RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STARD5 (Homo sapiens)

Ensembl gene IDs: ENSG00000172345

Ensembl transcript IDs: ENST00000302824.7, ENST00000325346.6, ENST00000559913.1, ENST00000560156.1, ENST00000560723.5, ENST00000560916.1

Found 434 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGCCAGAGTGCATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATaGTTAGAGGCCTGGGTCTACCCTGCCAGGAGAGGCGTGTTTGGG +
Preference number: 1 (lower is better)
Translates to: VPECIAWCPGRVSVR*LEAWVYPARRGVFG
Trigger: CCCAAACACGCCTCTCCTGGCAGGGTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCGATGCACTCTGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR TCA 90 bp CCCTTGACCAGGCCTGGGCCAGAGTATTGGTCTCCTCTCAGCCCCTaGTCCTGTGAAGTAAGGATGTGGGGGAAGACCTGGCAAGGACAC +
Preference number: 1 (lower is better)
Translates to: PLTRPGPEYWSPLSP*SCEVRMWGKTWQGH
Trigger: GTGTCCTTGCCAGGTCTTCCCCCACATCCTTACTTCACAGGATCAGGGGCTGAGAGGAGACCAATACTCTGGCCCAGGCCTGGTCAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CCA 90 bp GGGGCTGCTGGCCTGAATGCTTATAGGTGGCCTCTCCTTGTGGCCTaGGCCTCCTCACAACATGGTGTCTGGATTCCCAGGATGAGCATC +
Preference number: 1 (lower is better)
Translates to: GAAGLNAYRWPLLVA*ASSQHGVWIPRMSI
Trigger: GATGCTCATCCTGGGAATCCAGACACCATGTTGTGAGGAGGCCCAGGCCACAAGGAGAGGCCACCTATAAGCATTCAGGCCAGCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR GCA 90 bp AGGCAGGAAGGGTGGGCTGCCGCCTCTGGTTGGCATTCTCAGAGATaGGCAGTCCATCAGCTTGTTCCAAAGAGTGAACACAGGCCTCTG +
Preference number: 1 (lower is better)
Translates to: RQEGWAAASGWHSQR*AVHQLVPKSEHRPL
Trigger: CAGAGGCCTGTGTTCACTCTTTGGAACAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAGCCCACCCTTCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR CCA 90 bp AGGTGGCCTCTCCTTGTGGCCTGGGCCTCCTCACAACATGGTGTCTaGATTCCCAGGATGAGCATCCCAGGATCGCAAGAGCCATGTAGA +
Preference number: 1 (lower is better)
Translates to: RWPLLVAWASSQHGV*IPRMSIPGSQEPCR
Trigger: TCTACATGGCTCTTGCGATCCTGGGATGCTCATCCTGGGAATCCAGACACCATGTTGTGAGGAGGCCCAGGCCACAAGGAGAGGCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR TCA 90 bp GGCCATCTCTGGATGCCTGATTGCCAAGCTCAGGACCAGGCAATGTaGCTTTGCATCAGCAACAACCAGCATCCCTTGACCAGGCCTGGG +
Preference number: 1 (lower is better)
Translates to: GHLWMPDCQAQDQAM*LCISNNQHPLTRPG
Trigger: CCCAGGCCTGGTCAAGGGATGCTGGTTGTTGCTGATGCAAAGTCACATTGCCTGGTCCTGAGCTTGGCAATCAGGCATCCAGAGATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR GCA 90 bp TCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACCCTaGCAGGAGAGGCGTGTTTGGGTAACAGGCAGATGGAGTTTGGAA +
Preference number: 1 (lower is better)
Translates to: SRPSLCQMVRGLGLP*QERRVWVTGRWSLE
Trigger: TTCCAAACTCCATCTGCCTGTTACCCAAACACGCCTCTCCTGGCAGGGTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR CCA 90 bp GTCATGCAAAGGCTGGGACCACGTGAGATCATTCACTCATACATCTaGCCGTTGATGTTGGCTGGGAACTCACCTGGGGCTGCTGGCCTG +
Preference number: 1 (lower is better)
Translates to: VMQRLGPREIIHSYI*PLMLAGNSPGAAGL
Trigger: CAGGCCAGCAGCCCCAGGTGAGTTCCCAGCCAACATCAACGGCCAGATGTATGAGTGAATGATCTCACGTGGTCCCAGCCTTTGCATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CCA 90 bp AAACCGGGTCATGCTGCGGGGGAAGAAGGAGTCCACCACGTTCTGTaGGAGGTAACCGCTGAGGTCGGTATGGAAGAATGTGACCAGGTT +
Preference number: 1 (lower is better)
Translates to: KPGHAAGEEGVHHVL*EVTAEVGMEECDQV
Trigger: AACCTGGTCACATTCTTCCATACCGACCTCAGCGGTTACCTCCCACAGAACGTGGTGGACTCCTTCTTCCCCCGCAGCATGACCCGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR TCA 90 bp TTGGCATTCTCAGAGATGCGCAGTCCATCAGCTTGTTCCAAAGAGTaGACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCCAAC +
Preference number: 1 (lower is better)
Translates to: LAFSEMRSPSACSKE*TQASACSQAPWCPN
Trigger: GTTGGGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGGAACAAGCTGATGGACTGCGCATCTCTGAGAATGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR TCA 90 bp AGGACCAGGCAATGTGACTTTGCATCAGCAACAACCAGCATCCCTTaGCCAGGCCTGGGCCAGAGTATTGGTCTCCTCTCAGCCCCTGAT +
Preference number: 1 (lower is better)
Translates to: RTRQCDFASATTSIP*PGLGQSIGLLSAPD
Trigger: ATCAGGGGCTGAGAGGAGACCAATACTCTGGCCCAGGCCTGGTCAAGGGATGCTGGTTGTTGCTGATGCAAAGTCACATTGCCTGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CCA 90 bp CTGGGTCTACCCTGCCAGGAGAGGCGTGTTTGGGTAACAGGCAGATaGAGTTTGGAACACATGAATGGCTCATCACACGCCAACCCTGAG +
Preference number: 1 (lower is better)
Translates to: LGLPCQERRVWVTGR*SLEHMNGSSHANPE
Trigger: CTCAGGGTTGGCGTGTGATGAGCCATTCATGTGTTCCAAACTCCATCTGCCTGTTACCCAAACACGCCTCTCCTGGCAGGGTAGACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR TCA 90 bp TTGTGGCCTGGGCCTCCTCACAACATGGTGTCTGGATTCCCAGGATaGGCATCCCAGGATCGCAAGAGCCATGTAGAAGCTGCATCTTGT +
Preference number: 1 (lower is better)
Translates to: LWPGPPHNMVSGFPG*ASQDRKSHVEAASC
Trigger: ACAAGATGCAGCTTCTACATGGCTCTTGCGATCCTGGGATGCTCATCCTGGGAATCCAGACACCATGTTGTGAGGAGGCCCAGGCCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR GCA 90 bp CTGTTCAAGAGCACACTTGGCCCAAGTGGCAGAGCTTGGACTGGATaGATGTTTTCCAGCTCCTCATCCAGGGCTCTGACCAGTTTAACC +
Preference number: 1 (lower is better)
Translates to: LFKSTLGPSGRAWTG*MFSSSSSRALTSLT
Trigger: GGTTAAACTGGTCAGAGCCCTGGATGAGGAGCTGGAAAACATGCATCCAGTCCAAGCTCTGCCACTTGGGCCAAGTGTGCTCTTGAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR GCA 90 bp GGAATTGCTTCACTGCTTTCTGAAGGTTGGCATAAAACCGGGTCATaGTGCGGGGGAAGAAGGAGTCCACCACGTTCTGTGGGAGGTAAC +
Preference number: 1 (lower is better)
Translates to: GIASLLSEGWHKTGS*CGGRRSPPRSVGGN
Trigger: GTTACCTCCCACAGAACGTGGTGGACTCCTTCTTCCCCCGCAGCATGACCCGGTTTTATGCCAACCTTCAGAAAGCAGTGAAGCAATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR CCA 90 bp CAGATGGTTAGAGGCCTGGGTCTACCCTGCCAGGAGAGGCGTGTTTaGGTAACAGGCAGATGGAGTTTGGAACACATGAATGGCTCATCA +
Preference number: 1 (lower is better)
Translates to: QMVRGLGLPCQERRV*VTGRWSLEHMNGSS
Trigger: TGATGAGCCATTCATGTGTTCCAAACTCCATCTGCCTGTTACCCAAACACGCCTCTCCTGGCAGGGTAGACCCAGGCCTCTAACCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR CCA 90 bp GTGACTGTTCAAGAGCACACTTGGCCCAAGTGGCAGAGCTTGGACTaGATGCATGTTTTCCAGCTCCTCATCCAGGGCTCTGACCAGTTT +
Preference number: 1 (lower is better)
Translates to: VTVQEHTWPKWQSLD*MHVFQLLIQGSDQF
Trigger: AAACTGGTCAGAGCCCTGGATGAGGAGCTGGAAAACATGCATCCAGTCCAAGCTCTGCCACTTGGGCCAAGTGTGCTCTTGAACAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR GCA 90 bp CCTGAGTGCCTGGCCAAAGGGATATTTGGTTTGGCCATCTCTGGATaGCTGATTGCCAAGCTCAGGACCAGGCAATGTGACTTTGCATCA +
Preference number: 1 (lower is better)
Translates to: PECLAKGIFGLAISG*LIAKLRTRQCDFAS
Trigger: TGATGCAAAGTCACATTGCCTGGTCCTGAGCTTGGCAATCAGGCATCCAGAGATGGCCAAACCAAATATCCCTTTGGCCAGGCACTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR TCA 90 bp AGTGCCTGGCCAAAGGGATATTTGGTTTGGCCATCTCTGGATGCCTaGTTGCCAAGCTCAGGACCAGGCAATGTGACTTTGCATCAGCAA +
Preference number: 1 (lower is better)
Translates to: SAWPKGYLVWPSLDA*LPSSGPGNVTLHQQ
Trigger: TTGCTGATGCAAAGTCACATTGCCTGGTCCTGAGCTTGGCAATCAGGCATCCAGAGATGGCCAAACCAAATATCCCTTTGGCCAGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR GCA 90 bp AGCCCAAGATGCTTTAAGTGCACAACATTACAGGGAATGCCTGAGTaGCTGGCCAAAGGGATATTTGGTTTGGCCATCTCTGGATGCCTG +
Preference number: 1 (lower is better)
Translates to: SPRCFKCTTLQGMPE*LAKGIFGLAISGCL
Trigger: CAGGCATCCAGAGATGGCCAAACCAAATATCCCTTTGGCCAGGCACTCAGGCATTCCCTGTAATGTTGTGCACTTAAAGCATCTTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR GCA 90 bp GTGATGTGGAGGGCACATTCCTTGCCTGCACAAACTCACCATCTGTaGACGCAGTGGCCTTCCCTAAAATCAGGGAATTGTTTTAAGTCT +
Preference number: 1 (lower is better)
Translates to: VMWRAHSLPAQTHHL*TQWPSLKSGNCFKS
Trigger: AGACTTAAAACAATTCCCTGATTTTAGGGAAGGCCACTGCGTGCACAGATGGTGAGTTTGTGCAGGCAAGGAATGTGCCCTCCACATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CCA 90 bp AACGATAGCATTACTCATGGAATTGCTTCACTGCTTTCTGAAGGTTaGCATAAAACCGGGTCATGCTGCGGGGGAAGAAGGAGTCCACCA +
Preference number: 1 (lower is better)
Translates to: NDSITHGIASLLSEG*HKTGSCCGGRRSPP
Trigger: TGGTGGACTCCTTCTTCCCCCGCAGCATGACCCGGTTTTATGCCAACCTTCAGAAAGCAGTGAAGCAATTCCATGAGTAATGCTATCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR TCA 90 bp CCACTCCCAGGCAGCCCTACTTCTTTGCTTTGCCCAGCATTTTACTaGTTCATACATTATCTCACTTGTGCCAACACTCAAGAAGCAGGC +
Preference number: 1 (lower is better)
Translates to: PLPGSPTSLLCPAFY*FIHYLTCANTQEAG
Trigger: GCCTGCTTCTTGAGTGTTGGCACAAGTGAGATAATGTATGAATCAGTAAAATGCTGGGCAAAGCAAAGAAGTAGGGCTGCCTGGGAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR TCA 90 bp GTGTACAGTAAATGGCTTATCCAGCTGGTGAGTGATGCGGCAGATTaGGTTTTCTTCTGTGATTCGGTGGAGACTATCAGCCCAAGATGC +
Preference number: 1 (lower is better)
Translates to: VYSKWLIQLVSDAAD*VFFCDSVETISPRC
Trigger: GCATCTTGGGCTGATAGTCTCCACCGAATCACAGAAGAAAACTCAATCTGCCGCATCACTCACCAGCTGGATAAGCCATTTACTGTACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR GCA 90 bp AGACTATCAGCCCAAGATGCTTTAAGTGCACAACATTACAGGGAATaGCTGAGTGCCTGGCCAAAGGGATATTTGGTTTGGCCATCTCTG +
Preference number: 1 (lower is better)
Translates to: RLSAQDALSAQHYRE*LSAWPKGYLVWPSL
Trigger: CAGAGATGGCCAAACCAAATATCCCTTTGGCCAGGCACTCAGGCATTCCCTGTAATGTTGTGCACTTAAAGCATCTTGGGCTGATAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR GCA 90 bp TTCTTCTGTGATTCGGTGGAGACTATCAGCCCAAGATGCTTTAAGTaGACAACATTACAGGGAATGCCTGAGTGCCTGGCCAAAGGGATA +
Preference number: 1 (lower is better)
Translates to: FFCDSVETISPRCFK*TTLQGMPECLAKGI
Trigger: TATCCCTTTGGCCAGGCACTCAGGCATTCCCTGTAATGTTGTGCACTTAAAGCATCTTGGGCTGATAGTCTCCACCGAATCACAGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CCA 90 bp ACATTTATTTTTCTCATGAATCTGCAATGTGGGCAGAGATTGGAATaGGCAGCTCATCTCTGTCCCACTTGGCATCAGCTGGCGTCATGC +
Preference number: 1 (lower is better)
Translates to: TFIFLMNLQCGQRLE*AAHLCPTWHQLASC
Trigger: GCATGACGCCAGCTGATGCCAAGTGGGACAGAGATGAGCTGCCCATTCCAATCTCTGCCCACATTGCAGATTCATGAGAAAAATAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR TCA 90 bp TCAAAGCGTGGACAGGTGTGCCGACAGAAGGAACCAGCGTGTATATaGGGGTATCAAATAAAATTGCTACTACTTACCTACCACATGCCA +
Preference number: 1 (lower is better)
Translates to: SKRGQVCRQKEPACI*GYQIKLLLLTYHMP
Trigger: TGGCATGTGGTAGGTAAGTAGTAGCAATTTTATTTGATACCCTCATATACACGCTGGTTCCTTCTGTCGGCACACCTGTCCACGCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR GCA 90 bp TTCTATTCATCTCAAGGAATAATGGGCTTAGAGCAGTTTCTGTCCTaGTGGTTAACTTGTTTGGCCTATTCCATTCTGGATTTTGTCAAG +
Preference number: 1 (lower is better)
Translates to: FYSSQGIMGLEQFLS*WLTCLAYSILDFVK
Trigger: CTTGACAAAATCCAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGACAGAAACTGCTCTAAGCCCATTATTCCTTGAGATGAATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR GCA 90 bp GGTGGGCTGCCGCCTCTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTTGGGCCTGGGTCTACCCTaGCAGGAGAGGCGTGTTTGG +
Preference number: 2 (lower is better)
Translates to: GGLPPLVGILRDAQSISLGLGLP*QERRVW
Trigger: CCAAACACGCCTCTCCTGGCAGGGTAGACCCAGGCC...CAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAGCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR GCA 90 bp CCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACCCTGCCAGGAGAGGCGTGCCTTGGTGCCAGAGTaGATCGCATGGTGTCCAGGC +
Preference number: 2 (lower is better)
Translates to: PSLCQMVRGLGLPCQERRALVPE*IAWCPG
Trigger: GCCTGGACACCATGCGATGCACTCTGGCACCAAGGC...ACGCCTCTCCTGGCAGGGTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR CCA 90 bp CCAGCATCCCTTGACCAGGCCTGGGCCAGAGTATTGGTCTCCTCTCAGCCCCTGCCAGAGTGCATCGCATaGTGTCCAGGCCGAGTCTCT +
Preference number: 2 (lower is better)
Translates to: PASLDQAWARVLVSSQPLPECIA*CPGRVS
Trigger: AGAGACTCGGCCTGGACACCATGCGATGCACTCTGG...CAGGGGCTGAGAGGAGACCAATACTCTGGCCCAGGCCTGGTCAAGGGATGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp GCTGGGAACTCACCTGGGGCTGCTGGCCTGAATGCTTATAGGTGGCCTCTCCTTTGCTCCCAGGCTCCTTaGTGTCCCAACAGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: AGNSPGAAGLNAYRWPLLCSQAP*CPNSWS
Trigger: GCTCCAGCTGTTGGGACACCAAGGAGCCTGGGAGCA...AAGGAGAGGCCACCTATAAGCATTCAGGCCAGCAGCCCCAGGTGAGTTCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp CGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACCCGTCCACCACGTTCTGTaGGAGGTAACCGCTGAGGTC +
Preference number: 2 (lower is better)
Translates to: RMVSRPSLCQMVRGLGLPVHHVL*EVTAEV
Trigger: GACCTCAGCGGTTACCTCCCACAGAACGTGGTGGAC...GGGTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR CAA 90 bp CTGCCGCCTCTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTaGTTCCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCC +
Preference number: 2 (lower is better)
Translates to: LPPLVGILRDAQSIS*FQRVNTGLCVLPGS
Trigger: GGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGGAACAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR TCA 90 bp GGTGGGCTGCCGCCTCTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTTGGCTTGTTCCAAAGAGTaGACACAGGCCTCTGCGTGC +
Preference number: 2 (lower is better)
Translates to: GGLPPLVGILRDAQSISLACSKE*TQASAC
Trigger: GCACGCAGAGGCCTGTGTTCACTCTTTGGAACAAGC...CAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR TCA 90 bp CTGCCGCCTCTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTTGTTCCAAATCACACGCCAACCCTaGGTGGGGCAGGAGGCAGGA +
Preference number: 2 (lower is better)
Translates to: LPPLVGILRDAQSISLFQITRQP*VGQEAG
Trigger: TCCTGCCTCCTGCCCCACTCAGGGTTGGCGTGTGAT...TTGGAACAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR TCA 90 bp CATAAAACCGGGTCATGCTGCGGGGGAAGAAGGAGTCCACCACGTTCTGTGGGAGCTGGAGCTCCTCGATaGGTCACGGGAGTTCTTTGC +
Preference number: 2 (lower is better)
Translates to: HKTGSCCGGRRSPPRSVGAGAPR*VTGVLC
Trigger: GCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGC...TCCCACAGAACGTGGTGGACTCCTTCTTCCCCCGCAGCATGACCCGGTTTTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR-3UTR CCA 90 bp CTGCCGCCTCTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTTGTTCCAATGCTCCCAGGCTCCTTaGTGTCCCAACAGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: LPPLVGILRDAQSISLFQCSQAP*CPNSWS
Trigger: GCTCCAGCTGTTGGGACACCAAGGAGCCTGGGAGCA...TTGGAACAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR CCA 90 bp CGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACCCCAGGAGAGGCGTGTTTaGGTAACAGGCAGATGGAGT +
Preference number: 2 (lower is better)
Translates to: RMVSRPSLCQMVRGLGLPQERRV*VTGRWS
Trigger: ACTCCATCTGCCTGTTACCCAAACACGCCTCTCCTG...GGGTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR CCA 90 bp CGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACCCACAGTCAGGGAAACGTaGTCTCTGAGAGTGATGGGC +
Preference number: 2 (lower is better)
Translates to: RMVSRPSLCQMVRGLGLPTVRET*SLRVMG
Trigger: GCCCATCACTCTCAGAGACCACGTTTCCCTGACTGT...GGGTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR CCA 90 bp GCCTTGGTGCCAGAGTGCATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGAACGGATGCTCCACATaGGTGGCGTTGGAACTGATG +
Preference number: 2 (lower is better)
Translates to: ALVPECIAWCPGRVSVRWNGCST*VALELM
Trigger: CATCAGTTCCAACGCCACCCATGTGGAGCATCCGTT...CCATCTGACAGAGACTCGGCCTGGACACCATGCGATGCACTCTGGCACCAAGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR CAA 90 bp CTACCCTGCCAGGAGAGGCGTGTTTGGGTAACAGGCAGATGGAGTTaGGAACACATGAATGGCTCATCACACGCCAACCCTGAGTGGGGC +
Preference number: 2 (lower is better)
Translates to: LPCQERRVWVTGRWS*EHMNGSSHANPEWG
Trigger: GCCCCACTCAGGGTTGGCGTGTGATGAGCCATTCATGTGTTCCAAACTCCATCTGCCTGTTACCCAAACACGCCTCTCCTGGCAGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR TCA 90 bp GAACACATGAATGGCTCATCACACGCCAACCCTGAGTGGGGCAGGAGGCAGGAAGCTTGTTCCAAAGAGTaGACACAGGCCTCTGCGTGC +
Preference number: 2 (lower is better)
Translates to: EHMNGSSHANPEWGRRQEACSKE*TQASAC
Trigger: GCACGCAGAGGCCTGTGTTCACTCTTTGGAACAAGC...TTCCTGCCTCCTGCCCCACTCAGGGTTGGCGTGTGATGAGCCATTCATGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR GCA 90 bp AGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTTGCCAAGAAGTAACGATAGCGCAGGAAGGGTGGGCTaGCGCCTCTGGTTGGCATTC +
Preference number: 2 (lower is better)
Translates to: SWSSSMSHGSSLPRSNDSAGRVG*RLWLAF
Trigger: GAATGCCAACCAGAGGCGGCAGCCCACCCTTCCTGC...GCTATCGTTACTTCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR GCA 90 bp GTCGGTATGGAAGAATGTGACCAGGTTGGTCTTGGTGGGTTCCCCTGGAAGAGGGGGGGACATAACGGATaGTCCACATGGGTGGCGTTG +
Preference number: 2 (lower is better)
Translates to: VGMEECDQVGLGGFPWKRGGHNG*STWVAL
Trigger: CAACGCCACCCATGTGGAGCATCCGTTATGTCCCCC...CCTCTTCCAGGGGAACCCACCAAGACCAACCTGGTCACATTCTTCCATACCGAC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR-3UTR CCA 90 bp TTGTTCCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCTGGTGTCCCAACAGCTaGAGCTCCTCGATGAGTCAC +
Preference number: 2 (lower is better)
Translates to: LFQRVNTGLCVLPGSLVSWCPNS*SSSMSH
Trigger: GTGACTCATCGAGGAGCTCCAGCTGTTGGGACACCA...GGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGGAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR CCA 90 bp TGGTGTCCCAACAGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTTGCCAAGAGCTGCCGCCTCTGGTTaGCATTCTCAGAGATGCGCA +
Preference number: 2 (lower is better)
Translates to: WCPNSWSSSMSHGSSLPRAAASG*HSQRCA
Trigger: TGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAGC...TCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCTGTTGGGACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR CCA 90 bp CCAGCATCCCTTGACCAGGCCTGGGCCAGAGTATTGGTCTCCTCTCAGCCCCTGTTTGGAACACATGAATaGCTCATCACACGCCAACCC +
Preference number: 2 (lower is better)
Translates to: PASLDQAWARVLVSSQPLFGTHE*LITRQP
Trigger: GGGTTGGCGTGTGATGAGCCATTCATGTGTTCCAAA...CAGGGGCTGAGAGGAGACCAATACTCTGGCCCAGGCCTGGTCAAGGGATGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp TTGTTCCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCAGATGGTTAGAGGCCTaGGTCTACCCTGCCAGGAGA +
Preference number: 2 (lower is better)
Translates to: LFQRVNTGLCVLPGSLVSRWLEA*VYPARR
Trigger: TCTCCTGGCAGGGTAGACCCAGGCCTCTAACCATCT...GGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGGAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR CCA 90 bp GGTGGGCTGCCGCCTCTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTTGAAAGGCAACAGGGCCTaGTTTTCAGTGGCGATGATG +
Preference number: 2 (lower is better)
Translates to: GGLPPLVGILRDAQSISLKGNRA*FSVAMM
Trigger: CATCATCGCCACTGAAAACCAGGCCCTGTTGCCTTT...CAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAGCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR CAA 90 bp CAAAGGCTGGGACCACGTGAGATCATTCACTCATACATCTGGCCGTaGATGTTGGCTGGGAACTCACCTGGGGCTGCTGGCCTGAATGCT +
Preference number: 2 (lower is better)
Translates to: QRLGPREIIHSYIWP*MLAGNSPGAAGLNA
Trigger: AGCATTCAGGCCAGCAGCCCCAGGTGAGTTCCCAGCCAACATCAACGGCCAGATGTATGAGTGAATGATCTCACGTGGTCCCAGCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR TCA 90 bp GCAATGTGGGCAGAGATTGGAATGGGCAGCTCATCTCTGTCCCACTTGGCATCAGCTGGAGCTCCTCGATaGGTCACGGGAGTTCTTTGC +
Preference number: 2 (lower is better)
Translates to: AMWAEIGMGSSSLSHLASAGAPR*VTGVLC
Trigger: GCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGC...TGATGCCAAGTGGGACAGAGATGAGCTGCCCATTCCAATCTCTGCCCACATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR TCA 90 bp ATGGGCAGCTCATCTCTGTCCCACTTGGCATCAGCTGGCGTCATGCAAAGTCATGCTGCAGCACAGGACTaGGGGAGCGGTACATGCTTA +
Preference number: 2 (lower is better)
Translates to: MGSSSLSHLASAGVMQSHAAAQD*GSGTCL
Trigger: TAAGCATGTACCGCTCCCTCAGTCCTGTGCTGCAGC...ATGACTTTGCATGACGCCAGCTGATGCCAAGTGGGACAGAGATGAGCTGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR GCA 90 bp AAGGGTGGTGGAGCCAGTAAACAGAGGAGTACAGGTGAAGCACCAAGCTCAAAGGCCTTGGTGCCAGAGTaGATCGCATGGTGTCCAGGC +
Preference number: 2 (lower is better)
Translates to: KGGGASKQRSTGEAPSSKALVPE*IAWCPG
Trigger: GCCTGGACACCATGCGATGCACTCTGGCACCAAGGC...CTTTGAGCTTGGTGCTTCACCTGTACTCCTCTGTTTACTGGCTCCACCACCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp ATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACCGAGTCTCTGTCAGATaGTTAGAGGCCTGGGTCTAC +
Preference number: 2 (lower is better)
Translates to: IAWCPGRVSVRWLEAWVYRVSVR*LEAWVY
Trigger: GTAGACCCAGGCCTCTAACCATCTGACAGAGACTCG...GTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR CCA 90 bp ATGGGCAGCTCATCTCTGTCCCACTTGGCATCAGCTGGCGTCATGCAAAGTCATCCTCTCCTTGTGGCCTaGGCCTCCTCACAACATGGT +
Preference number: 2 (lower is better)
Translates to: MGSSSLSHLASAGVMQSHPLLVA*ASSQHG
Trigger: ACCATGTTGTGAGGAGGCCCAGGCCACAAGGAGAGG...ATGACTTTGCATGACGCCAGCTGATGCCAAGTGGGACAGAGATGAGCTGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp CTTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACACACAGGGTGTCAGTGATTGGCAGCGGAGGGAGTaGAGGTTCTGCTTACACACA +
Preference number: 2 (lower is better)
Translates to: LHGSGGSGGSAYTQGVSDWQRRE*RFCLHT
Trigger: TGTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCCA...ATCACTGACACCCTGTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325346.6
ENST00000560156.1
3UTR CAA 90 bp CTGGGACCACGTGAGATCATTCACTCATACATCTGGCCGTTGATGTaGGCTGGGAACTCACCTGGGGCTGCTGGCCTGAATGCTTATAGG +
Preference number: 2 (lower is better)
Translates to: LGPREIIHSYIWPLM*AGNSPGAAGLNAYR
Trigger: CCTATAAGCATTCAGGCCAGCAGCCCCAGGTGAGTTCCCAGCCAACATCAACGGCCAGATGTATGAGTGAATGATCTCACGTGGTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR TCA 90 bp GCCTTGGTGCCAGAGTGCATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGGATGATGATTCTCTATaGCAGTCAGGGAAACGTGGT +
Preference number: 2 (lower is better)
Translates to: ALVPECIAWCPGRVSVRWDDDSL*QSGKRG
Trigger: ACCACGTTTCCCTGACTGTCATAGAGAATCATCATC...CCATCTGACAGAGACTCGGCCTGGACACCATGCGATGCACTCTGGCACCAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR CCA 90 bp TGGTGTCCCAACAGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTTGCCAAGACGAGTCTCTGTCAGATaGTTAGAGGCCTGGGTCTAC +
Preference number: 2 (lower is better)
Translates to: WCPNSWSSSMSHGSSLPRRVSVR*LEAWVY
Trigger: GTAGACCCAGGCCTCTAACCATCTGACAGAGACTCG...TCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCTGTTGGGACACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR CCA 90 bp GCCTTGGTGCCAGAGTGCATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTCAGAAAAATATATTTaGGGGGCTGCAGCACAGGAC +
Preference number: 2 (lower is better)
Translates to: ALVPECIAWCPGRVSVRWSEKYI*GAAAQD
Trigger: GTCCTGTGCTGCAGCCCCCCAAATATATTTTTCTGA...CCATCTGACAGAGACTCGGCCTGGACACCATGCGATGCACTCTGGCACCAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR CCA 90 bp CCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCCAACACTGCTTTCTGAAGGTTaGCATAAAACCGGGTCATGC +
Preference number: 2 (lower is better)
Translates to: PKSEHRPLRAPRLLGVPTLLSEG*HKTGSC
Trigger: GCATGACCCGGTTTTATGCCAACCTTCAGAAAGCAG...TGTTGGGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR-3UTR TCA 90 bp GCTGGGAACTCACCTGGGGCTGCTGGCCTGAATGCTTATAGGTGGCCTCTCCTTCATGTTAATGTAATCTaGTGGCTTCTCCAGGGTCCA +
Preference number: 2 (lower is better)
Translates to: AGNSPGAAGLNAYRWPLLHVNVI*WLLQGP
Trigger: TGGACCCTGGAGAAGCCATCAGATTACATTAACATG...AAGGAGAGGCCACCTATAAGCATTCAGGCCAGCAGCCCCAGGTGAGTTCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp CCTGGGGTACCAAGAGACTCCTTGAGAGACCAGGCAAAGCAAGTGATTGGGACAGGCTGGCCTTCCACTTaGCTACACAGGGATGTACAA +
Preference number: 2 (lower is better)
Translates to: PGVPRDSLRDQAKQVIGTGWPST*LHRDVQ
Trigger: TTGTACATCCCTGTGTAGCCAAGTGGAAGGCCAGCC...TGTCCCAATCACTTGCTTTGCCTGGTCTCTCAAGGAGTCTCTTGGTACCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp ATGGGCAGCTCATCTCTGTCCCACTTGGCATCAGCTGGCGTCATGCAAAGTCATGCTGGGGAAGTCCTCTaGGTAGGAATCAGCAAGAAG +
Preference number: 2 (lower is better)
Translates to: MGSSSLSHLASAGVMQSHAGEVL*VGISKK
Trigger: CTTCTTGCTGATTCCTACCCAGAGGACTTCCCCAGC...ATGACTTTGCATGACGCCAGCTGATGCCAAGTGGGACAGAGATGAGCTGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR TCA 90 bp AAGGGTGGTGGAGCCAGTAAACAGAGGAGTACAGGTGAAGCACCAAGCTCAAAGCTGACCAGTTTAACCTaGTGCAGTCACGTGGAGGAG +
Preference number: 2 (lower is better)
Translates to: KGGGASKQRSTGEAPSSKLTSLT*CSHVEE
Trigger: CTCCTCCACGTGACTGCATCAGGTTAAACTGGTCAG...CTTTGAGCTTGGTGCTTCACCTGTACTCCTCTGTTTACTGGCTCCACCACCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR GCA 90 bp ATGGGCAGCTCATCTCTGTCCCACTTGGCATCAGCTGGCGTCATGCAAAGTCATCACATAAAGCCTTGGTaGCAGAGTGCATCGCATGGT +
Preference number: 2 (lower is better)
Translates to: MGSSSLSHLASAGVMQSHHIKPW*QSASHG
Trigger: ACCATGCGATGCACTCTGGCACCAAGGCTTTATGTG...ATGACTTTGCATGACGCCAGCTGATGCCAAGTGGGACAGAGATGAGCTGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp GAGATAGGGAAAGAAAGTTGCACGGCTGCTGAGGCCCCTTCTAGGTGGCAAGGCCAGATTCACACTGTCTaGTTTCACCGAGGACATGAA +
Preference number: 2 (lower is better)
Translates to: EIGKESCTAAEAPSRWQGQIHTV*FHRGHE
Trigger: TTCATGTCCTCGGTGAAACCAGACAGTGTGAATCTG...GCCTTGCCACCTAGAAGGGGCCTCAGCAGCCGTGCAACTTTCTTTCCCTATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp GCCTTGGTGCCAGAGTGCATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGGTGTCAGTGATGCTTTaGATAATTTCAAAACCGGTC +
Preference number: 2 (lower is better)
Translates to: ALVPECIAWCPGRVSVRWVSVML*IISKPV
Trigger: GACCGGTTTTGAAATTATCCAAAGCATCACTGACAC...CCATCTGACAGAGACTCGGCCTGGACACCATGCGATGCACTCTGGCACCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR-3UTR TCA 90 bp GGCTTAGAGCAGTTTCTGTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGCAGAGAGGGCAGGCATaGAGTTTCCTTGGCTGGTGC +
Preference number: 2 (lower is better)
Translates to: GLEQFLSCWLTCLAYSILQRGQA*SFLGWC
Trigger: GCACCAGCCAAGGAAACTTCATGCCTGCCCTCTCTG...CAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGACAGAAACTGCTCTAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR TCA 90 bp AAGGGTGGTGGAGCCAGTAAACAGAGGAGTACAGGTGAAGCACCAAGCTCAAAGAGGGTCCACAGGAAGTaGAGAATCTGTTTCCCAGCA +
Preference number: 2 (lower is better)
Translates to: KGGGASKQRSTGEAPSSKRVHRK*RICFPA
Trigger: TGCTGGGAAACAGATTCTTCACTTCCTGTGGACCCT...CTTTGAGCTTGGTGCTTCACCTGTACTCCTCTGTTTACTGGCTCCACCACCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR GCA 90 bp AGGTCGGTATGGAAGAATGTGACCAGGTTGGTCTTGGTGGGTTCCCCTGGAAGATGGCATTCTCAGAGATaGGCAGTCCATCAGCTTGTT +
Preference number: 2 (lower is better)
Translates to: RSVWKNVTRLVLVGSPGRWHSQR*AVHQLV
Trigger: AACAAGCTGATGGACTGCGCATCTCTGAGAATGCCA...TCTTCCAGGGGAACCCACCAAGACCAACCTGGTCACATTCTTCCATACCGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR-3UTR CCA 90 bp ATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACTGGGTAACAGGCAGATaGAGTTTGGAACACATGAAT +
Preference number: 2 (lower is better)
Translates to: IAWCPGRVSVRWLEAWVYWVTGR*SLEHMN
Trigger: ATTCATGTGTTCCAAACTCCATCTGCCTGTTACCCA...GTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR GCA 90 bp TGGGCTGCCGCCTCTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTTGTTATGGAATTGCTTCACTaGTTTCTGAAGGTTGGCATA +
Preference number: 2 (lower is better)
Translates to: WAAASGWHSQRCAVHQLVMELLH*FLKVGI
Trigger: TATGCCAACCTTCAGAAAGCAGTGAAGCAATTCCAT...AACAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR-3UTR CCA 90 bp ATGATTCTCTATGACAGTCAGGGAAACGTGGTCTCTGAGAGTGATGGGCACATATGGTGTCCCAACAGCTaGAGCTCCTCGATGAGTCAC +
Preference number: 2 (lower is better)
Translates to: MILYDSQGNVVSESDGHIWCPNS*SSSMSH
Trigger: GTGACTCATCGAGGAGCTCCAGCTGTTGGGACACCA...TATGTGCCCATCACTCTCAGAGACCACGTTTCCCTGACTGTCATAGAGAATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR CCA 90 bp GTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGGATTTTGTCAAGCAGTAATGCAGGTGAGCCCATaGCCCTCCCAGTACCTCCTG +
Preference number: 2 (lower is better)
Translates to: VLLVNLFGLFHSGFCQAVMQVSP*PSQYLL
Trigger: CAGGAGGTACTGGGAGGGCCATGGGCTCACCTGCAT...TACTGCTTGACAAAATCCAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp AAGGGTGGTGGAGCCAGTAAACAGAGGAGTACAGGTGAAGCACCAAGCTCAAAGGACTCAAAACCCATCTaGGCTCCTAACCTTCCTGTA +
Preference number: 2 (lower is better)
Translates to: KGGGASKQRSTGEAPSSKDSKPI*APNLPV
Trigger: TACAGGAAGGTTAGGAGCCCAGATGGGTTTTGAGTC...CTTTGAGCTTGGTGCTTCACCTGTACTCCTCTGTTTACTGGCTCCACCACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp ATGATTCTCTATGACAGTCAGGGAAACGTGGTCTCTGAGAGTGATGGGCACATATGGCAGCGGAGGGAGTaGAGGTTCTGCTTACACACA +
Preference number: 2 (lower is better)
Translates to: MILYDSQGNVVSESDGHIWQRRE*RFCLHT
Trigger: TGTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCCA...TATGTGCCCATCACTCTCAGAGACCACGTTTCCCTGACTGTCATAGAGAATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR CAA 90 bp TCCACATGGGTGGCGTTGGAACTGATGGTCCCATCCTCATATCTCTaGACTAGCACCAAGTCCACAAAATCTCTGGGAGAAATGAGCTTC +
Preference number: 2 (lower is better)
Translates to: STWVALELMVPSSYL*TSTKSTKSLGEMSF
Trigger: GAAGCTCATTTCTCCCAGAGATTTTGTGGACTTGGTGCTAGTCAAGAGATATGAGGATGGGACCATCAGTTCCAACGCCACCCATGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR CAA 90 bp TGGTGTCCCAACAGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTaGCCAAGAAGTAACGATAGCATTACTCATGGAATTGCTTCACTG +
Preference number: 2 (lower is better)
Translates to: WCPNSWSSSMSHGSS*PRSNDSITHGIASL
Trigger: CAGTGAAGCAATTCCATGAGTAATGCTATCGTTACTTCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCTGTTGGGACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR-3UTR TCA 90 bp TCCACTCCCAGGCAGCCCTACTTCTTTGCTTTGCCCAGCATTTTACTGATTCATGGAGTTTGGAACACATaGATGGCTCATCACACGCCA +
Preference number: 2 (lower is better)
Translates to: STPRQPYFFALPSILLIHGVWNT*MAHHTP
Trigger: TGGCGTGTGATGAGCCATTCATGTGTTCCAAACTCC...ATGAATCAGTAAAATGCTGGGCAAAGCAAAGAAGTAGGGCTGCCTGGGAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR TCA 90 bp GGCTTAGAGCAGTTTCTGTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGTGGACATGGCCCCTGTaGGTTTGTACAGTCTTGCAG +
Preference number: 2 (lower is better)
Translates to: GLEQFLSCWLTCLAYSILWTWPL*VCTVLQ
Trigger: CTGCAAGACTGTACAAACTCACAGGGGCCATGTCCA...CAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGACAGAAACTGCTCTAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR TCA 90 bp ATGGGCAGCTCATCTCTGTCCCACTTGGCATCAGCTGGCGTCATGCAAAGTCATGAACTCATGAGAAGTTaGTATAGAACAGTGCTTGCC +
Preference number: 2 (lower is better)
Translates to: MGSSSLSHLASAGVMQSHELMRS*YRTVLA
Trigger: GGCAAGCACTGTTCTATATCAACTTCTCATGAGTTC...ATGACTTTGCATGACGCCAGCTGATGCCAAGTGGGACAGAGATGAGCTGCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp GTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGGATTTTGTCAAGCAGTAGTGGGCTGCCGCCTCTaGTTGGCATTCTCAGAGATG +
Preference number: 2 (lower is better)
Translates to: VLLVNLFGLFHSGFCQAVVGCRL*LAFSEM
Trigger: CATCTCTGAGAATGCCAACCAGAGGCGGCAGCCCAC...TACTGCTTGACAAAATCCAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp ATGGGCAGCTCATCTCTGTCCCACTTGGCATCAGCTGGCGTCATGCAAAGTCATAGCTTCTACGGTGTATaGTTCTGTGCCAATGTATTG +
Preference number: 2 (lower is better)
Translates to: MGSSSLSHLASAGVMQSHSFYGV*FCANVL
Trigger: CAATACATTGGCACAGAACCATACACCGTAGAAGCT...ATGACTTTGCATGACGCCAGCTGATGCCAAGTGGGACAGAGATGAGCTGCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CAA 90 bp ACAGTGACATTTATTTTTCTCATGAATCTGCAATGTGGGCAGAGATaGGAATGGGCAGCTCATCTCTGTCCCACTTGGCATCAGCTGGCG +
Preference number: 2 (lower is better)
Translates to: TVTFIFLMNLQCGQR*EWAAHLCPTWHQLA
Trigger: CGCCAGCTGATGCCAAGTGGGACAGAGATGAGCTGCCCATTCCAATCTCTGCCCACATTGCAGATTCATGAGAAAAATAAATGTCACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp GGCTTAGAGCAGTTTCTGTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGAGATGCATTCTTGGTTaGCTGGCCTTCCACTTGGCT +
Preference number: 2 (lower is better)
Translates to: GLEQFLSCWLTCLAYSILRCILG*LAFHLA
Trigger: AGCCAAGTGGAAGGCCAGCCAACCAAGAATGCATCT...CAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGACAGAAACTGCTCTAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp CGCAAGAGCCATGTAGAAGCTGCATCTTGTTTATACCTTTGCCTTGGAAGTTGCCCAAGTGGCAGAGCTTaGACTGGATGCATGTTTTCC +
Preference number: 2 (lower is better)
Translates to: RKSHVEAASCLYLCLGSCPSGRA*TGCMFS
Trigger: GGAAAACATGCATCCAGTCCAAGCTCTGCCACTTGG...GCAACTTCCAAGGCAAAGGTATAAACAAGATGCAGCTTCTACATGGCTCTTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp ATCTCTGGGAGAAATGAGCTTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACGTGTCAGTGATGCTTTaGATAATTTCAAAACCGGTC +
Preference number: 2 (lower is better)
Translates to: ISGRNELHGSGGSGGSAYVSVML*IISKPV
Trigger: GACCGGTTTTGAAATTATCCAAAGCATCACTGACAC...GTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAAGCTCATTTCTCCCAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325346.6
ENST00000560156.1
3UTR CAA 90 bp GAGCCATGTAGAAGCTGCATCTTGTTTATACCTTTGCCTTGGAAGTaGCATGGCATCACCTCCACCATACTCCATCAGTTAGAGCTGACA +
Preference number: 2 (lower is better)
Translates to: EPCRSCILFIPLPWK*HGITSTILHQLELT
Trigger: TGTCAGCTCTAACTGATGGAGTATGGTGGAGGTGATGCCATGCAACTTCCAAGGCAAAGGTATAAACAAGATGCAGCTTCTACATGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR GCA 90 bp GGGAGTGGAGGTTCTGCTTACACACAGGGTGTCAGTGATGCTTTGGATAATTTCGTCACGGGAGTTCTTTaGCAAGAAGTAACGATAGCA +
Preference number: 2 (lower is better)
Translates to: GSGGSAYTQGVSDALDNFVTGVL*QEVTIA
Trigger: TGCTATCGTTACTTCTTGGCAAAGAACTCCCGTGAC...GAAATTATCCAAAGCATCACTGACACCCTGTGTGTAAGCAGAACCTCCACTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR-3UTR GCA 90 bp AAGGGTGGTGGAGCCAGTAAACAGAGGAGTACAGGTGAAGCACCAAGCTCAAAGCCAAGATGCTTTAAGTaGACAACATTACAGGGAATG +
Preference number: 2 (lower is better)
Translates to: KGGGASKQRSTGEAPSSKPRCFK*TTLQGM
Trigger: CATTCCCTGTAATGTTGTGCACTTAAAGCATCTTGG...CTTTGAGCTTGGTGCTTCACCTGTACTCCTCTGTTTACTGGCTCCACCACCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp AAGGGTGGTGGAGCCAGTAAACAGAGGAGTACAGGTGAAGCACCAAGCTCAAAGGATTTTAGTCACACGTaGTCTTTCTTACAAGGAAGG +
Preference number: 2 (lower is better)
Translates to: KGGGASKQRSTGEAPSSKDFSHT*SFLQGR
Trigger: CCTTCCTTGTAAGAAAGACCACGTGTGACTAAAATC...CTTTGAGCTTGGTGCTTCACCTGTACTCCTCTGTTTACTGGCTCCACCACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp CGCAAGAGCCATGTAGAAGCTGCATCTTGTTTATACCTTTGCCTTGGAAGTTGCGGCCAAAGGGATATTTaGTTTGGCCATCTCTGGATG +
Preference number: 2 (lower is better)
Translates to: RKSHVEAASCLYLCLGSCGQRDI*FGHLWM
Trigger: CATCCAGAGATGGCCAAACCAAATATCCCTTTGGCC...GCAACTTCCAAGGCAAAGGTATAAACAAGATGCAGCTTCTACATGGCTCTTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CAA 90 bp AGTGATCACAGCAGCTTCTACGGTGTATGGTTCTGTGCCAATGTATaGATAAGAGGGCACACACTGTGTACAGTAAATGGCTTATCCAGC +
Preference number: 2 (lower is better)
Translates to: SDHSSFYGVWFCANV*IRGHTLCTVNGLSS
Trigger: GCTGGATAAGCCATTTACTGTACACAGTGTGTGCCCTCTTATCAATACATTGGCACAGAACCATACACCGTAGAAGCTGCTGTGATCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR TCA 90 bp TCCACTCCCAGGCAGCCCTACTTCTTTGCTTTGCCCAGCATTTTACTGATTCATGTTCAGAATCACTTCTaGGAACTCATCCCTAATGCT +
Preference number: 2 (lower is better)
Translates to: STPRQPYFFALPSILLIHVQNHF*ELIPNA
Trigger: AGCATTAGGGATGAGTTCTCAGAAGTGATTCTGAAC...ATGAATCAGTAAAATGCTGGGCAAAGCAAAGAAGTAGGGCTGCCTGGGAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR TCA 90 bp AAGGGTGGTGGAGCCAGTAAACAGAGGAGTACAGGTGAAGCACCAAGCTCAAAGGAACCAGCGTGTATATaGGGGTATCAAATAAAATTG +
Preference number: 2 (lower is better)
Translates to: KGGGASKQRSTGEAPSSKEPACI*GYQIKL
Trigger: CAATTTTATTTGATACCCTCATATACACGCTGGTTC...CTTTGAGCTTGGTGCTTCACCTGTACTCCTCTGTTTACTGGCTCCACCACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR GCA 90 bp GGCTTAGAGCAGTTTCTGTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGGTCACGGGAGTTCTTTaGCAAGAAGTAACGATAGCA +
Preference number: 2 (lower is better)
Translates to: GLEQFLSCWLTCLAYSILVTGVL*QEVTIA
Trigger: TGCTATCGTTACTTCTTGGCAAAGAACTCCCGTGAC...CAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGACAGAAACTGCTCTAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CAA 90 bp ACGGGAGTTCTTTGCCAAGAAGTAACGATAGCATTACTCATGGAATaGCTTCACTGCTTTCTGAAGGTTGGCATAAAACCGGGTCATGCT +
Preference number: 2 (lower is better)
Translates to: TGVLCQEVTIALLME*LHCFLKVGIKPGHA
Trigger: AGCATGACCCGGTTTTATGCCAACCTTCAGAAAGCAGTGAAGCAATTCCATGAGTAATGCTATCGTTACTTCTTGGCAAAGAACTCCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR-3UTR GCA 90 bp GTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGGATTTTGTCAAGCAGTATGGCATTCTCAGAGATaGGCAGTCCATCAGCTTGTT +
Preference number: 2 (lower is better)
Translates to: VLLVNLFGLFHSGFCQAVWHSQR*AVHQLV
Trigger: AACAAGCTGATGGACTGCGCATCTCTGAGAATGCCA...TACTGCTTGACAAAATCCAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp CGCAAGAGCCATGTAGAAGCTGCATCTTGTTTATACCTTTGCCTTGGAAGTTGCTCAGGCCATCATCAGTaGAGCCATGTTAATGTAATC +
Preference number: 2 (lower is better)
Translates to: RKSHVEAASCLYLCLGSCSGHHQ*SHVNVI
Trigger: GATTACATTAACATGGCTCCACTGATGATGGCCTGA...GCAACTTCCAAGGCAAAGGTATAAACAAGATGCAGCTTCTACATGGCTCTTGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp ATTCCATTCTGGATTTTGTCAAGCAGTAGACAAGCAATTAGACAAGAACTTGGAGGGCACATAAAGCCTTaGTGCCAGAGTGCATCGCAT +
Preference number: 2 (lower is better)
Translates to: IPFWILSSSRQAIRQELGGHIKP*CQSASH
Trigger: ATGCGATGCACTCTGGCACCAAGGCTTTATGTGCCC...TCCAAGTTCTTGTCTAATTGCTTGTCTACTGCTTGACAAAATCCAGAATGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp CGCAAGAGCCATGTAGAAGCTGCATCTTGTTTATACCTTTGCCTTGGAAGTTGCTGGCCTATTCCATTCTaGATTTTGTCAAGCAGTAGA +
Preference number: 2 (lower is better)
Translates to: RKSHVEAASCLYLCLGSCWPIPF*ILSSSR
Trigger: TCTACTGCTTGACAAAATCCAGAATGGAATAGGCCA...GCAACTTCCAAGGCAAAGGTATAAACAAGATGCAGCTTCTACATGGCTCTTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CAA 90 bp TCAAGGAATAATGGGCTTAGAGCAGTTTCTGTCCTGCTGGTTAACTaGTTTGGCCTATTCCATTCTGGATTTTGTCAAGCAGTAGACAAG +
Preference number: 2 (lower is better)
Translates to: SRNNGLRAVSVLLVN*FGLFHSGFCQAVDK
Trigger: CTTGTCTACTGCTTGACAAAATCCAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGACAGAAACTGCTCTAAGCCCATTATTCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CCA 90 bp ATTCCATTCTGGATTTTGTCAAGCAGTAGACAAGCAATTAGACAAGAACTTGGATGGGTAACAGGCAGATaGAGTTTGGAACACATGAAT +
Preference number: 2 (lower is better)
Translates to: IPFWILSSSRQAIRQELGWVTGR*SLEHMN
Trigger: ATTCATGTGTTCCAAACTCCATCTGCCTGTTACCCA...TCCAAGTTCTTGTCTAATTGCTTGTCTACTGCTTGACAAAATCCAGAATGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR TCA 72 bp TTTGGAACACATGAATGGCTCATCACACGCCAACCCTaGGTGGGGCAGGAGGCAGGAAGGGTGGGCTGCCGC +
Preference number: 3 (lower is better)
Translates to: FGTHEWLITRQP*VGQEAGRVGCR
Trigger: GCGGCAGCCCACCCTTCCTGCCTCCTGCCCCACTCAGGGTTGGCGTGTGATGAGCCATTCATGTGTTCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR CCA 72 bp TGCATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATaGTTAGAGGCCTGGGTCTACCCTGCCAGGAGAGGC +
Preference number: 3 (lower is better)
Translates to: CIAWCPGRVSVR*LEAWVYPARRG
Trigger: GCCTCTCCTGGCAGGGTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCGATGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR CCA 72 bp GTGGCCTCTCCTTGTGGCCTGGGCCTCCTCACAACATaGTGTCTGGATTCCCAGGATGAGCATCCCAGGATC +
Preference number: 3 (lower is better)
Translates to: VASPCGLGLLTT*CLDSQDEHPRI
Trigger: GATCCTGGGATGCTCATCCTGGGAATCCAGACACCATGTTGTGAGGAGGCCCAGGCCACAAGGAGAGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CAA 90 bp TGGTGTCCCAACAGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTTGCCAAGAGGCTGCCGCCTCTGGTaGGCATTCTCAGAGATGCGC +
Preference number: 3 (lower is better)
Translates to: WCPNSWSSSMSHGSSLPRGCRLW*AFSEMR
Trigger: GCGCATCTCTGAGAATGCCAACCAGAGGCGGCAGCC...TCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCTGTTGGGACACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR CAA 90 bp CCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCCAACACCAGGAGAGGCGTGTTaGGGTAACAGGCAGATGGAG +
Preference number: 3 (lower is better)
Translates to: PKSEHRPLRAPRLLGVPTPGEAC*GNRQME
Trigger: CTCCATCTGCCTGTTACCCAAACACGCCTCTCCTGG...TGTTGGGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR CAA 90 bp CCAGCATCCCTTGACCAGGCCTGGGCCAGAGTATTGGTCTCCTCTCAGCCCCTGTGTTCAAGAGCACACTaGGCCCAAGTGGCAGAGCTT +
Preference number: 3 (lower is better)
Translates to: PASLDQAWARVLVSSQPLCSRAH*AQVAEL
Trigger: AAGCTCTGCCACTTGGGCCAAGTGTGCTCTTGAACA...CAGGGGCTGAGAGGAGACCAATACTCTGGCCCAGGCCTGGTCAAGGGATGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR TCA 72 bp AGGCCTGGGCCAGAGTATTGGTCTCCTCTCAGCCCCTaGTCCTGTGAAGTAAGGATGTGGGGGAAGACCTGG +
Preference number: 3 (lower is better)
Translates to: RPGPEYWSPLSP*SCEVRMWGKTW
Trigger: CCAGGTCTTCCCCCACATCCTTACTTCACAGGATCAGGGGCTGAGAGGAGACCAATACTCTGGCCCAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CCA 72 bp CTCCTTGTGGCCTGGGCCTCCTCACAACATGGTGTCTaGATTCCCAGGATGAGCATCCCAGGATCGCAAGAG +
Preference number: 3 (lower is better)
Translates to: LLVAWASSQHGV*IPRMSIPGSQE
Trigger: CTCTTGCGATCCTGGGATGCTCATCCTGGGAATCCAGACACCATGTTGTGAGGAGGCCCAGGCCACAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CAA 90 bp CCAGCATCCCTTGACCAGGCCTGGGCCAGAGTATTGGTCTCCTCTCAGCCCCTGAGTCACGGGAGTTCTTaGCCAAGAAGTAACGATAGC +
Preference number: 3 (lower is better)
Translates to: PASLDQAWARVLVSSQPLSHGSS*PRSNDS
Trigger: GCTATCGTTACTTCTTGGCAAAGAACTCCCGTGACT...CAGGGGCTGAGAGGAGACCAATACTCTGGCCCAGGCCTGGTCAAGGGATGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR GCA 72 bp GGGTGGGCTGCCGCCTCTGGTTGGCATTCTCAGAGATaGGCAGTCCATCAGCTTGTTCCAAAGAGTGAACAC +
Preference number: 3 (lower is better)
Translates to: GWAAASGWHSQR*AVHQLVPKSEH
Trigger: GTGTTCACTCTTTGGAACAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAGCCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR GCA 72 bp AGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACCCTaGCAGGAGAGGCGTGTTTGGGTAACAGGCAGATGG +
Preference number: 3 (lower is better)
Translates to: SLCQMVRGLGLP*QERRVWVTGRW
Trigger: CCATCTGCCTGTTACCCAAACACGCCTCTCCTGGCAGGGTAGACCCAGGCCTCTAACCATCTGACAGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR GCA 72 bp GTGGTCTCTGAGAGTGATGGGCACATAAAGCCTTGGTaGCAGAGTGCATCGCATGGTGTCCAGGCCGAGTCT +
Preference number: 3 (lower is better)
Translates to: VVSESDGHIKPW*QSASHGVQAES
Trigger: AGACTCGGCCTGGACACCATGCGATGCACTCTGGCACCAAGGCTTTATGTGCCCATCACTCTCAGAGACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR GCA 72 bp GGATCCCTCTCTGGATTGGAGATAGGGAAAGAAAGTTaGACGGCTGCTGAGGCCCCTTCTAGGTGGCAAGGC +
Preference number: 3 (lower is better)
Translates to: GSLSGLEIGKES*TAAEAPSRWQG
Trigger: GCCTTGCCACCTAGAAGGGGCCTCAGCAGCCGTGCAACTTTCTTTCCCTATCTCCAATCCAGAGAGGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR GCA 72 bp CCTCTCACAAAACCTGGCTTCGGGGGACATAACGGATaGTCCACATGGGTGGCGTTGGAACTGATGGTCCCA +
Preference number: 3 (lower is better)
Translates to: PLTKPGFGGHNG*STWVALELMVP
Trigger: TGGGACCATCAGTTCCAACGCCACCCATGTGGAGCATCCGTTATGTCCCCCGAAGCCAGGTTTTGTGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR CCA 72 bp CATGCTGCGGGGGAAGAAGGAGTCCACCACGTTCTGTaGGAGGTAACCGCTGAGGTCGGTATGGAAGAATGT +
Preference number: 3 (lower is better)
Translates to: HAAGEEGVHHVL*EVTAEVGMEEC
Trigger: ACATTCTTCCATACCGACCTCAGCGGTTACCTCCCACAGAACGTGGTGGACTCCTTCTTCCCCCGCAGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR-3UTR CAA 90 bp GCTGGGAACTCACCTGGGGCTGCTGGCCTGAATGCTTATAGGTGGCCTCTCCTTGTACCAAGAGACTCCTaGAGAGACCAGGCAAAGCAA +
Preference number: 3 (lower is better)
Translates to: AGNSPGAAGLNAYRWPLLVPRDS*RDQAKQ
Trigger: TTGCTTTGCCTGGTCTCTCAAGGAGTCTCTTGGTAC...AAGGAGAGGCCACCTATAAGCATTCAGGCCAGCAGCCCCAGGTGAGTTCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR TCA 72 bp GGGCCTCCTCACAACATGGTGTCTGGATTCCCAGGATaGGCATCCCAGGATCGCAAGAGCCATGTAGAAGCT +
Preference number: 3 (lower is better)
Translates to: GPPHNMVSGFPG*ASQDRKSHVEA
Trigger: AGCTTCTACATGGCTCTTGCGATCCTGGGATGCTCATCCTGGGAATCCAGACACCATGTTGTGAGGAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR GCA 72 bp GCTCATCTCTGTCCCACTTGGCATCAGCTGGCGTCATaGAAAGTCATGCAAAGGCTGGGACCACGTGAGATC +
Preference number: 3 (lower is better)
Translates to: AHLCPTWHQLAS*KVMQRLGPREI
Trigger: GATCTCACGTGGTCCCAGCCTTTGCATGACTTTGCATGACGCCAGCTGATGCCAAGTGGGACAGAGATGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CCA 72 bp AATGGGCAGCTCATCTCTGTCCCACTTGGCATCAGCTaGCGTCATGCAAAGTCATGCAAAGGCTGGGACCAC +
Preference number: 3 (lower is better)
Translates to: NGQLISVPLGIS*RHAKSCKGWDH
Trigger: GTGGTCCCAGCCTTTGCATGACTTTGCATGACGCCAGCTGATGCCAAGTGGGACAGAGATGAGCTGCCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CAA 90 bp TGGGCTGCCGCCTCTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTTGTTGCGCAGTCCATCAGCTaGTTCCAAAGAGTGAACACA +
Preference number: 3 (lower is better)
Translates to: WAAASGWHSQRCAVHQLVAQSIS*FQRVNT
Trigger: TGTGTTCACTCTTTGGAACAAGCTGATGGACTGCGC...AACAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR CAA 90 bp ATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACGCGCAGTCCATCAGCTaGTTCCAAAGAGTGAACACA +
Preference number: 3 (lower is better)
Translates to: IAWCPGRVSVRWLEAWVYAQSIS*FQRVNT
Trigger: TGTGTTCACTCTTTGGAACAAGCTGATGGACTGCGC...GTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR CAA 90 bp AGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTTGCCAAGAAGTAACGATAGCCCAGGAGAGGCGTGTTaGGGTAACAGGCAGATGGAG +
Preference number: 3 (lower is better)
Translates to: SWSSSMSHGSSLPRSNDSPGEAC*GNRQME
Trigger: CTCCATCTGCCTGTTACCCAAACACGCCTCTCCTGG...GCTATCGTTACTTCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR GCA 72 bp TCACTGCTTTCTGAAGGTTGGCATAAAACCGGGTCATaGTGCGGGGGAAGAAGGAGTCCACCACGTTCTGTG +
Preference number: 3 (lower is better)
Translates to: SLLSEGWHKTGS*CGGRRSPPRSV
Trigger: CACAGAACGTGGTGGACTCCTTCTTCCCCCGCAGCATGACCCGGTTTTATGCCAACCTTCAGAAAGCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR CCA 72 bp AGAGGCCTGGGTCTACCCTGCCAGGAGAGGCGTGTTTaGGTAACAGGCAGATGGAGTTTGGAACACATGAAT +
Preference number: 3 (lower is better)
Translates to: RGLGLPCQERRV*VTGRWSLEHMN
Trigger: ATTCATGTGTTCCAAACTCCATCTGCCTGTTACCCAAACACGCCTCTCCTGGCAGGGTAGACCCAGGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR TCA 72 bp AGGCTCCTTGGTGTCCCAACAGCTGGAGCTCCTCGATaGGTCACGGGAGTTCTTTGCCAAGAAGTAACGATA +
Preference number: 3 (lower is better)
Translates to: RLLGVPTAGAPR*VTGVLCQEVTI
Trigger: TATCGTTACTTCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCTGTTGGGACACCAAGGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR TCA 72 bp TGGATGCCTGATTGCCAAGCTCAGGACCAGGCAATGTaGCTTTGCATCAGCAACAACCAGCATCCCTTGACC +
Preference number: 3 (lower is better)
Translates to: WMPDCQAQDQAM*LCISNNQHPLT
Trigger: GGTCAAGGGATGCTGGTTGTTGCTGATGCAAAGTCACATTGCCTGGTCCTGAGCTTGGCAATCAGGCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR GCA 72 bp CTGGCCAAAGGGATATTTGGTTTGGCCATCTCTGGATaGCTGATTGCCAAGCTCAGGACCAGGCAATGTGAC +
Preference number: 3 (lower is better)
Translates to: LAKGIFGLAISG*LIAKLRTRQCD
Trigger: GTCACATTGCCTGGTCCTGAGCTTGGCAATCAGGCATCCAGAGATGGCCAAACCAAATATCCCTTTGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CCA 72 bp GGGTCCACAGGAAGTGAAGAATCTGTTTCCCAGCAGTaGACTCAAAACCCATCTGGGCTCCTAACCTTCCTG +
Preference number: 3 (lower is better)
Translates to: GSTGSEESVSQQ*TQNPSGLLTFL
Trigger: CAGGAAGGTTAGGAGCCCAGATGGGTTTTGAGTCCACTGCTGGGAAACAGATTCTTCACTTCCTGTGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CCA 72 bp GATCATTCACTCATACATCTGGCCGTTGATGTTGGCTaGGAACTCACCTGGGGCTGCTGGCCTGAATGCTTA +
Preference number: 3 (lower is better)
Translates to: DHSLIHLAVDVG*ELTWGCWPECL
Trigger: TAAGCATTCAGGCCAGCAGCCCCAGGTGAGTTCCCAGCCAACATCAACGGCCAGATGTATGAGTGAATGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CCA 72 bp GGCATCAGCTGGCGTCATGCAAAGTCATGCAAAGGCTaGGACCACGTGAGATCATTCACTCATACATCTGGC +
Preference number: 3 (lower is better)
Translates to: GISWRHAKSCKG*DHVRSFTHTSG
Trigger: GCCAGATGTATGAGTGAATGATCTCACGTGGTCCCAGCCTTTGCATGACTTTGCATGACGCCAGCTGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CCA 72 bp CAGAGATTGGAATGGGCAGCTCATCTCTGTCCCACTTaGCATCAGCTGGCGTCATGCAAAGTCATGCAAAGG +
Preference number: 3 (lower is better)
Translates to: QRLEWAAHLCPT*HQLASCKVMQR
Trigger: CCTTTGCATGACTTTGCATGACGCCAGCTGATGCCAAGTGGGACAGAGATGAGCTGCCCATTCCAATCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CAA 90 bp TGGTGTCCCAACAGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTTGCCAAGAAGTCACGGGAGTTCTTaGCCAAGAAGTAACGATAGC +
Preference number: 3 (lower is better)
Translates to: WCPNSWSSSMSHGSSLPRSHGSS*PRSNDS
Trigger: GCTATCGTTACTTCTTGGCAAAGAACTCCCGTGACT...TCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCTGTTGGGACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR-3UTR CAA 90 bp GCTGGGAACTCACCTGGGGCTGCTGGCCTGAATGCTTATAGGTGGCCTCTCCTTTGCTGGTTAACTTGTTaGGCCTATTCCATTCTGGAT +
Preference number: 3 (lower is better)
Translates to: AGNSPGAAGLNAYRWPLLCWLTC*AYSILD
Trigger: ATCCAGAATGGAATAGGCCAAACAAGTTAACCAGCA...AAGGAGAGGCCACCTATAAGCATTCAGGCCAGCAGCCCCAGGTGAGTTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CAA 90 bp ATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACGGTGTCAGTGATGCTTaGGATAATTTCAAAACCGGT +
Preference number: 3 (lower is better)
Translates to: IAWCPGRVSVRWLEAWVYGVSDA*DNFKTG
Trigger: ACCGGTTTTGAAATTATCCAAAGCATCACTGACACC...GTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR GCA 72 bp AGGGCACATTCCTTGCCTGCACAAACTCACCATCTGTaGACGCAGTGGCCTTCCCTAAAATCAGGGAATTGT +
Preference number: 3 (lower is better)
Translates to: RAHSLPAQTHHL*TQWPSLKSGNC
Trigger: ACAATTCCCTGATTTTAGGGAAGGCCACTGCGTGCACAGATGGTGAGTTTGTGCAGGCAAGGAATGTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR GCA 72 bp GATTCGGTGGAGACTATCAGCCCAAGATGCTTTAAGTaGACAACATTACAGGGAATGCCTGAGTGCCTGGCC +
Preference number: 3 (lower is better)
Translates to: DSVETISPRCFK*TTLQGMPECLA
Trigger: GGCCAGGCACTCAGGCATTCCCTGTAATGTTGTGCACTTAAAGCATCTTGGGCTGATAGTCTCCACCGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CCA 72 bp GTATGGAGCTCAGAGAGGGCAGGCATGAAGTTTCCTTaGCTGGTGCACCTAGAATTGGCTGAACTCATGAGA +
Preference number: 3 (lower is better)
Translates to: VWSSERAGMKFP*LVHLELAELMR
Trigger: TCTCATGAGTTCAGCCAATTCTAGGTGCACCAGCCAAGGAAACTTCATGCCTGCCCTCTCTGAGCTCCATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CAA 90 bp AAGGGTGGTGGAGCCAGTAAACAGAGGAGTACAGGTGAAGCACCAAGCTCAAAGGGATCCCTCTCTGGATaGGAGATAGGGAAAGAAAGT +
Preference number: 3 (lower is better)
Translates to: KGGGASKQRSTGEAPSSKGSLSG*EIGKES
Trigger: ACTTTCTTTCCCTATCTCCAATCCAGAGAGGGATCC...CTTTGAGCTTGGTGCTTCACCTGTACTCCTCTGTTTACTGGCTCCACCACCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CAA 90 bp CTGGGAGAAATGAGCTTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACACACGGTGTCAGTGATGCTTaGGATAATTTCAAAACCGGT +
Preference number: 3 (lower is better)
Translates to: LGEMSFMAAEGVEVLLTHGVSDA*DNFKTG
Trigger: ACCGGTTTTGAAATTATCCAAAGCATCACTGACACC...GTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAAGCTCATTTCTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325346.6
ENST00000560156.1
3UTR TCA 72 bp GGCGTCATGCAAAGTCATGCAAAGGCTGGGACCACGTaGGATCATTCACTCATACATCTGGCCGTTGATGTT +
Preference number: 3 (lower is better)
Translates to: GVMQSHAKAGTT*DHSLIHLAVDV
Trigger: AACATCAACGGCCAGATGTATGAGTGAATGATCTCACGTGGTCCCAGCCTTTGCATGACTTTGCATGACGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CCA 72 bp AAGAGACTCCTTGAGAGACCAGGCAAAGCAAGTGATTaGGACAGAGGTTATCTGTCCCAGGTTATCTGGGCA +
Preference number: 3 (lower is better)
Translates to: KRLLERPGKASD*DRGYLSQVIWA
Trigger: TGCCCAGATAACCTGGGACAGATAACCTCTGTCCCAATCACTTGCTTTGCCTGGTCTCTCAAGGAGTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CCA 72 bp AGAATCTGTTTCCCAGCAGTGGACTCAAAACCCATCTaGGCTCCTAACCTTCCTGTAAACCCCTTTAGTGGC +
Preference number: 3 (lower is better)
Translates to: RICFPAVDSKPI*APNLPVNPFSG
Trigger: GCCACTAAAGGGGTTTACAGGAAGGTTAGGAGCCCAGATGGGTTTTGAGTCCACTGCTGGGAAACAGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CAA 90 bp ATTATCTCACTTGTGCCAACACTCAAGAAGCAGGCTACACTGACACTGGTATTCTGGCTGGCCTTCCACTaGGCTACACAGGGATGTACA +
Preference number: 3 (lower is better)
Translates to: IISLVPTLKKQATLTLVFWLAFH*ATQGCT
Trigger: TGTACATCCCTGTGTAGCCAAGTGGAAGGCCAGCCA...GAATACCAGTGTCAGTGTAGCCTGCTTCTTGAGTGTTGGCACAAGTGAGATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CAA 90 bp GCAATGTGGGCAGAGATTGGAATGGGCAGCTCATCTCTGTCCCACTTGGCATCACAATTAGACAAGAACTaGGAGGCACCATTTGTATCC +
Preference number: 3 (lower is better)
Translates to: AMWAEIGMGSSSLSHLASQLDKN*EAPFVS
Trigger: GGATACAAATGGTGCCTCCAAGTTCTTGTCTAATTG...TGATGCCAAGTGGGACAGAGATGAGCTGCCCATTCCAATCTCTGCCCACATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CCA 72 bp ATTACTCATGGAATTGCTTCACTGCTTTCTGAAGGTTaGCATAAAACCGGGTCATGCTGCGGGGGAAGAAGG +
Preference number: 3 (lower is better)
Translates to: ITHGIASLLSEG*HKTGSCCGGRR
Trigger: CCTTCTTCCCCCGCAGCATGACCCGGTTTTATGCCAACCTTCAGAAAGCAGTGAAGCAATTCCATGAGTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR-3UTR CAA 90 bp AAGGGTGGTGGAGCCAGTAAACAGAGGAGTACAGGTGAAGCACCAAGCTCAAAGATTCCATTCTGGATTTaGTCAAGCAGTAGACAAGCA +
Preference number: 3 (lower is better)
Translates to: KGGGASKQRSTGEAPSSKIPFWI*SSSRQA
Trigger: TGCTTGTCTACTGCTTGACAAAATCCAGAATGGAAT...CTTTGAGCTTGGTGCTTCACCTGTACTCCTCTGTTTACTGGCTCCACCACCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CAA 90 bp CGCAAGAGCCATGTAGAAGCTGCATCTTGTTTATACCTTTGCCTTGGAAGTTGCAAAGGGATATTTGGTTaGGCCATCTCTGGATGCCTG +
Preference number: 3 (lower is better)
Translates to: RKSHVEAASCLYLCLGSCKGIFG*AISGCL
Trigger: CAGGCATCCAGAGATGGCCAAACCAAATATCCCTTT...GCAACTTCCAAGGCAAAGGTATAAACAAGATGCAGCTTCTACATGGCTCTTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR TCA 72 bp AAATGGCTTATCCAGCTGGTGAGTGATGCGGCAGATTaGGTTTTCTTCTGTGATTCGGTGGAGACTATCAGC +
Preference number: 3 (lower is better)
Translates to: KWLIQLVSDAAD*VFFCDSVETIS
Trigger: GCTGATAGTCTCCACCGAATCACAGAAGAAAACTCAATCTGCCGCATCACTCACCAGCTGGATAAGCCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR GCA 72 bp TGCTTTAAGTGCACAACATTACAGGGAATGCCTGAGTaGCTGGCCAAAGGGATATTTGGTTTGGCCATCTCT +
Preference number: 3 (lower is better)
Translates to: CFKCTTLQGMPE*LAKGIFGLAIS
Trigger: AGAGATGGCCAAACCAAATATCCCTTTGGCCAGGCACTCAGGCATTCCCTGTAATGTTGTGCACTTAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CCA 72 bp TTAAGTGCACAACATTACAGGGAATGCCTGAGTGCCTaGCCAAAGGGATATTTGGTTTGGCCATCTCTGGAT +
Preference number: 3 (lower is better)
Translates to: LSAQHYRECLSA*PKGYLVWPSLD
Trigger: ATCCAGAGATGGCCAAACCAAATATCCCTTTGGCCAGGCACTCAGGCATTCCCTGTAATGTTGTGCACTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR GCA 72 bp TTCTTCTGTGATTCGGTGGAGACTATCAGCCCAAGATaGTTTAAGTGCACAACATTACAGGGAATGCCTGAG +
Preference number: 3 (lower is better)
Translates to: FFCDSVETISPR*FKCTTLQGMPE
Trigger: CTCAGGCATTCCCTGTAATGTTGTGCACTTAAAGCATCTTGGGCTGATAGTCTCCACCGAATCACAGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR GCA 72 bp AAGAGCCATGTAGAAGCTGCATCTTGTTTATACCTTTaGCTTGGAAGTTGCATGGCATCACCTCCACCATAC +
Preference number: 3 (lower is better)
Translates to: KSHVEAASCLYL*LGSCMASPPPY
Trigger: GTATGGTGGAGGTGATGCCATGCAACTTCCAAGGCAAAGGTATAAACAAGATGCAGCTTCTACATGGCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR GCA 72 bp ATGAGCATCCCAGGATCGCAAGAGCCATGTAGAAGCTaGATCTTGTTTATACCTTTGCCTTGGAAGTTGCAT +
Preference number: 3 (lower is better)
Translates to: MSIPGSQEPCRS*ILFIPLPWKLH
Trigger: ATGCAACTTCCAAGGCAAAGGTATAAACAAGATGCAGCTTCTACATGGCTCTTGCGATCCTGGGATGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CCA 72 bp GTGATGCGGCAGATTGAGTTTTCTTCTGTGATTCGGTaGAGACTATCAGCCCAAGATGCTTTAAGTGCACAA +
Preference number: 3 (lower is better)
Translates to: VMRQIEFSSVIR*RLSAQDALSAQ
Trigger: TTGTGCACTTAAAGCATCTTGGGCTGATAGTCTCCACCGAATCACAGAAGAAAACTCAATCTGCCGCATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CCA 72 bp CTGCATCTTGTTTATACCTTTGCCTTGGAAGTTGCATaGCATCACCTCCACCATACTCCATCAGTTAGAGCT +
Preference number: 3 (lower is better)
Translates to: LHLVYTFALEVA*HHLHHTPSVRA
Trigger: AGCTCTAACTGATGGAGTATGGTGGAGGTGATGCCATGCAACTTCCAAGGCAAAGGTATAAACAAGATGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CCA 72 bp CCATGTAGAAGCTGCATCTTGTTTATACCTTTGCCTTaGAAGTTGCATGGCATCACCTCCACCATACTCCAT +
Preference number: 3 (lower is better)
Translates to: PCRSCILFIPLP*KLHGITSTILH
Trigger: ATGGAGTATGGTGGAGGTGATGCCATGCAACTTCCAAGGCAAAGGTATAAACAAGATGCAGCTTCTACATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR TCA 72 bp GTTTTCTGTTTGGAGGAGCAAAGGCTGAGAACACTGTaGAAACATTTTGCGCGCACAATAGTAACCTGGGTA +
Preference number: 3 (lower is better)
Translates to: VFCLEEQRLRTL*KHFARTIVTWV
Trigger: TACCCAGGTTACTATTGTGCGCGCAAAATGTTTTCACAGTGTTCTCAGCCTTTGCTCCTCCAAACAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR TCA 72 bp GGACAGGTGTGCCGACAGAAGGAACCAGCGTGTATATaGGGGTATCAAATAAAATTGCTACTACTTACCTAC +
Preference number: 3 (lower is better)
Translates to: GQVCRQKEPACI*GYQIKLLLLTY
Trigger: GTAGGTAAGTAGTAGCAATTTTATTTGATACCCTCATATACACGCTGGTTCCTTCTGTCGGCACACCTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR-3UTR CAA 90 bp CGCAAGAGCCATGTAGAAGCTGCATCTTGTTTATACCTTTGCCTTGGAAGTTGCACTTGGAGGCACCATTaGTATCCACTTTTTAGACTT +
Preference number: 3 (lower is better)
Translates to: RKSHVEAASCLYLCLGSCTWRHH*YPLFRL
Trigger: AAGTCTAAAAAGTGGATACAAATGGTGCCTCCAAGT...GCAACTTCCAAGGCAAAGGTATAAACAAGATGCAGCTTCTACATGGCTCTTGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR TCA 72 bp TCTCACTTGTGCCAACACTCAAGAAGCAGGCTACACTaGCACTGGTATTCCTGCCTCCATATTTTCTTTAAA +
Preference number: 3 (lower is better)
Translates to: SHLCQHSRSRLH*HWYSCLHIFFK
Trigger: TTTAAAGAAAATATGGAGGCAGGAATACCAGTGTCAGTGTAGCCTGCTTCTTGAGTGTTGGCACAAGTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR TCA 72 bp GGCAGCCCTACTTCTTTGCTTTGCCCAGCATTTTACTaGTTCATACATTATCTCACTTGTGCCAACACTCAA +
Preference number: 3 (lower is better)
Translates to: GSPTSLLCPAFY*FIHYLTCANTQ
Trigger: TTGAGTGTTGGCACAAGTGAGATAATGTATGAATCAGTAAAATGCTGGGCAAAGCAAAGAAGTAGGGCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR TCA 72 bp ACATTGAAGATGAACATAATCTACCAACGAAAGACGTaGTTCAATTCAACACTCCCTTCCCATGACCCAGGC +
Preference number: 3 (lower is better)
Translates to: TLKMNIIYQRKT*FNSTLPSHDPG
Trigger: GCCTGGGTCATGGGAAGGGAGTGTTGAATTGAATCACGTCTTTCGTTGGTAGATTATGTTCATCTTCAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR GCA 72 bp TCTCAAGGAATAATGGGCTTAGAGCAGTTTCTGTCCTaGTGGTTAACTTGTTTGGCCTATTCCATTCTGGAT +
Preference number: 3 (lower is better)
Translates to: SQGIMGLEQFLS*WLTCLAYSILD
Trigger: ATCCAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGACAGAAACTGCTCTAAGCCCATTATTCCTTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CCA 72 bp AACAGTGACATTTATTTTTCTCATGAATCTGCAATGTaGGCAGAGATTGGAATGGGCAGCTCATCTCTGTCC +
Preference number: 3 (lower is better)
Translates to: NSDIYFSHESAM*AEIGMGSSSLS
Trigger: GGACAGAGATGAGCTGCCCATTCCAATCTCTGCCCACATTGCAGATTCATGAGAAAAATAAATGTCACTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GAGCTTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACACACAGGGTGTCAGTGGGAGAGGAGGCGCTTaGGGGCTTCTGGGGACCCGG +
Preference number: 4 (lower is better)
Translates to: ELHGSGGSGGSAYTQGVSGRGGA*GLLGTR
Trigger: CCGGGTCCCCAGAAGCCCCCAAGCGCCTCCTCTCCC...ACTGACACCCTGTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560156.1
CDS-3UTR TCA 90 bp CCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCCAACAGGGCATAGATGCAGGTaGGCCCATGGCCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: PKSEHRPLRAPRLLGVPTGHRCR*AHGPPS
Trigger: ACTGGGAGGGCCATGGGCTCACCTGCATCTATGCCC...TGTTGGGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp CTGCCGCCTCTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTTGTTCCAAACAGCCTCGCTCATCTaGGCTGCCAGCGCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: LPPLVGILRDAQSISLFQTASLI*AASAGS
Trigger: GGACCCGGCGCTGGCAGCCCAGATGAGCGAGGCTGT...TTGGAACAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CCA 90 bp GCCTTGGTGCCAGAGTGCATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGGTGTCCCGCCGGTACTaGAGCATCTTCTCGGCCACA +
Preference number: 4 (lower is better)
Translates to: ALVPECIAWCPGRVSVRWVSRRY*SIFSAT
Trigger: TGTGGCCGAGAAGATGCTCCAGTACCGGCGGGACAC...CCATCTGACAGAGACTCGGCCTGGACACCATGCGATGCACTCTGGCACCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CCA 90 bp GAGATAGGGAAAGAAAGTTGCACGGCTGCTGAGGCCCCTTCTAGGTGGCAAGGCGGCCTGGCCAGGGCCTaGAAGACAGAGACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: EIGKESCTAAEAPSRWQGGLARA*KTETSC
Trigger: GCAGGAGGTCTCTGTCTTCCAGGCCCTGGCCAGGCC...GCCTTGCCACCTAGAAGGGGCCTCAGCAGCCGTGCAACTTTCTTTCCCTATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp GCCTTGGTGCCAGAGTGCATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGGCAAATCTTCCAGCCTaGTGTGTCCCGCCGGTACTG +
Preference number: 4 (lower is better)
Translates to: ALVPECIAWCPGRVSVRWANLPA*CVPPVL
Trigger: CAGTACCGGCGGGACACAGCAGGCTGGAAGATTTGC...CCATCTGACAGAGACTCGGCCTGGACACCATGCGATGCACTCTGGCACCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CCA 90 bp GTCCACAAAATCTCTGGGAGAAATGAGCTTCATGGCAGCGGAGGGAGTGGAGGTACAGCCTCGCTCATCTaGGCTGCCAGCGCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: VHKISGRNELHGSGGSGGTASLI*AASAGS
Trigger: GGACCCGGCGCTGGCAGCCCAGATGAGCGAGGCTGT...ACCTCCACTCCCTCCGCTGCCATGAAGCTCATTTCTCCCAGAGATTTTGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325346.6
ENST00000560156.1
CDS-3UTR CCA 90 bp CCAGCATCCCTTGACCAGGCCTGGGCCAGAGTATTGGTCTCCTCTCAGCCCCTGCCAGGTTGGTCTTGGTaGGTTCCCCTGGAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: PASLDQAWARVLVSSQPLPGWSW*VPLEEV
Trigger: AACCTCTTCCAGGGGAACCCACCAAGACCAACCTGG...CAGGGGCTGAGAGGAGACCAATACTCTGGCCCAGGCCTGGTCAAGGGATGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp CCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCCAACATGCTCCCAGGCTCCTTaGTGTCCCAACAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PKSEHRPLRAPRLLGVPTCSQAP*CPNSWS
Trigger: GCTCCAGCTGTTGGGACACCAAGGAGCCTGGGAGCA...TGTTGGGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CCA 90 bp GCCTTGGTGCCAGAGTGCATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGGTGGGCTGCCGCCTCTaGTTGGCATTCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: ALVPECIAWCPGRVSVRWVGCRL*LAFSEM
Trigger: CATCTCTGAGAATGCCAACCAGAGGCGGCAGCCCAC...CCATCTGACAGAGACTCGGCCTGGACACCATGCGATGCACTCTGGCACCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CCA 90 bp CCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACCCTGCCAGGAGAGGCGTCCAGAGTGCATCGCATaGTGTCCAGGCCGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PSLCQMVRGLGLPCQERRPECIA*CPGRVS
Trigger: AGAGACTCGGCCTGGACACCATGCGATGCACTCTGG...ACGCCTCTCCTGGCAGGGTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CCA 90 bp GGTGGGCTGCCGCCTCTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTTGTCCCTTGACCAGGCCTaGGCCAGAGTATTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GGLPPLVGILRDAQSISLSLDQA*ARVLVS
Trigger: GGAGACCAATACTCTGGCCCAGGCCTGGTCAAGGGA...CAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAGCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GAGATAGGGAAAGAAAGTTGCACGGCTGCTGAGGCCCCTTCTAGGTGGCAAGGCGGTGGCCTCTCCTTGTaGCCTGGGCCTCCTCACAAC +
Preference number: 4 (lower is better)
Translates to: EIGKESCTAAEAPSRWQGGGLSL*PGPPHN
Trigger: GTTGTGAGGAGGCCCAGGCCACAAGGAGAGGCCACC...GCCTTGCCACCTAGAAGGGGCCTCAGCAGCCGTGCAACTTTCTTTCCCTATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GTCCACAAAATCTCTGGGAGAAATGAGCTTCATGGCAGCGGAGGGAGTGGAGGTTATGAGCGGCGGCGCTaGATCCCGGGTGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: VHKISGRNELHGSGGSGGYERRR*IPGAWR
Trigger: CCTCCAGGCACCCGGGATCCAGCGCCGCCGCTCATA...ACCTCCACTCCCTCCGCTGCCATGAAGCTCATTTCTCCCAGAGATTTTGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR CAA 72 bp GGGCAAGGAGGCCACGTGATGTGGAGGGCACATTCCTaGCCTGCACAAACTCACCATCTGTGCACGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GQGGHVMWRAHS*PAQTHHLCTQW
Trigger: CCACTGCGTGCACAGATGGTGAGTTTGTGCAGGCAAGGAATGTGCCCTCCACATCACGTGGCCTCCTTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp CCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACCCTGCCAGGAGAGGCGTGGGTGGCGTTGGAACTaGTGGTCCCATCCTCATATC +
Preference number: 4 (lower is better)
Translates to: PSLCQMVRGLGLPCQERRGWRWN*WSHPHI
Trigger: GATATGAGGATGGGACCATCAGTTCCAACGCCACCC...ACGCCTCTCCTGGCAGGGTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR TCA 90 bp CCAGCATCCCTTGACCAGGCCTGGGCCAGAGTATTGGTCTCCTCTCAGCCCCTGCGGTATGGAAGAATGTaGCCAGGTTGGTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PASLDQAWARVLVSSQPLRYGRM*PGWSWW
Trigger: CCACCAAGACCAACCTGGTCACATTCTTCCATACCG...CAGGGGCTGAGAGGAGACCAATACTCTGGCCCAGGCCTGGTCAAGGGATGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp GCTGGGAACTCACCTGGGGCTGCTGGCCTGAATGCTTATAGGTGGCCTCTCCTTGCTGGAGCTCCTCGATaGGTCACGGGAGTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: AGNSPGAAGLNAYRWPLLAGAPR*VTGVLC
Trigger: GCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGC...AAGGAGAGGCCACCTATAAGCATTCAGGCCAGCAGCCCCAGGTGAGTTCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp TTGTTCCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCCTGGGGCTGCTGGCCTaGATGCTTATAGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LFQRVNTGLCVLPGSLVSLGLLA*MLIGGL
Trigger: GAGGCCACCTATAAGCATTCAGGCCAGCAGCCCCAG...GGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGGAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp GTCCACAAAATCTCTGGGAGAAATGAGCTTCATGGCAGCGGAGGGAGTGGAGGTCTCGCTCATCTGGGCTaGCAGCGCCGGGTCCATTGC +
Preference number: 4 (lower is better)
Translates to: VHKISGRNELHGSGGSGGLAHLG*QRRVHC
Trigger: GCAATGGACCCGGCGCTGGCAGCCCAGATGAGCGAG...ACCTCCACTCCCTCCGCTGCCATGAAGCTCATTTCTCCCAGAGATTTTGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325346.6
ENST00000560156.1
CDS-3UTR GCA 90 bp CCTCAGAGTATGGAGCTCAGAGAGGGCAGGCATGAAGTTTCCTTGGCTGGTGCAGCAGGAAGGGTGGGCTaGCGCCTCTGGTTGGCATTC +
Preference number: 4 (lower is better)
Translates to: PQSMELREGRHEVSLAGAAGRVG*RLWLAF
Trigger: GAATGCCAACCAGAGGCGGCAGCCCACCCTTCCTGC...TGCACCAGCCAAGGAAACTTCATGCCTGCCCTCTCTGAGCTCCATACTCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp ATGAGCTTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACACACAGGGTGTCAGGCCTGGGTCTACCCTaGCAGGAGAGGCGTGTTTGG +
Preference number: 4 (lower is better)
Translates to: MSFMAAEGVEVLLTHRVSGLGLP*QERRVW
Trigger: CCAAACACGCCTCTCCTGGCAGGGTAGACCCAGGCC...TGACACCCTGTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAAGCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR GCA 90 bp GGCAGCGGAGGGAGTGGAGGTTCTGCTTACACACAGGGTGTCAGTGATGCTTTGGCCTTGGTGCCAGAGTaGATCGCATGGTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GSGGSGGSAYTQGVSDALALVPE*IAWCPG
Trigger: GCCTGGACACCATGCGATGCACTCTGGCACCAAGGC...CAAAGCATCACTGACACCCTGTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR GCA 90 bp CTTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACACACAGGGTGTCAGTGATGGAGCTGCGCTTAGCTaGGGGGTCGCGGGTGTTATG +
Preference number: 4 (lower is better)
Translates to: LHGSGGSGGSAYTQGVSDGAALS*GVAGVM
Trigger: CATAACACCCGCGACCCCGCAGCTAAGCGCAGCTCC...ATCACTGACACCCTGTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CCA 90 bp GAACACATGAATGGCTCATCACACGCCAACCCTGAGTGGGGCAGGAGGCAGGAAGTGTCCCGCCGGTACTaGAGCATCTTCTCGGCCACA +
Preference number: 4 (lower is better)
Translates to: EHMNGSSHANPEWGRRQEVSRRY*SIFSAT
Trigger: TGTGGCCGAGAAGATGCTCCAGTACCGGCGGGACAC...TTCCTGCCTCCTGCCCCACTCAGGGTTGGCGTGTGATGAGCCATTCATGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CCA 90 bp ATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACTGCTCCCAGGCTCCTTaGTGTCCCAACAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: IAWCPGRVSVRWLEAWVYCSQAP*CPNSWS
Trigger: GCTCCAGCTGTTGGGACACCAAGGAGCCTGGGAGCA...GTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CCA 90 bp CCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACCCTGCCAGGAGAGGCGTCACACTTGGCCCAAGTaGCAGAGCTTGGACTGGATG +
Preference number: 4 (lower is better)
Translates to: PSLCQMVRGLGLPCQERRHTWPK*QSLDWM
Trigger: CATCCAGTCCAAGCTCTGCCACTTGGGCCAAGTGTG...ACGCCTCTCCTGGCAGGGTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp TTGTTCCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCATGCAGGTGAGCCCATaGCCCTCCCAGTACCTCCTG +
Preference number: 4 (lower is better)
Translates to: LFQRVNTGLCVLPGSLVSMQVSP*PSQYLL
Trigger: CAGGAGGTACTGGGAGGGCCATGGGCTCACCTGCAT...GGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGGAACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GAACACATGAATGGCTCATCACACGCCAACCCTGAGTGGGGCAGGAGGCAGGAAGCCGTTGATGTTGGCTaGGAACTCACCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: EHMNGSSHANPEWGRRQEAVDVG*ELTWGC
Trigger: GCAGCCCCAGGTGAGTTCCCAGCCAACATCAACGGC...TTCCTGCCTCCTGCCCCACTCAGGGTTGGCGTGTGATGAGCCATTCATGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp ACCAAGTCCACAAAATCTCTGGGAGAAATGAGCTTCATGGCAGCGGAGGGAGTGGCGCTTGGGGGCTTCTaGGGACCCGGGCTCCACGAA +
Preference number: 4 (lower is better)
Translates to: TKSTKSLGEMSFMAAEGVALGGF*GPGLHE
Trigger: TTCGTGGAGCCCGGGTCCCCAGAAGCCCCCAAGCGC...CACTCCCTCCGCTGCCATGAAGCTCATTTCTCCCAGAGATTTTGTGGACTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560156.1
CDS-3UTR TCA 90 bp TCTACCCTGCCAGGAGAGGCGTGTTTGGGTAACAGGCAGATGGAGTTTGGAACAATCACACGCCAACCCTaGGTGGGGCAGGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: STLPGEACLGNRQMEFGTITRQP*VGQEAG
Trigger: TCCTGCCTCCTGCCCCACTCAGGGTTGGCGTGTGAT...TGTTCCAAACTCCATCTGCCTGTTACCCAAACACGCCTCTCCTGGCAGGGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR TCA 90 bp ATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACGCTGCAGCACAGGACTaGGGGAGCGGTACATGCTTA +
Preference number: 4 (lower is better)
Translates to: IAWCPGRVSVRWLEAWVYAAAQD*GSGTCL
Trigger: TAAGCATGTACCGCTCCCTCAGTCCTGTGCTGCAGC...GTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR TCA 90 bp GCTGGGAACTCACCTGGGGCTGCTGGCCTGAATGCTTATAGGTGGCCTCTCCTTTCTGGATTCCCAGGATaGGCATCCCAGGATCGCAAG +
Preference number: 4 (lower is better)
Translates to: AGNSPGAAGLNAYRWPLLSGFPG*ASQDRK
Trigger: CTTGCGATCCTGGGATGCTCATCCTGGGAATCCAGA...AAGGAGAGGCCACCTATAAGCATTCAGGCCAGCAGCCCCAGGTGAGTTCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp GGGAGTGGAGGTTCTGCTTACACACAGGGTGTCAGTGATGCTTTGGATAATTTCGGGTCGCGGGTGTTATaGGCGGCGGCGCTGGATCCC +
Preference number: 4 (lower is better)
Translates to: GSGGSAYTQGVSDALDNFGSRVL*AAALDP
Trigger: GGGATCCAGCGCCGCCGCTCATAACACCCGCGACCC...GAAATTATCCAAAGCATCACTGACACCCTGTGTGTAAGCAGAACCTCCACTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR GCA 90 bp AGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTTGCCAAGAAGTAACGATAGCCTCGCTCATCTGGGCTaGCAGCGCCGGGTCCATTGC +
Preference number: 4 (lower is better)
Translates to: SWSSSMSHGSSLPRSNDSLAHLG*QRRVHC
Trigger: GCAATGGACCCGGCGCTGGCAGCCCAGATGAGCGAG...GCTATCGTTACTTCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR GCA 90 bp ACCAAGTCCACAAAATCTCTGGGAGAAATGAGCTTCATGGCAGCGGAGGGAGTGCTCGCTCATCTGGGCTaGCAGCGCCGGGTCCATTGC +
Preference number: 4 (lower is better)
Translates to: TKSTKSLGEMSFMAAEGVLAHLG*QRRVHC
Trigger: GCAATGGACCCGGCGCTGGCAGCCCAGATGAGCGAG...CACTCCCTCCGCTGCCATGAAGCTCATTTCTCCCAGAGATTTTGTGGACTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325346.6
ENST00000560156.1
CDS-3UTR GCA 90 bp ATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACGGGGGACATAACGGATaGTCCACATGGGTGGCGTTG +
Preference number: 4 (lower is better)
Translates to: IAWCPGRVSVRWLEAWVYGGHNG*STWVAL
Trigger: CAACGCCACCCATGTGGAGCATCCGTTATGTCCCCC...GTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR GCA 90 bp CGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACCCCATAAAACCGGGTCATaGTGCGGGGGAAGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: RMVSRPSLCQMVRGLGLPHKTGS*CGGRRS
Trigger: ACTCCTTCTTCCCCCGCAGCATGACCCGGTTTTATG...GGGTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR GCA 90 bp GCAATGTGGGCAGAGATTGGAATGGGCAGCTCATCTCTGTCCCACTTGGCATCAGGCCTGGGTCTACCCTaGCAGGAGAGGCGTGTTTGG +
Preference number: 4 (lower is better)
Translates to: AMWAEIGMGSSSLSHLASGLGLP*QERRVW
Trigger: CCAAACACGCCTCTCCTGGCAGGGTAGACCCAGGCC...TGATGCCAAGTGGGACAGAGATGAGCTGCCCATTCCAATCTCTGCCCACATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp GAGATAGGGAAAGAAAGTTGCACGGCTGCTGAGGCCCCTTCTAGGTGGCAAGGCCTGGTTCTGATGATGTaGCTGGGTGGACATGGCCCC +
Preference number: 4 (lower is better)
Translates to: EIGKESCTAAEAPSRWQGLVLMM*LGGHGP
Trigger: GGGGCCATGTCCACCCAGGCACATCATCAGAACCAG...GCCTTGCCACCTAGAAGGGGCCTCAGCAGCCGTGCAACTTTCTTTCCCTATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp CCAGCATCCCTTGACCAGGCCTGGGCCAGAGTATTGGTCTCCTCTCAGCCCCTGCAGGGAATGCCTGAGTaGCTGGCCAAAGGGATATTT +
Preference number: 4 (lower is better)
Translates to: PASLDQAWARVLVSSQPLQGMPE*LAKGIF
Trigger: AAATATCCCTTTGGCCAGGCACTCAGGCATTCCCTG...CAGGGGCTGAGAGGAGACCAATACTCTGGCCCAGGCCTGGTCAAGGGATGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GGTGGGCTGCCGCCTCTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTTGCCGCTGAGGTCGGTATaGAAGAATGTGACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GGLPPLVGILRDAQSISLPLRSV*KNVTRL
Trigger: CAACCTGGTCACATTCTTCCATACCGACCTCAGCGG...CAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAGCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CCA 90 bp TGGGCTGCCGCCTCTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTTGTTGTCCACCACGTTCTGTaGGAGGTAACCGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: WAAASGWHSQRCAVHQLVVHHVL*EVTAEV
Trigger: GACCTCAGCGGTTACCTCCCACAGAACGTGGTGGAC...AACAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CCA 90 bp GAACACATGAATGGCTCATCACACGCCAACCCTGAGTGGGGCAGGAGGCAGGAAGCTGCCGCCTCTGGTTaGCATTCTCAGAGATGCGCA +
Preference number: 4 (lower is better)
Translates to: EHMNGSSHANPEWGRRQEAAASG*HSQRCA
Trigger: TGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAGC...TTCCTGCCTCCTGCCCCACTCAGGGTTGGCGTGTGATGAGCCATTCATGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CCA 90 bp CATAAAACCGGGTCATGCTGCGGGGGAAGAAGGAGTCCACCACGTTCTGTGGGAGCTGCCGCCTCTGGTTaGCATTCTCAGAGATGCGCA +
Preference number: 4 (lower is better)
Translates to: HKTGSCCGGRRSPPRSVGAAASG*HSQRCA
Trigger: TGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAGC...TCCCACAGAACGTGGTGGACTCCTTCTTCCCCCGCAGCATGACCCGGTTTTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CCA 90 bp GCTGGGAACTCACCTGGGGCTGCTGGCCTGAATGCTTATAGGTGGCCTCTCCTTAGATGGTTAGAGGCCTaGGTCTACCCTGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: AGNSPGAAGLNAYRWPLLRWLEA*VYPARR
Trigger: TCTCCTGGCAGGGTAGACCCAGGCCTCTAACCATCT...AAGGAGAGGCCACCTATAAGCATTCAGGCCAGCAGCCCCAGGTGAGTTCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GAGATAGGGAAAGAAAGTTGCACGGCTGCTGAGGCCCCTTCTAGGTGGCAAGGCGGAGGCCACGTGATGTaGAGGGCACATTCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: EIGKESCTAAEAPSRWQGGGHVM*RAHSLP
Trigger: AGGCAAGGAATGTGCCCTCCACATCACGTGGCCTCC...GCCTTGCCACCTAGAAGGGGCCTCAGCAGCCGTGCAACTTTCTTTCCCTATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GCCTTGGTGCCAGAGTGCATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGACCAAGCTCAAAGCGTaGACAGGTGTGCCGACAGAA +
Preference number: 4 (lower is better)
Translates to: ALVPECIAWCPGRVSVRWTKLKA*TGVPTE
Trigger: TTCTGTCGGCACACCTGTCCACGCTTTGAGCTTGGT...CCATCTGACAGAGACTCGGCCTGGACACCATGCGATGCACTCTGGCACCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp GAACACATGAATGGCTCATCACACGCCAACCCTGAGTGGGGCAGGAGGCAGGAAGGGTGGCGTTGGAACTaGTGGTCCCATCCTCATATC +
Preference number: 4 (lower is better)
Translates to: EHMNGSSHANPEWGRRQEGWRWN*WSHPHI
Trigger: GATATGAGGATGGGACCATCAGTTCCAACGCCACCC...TTCCTGCCTCCTGCCCCACTCAGGGTTGGCGTGTGATGAGCCATTCATGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR TCA 90 bp TGGTGTCCCAACAGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTTGCCAAGAGCTGCAGCACAGGACTaGGGGAGCGGTACATGCTTA +
Preference number: 4 (lower is better)
Translates to: WCPNSWSSSMSHGSSLPRAAAQD*GSGTCL
Trigger: TAAGCATGTACCGCTCCCTCAGTCCTGTGCTGCAGC...TCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCTGTTGGGACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR TCA 90 bp CCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCCAACATGGACATGGCCCCTGTaGGTTTGTACAGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: PKSEHRPLRAPRLLGVPTWTWPL*VCTVLQ
Trigger: CTGCAAGACTGTACAAACTCACAGGGGCCATGTCCA...TGTTGGGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp GAGATAGGGAAAGAAAGTTGCACGGCTGCTGAGGCCCCTTCTAGGTGGCAAGGCAAGACAGAGACCTCCTaGCTCCGCCTCAGTAAGACG +
Preference number: 4 (lower is better)
Translates to: EIGKESCTAAEAPSRWQGKTETS*LRLSKT
Trigger: CGTCTTACTGAGGCGGAGGCAGGAGGTCTCTGTCTT...GCCTTGCCACCTAGAAGGGGCCTCAGCAGCCGTGCAACTTTCTTTCCCTATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp TTGTTCCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCCTCTGGATGCCTGATTaGCAAGCTCAGGACCAGGCA +
Preference number: 4 (lower is better)
Translates to: LFQRVNTGLCVLPGSLVSLWMPD*QAQDQA
Trigger: TGCCTGGTCCTGAGCTTGGCAATCAGGCATCCAGAG...GGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGGAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp CCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACCCTGCCAGGAGAGGCGTCTTTGCCTTGGAAGTTaGATGGCATCACCTCCACCA +
Preference number: 4 (lower is better)
Translates to: PSLCQMVRGLGLPCQERRLCLGS*MASPPP
Trigger: TGGTGGAGGTGATGCCATGCAACTTCCAAGGCAAAG...ACGCCTCTCCTGGCAGGGTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp TCCACTCCCAGGCAGCCCTACTTCTTTGCTTTGCCCAGCATTTTACTGATTCATACAGCCTCGCTCATCTaGGCTGCCAGCGCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: STPRQPYFFALPSILLIHTASLI*AASAGS
Trigger: GGACCCGGCGCTGGCAGCCCAGATGAGCGAGGCTGT...ATGAATCAGTAAAATGCTGGGCAAAGCAAAGAAGTAGGGCTGCCTGGGAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GAGCTTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACACACAGGGTGTCAGTCCAGGTTGGTCTTGGTaGGTTCCCCTGGAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: ELHGSGGSGGSAYTQGVSPGWSW*VPLEEV
Trigger: AACCTCTTCCAGGGGAACCCACCAAGACCAACCTGG...ACTGACACCCTGTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CCA 90 bp TTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACACACAGGGTGTCAGTGATGGTCCACCACGTTCTGTaGGAGGTAACCGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: FMAAEGVEVLLTHRVSVMVHHVL*EVTAEV
Trigger: GACCTCAGCGGTTACCTCCCACAGAACGTGGTGGAC...CATCACTGACACCCTGTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CCA 90 bp GCTGGGAACTCACCTGGGGCTGCTGGCCTGAATGCTTATAGGTGGCCTCTCCTTCGAGTCTCTGTCAGATaGTTAGAGGCCTGGGTCTAC +
Preference number: 4 (lower is better)
Translates to: AGNSPGAAGLNAYRWPLLRVSVR*LEAWVY
Trigger: GTAGACCCAGGCCTCTAACCATCTGACAGAGACTCG...AAGGAGAGGCCACCTATAAGCATTCAGGCCAGCAGCCCCAGGTGAGTTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GAACACATGAATGGCTCATCACACGCCAACCCTGAGTGGGGCAGGAGGCAGGAACATCTCTGTCCCACTTaGCATCAGCTGGCGTCATGC +
Preference number: 4 (lower is better)
Translates to: EHMNGSSHANPEWGRRQEHLCPT*HQLASC
Trigger: GCATGACGCCAGCTGATGCCAAGTGGGACAGAGATG...TTCCTGCCTCCTGCCCCACTCAGGGTTGGCGTGTGATGAGCCATTCATGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp GTCGGTATGGAAGAATGTGACCAGGTTGGTCTTGGTGGGTTCCCCTGGAAGAGGGTGGGAGGTAACCGCTaGGGTCGGTATGGAAGAATG +
Preference number: 4 (lower is better)
Translates to: VGMEECDQVGLGGFPWKRVGGNR*GRYGRM
Trigger: CATTCTTCCATACCGACCTCAGCGGTTACCTCCCAC...CCTCTTCCAGGGGAACCCACCAAGACCAACCTGGTCACATTCTTCCATACCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR TCA 90 bp CCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCCAACAGGAGTTTGGAACACATaGATGGCTCATCACACGCCA +
Preference number: 4 (lower is better)
Translates to: PKSEHRPLRAPRLLGVPTGVWNT*MAHHTP
Trigger: TGGCGTGTGATGAGCCATTCATGTGTTCCAAACTCC...TGTTGGGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR GCA 90 bp GTCCACAAAATCTCTGGGAGAAATGAGCTTCATGGCAGCGGAGGGAGTGGAGGTGCAAATCTTCCAGCCTaGTGTGTCCCGCCGGTACTG +
Preference number: 4 (lower is better)
Translates to: VHKISGRNELHGSGGSGGANLPA*CVPPVL
Trigger: CAGTACCGGCGGGACACAGCAGGCTGGAAGATTTGC...ACCTCCACTCCCTCCGCTGCCATGAAGCTCATTTCTCCCAGAGATTTTGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325346.6
ENST00000560156.1
CDS-3UTR GCA 90 bp GAGCTTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACACACAGGGTGTCAGTCATAAAACCGGGTCATaGTGCGGGGGAAGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: ELHGSGGSGGSAYTQGVSHKTGS*CGGRRS
Trigger: ACTCCTTCTTCCCCCGCAGCATGACCCGGTTTTATG...ACTGACACCCTGTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR GCA 90 bp CCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCCAACATACTTACCTACCACATaGCAAGCACTGTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PKSEHRPLRAPRLLGVPTYLPTT*QALCSG
Trigger: CCCTGAGCACAGTGCTTGGCATGTGGTAGGTAAGTA...TGTTGGGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp ATGAGCTTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACACACAGGGTGTCATGGCAGCGGAGGGAGTaGAGGTTCTGCTTACACACA +
Preference number: 4 (lower is better)
Translates to: MSFMAAEGVEVLLTHRVSWQRRE*RFCLHT
Trigger: TGTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCCA...TGACACCCTGTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAAGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325346.6
ENST00000560156.1
CDS-3UTR CCA 90 bp ATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACCCGCTGAGGTCGGTATaGAAGAATGTGACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: IAWCPGRVSVRWLEAWVYPLRSV*KNVTRL
Trigger: CAACCTGGTCACATTCTTCCATACCGACCTCAGCGG...GTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CCA 90 bp GCCTTGGTGCCAGAGTGCATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGCTGCTTTCTGAAGGTTaGCATAAAACCGGGTCATGC +
Preference number: 4 (lower is better)
Translates to: ALVPECIAWCPGRVSVRWLLSEG*HKTGSC
Trigger: GCATGACCCGGTTTTATGCCAACCTTCAGAAAGCAG...CCATCTGACAGAGACTCGGCCTGGACACCATGCGATGCACTCTGGCACCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CCA 90 bp ATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACGGGCACATAAAGCCTTaGTGCCAGAGTGCATCGCAT +
Preference number: 4 (lower is better)
Translates to: IAWCPGRVSVRWLEAWVYGHIKP*CQSASH
Trigger: ATGCGATGCACTCTGGCACCAAGGCTTTATGTGCCC...GTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CCA 90 bp ATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACACAGTCAGGGAAACGTaGTCTCTGAGAGTGATGGGC +
Preference number: 4 (lower is better)
Translates to: IAWCPGRVSVRWLEAWVYTVRET*SLRVMG
Trigger: GCCCATCACTCTCAGAGACCACGTTTCCCTGACTGT...GTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CCA 90 bp TTGTTCCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCGGCTGGCCTTCCACTTaGCTACACAGGGATGTACAA +
Preference number: 4 (lower is better)
Translates to: LFQRVNTGLCVLPGSLVSGWPST*LHRDVQ
Trigger: TTGTACATCCCTGTGTAGCCAAGTGGAAGGCCAGCC...GGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGGAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp AGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTTGCCAAGAAGTAACGATAGCTCCCATGACCCAGGCTaGGCAAGGAGGCCACGTGAT +
Preference number: 4 (lower is better)
Translates to: SWSSSMSHGSSLPRSNDSSHDPG*ARRPRD
Trigger: ATCACGTGGCCTCCTTGCCCAGCCTGGGTCATGGGA...GCTATCGTTACTTCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GCTGGGAACTCACCTGGGGCTGCTGGCCTGAATGCTTATAGGTGGCCTCTCCTTTCTGTTTCCCAGCAGTaGACTCAAAACCCATCTGGG +
Preference number: 4 (lower is better)
Translates to: AGNSPGAAGLNAYRWPLLSVSQQ*TQNPSG
Trigger: CCCAGATGGGTTTTGAGTCCACTGCTGGGAAACAGA...AAGGAGAGGCCACCTATAAGCATTCAGGCCAGCAGCCCCAGGTGAGTTCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp TGGGCTGCCGCCTCTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTTGTTGGCCTCCTCACAACATaGTGTCTGGATTCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: WAAASGWHSQRCAVHQLVGLLTT*CLDSQD
Trigger: ATCCTGGGAATCCAGACACCATGTTGTGAGGAGGCC...AACAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp ATCTCTGGGAGAAATGAGCTTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACTCGGGTCCAGGGGATTaGGGAGCAGAAAACAACGGG +
Preference number: 4 (lower is better)
Translates to: ISGRNELHGSGGSGGSAYSGPGD*GAENNG
Trigger: CCCGTTGTTTTCTGCTCCCCAATCCCCTGGACCCGA...GTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAAGCTCATTTCTCCCAGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560156.1
CDS-3UTR TCA 90 bp CCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACCCTGCCAGGAGAGGCGTGATGATGATTCTCTATaGCAGTCAGGGAAACGTGGT +
Preference number: 4 (lower is better)
Translates to: PSLCQMVRGLGLPCQERRDDDSL*QSGKRG
Trigger: ACCACGTTTCCCTGACTGTCATAGAGAATCATCATC...ACGCCTCTCCTGGCAGGGTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR TCA 90 bp CCTCAGAGTATGGAGCTCAGAGAGGGCAGGCATGAAGTTTCCTTGGCTGGTGCATTCCCCATGCAGACATaGGTGCGTGCTCAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: PQSMELREGRHEVSLAGAFPMQT*VRAQFR
Trigger: TCTGAACTGAGCACGCACTCATGTCTGCATGGGGAA...TGCACCAGCCAAGGAAACTTCATGCCTGCCCTCTCTGAGCTCCATACTCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp TGGGCTGCCGCCTCTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTTGTTAGAGCTGACACAGGATaGAGGCAATGCCATCCTCAA +
Preference number: 4 (lower is better)
Translates to: WAAASGWHSQRCAVHQLVRADTG*RQCHPQ
Trigger: TTGAGGATGGCATTGCCTTCATCCTGTGTCAGCTCT...AACAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp TGGTGTCCCAACAGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTTGCCAAGATCTCCTCTCAGCCCCTaGTCCTGTGAAGTAAGGATG +
Preference number: 4 (lower is better)
Translates to: WCPNSWSSSMSHGSSLPRSPLSP*SCEVRM
Trigger: CATCCTTACTTCACAGGATCAGGGGCTGAGAGGAGA...TCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCTGTTGGGACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp GCCTTGGTGCCAGAGTGCATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGAGTGATGCGGCAGATTaGGTTTTCTTCTGTGATTCG +
Preference number: 4 (lower is better)
Translates to: ALVPECIAWCPGRVSVRWSDAAD*VFFCDS
Trigger: CGAATCACAGAAGAAAACTCAATCTGCCGCATCACT...CCATCTGACAGAGACTCGGCCTGGACACCATGCGATGCACTCTGGCACCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp CCTGGGGTACCAAGAGACTCCTTGAGAGACCAGGCAAAGCAAGTGATTGGGACAGGCTTATCCAGCTGGTaGGTGATGCGGCAGATTGAG +
Preference number: 4 (lower is better)
Translates to: PGVPRDSLRDQAKQVIGTGLSSW*VMRQIE
Trigger: CTCAATCTGCCGCATCACTCACCAGCTGGATAAGCC...TGTCCCAATCACTTGCTTTGCCTGGTCTCTCAAGGAGTCTCTTGGTACCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp GCCTTGGTGCCAGAGTGCATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGGTCACGGGAGTTCTTTaGCAAGAAGTAACGATAGCA +
Preference number: 4 (lower is better)
Translates to: ALVPECIAWCPGRVSVRWVTGVL*QEVTIA
Trigger: TGCTATCGTTACTTCTTGGCAAAGAACTCCCGTGAC...CCATCTGACAGAGACTCGGCCTGGACACCATGCGATGCACTCTGGCACCAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR GCA 90 bp GTTGGCATAAAACCGGGTCATGCTGCGGGGGAAGAAGGAGTCCACCACGTTCTGCACATAAAGCCTTGGTaGCAGAGTGCATCGCATGGT +
Preference number: 4 (lower is better)
Translates to: VGIKPGHAAGEEGVHHVLHIKPW*QSASHG
Trigger: ACCATGCGATGCACTCTGGCACCAAGGCTTTATGTG...CAGAACGTGGTGGACTCCTTCTTCCCCCGCAGCATGACCCGGTTTTATGCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CCA 90 bp ATCTCTGGGAGAAATGAGCTTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACTGGCAGCGGAGGGAGTaGAGGTTCTGCTTACACACA +
Preference number: 4 (lower is better)
Translates to: ISGRNELHGSGGSGGSAYWQRRE*RFCLHT
Trigger: TGTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCCA...GTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAAGCTCATTTCTCCCAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325346.6
ENST00000560156.1
CDS-3UTR CCA 90 bp TCTACCCTGCCAGGAGAGGCGTGTTTGGGTAACAGGCAGATGGAGTTTGGAACATGGTGTCCCAACAGCTaGAGCTCCTCGATGAGTCAC +
Preference number: 4 (lower is better)
Translates to: STLPGEACLGNRQMEFGTWCPNS*SSSMSH
Trigger: GTGACTCATCGAGGAGCTCCAGCTGTTGGGACACCA...TGTTCCAAACTCCATCTGCCTGTTACCCAAACACGCCTCTCCTGGCAGGGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CCA 90 bp ATGAGCTTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACACACAGGGTGTCACAGGAGAGGCGTGTTTaGGTAACAGGCAGATGGAGT +
Preference number: 4 (lower is better)
Translates to: MSFMAAEGVEVLLTHRVSQERRV*VTGRWS
Trigger: ACTCCATCTGCCTGTTACCCAAACACGCCTCTCCTG...TGACACCCTGTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAAGCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CCA 90 bp AGCGGAGGGAGTGGAGGTTCTGCTTACACACAGGGTGTCAGTGATGCTTTGGATAGATGGTTAGAGGCCTaGGTCTACCCTGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SGGSGGSAYTQGVSDALDRWLEA*VYPARR
Trigger: TCTCCTGGCAGGGTAGACCCAGGCCTCTAACCATCT...ATCCAAAGCATCACTGACACCCTGTGTGTAAGCAGAACCTCCACTCCCTCCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CCA 90 bp AGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTTGCCAAGAAGTAACGATAGCCCAGAGTGCATCGCATaGTGTCCAGGCCGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SWSSSMSHGSSLPRSNDSPECIA*CPGRVS
Trigger: AGAGACTCGGCCTGGACACCATGCGATGCACTCTGG...GCTATCGTTACTTCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CCA 90 bp TTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACACACAGGGTGTCAGTGATGGGGCACATAAAGCCTTaGTGCCAGAGTGCATCGCAT +
Preference number: 4 (lower is better)
Translates to: FMAAEGVEVLLTHRVSVMGHIKP*CQSASH
Trigger: ATGCGATGCACTCTGGCACCAAGGCTTTATGTGCCC...CATCACTGACACCCTGTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CCA 90 bp ATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACAAAGGCAACAGGGCCTaGTTTTCAGTGGCGATGATG +
Preference number: 4 (lower is better)
Translates to: IAWCPGRVSVRWLEAWVYKGNRA*FSVAMM
Trigger: CATCATCGCCACTGAAAACCAGGCCCTGTTGCCTTT...GTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CCA 90 bp GTTGGCATAAAACCGGGTCATGCTGCGGGGGAAGAAGGAGTCCACCACGTTCTGAAAGGCAACAGGGCCTaGTTTTCAGTGGCGATGATG +
Preference number: 4 (lower is better)
Translates to: VGIKPGHAAGEEGVHHVLKGNRA*FSVAMM
Trigger: CATCATCGCCACTGAAAACCAGGCCCTGTTGCCTTT...CAGAACGTGGTGGACTCCTTCTTCCCCCGCAGCATGACCCGGTTTTATGCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CCA 90 bp CGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACCCTCTTCTGTGATTCGGTaGAGACTATCAGCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: RMVSRPSLCQMVRGLGLPSSVIR*RLSAQD
Trigger: ATCTTGGGCTGATAGTCTCCACCGAATCACAGAAGA...GGGTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CAA 72 bp CTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTaGTTCCAAAGAGTGAACACAGGCCTCTGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: LVGILRDAQSIS*FQRVNTGLCVL
Trigger: GAGCACGCAGAGGCCTGTGTTCACTCTTTGGAACAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR TCA 90 bp AAGGGTGGTGGAGCCAGTAAACAGAGGAGTACAGGTGAAGCACCAAGCTCAAAGGTGGGAGGTAACCGCTaGGGTCGGTATGGAAGAATG +
Preference number: 4 (lower is better)
Translates to: KGGGASKQRSTGEAPSSKVGGNR*GRYGRM
Trigger: CATTCTTCCATACCGACCTCAGCGGTTACCTCCCAC...CTTTGAGCTTGGTGCTTCACCTGTACTCCTCTGTTTACTGGCTCCACCACCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp GGGTTCCCCTGGAAGAGGTTCACAGAAGCAACCACAAGGATGGTTAAATCCTCTGCTGGAGCTCCTCGATaGGTCACGGGAGTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: GFPWKRFTEATTRMVKSSAGAPR*VTGVLC
Trigger: GCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGC...AGAGGATTTAACCATCCTTGTGGTTGCTTCTGTGAACCTCTTCCAGGGGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR TCA 90 bp ATGATTCTCTATGACAGTCAGGGAAACGTGGTCTCTGAGAGTGATGGGCACATAATCACACGCCAACCCTaGGTGGGGCAGGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: MILYDSQGNVVSESDGHIITRQP*VGQEAG
Trigger: TCCTGCCTCCTGCCCCACTCAGGGTTGGCGTGTGAT...TATGTGCCCATCACTCTCAGAGACCACGTTTCCCTGACTGTCATAGAGAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR TCA 90 bp AGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTTGCCAAGAAGTAACGATAGCGTTTCACCGAGGACATaGAACTCCACCTTGCGGGGA +
Preference number: 4 (lower is better)
Translates to: SWSSSMSHGSSLPRSNDSVSPRT*NSTLRG
Trigger: TCCCCGCAAGGTGGAGTTTCATGTCCTCGGTGAAAC...GCTATCGTTACTTCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp GAGATAGGGAAAGAAAGTTGCACGGCTGCTGAGGCCCCTTCTAGGTGGCAAGGCAGGCTGAGAACACTGTaGAAACATTTTGCGCGCACA +
Preference number: 4 (lower is better)
Translates to: EIGKESCTAAEAPSRWQGRLRTL*KHFART
Trigger: TGTGCGCGCAAAATGTTTTCACAGTGTTCTCAGCCT...GCCTTGCCACCTAGAAGGGGCCTCAGCAGCCGTGCAACTTTCTTTCCCTATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp CCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACCCTGCCAGGAGAGGCGTTACCAACGAAAGACGTaGTTCAATTCAACACTCCCT +
Preference number: 4 (lower is better)
Translates to: PSLCQMVRGLGLPCQERRYQRKT*FNSTLP
Trigger: AGGGAGTGTTGAATTGAATCACGTCTTTCGTTGGTA...ACGCCTCTCCTGGCAGGGTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp GCAATGTGGGCAGAGATTGGAATGGGCAGCTCATCTCTGTCCCACTTGGCATCAATTACAGGGAATGCCTaGGTGCCTGGCCAAAGGGAT +
Preference number: 4 (lower is better)
Translates to: AMWAEIGMGSSSLSHLASITGNA*VPGQRD
Trigger: ATCCCTTTGGCCAGGCACTCAGGCATTCCCTGTAAT...TGATGCCAAGTGGGACAGAGATGAGCTGCCCATTCCAATCTCTGCCCACATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp ATGGGCAGCTCATCTCTGTCCCACTTGGCATCAGCTGGCGTCATGCAAAGTCATACAGAGGAGTACAGGTaGAGCACCAAGCTCAAAGCG +
Preference number: 4 (lower is better)
Translates to: MGSSSLSHLASAGVMQSHTEEYR*STKLKA
Trigger: CGCTTTGAGCTTGGTGCTTCACCTGTACTCCTCTGT...ATGACTTTGCATGACGCCAGCTGATGCCAAGTGGGACAGAGATGAGCTGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp TTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACACACAGGGTGTCAGTGATGCTCCTCGGTACCACCTaGAGTCATTGTGAGCATAAC +
Preference number: 4 (lower is better)
Translates to: FMAAEGVEVLLTHRVSVMLLGTT*SHCEHN
Trigger: GTTATGCTCACAATGACTTCAGGTGGTACCGAGGAG...CATCACTGACACCCTGTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560156.1
CDS-3UTR GCA 90 bp CTCTTGACTAGCACCAAGTCCACAAAATCTCTGGGAGAAATGAGCTTCATGGCAGCAGGAAGGGTGGGCTaGCGCCTCTGGTTGGCATTC +
Preference number: 4 (lower is better)
Translates to: LLTSTKSTKSLGEMSFMAAGRVG*RLWLAF
Trigger: GAATGCCAACCAGAGGCGGCAGCCCACCCTTCCTGC...TGCCATGAAGCTCATTTCTCCCAGAGATTTTGTGGACTTGGTGCTAGTCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR GCA 90 bp CCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCCAACAGCAGCCCTACTTCTTTaGTTTGCCCAGCATTTTACT +
Preference number: 4 (lower is better)
Translates to: PKSEHRPLRAPRLLGVPTAALLL*FAQHFT
Trigger: AGTAAAATGCTGGGCAAAGCAAAGAAGTAGGGCTGC...TGTTGGGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp ATGGGCAGCTCATCTCTGTCCCACTTGGCATCAGCTGGCGTCATGCAAAGTCATGGAGGGCACATTCCTTaGCTGCACAAACTCACCATC +
Preference number: 4 (lower is better)
Translates to: MGSSSLSHLASAGVMQSHGGHIP*LHKLTI
Trigger: GATGGTGAGTTTGTGCAGGCAAGGAATGTGCCCTCC...ATGACTTTGCATGACGCCAGCTGATGCCAAGTGGGACAGAGATGAGCTGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp AGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTTGCCAAGAAGTAACGATAGCTGGCAGCGGAGGGAGTaGAGGTTCTGCTTACACACA +
Preference number: 4 (lower is better)
Translates to: SWSSSMSHGSSLPRSNDSWQRRE*RFCLHT
Trigger: TGTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCCA...GCTATCGTTACTTCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CCA 90 bp GGTCTTGGTGGGTTCCCCTGGAAGAGGTTCACAGAAGCAACCACAAGGATGGTTCTTGGTGGGTTCCCCTaGAAGAGGTTCACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: GLGGFPWKRFTEATTRMVLGGFP*KRFTEA
Trigger: TGCTTCTGTGAACCTCTTCCAGGGGAACCCACCAAG...AACCATCCTTGTGGTTGCTTCTGTGAACCTCTTCCAGGGGAACCCACCAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CCA 90 bp AAGGGTGGTGGAGCCAGTAAACAGAGGAGTACAGGTGAAGCACCAAGCTCAAAGTGGTGTCCCAACAGCTaGAGCTCCTCGATGAGTCAC +
Preference number: 4 (lower is better)
Translates to: KGGGASKQRSTGEAPSSKWCPNS*SSSMSH
Trigger: GTGACTCATCGAGGAGCTCCAGCTGTTGGGACACCA...CTTTGAGCTTGGTGCTTCACCTGTACTCCTCTGTTTACTGGCTCCACCACCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GCAATGTGGGCAGAGATTGGAATGGGCAGCTCATCTCTGTCCCACTTGGCATCACAGGAGAGGCGTGTTTaGGTAACAGGCAGATGGAGT +
Preference number: 4 (lower is better)
Translates to: AMWAEIGMGSSSLSHLASQERRV*VTGRWS
Trigger: ACTCCATCTGCCTGTTACCCAAACACGCCTCTCCTG...TGATGCCAAGTGGGACAGAGATGAGCTGCCCATTCCAATCTCTGCCCACATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GGTCTTGGTGGGTTCCCCTGGAAGAGGTTCACAGAAGCAACCACAAGGATGGTTCGAGTCTCTGTCAGATaGTTAGAGGCCTGGGTCTAC +
Preference number: 4 (lower is better)
Translates to: GLGGFPWKRFTEATTRMVRVSVR*LEAWVY
Trigger: GTAGACCCAGGCCTCTAACCATCTGACAGAGACTCG...AACCATCCTTGTGGTTGCTTCTGTGAACCTCTTCCAGGGGAACCCACCAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CCA 90 bp GAACACATGAATGGCTCATCACACGCCAACCCTGAGTGGGGCAGGAGGCAGGAAGGCATGAAGTTTCCTTaGCTGGTGCACCTAGAATTG +
Preference number: 4 (lower is better)
Translates to: EHMNGSSHANPEWGRRQEGMKFP*LVHLEL
Trigger: CAATTCTAGGTGCACCAGCCAAGGAAACTTCATGCC...TTCCTGCCTCCTGCCCCACTCAGGGTTGGCGTGTGATGAGCCATTCATGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp CCTCAGAGTATGGAGCTCAGAGAGGGCAGGCATGAAGTTTCCTTGGCTGGTGCACCAAGTGGCAGAGCTTaGACTGGATGCATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: PQSMELREGRHEVSLAGAPSGRA*TGCMFS
Trigger: GGAAAACATGCATCCAGTCCAAGCTCTGCCACTTGG...TGCACCAGCCAAGGAAACTTCATGCCTGCCCTCTCTGAGCTCCATACTCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp CCTGGGGTACCAAGAGACTCCTTGAGAGACCAGGCAAAGCAAGTGATTGGGACAGCTGGGGAAGTCCTCTaGGTAGGAATCAGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: PGVPRDSLRDQAKQVIGTAGEVL*VGISKK
Trigger: CTTCTTGCTGATTCCTACCCAGAGGACTTCCCCAGC...TGTCCCAATCACTTGCTTTGCCTGGTCTCTCAAGGAGTCTCTTGGTACCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp ATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACGACTCAAAACCCATCTaGGCTCCTAACCTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: IAWCPGRVSVRWLEAWVYDSKPI*APNLPV
Trigger: TACAGGAAGGTTAGGAGCCCAGATGGGTTTTGAGTC...GTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp CGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACCCTCAGGCCATCATCAGTaGAGCCATGTTAATGTAATC +
Preference number: 4 (lower is better)
Translates to: RMVSRPSLCQMVRGLGLPSGHHQ*SHVNVI
Trigger: GATTACATTAACATGGCTCCACTGATGATGGCCTGA...GGGTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GGTGGGCTGCCGCCTCTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTTGAGCTTCTACGGTGTATaGTTCTGTGCCAATGTATTG +
Preference number: 4 (lower is better)
Translates to: GGLPPLVGILRDAQSISLSFYGV*FCANVL
Trigger: CAATACATTGGCACAGAACCATACACCGTAGAAGCT...CAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAGCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CAA 72 bp CAGGAGAGGCGTGTTTGGGTAACAGGCAGATGGAGTTaGGAACACATGAATGGCTCATCACACGCCAACCCT +
Preference number: 4 (lower is better)
Translates to: QERRVWVTGRWS*EHMNGSSHANP
Trigger: AGGGTTGGCGTGTGATGAGCCATTCATGTGTTCCAAACTCCATCTGCCTGTTACCCAAACACGCCTCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
3UTR CAA 72 bp GCAGAGATTGGAATGGGCAGCTCATCTCTGTCCCACTaGGCATCAGCTGGCGTCATGCAAAGTCATGCAAAG +
Preference number: 4 (lower is better)
Translates to: AEIGMGSSSLSH*ASAGVMQSHAK
Trigger: CTTTGCATGACTTTGCATGACGCCAGCTGATGCCAAGTGGGACAGAGATGAGCTGCCCATTCCAATCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp TCTCTGGGAGAAATGAGCTTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACAGGAGTTTGGAACACATaGATGGCTCATCACACGCCA +
Preference number: 4 (lower is better)
Translates to: SLGEMSFMAAEGVEVLLTGVWNT*MAHHTP
Trigger: TGGCGTGTGATGAGCCATTCATGTGTTCCAAACTCC...TGTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAAGCTCATTTCTCCCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR TCA 90 bp AGCTTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACACACAGGGTGTCAGTGGATGATGATTCTCTATaGCAGTCAGGGAAACGTGGT +
Preference number: 4 (lower is better)
Translates to: SFMAAEGVEVLLTHRVSVDDDSL*QSGKRG
Trigger: ACCACGTTTCCCTGACTGTCATAGAGAATCATCATC...CACTGACACCCTGTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR TCA 90 bp TCTACCCTGCCAGGAGAGGCGTGTTTGGGTAACAGGCAGATGGAGTTTGGAACATACCAAGAGACTCCTTaGGAGACCAGGCAAAGCAAG +
Preference number: 4 (lower is better)
Translates to: STLPGEACLGNRQMEFGTYQETP*ETRQSK
Trigger: CTTGCTTTGCCTGGTCTCTCAAGGAGTCTCTTGGTA...TGTTCCAAACTCCATCTGCCTGTTACCCAAACACGCCTCTCCTGGCAGGGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp ATGGGCAGCTCATCTCTGTCCCACTTGGCATCAGCTGGCGTCATGCAAAGTCATAGGGTCCACAGGAAGTaGAGAATCTGTTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: MGSSSLSHLASAGVMQSHRVHRK*RICFPA
Trigger: TGCTGGGAAACAGATTCTTCACTTCCTGTGGACCCT...ATGACTTTGCATGACGCCAGCTGATGCCAAGTGGGACAGAGATGAGCTGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp CTTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACACACAGGGTGTCAGTGATTGGCATTCTCAGAGATaGGCAGTCCATCAGCTTGTT +
Preference number: 4 (lower is better)
Translates to: LHGSGGSGGSAYTQGVSDWHSQR*AVHQLV
Trigger: AACAAGCTGATGGACTGCGCATCTCTGAGAATGCCA...ATCACTGACACCCTGTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR GCA 90 bp AGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTTGCCAAGAAGTAACGATAGCGAGCTGACACAAACCTaGCTGGGTTTAAGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SWSSSMSHGSSLPRSNDSELTQT*LGLRGE
Trigger: CTCTCCCCTTAAACCCAGGCAGGTTTGTGTCAGCTC...GCTATCGTTACTTCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GGTGGGCTGCCGCCTCTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTTGGTGTCAGTGATGCTTTaGATAATTTCAAAACCGGTC +
Preference number: 4 (lower is better)
Translates to: GGLPPLVGILRDAQSISLVSVML*IISKPV
Trigger: GACCGGTTTTGAAATTATCCAAAGCATCACTGACAC...CAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAGCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CCA 90 bp TGGTGTCCCAACAGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTTGCCAAGATTTGGAACACATGAATaGCTCATCACACGCCAACCC +
Preference number: 4 (lower is better)
Translates to: WCPNSWSSSMSHGSSLPRFGTHE*LITRQP
Trigger: GGGTTGGCGTGTGATGAGCCATTCATGTGTTCCAAA...TCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCTGTTGGGACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CCA 90 bp CCTGGGGTACCAAGAGACTCCTTGAGAGACCAGGCAAAGCAAGTGATTGGGACATGGCAGAGCTTGGACTaGATGCATGTTTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PGVPRDSLRDQAKQVIGTWQSLD*MHVFQL
Trigger: GAGCTGGAAAACATGCATCCAGTCCAAGCTCTGCCA...TGTCCCAATCACTTGCTTTGCCTGGTCTCTCAAGGAGTCTCTTGGTACCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp CCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCCAACAACTGTGTACAGTAAATaGCTTATCCAGCTGGTGAGT +
Preference number: 4 (lower is better)
Translates to: PKSEHRPLRAPRLLGVPTTVYSK*LIQLVS
Trigger: ACTCACCAGCTGGATAAGCCATTTACTGTACACAGT...TGTTGGGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp ATGGGCAGCTCATCTCTGTCCCACTTGGCATCAGCTGGCGTCATGCAAAGTCATGCCTTGGAAGTTGCATaGCATCACCTCCACCATACT +
Preference number: 4 (lower is better)
Translates to: MGSSSLSHLASAGVMQSHALEVA*HHLHHT
Trigger: AGTATGGTGGAGGTGATGCCATGCAACTTCCAAGGC...ATGACTTTGCATGACGCCAGCTGATGCCAAGTGGGACAGAGATGAGCTGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp CCTCAGAGTATGGAGCTCAGAGAGGGCAGGCATGAAGTTTCCTTGGCTGGTGCATCACAACATGGTGTCTaGATTCCCAGGATGAGCATC +
Preference number: 4 (lower is better)
Translates to: PQSMELREGRHEVSLAGASQHGV*IPRMSI
Trigger: GATGCTCATCCTGGGAATCCAGACACCATGTTGTGA...TGCACCAGCCAAGGAAACTTCATGCCTGCCCTCTCTGAGCTCCATACTCTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp TGGTGTCCCAACAGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTTGCCAAGACATCCTCATATCTCTTaGCTAGCACCAAGTCCACAA +
Preference number: 4 (lower is better)
Translates to: WCPNSWSSSMSHGSSLPRHPHIS*LAPSPQ
Trigger: TTGTGGACTTGGTGCTAGTCAAGAGATATGAGGATG...TCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCTGTTGGGACACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR TCA 90 bp GGGAGTGGAGGTTCTGCTTACACACAGGGTGTCAGTGATGCTTTGGATAATTTCGCTTGTTCCAAAGAGTaGACACAGGCCTCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: GSGGSAYTQGVSDALDNFACSKE*TQASAC
Trigger: GCACGCAGAGGCCTGTGTTCACTCTTTGGAACAAGC...GAAATTATCCAAAGCATCACTGACACCCTGTGTGTAAGCAGAACCTCCACTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR TCA 90 bp GAACACATGAATGGCTCATCACACGCCAACCCTGAGTGGGGCAGGAGGCAGGAAGAACTCATGAGAAGTTaGTATAGAACAGTGCTTGCC +
Preference number: 4 (lower is better)
Translates to: EHMNGSSHANPEWGRRQEELMRS*YRTVLA
Trigger: GGCAAGCACTGTTCTATATCAACTTCTCATGAGTTC...TTCCTGCCTCCTGCCCCACTCAGGGTTGGCGTGTGATGAGCCATTCATGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp TGGTGTCCCAACAGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTTGCCAAGAAAACTGAAACTCCATTaGCTTCCCGGCAAATCTTCC +
Preference number: 4 (lower is better)
Translates to: WCPNSWSSSMSHGSSLPRKLKLH*LPGKSS
Trigger: GGAAGATTTGCCGGGAAGGCAATGGAGTTTCAGTTT...TCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCTGTTGGGACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp CGCAAGAGCCATGTAGAAGCTGCATCTTGTTTATACCTTTGCCTTGGAAGTTGCGGGGGACATAACGGATaGTCCACATGGGTGGCGTTG +
Preference number: 4 (lower is better)
Translates to: RKSHVEAASCLYLCLGSCGGHNG*STWVAL
Trigger: CAACGCCACCCATGTGGAGCATCCGTTATGTCCCCC...GCAACTTCCAAGGCAAAGGTATAAACAAGATGCAGCTTCTACATGGCTCTTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp CCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCCAACAATGGAATTGCTTCACTaGTTTCTGAAGGTTGGCATA +
Preference number: 4 (lower is better)
Translates to: PKSEHRPLRAPRLLGVPTMELLH*FLKVGI
Trigger: TATGCCAACCTTCAGAAAGCAGTGAAGCAATTCCAT...TGTTGGGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR GCA 90 bp CCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACCCTGCCAGGAGAGGCGTACTATCAGCCCAAGATaGTTTAAGTGCACAACATTA +
Preference number: 4 (lower is better)
Translates to: PSLCQMVRGLGLPCQERRTISPR*FKCTTL
Trigger: TAATGTTGTGCACTTAAAGCATCTTGGGCTGATAGT...ACGCCTCTCCTGGCAGGGTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp CGCAAGAGCCATGTAGAAGCTGCATCTTGTTTATACCTTTGCCTTGGAAGTTGCAAGCGTGGACAGGTGTaGCGACAGAAGGAACCAGCG +
Preference number: 4 (lower is better)
Translates to: RKSHVEAASCLYLCLGSCKRGQV*RQKEPA
Trigger: CGCTGGTTCCTTCTGTCGGCACACCTGTCCACGCTT...GCAACTTCCAAGGCAAAGGTATAAACAAGATGCAGCTTCTACATGGCTCTTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GGTCTTGGTGGGTTCCCCTGGAAGAGGTTCACAGAAGCAACCACAAGGATGGTTCTGCTTTCTGAAGGTTaGCATAAAACCGGGTCATGC +
Preference number: 4 (lower is better)
Translates to: GLGGFPWKRFTEATTRMVLLSEG*HKTGSC
Trigger: GCATGACCCGGTTTTATGCCAACCTTCAGAAAGCAG...AACCATCCTTGTGGTTGCTTCTGTGAACCTCTTCCAGGGGAACCCACCAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CCA 90 bp GGTTCACAGAAGCAACCACAAGGATGGTTAAATCCTCTCACAAAACCTGGCTTCGTGGGCTGCCGCCTCTaGTTGGCATTCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: GSQKQPQGWLNPLTKPGFVGCRL*LAFSEM
Trigger: CATCTCTGAGAATGCCAACCAGAGGCGGCAGCCCAC...GAAGCCAGGTTTTGTGAGAGGATTTAACCATCCTTGTGGTTGCTTCTGTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CCA 90 bp AAGGGTGGTGGAGCCAGTAAACAGAGGAGTACAGGTGAAGCACCAAGCTCAAAGAGATGCATTCTTGGTTaGCTGGCCTTCCACTTGGCT +
Preference number: 4 (lower is better)
Translates to: KGGGASKQRSTGEAPSSKRCILG*LAFHLA
Trigger: AGCCAAGTGGAAGGCCAGCCAACCAAGAATGCATCT...CTTTGAGCTTGGTGCTTCACCTGTACTCCTCTGTTTACTGGCTCCACCACCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GCAATGTGGGCAGAGATTGGAATGGGCAGCTCATCTCTGTCCCACTTGGCATCAGGCCAAAGGGATATTTaGTTTGGCCATCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: AMWAEIGMGSSSLSHLASGQRDI*FGHLWM
Trigger: CATCCAGAGATGGCCAAACCAAATATCCCTTTGGCC...TGATGCCAAGTGGGACAGAGATGAGCTGCCCATTCCAATCTCTGCCCACATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp ATGATTCTCTATGACAGTCAGGGAAACGTGGTCTCTGAGAGTGATGGGCACATACCTCTCCTTGTGGCCTaGGCCTCCTCACAACATGGT +
Preference number: 4 (lower is better)
Translates to: MILYDSQGNVVSESDGHIPLLVA*ASSQHG
Trigger: ACCATGTTGTGAGGAGGCCCAGGCCACAAGGAGAGG...TATGTGCCCATCACTCTCAGAGACCACGTTTCCCTGACTGTCATAGAGAATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp TCTACCCTGCCAGGAGAGGCGTGTTTGGGTAACAGGCAGATGGAGTTTGGAACACATGAATCTGCAATGTaGGCAGAGATTGGAATGGGC +
Preference number: 4 (lower is better)
Translates to: STLPGEACLGNRQMEFGTHESAM*AEIGMG
Trigger: GCCCATTCCAATCTCTGCCCACATTGCAGATTCATG...TGTTCCAAACTCCATCTGCCTGTTACCCAAACACGCCTCTCCTGGCAGGGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GGTGGGCTGCCGCCTCTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTTGTATGACATTCATGCCTaGCTTCGCAAAATGTTTCAA +
Preference number: 4 (lower is better)
Translates to: GGLPPLVGILRDAQSISLYDIHA*LRKMFQ
Trigger: TTGAAACATTTTGCGAAGCCAGGCATGAATGTCATA...CAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAGCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp CTGGGAGAAATGAGCTTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACACACGAAAACAATCCCCATTaGAATCCCTCTCAATCGGGT +
Preference number: 4 (lower is better)
Translates to: LGEMSFMAAEGVEVLLTHENNPH*NPSQSG
Trigger: ACCCGATTGAGAGGGATTCCAATGGGGATTGTTTTC...GTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAAGCTCATTTCTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560156.1
CDS-3UTR GCA 90 bp TTGTTCCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCATGGAATTGCTTCACTaGTTTCTGAAGGTTGGCATA +
Preference number: 4 (lower is better)
Translates to: LFQRVNTGLCVLPGSLVSMELLH*FLKVGI
Trigger: TATGCCAACCTTCAGAAAGCAGTGAAGCAATTCCAT...GGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGGAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR GCA 90 bp GAACACATGAATGGCTCATCACACGCCAACCCTGAGTGGGGCAGGAGGCAGGAAACTGTGAAAACATTTTaGGCGCACAATAGTAACCTG +
Preference number: 4 (lower is better)
Translates to: EHMNGSSHANPEWGRRQETVKTF*AHNSNL
Trigger: CAGGTTACTATTGTGCGCGCAAAATGTTTTCACAGT...TTCCTGCCTCCTGCCCCACTCAGGGTTGGCGTGTGATGAGCCATTCATGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GTCCACAAAATCTCTGGGAGAAATGAGCTTCATGGCAGCGGAGGGAGTGGAGGTTCAGAAAAATATATTTaGGGGGCTGCAGCACAGGAC +
Preference number: 4 (lower is better)
Translates to: VHKISGRNELHGSGGSGGSEKYI*GAAAQD
Trigger: GTCCTGTGCTGCAGCCCCCCAAATATATTTTTCTGA...ACCTCCACTCCCTCCGCTGCCATGAAGCTCATTTCTCCCAGAGATTTTGTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CCA 90 bp TTGTTCCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCTGGCCTATTCCATTCTaGATTTTGTCAAGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: LFQRVNTGLCVLPGSLVSWPIPF*ILSSSR
Trigger: TCTACTGCTTGACAAAATCCAGAATGGAATAGGCCA...GGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGGAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp CTGCCGCCTCTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTTGTTCCAATTTATACCTTTGCCTTaGAAGTTGCATGGCATCACC +
Preference number: 4 (lower is better)
Translates to: LPPLVGILRDAQSISLFQFIPLP*KLHGIT
Trigger: GGTGATGCCATGCAACTTCCAAGGCAAAGGTATAAA...TTGGAACAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp AAAATCTCTGGGAGAAATGAGCTTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTCATCCTCATATCTCTTaGCTAGCACCAAGTCCACAA +
Preference number: 4 (lower is better)
Translates to: KISGRNELHGSGGSGGSAHPHIS*LAPSPQ
Trigger: TTGTGGACTTGGTGCTAGTCAAGAGATATGAGGATG...AGCAGAACCTCCACTCCCTCCGCTGCCATGAAGCTCATTTCTCCCAGAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325346.6
ENST00000560156.1
CDS-3UTR TCA 90 bp GTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGGATTTTGTCAAGCAGTACAGAGAGGGCAGGCATaGAGTTTCCTTGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: VLLVNLFGLFHSGFCQAVQRGQA*SFLGWC
Trigger: GCACCAGCCAAGGAAACTTCATGCCTGCCCTCTCTG...TACTGCTTGACAAAATCCAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp CGCAAGAGCCATGTAGAAGCTGCATCTTGTTTATACCTTTGCCTTGGAAGTTGCCTGACCAGTTTAACCTaGTGCAGTCACGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RKSHVEAASCLYLCLGSCLTSLT*CSHVEE
Trigger: CTCCTCCACGTGACTGCATCAGGTTAAACTGGTCAG...GCAACTTCCAAGGCAAAGGTATAAACAAGATGCAGCTTCTACATGGCTCTTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp AGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTTGCCAAGAAGTAACGATAGCTCCATTTGCGTTCCATaGTGCTGGGATTTACACTTG +
Preference number: 4 (lower is better)
Translates to: SWSSSMSHGSSLPRSNDSSICVP*CWDLHL
Trigger: CAAGTGTAAATCCCAGCATCATGGAACGCAAATGGA...GCTATCGTTACTTCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp GCAATGTGGGCAGAGATTGGAATGGGCAGCTCATCTCTGTCCCACTTGGCATCATTGAGTTTTCTTCTGTaGTTCGGTGGAGACTATCAG +
Preference number: 4 (lower is better)
Translates to: AMWAEIGMGSSSLSHLASLSFLL*FGGDYQ
Trigger: CTGATAGTCTCCACCGAATCACAGAAGAAAACTCAA...TGATGCCAAGTGGGACAGAGATGAGCTGCCCATTCCAATCTCTGCCCACATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp GAACACATGAATGGCTCATCACACGCCAACCCTGAGTGGGGCAGGAGGCAGGAATGCTGGGGTCATTTATaGAAAATACAGTTTGTCACA +
Preference number: 4 (lower is better)
Translates to: EHMNGSSHANPEWGRRQECWGHL*KIQFVT
Trigger: TGTGACAAACTGTATTTTTCATAAATGACCCCAGCA...TTCCTGCCTCCTGCCCCACTCAGGGTTGGCGTGTGATGAGCCATTCATGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp AAGGGTGGTGGAGCCAGTAAACAGAGGAGTACAGGTGAAGCACCAAGCTCAAAGGTCACGGGAGTTCTTTaGCAAGAAGTAACGATAGCA +
Preference number: 4 (lower is better)
Translates to: KGGGASKQRSTGEAPSSKVTGVL*QEVTIA
Trigger: TGCTATCGTTACTTCTTGGCAAAGAACTCCCGTGAC...CTTTGAGCTTGGTGCTTCACCTGTACTCCTCTGTTTACTGGCTCCACCACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp ATGATTCTCTATGACAGTCAGGGAAACGTGGTCTCTGAGAGTGATGGGCACATAATAGGGAAAGAAAGTTaGACGGCTGCTGAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: MILYDSQGNVVSESDGHIIGKES*TAAEAP
Trigger: AGGGGCCTCAGCAGCCGTGCAACTTTCTTTCCCTAT...TATGTGCCCATCACTCTCAGAGACCACGTTTCCCTGACTGTCATAGAGAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp TCCACTCCCAGGCAGCCCTACTTCTTTGCTTTGCCCAGCATTTTACTGATTCATGTTGATATAGAACAGTaGTTGCCACAGAGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: STPRQPYFFALPSILLIHVDIEQ*LPQSGD
Trigger: GTCCCCGCTCTGTGGCAAGCACTGTTCTATATCAAC...ATGAATCAGTAAAATGCTGGGCAAAGCAAAGAAGTAGGGCTGCCTGGGAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp TGGTGTCCCAACAGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTTGCCAAGACCAAGATGCTTTAAGTaGACAACATTACAGGGAATG +
Preference number: 4 (lower is better)
Translates to: WCPNSWSSSMSHGSSLPRPRCFK*TTLQGM
Trigger: CATTCCCTGTAATGTTGTGCACTTAAAGCATCTTGG...TCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCTGTTGGGACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp TCTACCCTGCCAGGAGAGGCGTGTTTGGGTAACAGGCAGATGGAGTTTGGAACACGGTGTATGGTTCTGTaGCAATGTATTGATAAGAGG +
Preference number: 4 (lower is better)
Translates to: STLPGEACLGNRQMEFGTRCMVL*QCIDKR
Trigger: CCTCTTATCAATACATTGGCACAGAACCATACACCG...TGTTCCAAACTCCATCTGCCTGTTACCCAAACACGCCTCTCCTGGCAGGGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GGCTTAGAGCAGTTTCTGTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGTCGGTACAGGTTCCCTaGAAACTCCACAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: GLEQFLSCWLTCLAYSILSVQVP*KLHRWP
Trigger: AGGCCATCTGTGGAGTTTCCAGGGAACCTGTACCGA...CAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGACAGAAACTGCTCTAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp ATGAGCTTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACACACAGGGTGTCAGTGTCAGTGATGCTTTaGATAATTTCAAAACCGGTC +
Preference number: 4 (lower is better)
Translates to: MSFMAAEGVEVLLTHRVSVSVML*IISKPV
Trigger: GACCGGTTTTGAAATTATCCAAAGCATCACTGACAC...TGACACCCTGTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAAGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325346.6
ENST00000560156.1
CDS-3UTR CCA 90 bp GCAATGTGGGCAGAGATTGGAATGGGCAGCTCATCTCTGTCCCACTTGGCATCATGGGTAACAGGCAGATaGAGTTTGGAACACATGAAT +
Preference number: 4 (lower is better)
Translates to: AMWAEIGMGSSSLSHLASWVTGR*SLEHMN
Trigger: ATTCATGTGTTCCAAACTCCATCTGCCTGTTACCCA...TGATGCCAAGTGGGACAGAGATGAGCTGCCCATTCCAATCTCTGCCCACATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp TCTCTGGGAGAAATGAGCTTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACATGGGTAACAGGCAGATaGAGTTTGGAACACATGAAT +
Preference number: 4 (lower is better)
Translates to: SLGEMSFMAAEGVEVLLTWVTGR*SLEHMN
Trigger: ATTCATGTGTTCCAAACTCCATCTGCCTGTTACCCA...TGTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAAGCTCATTTCTCCCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
3UTR CAA 72 bp GTGGCGTTGGAACTGATGGTCCCATCCTCATATCTCTaGACTAGCACCAAGTCCACAAAATCTCTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: VALELMVPSSYL*TSTKSTKSLGE
Trigger: TTCTCCCAGAGATTTTGTGGACTTGGTGCTAGTCAAGAGATATGAGGATGGGACCATCAGTTCCAACGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR TCA 90 bp TGGTGTCCCAACAGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTTGCCAAGATGCCCAGCATTTTACTaGTTCATACATTATCTCACT +
Preference number: 4 (lower is better)
Translates to: WCPNSWSSSMSHGSSLPRCPAFY*FIHYLT
Trigger: AGTGAGATAATGTATGAATCAGTAAAATGCTGGGCA...TCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCTGTTGGGACACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp CGCAAGAGCCATGTAGAAGCTGCATCTTGTTTATACCTTTGCCTTGGAAGTTGCGCTGGGATTTACACTTaGGGCTTAGCTTTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RKSHVEAASCLYLCLGSCAGIYT*GLALLC
Trigger: GCAGAGCAAAGCTAAGCCTCAAGTGTAAATCCCAGC...GCAACTTCCAAGGCAAAGGTATAAACAAGATGCAGCTTCTACATGGCTCTTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp ATGATTCTCTATGACAGTCAGGGAAACGTGGTCTCTGAGAGTGATGGGCACATACACATAAAGCCTTGGTaGCAGAGTGCATCGCATGGT +
Preference number: 4 (lower is better)
Translates to: MILYDSQGNVVSESDGHIHIKPW*QSASHG
Trigger: ACCATGCGATGCACTCTGGCACCAAGGCTTTATGTG...TATGTGCCCATCACTCTCAGAGACCACGTTTCCCTGACTGTCATAGAGAATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR GCA 90 bp CGCAAGAGCCATGTAGAAGCTGCATCTTGTTTATACCTTTGCCTTGGAAGTTGCCAACATTACAGGGAATaGCTGAGTGCCTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: RKSHVEAASCLYLCLGSCQHYRE*LSAWPK
Trigger: CTTTGGCCAGGCACTCAGGCATTCCCTGTAATGTTG...GCAACTTCCAAGGCAAAGGTATAAACAAGATGCAGCTTCTACATGGCTCTTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp ATTATCTCACTTGTGCCAACACTCAAGAAGCAGGCTACACTGACACTGGTATTCACATGCCAAGCACTGTaGTCAGGGCTAAACGGGCAT +
Preference number: 4 (lower is better)
Translates to: IISLVPTLKKQATLTLVFTCQAL*SGLNGH
Trigger: ATGCCCGTTTAGCCCTGAGCACAGTGCTTGGCATGT...GAATACCAGTGTCAGTGTAGCCTGCTTCTTGAGTGTTGGCACAAGTGAGATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp GCAATGTGGGCAGAGATTGGAATGGGCAGCTCATCTCTGTCCCACTTGGCATCATCTTGTTTATACCTTTaGCTTGGAAGTTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: AMWAEIGMGSSSLSHLASSCLYL*LGSCMA
Trigger: TGCCATGCAACTTCCAAGGCAAAGGTATAAACAAGA...TGATGCCAAGTGGGACAGAGATGAGCTGCCCATTCCAATCTCTGCCCACATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp TCGATGAGTCACGGGAGTTCTTTGCCAAGAAGTAACGATAGCATTACTCATGGAAACGGATGCTCCACATaGGTGGCGTTGGAACTGATG +
Preference number: 4 (lower is better)
Translates to: SMSHGSSLPRSNDSITHGNGCST*VALELM
Trigger: CATCAGTTCCAACGCCACCCATGTGGAGCATCCGTT...TCCATGAGTAATGCTATCGTTACTTCTTGGCAAAGAACTCCCGTGACTCATCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CCA 90 bp GGCTTAGAGCAGTTTCTGTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGTGTGAAGTAAGGATGTaGGGGAAGACCTGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GLEQFLSCWLTCLAYSILCEVRM*GKTWQG
Trigger: TCCTTGCCAGGTCTTCCCCCACATCCTTACTTCACA...CAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGACAGAAACTGCTCTAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp TCCACTCCCAGGCAGCCCTACTTCTTTGCTTTGCCCAGCATTTTACTGATTCATGAATGCCTGAGTGCCTaGCCAAAGGGATATTTGGTT +
Preference number: 4 (lower is better)
Translates to: STPRQPYFFALPSILLIHECLSA*PKGYLV
Trigger: AACCAAATATCCCTTTGGCCAGGCACTCAGGCATTC...ATGAATCAGTAAAATGCTGGGCAAAGCAAAGAAGTAGGGCTGCCTGGGAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp ATGATTCTCTATGACAGTCAGGGAAACGTGGTCTCTGAGAGTGATGGGCACATATGGCATTCTCAGAGATaGGCAGTCCATCAGCTTGTT +
Preference number: 4 (lower is better)
Translates to: MILYDSQGNVVSESDGHIWHSQR*AVHQLV
Trigger: AACAAGCTGATGGACTGCGCATCTCTGAGAATGCCA...TATGTGCCCATCACTCTCAGAGACCACGTTTCCCTGACTGTCATAGAGAATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR GCA 90 bp GGCTTAGAGCAGTTTCTGTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGAGAGCTTGGACTGGATaGATGTTTTCCAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GLEQFLSCWLTCLAYSILRAWTG*MFSSSS
Trigger: TGAGGAGCTGGAAAACATGCATCCAGTCCAAGCTCT...CAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGACAGAAACTGCTCTAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp GTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGGATTTTGTCAAGCAGTACAAACTCACCATCTGTaGACGCAGTGGCCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: VLLVNLFGLFHSGFCQAVQTHHL*TQWPSL
Trigger: TAGGGAAGGCCACTGCGTGCACAGATGGTGAGTTTG...TACTGCTTGACAAAATCCAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp GTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGGATTTTGTCAAGCAGTACGTCATGCAAAGTCATaGAAAGGCTGGGACCACGTG +
Preference number: 4 (lower is better)
Translates to: VLLVNLFGLFHSGFCQAVRHAKS*KGWDHV
Trigger: CACGTGGTCCCAGCCTTTGCATGACTTTGCATGACG...TACTGCTTGACAAAATCCAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GGCTTAGAGCAGTTTCTGTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGTTTGGAACACATGAATaGCTCATCACACGCCAACCC +
Preference number: 4 (lower is better)
Translates to: GLEQFLSCWLTCLAYSILFGTHE*LITRQP
Trigger: GGGTTGGCGTGTGATGAGCCATTCATGTGTTCCAAA...CAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGACAGAAACTGCTCTAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp CGCAAGAGCCATGTAGAAGCTGCATCTTGTTTATACCTTTGCCTTGGAAGTTGCGGCAAAGCAAGTGATTaGGACAGAGGTTATCTGTCC +
Preference number: 4 (lower is better)
Translates to: RKSHVEAASCLYLCLGSCGKASD*DRGYLS
Trigger: GGACAGATAACCTCTGTCCCAATCACTTGCTTTGCC...GCAACTTCCAAGGCAAAGGTATAAACAAGATGCAGCTTCTACATGGCTCTTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp CGCAAGAGCCATGTAGAAGCTGCATCTTGTTTATACCTTTGCCTTGGAAGTTGCATTCACTCATACATCTaGCCGTTGATGTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RKSHVEAASCLYLCLGSCIHSYI*PLMLAG
Trigger: CCCAGCCAACATCAACGGCCAGATGTATGAGTGAAT...GCAACTTCCAAGGCAAAGGTATAAACAAGATGCAGCTTCTACATGGCTCTTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp CGCAAGAGCCATGTAGAAGCTGCATCTTGTTTATACCTTTGCCTTGGAAGTTGCAAGTCATGCAAAGGCTaGGACCACGTGAGATCATTC +
Preference number: 4 (lower is better)
Translates to: RKSHVEAASCLYLCLGSCKSCKG*DHVRSF
Trigger: GAATGATCTCACGTGGTCCCAGCCTTTGCATGACTT...GCAACTTCCAAGGCAAAGGTATAAACAAGATGCAGCTTCTACATGGCTCTTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp GGCTTAGAGCAGTTTCTGTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGCATGTTAATGTAATCTaGTGGCTTCTCCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: GLEQFLSCWLTCLAYSILHVNVI*WLLQGP
Trigger: TGGACCCTGGAGAAGCCATCAGATTACATTAACATG...CAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGACAGAAACTGCTCTAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR GCA 90 bp ATTATCTCACTTGTGCCAACACTCAAGAAGCAGGCTACACTGACACTGGTATTCGAGCAGTTTCTGTCCTaGTGGTTAACTTGTTTGGCC +
Preference number: 4 (lower is better)
Translates to: IISLVPTLKKQATLTLVFEQFLS*WLTCLA
Trigger: GGCCAAACAAGTTAACCAGCAGGACAGAAACTGCTC...GAATACCAGTGTCAGTGTAGCCTGCTTCTTGAGTGTTGGCACAAGTGAGATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GGCTTAGAGCAGTTTCTGTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGTCAGAAAAATATATTTaGGGGGCTGCAGCACAGGAC +
Preference number: 4 (lower is better)
Translates to: GLEQFLSCWLTCLAYSILSEKYI*GAAAQD
Trigger: GTCCTGTGCTGCAGCCCCCCAAATATATTTTTCTGA...CAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGACAGAAACTGCTCTAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp CGCAAGAGCCATGTAGAAGCTGCATCTTGTTTATACCTTTGCCTTGGAAGTTGCCAGATTCACACTGTCTaGTTTCACCGAGGACATGAA +
Preference number: 4 (lower is better)
Translates to: RKSHVEAASCLYLCLGSCQIHTV*FHRGHE
Trigger: TTCATGTCCTCGGTGAAACCAGACAGTGTGAATCTG...GCAACTTCCAAGGCAAAGGTATAAACAAGATGCAGCTTCTACATGGCTCTTGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CAA 72 bp AAAGCAGATATATTAAGTGACTGTTCAAGAGCACACTaGGCCCAAGTGGCAGAGCTTGGACTGGATGCATGT +
Preference number: 4 (lower is better)
Translates to: KADILSDCSRAH*AQVAELGLDAC
Trigger: ACATGCATCCAGTCCAAGCTCTGCCACTTGGGCCAAGTGTGCTCTTGAACAGTCACTTAATATATCTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CAA 72 bp AGCAGCTTCTACGGTGTATGGTTCTGTGCCAATGTATaGATAAGAGGGCACACACTGTGTACAGTAAATGGC +
Preference number: 4 (lower is better)
Translates to: SSFYGVWFCANV*IRGHTLCTVNG
Trigger: GCCATTTACTGTACACAGTGTGTGCCCTCTTATCAATACATTGGCACAGAACCATACACCGTAGAAGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CAA 72 bp CAAGAGCCATGTAGAAGCTGCATCTTGTTTATACCTTaGCCTTGGAAGTTGCATGGCATCACCTCCACCATA +
Preference number: 4 (lower is better)
Translates to: QEPCRSCILFIP*PWKLHGITSTI
Trigger: TATGGTGGAGGTGATGCCATGCAACTTCCAAGGCAAAGGTATAAACAAGATGCAGCTTCTACATGGCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CAA 72 bp AACAGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTaGCCAAGAAGTAACGATAGCATTACTCATGGAATT +
Preference number: 4 (lower is better)
Translates to: NSWSSSMSHGSS*PRSNDSITHGI
Trigger: AATTCCATGAGTAATGCTATCGTTACTTCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR TCA 90 bp ATTCCATTCTGGATTTTGTCAAGCAGTAGACAAGCAATTAGACAAGAACTTGGAGCTTGTTCCAAAGAGTaGACACAGGCCTCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: IPFWILSSSRQAIRQELGACSKE*TQASAC
Trigger: GCACGCAGAGGCCTGTGTTCACTCTTTGGAACAAGC...TCCAAGTTCTTGTCTAATTGCTTGTCTACTGCTTGACAAAATCCAGAATGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp ATGATTCTCTATGACAGTCAGGGAAACGTGGTCTCTGAGAGTGATGGGCACATAGCACCTAGAATTGGCTaGACTCATGAGAAGTTGATA +
Preference number: 4 (lower is better)
Translates to: MILYDSQGNVVSESDGHIAPRIG*THEKLI
Trigger: TATCAACTTCTCATGAGTTCAGCCAATTCTAGGTGC...TATGTGCCCATCACTCTCAGAGACCACGTTTCCCTGACTGTCATAGAGAATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp GTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGGATTTTGTCAAGCAGTACAACTTCTTCAGAGCTaGCACAGGATGAAGGCAATG +
Preference number: 4 (lower is better)
Translates to: VLLVNLFGLFHSGFCQAVQLLQS*HRMKAM
Trigger: CATTGCCTTCATCCTGTGTCAGCTCTGAAGAAGTTG...TACTGCTTGACAAAATCCAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
3UTR CAA 72 bp AGAAGCTGCATCTTGTTTATACCTTTGCCTTGGAAGTaGCATGGCATCACCTCCACCATACTCCATCAGTTA +
Preference number: 4 (lower is better)
Translates to: RSCILFIPLPWK*HGITSTILHQL
Trigger: TAACTGATGGAGTATGGTGGAGGTGATGCCATGCAACTTCCAAGGCAAAGGTATAAACAAGATGCAGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp TCCACTCCCAGGCAGCCCTACTTCTTTGCTTTGCCCAGCATTTTACTGATTCATAATTGGCTGAACTCATaGGAAGTTGATATAGAACAG +
Preference number: 4 (lower is better)
Translates to: STPRQPYFFALPSILLIHNWLNS*EVDIEQ
Trigger: CTGTTCTATATCAACTTCTCATGAGTTCAGCCAATT...ATGAATCAGTAAAATGCTGGGCAAAGCAAAGAAGTAGGGCTGCCTGGGAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp GGCTTAGAGCAGTTTCTGTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGGTGTCAGTGATGCTTTaGATAATTTCAAAACCGGTC +
Preference number: 4 (lower is better)
Translates to: GLEQFLSCWLTCLAYSILVSVML*IISKPV
Trigger: GACCGGTTTTGAAATTATCCAAAGCATCACTGACAC...CAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGACAGAAACTGCTCTAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp ATTCCATTCTGGATTTTGTCAAGCAGTAGACAAGCAATTAGACAAGAACTTGGACTTGGTGGGTTCCCCTaGAAGAGGTTCACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: IPFWILSSSRQAIRQELGLGGFP*KRFTEA
Trigger: TGCTTCTGTGAACCTCTTCCAGGGGAACCCACCAAG...TCCAAGTTCTTGTCTAATTGCTTGTCTACTGCTTGACAAAATCCAGAATGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp ATGATTCTCTATGACAGTCAGGGAAACGTGGTCTCTGAGAGTGATGGGCACATAGATTTTAGTCACACGTaGTCTTTCTTACAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: MILYDSQGNVVSESDGHIDFSHT*SFLQGR
Trigger: CCTTCCTTGTAAGAAAGACCACGTGTGACTAAAATC...TATGTGCCCATCACTCTCAGAGACCACGTTTCCCTGACTGTCATAGAGAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp GTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGGATTTTGTCAAGCAGTAGTTCAGAATCACTTCTaGGAACTCATCCCTAATGCT +
Preference number: 4 (lower is better)
Translates to: VLLVNLFGLFHSGFCQAVVQNHF*ELIPNA
Trigger: AGCATTAGGGATGAGTTCTCAGAAGTGATTCTGAAC...TACTGCTTGACAAAATCCAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp ATGATTCTCTATGACAGTCAGGGAAACGTGGTCTCTGAGAGTGATGGGCACATAAGCAGATATATTAAGTaGCTGTTCAAGAGCACACTT +
Preference number: 4 (lower is better)
Translates to: MILYDSQGNVVSESDGHISRYIK*LFKSTL
Trigger: AAGTGTGCTCTTGAACAGTCACTTAATATATCTGCT...TATGTGCCCATCACTCTCAGAGACCACGTTTCCCTGACTGTCATAGAGAATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp GGCTTAGAGCAGTTTCTGTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGGAACCAGCGTGTATATaGGGGTATCAAATAAAATTG +
Preference number: 4 (lower is better)
Translates to: GLEQFLSCWLTCLAYSILEPACI*GYQIKL
Trigger: CAATTTTATTTGATACCCTCATATACACGCTGGTTC...CAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGACAGAAACTGCTCTAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp ATTCCATTCTGGATTTTGTCAAGCAGTAGACAAGCAATTAGACAAGAACTTGGAGGTTTTCATCAAGACTaGAAGGTGGGGACAGGGATG +
Preference number: 4 (lower is better)
Translates to: IPFWILSSSRQAIRQELGGFHQD*KVGTGM
Trigger: CATCCCTGTCCCCACCTTCCAGTCTTGATGAAAACC...TCCAAGTTCTTGTCTAATTGCTTGTCTACTGCTTGACAAAATCCAGAATGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR TCA 90 bp ATTCCATTCTGGATTTTGTCAAGCAGTAGACAAGCAATTAGACAAGAACTTGGATGGAGGAGCAAAGGCTaGGAACACTGTGAAAACATT +
Preference number: 4 (lower is better)
Translates to: IPFWILSSSRQAIRQELGWRSKG*EHCENI
Trigger: AATGTTTTCACAGTGTTCTCAGCCTTTGCTCCTCCA...TCCAAGTTCTTGTCTAATTGCTTGTCTACTGCTTGACAAAATCCAGAATGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CCA 90 bp ATTCCATTCTGGATTTTGTCAAGCAGTAGACAAGCAATTAGACAAGAACTTGGATGTTTTTGGTTGGATTaGAGAAGTAATCCTAGGGAA +
Preference number: 4 (lower is better)
Translates to: IPFWILSSSRQAIRQELGCFWLD*RSNPRE
Trigger: TTCCCTAGGATTACTTCTCCAATCCAACCAAAAACA...TCCAAGTTCTTGTCTAATTGCTTGTCTACTGCTTGACAAAATCCAGAATGGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS GCA 90 bp TGGGCTGCCAGCGCCGGGTCCATTGCGTCGGGAGCTGCGCTTAGCTaGGGGGTCGCGGGTGTTATGAGCGGCGGCGCTGGATCCCGGGTG +
Preference number: 5 (lower is better)
Translates to: WAASAGSIASGAALS*GVAGVMSGGAGSRV
Trigger: CACCCGGGATCCAGCGCCGCCGCTCATAACACCCGCGACCCCGCAGCTAAGCGCAGCTCCCGACGCAATGGACCCGGCGCTGGCAGCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS CCA 90 bp TCCCGCCGGTACTGGAGCATCTTCTCGGCCACAGCCTCGCTCATCTaGGCTGCCAGCGCCGGGTCCATTGCGTCGGGAGCTGCGCTTAGC +
Preference number: 5 (lower is better)
Translates to: SRRYWSIFSATASLI*AASAGSIASGAALS
Trigger: GCTAAGCGCAGCTCCCGACGCAATGGACCCGGCGCTGGCAGCCCAGATGAGCGAGGCTGTGGCCGAGAAGATGCTCCAGTACCGGCGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302824.7
ENST00000325346.6
ENST00000559913.1
ENST00000560156.1
ENST00000560723.5
CDS GCA 90 bp CCCGCCCAGCTCCTCACTCACGCCTTCCCGGCAAATCTTCCAGCCTaGTGTGTCCCGCCGGTACTGGAGCATCTTCTCGGCCACAGCCTC +
Preference number: 5 (lower is better)
Translates to: PAQLLTHAFPANLPA*CVPPVLEHLLGHSL
Trigger: GAGGCTGTGGCCGAGAAGATGCTCCAGTACCGGCGGGACACAGCAGGCTGGAAGATTTGCCGGGAAGGCGTGAGTGAGGAGCTGGGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559913.1
ENST00000560156.1
ENST00000560723.5
CDS CCA 90 bp ACGCCTTCCCGGCAAATCTTCCAGCCTGCTGTGTCCCGCCGGTACTaGAGCATCTTCTCGGCCACAGCCTCGCTCATCTGGGCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: TPSRQIFQPAVSRRY*SIFSATASLIWAAS
Trigger: GCTGGCAGCCCAGATGAGCGAGGCTGTGGCCGAGAAGATGCTCCAGTACCGGCGGGACACAGCAGGCTGGAAGATTTGCCGGGAAGGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325346.6
ENST00000559913.1
ENST00000560156.1
ENST00000560723.5
CDS CCA 90 bp TTGCCTTCCCGGCAAATCTTCCAGCCTGCTGTGTCCCGCCGGTACTaGAGCATCTTCTCGGCCACAGCCTCGCTCATCTGGGCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: LPSRQIFQPAVSRRY*SIFSATASLIWAAS
Trigger: GCTGGCAGCCCAGATGAGCGAGGCTGTGGCCGAGAAGATGCTCCAGTACCGGCGGGACACAGCAGGCTGGAAGATTTGCCGGGAAGGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp CCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCCAACACCAGCGCCGGGTCCATaGCGTCGGGAGCTGCGCTTA +
Preference number: 5 (lower is better)
Translates to: PKSEHRPLRAPRLLGVPTPAPGP*RRELRL
Trigger: TAAGCGCAGCTCCCGACGCAATGGACCCGGCGCTGG...TGTTGGGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS GCA 90 bp ACAATGCCTTCTCCTCGGTACGCCTTCCCGGCAAATCTTCCAGCCTaGTGTGTCCCGCCGGTACTGGAGCATCTTCTCGGCCACAGCCTC +
Preference number: 5 (lower is better)
Translates to: TMPSPRYAFPANLPA*CVPPVLEHLLGHSL
Trigger: GAGGCTGTGGCCGAGAAGATGCTCCAGTACCGGCGGGACACAGCAGGCTGGAAGATTTGCCGGGAAGGCGTACCGAGGAGAAGGCATTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CAA 90 bp CCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCCAACAGGCTGCCGCCTCTGGTaGGCATTCTCAGAGATGCGC +
Preference number: 5 (lower is better)
Translates to: PKSEHRPLRAPRLLGVPTGCRLW*AFSEMR
Trigger: GCGCATCTCTGAGAATGCCAACCAGAGGCGGCAGCC...TGTTGGGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CAA 90 bp GGTGGGCTGCCGCCTCTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTTGTCCACATGGGTGGCGTaGGAACTGATGGTCCCATCC +
Preference number: 5 (lower is better)
Translates to: GGLPPLVGILRDAQSISLSTWVA*ELMVPS
Trigger: GGATGGGACCATCAGTTCCAACGCCACCCATGTGGA...CAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAGCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CAA 90 bp TTGTTCCAAAGAGTGAACACAGGCCTCTGCGTGCTCCCAGGCTCCTTGGTGTCCATAGGTGGCCTCTCCTaGTGGCCTGGGCCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: LFQRVNTGLCVLPGSLVSIGGLS*WPGPPH
Trigger: GTGAGGAGGCCCAGGCCACAAGGAGAGGCCACCTAT...GGACACCAAGGAGCCTGGGAGCACGCAGAGGCCTGTGTTCACTCTTTGGAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp ACCAAGTCCACAAAATCTCTGGGAGAAATGAGCTTCATGGCAGCGGAGGGAGTGCCAGCGCCGGGTCCATaGCGTCGGGAGCTGCGCTTA +
Preference number: 5 (lower is better)
Translates to: TKSTKSLGEMSFMAAEGVPAPGP*RRELRL
Trigger: TAAGCGCAGCTCCCGACGCAATGGACCCGGCGCTGG...CACTCCCTCCGCTGCCATGAAGCTCATTTCTCCCAGAGATTTTGTGGACTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325346.6
ENST00000560156.1
CDS-3UTR CAA 90 bp AAAATCTCTGGGAGAAATGAGCTTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTCCAGCGCCGGGTCCATaGCGTCGGGAGCTGCGCTTA +
Preference number: 5 (lower is better)
Translates to: KISGRNELHGSGGSGGSAPAPGP*RRELRL
Trigger: TAAGCGCAGCTCCCGACGCAATGGACCCGGCGCTGG...AGCAGAACCTCCACTCCCTCCGCTGCCATGAAGCTCATTTCTCCCAGAGATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325346.6
ENST00000560156.1
CDS-3UTR CAA 90 bp ATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACGTGACCAGGTTGGTCTaGGTGGGTTCCCCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: IAWCPGRVSVRWLEAWVYVTRLV*VGSPGR
Trigger: TCTTCCAGGGGAACCCACCAAGACCAACCTGGTCAC...GTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CAA 90 bp GAACACATGAATGGCTCATCACACGCCAACCCTGAGTGGGGCAGGAGGCAGGAACCAGGAGAGGCGTGTTaGGGTAACAGGCAGATGGAG +
Preference number: 5 (lower is better)
Translates to: EHMNGSSHANPEWGRRQEPGEAC*GNRQME
Trigger: CTCCATCTGCCTGTTACCCAAACACGCCTCTCCTGG...TTCCTGCCTCCTGCCCCACTCAGGGTTGGCGTGTGATGAGCCATTCATGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CAA 90 bp GTTGGCATAAAACCGGGTCATGCTGCGGGGGAAGAAGGAGTCCACCACGTTCTGCCAGGAGAGGCGTGTTaGGGTAACAGGCAGATGGAG +
Preference number: 5 (lower is better)
Translates to: VGIKPGHAAGEEGVHHVLPGEAC*GNRQME
Trigger: CTCCATCTGCCTGTTACCCAAACACGCCTCTCCTGG...CAGAACGTGGTGGACTCCTTCTTCCCCCGCAGCATGACCCGGTTTTATGCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CAA 90 bp ATGGGCAGCTCATCTCTGTCCCACTTGGCATCAGCTGGCGTCATGCAAAGTCATGCCTGGGCCAGAGTATaGGTCTCCTCTCAGCCCCTG +
Preference number: 5 (lower is better)
Translates to: MGSSSLSHLASAGVMQSHAWARV*VSSQPL
Trigger: CAGGGGCTGAGAGGAGACCAATACTCTGGCCCAGGC...ATGACTTTGCATGACGCCAGCTGATGCCAAGTGGGACAGAGATGAGCTGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp TGGTGTCCCAACAGCTGGAGCTCCTCGATGAGTCACGGGAGTTCTTTGCCAAGAAACAACCAGCATCCCTaGACCAGGCCTGGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: WCPNSWSSSMSHGSSLPRNNQHP*TRPGPE
Trigger: CTCTGGCCCAGGCCTGGTCAAGGGATGCTGGTTGTT...TCTTGGCAAAGAACTCCCGTGACTCATCGAGGAGCTCCAGCTGTTGGGACACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp CCAGCATCCCTTGACCAGGCCTGGGCCAGAGTATTGGTCTCCTCTCAGCCCCTGCCATCCTCATATCTCTaGACTAGCACCAAGTCCACA +
Preference number: 5 (lower is better)
Translates to: PASLDQAWARVLVSSQPLPSSYL*TSTKST
Trigger: TGTGGACTTGGTGCTAGTCAAGAGATATGAGGATGG...CAGGGGCTGAGAGGAGACCAATACTCTGGCCCAGGCCTGGTCAAGGGATGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp GCCTTGGTGCCAGAGTGCATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGGTACCAAGAGACTCCTaGAGAGACCAGGCAAAGCAA +
Preference number: 5 (lower is better)
Translates to: ALVPECIAWCPGRVSVRWVPRDS*RDQAKQ
Trigger: TTGCTTTGCCTGGTCTCTCAAGGAGTCTCTTGGTAC...CCATCTGACAGAGACTCGGCCTGGACACCATGCGATGCACTCTGGCACCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp CCAGCATCCCTTGACCAGGCCTGGGCCAGAGTATTGGTCTCCTCTCAGCCCCTGTGGCCAAAGGGATATTaGGTTTGGCCATCTCTGGAT +
Preference number: 5 (lower is better)
Translates to: PASLDQAWARVLVSSQPLWPKGY*VWPSLD
Trigger: ATCCAGAGATGGCCAAACCAAATATCCCTTTGGCCA...CAGGGGCTGAGAGGAGACCAATACTCTGGCCCAGGCCTGGTCAAGGGATGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp ATGGGCAGCTCATCTCTGTCCCACTTGGCATCAGCTGGCGTCATGCAAAGTCATGTGACCAGGTTGGTCTaGGTGGGTTCCCCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: MGSSSLSHLASAGVMQSHVTRLV*VGSPGR
Trigger: TCTTCCAGGGGAACCCACCAAGACCAACCTGGTCAC...ATGACTTTGCATGACGCCAGCTGATGCCAAGTGGGACAGAGATGAGCTGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp GTTGGCATAAAACCGGGTCATGCTGCGGGGGAAGAAGGAGTCCACCACGTTCTGAAGAATGTGACCAGGTaGGTCTTGGTGGGTTCCCCT +
Preference number: 5 (lower is better)
Translates to: VGIKPGHAAGEEGVHHVLKNVTR*VLVGSP
Trigger: AGGGGAACCCACCAAGACCAACCTGGTCACATTCTT...CAGAACGTGGTGGACTCCTTCTTCCCCCGCAGCATGACCCGGTTTTATGCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CAA 90 bp CGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACCCGGAAACGTTTTCTGTTaGGAGGAGCAAAGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: RMVSRPSLCQMVRGLGLPGNVFC*EEQRLR
Trigger: TCTCAGCCTTTGCTCCTCCAAACAGAAAACGTTTCC...GGGTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp CCTCAGAGTATGGAGCTCAGAGAGGGCAGGCATGAAGTTTCCTTGGCTGGTGCATGGCTGGCCTTCCACTaGGCTACACAGGGATGTACA +
Preference number: 5 (lower is better)
Translates to: PQSMELREGRHEVSLAGAWLAFH*ATQGCT
Trigger: TGTACATCCCTGTGTAGCCAAGTGGAAGGCCAGCCA...TGCACCAGCCAAGGAAACTTCATGCCTGCCCTCTCTGAGCTCCATACTCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp CTGCCGCCTCTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTTGTTCCAAGAGATGCATTCTTGGTaGGCTGGCCTTCCACTTGGC +
Preference number: 5 (lower is better)
Translates to: LPPLVGILRDAQSISLFQEMHSW*AGLPLG
Trigger: GCCAAGTGGAAGGCCAGCCAACCAAGAATGCATCTC...TTGGAACAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp GGCAGCGGAGGGAGTGGAGGTTCTGCTTACACACAGGGTGTCAGTGATGCTTTGGCGCAGTCCATCAGCTaGTTCCAAAGAGTGAACACA +
Preference number: 5 (lower is better)
Translates to: GSGGSGGSAYTQGVSDALAQSIS*FQRVNT
Trigger: TGTGTTCACTCTTTGGAACAAGCTGATGGACTGCGC...CAAAGCATCACTGACACCCTGTGTGTAAGCAGAACCTCCACTCCCTCCGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CAA 90 bp CATAAAACCGGGTCATGCTGCGGGGGAAGAAGGAGTCCACCACGTTCTGTGGGACCATCCTCATATCTCTaGACTAGCACCAAGTCCACA +
Preference number: 5 (lower is better)
Translates to: HKTGSCCGGRRSPPRSVGPSSYL*TSTKST
Trigger: TGTGGACTTGGTGCTAGTCAAGAGATATGAGGATGG...TCCCACAGAACGTGGTGGACTCCTTCTTCCCCCGCAGCATGACCCGGTTTTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CAA 90 bp CTGCCGCCTCTGGTTGGCATTCTCAGAGATGCGCAGTCCATCAGCTTGTTCCAAGCGCAGTCCATCAGCTaGTTCCAAAGAGTGAACACA +
Preference number: 5 (lower is better)
Translates to: LPPLVGILRDAQSISLFQAQSIS*FQRVNT
Trigger: TGTGTTCACTCTTTGGAACAAGCTGATGGACTGCGC...TTGGAACAAGCTGATGGACTGCGCATCTCTGAGAATGCCAACCAGAGGCGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CAA 90 bp GCAATGTGGGCAGAGATTGGAATGGGCAGCTCATCTCTGTCCCACTTGGCATCAATGGCCCCTGTGAGTTaGTACAGTCTTGCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: AMWAEIGMGSSSLSHLASMAPVS*YSLAAG
Trigger: TCCTGCTGCAAGACTGTACAAACTCACAGGGGCCAT...TGATGCCAAGTGGGACAGAGATGAGCTGCCCATTCCAATCTCTGCCCACATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp GAACACATGAATGGCTCATCACACGCCAACCCTGAGTGGGGCAGGAGGCAGGAACTGGTGCACCTAGAATaGGCTGAACTCATGAGAAGT +
Preference number: 5 (lower is better)
Translates to: EHMNGSSHANPEWGRRQELVHLE*AELMRS
Trigger: ACTTCTCATGAGTTCAGCCAATTCTAGGTGCACCAG...TTCCTGCCTCCTGCCCCACTCAGGGTTGGCGTGTGATGAGCCATTCATGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp GCAATGTGGGCAGAGATTGGAATGGGCAGCTCATCTCTGTCCCACTTGGCATCATGTTCAAGAGCACACTaGGCCCAAGTGGCAGAGCTT +
Preference number: 5 (lower is better)
Translates to: AMWAEIGMGSSSLSHLASCSRAH*AQVAEL
Trigger: AAGCTCTGCCACTTGGGCCAAGTGTGCTCTTGAACA...TGATGCCAAGTGGGACAGAGATGAGCTGCCCATTCCAATCTCTGCCCACATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp CGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACCCCCCTACTTCTTTGCTTaGCCCAGCATTTTACTGATT +
Preference number: 5 (lower is better)
Translates to: RMVSRPSLCQMVRGLGLPPYFFA*PSILLI
Trigger: AATCAGTAAAATGCTGGGCAAAGCAAAGAAGTAGGG...GGGTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGGCCTGGACACCATGCG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp CCGAGTCTCTGTCAGATGGTTAGAGGCCTGGGTCTACCCTGCCAGGAGAGGCGTTGCTGGTTAACTTGTTaGGCCTATTCCATTCTGGAT +
Preference number: 5 (lower is better)
Translates to: PSLCQMVRGLGLPCQERRCWLTC*AYSILD
Trigger: ATCCAGAATGGAATAGGCCAAACAAGTTAACCAGCA...ACGCCTCTCCTGGCAGGGTAGACCCAGGCCTCTAACCATCTGACAGAGACTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp GCCTTGGTGCCAGAGTGCATCGCATGGTGTCCAGGCCGAGTCTCTGTCAGATGGATCTTGTTTATACCTTaGCCTTGGAAGTTGCATGGC +
Preference number: 5 (lower is better)
Translates to: ALVPECIAWCPGRVSVRWILFIP*PWKLHG
Trigger: GCCATGCAACTTCCAAGGCAAAGGTATAAACAAGAT...CCATCTGACAGAGACTCGGCCTGGACACCATGCGATGCACTCTGGCACCAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp TCTACCCTGCCAGGAGAGGCGTGTTTGGGTAACAGGCAGATGGAGTTTGGAACAGGCAGCCCTACTTCTTaGCTTTGCCCAGCATTTTAC +
Preference number: 5 (lower is better)
Translates to: STLPGEACLGNRQMEFGTGSPTS*LCPAFY
Trigger: GTAAAATGCTGGGCAAAGCAAAGAAGTAGGGCTGCC...TGTTCCAAACTCCATCTGCCTGTTACCCAAACACGCCTCTCCTGGCAGGGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp ATGGGCAGCTCATCTCTGTCCCACTTGGCATCAGCTGGCGTCATGCAAAGTCATGAAACTGAAACTCCATaGCCTTCCCGGCAAATCTTC +
Preference number: 5 (lower is better)
Translates to: MGSSSLSHLASAGVMQSHETETP*PSRQIF
Trigger: GAAGATTTGCCGGGAAGGCAATGGAGTTTCAGTTTC...ATGACTTTGCATGACGCCAGCTGATGCCAAGTGGGACAGAGATGAGCTGCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp GAACACATGAATGGCTCATCACACGCCAACCCTGAGTGGGGCAGGAGGCAGGAAGGTGTCAGTGATGCTTaGGATAATTTCAAAACCGGT +
Preference number: 5 (lower is better)
Translates to: EHMNGSSHANPEWGRRQEGVSDA*DNFKTG
Trigger: ACCGGTTTTGAAATTATCCAAAGCATCACTGACACC...TTCCTGCCTCCTGCCCCACTCAGGGTTGGCGTGTGATGAGCCATTCATGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302824.7
ENST00000325346.6
CDS-3UTR CAA 90 bp ATCTCTGGGAGAAATGAGCTTCATGGCAGCGGAGGGAGTGGAGGTTCTGCTTACAGTCACGGGAGTTCTTaGCCAAGAAGTAACGATAGC +
Preference number: 5 (lower is better)
Translates to: ISGRNELHGSGGSGGSAYSHGSS*PRSNDS
Trigger: GCTATCGTTACTTCTTGGCAAAGAACTCCCGTGACT...GTAAGCAGAACCTCCACTCCCTCCGCTGCCATGAAGCTCATTTCTCCCAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CAA 90 bp ATGGGCAGCTCATCTCTGTCCCACTTGGCATCAGCTGGCGTCATGCAAAGTCATGGATCCCTCTCTGGATaGGAGATAGGGAAAGAAAGT +
Preference number: 5 (lower is better)
Translates to: MGSSSLSHLASAGVMQSHGSLSG*EIGKES
Trigger: ACTTTCTTTCCCTATCTCCAATCCAGAGAGGGATCC...ATGACTTTGCATGACGCCAGCTGATGCCAAGTGGGACAGAGATGAGCTGCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp TCGATGAGTCACGGGAGTTCTTTGCCAAGAAGTAACGATAGCATTACTCATGGATCCACATGGGTGGCGTaGGAACTGATGGTCCCATCC +
Preference number: 5 (lower is better)
Translates to: SMSHGSSLPRSNDSITHGSTWVA*ELMVPS
Trigger: GGATGGGACCATCAGTTCCAACGCCACCCATGTGGA...TCCATGAGTAATGCTATCGTTACTTCTTGGCAAAGAACTCCCGTGACTCATCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS-3UTR CAA 90 bp TCCACTCCCAGGCAGCCCTACTTCTTTGCTTTGCCCAGCATTTTACTGATTCATAAGAATGTGACCAGGTaGGTCTTGGTGGGTTCCCCT +
Preference number: 5 (lower is better)
Translates to: STPRQPYFFALPSILLIHKNVTR*VLVGSP
Trigger: AGGGGAACCCACCAAGACCAACCTGGTCACATTCTT...ATGAATCAGTAAAATGCTGGGCAAAGCAAAGAAGTAGGGCTGCCTGGGAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp GAGATAGGGAAAGAAAGTTGCACGGCTGCTGAGGCCCCTTCTAGGTGGCAAGGCACTTGGAGGCACCATTaGTATCCACTTTTTAGACTT +
Preference number: 5 (lower is better)
Translates to: EIGKESCTAAEAPSRWQGTWRHH*YPLFRL
Trigger: AAGTCTAAAAAGTGGATACAAATGGTGCCTCCAAGT...GCCTTGCCACCTAGAAGGGGCCTCAGCAGCCGTGCAACTTTCTTTCCCTATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp CCTGGGGTACCAAGAGACTCCTTGAGAGACCAGGCAAAGCAAGTGATTGGGACAGTCCTGCTGGTTAACTaGTTTGGCCTATTCCATTCT +
Preference number: 5 (lower is better)
Translates to: PGVPRDSLRDQAKQVIGTVLLVN*FGLFHS
Trigger: AGAATGGAATAGGCCAAACAAGTTAACCAGCAGGAC...TGTCCCAATCACTTGCTTTGCCTGGTCTCTCAAGGAGTCTCTTGGTACCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp GGCTTAGAGCAGTTTCTGTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGTGGAGGGCACATTCCTaGCCTGCACAAACTCACCAT +
Preference number: 5 (lower is better)
Translates to: GLEQFLSCWLTCLAYSILWRAHS*PAQTHH
Trigger: ATGGTGAGTTTGTGCAGGCAAGGAATGTGCCCTCCA...CAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGACAGAAACTGCTCTAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp GGGAGTGGAGGTTCTGCTTACACACAGGGTGTCAGTGATGCTTTGGATAATTTCCCATCCTCATATCTCTaGACTAGCACCAAGTCCACA +
Preference number: 5 (lower is better)
Translates to: GSGGSAYTQGVSDALDNFPSSYL*TSTKST
Trigger: TGTGGACTTGGTGCTAGTCAAGAGATATGAGGATGG...GAAATTATCCAAAGCATCACTGACACCCTGTGTGTAAGCAGAACCTCCACTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325346.6
ENST00000560156.1
CDS-3UTR CAA 90 bp GCAATGTGGGCAGAGATTGGAATGGGCAGCTCATCTCTGTCCCACTTGGCATCAATTCCATTCTGGATTTaGTCAAGCAGTAGACAAGCA +
Preference number: 5 (lower is better)
Translates to: AMWAEIGMGSSSLSHLASIPFWI*SSSRQA
Trigger: TGCTTGTCTACTGCTTGACAAAATCCAGAATGGAAT...TGATGCCAAGTGGGACAGAGATGAGCTGCCCATTCCAATCTCTGCCCACATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp ATGATTCTCTATGACAGTCAGGGAAACGTGGTCTCTGAGAGTGATGGGCACATAAAAGGGATATTTGGTTaGGCCATCTCTGGATGCCTG +
Preference number: 5 (lower is better)
Translates to: MILYDSQGNVVSESDGHIKGIFG*AISGCL
Trigger: CAGGCATCCAGAGATGGCCAAACCAAATATCCCTTT...TATGTGCCCATCACTCTCAGAGACCACGTTTCCCTGACTGTCATAGAGAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp GGCTTAGAGCAGTTTCTGTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGGTTTATACCTTTGCCTaGGAAGTTGCATGGCATCAC +
Preference number: 5 (lower is better)
Translates to: GLEQFLSCWLTCLAYSILVYTFA*EVAWHH
Trigger: GTGATGCCATGCAACTTCCAAGGCAAAGGTATAAAC...CAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGACAGAAACTGCTCTAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp GTCCTGCTGGTTAACTTGTTTGGCCTATTCCATTCTGGATTTTGTCAAGCAGTACAATTAGACAAGAACTaGGAGGCACCATTTGTATCC +
Preference number: 5 (lower is better)
Translates to: VLLVNLFGLFHSGFCQAVQLDKN*EAPFVS
Trigger: GGATACAAATGGTGCCTCCAAGTTCTTGTCTAATTG...TACTGCTTGACAAAATCCAGAATGGAATAGGCCAAACAAGTTAACCAGCAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS-3UTR CAA 90 bp ATTCCATTCTGGATTTTGTCAAGCAGTAGACAAGCAATTAGACAAGAACTTGGAAGTCACGGGAGTTCTTaGCCAAGAAGTAACGATAGC +
Preference number: 5 (lower is better)
Translates to: IPFWILSSSRQAIRQELGSHGSS*PRSNDS
Trigger: GCTATCGTTACTTCTTGGCAAAGAACTCCCGTGACT...TCCAAGTTCTTGTCTAATTGCTTGTCTACTGCTTGACAAAATCCAGAATGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302824.7
CDS TCA 72 bp CGGGAGCTGCGCTTAGCTGCGGGGTCGCGGGTGTTATaGGCGGCGGCGCTGGATCCCGGGTGCCTGGAGGCT +
Preference number: 6 (lower is better)
Translates to: RELRLAAGSRVL*AAALDPGCLEA
Trigger: AGCCTCCAGGCACCCGGGATCCAGCGCCGCCGCTCATAACACCCGCGACCCCGCAGCTAAGCGCAGCTCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS CAA 72 bp CAGCCTCGCTCATCTGGGCTGCCAGCGCCGGGTCCATaGCGTCGGGAGCTGCGCTTAGCTGCGGGGTCGCGG +
Preference number: 6 (lower is better)
Translates to: QPRSSGLPAPGP*RRELRLAAGSR
Trigger: CCGCGACCCCGCAGCTAAGCGCAGCTCCCGACGCAATGGACCCGGCGCTGGCAGCCCAGATGAGCGAGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302824.7
ENST00000325346.6
ENST00000559913.1
ENST00000560156.1
ENST00000560723.5
CDS GCA 72 bp AGCGCCGGGTCCATTGCGTCGGGAGCTGCGCTTAGCTaGGGGGTCGCGGGTGTTATGAGCGGCGGCGCTGGA +
Preference number: 6 (lower is better)
Translates to: SAGSIASGAALS*GVAGVMSGGAG
Trigger: TCCAGCGCCGCCGCTCATAACACCCGCGACCCCGCAGCTAAGCGCAGCTCCCGACGCAATGGACCCGGCGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS CCA 72 bp TACTGGAGCATCTTCTCGGCCACAGCCTCGCTCATCTaGGCTGCCAGCGCCGGGTCCATTGCGTCGGGAGCT +
Preference number: 6 (lower is better)
Translates to: YWSIFSATASLI*AASAGSIASGA
Trigger: AGCTCCCGACGCAATGGACCCGGCGCTGGCAGCCCAGATGAGCGAGGCTGTGGCCGAGAAGATGCTCCAGTA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302824.7
ENST00000325346.6
ENST00000559913.1
ENST00000560156.1
ENST00000560723.5
CDS GCA 72 bp TCTCCTCGGTACGCCTTCCCGGCAAATCTTCCAGCCTaGTGTGTCCCGCCGGTACTGGAGCATCTTCTCGGC +
Preference number: 6 (lower is better)
Translates to: SPRYAFPANLPA*CVPPVLEHLLG
Trigger: GCCGAGAAGATGCTCCAGTACCGGCGGGACACAGCAGGCTGGAAGATTTGCCGGGAAGGCGTACCGAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325346.6
CDS GCA 72 bp CTCCTCACTCACGCCTTCCCGGCAAATCTTCCAGCCTaGTGTGTCCCGCCGGTACTGGAGCATCTTCTCGGC +
Preference number: 6 (lower is better)
Translates to: LLTHAFPANLPA*CVPPVLEHLLG
Trigger: GCCGAGAAGATGCTCCAGTACCGGCGGGACACAGCAGGCTGGAAGATTTGCCGGGAAGGCGTGAGTGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559913.1
ENST00000560156.1
ENST00000560723.5
CDS CCA 72 bp CGGCAAATCTTCCAGCCTGCTGTGTCCCGCCGGTACTaGAGCATCTTCTCGGCCACAGCCTCGCTCATCTGG +
Preference number: 6 (lower is better)
Translates to: RQIFQPAVSRRY*SIFSATASLIW
Trigger: CCAGATGAGCGAGGCTGTGGCCGAGAAGATGCTCCAGTACCGGCGGGACACAGCAGGCTGGAAGATTTGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302824.7
ENST00000325346.6
ENST00000559913.1
ENST00000560156.1
ENST00000560723.5
CDS GCA 72 bp CCATCAGTTAGAGCTGACACAAACCTGCCTACCACATaGCAAGCACTGTGCTCAGGGCTAAACGGGCATTGC +
Preference number: 6 (lower is better)
Translates to: PSVRADTNLPTT*QALCSGLNGHC
Trigger: GCAATGCCCGTTTAGCCCTGAGCACAGTGCTTGGCATGTGGTAGGCAGGTTTGTGTCAGCTCTAACTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560916.1
CDS CAA 72 bp CTGTGCAACCCATACGTGGAAAAGCTGGGACTAGTCTaGGGCAAAGCTGTCCCCACAGCAGAATGTGATGAA +
Preference number: 6 (lower is better)
Translates to: LCNPYVEKLGLV*GKAVPTAECDE
Trigger: TTCATCACATTCTGCTGTGGGGACAGCTTTGCCCAAGACTAGTCCCAGCTTTTCCACGTATGGGTTGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560723.5