQKEK
Trigger: CTTTTCTTTCTGCAGCTCTCACGTGTGAATATGTGT...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447869.5
CDS-3UTR GCA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTACATTACGACGCCTATaGTCCAAATGTCACACTGCT +
Preference number: 4 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAATLRRL*SKCHTA
Trigger: AGCAGTGTGACATTTGGAGCATAGGCGTCGTAATGT...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATACATTACGACGCCTATaGTCCAAATGTCACACTGCT +
Preference number: 4 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNTLRRL*SKCHTA
Trigger: AGCAGTGTGACATTTGGAGCATAGGCGTCGTAATGT...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAATGTGCAGCTTATGCTaGTTTGGAGATAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSMCSLC*FGDKQL
Trigger: AAGCTGCTTATCTCCAAAGCAGCATAAGCTGCACAT...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCTCCTTTAATGCCATGTaGAGCTTATGCTGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCSFNAM*SLCCFG
Trigger: TCCAAAGCAGCATAAGCTGCACATGGCATTAAAGGA...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCTCCTTTAATGCCATGTaGAGCTTATGCTGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTSFNAM*SLCCFG
Trigger: TCCAAAGCAGCATAAGCTGCACATGGCATTAAAGGA...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCATCCTTTAATGCCATGTaGAGCTTATGCTGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSSFNAM*SLCCFG
Trigger: TCCAAAGCAGCATAAGCTGCACATGGCATTAAAGGA...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCTCCCTTGATTTCAGCTaGAAGGAGTTTGCTAGATGT +
Preference number: 4 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCSLDFS*KEFARC
Trigger: ACATCTAGCAAACTCCTTCCAGCTGAAATCAAGGGA...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGTCCCTTGATTTCAGCTaGAAGGAGTTTGCTAGATGT +
Preference number: 4 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVSLDFS*KEFARC
Trigger: ACATCTAGCAAACTCCTTCCAGCTGAAATCAAGGGA...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATACACATATTCACACGTaGGAGCTTAGGCAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNTHIHT*ELRQKK
Trigger: TTTCTTCTGCCTAAGCTCTCACGTGTGAATATGTGT...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315204.5
CDS-3UTR TCA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATCAAAGTACATCTTTCTaGGAAGCAGATGAACAGTCG +
Preference number: 4 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNQSTSF*EADEQS
Trigger: CGACTGTTCATCTGCTTCTCAGAAAGATGTACTTTG...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
CDS-3UTR TCA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTTCTCAATCCTTATGTaGGGAACTTTTCCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKFSILM*GTFPSV
Trigger: TACAGAAGGAAAAGTTCCTCACATAAGGATTGAGAA...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGCTTGTTCCAGATGTATaGTGTGTTCATGTTTTACAC +
Preference number: 4 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKLVPDV*CVHVLH
Trigger: GTGTAAAACATGAACACATCATACATCTGGAACAAG...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGCTTGTTCCAGATGTATaGTGTGTTCATGTTTTACAC +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLLVPDV*CVHVLH
Trigger: GTGTAAAACATGAACACATCATACATCTGGAACAAG...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGAAGATATGCTATAGCTaGTGCGAGACTTTGAATGAT +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLKICYS*CETLND
Trigger: ATCATTCAAAGTCTCGCATCAGCTATAGCATATCTT...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCGCTAGATGTGAAACTTaGACTGCACATATCAAAGTT +
Preference number: 4 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSARCET*TAHIKV
Trigger: AACTTTGATATGTGCAGTTCAAGTTTCACATCTAGC...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGGCTAGATGTGAAACTTaGACTGCACATATCAAAGTT +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLARCET*TAHIKV
Trigger: AACTTTGATATGTGCAGTTCAAGTTTCACATCTAGC...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAACACATGTGAATGACTaGAGCACTTCTGCTGTAATA +
Preference number: 4 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSTHVND*STSAVI
Trigger: TATTACAGCAGAAGTGCTTCAGTCATTCACATGTGT...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
CDS-3UTR TCA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCACACATGTGAATGACTaGAGCACTTCTGCTGTAATA +
Preference number: 4 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTTHVND*STSAVI
Trigger: TATTACAGCAGAAGTGCTTCAGTCATTCACATGTGT...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
CDS-3UTR TCA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCTGGAAAGATCTCAGTTaGGGAGGAAGAAAAATACAC +
Preference number: 4 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTWKDLS*GGRKIH
Trigger: GTGTATTTTTCTTCCTCCTCAACTGAGATCTTTCCA...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447869.5
CDS-3UTR TCA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTGGACCACAAAACTGGTaGAAAGCATGGTCTAAAACA +
Preference number: 4 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAAGPQNW*KAWSKT
Trigger: TGTTTTAGACCATGCTTTTCACCAGTTTTGTGGTCC...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447869.5
CDS-3UTR GCA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAGAGGAACCCTTGTTTTaGTGGAACATACACAAAGTA +
Preference number: 4 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSEEPLF*WNIHKV
Trigger: TACTTTGTGTATGTTCCAGCAAAACAAGGGTTCCTC...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
CDS-3UTR GCA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCGAGGAACCCTTGTTTTaGTGGAACATACACAAAGTA +
Preference number: 4 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCEEPLF*WNIHKV
Trigger: TACTTTGTGTATGTTCCAGCAAAACAAGGGTTCCTC...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
CDS-3UTR GCA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCGAGGAACCCTTGTTTTaGTGGAACATACACAAAGTA +
Preference number: 4 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTEEPLF*WNIHKV
Trigger: TACTTTGTGTATGTTCCAGCAAAACAAGGGTTCCTC...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
CDS-3UTR GCA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGATTCTGCACTACCAATaGTTGATGTCTGTGACATTT +
Preference number: 4 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLILHYQ*LMSVTF
Trigger: AAATGTCACAGACATCAAGCATTGGTAGTGCAGAAT...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCGAAGAAAGTTTATTaGCTGTTAACCACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSPKKVY*LLTTGY
Trigger: ATAACCAGTGGTTAACAGGCAATAAACTTTCTTCGG...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCAGCAGGGTACTTGGTTaGTGTTCCTTGGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPSRVLG*CSLAWS
Trigger: ACTCCAAGCCAAGGAACAGCAACCAAGTACCCTGCT...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCATGTGGCCTGCAGCATaGCTTCACTCCTACTTTGCT +
Preference number: 4 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPMWPAA*LHSYFA
Trigger: AGCAAAGTAGGAGTGAAGCCATGCTGCAGGCCACAT...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCTCATCTCTAATACATTaGTTGGTCTCACCGAAGAAA +
Preference number: 4 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSSSLIH*LVSPKK
Trigger: TTTCTTCGGTGAGACCAACCAATGTATTAGAGATGA...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTCAACTTTTCTTCAGTaGACGGCTTATTCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKSTFLQ*TAYSSL
Trigger: AAGAGAAGAATAAGCCGTCCACTGAAGAAAAGTTGA...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGCAAAGTTGTCCTTACTaGTTGCAGGAAATTGCTTTT +
Preference number: 4 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKQSCPY*LQEIAF
Trigger: AAAAGCAATTTCCTGCAACCAGTAAGGACAACTTTG...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCTCCATTACTATATTTaGCCTCTTGTTTTCCCCTAT +
Preference number: 4 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSLHYYI*PLVFPY
Trigger: ATAGGGGAAAACAAGAGGCCAAATATAGTAATGGAG...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
CDS-3UTR CCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCCCATTGGCAGCTGCATaGTGGCAAGTTGGAAAGATC +
Preference number: 4 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPPLAAA*WQVGKI
Trigger: GATCTTTCCAACTTGCCACCATGCAGCTGCCAATGG...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447869.5
CDS-3UTR TCA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGTTCTCAATCCTTATGTaGGGAACTTTTCCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVFSILM*GTFPSV
Trigger: TACAGAAGGAAAAGTTCCTCACATAAGGATTGAGAA...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCACTTGTTCCAGATGTATaGTGTGTTCATGTTTTACAC +
Preference number: 4 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSLVPDV*CVHVLH
Trigger: GTGTAAAACATGAACACATCATACATCTGGAACAAG...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCGCTGATGCGAGACTTTaGATGATCCACCTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPADARL*MIHLVS
Trigger: TGAGACAAGGTGGATCATTCAAAGTCTCGCATCAGC...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCAAGATATGCTATAGCTaGTGCGAGACTTTGAATGAT +
Preference number: 4 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCKICYS*CETLND
Trigger: ATCATTCAAAGTCTCGCATCAGCTATAGCATATCTT...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGAAGATATGCTATAGCTaGTGCGAGACTTTGAATGAT +
Preference number: 4 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVKICYS*CETLND
Trigger: ATCATTCAAAGTCTCGCATCAGCTATAGCATATCTT...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAGCTAGATGTGAAACTTaGACTGCACATATCAAAGTT +
Preference number: 4 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSARCET*TAHIKV
Trigger: AACTTTGATATGTGCAGTTCAAGTTTCACATCTAGC...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAATTCTGCACTACCAATaGTTGATGTCTGTGACATTT +
Preference number: 4 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSILHYQ*LMSVTF
Trigger: AAATGTCACAGACATCAAGCATTGGTAGTGCAGAAT...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCACCGAAGAAAGTTTATTaGCTGTTAACCACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSPKKVY*LLTTGY
Trigger: ATAACCAGTGGTTAACAGGCAATAAACTTTCTTCGG...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCGAAGAAAGTTTATTaGCTGTTAACCACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTPKKVY*LLTTGY
Trigger: ATAACCAGTGGTTAACAGGCAATAAACTTTCTTCGG...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGAGCATCTTATCAAACTaGGTAGTGGGTTATGAAATC +
Preference number: 4 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVSILSN*VVGYEI
Trigger: GATTTCATAACCCACTACGCAGTTTGATAAGATGCT...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447869.5
CDS-3UTR CCA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGTCATCTCTAATACATTaGTTGGTCTCACCGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVSSLIH*LVSPKK
Trigger: TTTCTTCGGTGAGACCAACCAATGTATTAGAGATGA...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp TTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCTCAACTTTTCTTCAGTaGACGGCTTATTCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LISTAAHCQAYWWLSFNASTFLQ*TAYSSL
Trigger: AAGAGAAGAATAAGCCGTCCACTGAAGAAAAGTTGA...GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCATCAACTTTTCTTCAGTaGACGGCTTATTCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSSTFLQ*TAYSSL
Trigger: AAGAGAAGAATAAGCCGTCCACTGAAGAAAAGTTGA...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp TTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCCAAAGTTGTCCTTACTaGTTGCAGGAAATTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LISTAAHCQAYWWLSFNAQSCPY*LQEIAF
Trigger: AAAAGCAATTTCCTGCAACCAGTAAGGACAACTTTG...GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCCAAAGTTGTCCTTACTaGTTGCAGGAAATTGCTTTT +
Preference number: 4 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCQSCPY*LQEIAF
Trigger: AAAAGCAATTTCCTGCAACCAGTAAGGACAACTTTG...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCTCCATTACTATATTTaGCCTCTTGTTTTCCCCTAT +
Preference number: 4 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTLHYYI*PLVFPY
Trigger: ATAGGGGAAAACAAGAGGCCAAATATAGTAATGGAG...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
CDS-3UTR CCA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCTCCATTACTATATTTaGCCTCTTGTTTTCCCCTAT +
Preference number: 4 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVLHYYI*PLVFPY
Trigger: ATAGGGGAAAACAAGAGGCCAAATATAGTAATGGAG...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
CDS-3UTR CCA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCACTCCATTACTATATTTaGCCTCTTGTTTTCCCCTAT +
Preference number: 4 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSLHYYI*PLVFPY
Trigger: ATAGGGGAAAACAAGAGGCCAAATATAGTAATGGAG...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
CDS-3UTR TCA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTTTCTCAATCCTTATGTaGGGAACTTTTCCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAAFSILM*GTFPSV
Trigger: TACAGAAGGAAAAGTTCCTCACATAAGGATTGAGAA...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCTGTCTGTCGCTTCAATaGCTATTCCAAAGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPCLSLQ*LFQSSL
Trigger: AAGGGAGCTTTGGAATAGTCATTGAAGCGACAGACA...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCTTCCTCCTCTTCATCTaGAGTGTAATTGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPFLLFI*SVIGIR
Trigger: CCTGATGCCAATTACACTTCAGATGAAGAGGAGGAA...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTGCTAGATGTGAAACTTaGACTGCACATATCAAAGTT +
Preference number: 4 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAAARCET*TAHIKV
Trigger: AACTTTGATATGTGCAGTTCAAGTTTCACATCTAGC...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCTAGATGTGAAACTTaGACTGCACATATCAAAGTT +
Preference number: 4 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNARCET*TAHIKV
Trigger: AACTTTGATATGTGCAGTTCAAGTTTCACATCTAGC...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCTCTCCATTTCTCCCTTaGTTTCAGCTGGAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPSPFLP*FQLEGV
Trigger: AACTCCTTCCAGCTGAAATCAAGGGAGAAATGGAGA...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCTCTCACGAACACATGTaGATGACTGAAGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPSHEHM*MTEALL
Trigger: CAGAAGTGCTTCAGTCATTCACATGTGTTCGTGAGA...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
CDS-3UTR GCA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATCCGAAGAAAGTTTATTaGCTGTTAACCACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNPKKVY*LLTTGY
Trigger: ATAACCAGTGGTTAACAGGCAATAAACTTTCTTCGG...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR GCA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTCCGAAGAAAGTTTATTaGCTGTTAACCACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAAPKKVY*LLTTGY
Trigger: ATAACCAGTGGTTAACAGGCAATAAACTTTCTTCGG...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATTCATCTCTAATACATTaGTTGGTCTCACCGAAGAAA +
Preference number: 4 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNSSLIH*LVSPKK
Trigger: TTTCTTCGGTGAGACCAACCAATGTATTAGAGATGA...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTTCATCTCTAATACATTaGTTGGTCTCACCGAAGAAA +
Preference number: 4 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAASSLIH*LVSPKK
Trigger: TTTCTTCGGTGAGACCAACCAATGTATTAGAGATGA...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTTCAACTTTTCTTCAGTaGACGGCTTATTCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAASTFLQ*TAYSSL
Trigger: AAGAGAAGAATAAGCCGTCCACTGAAGAAAAGTTGA...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCGTAGATGTTAACCACTaGTTATCTAGTAGTTCCTTA +
Preference number: 4 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTVDVNH*LSSSSL
Trigger: TAAGGAACTACTAGATAACCAGTGGTTAACATCTAC...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444064.6
CDS-3UTR CCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCTCCCTTGATTTCAGCTaGAAGGAGTTTGCTAGATGT +
Preference number: 4 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPSLDFS*KEFARC
Trigger: ACATCTAGCAAACTCCTTCCAGCTGAAATCAAGGGA...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCACACATGTGAATGACTaGAGCACTTCTGCTGTAATA +
Preference number: 4 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPTHVND*STSAVI
Trigger: TATTACAGCAGAAGTGCTTCAGTCATTCACATGTGT...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
CDS-3UTR TCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCTTCTCAATCCTTATGTaGGGAACTTTTCCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPFSILM*GTFPSV
Trigger: TACAGAAGGAAAAGTTCCTCACATAAGGATTGAGAA...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCCTTGTTCCAGATGTATaGTGTGTTCATGTTTTACAC +
Preference number: 4 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPLVPDV*CVHVLH
Trigger: GTGTAAAACATGAACACATCATACATCTGGAACAAG...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR TCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCGCTAGATGTGAAACTTaGACTGCACATATCAAAGTT +
Preference number: 4 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPARCET*TAHIKV
Trigger: AACTTTGATATGTGCAGTTCAAGTTTCACATCTAGC...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCTCATCTCTAATACATTaGTTGGTCTCACCGAAGAAA +
Preference number: 4 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPSSLIH*LVSPKK
Trigger: TTTCTTCGGTGAGACCAACCAATGTATTAGAGATGA...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CCA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCCAAAGTTGTCCTTACTaGTTGCAGGAAATTGCTTTT +
Preference number: 4 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPQSCPY*LQEIAF
Trigger: AAAAGCAATTTCCTGCAACCAGTAAGGACAACTTTG...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS CCA 90 bp AGGAGACACTCGGAGGGGTCCGCGGGCTCGGCCCGGTCCCTCCGCTaGGGGGTTACCAGCCGGCCGGCAGCGAGATACCCAGAGGCCCGT +
Preference number: 5 (lower is better)
Translates to: RRHSEGSAGSARSLR*GVTSRPAARYPEAR
Trigger: ACGGGCCTCTGGGTATCTCGCTGCCGGCCGGCTGGTAACCCCCCAGCGGAGGGACCGGGCCGAGCCCGCGGACCCCTCCGAGTGTCTCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418597.5
ENST00000532336.1
CDS GCA 90 bp GTAGTGGCCCTGCCGCGGCCGGCGGACTGGCGGGTCTCCGACAGGTaGGCACACTCGGCGCAGGCTGTCGCTGAGCCCGGAATTCTGCAC +
Preference number: 5 (lower is better)
Translates to: VVALPRPADWRVSDR*AHSAQAVAEPGILH
Trigger: GTGCAGAATTCCGGGCTCAGCGACAGCCTGCGCCGAGTGTGCGCACCTGTCGGAGACCCGCCAGTCCGCCGGCCGCGGCAGGGCCACTAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422559.6
ENST00000454443.2
CDS GCA 90 bp CAAAATCAGTCACCGCGGCCGGCGGACTGGCGGGTCTCCGACAGGTaGGCACACTCGGCGCAGGCTGTCGCTGAGCCCGGAATTCTGCAC +
Preference number: 5 (lower is better)
Translates to: QNQSPRPADWRVSDR*AHSAQAVAEPGILH
Trigger: GTGCAGAATTCCGGGCTCAGCGACAGCCTGCGCCGAGTGTGCGCACCTGTCGGAGACCCGCCAGTCCGCCGGCCGCGGTGACTGATTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526517.1
CDS CCA 90 bp TGCACCGGGAGAAACTTTTCAGCCCGCAGAGCAACCGCAGGGCAGTaGACGGGGGCCGCGCGAGGACAAACAGCGGCGGCGGGTGCAAAG +
Preference number: 5 (lower is better)
Translates to: CTGRNFSARRATAGQ*TGAARGQTAAAGAK
Trigger: CTTTGCACCCGCCGCCGCTGTTTGTCCTCGCGCGGCCCCCGTCCACTGCCCTGCGGTTGCTCTGCGGGCTGAAAAGTTTCTCCCGGTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000454443.2
ENST00000526517.1
CDS GCA 90 bp AGGTATAGATTTCCGCGGCCGGCGGACTGGCGGGTCTCCGACAGGTaGGCACACTCGGCGCAGGCTGTCGCTGAGCCCGGAATTCTGCAC +
Preference number: 5 (lower is better)
Translates to: RYRFPRPADWRVSDR*AHSAQAVAEPGILH
Trigger: GTGCAGAATTCCGGGCTCAGCGACAGCCTGCGCCGAGTGTGCGCACCTGTCGGAGACCCGCCAGTCCGCCGGCCGCGGAAATCTATACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358872.7
CDS TCA 90 bp CTGGCGGGTCTCCGACAGGTGCGCACACTCGGCGCAGGCTGTCGCTaGGCCCGGAATTCTGCACCGGGAGAAACTTTTCAGCCCGCAGAG +
Preference number: 5 (lower is better)
Translates to: LAGLRQVRTLGAGCR*ARNSAPGETFQPAE
Trigger: CTCTGCGGGCTGAAAAGTTTCTCCCGGTGCAGAATTCCGGGCTCAGCGACAGCCTGCGCCGAGTGTGCGCACCTGTCGGAGACCCGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358872.7
ENST00000454443.2
ENST00000526517.1
CDS GCA 90 bp ACAGGTGCGCACACTCGGCGCAGGCTGTCGCTGAGCCCGGAATTCTaGACCGGGAGAAACTTTTCAGCCCGCAGAGCAACCGCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: TGAHTRRRLSLSPEF*TGRNFSARRATAGQ
Trigger: CTGCCCTGCGGTTGCTCTGCGGGCTGAAAAGTTTCTCCCGGTGCAGAATTCCGGGCTCAGCGACAGCCTGCGCCGAGTGTGCGCACCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358872.7
ENST00000454443.2
ENST00000526517.1
CDS CCA 90 bp AACCCTTGTTTTGCTCTGCCACTTTCTAGTTATGTAACGTTTATCTaGCTCCCCATCGCGGCCGGCGGACTGGCGGGTCTCCGACAGGTG +
Preference number: 5 (lower is better)
Translates to: NPCFALPLSSYVTFI*LPIAAGGLAGLRQV
Trigger: CACCTGTCGGAGACCCGCCAGTCCGCCGGCCGCGATGGGGAGCCAGATAAACGTTACATAACTAGAAAGTGGCAGAGCAAAACAAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534493.5
CDS-3UTR CAA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCTTGGTTGCTGTTCCTaGGCTTGGAGTCACAGGGGT +
Preference number: 5 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSLGCCS*AWSHRG
Trigger: ACCCCTGTGACTCCAAGCCAAGGAACAGCAACCAAG...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCACTTGGTTGCTGTTCCTaGGCTTGGAGTCACAGGGGT +
Preference number: 5 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSLGCCS*AWSHRG
Trigger: ACCCCTGTGACTCCAAGCCAAGGAACAGCAACCAAG...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCTTGGTTGCTGTTCCTaGGCTTGGAGTCACAGGGGT +
Preference number: 5 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTLGCCS*AWSHRG
Trigger: ACCCCTGTGACTCCAAGCCAAGGAACAGCAACCAAG...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp TTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCCTTGGTTGCTGTTCCTaGGCTTGGAGTCACAGGGGT +
Preference number: 5 (lower is better)
Translates to: LISTAAHCQAYWWLSFNALGCCS*AWSHRG
Trigger: ACCCCTGTGACTCCAAGCCAAGGAACAGCAACCAAG...GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTTTCCTTCTGTAAAGTaGCCCCGACCCCATTGTTGC +
Preference number: 5 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLFPSVK*PRPHCC
Trigger: GCAACAATGGGGTCGGGGCAACTTTACAGAAGGAAA...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGGCTTCTCTTCTGAGCTaGCCAAAAAGGGTGGTTCTC +
Preference number: 5 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKASLLS*PKRVVL
Trigger: GAGAACCACCCTTTTTGGCAAGCTCAGAAGAGAAGC...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGGCTTCTCTTCTGAGCTaGCCAAAAAGGGTGGTTCTC +
Preference number: 5 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLASLLS*PKRVVL
Trigger: GAGAACCACCCTTTTTGGCAAGCTCAGAAGAGAAGC...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATCTTGGTTGCTGTTCCTaGGCTTGGAGTCACAGGGGT +
Preference number: 5 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNLGCCS*AWSHRG
Trigger: ACCCCTGTGACTCCAAGCCAAGGAACAGCAACCAAG...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCGTGTACATCTTGAGTaGATTTCCACTGCAGCCCAC +
Preference number: 5 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSRVHLE*ISTAAH
Trigger: GTGGGCTGCAGTGGAAATCAACTCAAGATGTACACG...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCTTTCCTTCTGTAAAGTaGCCCCGACCCCATTGTTGC +
Preference number: 5 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCFPSVK*PRPHCC
Trigger: GCAACAATGGGGTCGGGGCAACTTTACAGAAGGAAA...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCGCTTCTCTTCTGAGCTaGCCAAAAAGGGTGGTTCTC +
Preference number: 5 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTASLLS*PKRVVL
Trigger: GAGAACCACCCTTTTTGGCAAGCTCAGAAGAGAAGC...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp TTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCGCTTCTCTTCTGAGCTaGCCAAAAAGGGTGGTTCTC +
Preference number: 5 (lower is better)
Translates to: LISTAAHCQAYWWLSFNAASLLS*PKRVVL
Trigger: GAGAACCACCCTTTTTGGCAAGCTCAGAAGAGAAGC...GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGGATTTAGCAGGGTACTaGGTTGCTGTTCCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLDLAGY*VAVPWL
Trigger: AAGCCAAGGAACAGCAACCAAGTACCCTGCTAAATC...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCACGTGTACATCTTGAGTaGATTTCCACTGCAGCCCAC +
Preference number: 5 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSRVHLE*ISTAAH
Trigger: GTGGGCTGCAGTGGAAATCAACTCAAGATGTACACG...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCACTGCATGGTGGCAAGTaGGAAAGATCTCAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSLHGGK*ERSQLR
Trigger: CCTCAACTGAGATCTTTCCAACTTGCCACCATGCAG...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447869.5
CDS CCA 90 bp ATTAAGTGTCTGTGGCCTTTCCAGGTGCATGGTGCAAGCTGTCGGTaGATCTACTATTCTAGGGTCTGGAGAATGGTGGCCCTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: IKCLWPFQVHGASCR*IYYSRVWRMVALFS
Trigger: TGAGAAGAGGGCCACCATTCTCCAGACCCTAGAATAGTAGATCCACCGACAGCTTGCACCATGCACCTGGAAAGGCCACAGACACTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS-3UTR CAA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGGGAGGAACCCTTGTTTaGCTGGAACATACACAAAGT +
Preference number: 5 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLGGTLV*LEHTQS
Trigger: ACTTTGTGTATGTTCCAGCAAAACAAGGGTTCCTCC...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
CDS-3UTR CAA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGCTGCACTACCAATGCTaGATGTCTGTGACATTTCCA +
Preference number: 5 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKLHYQC*MSVTFP
Trigger: TGGAAATGTCACAGACATCAAGCATTGGTAGTGCAG...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCTGCACATATCAAAGTaGTCCTTACTGGTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSLHISK*SLLVAG
Trigger: TCCTGCAACCAGTAAGGACAACTTTGATATGTGCAG...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGCTGCACATATCAAAGTaGTCCTTACTGGTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKLHISK*SLLVAG
Trigger: TCCTGCAACCAGTAAGGACAACTTTGATATGTGCAG...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGGATTTAGCAGGGTACTaGGTTGCTGTTCCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVDLAGY*VAVPWL
Trigger: AAGCCAAGGAACAGCAACCAAGTACCCTGCTAAATC...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAGATTTAGCAGGGTACTaGGTTGCTGTTCCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSDLAGY*VAVPWL
Trigger: AAGCCAAGGAACAGCAACCAAGTACCCTGCTAAATC...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGAGAGCAGCTTTGTTTTaGTACTGTCCAACACTGGAG +
Preference number: 5 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLRAALF*YCPTLE
Trigger: CTCCAGTGTTGGACAGTACAAAAACAAAGCTGCTCT...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGGCAGCTTATGCTGCTTaGGAGATAAGCAGCTTCAAT +
Preference number: 5 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLAAYAA*EISSFN
Trigger: ATTGAAGCTGCTTATCTCCAAAGCAGCATAAGCTGC...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTCGTGTACATCTTGAGTaGATTTCCACTGCAGCCCAC +
Preference number: 5 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAARVHLE*ISTAAH
Trigger: GTGGGCTGCAGTGGAAATCAACTCAAGATGTACACG...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATCGTGTACATCTTGAGTaGATTTCCACTGCAGCCCAC +
Preference number: 5 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNRVHLE*ISTAAH
Trigger: GTGGGCTGCAGTGGAAATCAACTCAAGATGTACACG...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCAAACTGGAGGAACCCTaGTTTTGCTCTGCCACTTTC +
Preference number: 5 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTKLEEP*FCSATF
Trigger: GAAAGTGGCAGAGCAAAACAAGGGTTCCTCCAGTTT...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534493.5
CDS GCA 90 bp AAGAGGTTCTCCCTGAAGATCCTGCCCCTGCAGCAAACTACTGCCTaGGCATCCAGGCGTTTCCATATATCTTCTGAAATCTATGTGGAG +
Preference number: 5 (lower is better)
Translates to: KRFSLKILPLQQTTA*ASRRFHISSEIYVE
Trigger: CTCCACATAGATTTCAGAAGATATATGGAAACGCCTGGATGCGCAGGCAGTAGTTTGCTGCAGGGGCAGGATCTTCAGGGAGAACCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS-3UTR CAA 90 bp TTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCGGAGGAACCCTTGTTTaGCTGGAACATACACAAAGT +
Preference number: 5 (lower is better)
Translates to: LISTAAHCQAYWWLSFNAGGTLV*LEHTQS
Trigger: ACTTTGTGTATGTTCCAGCAAAACAAGGGTTCCTCC...GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
CDS-3UTR CAA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCAAACTGGAGGAACCCTaGTTTTGCTGGAACATACAC +
Preference number: 5 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTKLEEP*FCWNIH
Trigger: GTGTATGTTCCAGCAAAACAAGGGTTCCTCCAGTTT...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
CDS-3UTR CAA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCTGCACTACCAATGCTaGATGTCTGTGACATTTCCA +
Preference number: 5 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTLHYQC*MSVTFP
Trigger: TGGAAATGTCACAGACATCAAGCATTGGTAGTGCAG...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCTACATTTGAGGTTCTaGAGGGCAAATCTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVLHLRF*RANLSW
Trigger: CCAGGAAAGATTTGCCCTCAAGAACCTCAAATGTAG...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCTACATTTGAGGTTCTaGAGGGCAAATCTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTLHLRF*RANLSW
Trigger: CCAGGAAAGATTTGCCCTCAAGAACCTCAAATGTAG...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCCTACATTTGAGGTTCTaGAGGGCAAATCTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCLHLRF*RANLSW
Trigger: CCAGGAAAGATTTGCCCTCAAGAACCTCAAATGTAG...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp CGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCTCAGCTGGAAGGAGTTaGCTAGATGTGAAACTTGAA +
Preference number: 5 (lower is better)
Translates to: RGSVELKGYKLSIGLSSSSAGRS*LDVKLE
Trigger: TTCAAGTTTCACATCTAGCAAACTCCTTCCAGCTGA...GGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTCAGCTGGAAGGAGTTaGCTAGATGTGAAACTTGAA +
Preference number: 5 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKSAGRS*LDVKLE
Trigger: TTCAAGTTTCACATCTAGCAAACTCCTTCCAGCTGA...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTGATTTAGCAGGGTACTaGGTTGCTGTTCCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAADLAGY*VAVPWL
Trigger: AAGCCAAGGAACAGCAACCAAGTACCCTGCTAAATC...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAGAGCAGCTTTGTTTTaGTACTGTCCAACACTGGAG +
Preference number: 5 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSRAALF*YCPTLE
Trigger: CTCCAGTGTTGGACAGTACAAAAACAAAGCTGCTCT...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGGCAGCTTATGCTGCTTaGGAGATAAGCAGCTTCAAT +
Preference number: 5 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVAAYAA*EISSFN
Trigger: ATTGAAGCTGCTTATCTCCAAAGCAGCATAAGCTGC...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCGCAGCTTATGCTGCTTaGGAGATAAGCAGCTTCAAT +
Preference number: 5 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTAAYAA*EISSFN
Trigger: ATTGAAGCTGCTTATCTCCAAAGCAGCATAAGCTGC...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAGCAGCTTATGCTGCTTaGGAGATAAGCAGCTTCAAT +
Preference number: 5 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSAAYAA*EISSFN
Trigger: ATTGAAGCTGCTTATCTCCAAAGCAGCATAAGCTGC...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGCCTCCATTACTATATTaGGCCTCTTGTTTTCCCCTA +
Preference number: 5 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKPPLLY*ASCFPL
Trigger: TAGGGGAAAACAAGAGGCCAAATATAGTAATGGAGG...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
CDS-3UTR CAA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGCCTCCATTACTATATTaGGCCTCTTGTTTTCCCCTA +
Preference number: 5 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLPPLLY*ASCFPL
Trigger: TAGGGGAAAACAAGAGGCCAAATATAGTAATGGAGG...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
CDS-3UTR CAA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTGGAGGAACCCTTGTTTaGCTCTGCCACTTTCTAGTT +
Preference number: 5 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAAGGTLV*LCHFLV
Trigger: AACTAGAAAGTGGCAGAGCAAAACAAGGGTTCCTCC...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534493.5
CDS TCA 90 bp GTCTCTAGGGAGCTCCAAACTGTCCCACATTTTCCTGTCTTGTTCTaGGCCCTCCAAACTGTTCCAACCTCTGTCTATTACCCAGTTCCA +
Preference number: 5 (lower is better)
Translates to: VSRELQTVPHFPVLF*ALQTVPTSVYYPVP
Trigger: TGGAACTGGGTAATAGACAGAGGTTGGAACAGTTTGGAGGGCTCAGAACAAGACAGGAAAATGTGGGACAGTTTGGAGCTCCCTAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS-3UTR CAA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCAAATGTTTCCACTGTTaGAGGAAGAAAACCAGGCCA +
Preference number: 5 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTKCFHC*RKKTRP
Trigger: TGGCCTGGTTTTCTTCCTCAAACAGTGGAAACATTT...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
CDS-3UTR CAA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGGAGGAACCCTTGTTTaGCTGGAACATACACAAAGT +
Preference number: 5 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNGGTLV*LEHTQS
Trigger: ACTTTGTGTATGTTCCAGCAAAACAAGGGTTCCTCC...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
CDS-3UTR CAA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTAAACTGGAGGAACCCTaGTTTTGCTGGAACATACAC +
Preference number: 5 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAAKLEEP*FCWNIH
Trigger: GTGTATGTTCCAGCAAAACAAGGGTTCCTCCAGTTT...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
CDS-3UTR CAA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTCTGCACTACCAATGCTaGATGTCTGTGACATTTCCA +
Preference number: 5 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAALHYQC*MSVTFP
Trigger: TGGAAATGTCACAGACATCAAGCATTGGTAGTGCAG...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCTTCGTTTCTGTTTCCTaGTCTGTCGCTTCAATGACT +
Preference number: 5 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTFVSVS*SVASMT
Trigger: AGTCATTGAAGCGACAGACAAGGAAACAGAAACGAA...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTGGCGTTTCAAATACTaGTTCCAGATGTATGATGTG +
Preference number: 5 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLWRFKY*FQMYDV
Trigger: CACATCATACATCTGGAACAAGTATTTGAAACGCCA...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGACTGGTTGCAGGAAATaGCTTTTCATAAGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLTGCRK*LFISSR
Trigger: TCTACTGCTTATGAAAAGCAATTTCCTGCAACCAGT...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGACTGGTTGCAGGAAATaGCTTTTCATAAGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKTGCRK*LFISSR
Trigger: TCTACTGCTTATGAAAAGCAATTTCCTGCAACCAGT...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp AACACATGGCGGGGCTCTGTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGAGTTGTCCTTACTGGTaGCAGGAAATTGCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: NTWRGSVELKGYKLSIGLSCPYW*QEIAFH
Trigger: ATGAAAAGCAATTTCCTGCAACCAGTAAGGACAACT...CAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCACAGAGCCCCGCCATGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGAGTTGTCCTTACTGGTaGCAGGAAATTGCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: GYKLSIGLSSSPPTPSSKSCPYW*QEIAFH
Trigger: ATGAAAAGCAATTTCCTGCAACCAGTAAGGACAACT...CTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATCTGCACATATCAAAGTaGTCCTTACTGGTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNLHISK*SLLVAG
Trigger: TCCTGCAACCAGTAAGGACAACTTTGATATGTGCAG...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTCTGCACATATCAAAGTaGTCCTTACTGGTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAALHISK*SLLVAG
Trigger: TCCTGCAACCAGTAAGGACAACTTTGATATGTGCAG...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCTCAGCTGGAAGGAGTTaGCTAGATGTGAAACTTGAA +
Preference number: 5 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTSAGRS*LDVKLE
Trigger: TTCAAGTTTCACATCTAGCAAACTCCTTCCAGCTGA...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp TTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCTCAGCTGGAAGGAGTTaGCTAGATGTGAAACTTGAA +
Preference number: 5 (lower is better)
Translates to: LISTAAHCQAYWWLSFNASAGRS*LDVKLE
Trigger: TTCAAGTTTCACATCTAGCAAACTCCTTCCAGCTGA...GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCATCAGCTGGAAGGAGTTaGCTAGATGTGAAACTTGAA +
Preference number: 5 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSSAGRS*LDVKLE
Trigger: TTCAAGTTTCACATCTAGCAAACTCCTTCCAGCTGA...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCAGCTTATGCTGCTTaGGAGATAAGCAGCTTCAAT +
Preference number: 5 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNAAYAA*EISSFN
Trigger: ATTGAAGCTGCTTATCTCCAAAGCAGCATAAGCTGC...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS CCA 90 bp CTGCCTGCGCATCCAGGCGTTTCCATATATCTTCTGAAATCTATGTaGAGGTTCCCAAACCCTAATTCTTCACTTCTGTGCACTCGCAGA +
Preference number: 5 (lower is better)
Translates to: LPAHPGVSIYLLKSM*RFPNPNSSLLCTRR
Trigger: TCTGCGAGTGCACAGAAGTGAAGAATTAGGGTTTGGGAACCTCCACATAGATTTCAGAAGATATATGGAAACGCCTGGATGCGCAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS-3UTR CAA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCTTTCCTTCTGTAAAGTaGCCCCGACCCCATTGTTGC +
Preference number: 5 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPFPSVK*PRPHCC
Trigger: GCAACAATGGGGTCGGGGCAACTTTACAGAAGGAAA...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTTTCGTTTCTGTTTCCTaGTCTGTCGCTTCAATGACT +
Preference number: 5 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAAFVSVS*SVASMT
Trigger: AGTCATTGAAGCGACAGACAAGGAAACAGAAACGAA...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATTTCGTTTCTGTTTCCTaGTCTGTCGCTTCAATGACT +
Preference number: 5 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNFVSVS*SVASMT
Trigger: AGTCATTGAAGCGACAGACAAGGAAACAGAAACGAA...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCTGGCGTTTCAAATACTaGTTCCAGATGTATGATGTG +
Preference number: 5 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCWRFKY*FQMYDV
Trigger: CACATCATACATCTGGAACAAGTATTTGAAACGCCA...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCTGGCGTTTCAAATACTaGTTCCAGATGTATGATGTG +
Preference number: 5 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTWRFKY*FQMYDV
Trigger: CACATCATACATCTGGAACAAGTATTTGAAACGCCA...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGTGGCGTTTCAAATACTaGTTCCAGATGTATGATGTG +
Preference number: 5 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVWRFKY*FQMYDV
Trigger: CACATCATACATCTGGAACAAGTATTTGAAACGCCA...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCCTATCCAGAATTTCTTaGAGTTCTCCATCCTCACAA +
Preference number: 5 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCLSRIS*SSPSSQ
Trigger: TTGTGAGGATGGAGAACTCAAAGAAATTCTGGATAG...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp TTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCCTATCCAGAATTTCTTaGAGTTCTCCATCCTCACAA +
Preference number: 5 (lower is better)
Translates to: LISTAAHCQAYWWLSFNALSRIS*SSPSSQ
Trigger: TTGTGAGGATGGAGAACTCAAAGAAATTCTGGATAG...GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCTATCCAGAATTTCTTaGAGTTCTCCATCCTCACAA +
Preference number: 5 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTLSRIS*SSPSSQ
Trigger: TTGTGAGGATGGAGAACTCAAAGAAATTCTGGATAG...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCTCTCTAATACATTGGTaGGTCTCACCGAAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCSLIHW*VSPKKV
Trigger: AACTTTCTTCGGTGAGACCAACCAATGTATTAGAGA...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCTCTCTAATACATTGGTaGGTCTCACCGAAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTSLIHW*VSPKKV
Trigger: AACTTTCTTCGGTGAGACCAACCAATGTATTAGAGA...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GTGGAGCTAAAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCATCATCTCTAATACATaGGTTGGTCTCACCGAAGAA +
Preference number: 5 (lower is better)
Translates to: VELKGYKLSIGLSSSPPTIISNT*VGLTEE
Trigger: TTCTTCGGTGAGACCAACCAATGTATTAGAGATGAT...GGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTTTAGCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGATCATCTCTAATACATaGGTTGGTCTCACCGAAGAA +
Preference number: 5 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVIISNT*VGLTEE
Trigger: TTCTTCGGTGAGACCAACCAATGTATTAGAGATGAT...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGACTGGTTGCAGGAAATaGCTTTTCATAAGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVTGCRK*LFISSR
Trigger: TCTACTGCTTATGAAAAGCAATTTCCTGCAACCAGT...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAACTGGTTGCAGGAAATaGCTTTTCATAAGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSTGCRK*LFISSR
Trigger: TCTACTGCTTATGAAAAGCAATTTCCTGCAACCAGT...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCACTGGTTGCAGGAAATaGCTTTTCATAAGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCTGCRK*LFISSR
Trigger: TCTACTGCTTATGAAAAGCAATTTCCTGCAACCAGT...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp TACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGCAGTTGTCCTTACTGGTaGCAGGAAATTGCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: YKLSIGLSSSPPTPSSKCSCPYW*QEIAFH
Trigger: ATGAAAAGCAATTTCCTGCAACCAGTAAGGACAACT...GCACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTCCTCCATTACTATATTaGGCCTCTTGTTTTCCCCTA +
Preference number: 5 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAAPPLLY*ASCFPL
Trigger: TAGGGGAAAACAAGAGGCCAAATATAGTAATGGAGG...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
CDS-3UTR CAA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTCTATCCAGAATTTCTTaGAGTTCTCCATCCTCACAA +
Preference number: 5 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAALSRIS*SSPSSQ
Trigger: TTGTGAGGATGGAGAACTCAAAGAAATTCTGGATAG...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATTCTCTAATACATTGGTaGGTCTCACCGAAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNSLIHW*VSPKKV
Trigger: AACTTTCTTCGGTGAGACCAACCAATGTATTAGAGA...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTTCTCTAATACATTGGTaGGTCTCACCGAAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAASLIHW*VSPKKV
Trigger: AACTTTCTTCGGTGAGACCAACCAATGTATTAGAGA...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATATCATCTCTAATACATaGGTTGGTCTCACCGAAGAA +
Preference number: 5 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNIISNT*VGLTEE
Trigger: TTCTTCGGTGAGACCAACCAATGTATTAGAGATGAT...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATAGTTGTCCTTACTGGTaGCAGGAAATTGCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNSCPYW*QEIAFH
Trigger: ATGAAAAGCAATTTCCTGCAACCAGTAAGGACAACT...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp ACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCATGTGCAGCTTATGCTGCTAGTTGTCCTTACTGGTaGCAGGAAATTGCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: TAKPTGGCPLMPCAAYAASCPYW*QEIAFH
Trigger: ATGAAAAGCAATTTCCTGCAACCAGTAAGGACAACT...AGCAGCATAAGCTGCACATGGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp TTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATGCCACTATATTTGGCCTCTaGTTTTCCCCTATAAATAGC +
Preference number: 5 (lower is better)
Translates to: LISTAAHCQAYWWLSFNATIFGL*FSPINS
Trigger: GCTATTTATAGGGGAAAACAAGAGGCCAAATATAGT...GGCATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
CDS-3UTR CAA 90 bp AAAGGCTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAACTATATTTGGCCTCTaGTTTTCCCCTATAAATAGC +
Preference number: 5 (lower is better)
Translates to: KGYKLSIGLSSSPPTPSSTIFGL*FSPINS
Trigger: GCTATTTATAGGGGAAAACAAGAGGCCAAATATAGT...TGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAGCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
CDS-3UTR CAA 90 bp CTACAAGCTCAGCATAGGGCTGTCTTCTTCCCCTCCTACCCCCTCATCAAAGTGACTATATTTGGCCTCTaGTTTTCCCCTATAAATAGC +
Preference number: 5 (lower is better)
Translates to: LQAQHRAVFFPSYPLIKVTIFGL*FSPINS
Trigger: GCTATTTATAGGGGAAAACAAGAGGCCAAATATAGT...CACTTTGATGAGGGGGTAGGAGGGGAAGAAGACAGCCCTATGCTGAGCTTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
CDS TCA 90 bp GCAGCAAACTACTGCCTGCGCATCCAGGCGTTTCCATATATCTTCTaGAATCTATGTGGAGGTTCCCAAACCCTAATTCTTCACTTCTGT +
Preference number: 5 (lower is better)
Translates to: AANYCLRIQAFPYIF*NLCGGSQTLILHFC
Trigger: ACAGAAGTGAAGAATTAGGGTTTGGGAACCTCCACATAGATTTCAGAAGATATATGGAAACGCCTGGATGCGCAGGCAGTAGTTTGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS-3UTR CAA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCCTGCACTACCAATGCTaGATGTCTGTGACATTTCCA +
Preference number: 5 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPLHYQC*MSVTFP
Trigger: TGGAAATGTCACAGACATCAAGCATTGGTAGTGCAG...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS-3UTR CAA 90 bp GAGTTGATTTCCACTGCAGCCCACTGCCAAGCCTACTGGTGGCTGTCCTTTAATACTATATTTGGCCTCTaGTTTTCCCCTATAAATAGC +
Preference number: 5 (lower is better)
Translates to: ELISTAAHCQAYWWLSFNTIFGL*FSPINS
Trigger: GCTATTTATAGGGGAAAACAAGAGGCCAAATATAGT...ATTAAAGGACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
CDS CCA 90 bp CTGAATTCCAGCTACTACCATAGCAAACAACTTAGCACTTCATCGTaGGTTATCTGTCATCTTCATGGTGGTATTGTCTCCCCAGGTGTA +
Preference number: 5 (lower is better)
Translates to: LNSSYYHSKQLSTSS*VICHLHGGIVSPGV
Trigger: TACACCTGGGGAGACAATACCACCATGAAGATGACAGATAACCCACGATGAAGTGCTAAGTTGTTTGCTATGGTAGTAGCTGGAATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532336.1
CDS-3UTR CAA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCAAATGTTTCCACTGTTaGAGGAAGAAAACCAGGCCA +
Preference number: 5 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPKCFHC*RKKTRP
Trigger: TGGCCTGGTTTTCTTCCTCAAACAGTGGAAACATTT...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000447869.5
CDS-3UTR CAA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCTTCGTTTCTGTTTCCTaGTCTGTCGCTTCAATGACT +
Preference number: 5 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPFVSVS*SVASMT
Trigger: AGTCATTGAAGCGACAGACAAGGAAACAGAAACGAA...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS GCA 90 bp CTGGCCCTTCCCAAATCACATATGTTCACATTTCAAAACCAATCATaGCTTCCCAACAGTCCCCCAAAGTCTCAACTCATTTCAGCATTA +
Preference number: 5 (lower is better)
Translates to: LALPKSHMFTFQNQS*LPNSPPKSQLISAL
Trigger: TAATGCTGAAATGAGTTGAGACTTTGGGGGACTGTTGGGAAGGCATGATTGGTTTTGAAATGTGAACATATGTGATTTGGGAAGGGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS-3UTR CAA 90 bp GAAGTAAAAATGAGCAAGTGTGCCCACAGCCTTAAATTGAAGGTATCTGCCCCCTCTCTAATACATTGGTaGGTCTCACCGAAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: EVKMSKCAHSLKLKVSAPSLIHW*VSPKKV
Trigger: AACTTTCTTCGGTGAGACCAACCAATGTATTAGAGA...GGGGGCAGATACCTTCAATTTAAGGCTGTGGGCACACTTGCTCATTTTTACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000534493.5
CDS TCA 90 bp AGAAATGCCACTCTCAAAATGCCACTCTCTCTCTCTCTGTATGTGTaGTCACTTTCACATTCACCATGTGTATTAGTCCGTTTTCACGCT +
Preference number: 5 (lower is better)
Translates to: RNATLKMPLSLSLYV*SLSHSPCVLVRFHA
Trigger: AGCGTGAAAACGGACTAATACACATGGTGAATGTGAAAGTGATCACACATACAGAGAGAGAGAGAGTGGCATTTTGAGAGTGGCATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS GCA 90 bp ACATGCCCTGGAGACATTTTTCTCATTGTCTTGGGGATTAACATTTaGCTCCTGGTTGCTTATGCAAATTTCTGCAGCCAGCTTGAATTT +
Preference number: 5 (lower is better)
Translates to: TCPGDIFLIVLGINI*LLVAYANFCSQLEF
Trigger: AAATTCAAGCTGGCTGCAGAAATTTGCATAAGCAACCAGGAGGCAAATGTTAATCCCCAAGACAATGAGAAAAATGTCTCCAGGGCATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS TCA 90 bp TTCTCCCTTGATTTCAGCTGGAAGGAGTTTGCTAGATGTGAAACTTaGACTGCACATATCAAAGTTGTCCTTACTGGTTGCAGGAAATTG +
Preference number: 5 (lower is better)
Translates to: FSLDFSWKEFARCET*TAHIKVVLTGCRKL
Trigger: CAATTTCCTGCAACCAGTAAGGACAACTTTGATATGTGCAGTTCAAGTTTCACATCTAGCAAACTCCTTCCAGCTGAAATCAAGGGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000473980.5
ENST00000486305.6
ENST00000534493.5
CDS CCA 90 bp ATTTACAAAAGAAAGAGGTTTATTGGATTTACAGTTCCACATGACTaGGGAAGCTTCACAATCATGTCAGAAGGCAAGGAGGAGCATGTC +
Preference number: 5 (lower is better)
Translates to: IYKRKRFIGFTVPHD*GSFTIMSEGKEEHV
Trigger: GACATGCTCCTCCTTGCCTTCTGACATGATTGTGAAGCTTCCCCAGTCATGTGGAACTGTAAATCCAATAAACCTCTTTCTTTTGTAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS TCA 90 bp CAGTTCCCAAGAAGTTCCTCATCTCCATCTGAAAGCACCTCAGCCTaGATTTCATCATCCATATCATTATCAGCATTTTGTTCAAAGACA +
Preference number: 5 (lower is better)
Translates to: QFPRSSSSPSESTSA*ISSSISLSAFCSKT
Trigger: TGTCTTTGAACAAAATGCTGATAATGATATGGATGATGAAATTCAGGCTGAGGTGCTTTCAGATGGAGATGAGGAACTTCTTGGGAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS TCA 90 bp TCCCTTATAAAACTGAATGCCTTTAACAGCACCCAAGTTGCCTCTTaGATGCTTTGCTGCTTAGAAATTTCTTCCACCAGATACCCTAAA +
Preference number: 5 (lower is better)
Translates to: SLIKLNAFNSTQVAS*MLCCLEISSTRYPK
Trigger: TTTAGGGTATCTGGTGGAAGAAATTTCTAAGCAGCAAAGCATTCAAGAGGCAACTTGGGTGCTGTTAAAGGCATTCAGTTTTATAAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS CCA 90 bp CACTTTCTGGGTTATTTTTCCATTCCTTCATCATCTCTAATACATTaGTTGGTCTCACCGAAGAAAGTTTATTGCCTGTTAACCACTGGT +
Preference number: 5 (lower is better)
Translates to: HFLGYFSIPSSSLIH*LVSPKKVYCLLTTG
Trigger: ACCAGTGGTTAACAGGCAATAAACTTTCTTCGGTGAGACCAACCAATGTATTAGAGATGATGAAGGAATGGAAAAATAACCCAGAAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000473980.5
ENST00000486305.6
ENST00000534493.5
CDS GCA 72 bp CTGCCGCGGCCGGCGGACTGGCGGGTCTCCGACAGGTaGGCACACTCGGCGCAGGCTGTCGCTGAGCCCGGA +
Preference number: 6 (lower is better)
Translates to: LPRPADWRVSDR*AHSAQAVAEPG
Trigger: TCCGGGCTCAGCGACAGCCTGCGCCGAGTGTGCGCACCTGTCGGAGACCCGCCAGTCCGCCGGCCGCGGCAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422559.6
ENST00000454443.2
CDS CCA 72 bp TCGGAGGGGTCCGCGGGCTCGGCCCGGTCCCTCCGCTaGGGGGTTACCAGCCGGCCGGCAGCGAGATACCCA +
Preference number: 6 (lower is better)
Translates to: SEGSAGSARSLR*GVTSRPAARYP
Trigger: TGGGTATCTCGCTGCCGGCCGGCTGGTAACCCCCCAGCGGAGGGACCGGGCCGAGCCCGCGGACCCCTCCGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418597.5
ENST00000431279.6
ENST00000532336.1
CDS GCA 72 bp TCACCGCGGCCGGCGGACTGGCGGGTCTCCGACAGGTaGGCACACTCGGCGCAGGCTGTCGCTGAGCCCGGA +
Preference number: 6 (lower is better)
Translates to: SPRPADWRVSDR*AHSAQAVAEPG
Trigger: TCCGGGCTCAGCGACAGCCTGCGCCGAGTGTGCGCACCTGTCGGAGACCCGCCAGTCCGCCGGCCGCGGTGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526517.1
CDS GCA 72 bp CCATCGCGGCCGGCGGACTGGCGGGTCTCCGACAGGTaGGCACACTCGGCGCAGGCTGTCGCTGAGCCCGGA +
Preference number: 6 (lower is better)
Translates to: PSRPADWRVSDR*AHSAQAVAEPG
Trigger: TCCGGGCTCAGCGACAGCCTGCGCCGAGTGTGCGCACCTGTCGGAGACCCGCCAGTCCGCCGGCCGCGATGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534493.5
CDS GCA 72 bp TTTCCGCGGCCGGCGGACTGGCGGGTCTCCGACAGGTaGGCACACTCGGCGCAGGCTGTCGCTGAGCCCGGA +
Preference number: 6 (lower is better)
Translates to: FPRPADWRVSDR*AHSAQAVAEPG
Trigger: TCCGGGCTCAGCGACAGCCTGCGCCGAGTGTGCGCACCTGTCGGAGACCCGCCAGTCCGCCGGCCGCGGAAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358872.7
CDS CCA 72 bp AGAAACTTTTCAGCCCGCAGAGCAACCGCAGGGCAGTaGACGGGGGCCGCGCGAGGACAAACAGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: RNFSARRATAGQ*TGAARGQTAAA
Trigger: CGCCGCCGCTGTTTGTCCTCGCGCGGCCCCCGTCCACTGCCCTGCGGTTGCTCTGCGGGCTGAAAAGTTTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000454443.2
ENST00000526517.1
CDS TCA 72 bp ATGCAGGGAGGAGATGAGCCAGAAGGCCGGATGTGCTaGGAAGTAGTGGCCCTGCCGCGGCCGGCGGACTGG +
Preference number: 6 (lower is better)
Translates to: MQGGDEPEGRMC*EVVALPRPADW
Trigger: CCAGTCCGCCGGCCGCGGCAGGGCCACTACTTCTCAGCACATCCGGCCTTCTGGCTCATCTCCTCCCTGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422559.6
ENST00000454443.2
CDS CCA 72 bp TTCTTCCAAAGGTATAGATTTCCGCGGCCGGCGGACTaGCGGGTCTCCGACAGGTGCGCACACTCGGCGCAG +
Preference number: 6 (lower is better)
Translates to: FFQRYRFPRPAD*RVSDRCAHSAQ
Trigger: CTGCGCCGAGTGTGCGCACCTGTCGGAGACCCGCCAGTCCGCCGGCCGCGGAAATCTATACCTTTGGAAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358872.7
CDS TCA 72 bp CTCCGACAGGTGCGCACACTCGGCGCAGGCTGTCGCTaGGCCCGGAATTCTGCACCGGGAGAAACTTTTCAG +
Preference number: 6 (lower is better)
Translates to: LRQVRTLGAGCR*ARNSAPGETFQ
Trigger: CTGAAAAGTTTCTCCCGGTGCAGAATTCCGGGCTCAGCGACAGCCTGCGCCGAGTGTGCGCACCTGTCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358872.7
ENST00000454443.2
ENST00000526517.1
CDS GCA 72 bp CACACTCGGCGCAGGCTGTCGCTGAGCCCGGAATTCTaGACCGGGAGAAACTTTTCAGCCCGCAGAGCAACC +
Preference number: 6 (lower is better)
Translates to: HTRRRLSLSPEF*TGRNFSARRAT
Trigger: GGTTGCTCTGCGGGCTGAAAAGTTTCTCCCGGTGCAGAATTCCGGGCTCAGCGACAGCCTGCGCCGAGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358872.7
ENST00000454443.2
ENST00000526517.1
CDS GCA 72 bp GAATGGTGGCCCTCTTCTCACAGTTCCACTAGGCAGTaGCCCAGTAGGGACTCTGTGTGGGGGCTCCCACCC +
Preference number: 6 (lower is better)
Translates to: EWWPSSHSSTRQ*PSRDSVWGLPP
Trigger: GGGTGGGAGCCCCCACACAGAGTCCCTACTGGGGCACTGCCTAGTGGAACTGTGAGAAGAGGGCCACCATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS CCA 72 bp CTTGCACCCTCTGAGGCCATGGCCCGAGCTCTATGTTaGGCCCTTTCAGCCATGGCTGGAGTGGCTAGGATG +
Preference number: 6 (lower is better)
Translates to: LAPSEAMARALC*ALSAMAGVARM
Trigger: CATCCTAGCCACTCCAGCCATGGCTGAAAGGGCCCAACATAGAGCTCGGGCCATGGCCTCAGAGGGTGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS GCA 72 bp GGAATTTACCCTGGAGTGGGGAGGGGCGTAGTGAGATaGAGGGAGGAGATGAGCCAGAAGGCCGGATGTGCT +
Preference number: 6 (lower is better)
Translates to: GIYPGVGRGVVR*REEMSQKAGCA
Trigger: AGCACATCCGGCCTTCTGGCTCATCTCCTCCCTGCATCTCACTACGCCCCTCCCCACTCCAGGGTAAATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526360.1
CDS TCA 72 bp TCGCAGACTCAACACCACATTAAAGCAGCCAAGGCTTaGGGCTTGCACCCTCTGAGGCCATGGCCCGAGCTC +
Preference number: 6 (lower is better)
Translates to: SQTQHHIKAAKA*GLHPLRPWPEL
Trigger: GAGCTCGGGCCATGGCCTCAGAGGGTGCAAGCCTCAAGCCTTGGCTGCTTTAATGTGGTGTTGAGTCTGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS TCA 72 bp ACATTAAAGCAGCCAAGGCTTGAGGCTTGCACCCTCTaGGGCCATGGCCCGAGCTCTATGTTGGGCCCTTTC +
Preference number: 6 (lower is better)
Translates to: TLKQPRLEACTL*GHGPSSMLGPF
Trigger: GAAAGGGCCCAACATAGAGCTCGGGCCATGGCCTCAGAGGGTGCAAGCCTCAAGCCTTGGCTGCTTTAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS TCA 72 bp ATTTCCCTTCTGCACTGCCCTAGAAGAGGTTCTCCCTaGAGATCCTGCCCCTGCAGCAAACTACTGCCTGCG +
Preference number: 6 (lower is better)
Translates to: ISLLHCPRRGSP*RSCPCSKLLPA
Trigger: CGCAGGCAGTAGTTTGCTGCAGGGGCAGGATCTTCAGGGAGAACCTCTTCTAGGGCAGTGCAGAAGGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS GCA 72 bp ACTCTGTGTGGGGGCTCCCACCCCATATTTCCCTTCTaGACTGCCCTAGAAGAGGTTCTCCCTGAAGATCCT +
Preference number: 6 (lower is better)
Translates to: TLCGGSHPIFPF*TALEEVLPEDP
Trigger: AGGATCTTCAGGGAGAACCTCTTCTAGGGCAGTGCAGAAGGGAAATATGGGGTGGGAGCCCCCACACAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS CCA 72 bp CCCAGCCCACGAAACCACTTTTTCCTCCTAGTACTCTaGGTAATGGGAGGGGCTGCTGTGAAGACCTCTGAC +
Preference number: 6 (lower is better)
Translates to: PSPRNHFFLLVL*VMGGAAVKTSD
Trigger: GTCAGAGGTCTTCACAGCAGCCCCTCCCATTACCCAGAGTACTAGGAGGAAAAAGTGGTTTCGTGGGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS CCA 72 bp GTCGGTGGATCTACTATTCTAGGGTCTGGAGAATGGTaGCCCTCTTCTCACAGTTCCACTAGGCAGTGCCCC +
Preference number: 6 (lower is better)
Translates to: VGGSTILGSGEW*PSSHSSTRQCP
Trigger: GGGGCACTGCCTAGTGGAACTGTGAGAAGAGGGCCACCATTCTCCAGACCCTAGAATAGTAGATCCACCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS TCA 72 bp GATGCAGGGCACCAAGTCTCTAGACTGCACACAGCATaGGAATCCTGGGCCCAGCCCACGAAACCACTTTTT +
Preference number: 6 (lower is better)
Translates to: DAGHQVSRLHTA*ESWAQPTKPLF
Trigger: AAAAAGTGGTTTCGTGGGCTGGGCCCAGGATTCTCATGCTGTGTGCAGTCTAGAGACTTGGTGCCCTGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS TCA 72 bp ATGCAGGGAGGAGATGAGCCAGAAGGCCGGATGTGCTaGGAAGTAGTGGCCCTGCCTTCACGTTCATTTGTT +
Preference number: 6 (lower is better)
Translates to: MQGGDEPEGRMC*EVVALPSRSFV
Trigger: AACAAATGAACGTGAAGGCAGGGCCACTACTTCTCAGCACATCCGGCCTTCTGGCTCATCTCCTCCCTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526360.1
CDS GCA 72 bp CCCTGTAGCTTTGCAAGGTACAGCCTCCCTCCTGGCTaGTTTCACAGGCTGACATTAAGTGTCTGTGGCCTT +
Preference number: 6 (lower is better)
Translates to: PCSFARYSLPPG*FHRLTLSVCGL
Trigger: AAGGCCACAGACACTTAATGTCAGCCTGTGAAAGCAGCCAGGAGGGAGGCTGTACCTTGCAAAGCTACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS CCA 72 bp GCTGTCGGTGGATCTACTATTCTAGGGTCTGGAGAATaGTGGCCCTCTTCTCACAGTTCCACTAGGCAGTGC +
Preference number: 6 (lower is better)
Translates to: AVGGSTILGSGE*WPSSHSSTRQC
Trigger: GCACTGCCTAGTGGAACTGTGAGAAGAGGGCCACCATTCTCCAGACCCTAGAATAGTAGATCCACCGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS GCA 72 bp TCCCTGAAGATCCTGCCCCTGCAGCAAACTACTGCCTaGGCATCCAGGCGTTTCCATATATCTTCTGAAATC +
Preference number: 6 (lower is better)
Translates to: SLKILPLQQTTA*ASRRFHISSEI
Trigger: GATTTCAGAAGATATATGGAAACGCCTGGATGCGCAGGCAGTAGTTTGCTGCAGGGGCAGGATCTTCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS TCA 72 bp CCAGCCTCAATAGCAGCTCCATTCTCAATCCTTATGTaGGGAACTTTTCCTTCTGTAAAGTTGCCCCGACCC +
Preference number: 6 (lower is better)
Translates to: PASIAAPFSILM*GTFPSVKLPRP
Trigger: GGGTCGGGGCAACTTTACAGAAGGAAAAGTTCCTCACATAAGGATTGAGAATGGAGCTGCTATTGAGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524760.5
CDS GCA 72 bp GTTCTCCACGTAATAACATGTACATTACGACGCCTATaGTCCAAATGTCACACTGCTGGCTATAGTCGTGGG +
Preference number: 6 (lower is better)
Translates to: VLHVITCTLRRL*SKCHTAGYSRG
Trigger: CCCACGACTATAGCCAGCAGTGTGACATTTGGAGCATAGGCGTCGTAATGTACATGTTATTACGTGGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000444064.6
ENST00000447869.5
ENST00000486305.6
ENST00000526517.1
ENST00000534493.5
CDS CCA 72 bp TTCAATCATCTCCCAGTGGTTCCCTCCCATGACACATaGGAATTATGGGAGCTACAAGGTGAAATTTGGGTG +
Preference number: 6 (lower is better)
Translates to: FNHLPVVPSHDT*ELWELQGEIWV
Trigger: CACCCAAATTTCACCTTGTAGCTCCCATAATTCCCATGTGTCATGGGAGGGAACCACTGGGAGATGATTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS CCA 72 bp CTACAGGACTCCCTCGTTCCTCCACCAACAATCCCCTaGGTTAAGTTATTACCCATCCAAACTTACAAACTC +
Preference number: 6 (lower is better)
Translates to: LQDSLVPPPTIP*VKLLPIQTYKL
Trigger: GAGTTTGTAAGTTTGGATGGGTAATAACTTAACCCAGGGGATTGTTGGTGGAGGAACGAGGGAGTCCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526360.1
CDS TCA 72 bp CTATCATTAGAACAACATGGAAAAGACCCACCCTTCTaGTTCAATCATCTCCCAGTGGTTCCCTCCCATGAC +
Preference number: 6 (lower is better)
Translates to: LSLEQHGKDPPF*FNHLPVVPSHD
Trigger: GTCATGGGAGGGAACCACTGGGAGATGATTGAATCAGAAGGGTGGGTCTTTTCCATGTTGTTCTAATGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS CAA 72 bp CCTCTGACATGCCCTGGAGACATTTTTCTCATTGTCTaGGGGATTAACATTTGCCTCCTGGTTGCTTATGCA +
Preference number: 6 (lower is better)
Translates to: PLTCPGDIFLIV*GINICLLVAYA
Trigger: TGCATAAGCAACCAGGAGGCAAATGTTAATCCCCAAGACAATGAGAAAAATGTCTCCAGGGCATGTCAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS TCA 72 bp ATTTCCTCAATAGCAGCTCCATTCTCAATCCTTATGTaGGGAACTTTTCCTTCTGTAAAGTTGCCCCGACCC +
Preference number: 6 (lower is better)
Translates to: ISSIAAPFSILM*GTFPSVKLPRP
Trigger: GGGTCGGGGCAACTTTACAGAAGGAAAAGTTCCTCACATAAGGATTGAGAATGGAGCTGCTATTGAGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000418597.5
ENST00000422559.6
ENST00000447869.5
ENST00000457885.6
ENST00000534493.5
CDS TCA 72 bp TTTGCTCCAGTTCCCAAGAAGTTCCTCATCTCCATCTaGAAGCACCTCAGCCTGAATTTCATCATCCATATC +
Preference number: 6 (lower is better)
Translates to: FAPVPKKFLISI*KHLSLNFIIHI
Trigger: GATATGGATGATGAAATTCAGGCTGAGGTGCTTTCAGATGGAGATGAGGAACTTCTTGGGAACTGGAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS TCA 72 bp TACTGCCTGCGCATCCAGGCGTTTCCATATATCTTCTaGAATCTATGTGGAGGTTCCCAAACCCTAATTCTT +
Preference number: 6 (lower is better)
Translates to: YCLRIQAFPYIF*NLCGGSQTLIL
Trigger: AAGAATTAGGGTTTGGGAACCTCCACATAGATTTCAGAAGATATATGGAAACGCCTGGATGCGCAGGCAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS GCA 72 bp CCAGTTGCTTTAGTAAAACGTAACAAGAGTCACCTTTaGTCCAGTTCCCAAGAAGTTCCTCATCTCCATCTG +
Preference number: 6 (lower is better)
Translates to: PVALVKRNKSHL*SSSQEVPHLHL
Trigger: CAGATGGAGATGAGGAACTTCTTGGGAACTGGAGCAAAGGTGACTCTTGTTACGTTTTACTAAAGCAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS CAA 90 bp TGCTTGATGTCTGTGACATTTCCACCACCAAAACTGGAGGAACCCTaGTTTTGCTGGAACATACACAAAGTACATCTTTCTGAGAAGCAG +
Preference number: 6 (lower is better)
Translates to: CLMSVTFPPPKLEEP*FCWNIHKVHLSEKQ
Trigger: CTGCTTCTCAGAAAGATGTACTTTGTGTATGTTCCAGCAAAACAAGGGTTCCTCCAGTTTTGGTGGTGGAAATGTCACAGACATCAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000431279.6
ENST00000447869.5
ENST00000457885.6
ENST00000532336.1
CDS GCA 72 bp GGAGACATTTTTCTCATTGTCTTGGGGATTAACATTTaGCTCCTGGTTGCTTATGCAAATTTCTGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: GDIFLIVLGINI*LLVAYANFCSQ
Trigger: CTGGCTGCAGAAATTTGCATAAGCAACCAGGAGGCAAATGTTAATCCCCAAGACAATGAGAAAAATGTCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS CCA 72 bp CATCCAGGCGTTTCCATATATCTTCTGAAATCTATGTaGAGGTTCCCAAACCCTAATTCTTCACTTCTGTGC +
Preference number: 6 (lower is better)
Translates to: HPGVSIYLLKSM*RFPNPNSSLLC
Trigger: GCACAGAAGTGAAGAATTAGGGTTTGGGAACCTCCACATAGATTTCAGAAGATATATGGAAACGCCTGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS CCA 72 bp AGAAAGAGGTTTATTGGATTTACAGTTCCACATGACTaGGGAAGCTTCACAATCATGTCAGAAGGCAAGGAG +
Preference number: 6 (lower is better)
Translates to: RKRFIGFTVPHD*GSFTIMSEGKE
Trigger: CTCCTTGCCTTCTGACATGATTGTGAAGCTTCCCCAGTCATGTGGAACTGTAAATCCAATAAACCTCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS CCA 72 bp AGCTACTACCATAGCAAACAACTTAGCACTTCATCGTaGGTTATCTGTCATCTTCATGGTGGTATTGTCTCC +
Preference number: 6 (lower is better)
Translates to: SYYHSKQLSTSS*VICHLHGGIVS
Trigger: GGAGACAATACCACCATGAAGATGACAGATAACCCACGATGAAGTGCTAAGTTGTTTGCTATGGTAGTAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532336.1
CDS TCA 72 bp ACTCTCAAAATGCCACTCTCTCTCTCTCTGTATGTGTaGTCACTTTCACATTCACCATGTGTATTAGTCCGT +
Preference number: 6 (lower is better)
Translates to: TLKMPLSLSLYV*SLSHSPCVLVR
Trigger: ACGGACTAATACACATGGTGAATGTGAAAGTGATCACACATACAGAGAGAGAGAGAGTGGCATTTTGAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS CAA 72 bp TCTGTGACATTTCCACCACCAAAACTGGAGGAACCCTaGTTTTGCTGGAACATACACAAAGTACATCTTTCT +
Preference number: 6 (lower is better)
Translates to: SVTFPPPKLEEP*FCWNIHKVHLS
Trigger: AGAAAGATGTACTTTGTGTATGTTCCAGCAAAACAAGGGTTCCTCCAGTTTTGGTGGTGGAAATGTCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000431279.6
ENST00000447869.5
ENST00000457885.6
ENST00000532336.1
CDS CAA 72 bp TCTCCAGTGAAATTAAAGATTCTGCACTACCAATGCTaGATGTCTGTGACATTTCCACCACCAAAACTGGAG +
Preference number: 6 (lower is better)
Translates to: SPVKLKILHYQC*MSVTFPPPKLE
Trigger: CTCCAGTTTTGGTGGTGGAAATGTCACAGACATCAAGCATTGGTAGTGCAGAATCTTTAATTTCACTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315204.5
ENST00000396672.5
ENST00000418597.5
ENST00000422559.6
ENST00000431279.6
ENST00000447869.5
ENST00000457885.6
ENST00000532336.1
ENST00000534493.5
CDS CAA 72 bp TTCTCATTGTCTTGGGGATTAACATTTGCCTCCTGGTaGCTTATGCAAATTTCTGCAGCCAGCTTGAATTTC +
Preference number: 6 (lower is better)
Translates to: FSLSWGLTFASW*LMQISAASLNF
Trigger: GAAATTCAAGCTGGCTGCAGAAATTTGCATAAGCAACCAGGAGGCAAATGTTAATCCCCAAGACAATGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS GCA 72 bp ATTAACATTTGCCTCCTGGTTGCTTATGCAAATTTCTaGAGCCAGCTTGAATTTCTCCTCAGAAAATGGGAT +
Preference number: 6 (lower is better)
Translates to: INICLLVAYANF*SQLEFLLRKWD
Trigger: ATCCCATTTTCTGAGGAGAAATTCAAGCTGGCTGCAGAAATTTGCATAAGCAACCAGGAGGCAAATGTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS CCA 72 bp TTTTTCTCATTGTCTTGGGGATTAACATTTGCCTCCTaGTTGCTTATGCAAATTTCTGCAGCCAGCTTGAAT +
Preference number: 6 (lower is better)
Translates to: FFSLSWGLTFAS*LLMQISAASLN
Trigger: ATTCAAGCTGGCTGCAGAAATTTGCATAAGCAACCAGGAGGCAAATGTTAATCCCCAAGACAATGAGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS CAA 72 bp GCACATATCAAAGTTGTCCTTACTGGTTGCAGGAAATaGCTTTTCATAAGCAGTAGACTGTTTTTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: AHIKVVLTGCRK*LFISSRLFFLL
Trigger: GAGGAGGAAAAACAGTCTACTGCTTATGAAAAGCAATTTCCTGCAACCAGTAAGGACAACTTTGATATGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000473980.5
ENST00000486305.6
ENST00000534493.5
CDS CAA 90 bp ACACTTTCTGGGTTATTTTTCCATTCCTTCATCATCTCTAATACATaGGTTGGTCTCACCGAAGAAAGTTTATTGCCTGTTAACCACTGG +
Preference number: 6 (lower is better)
Translates to: TLSGLFFHSFIISNT*VGLTEESLLPVNHW
Trigger: CCAGTGGTTAACAGGCAATAAACTTTCTTCGGTGAGACCAACCAATGTATTAGAGATGATGAAGGAATGGAAAAATAACCCAGAAAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000473980.5
ENST00000486305.6
ENST00000534493.5
CDS TCA 72 bp AGAAGTTCCTCATCTCCATCTGAAAGCACCTCAGCCTaGATTTCATCATCCATATCATTATCAGCATTTTGT +
Preference number: 6 (lower is better)
Translates to: RSSSSPSESTSA*ISSSISLSAFC
Trigger: ACAAAATGCTGATAATGATATGGATGATGAAATTCAGGCTGAGGTGCTTTCAGATGGAGATGAGGAACTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486305.6
CDS CAA 90 bp TTTCTGGGTTATTTTTCCATTCCTTCATCATCTCTAATACATTGGTaGGTCTCACCGAAGAAAGTTTATTGCCTGTTAACCACTGGTTAT +
Preference number: 6 (lower is better)
Translates to: FLGYFSIPSSSLIHW*VSPKKVYCLLTTGY
Trigger: ATAACCAGTGGTTAACAGGCAATAAACTTTCTTCGGTGAGACCAACCAATGTATTAGAGATGATGAAGGAATGGAAAAATAACCCAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000473980.5
ENST00000486305.6
ENST00000534493.5
CDS CAA 72 bp TATTTTTCCATTCCTTCATCATCTCTAATACATTGGTaGGTCTCACCGAAGAAAGTTTATTGCCTGTTAACC +
Preference number: 6 (lower is better)
Translates to: YFSIPSSSLIHW*VSPKKVYCLLT
Trigger: GGTTAACAGGCAATAAACTTTCTTCGGTGAGACCAACCAATGTATTAGAGATGATGAAGGAATGGAAAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000315204.5
ENST00000358872.7
ENST00000396672.5
ENST00000447869.5
ENST00000473980.5
ENST00000486305.6
ENST00000534493.5