Pregenerated sensors for STK17A (Homo sapiens)
Ensembl gene IDs: ENSG00000164543Ensembl transcript IDs: ENST00000319357.6, ENST00000462448.1, ENST00000474211.1, ENST00000648544.1
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACCATGTTAGGGAGAGAGCTTTGTGTGACACCCTAATCAGACCGTaGAGGGACAGGTCTGAGTTGTTCATAGTGCAGAGCGAGGCATGG | + |
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Preference number: 1 (lower is better) Translates to: NHVRERALCDTLIRP*RDRSELFIVQSEAW Trigger: CCATGCCTCGCTCTGCACTATGAACAACTCAGACCTGTCCCTTCACGGTCTGATTAGGGTGTCACACAAAGCTCTCTCCCTAACATGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| 3UTR CCA 90 bp | GTAAAGGGCACTCCCAGGTGCTTTGACAGGTTCACACAGCAGGACTaGGTGAGATTACTGACTTTGTATATGTCTATGACATTTACACAC | + |
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Preference number: 1 (lower is better) Translates to: VKGTPRCFDRFTQQD*VRLLTLYMSMTFTH Trigger: GTGTGTAAATGTCATAGACATATACAAAGTCAGTAATCTCACCCAGTCCTGCTGTGTGAACCTGTCAAAGCACCTGGGAGTGCCCTTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| 3UTR-3UTR TCA 90 bp | GAGTCACTCGAGAGAATCTCTGAGTCCTGGCGAGGGCTTTCTGAGGCTTCGTGTTTTTGTTTGTGTAAGTaGTACTGGTTATCCACTTCC | + |
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Preference number: 2 (lower is better) Translates to: ESLERISESWRGLSEASCFCLCK*YWLSTS Trigger: GGAAGTGGATAACCAGTATCACTTACACAAACAAAA...ACACGAAGCCTCAGAAAGCCCTCGCCAGGACTCAGAGATTCTCTCGAGTGACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| 3UTR-3UTR TCA 90 bp | TCTCTCTCTCTCTCTCTCTCTGCTCTAGGGGATTTTACTCACTTTGGGACAAAACAGGGGTATAGAGTGTaGGAGAGAACAGATGCATGT | + |
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Preference number: 2 (lower is better) Translates to: SLSLSLSALGDFTHFGTKQGYRV*ERTDAC Trigger: ACATGCATCTGTTCTCTCTCACACTCTATACCCCTG...TTTTGTCCCAAAGTGAGTAAAATCCCCTAGAGCAGAGAGAGAGAGAGAGAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| 3UTR-3UTR TCA 90 bp | GACAGGTTCACACAGCAGGACTGGGTGAGATTACTGACTTTGTATATGTCTATGTTGATCAGATCACACTaGTACCTACAAGTGGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: DRFTQQDWVRLLTLYMSMLIRSH*YLQVAK Trigger: TTTGGCCACTTGTAGGTATCAGTGTGATCTGATCAA...CATAGACATATACAAAGTCAGTAATCTCACCCAGTCCTGCTGTGTGAACCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| 3UTR-3UTR TCA 90 bp | GACAGGTTCACACAGCAGGACTGGGTGAGATTACTGACTTTGTATATGTCTATGCATGATTTTGACAGTTaGGAAACCATGTTAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: DRFTQQDWVRLLTLYMSMHDFDS*ETMLGR Trigger: TCTCCCTAACATGGTTTCTCAACTGTCAAAATCATG...CATAGACATATACAAAGTCAGTAATCTCACCCAGTCCTGCTGTGTGAACCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| 3UTR-3UTR CCA 90 bp | GACAGGTTCACACAGCAGGACTGGGTGAGATTACTGACTTTGTATATGTCTATGTTAATTGGACTTTACTaGTCACTGTGGGGCATAGAT | + |
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Preference number: 2 (lower is better) Translates to: DRFTQQDWVRLLTLYMSMLIGLY*SLWGID Trigger: ATCTATGCCCCACAGTGACCAGTAAAGTCCAATTAA...CATAGACATATACAAAGTCAGTAATCTCACCCAGTCCTGCTGTGTGAACCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| 3UTR-3UTR TCA 90 bp | TCTCTCTCTCTCTCTCTCTCTGCTCTAGGGGATTTTACTCACTTTGGGACAAAATTTTGTTTGTGTAAGTaGTACTGGTTATCCACTTCC | + |
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Preference number: 2 (lower is better) Translates to: SLSLSLSALGDFTHFGTKFCLCK*YWLSTS Trigger: GGAAGTGGATAACCAGTATCACTTACACAAACAAAA...TTTTGTCCCAAAGTGAGTAAAATCCCCTAGAGCAGAGAGAGAGAGAGAGAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| 3UTR-3UTR CCA 90 bp | GACAGGTTCACACAGCAGGACTGGGTGAGATTACTGACTTTGTATATGTCTATGTCTTATACATCTTTTTaGGACAAAGTACCTCCTACT | + |
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Preference number: 2 (lower is better) Translates to: DRFTQQDWVRLLTLYMSMSYTSF*DKVPPT Trigger: AGTAGGAGGTACTTTGTCCCAAAAAGATGTATAAGA...CATAGACATATACAAAGTCAGTAATCTCACCCAGTCCTGCTGTGTGAACCTGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| 3UTR CAA 90 bp | TGCTTTGACAGGTTCACACAGCAGGACTGGGTGAGATTACTGACTTaGTATATGTCTATGACATTTACACACATTTGGGTATTTACTGTA | + |
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Preference number: 2 (lower is better) Translates to: CFDRFTQQDWVRLLT*YMSMTFTHIWVFTV Trigger: TACAGTAAATACCCAAATGTGTGTAAATGTCATAGACATATACAAAGTCAGTAATCTCACCCAGTCCTGCTGTGTGAACCTGTCAAAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| 3UTR CAA 90 bp | ACACAGCACACAGGTGATAGGCAAATATTTAATGCACTGAGCCTTTaGTGTGTAAGGATAATTAGTTACTTTAAGGTATTCGGCATACAC | + |
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Preference number: 2 (lower is better) Translates to: TQHTGDRQIFNALSL*CVRIISYFKVFGIH Trigger: GTGTATGCCGAATACCTTAAAGTAACTAATTATCCTTACACACAAAAGGCTCAGTGCATTAAATATTTGCCTATCACCTGTGTGCTGTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| 3UTR CCA 72 bp | TTGCCACACGAGTCACTCGAGAGAATCTCTGAGTCCTaGCGAGGGCTTTCTGAGGCTTCGTGTGTTAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: LPHESLERISES*RGLSEASCVSS Trigger: GCTGCTAACACACGAAGCCTCAGAAAGCCCTCGCCAGGACTCAGAGATTCTCTCGAGTGACTCGTGTGGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| 3UTR TCA 72 bp | AGGGAGAGAGCTTTGTGTGACACCCTAATCAGACCGTaGAGGGACAGGTCTGAGTTGTTCATAGTGCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: RERALCDTLIRP*RDRSELFIVQS Trigger: GCTCTGCACTATGAACAACTCAGACCTGTCCCTTCACGGTCTGATTAGGGTGTCACACAAAGCTCTCTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| 3UTR TCA 72 bp | CACTCTGGACCTTGTAGCTCCTCAAGCTTCCCTGTCTaGGACTCAAAACTGTGGCCATGGATATTCATTAAA | + |
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Preference number: 3 (lower is better) Translates to: HSGPCSSSSFPV*DSKLWPWIFIK Trigger: TTTAATGAATATCCATGGCCACAGTTTTGAGTCTCAGACAGGGAAGCTTGAGGAGCTACAAGGTCCAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| 3UTR CCA 72 bp | ACTCCCAGGTGCTTTGACAGGTTCACACAGCAGGACTaGGTGAGATTACTGACTTTGTATATGTCTATGACA | + |
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Preference number: 3 (lower is better) Translates to: TPRCFDRFTQQD*VRLLTLYMSMT Trigger: TGTCATAGACATATACAAAGTCAGTAATCTCACCCAGTCCTGCTGTGTGAACCTGTCAAAGCACCTGGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| 3UTR-3UTR CAA 90 bp | GACAGGTTCACACAGCAGGACTGGGTGAGATTACTGACTTTGTATATGTCTATGTTCTTATACATCTTTTaGGGACAAAGTACCTCCTAC | + |
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Preference number: 3 (lower is better) Translates to: DRFTQQDWVRLLTLYMSMFLYIF*GQSTSY Trigger: GTAGGAGGTACTTTGTCCCAAAAAGATGTATAAGAA...CATAGACATATACAAAGTCAGTAATCTCACCCAGTCCTGCTGTGTGAACCTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CCA 90 bp | CGAGGGCTTTCTGAGGCTTCGTGTGTTAGCAGCTGTTGTCTTCCAACTCAGCGGGGCCCGCTTCTTTCCTaGCCGCCTGTTCACTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: RGLSEASCVSSCCLPTQRGPLLS*PPVHSE Trigger: CTCGGAGTGAACAGGCGGCCAGGAAAGAAGCGGGCC...CCGCTGAGTTGGAAGACAACAGCTGCTAACACACGAAGCCTCAGAAAGCCCTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR TCA 90 bp | CGAGGGCTTTCTGAGGCTTCGTGTGTTAGCAGCTGTTGTCTTCCAACTCAGCGGACTCGAGAGAATCTCTaGGTCCTGGCGAGGGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: RGLSEASCVSSCCLPTQRTRENL*VLARAF Trigger: GAAAGCCCTCGCCAGGACTCAGAGATTCTCTCGAGT...CCGCTGAGTTGGAAGACAACAGCTGCTAACACACGAAGCCTCAGAAAGCCCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR GCA 90 bp | GTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCGGGAGGAGCCGCCGCTaGCTGGCTTCTCCAAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: VSDTGYPLPVHVPFGQRSGRSRR*LASPKG Trigger: TCCCTTTGGAGAAGCCAGGCAGCGGCGGCTCCTCCC...GGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS-3UTR GCA 90 bp | GTTTGTGTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGGCGCGGCGCTCGGACTaGGGCAGGCAGACTACCGGT | + |
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Preference number: 4 (lower is better) Translates to: VCVSDTGYPLPVHVPFGQARRSD*GRQTTG Trigger: ACCGGTAGTCTGCCTGCCGCAGTCCGAGCGCCGCGC...CTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTACACAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR CCA 90 bp | CGAGGGCTTTCTGAGGCTTCGTGTGTTAGCAGCTGTTGTCTTCCAACTCAGCGGAGAATCTCTGAGTCCTaGCGAGGGCTTTCTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: RGLSEASCVSSCCLPTQRRISES*RGLSEA Trigger: AGCCTCAGAAAGCCCTCGCCAGGACTCAGAGATTCT...CCGCTGAGTTGGAAGACAACAGCTGCTAACACACGAAGCCTCAGAAAGCCCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR GCA 90 bp | CCTCAAGCTTCCCTGTCTGAGACTCAAAACTGTGGCCATGGATATTCATTAAAAGGGAGGAGCCGCCGCTaGCTGGCTTCTCCAAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: PQASLSETQNCGHGYSLKGRSRR*LASPKG Trigger: TCCCTTTGGAGAAGCCAGGCAGCGGCGGCTCCTCCC...TTTTAATGAATATCCATGGCCACAGTTTTGAGTCTCAGACAGGGAAGCTTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR GCA 90 bp | GTTTGTGTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGCCTGGAAGGGCTCGGTaGGCACCACGGCGCGTATCT | + |
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Preference number: 4 (lower is better) Translates to: VCVSDTGYPLPVHVPFGQPGRAR*APRRVS Trigger: AGATACGCGCCGTGGTGCGCACCGAGCCCTTCCAGG...CTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTACACAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS-3UTR CCA 90 bp | GTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCGTGCAGAGCGAGGCATaGCCACGGTACACAGCACAC | + |
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Preference number: 4 (lower is better) Translates to: VSDTGYPLPVHVPFGQRSVQSEA*PRYTAH Trigger: GTGTGCTGTGTACCGTGGCCATGCCTCGCTCTGCAC...GGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR GCA 90 bp | TTCCAGGAAACTGTTAAATCTCCTGGTTGGCAACTTTTAAAATCTGGCTTCCACCCTGGAAGGGCTCGGTaGGCACCACGGCGCGTATCT | + |
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Preference number: 4 (lower is better) Translates to: FQETVKSPGWQLLKSGFHPGRAR*APRRVS Trigger: AGATACGCGCCGTGGTGCGCACCGAGCCCTTCCAGG...GTGGAAGCCAGATTTTAAAAGTTGCCAACCAGGAGATTTAACAGTTTCCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR GCA 90 bp | CACTCGAGAGAATCTCTGAGTCCTGGCGAGGGCTTTCTGAGGCTTCGTGTGTTAAAGGCTCTTGAATACTaGTCTGTGTCAACCAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: HSRESLSPGEGFLRLRVLKALEY*SVSTRG Trigger: ACCCCTGGTTGACACAGAGCAGTATTCAAGAGCCTT...TAACACACGAAGCCTCAGAAAGCCCTCGCCAGGACTCAGAGATTCTCTCGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR CCA 90 bp | TCTGAGGCTTCGTGTGTTAGCAGCTGTTGTCTTCCAACTCAGCGGCAGGTTTGCCTGTCTGCAACACACTaGTCAAAGATTTCACCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SEASCVSSCCLPTQRQVCLSATH*SKISPP Trigger: TGGGGGTGAAATCTTTGACCAGTGTGTTGCAGACAG...GCAAACCTGCCGCTGAGTTGGAAGACAACAGCTGCTAACACACGAAGCCTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR CCA 90 bp | CGAGGGCTTTCTGAGGCTTCGTGTGTTAGCAGCTGTTGTCTTCCAACTCAGCGGGACATTCTTCAGCAGTaGCTCGATCTTCAGGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: RGLSEASCVSSCCLPTQRDILQQ*LDLQVS Trigger: AGAAACCTGAAGATCGAGCCACTGCTGAAGAATGTC...CCGCTGAGTTGGAAGACAACAGCTGCTAACACACGAAGCCTCAGAAAGCCCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR GCA 90 bp | TCTGAGGCTTCGTGTGTTAGCAGCTGTTGTCTTCCAACTCAGCGGCAGGTTTGCTGTGTCAACCAGGGGTaGTTTAGACATTCTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SEASCVSSCCLPTQRQVCCVNQG*FRHSSA Trigger: TGCTGAAGAATGTCTAAAGCACCCCTGGTTGACACA...GCAAACCTGCCGCTGAGTTGGAAGACAACAGCTGCTAACACACGAAGCCTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR TCA 90 bp | TGTTTGCCACACGAGTCACTCGAGAGAATCTCTGAGTCCTGGCGAGGGCTTTCTGGCTTCAAATCAAGATaGACTACATCACGAGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: CLPHESLERISESWRGLSGFKSR*TTSRVC Trigger: ACACACTCGTGATGTAGTTCATCTTGATTTGAAGCC...AGAAAGCCCTCGCCAGGACTCAGAGATTCTCTCGAGTGACTCGTGTGGCAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR TCA 90 bp | TGTTTGCCACACGAGTCACTCGAGAGAATCTCTGAGTCCTGGCGAGGGCTTTCTGGATTCCTTGGTTTCTaGTTTGTCGGTATCCGAATT | + |
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Preference number: 4 (lower is better) Translates to: CLPHESLERISESWRGLSGFLGF*FVGIRI Trigger: AATTCGGATACCGACAAATCAGAAACCAAGGAATCC...AGAAAGCCCTCGCCAGGACTCAGAGATTCTCTCGAGTGACTCGTGTGGCAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR CCA 90 bp | ACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCATAAATAATGGAGCCGCCGCTGCCTaGCTTCTCCAAAGGGATCAT | + |
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Preference number: 4 (lower is better) Translates to: TGYPLPVHVPFGQRSINNGAAAA*LLQRDH Trigger: ATGATCCCTTTGGAGAAGCCAGGCAGCGGCGGCTCC...ATTATTTATGGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS-3UTR TCA 90 bp | TCTCTCTCTCTCTCTCTCTCTGCTCTAGGGGATTTTACTCACTTTGGGACAAAAACCCTAATCAGACCGTaGAGGGACAGGTCTGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: SLSLSLSALGDFTHFGTKTLIRP*RDRSEL Trigger: CAACTCAGACCTGTCCCTTCACGGTCTGATTAGGGT...TTTTGTCCCAAAGTGAGTAAAATCCCCTAGAGCAGAGAGAGAGAGAGAGAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CCA 90 bp | ACATTGAAACGGGTAACTGTACCTGTTAAATCTCCTGGTTGGCAACTTTTAAAAGGCCCGCTTCTTTCCTaGCCGCCTGTTCACTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: TLKRVTVPVKSPGWQLLKGPLLS*PPVHSE Trigger: CTCGGAGTGAACAGGCGGCCAGGAAAGAAGCGGGCC...TTTTAAAAGTTGCCAACCAGGAGATTTAACAGGTACAGTTACCCGTTTCAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR TCA 90 bp | TCTGAGGCTTCGTGTGTTAGCAGCTGTTGTCTTCCAACTCAGCGGCAGGTTTGCCGAGTGTGTAAAAAGTaGACACCTTCTAAAATCTGT | + |
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Preference number: 4 (lower is better) Translates to: SEASCVSSCCLPTQRQVCRVCKK*TPSKIC Trigger: ACAGATTTTAGAAGGTGTTCACTTTTTACACACTCG...GCAAACCTGCCGCTGAGTTGGAAGACAACAGCTGCTAACACACGAAGCCTCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR TCA 90 bp | CACTCGAGAGAATCTCTGAGTCCTGGCGAGGGCTTTCTGAGGCTTCGTGTGTTATTTTGTTTGTGTAAGTaGTACTGGTTATCCACTTCC | + |
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Preference number: 4 (lower is better) Translates to: HSRESLSPGEGFLRLRVLFCLCK*YWLSTS Trigger: GGAAGTGGATAACCAGTATCACTTACACAAACAAAA...TAACACACGAAGCCTCAGAAAGCCCTCGCCAGGACTCAGAGATTCTCTCGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR TCA 90 bp | GTTTGTGTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGGGAGAGAGCTTTGTGTaGCACCCTAATCAGACCGTG | + |
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Preference number: 4 (lower is better) Translates to: VCVSDTGYPLPVHVPFGQGESFV*HPNQTV Trigger: CACGGTCTGATTAGGGTGTCACACAAAGCTCTCTCC...CTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTACACAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR GCA 90 bp | GTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCAAGGCTCTTGAATACTaGTCTGTGTCAACCAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: VSDTGYPLPVHVPFGQRSKALEY*SVSTRG Trigger: ACCCCTGGTTGACACAGAGCAGTATTCAAGAGCCTT...GGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS-3UTR GCA 90 bp | CACTCGAGAGAATCTCTGAGTCCTGGCGAGGGCTTTCTGAGGCTTCGTGTGTTACTTTTTCAGACTGTCTaGATTGTCCTAGAGTATATG | + |
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Preference number: 4 (lower is better) Translates to: HSRESLSPGEGFLRLRVLLFQTV*IVLEYM Trigger: CATATACTCTAGGACAATGCAGACAGTCTGAAAAAG...TAACACACGAAGCCTCAGAAAGCCCTCGCCAGGACTCAGAGATTCTCTCGAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR GCA 90 bp | GATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCATAAATAAGGGCACTCCCAGGTaGTTTGACAGGTTCACACAG | + |
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Preference number: 4 (lower is better) Translates to: DTGYPLPVHVPFGQRSINKGTPR*FDRFTQ Trigger: CTGTGTGAACCTGTCAAAGCACCTGGGAGTGCCCTT...ATTTATGGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CCA 90 bp | GTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCCTGTCTGCAACACACTaGTCAAAGATTTCACCCCCA | + |
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Preference number: 4 (lower is better) Translates to: VSDTGYPLPVHVPFGQRSLSATH*SKISPP Trigger: TGGGGGTGAAATCTTTGACCAGTGTGTTGCAGACAG...GGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS-3UTR CCA 90 bp | CACTCGAGAGAATCTCTGAGTCCTGGCGAGGGCTTTCTGAGGCTTCGTGTGTTAACTCTTCGGTTACAATaGATTCCTTGGTTTCTGATT | + |
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Preference number: 4 (lower is better) Translates to: HSRESLSPGEGFLRLRVLTLRLQ*IPWFLI Trigger: AATCAGAAACCAAGGAATCCATTGTAACCGAAGAGT...TAACACACGAAGCCTCAGAAAGCCCTCGCCAGGACTCAGAGATTCTCTCGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR TCA 90 bp | GACAGGTTCACACAGCAGGACTGGGTGAGATTACTGACTTTGTATATGTCTATGCAGGGGTATAGAGTGTaGGAGAGAACAGATGCATGT | + |
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Preference number: 4 (lower is better) Translates to: DRFTQQDWVRLLTLYMSMQGYRV*ERTDAC Trigger: ACATGCATCTGTTCTCTCTCACACTCTATACCCCTG...CATAGACATATACAAAGTCAGTAATCTCACCCAGTCCTGCTGTGTGAACCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR TCA 90 bp | GTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCTTTGGCCTAATACTATaGAGGCTCTTCATGCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: VSDTGYPLPVHVPFGQRSFGLIL*RLFMPC Trigger: ACAGGGCATGAAGAGCCTTCATAGTATTAGGCCAAA...GGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR GCA 90 bp | CACTCGAGAGAATCTCTGAGTCCTGGCGAGGGCTTTCTGAGGCTTCGTGTGTTATTTTCTCATGAACTTTaGAGCAAATTCTTTCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: HSRESLSPGEGFLRLRVLFSHEL*SKFFPR Trigger: TCTGGGAAAGAATTTGCTGCAAAGTTCATGAGAAAA...TAACACACGAAGCCTCAGAAAGCCCTCGCCAGGACTCAGAGATTCTCTCGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR GCA 90 bp | GTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCCTCTCTCTCTCTCTCTaGTCTAGGGGATTTTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSDTGYPLPVHVPFGQRSLSLSL*SRGFYS Trigger: TGAGTAAAATCCCCTAGAGCAGAGAGAGAGAGAGAG...GGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CCA 90 bp | GACAGGTTCACACAGCAGGACTGGGTGAGATTACTGACTTTGTATATGTCTATGGAAACAGGCTGTGGTTaGCATGAAGACACTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DRFTQQDWVRLLTLYMSMETGCG*HEDTLS Trigger: AGAGAGAGTGTCTTCATGCCAACCACAGCCTGTTTC...CATAGACATATACAAAGTCAGTAATCTCACCCAGTCCTGCTGTGTGAACCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CCA 90 bp | GTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCTTCACACAGCAGGACTaGGTGAGATTACTGACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSDTGYPLPVHVPFGQRSFTQQD*VRLLTL Trigger: CAAAGTCAGTAATCTCACCCAGTCCTGCTGTGTGAA...GGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR TCA 90 bp | ACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCATAAATAATGTGAAGGGACAGGTCTaGGTTGTTCATAGTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGYPLPVHVPFGQRSINNVKGQV*VVHSAE Trigger: CTCTGCACTATGAACAACTCAGACCTGTCCCTTCAC...ATTATTTATGGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR TCA 90 bp | ACATTGAAACGGGTAACTGTACCTGTTAAATCTCCTGGTTGGCAACTTTTAAAACACTCCCAGGTGCTTTaGCAGGTTCACACAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLKRVTVPVKSPGWQLLKHSQVL*QVHTAG Trigger: TCCTGCTGTGTGAACCTGTCAAAGCACCTGGGAGTG...TTTTAAAAGTTGCCAACCAGGAGATTTAACAGGTACAGTTACCCGTTTCAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CCA 90 bp | TTCCAGGAAACTGTTAAATCTCCTGGTTGGCAACTTTTAAAATCTGGCTTCCACTCTCCAAAGGGATCATaGTGTTCAGGCCCGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQETVKSPGWQLLKSGFHSPKGS*CSGPLL Trigger: AAGAAGCGGGCCTGAACACCATGATCCCTTTGGAGA...GTGGAAGCCAGATTTTAAAAGTTGCCAACCAGGAGATTTAACAGTTTCCTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR CCA 90 bp | TCTCTCTCTCTCTCTCTCTCTGCTCTAGGGGATTTTACTCACTTTGGGACAAAAGAAAACAGTGCAACCTaGTTGTCTGAAGTGCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSALGDFTHFGTKENSAT*LSEVPD Trigger: ATCAGGCACTTCAGACAACCAGGTTGCACTGTTTTC...TTTTGTCCCAAAGTGAGTAAAATCCCCTAGAGCAGAGAGAGAGAGAGAGAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR TCA 90 bp | ACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCATAAATAATCTTCCAAGACTTACCTaGGACTCAAAACTGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGYPLPVHVPFGQRSINNLPRLT*DSKLWP Trigger: TGGCCACAGTTTTGAGTCTCAGGTAAGTCTTGGAAG...ATTATTTATGGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR GCA 90 bp | ACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCATAAATAATACATTTTCTCACCACTaGAAATTTCCCCCTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGYPLPVHVPFGQRSINNTFSHH*KFPPAQ Trigger: CTGGGCAGGGGGAAATTTGCAGTGGTGAGAAAATGT...ATTATTTATGGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS-3UTR GCA 90 bp | GTTTGTGTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGTGTGTCAACCAGGGGTaGTTTAGACATTCTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VCVSDTGYPLPVHVPFGQCVNQG*FRHSSA Trigger: TGCTGAAGAATGTCTAAAGCACCCCTGGTTGACACA...CTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTACACAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS-3UTR CCA 90 bp | GTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCGCAACTTTTAAAATCTaGCTTCCACCTAACTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VSDTGYPLPVHVPFGQRSATFKI*LPPNST Trigger: TGTGGAGTTAGGTGGAAGCCAGATTTTAAAAGTTGC...GGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS-3UTR TCA 90 bp | GTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCCGAGTGTGTAAAAAGTaGACACCTTCTAAAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSDTGYPLPVHVPFGQRSRVCKK*TPSKIC Trigger: ACAGATTTTAGAAGGTGTTCACTTTTTACACACTCG...GGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS-3UTR TCA 90 bp | GTTTGTGTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGGGATTCCTTGGTTTCTaGTTTGTCGGTATCCGAATT | + |
|
Preference number: 4 (lower is better) Translates to: VCVSDTGYPLPVHVPFGQGFLGF*FVGIRI Trigger: AATTCGGATACCGACAAATCAGAAACCAAGGAATCC...CTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTACACAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS-3UTR TCA 90 bp | GTTTGTGTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGTTTCCTAGCATAGCTTaGGGGCTGATAAGAAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: VCVSDTGYPLPVHVPFGQFPSIA*GLIRNS Trigger: TGAGTTTCTTATCAGCCCTCAAGCTATGCTAGGAAA...CTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTACACAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CCA 90 bp | ACATTGAAACGGGTAACTGTACCTGTTAAATCTCCTGGTTGGCAACTTTTAAAATCTCCAAAGGGATCATaGTGTTCAGGCCCGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLKRVTVPVKSPGWQLLKSPKGS*CSGPLL Trigger: AAGAAGCGGGCCTGAACACCATGATCCCTTTGGAGA...TTTTAAAAGTTGCCAACCAGGAGATTTAACAGGTACAGTTACCCGTTTCAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CCA 90 bp | TCTCTCTCTCTCTCTCTCTCTGCTCTAGGGGATTTTACTCACTTTGGGACAAAACTTAATGTCACCCAATaGAGATTCACTTGTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSALGDFTHFGTKLNVTQ*RFTCQQ Trigger: CTGTTGACAAGTGAATCTCCATTGGGTGACATTAAG...TTTTGTCCCAAAGTGAGTAAAATCCCCTAGAGCAGAGAGAGAGAGAGAGAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CCA 90 bp | GATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCATAAATCTTTACTGGTCACTGTaGGGCATAGATACAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: DTGYPLPVHVPFGQRSINLYWSL*GIDTTE Trigger: TTCAGTTGTATCTATGCCCCACAGTGACCAGTAAAG...ATTTATGGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR TCA 90 bp | ACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCATAAATAATGGCTTCAAATCAAGATaGACTACATCACGAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TGYPLPVHVPFGQRSINNGFKSR*TTSRVC Trigger: ACACACTCGTGATGTAGTTCATCTTGATTTGAAGCC...ATTATTTATGGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS-3UTR GCA 90 bp | GTTTGTGTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGATGTTAACACTCCAATaGTCCACATATCTGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VCVSDTGYPLPVHVPFGQMLTLQ*STYLLP Trigger: TGGCAACAGATATGTGGAGCATTGGAGTGTTAACAT...CTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTACACAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS-3UTR GCA 90 bp | TCTCTCTCTCTCTCTCTCTCTGCTCTAGGGGATTTTACTCACTTTGGGACAAAACTTTTTCAGACTGTCTaGATTGTCCTAGAGTATATG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSALGDFTHFGTKLFQTV*IVLEYM Trigger: CATATACTCTAGGACAATGCAGACAGTCTGAAAAAG...TTTTGTCCCAAAGTGAGTAAAATCCCCTAGAGCAGAGAGAGAGAGAGAGAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CCA 90 bp | TCTCTCTCTCTCTCTCTCTCTGCTCTAGGGGATTTTACTCACTTTGGGACAAAAACTCTTCGGTTACAATaGATTCCTTGGTTTCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSALGDFTHFGTKTLRLQ*IPWFLI Trigger: AATCAGAAACCAAGGAATCCATTGTAACCGAAGAGT...TTTTGTCCCAAAGTGAGTAAAATCCCCTAGAGCAGAGAGAGAGAGAGAGAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CCA 90 bp | GATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCATAAATGCAACTTTTAAAATCTaGCTTCCACCTAACTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: DTGYPLPVHVPFGQRSINATFKI*LPPNST Trigger: TGTGGAGTTAGGTGGAAGCCAGATTTTAAAAGTTGC...ATTTATGGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS-3UTR CCA 90 bp | GTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCTCTTATACATCTTTTTaGGACAAAGTACCTCCTACT | + |
|
Preference number: 4 (lower is better) Translates to: VSDTGYPLPVHVPFGQRSSYTSF*DKVPPT Trigger: AGTAGGAGGTACTTTGTCCCAAAAAGATGTATAAGA...GGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR TCA 90 bp | ACATTGAAACGGGTAACTGTACCTGTTAAATCTCCTGGTTGGCAACTTTTAAAACTGAAAGAAGGCTCTTaGATACTGCTCTGTGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLKRVTVPVKSPGWQLLKLKEGS*ILLCVN Trigger: GTTGACACAGAGCAGTATTCAAGAGCCTTCTTTCAG...TTTTAAAAGTTGCCAACCAGGAGATTTAACAGGTACAGTTACCCGTTTCAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR TCA 90 bp | ACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCATAAATAATCATGATTTTGACAGTTaGGAAACCATGTTAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGYPLPVHVPFGQRSINNHDFDS*ETMLGR Trigger: TCTCCCTAACATGGTTTCTCAACTGTCAAAATCATG...ATTATTTATGGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR GCA 90 bp | GACAGGTTCACACAGCAGGACTGGGTGAGATTACTGACTTTGTATATGTCTATGTTTTCTCATGAACTTTaGAGCAAATTCTTTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DRFTQQDWVRLLTLYMSMFSHEL*SKFFPR Trigger: TCTGGGAAAGAATTTGCTGCAAAGTTCATGAGAAAA...CATAGACATATACAAAGTCAGTAATCTCACCCAGTCCTGCTGTGTGAACCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR GCA 90 bp | ACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCATAAATAATGCTCCACATATCTGTTaGCATGCTTATAGGATCATA | + |
|
Preference number: 4 (lower is better) Translates to: TGYPLPVHVPFGQRSINNAPHIC*HAYRII Trigger: TATGATCCTATAAGCATGGCAACAGATATGTGGAGC...ATTATTTATGGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS-3UTR CCA 90 bp | ACATTGAAACGGGTAACTGTACCTGTTAAATCTCCTGGTTGGCAACTTTTAAAAGACATTCTTCAGCAGTaGCTCGATCTTCAGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLKRVTVPVKSPGWQLLKDILQQ*LDLQVS Trigger: AGAAACCTGAAGATCGAGCCACTGCTGAAGAATGTC...TTTTAAAAGTTGCCAACCAGGAGATTTAACAGGTACAGTTACCCGTTTCAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CCA 90 bp | ACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCATAAATAATTTAATTGGACTTTACTaGTCACTGTGGGGCATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGYPLPVHVPFGQRSINNLIGLY*SLWGID Trigger: ATCTATGCCCCACAGTGACCAGTAAAGTCCAATTAA...ATTATTTATGGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CCA 90 bp | CCTCAAGCTTCCCTGTCTGAGACTCAAAACTGTGGCCATGGATATTCATTAAAAAAAACTCTATCACTGTaGCACAATTTCTTCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PQASLSETQNCGHGYSLKKTLSL*HNFFFC Trigger: GCAGAAGAAGAAATTGTGCCACAGTGATAGAGTTTT...TTTTAATGAATATCCATGGCCACAGTTTTGAGTCTCAGACAGGGAAGCTTGAGG 40% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR GCA 90 bp | CTGTCTGAGACTCAAAACTGTGGCCATGGATATTCATTAAAAACTCTATCACTGATGTTAACACTCCAATaGTCCACATATCTGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSETQNCGHGYSLKTLSLMLTLQ*STYLLP Trigger: TGGCAACAGATATGTGGAGCATTGGAGTGTTAACAT...CAGTGATAGAGTTTTTAATGAATATCCATGGCCACAGTTTTGAGTCTCAGACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR CCA 90 bp | CTGTCTGAGACTCAAAACTGTGGCCATGGATATTCATTAAAAACTCTATCACTGCTTAATGTCACCCAATaGAGATTCACTTGTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LSETQNCGHGYSLKTLSLLNVTQ*RFTCQQ Trigger: CTGTTGACAAGTGAATCTCCATTGGGTGACATTAAG...CAGTGATAGAGTTTTTAATGAATATCCATGGCCACAGTTTTGAGTCTCAGACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR CCA 90 bp | GTTTGTGTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGTTACAATGGATTCCTTaGTTTCTGATTTGTCGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VCVSDTGYPLPVHVPFGQLQWIP*FLICRY Trigger: ATACCGACAAATCAGAAACCAAGGAATCCATTGTAA...CTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTACACAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS-3UTR GCA 90 bp | GTAGAATTCAAAGGTGCCAACATCTCCCTTCTTAAAAATAACATTGAAACGGGTGCTCCACATATCTGTTaGCATGCTTATAGGATCATA | + |
|
Preference number: 4 (lower is better) Translates to: VEFKGANISLLKNNIETGAPHIC*HAYRII Trigger: TATGATCCTATAAGCATGGCAACAGATATGTGGAGC...ACCCGTTTCAATGTTATTTTTAAGAAGGGAGATGTTGGCACCTTTGAATTCTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR TCA 90 bp | ACATTGAAACGGGTAACTGTACCTGTTAAATCTCCTGGTTGGCAACTTTTAAAATTTTGTTTGTGTAAGTaGTACTGGTTATCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLKRVTVPVKSPGWQLLKFCLCK*YWLSTS Trigger: GGAAGTGGATAACCAGTATCACTTACACAAACAAAA...TTTTAAAAGTTGCCAACCAGGAGATTTAACAGGTACAGTTACCCGTTTCAATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CCA 90 bp | ACATTGAAACGGGTAACTGTACCTGTTAAATCTCCTGGTTGGCAACTTTTAAAAAAAACTCTATCACTGTaGCACAATTTCTTCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLKRVTVPVKSPGWQLLKKTLSL*HNFFFC Trigger: GCAGAAGAAGAAATTGTGCCACAGTGATAGAGTTTT...TTTTAAAAGTTGCCAACCAGGAGATTTAACAGGTACAGTTACCCGTTTCAATGT 37% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CCA 90 bp | GTAGAATTCAAAGGTGCCAACATCTCCCTTCTTAAAAATAACATTGAAACGGGTTTACAATGGATTCCTTaGTTTCTGATTTGTCGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VEFKGANISLLKNNIETGLQWIP*FLICRY Trigger: ATACCGACAAATCAGAAACCAAGGAATCCATTGTAA...ACCCGTTTCAATGTTATTTTTAAGAAGGGAGATGTTGGCACCTTTGAATTCTAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CCA 90 bp | GTAGAATTCAAAGGTGCCAACATCTCCCTTCTTAAAAATAACATTGAAACGGGTACTGATACCTACAAGTaGCCAAAATTAAATGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: VEFKGANISLLKNNIETGTDTYK*PKLNDK Trigger: CTTGTCATTTAATTTTGGCCACTTGTAGGTATCAGT...ACCCGTTTCAATGTTATTTTTAAGAAGGGAGATGTTGGCACCTTTGAATTCTAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS GCA 90 bp | GCTCCCGGCCCGGGCACAGGCTGTAGCCGTCCTGGAAGGGCTCGGTaGGCACCACGGCGCGTATCTCTGTCAGCAGCCCGCGGGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: APGPGTGCSRPGRAR*APRRVSLSAARGPG Trigger: CCCAGGCCCGCGGGCTGCTGACAGAGATACGCGCCGTGGTGCGCACCGAGCCCTTCCAGGACGGCTACAGCCTGTGCCCGGGCCGGGAGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS GCA 90 bp | AGCTCCCGCGGGGTCCTGAGCGCCCGATGCCTCACGCGCGCCCTCTaGAGCTCAGGGGGAGAAGGTGCAGCTTTCGGGACGGCCCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSRGVLSARCLTRAL*SSGGEGAAFGTARR Trigger: CCTCCGGGCCGTCCCGAAAGCTGCACCTTCTCCCCCTGAGCTGCAGAGGGCGCGCGTGAGGCATCGGGCGCTCAGGACCCCGCGGGAGCT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000462448.1 |
||
| CDS GCA 90 bp | CGCCCGATGCCTCACGCGCGCCCTCTGCAGCTCAGGGGGAGAAGGTaGAGCTTTCGGGACGGCCCGGAGGCTGGAGGCGACTCACAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RPMPHARPLQLRGRR*SFRDGPEAGGDSQH Trigger: GTGCTGTGAGTCGCCTCCAGCCTCCGGGCCGTCCCGAAAGCTGCACCTTCTCCCCCTGAGCTGCAGAGGGCGCGCGTGAGGCATCGGGCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000462448.1 |
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| CDS-3UTR CAA 90 bp | CGAGGGCTTTCTGAGGCTTCGTGTGTTAGCAGCTGTTGTCTTCCAACTCAGCGGAACTCAGCGGCAGGTTaGCCTTTCCCCACGGACACT | + |
|
Preference number: 5 (lower is better) Translates to: RGLSEASCVSSCCLPTQRNSAAG*PFPTDT Trigger: AGTGTCCGTGGGGAAAGGCAAACCTGCCGCTGAGTT...CCGCTGAGTTGGAAGACAACAGCTGCTAACACACGAAGCCTCAGAAAGCCCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR CAA 90 bp | TCTGAGGCTTCGTGTGTTAGCAGCTGTTGTCTTCCAACTCAGCGGCAGGTTTGCCCTGAAAGAAGGCTCTaGAATACTGCTCTGTGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SEASCVSSCCLPTQRQVCPERRL*NTALCQ Trigger: TTGACACAGAGCAGTATTCAAGAGCCTTCTTTCAGG...GCAAACCTGCCGCTGAGTTGGAAGACAACAGCTGCTAACACACGAAGCCTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648544.1 |
||
| CDS-3UTR CAA 90 bp | CACTCGAGAGAATCTCTGAGTCCTGGCGAGGGCTTTCTGAGGCTTCGTGTGTTACTTCTTGGAGGGCATTaGCTTCTTCTAGTGCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: HSRESLSPGEGFLRLRVLLLGGH*LLLVPF Trigger: AAAAGGCACTAGAAGAAGCAAATGCCCTCCAAGAAG...TAACACACGAAGCCTCAGAAAGCCCTCGCCAGGACTCAGAGATTCTCTCGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648544.1 |
||
| CDS TCA 90 bp | GACCTTCTTGGAGGGCATTTGCTTCTTCTAGTGCCTTTTCCATCCTaGAAGAAGGCTCTTGAATACTGCTCTGTGTCAACCAGGGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: DLLGGHLLLLVPFPS*KKALEYCSVSTRGA Trigger: AGCACCCCTGGTTGACACAGAGCAGTATTCAAGAGCCTTCTTTCAGGATGGAAAAGGCACTAGAAGAAGCAAATGCCCTCCAAGAAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000319357.6 ENST00000474211.1 ENST00000648544.1 |
||
| CDS-3UTR CAA 90 bp | CACTCGAGAGAATCTCTGAGTCCTGGCGAGGGCTTTCTGAGGCTTCGTGTGTTATCTGCATTTTGGAGCTaGTTTAGGAATGCTAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: HSRESLSPGEGFLRLRVLSAFWS*FRNARF Trigger: GAACCTAGCATTCCTAAACAAGCTCCAAAATGCAGA...TAACACACGAAGCCTCAGAAAGCCCTCGCCAGGACTCAGAGATTCTCTCGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR CAA 90 bp | GTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCCCTGAAAGAAGGCTCTaGAATACTGCTCTGTGTCAA | + |
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Preference number: 5 (lower is better) Translates to: VSDTGYPLPVHVPFGQRSPERRL*NTALCQ Trigger: TTGACACAGAGCAGTATTCAAGAGCCTTCTTTCAGG...GGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS-3UTR CAA 90 bp | TCTCTCTCTCTCTCTCTCTCTGCTCTAGGGGATTTTACTCACTTTGGGACAAAACACAGAATGACCTTCTaGGAGGGCATTTGCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SLSLSLSALGDFTHFGTKHRMTF*EGICFF Trigger: GAAGAAGCAAATGCCCTCCAAGAAGGTCATTCTGTG...TTTTGTCCCAAAGTGAGTAAAATCCCCTAGAGCAGAGAGAGAGAGAGAGAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS TCA 90 bp | GCATTTGCTTCTTCTAGTGCCTTTTCCATCCTGAAAGAAGGCTCTTaGATACTGCTCTGTGTCAACCAGGGGTGCTTTAGACATTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: AFASSSAFSILKEGS*ILLCVNQGCFRHSS Trigger: TGAAGAATGTCTAAAGCACCCCTGGTTGACACAGAGCAGTATTCAAGAGCCTTCTTTCAGGATGGAAAAGGCACTAGAAGAAGCAAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000319357.6 ENST00000474211.1 ENST00000648544.1 |
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| CDS-3UTR CAA 90 bp | TCTCTCTCTCTCTCTCTCTCTGCTCTAGGGGATTTTACTCACTTTGGGACAAAACTTCTTGGAGGGCATTaGCTTCTTCTAGTGCCTTTT | + |
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Preference number: 5 (lower is better) Translates to: SLSLSLSALGDFTHFGTKLLGGH*LLLVPF Trigger: AAAAGGCACTAGAAGAAGCAAATGCCCTCCAAGAAG...TTTTGTCCCAAAGTGAGTAAAATCCCCTAGAGCAGAGAGAGAGAGAGAGAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CAA 90 bp | GTTTGTGTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGCACAGAATGACCTTCTaGGAGGGCATTTGCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: VCVSDTGYPLPVHVPFGQHRMTF*EGICFF Trigger: GAAGAAGCAAATGCCCTCCAAGAAGGTCATTCTGTG...CTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTACACAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS-3UTR CAA 90 bp | GTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGAGGTCCTCTGCATTTTGGAGCTaGTTTAGGAATGCTAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: VSDTGYPLPVHVPFGQRSSAFWS*FRNARF Trigger: GAACCTAGCATTCCTAAACAAGCTCCAAAATGCAGA...GGACCTCTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS-3UTR CAA 90 bp | ACATTGAAACGGGTAACTGTACCTGTTAAATCTCCTGGTTGGCAACTTTTAAAAAGGGACAGGTCTGAGTaGTTCATAGTGCAGAGCGAG | + |
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Preference number: 5 (lower is better) Translates to: TLKRVTVPVKSPGWQLLKRDRSE*FIVQSE Trigger: CTCGCTCTGCACTATGAACAACTCAGACCTGTCCCT...TTTTAAAAGTTGCCAACCAGGAGATTTAACAGGTACAGTTACCCGTTTCAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CAA 90 bp | GTTTGTGTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGTTCCATCCGACAATCTaGGCCTTTTCTTCTTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: VCVSDTGYPLPVHVPFGQFHPTI*AFSSFS Trigger: AGAAAAAGAAGAAAAGGCCAAGATTGTCGGATGGAA...CTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTACACAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS-3UTR CAA 90 bp | GTTTGTGTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGTTAATGACCCAAGGATaGTCTTGTGCTAGTTCAAGT | + |
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Preference number: 5 (lower is better) Translates to: VCVSDTGYPLPVHVPFGQLMTQG*SCASSS Trigger: ACTTGAACTAGCACAAGACAATCCTTGGGTCATTAA...CTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTACACAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS-3UTR CAA 90 bp | TCTCTCTCTCTCTCTCTCTCTGCTCTAGGGGATTTTACTCACTTTGGGACAAAATCCTTGGTTTCTGATTaGTCGGTATCCGAATTAATT | + |
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Preference number: 5 (lower is better) Translates to: SLSLSLSALGDFTHFGTKSLVSD*SVSELI Trigger: AATTAATTCGGATACCGACAAATCAGAAACCAAGGA...TTTTGTCCCAAAGTGAGTAAAATCCCCTAGAGCAGAGAGAGAGAGAGAGAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CAA 90 bp | TCTCTCTCTCTCTCTCTCTCTGCTCTAGGGGATTTTACTCACTTTGGGACAAAATTCTTATACATCTTTTaGGGACAAAGTACCTCCTAC | + |
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Preference number: 5 (lower is better) Translates to: SLSLSLSALGDFTHFGTKFLYIF*GQSTSY Trigger: GTAGGAGGTACTTTGTCCCAAAAAGATGTATAAGAA...TTTTGTCCCAAAGTGAGTAAAATCCCCTAGAGCAGAGAGAGAGAGAGAGAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CAA 90 bp | GTAGAATTCAAAGGTGCCAACATCTCCCTTCTTAAAAATAACATTGAAACGGGTGTTAGGGAGAGAGCTTaGTGTGACACCCTAATCAGA | + |
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Preference number: 5 (lower is better) Translates to: VEFKGANISLLKNNIETGVRERA*CDTLIR Trigger: TCTGATTAGGGTGTCACACAAAGCTCTCTCCCTAAC...ACCCGTTTCAATGTTATTTTTAAGAAGGGAGATGTTGGCACCTTTGAATTCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CAA 90 bp | GTAGAATTCAAAGGTGCCAACATCTCCCTTCTTAAAAATAACATTGAAACGGGTAACAGTGCAACCTGGTaGTCTGAAGTGCCTGATGAA | + |
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Preference number: 5 (lower is better) Translates to: VEFKGANISLLKNNIETGNSATW*SEVPDE Trigger: TTCATCAGGCACTTCAGACAACCAGGTTGCACTGTT...ACCCGTTTCAATGTTATTTTTAAGAAGGGAGATGTTGGCACCTTTGAATTCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CAA 90 bp | GTTTGTGTAAGTGATACTGGTTATCCACTTCCAGTACATGTACCATTTGGCCAGTCCTTGGTTTCTGATTaGTCGGTATCCGAATTAATT | + |
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Preference number: 5 (lower is better) Translates to: VCVSDTGYPLPVHVPFGQSLVSD*SVSELI Trigger: AATTAATTCGGATACCGACAAATCAGAAACCAAGGA...CTGGCCAAATGGTACATGTACTGGAAGTGGATAACCAGTATCACTTACACAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS TCA 90 bp | GGTACCCATAATTTCTCGGAGCTCTTCACTGTTCTTCAATATTCTTaGAAGGCCAAAATCAACAATCTTAATGTCACCCAATGGAGATTC | + |
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Preference number: 5 (lower is better) Translates to: GTHNFSELFTVLQYS*KAKINNLNVTQWRF Trigger: GAATCTCCATTGGGTGACATTAAGATTGTTGATTTTGGCCTTTCAAGAATATTGAAGAACAGTGAAGAGCTCCGAGAAATTATGGGTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000319357.6 ENST00000462448.1 ENST00000648544.1 |
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| CDS-3UTR CAA 90 bp | CTGTCTGAGACTCAAAACTGTGGCCATGGATATTCATTAAAAACTCTATCACTGTTCCATCCGACAATCTaGGCCTTTTCTTCTTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: LSETQNCGHGYSLKTLSLFHPTI*AFSSFS Trigger: AGAAAAAGAAGAAAAGGCCAAGATTGTCGGATGGAA...CAGTGATAGAGTTTTTAATGAATATCCATGGCCACAGTTTTGAGTCTCAGACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR CAA 90 bp | CTGTCTGAGACTCAAAACTGTGGCCATGGATATTCATTAAAAACTCTATCACTGTTAATGACCCAAGGATaGTCTTGTGCTAGTTCAAGT | + |
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Preference number: 5 (lower is better) Translates to: LSETQNCGHGYSLKTLSLLMTQG*SCASSS Trigger: ACTTGAACTAGCACAAGACAATCCTTGGGTCATTAA...CAGTGATAGAGTTTTTAATGAATATCCATGGCCACAGTTTTGAGTCTCAGACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR CAA 90 bp | TTCCAGGAAACTGTTAAATCTCCTGGTTGGCAACTTTTAAAATCTGGCTTCCACTCAAATTTAAATCGTTaGGAAATGGCCTTTTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: FQETVKSPGWQLLKSGFHSNLNR*EMAFCS Trigger: GGAGCAAAAGGCCATTTCCAAACGATTTAAATTTGA...GTGGAAGCCAGATTTTAAAAGTTGCCAACCAGGAGATTTAACAGTTTCCTGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS-3UTR CAA 90 bp | ACATTGAAACGGGTAACTGTACCTGTTAAATCTCCTGGTTGGCAACTTTTAAAACCAATGGAGATTCACTaGTCAACAGAATATTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: TLKRVTVPVKSPGWQLLKPMEIH*STEYSE Trigger: CTCAGAATATTCTGTTGACAAGTGAATCTCCATTGG...TTTTAAAAGTTGCCAACCAGGAGATTTAACAGGTACAGTTACCCGTTTCAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS-3UTR CAA 90 bp | GTAGAATTCAAAGGTGCCAACATCTCCCTTCTTAAAAATAACATTGAAACGGGTTCAAATTTAAATCGTTaGGAAATGGCCTTTTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: VEFKGANISLLKNNIETGSNLNR*EMAFCS Trigger: GGAGCAAAAGGCCATTTCCAAACGATTTAAATTTGA...ACCCGTTTCAATGTTATTTTTAAGAAGGGAGATGTTGGCACCTTTGAATTCTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319357.6 |
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| CDS GCA 72 bp | CCCTCGCTGAGCTCCCGCGGGGTCCTGAGCGCCCGATaGCTCACGCGCGCCCTCTGCAGCTCAGGGGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: PSLSSRGVLSAR*LTRALCSSGGE Trigger: TTCTCCCCCTGAGCTGCAGAGGGCGCGCGTGAGGCATCGGGCGCTCAGGACCCCGCGGGAGCTCAGCGAGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000462448.1 |
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| CDS GCA 72 bp | CCTCACGCGCGCCCTCTGCAGCTCAGGGGGAGAAGGTaGAGCTTTCGGGACGGCCCGGAGGCTGGAGGCGAC | + |
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Preference number: 6 (lower is better) Translates to: PHARPLQLRGRR*SFRDGPEAGGD Trigger: GTCGCCTCCAGCCTCCGGGCCGTCCCGAAAGCTGCACCTTCTCCCCCTGAGCTGCAGAGGGCGCGCGTGAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000462448.1 |
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| CDS GCA 72 bp | TTCAAACACCCGCTCTCCCCAGCGCGGCGCTCGGACTaGGGCAGGCAGACTACCGGTAGCTCGGGCCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: FKHPLSPARRSD*GRQTTGSSGPP Trigger: GGGCGGGCCCGAGCTACCGGTAGTCTGCCTGCCGCAGTCCGAGCGCCGCGCTGGGGAGAGCGGGTGTTTGAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648544.1 |
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| CDS GCA 72 bp | CCGGGCACAGGCTGTAGCCGTCCTGGAAGGGCTCGGTaGGCACCACGGCGCGTATCTCTGTCAGCAGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: PGTGCSRPGRAR*APRRVSLSAAR Trigger: GCGGGCTGCTGACAGAGATACGCGCCGTGGTGCGCACCGAGCCCTTCCAGGACGGCTACAGCCTGTGCCCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS GCA 72 bp | CCGAGCCTGAGGTGGCGCCTGGGGAGGAGCCGCCGCTaGCTGGCTTCTCCAAAGGGATCATGGTGTTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: PSLRWRLGRSRR*LASPKGSWCSG Trigger: GCCTGAACACCATGATCCCTTTGGAGAAGCCAGGCAGCGGCGGCTCCTCCCCAGGCGCCACCTCAGGCTCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS CCA 72 bp | GGGGAGAAGGTGCAGCTTTCGGGACGGCCCGGAGGCTaGAGGCGACTCACAGCACCACCCTTTGGCCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: GEKVQLSGRPGG*RRLTAPPFGQD Trigger: GTCCTGGCCAAAGGGTGGTGCTGTGAGTCGCCTCCAGCCTCCGGGCCGTCCCGAAAGCTGCACCTTCTCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462448.1 |
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| CDS CAA 90 bp | TTTCGGGACGGCCCGGAGGCTGGAGGCGACTCACAGCACCACCCTTaGGCCAGGACAGCCTACTGCGTTAGCAGAGTTGCGCACCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: FRDGPEAGGDSQHHP*ARTAYCVSRVAHLL Trigger: CAACAGGTGCGCAACTCTGCTAACGCAGTAGGCTGTCCTGGCCAAAGGGTGGTGCTGTGAGTCGCCTCCAGCCTCCGGGCCGTCCCGAAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462448.1 |
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| CDS CCA 72 bp | CCAAAGGGATCATGGTGTTCAGGCCCGCTTCTTTCCTaGCCGCCTGTTCACTCCGAGCAGCCGGAGGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: PKGSWCSGPLLS*PPVHSEQPEGH Trigger: GTGACCCTCCGGCTGCTCGGAGTGAACAGGCGGCCAGGAAAGAAGCGGGCCTGAACACCATGATCCCTTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS CCA 72 bp | AGGAGCCGCCGCTGCCTGGCTTCTCCAAAGGGATCATaGTGTTCAGGCCCGCTTCTTTCCTGGCCGCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: RSRRCLASPKGS*CSGPLLSWPPV Trigger: AACAGGCGGCCAGGAAAGAAGCGGGCCTGAACACCATGATCCCTTTGGAGAAGCCAGGCAGCGGCGGCTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000319357.6 ENST00000648544.1 |
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| CDS CAA 90 bp | GTATATGAAGTAACTACAATTAACTCTTCGGTTACAATGGATTCCTaGGTTTCTGATTTGTCGGTATCCGAATTAATTTCAGGCACAGAA | + |
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Preference number: 6 (lower is better) Translates to: VYEVTTINSSVTMDS*VSDLSVSELISGTE Trigger: TTCTGTGCCTGAAATTAATTCGGATACCGACAAATCAGAAACCAAGGAATCCATTGTAACCGAAGAGTTAATTGTAGTTACTTCATATAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000319357.6 ENST00000474211.1 ENST00000648544.1 |
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